BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043284
(527 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/524 (72%), Positives = 448/524 (85%), Gaps = 4/524 (0%)
Query: 6 HQKITAPSCLLQS--IGGARCSL-STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQ 62
H+ T LL S G L + TVTPPIKPWPQRLYPKRLVSMI RQQNLDLALQ
Sbjct: 20 HRPKTTAVALLHSNSTGSPNNPLPESYTVTPPIKPWPQRLYPKRLVSMITRQQNLDLALQ 79
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
IF YAGK+ PNFSHNYDTY SIIHKL+RAR F VE LL++L ++ +IKCGEN+FI VIR
Sbjct: 80 IFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKS-QIKCGENIFINVIR 138
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
NYGLAG+P+ A++TF+RI+ FNVQRSVRSLNTLLNA VQNKRYDLVH MFKN R K+ V+
Sbjct: 139 NYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVL 198
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNVFTCNILIKALCKK+DVE A++VLDEMP+MGM+PN+VT+TTILGGY RGD+ NA +V
Sbjct: 199 PNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKV 258
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
FG++ DRGW+PDATTYT+LM+GY + GRL DA+K+MD+M +NGVEPNEVTYGVM+EA+CK
Sbjct: 259 FGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCK 318
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
KK+GEARNLLDDML+R+YVPSSALCCKVID+LCE GK+E+ACELWKR+L+KNCMPDNAI
Sbjct: 319 EKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAI 378
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
ST+IHWLCKEGK+WEA+KLF EFERG+IPSLLTYNTLIAGMCE EL+EAG+LWDDM+E
Sbjct: 379 MSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMME 438
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KG +PN FTYNMLI+GF KIGNAKEGIRILEEMLD C PNK+++++LIE L + G EGE
Sbjct: 439 KGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGE 498
Query: 483 VGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKN 526
V KVVSMA ASG V+SDSW+ L + V +LD G+ ALD +N
Sbjct: 499 VDKVVSMAMASGGVDSDSWDLFLNKAVGNLDRGSKALDSFFKEN 542
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/498 (72%), Positives = 427/498 (85%), Gaps = 2/498 (0%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 89
TVTPPIKPWPQRLYPKRL+SMI Q+NLDLA QIF YAGK+HP FSH YDTYHSII KL+
Sbjct: 1 TVTPPIKPWPQRLYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLS 60
Query: 90 RARAFDAVESLLTELKQNP-EIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQR 147
RARAFD VESLL++L +N IKCG+++FI+VIRNYGLAGRP LA+KTF RI E+F++Q
Sbjct: 61 RARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQP 120
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV+ LNTLLN VQNKRY LV KN + K+ V+PNVF+ NILIKALCKK+DVE A++V
Sbjct: 121 SVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKV 180
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
DEMP+MGM+PNLVT+TTILGG+V RGD+ NA++VF +I D+GW+PDATTYTVLM GY K
Sbjct: 181 FDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCK 240
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GRL+DA+KVMD ME NGVEPNEVTYGVMI+A+CK KKSGEARNL+DDML +K++PSS L
Sbjct: 241 QGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTL 300
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
CCKVID+LCE+GKVE+AC LWKR+L KNC+PDNAI ST+IHWLCKEGK+WEA+KLFDEFE
Sbjct: 301 CCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFE 360
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+G+IPSL+TYNTLIAGMCE EL EAGRLWDDMVEK PN FTYNMLI+GF K G KE
Sbjct: 361 QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKE 420
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR 507
G+RILEEMLD GC PNK++++LLIEGL ESG EG+V KV+SMA AS V++DSW+ L +
Sbjct: 421 GVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMASREVDADSWDLFLHK 480
Query: 508 IVSDLDSGAGALDELLVK 525
IV +LD G GALD LL++
Sbjct: 481 IVGNLDCGTGALDRLLME 498
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/513 (69%), Positives = 437/513 (85%), Gaps = 3/513 (0%)
Query: 16 LQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
L ++ L + TVTPPIKPWPQRL PKR+VSMI RQQNLDLALQIF +AGKFH NF+
Sbjct: 73 LAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFA 132
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
HNY+TY ++I KL++ARAF+ +E+L+++L ++ +IKCGENLFITVIRNYG AGRP+LA++
Sbjct: 133 HNYETYLAMIEKLSKARAFEPMETLISQLHKS-QIKCGENLFITVIRNYGFAGRPKLAIR 191
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
TFLRI F +Q SVRS NTLLN LVQNKR+DLVHLMFKN R KF +VPNVFTCNIL+KAL
Sbjct: 192 TFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKAL 251
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CKK+D++ AIRVL+EMP+MG +PN+VT+TTILGGYV +GD+ A+RVFG+ILDRGWVPD
Sbjct: 252 CKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDP 311
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TTYT+LMDGY K GR DAVKVMDEME+N VEPN+VTYGV+IEA+CK KKSGE NLLDD
Sbjct: 312 TTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD 371
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML++KY+PSSALCC+VID+LCEEGKVE ACELWK+LL+KNC PDNAI+ST+IHWLCKEGK
Sbjct: 372 MLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGK 431
Query: 376 IWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+WEA+KLFDEFE+GSIPS LTYN LIAGMCE EL EA RLWD+MVEKG PN FTYNML
Sbjct: 432 VWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I+GFCK+GNA+EGIR++EEMLD GC PNK ++++L+EGLYE G EGEV V+SMA++ G
Sbjct: 492 IKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRGG 551
Query: 496 VESDSWNFLLTRIVS--DLDSGAGALDELLVKN 526
V+++ W L + V+ ++D +D +LV++
Sbjct: 552 VDAECWGVFLAKFVNGGNIDVEGAKIDRILVES 584
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/505 (69%), Positives = 429/505 (84%), Gaps = 1/505 (0%)
Query: 16 LQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
L ++ L + TVTPPIKPWPQRL PKR+VSMI RQQNLDLALQIF +AGKFH NF+
Sbjct: 73 LAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFA 132
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
HNY+TY ++I KL++ARAF+ +E+L+++L ++ +IKCGENLFITVIRNYG AGRP+LA++
Sbjct: 133 HNYETYLAMIEKLSKARAFEPMETLISQLHKS-QIKCGENLFITVIRNYGFAGRPKLAIR 191
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
TFLRI F +Q SVRS NTLLN LVQNKR+DLVHLMFKN R KF +VPNVFTCNIL+KAL
Sbjct: 192 TFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKAL 251
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CKK+D++ AIRVL+EMP+MG +PN+VT+TTILGGYV +GD+ A+RVFG+ILDRGWVPD
Sbjct: 252 CKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDP 311
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TTYT+LMDGY K GR DAVKVMDEME+N VEPN+VTYGV+IEA+CK KKSGE NLLDD
Sbjct: 312 TTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD 371
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML++KY+PSSALCC+VID+LCEEGKVE ACELWK+LL+KNC PDNAI+ST+IHWLCKEGK
Sbjct: 372 MLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGK 431
Query: 376 IWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+WEA+KLFDEFE+GSIPS LTYN LIAGMCE EL EA RLWD+MVEKG PN FTYNML
Sbjct: 432 VWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I+GFCK+GNA+EGIR++EEMLD GC PNK ++++L+EGLYE G EGEV V+SMA++ G
Sbjct: 492 IKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRGG 551
Query: 496 VESDSWNFLLTRIVSDLDSGAGALD 520
V+++ W L + L G ++
Sbjct: 552 VDAECWGVFLAKTSQVLVVGGTCVN 576
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/510 (67%), Positives = 432/510 (84%), Gaps = 1/510 (0%)
Query: 16 LQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
L+ I L + TVTPPIKPWPQRL+P RLV+MI RQQNLDLALQIFHYAGK+HP F+
Sbjct: 24 LRFIFAVETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFT 83
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
HNYDTYH+II++L+RARAF+ VESLL EL Q+ I C E+LFITVIR+YGLA RP++A+K
Sbjct: 84 HNYDTYHAIIYRLSRARAFEPVESLLLEL-QDSGINCSEDLFITVIRSYGLASRPKMALK 142
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
TFLRI+ F V+RSVRSLNTLLNALVQN R+ VHL+FK S+ KF VVPNVFTCNILIKAL
Sbjct: 143 TFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKAL 202
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CKK+DVEGA +V DEMPSMG+VPN+VT+TTILGGYV RGD+ AKRVFG++ D GW+PDA
Sbjct: 203 CKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDA 262
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TTYT+LMDGY+K GR TDAVKVMDEME+NGVEPN++TYGV+I +CK +KSGEA NLL+D
Sbjct: 263 TTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLND 322
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML++KY+P+SALCCKVID+LC EG+V++AC++W++LL+KNC PDNAI+ST+IHWLCKEG
Sbjct: 323 MLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGN 382
Query: 376 IWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
IWEA+KLF+EFERG+I SLLTYNTLIAGMCE EL EA RLWDDM+EKG PN FTYNML
Sbjct: 383 IWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNML 442
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I+GF K+G AKE I+++EEMLDKGC N++++ +L+EGL + G E+ ++SM +SG+
Sbjct: 443 IKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGA 502
Query: 496 VESDSWNFLLTRIVSDLDSGAGALDELLVK 525
V+ +WN + VS+++ A L+++L++
Sbjct: 503 VDFKAWNLFVPHFVSNVNEQANILEKILIE 532
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/495 (68%), Positives = 411/495 (83%), Gaps = 1/495 (0%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 89
T PPIKPWPQRL+PKRLVSMI +QQN+DLALQIF YAGK HP F+HNYDTYHSI+ KL+
Sbjct: 35 TEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS 94
Query: 90 RARAFDAVESLLTELKQN-PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
RARAFD VESL+ +L+ + P IKCGENLFI ++RNYGLAGR E +++ FLRI F V+RS
Sbjct: 95 RARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRS 154
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
VRSLNTLLN L+QN+R+DLVH MFKNS+ F + PN+FTCN+L+KALCKK+D+E A +VL
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DE+PSMG+VPNLVT+TTILGGYV RGD+E+AKRV ++LDRGW PDATTYTVLMDGY KL
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR ++A VMD+ME N +EPNEVTYGVMI A CK KKSGEARN+ D+ML+R ++P S+LC
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
CKVID LCE+ KV++AC LW+++L+ NCMPDNA+ ST+IHWLCKEG++ EA+KLFDEFE+
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK 394
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
GSIPSLLTYNTLIAGMCE ELTEAGRLWDDM E+ +PN FTYN+LI+G K GN KEG
Sbjct: 395 GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRI 508
+R+LEEML+ GCFPNKT+F +L EGL + G E + K+VSMA +G V+ +SW L +
Sbjct: 455 VRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKKF 514
Query: 509 VSDLDSGAGALDELL 523
+LD G L ELL
Sbjct: 515 AGELDKGVLPLKELL 529
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/495 (67%), Positives = 410/495 (82%), Gaps = 1/495 (0%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 89
T P IKPWPQRL+PKRLVSMI +QQN+DLALQIF YAGK HP F+HNYDTYHSI+ KL+
Sbjct: 33 TEKPTIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS 92
Query: 90 RARAFDAVESLLTELKQN-PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
RARAFD VESL+ +L+ + P IKCGENLFI ++RNYGLAGR E +++ FLRI F V+RS
Sbjct: 93 RARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRS 152
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
VRSLNTLLN L+QN+R+DLVH MFKNS+ F + PN+FTCN+L+KALCKK+D+E A +VL
Sbjct: 153 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 212
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DE+P+MG+VPNLVT+TTILGGYV RGD+E+AKRV ++LDRGW PDA TYTVLMDGY KL
Sbjct: 213 DEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKL 272
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR ++A VMD+ME N +EPNEVTYGVMI A CK KKSGEARN+ D+ML R ++P S+LC
Sbjct: 273 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLC 332
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
CKVID LCE+ KV++AC LW+++L+ NCMPDNA+ ST+IHWLCKEG++ EA+KLFDEF++
Sbjct: 333 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDK 392
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
GSIPSLLTYNTLIAGMCE ELTEAGRLWDDM E+ +PN FTYN+LI+G K GN KEG
Sbjct: 393 GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEG 452
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRI 508
+R+LEEML+ GCFPNKT+F +L EGL + G E + K+VSMA +G V+ +SW L +
Sbjct: 453 VRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKVDKESWELFLNKF 512
Query: 509 VSDLDSGAGALDELL 523
V +LD G AL ELL
Sbjct: 513 VGELDKGVLALKELL 527
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/527 (58%), Positives = 400/527 (75%), Gaps = 5/527 (0%)
Query: 4 HLHQKITAPSCLLQSIGGARCSL-STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQ 62
H H+ TA S + + SL + + PPIKPWP RL PK L S+I RQ + +LQ
Sbjct: 8 HHHRFSTAISAAIVANTTTTPSLPQSYKIQPPIKPWPHRLNPKLLSSLISRQHDPHFSLQ 67
Query: 63 IFHYAGKFH-PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
IF +A H P FSHN TY +I KL++ R F +ESLL L+ +P CGE +TVI
Sbjct: 68 IFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSEIESLLAGLRSSPPHCCGEEPIVTVI 127
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
R YGLAG+P A+KTFLRIE F ++ SVRS+N LLN+LVQNKRY L L+FKN +F+V
Sbjct: 128 RGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRV 187
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+PNV +CNIL+KALCK ++VE A++VLDEMP MG+VPN+V++TT+LGG+VWRGD++ A +
Sbjct: 188 LPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMK 247
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF ++LDRGW PD T+YTVL+DG+ +LG+L DA++VMD MEDNGVEPNEVTYGVMI+A+C
Sbjct: 248 VFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYC 307
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K KKSGEA NL++DM+ + V S LCCKV+DLLCEEG VE ACE+W+ + RKNC + A
Sbjct: 308 KEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGA 367
Query: 362 -ISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ ST+IHWLCK+GK+ EA+ +FDEF +GS+ SLLTYNTLIAG+CE EL EA RLWDDM
Sbjct: 368 VVVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDM 427
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG-LYESGN 479
VEKGV PN FTYNMLI+GFCK+GNAKEGIR+LEEML+ C PNK+++++LI+G L G
Sbjct: 428 VEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGM 487
Query: 480 EGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKN 526
+ E+ KVVS+A ++G V++D WN + +V + + G LD +L++N
Sbjct: 488 KQEINKVVSLAMSTG-VDADLWNIFVKPVVGNDNGGEAELDRILLEN 533
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/501 (55%), Positives = 379/501 (75%), Gaps = 13/501 (2%)
Query: 27 STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIH 86
S+ + PPI PWP+RL P L S+I RQ + DL+LQIFH+A HP+ SH H++
Sbjct: 39 SSFRIQPPIYPWPRRLTPHNLASLISRQHDPDLSLQIFHHA---HPSLSHAPQPLHALFL 95
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQ 146
KL+RAR F +ESLLT L P T+IR YGLAG+P A++ FL+ + V
Sbjct: 96 KLSRARRFYHLESLLTHLPNPPPEP----PLTTLIRAYGLAGKPLSALRIFLKFQPLGV- 150
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
RSLN LLNALVQNKR+ L H +FK+S KF++VPNV +CNIL+KALCK+++V+ A+R
Sbjct: 151 ---RSLNALLNALVQNKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVR 207
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
VLDEM MG+VPN+V+++T+LGG+V++GD+E+A RVFG+ILD+GW+PD T+YTVLM G+
Sbjct: 208 VLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFC 267
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
+LG+L DA+++MD ME+N V+P+EVTYGVMIEA+CKG+K GEA NLL+DM+++ VPSS
Sbjct: 268 RLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSV 327
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
LCCKV+DLLCEEG VE ACE+W+ ++RK A+ STI+HWLCKEGK+ EA+ + DE
Sbjct: 328 LCCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDEL 387
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E+G + SL+TYNTLIAGMCE +L EAGRLWD+MVEKG PN FTYN+L++GFCK+G+ K
Sbjct: 388 EKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVK 447
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG-EVGKVVSMATASGSVESDSWNFLL 505
E IR+LEEM++ GC PNK++FS+L++G+ SG + E+ KVV +A +G V+ + W+ L
Sbjct: 448 EAIRVLEEMVESGCLPNKSTFSILVDGISLSGGKKEEIDKVVLLAMTTG-VDGEWWDLFL 506
Query: 506 TRIVSDLDSGAGALDELLVKN 526
+V +LD A LD +L +N
Sbjct: 507 KLVVGNLDGNASELDRILTEN 527
>gi|357486943|ref|XP_003613759.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515094|gb|AES96717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 733
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/341 (57%), Positives = 266/341 (78%), Gaps = 17/341 (4%)
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
CNIL+KALCK ++VE A++VLDEMP MG+VPN+V++TT+LGG+VWRGD++ A +VF ++L
Sbjct: 72 CNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVL 131
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
DRGW PD T+YTVL+DG+ +LG+L DA++VMD ME+NGVEPNE KSG
Sbjct: 132 DRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNE--------------KSG 177
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STI 366
EA NL++DM+ + V S LCCKV+D+LCEEG VE ACE+W+ + RKNC + A+ ST+
Sbjct: 178 EAVNLIEDMIAKDLVVGSELCCKVVDVLCEEGNVEKACEVWRMVSRKNCGLNGAVVVSTL 237
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
HWLCK+GK+ EA+ +FDEF +G + SLLTYNTLIAG+CE +L EA RLWD+MVEKGV
Sbjct: 238 THWLCKKGKVLEARNMFDEFGKGLVASLLTYNTLIAGLCEGGKLCEAARLWDEMVEKGVA 297
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGK 485
PN FTYNMLI+GFCK+ NAKEGIR+LEEML+ CFPNK+++++LI+G+ SG + E+ K
Sbjct: 298 PNAFTYNMLIKGFCKVRNAKEGIRVLEEMLENRCFPNKSTYTILIDGILLSGGMKQEINK 357
Query: 486 VVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKN 526
VVS+A ++G V++D WN + +V + D GA LD +L++N
Sbjct: 358 VVSLAMSTG-VDADLWNIFVKPVVGNDDGGAAELDRILLEN 397
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+V ++ T N LI LC+ + A R+ DEM G+ PN T+ ++ G+ + +
Sbjct: 261 LVASLLTYNTLIAGLCEGGKLCEAARLWDEMVEKGVAPNAFTYNMLIKGFCKVRNAKEGI 320
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV-KVMDEMEDNGVEPN 289
RV ++L+ P+ +TYT+L+DG + G + + KV+ GV+ +
Sbjct: 321 RVLEEMLENRCFPNKSTYTILIDGILLSGGMKQEINKVVSLAMSTGVDAD 370
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/487 (42%), Positives = 310/487 (63%), Gaps = 8/487 (1%)
Query: 27 STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYA-GKFHPNFSHNYDTYHSII 85
S TVTPP++PWP+RL P+ ++ R LA+ F +A + P + +++
Sbjct: 51 SHCTVTPPVQPWPRRLTPRSFSRLLLRLPTPQLAVLAFRHALFRATPPLPPTIPVFAAVL 110
Query: 86 HKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
+LA A D + +L+ L+ + F+ ++R L FL + FN
Sbjct: 111 SRLAGAPP-DLLPPVLSALRAAHLPAFSDRAFLPLLRALPPLPSLRL----FLSLPSFNS 165
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
SVRS N LL++LV +R L +F+ + K + P++ +CNIL+K L D++ A+
Sbjct: 166 HPSVRSFNALLHSLVAARRLRLAAALFRAAPTKLYITPDLVSCNILLKGLVGVRDLDAAL 225
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+VLDEMP G+VP++VT+TT+L Y + D++ A+++F DI+ G VPD T YTVL+DGY
Sbjct: 226 KVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGY 285
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+ G++ DA ++MDEME GV+PNEVTY V+IEA CK KS EA NL+ +ML + P +
Sbjct: 286 CRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDT 345
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
L KV+D++C++GK E+A ++W+ +++KN PDN I++T+I+WLCK G + EA+KLFDE
Sbjct: 346 PLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVREARKLFDE 405
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E+G PSLLTYN+LI+G+CE+ EL EAG++WDDMVE+ EPN TY LI+GFCKIG
Sbjct: 406 LEKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIKGFCKIGKP 465
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS--VESDSWNF 503
EG + EM+ KGC P+K + +L++ L E ++ V +V A SG ++ DSW
Sbjct: 466 DEGAAVFTEMVTKGCAPSKVLYQVLVDSLSEPIHDDIVDNIVQTAALSGRDFLDGDSWEI 525
Query: 504 LLTRIVS 510
+ R+++
Sbjct: 526 FIRRVLN 532
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/514 (40%), Positives = 311/514 (60%), Gaps = 32/514 (6%)
Query: 27 STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLAL-----QIFHYAGKFHPNFSHNYDTY 81
S TVTPP++PWP+RL + L ++ +LA+ +FH A P+ +
Sbjct: 42 SGYTVTPPVQPWPRRLTARSLSRLLLGAATPELAVLALRHALFHAAHPLPPSLP----VF 97
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP----------E 131
+ + +L+ A A A L L + R + RP
Sbjct: 98 AAALSRLSHADAGAAARHLPPVLS-----------LLRASRLPAFSDRPFLPLLRALRPL 146
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+++ FL + FN + S RS N LL++LV +R L +F+ + K + PN+ +CNIL
Sbjct: 147 PSLRLFLSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNIL 206
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+K L D+ A++VLDEM G+VP++VT+TT+L Y +GD+E A+++F DI+ G
Sbjct: 207 LKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGR 266
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PDAT YTVL+DGY +L DA ++MDEM GV+PNEVTY V+IEA CK +KS EAR+
Sbjct: 267 RPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARD 326
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +ML YVP + LC KV+D+LC++GK +A E+W+++++K+ PDN + ST+I+WLC
Sbjct: 327 LTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLC 386
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
K+G + EA+KLFDE ERG +PSLLTYN+LI G+CE+ EL EAGR+WDDMVE+ EPN T
Sbjct: 387 KKGMVQEARKLFDELERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMT 446
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y LI+GFCKIG + EG + +EM+ +GC P+K + L++ L + ++ V +V A
Sbjct: 447 YEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSHDDTVCTIVEAAA 506
Query: 492 ASGS--VESDSWNFLLTRIVSDLDSGAGALDELL 523
G ++ SW + ++V ++ LD +L
Sbjct: 507 LRGQDFLDGHSWEIFIKKMVDTNETWKKYLDLVL 540
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/506 (41%), Positives = 313/506 (61%), Gaps = 14/506 (2%)
Query: 27 STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSI 84
S TVTPP++PWP+RL + L ++ R D A+ +A FH + +
Sbjct: 44 SGYTVTPPVQPWPRRLTARSLSRLLLRAATTDDAVLALRHA-LFHAAPPLPPSLPVFAAA 102
Query: 85 IHKLARA-----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+ +L++A A + +L+ L+ + + F+ ++R +++ FL
Sbjct: 103 LSRLSQADVGAGAAARHLAPVLSLLRASRLPAFSDRPFLPLLRALRPL----PSLRLFLS 158
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ FN + S RS N LL++LV +R L +F+ + K + PN+ +CNIL+K L
Sbjct: 159 LPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGMG 218
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D++ A++VLDEM G+VP++VT+TT+L Y +GD+E A+++F DI+ G PDAT YT
Sbjct: 219 DLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYT 278
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+DGY G+L DA ++MDEME GV+PNEVTY V+IEA CK KS EA +L +ML
Sbjct: 279 VLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDLTREMLGA 338
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
YVP + LC KV+D+LC++GK +A E+W+++++K+ PDN + ST+I+WLCK G + EA
Sbjct: 339 GYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCKNGMVQEA 398
Query: 380 KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ LFDE ERG +PSLLTYN+LI G+CE+ EL EAGR+WDDMVE+ EPN TY LI+GF
Sbjct: 399 RGLFDELERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGF 458
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS--VE 497
CKIG + EG + +EM+ KGC P+K + L++ L E ++ V +V SG ++
Sbjct: 459 CKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSEPSHDDTVWTIVEAVALSGQDFLD 518
Query: 498 SDSWNFLLTRIVSDLDSGAGALDELL 523
W + ++V ++ LD +L
Sbjct: 519 GQLWEIFIRKVVDTNETWKKKLDLVL 544
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/515 (41%), Positives = 304/515 (59%), Gaps = 38/515 (7%)
Query: 27 STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIH 86
S TVTPP++PWP+RL + L ++ R LA+ F +A +H+
Sbjct: 39 SRYTVTPPVQPWPRRLTARSLARLLLRLPTPHLAVLAFRHA------------LFHAAPP 86
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL-------- 138
F AV S L L V+ A P + + FL
Sbjct: 87 LPPSLPVFAAVLSRLP--------AADPALLPPVLSALRAANLPAFSDRPFLPLLRSLPP 138
Query: 139 --------RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ FN SVRS N LL++LV +R L +F+ + K + PN+ +CNI
Sbjct: 139 LPSLRLFLSLPSFNSHPSVRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNI 198
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+K L D++ A++VLDEMP +G+ P++VT+TT+L Y +GDIE A+++F DI+ G
Sbjct: 199 LLKGLVGIGDLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIASG 258
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD T YTVL+DGY + G L DA ++MDEME V+PNEVTY V+IEA CK +K EAR
Sbjct: 259 RRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIEAR 318
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ + +ML YVP +AL KV+D+LC++GK E+A +LW+ + +KN PDN ++ST+I+WL
Sbjct: 319 DFMREMLGAGYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWL 378
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
CK G + EA+ LFDE ERG PSLLTYN+LI+G+CE+ EL EAGR+WDDMVE+G EPN
Sbjct: 379 CKNGMVREARNLFDELERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAM 438
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY LI+G CK G EG + EEM+ +GC P+ F +L++ L E +E + K++ A
Sbjct: 439 TYEALIKGLCKTGKPNEGATVFEEMVSRGCKPSSLLFQVLVDSLSEPRHEDTIRKILETA 498
Query: 491 TASGS--VESDSWNFLLTRIVSDLDSGAGALDELL 523
G ++ DSW + ++V+ D+ LD +L
Sbjct: 499 ALYGRYFLDGDSWEIFVRKVVNATDTSNKHLDLVL 533
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 262/506 (51%), Gaps = 13/506 (2%)
Query: 26 LSTITVTPPIKPWPQRLYPKR-LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSI 84
L++ + P P Q+L + ++ + +NL L F + F H TY +
Sbjct: 22 LNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNA-FQHTASTYRVM 80
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
I +L R D V+ +L ++K + I C E+LFI +I Y G E A+K F RI +F
Sbjct: 81 IERLGRECEMDMVQYILQQMKMD-GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG 139
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ +VR N LL+AL+ ++ +++ ++ N + K ++PNVFT NIL+KALCK D V+ A
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMK-KDGLIPNVFTYNILLKALCKNDRVDAA 198
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
++ EM + G P+ VT+TT++ G I++A+ + G + P Y L+DG
Sbjct: 199 HKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDG 253
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K GR+ A+K++ EM DNGV+PN V+Y +I + C A L M R +
Sbjct: 254 MCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+I GK+ +A +LWK +++ C P+ +T+IH LC G + EA ++ D
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373
Query: 385 EFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ +R G +P++ TY+ LI G +S +L A W+ M+ G PNV TY ++ CK
Sbjct: 374 QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNS 433
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWN 502
+ ++E+M +GC PN +F+ I+GL +G K++ G + + ++N
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493
Query: 503 FLLTRI--VSDLDSGAGALDELLVKN 526
LL + ++ + G E+ +N
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARN 519
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 217/455 (47%), Gaps = 26/455 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +VS + + +D A ++ AG+F P+ Y+++I + + +
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDAREL---AGRFKPSVP----VYNALIDGMCKEGRIEVAI 264
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL E+ N P + + +I + ++G ELA F ++ ++ + L
Sbjct: 265 KLLGEMMDNGVDPNVVS----YSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL 320
Query: 156 LNA-LVQNKRY---DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ ++ K Y DL LM ++ PNV N LI LC +E A++V D+M
Sbjct: 321 IKGCFMRGKLYEALDLWKLMIQDGCE-----PNVVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G +PN+ T++ ++ G+ GD+ A + ++ G P+ TYT ++D K
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A ++++M G PN +T+ I+ C + A LL+ M +P+ ++
Sbjct: 436 DQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGS 390
+D L K E+A L++ + +N P+ +T+++ + G + EA +LF + RG+
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVE-KGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +TYNT+I C+ ++ A +L + + K P++ TY LI G C N +E +
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM 615
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYES-GNEGEV 483
L++ +++G PN +++ L+ ++S G+ G +
Sbjct: 616 AFLDKAINQGICPNFATWNALVRCFFDSLGHMGPI 650
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 201/429 (46%), Gaps = 10/429 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ L +A D L K P + ++ +I GR E+A+K
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRFK--PSVP----VYNALIDGMCKEGRIEVAIKLLGE 269
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V +V S + ++N+L + +L +F + N+ T LIK +
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR-GCDANIHTFTPLIKGCFMRG 328
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A+ + M G PN+V + T++ G G +E A +V + G +P+ TTY+
Sbjct: 329 KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+DG+ K G L A + + M +G PN VTY M++ CK +A +L++ M
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P++ I LC G+VE A +L +R+ C+P+ + ++ L + K EA
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF E E R P+L+TYNT++ G + + EA +L+ + +G P+ TYN +I
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 439 FCKIGNAKEGIRILEEMLD-KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
+CK G K +++E + K P+ +++ LI G N E + A G
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628
Query: 498 S-DSWNFLL 505
+ +WN L+
Sbjct: 629 NFATWNALV 637
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 262/506 (51%), Gaps = 13/506 (2%)
Query: 26 LSTITVTPPIKPWPQRLYPKR-LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSI 84
L++ + P P Q+L + ++ + +NL L F + F H TY +
Sbjct: 22 LNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNA-FQHTASTYRVM 80
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
I +L R D V+ +L ++K + I C E+LFI +I Y G E A+K F RI +F
Sbjct: 81 IERLGRECEMDMVQYILQQMKMD-GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG 139
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ +VR N LL+AL+ ++ +++ ++ N + K ++PNVFT NIL+KALCK D V+ A
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMK-KDGLIPNVFTYNILLKALCKNDRVDAA 198
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
++ EM + G P+ VT+TT++ G I++A+ + G + P Y L+DG
Sbjct: 199 HKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDG 253
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K GR+ A+K++ EM DNGV+PN V+Y +I + C A L M R +
Sbjct: 254 MCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+I GK+ +A +LWK +++ C P+ +T+IH LC G + EA ++ D
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373
Query: 385 EFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ +R G +P++ TY+ LI G +S +L A W+ M+ G PNV TY ++ CK
Sbjct: 374 QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNS 433
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWN 502
+ ++E+M +GC PN +F+ I+GL +G K++ G + + ++N
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493
Query: 503 FLLTRI--VSDLDSGAGALDELLVKN 526
LL + ++ + G E+ +N
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARN 519
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 201/429 (46%), Gaps = 10/429 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ L +A D L K P + ++ +I GR E+A+K
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRFK--PSVP----VYNALIDGMCKEGRIEVAIKLLGE 269
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V +V S + ++N+L + +L +F + N+ T LIK +
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR-GCDANIHTFTPLIKGCFMRG 328
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A+ + M G PN+V + T++ G G +E A +V + G +P+ TTY+
Sbjct: 329 KLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS 388
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+DG+ K G L A + + M +G PN VTY M++ CK +A +L++ M
Sbjct: 389 ILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE 448
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P++ I LC G+VE A +L +R+ C+P+ + ++ L + K EA
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF E E R P+L+TYNT++ G + + EA +L+ + +G P+ TYN +I
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 439 FCKIGNAKEGIRILEEMLD-KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
+CK G K +++E + K P+ +++ LI G N E + A G
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628
Query: 498 S-DSWNFLL 505
+ +WN L+
Sbjct: 629 NFATWNALV 637
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 217/455 (47%), Gaps = 26/455 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +VS + + +D A ++ AG+F P+ Y+++I + + +
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDAREL---AGRFKPSVP----VYNALIDGMCKEGRIEVAI 264
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL E+ N P + + +I + ++G ELA F ++ ++ + L
Sbjct: 265 KLLGEMMDNGVDPNVVS----YSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL 320
Query: 156 LNA-LVQNKRY---DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ ++ K Y DL LM ++ PNV N LI LC +E A++V D+M
Sbjct: 321 IKGCFMRGKLYEALDLWKLMIQDGCE-----PNVVAYNTLIHGLCSNGSLEEALQVCDQM 375
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G +PN+ T++ ++ G+ GD+ A + ++ G P+ TYT ++D K
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A ++++M G PN +T+ I+ C + A LL+ M +P+ ++
Sbjct: 436 DQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGS 390
+D L K E+A L++ + +N P+ +T+++ + G + EA +LF + RG+
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVE-KGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +TYNT+I C+ ++ A +L + + K P++ TY LI G C N +E +
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM 615
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYES-GNEGEV 483
L++ +++G PN +++ L+ ++S G+ G +
Sbjct: 616 AFLDKAINQGICPNFATWNALVRCFFDSLGHMGPI 650
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 256/473 (54%), Gaps = 12/473 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
WP+++ + +I +++++ L +F A + + N F H+++T+ ++IH+L F
Sbjct: 9 WPKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRP 68
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E +L +KQ + + E++F+T+ R YG RP A++ F ++E F V+ + +S T+
Sbjct: 69 AEGMLERMKQE-DCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVF 127
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD-VEGAIRVLDEMPSMG 215
+ LV+ +K R K + P V + NILIKALCK ++ VE A R+ EMP+ G
Sbjct: 128 DILVEENHVKRAIGFYKEMREK-GIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRG 186
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P+ T+ T++ G G I AK + ++ ++G P +YT L+ G + L +A+
Sbjct: 187 CQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAI 246
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++++EM NG+EPN TY +++ CK S +A LL+ M++R+ +P+ +I+ L
Sbjct: 247 ELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGL 306
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP--- 392
C+EGK +A E+ R+ + PD + II LC EA DE G I
Sbjct: 307 CKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNR 366
Query: 393 -----SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+ +N ++ G+C + + T A +L+ M +G+ + T++ L++ FCK G+ +
Sbjct: 367 ASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNK 426
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
RILEEM+ GC P++ +++L+ GL++ E +++ VE++S
Sbjct: 427 AARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKFVEAES 479
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 255/475 (53%), Gaps = 16/475 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
WP+++ +V +I ++++ A+ +F A + N F H+++T+ II +L F
Sbjct: 9 WPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRP 68
Query: 97 VESLLTELKQNPEIKC--GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E +L +KQ KC E++F+++ R YG RP A++ F ++E F ++ + ++ T
Sbjct: 69 AEGMLERMKQE---KCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLT 125
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK-KDDVEGAIRVLDEMPS 213
+L+ LV+ ++ R + + +V + NILIKALCK K+ V+ A+R+ EMP+
Sbjct: 126 ILDILVEENHVKRAIGFYREMR-ELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPN 184
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P+ T+ T++ G G+I AK +F ++ +G+ TYT L+ G + L +
Sbjct: 185 RGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDE 244
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ +++EM+ N +EPN TY +++ CKG S +A LL+ M ++ ++P+ +I+
Sbjct: 245 AIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLIN 304
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP- 392
LC+E K+ +A E+ R+ + P+ + II LC G EA DE G I
Sbjct: 305 GLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISP 364
Query: 393 -------SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ +N ++ G+C + + A +L+ M + + + T++ L++ FCK G+
Sbjct: 365 NRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDL 424
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+ RILEEM+ GC P++ ++++I GL++ E + + + VE++S
Sbjct: 425 HKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKFVEAES 479
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 267/508 (52%), Gaps = 13/508 (2%)
Query: 25 SLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSI 84
S ST++ +P + PQ PK+L + RQ + D L + +A K PNF + Y +
Sbjct: 54 SFSTLSPSPTTQ-LPQNFTPKQLRDALRRQSDEDSILDLLDWASK-QPNFVPSSVIYEEV 111
Query: 85 IHKLARARAFDAVESLLTELKQNP-EIKCGENLFITVIRNYGLAGRPELAVKTF-LRIEK 142
+ KL + +F ++ +L E+K EI+ G F+ +I +Y + AV + E+
Sbjct: 112 LRKLGKDGSFGSMRRVLQEMKHTGCEIRRGT--FLILIESYAKFELFDEAVAVVDIMEEE 169
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDDV 201
F ++ + N LLN LV + LV ++ NSR + + P+V T NILIKALC+ +
Sbjct: 170 FGLKLDAFTYNFLLNVLVDGNKLKLVEIV--NSRMVSRGIKPDVTTFNILIKALCRAHQI 227
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
AI +++EM S G+ P+ T TT++ G++ G++ A R+ ++ G T VL
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ GY K GR+ + + +DEM + G P+ T+ ++ C+ A +LD MLQ +
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGF 347
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
P +I LC+ G+VE+A E+ +++ ++ P+ +T+I LCKE ++ EA +
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE 407
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L +G +P + T+N+LI G+C + A L+++M KG P+ FTYNMLI C
Sbjct: 408 LARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLC 467
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESD 499
G +E + +L+EM GC N +++ LI+G ++ E ++ G S
Sbjct: 468 SRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527
Query: 500 SWNFLLTRIVSD--LDSGAGALDELLVK 525
++N L+ + + ++ A +D++L++
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLME 555
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 215/447 (48%), Gaps = 14/447 (3%)
Query: 74 FSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRP 130
F + T++S+++ L R A+E L L++ +P+I +L + + G
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCK----LGEV 367
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E AV+ ++ + + + NTL++ L + + + + + K ++P+V T N
Sbjct: 368 EEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNS 426
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI+ LC ++ A+ + +EM + G P+ T+ ++ RG +E A + ++ G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ TY L+DG+ K R+ +A ++ DEME G+ N VTY +I+ CK ++ EA
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L+D ML P ++ C G ++ A ++ + + C PD+ T+I L
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL 606
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K G++ A +L + +G + + TYN +I + +EA RL+ +M+EKG P+
Sbjct: 607 SKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDA 666
Query: 430 FTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE----VG 484
TY ++ +G C G E + L EM DKG P+ +SF +L EGL E V
Sbjct: 667 VTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVN 726
Query: 485 KVVSMATASGSVESDSWNFLLTRIVSD 511
+V+ A S S S FL R D
Sbjct: 727 RVMKQANFSDSEVSMIMGFLKIRKFQD 753
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 244/468 (52%), Gaps = 39/468 (8%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + +++ Q+N AL+IF+ K F H TY +I KL F+A+E +L
Sbjct: 5 LLPKHVAAVVKYQKNPLKALEIFNSVKK-EDGFKHTLLTYKGMIEKLGFHGEFEAMEEVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
E + N + E ++I +RNYG G+ + AV F R++ FN + SV+S N ++N LV+
Sbjct: 64 AETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVE 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ +D H ++ R K +VP+V+T I +K+ C+ A R+L+ MPS G + V
Sbjct: 124 YRYFDQAHKVYMRMRDK-GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAV 182
Query: 222 THTTILGGY-----------------------------------VWRGDIENAKRVFGDI 246
+ T++GG+ +G ++ ++R+ +
Sbjct: 183 AYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV 242
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L RG P+ T + + G+ + L +A++++D + G+ P+ +TY +I CK K
Sbjct: 243 LKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKV 301
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA + L M+ Y P +ID C+ G +++A ++ + K +PD + ++
Sbjct: 302 VEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL 361
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ LC++G I A +F+E E+G P+L+ NTL+ G+ + + +A +L ++M E G
Sbjct: 362 INGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGC 421
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
P+++TYN++I G CKIG + ++ + + KG P+ +F+ LI+G
Sbjct: 422 SPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDG 469
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 167/324 (51%), Gaps = 5/324 (1%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N L Q+ D +F + K + PN+ CN L+K L ++ + A+++++EM
Sbjct: 360 SLINGLCQDGDIDRAINVFNEAMEK-GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSE 418
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++ T+ ++ G G + +A + D + +G +PD T+ L+DGY K +L +
Sbjct: 419 NGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDN 478
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A++++D M ++GV P+ +TY ++ CK K + M+++ VP+ + +
Sbjct: 479 AIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTE 538
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF---DEFERGS 390
C+ KVE+A L + + K PD T++ C G + A +LF DE + S
Sbjct: 539 SFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFS 598
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
++ TYN +I + A +L++ M E G P+ +TY ++I GFCK GN G
Sbjct: 599 -HTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYS 657
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGL 474
L ++KG P+ T+F ++ L
Sbjct: 658 FLLVKIEKGLIPSLTTFGRVLNCL 681
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 152/298 (51%)
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+K ++ A+ V + M P++ ++ I+ V + A +V+ + D+G VPD
Sbjct: 88 RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T+ M + + R A ++++ M G E + V Y +I F + EA L ++M
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L P K+I LC +G V+++ L ++L++ P+ + I C+ +
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA +L D RG P ++TYNTLI G+C++ ++ EA MV +G EP+ FTYN +I
Sbjct: 268 NEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSII 327
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G+CK+G + +IL + KG P+++++ LI GL + G+ V + A G
Sbjct: 328 DGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKG 385
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 210/429 (48%), Gaps = 12/429 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL--AVKTF 137
++ +IH L R E LL ++ + NLF I G R L A++
Sbjct: 218 AFNKLIHTLCRKGHVQESERLLNKVLKR---GVSPNLFTVNIFIQGFCQRAMLNEAIRLL 274
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQN-KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + V + NTL+ L +N K + H + K ++ P+ FT N +I C
Sbjct: 275 DGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE--PDGFTYNSIIDGYC 331
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A ++L + G VP+ T+ +++ G GDI+ A VF + +++G P+
Sbjct: 332 KLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLV 391
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
L+ G + G + A+K+M+EM +NG P+ TY ++I CK +A NL+ D
Sbjct: 392 LCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDA 451
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + ++P +ID C++ K+++A E+ R+ PD ++I++ LCK GK
Sbjct: 452 IAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKY 511
Query: 377 WEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ F E+G +P+++TYN L C++ ++ EA L ++M KG+ P+V + L
Sbjct: 512 EDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTL 571
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNK-TSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++GFC G+ ++ + + ++ F + +++++I N K+ + +G
Sbjct: 572 MKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENG 631
Query: 495 SVESDSWNF 503
DS+ +
Sbjct: 632 -FSPDSYTY 639
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 98/215 (45%), Gaps = 5/215 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+SI++ L +A + E ++ K E C N+ + + ++ A + E A+
Sbjct: 497 TYNSILNGLCKAGKY---EDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLI 553
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + V + TL+ N D + +FK ++K + T NI+I A
Sbjct: 554 EEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAG 613
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
K ++ A ++ ++M G P+ T+ ++ G+ G+I + +++G +P TT
Sbjct: 614 KLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTT 673
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+ +++ R+ +AV ++ M G+ P V
Sbjct: 674 FGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 261/489 (53%), Gaps = 15/489 (3%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
+L+ + Q + AL++F+ A K PNFS Y I+ +L R+ +FD ++ +L ++K
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 110
Query: 106 QNPEIKCGENLFITVIRNYG-LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ + G + F+ +I +Y + E+ I++F ++ N +LN LV
Sbjct: 111 SS-RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNS 169
Query: 165 YDLVHLMFKNSRHKFKV---VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
LV + S K V P+V T N+LIKALC+ + AI +L++MPS G+VP+
Sbjct: 170 LKLVEI----SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEK 225
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T TT++ GY+ GD++ A R+ +++ G + V++ G+ K GR+ DA+ + EM
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 282 ED-NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
+ +G P++ T+ ++ CK A ++D MLQ Y P VI LC+ G+
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNT 399
V++A E+ +++ ++C P+ +T+I LCKE ++ EA +L +G +P + T+N+
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G+C + A L+++M KG EP+ FTYNMLI C G E + +L++M G
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGA 516
C + +++ LI+G ++ E ++ G S S ++N L+ + ++ A
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 517 GALDELLVK 525
+D+++++
Sbjct: 526 QLMDQMIME 534
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 201/400 (50%), Gaps = 2/400 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ +I L RA +L ++ + E F TV++ Y G + A++ +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVP-DEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ +F S S+N +++ + R + + ++ P+ +T N L+ LCK
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ AI ++D M G P++ T+ +++ G G+++ A V ++ R P+ TY
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ K ++ +A ++ + G+ P+ T+ +I+ C + A L ++M +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +ID LC +GK+++A + K++ C +T+I CK K EA
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+++FDE E G + +TYNTLI G+C+S + +A +L D M+ +G +P+ +TYN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
FC+ G+ K+ I++ M GC P+ ++ LI GL ++G
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T N LI LCK++ VE A + + S G++P++ T +++ G + A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ +G PD TY +L+D G+L +A+ ++ +ME +G + +TY +I+ FCK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EA + D+M +S +ID LC+ +VEDA +L +++ + PD
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++ C+ G I +A + G P ++TY TLI+G+C++ + A +L +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CFPNKTSFSLLIEGLYESG 478
KG+ YN +IQG + E I + EML++ P+ S+ ++ GL G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 205/423 (48%), Gaps = 14/423 (3%)
Query: 74 FSHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
F Y T++++++ L +A A + ++ +L E +P++ + +VI G
Sbjct: 292 FPDQY-TFNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYT----YNSVISGLCKLGE 345
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ AV+ ++ + + + NTL++ L + + + + + K ++P+V T N
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFN 404
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI+ LC + A+ + +EM S G P+ T+ ++ +G ++ A + +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G TY L+DG+ K + +A ++ DEME +GV N VTY +I+ CK ++ +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L+D M+ P ++ C G ++ A ++ + + C PD T+I
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEP 427
LCK G++ A KL + +G + YN +I G+ + TEA L+ +M+E+ P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 428 NVFTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ +Y ++ +G C G +E + L E+L+KG P +S +L EGL E + K+
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704
Query: 487 VSM 489
V+M
Sbjct: 705 VNM 707
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 259/492 (52%), Gaps = 8/492 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P PK+L+ + RQ + AL++F++A K PNF + Y I+ KL +A +F+ +
Sbjct: 59 PPDFTPKQLIETLRRQTDEVAALRVFNWASK-QPNFVPSSSVYEEILRKLGKAGSFEYMR 117
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE-KFNVQRSVRSLNTLLN 157
+L E+K + + +F+ + +YG + V +E ++ ++ R N LLN
Sbjct: 118 RVLEEMKLSG-CEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLN 176
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
LV + LV +S + ++ +V T NILIKALCK V AI +++EMPS G+
Sbjct: 177 VLVDANKLKLVESA-HSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLS 235
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+ T TTI+ GY+ G+++ A R+ +++ G T VL++G+ K GR+ A+
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 295
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+ E G P++ TY ++ CK + A ++D ML P +I LC+
Sbjct: 296 IQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCK 355
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
G++E+A ++ +++ ++C P+ + II LCKE ++ EA ++ +G +P + T
Sbjct: 356 LGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCT 415
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+N+LI G+C S+ A L+++M KG P+ FTYNMLI C +E + +L+EM
Sbjct: 416 FNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEME 475
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD--LD 513
GC N ++ LI+G ++ E ++ G S +S ++N L+ + ++
Sbjct: 476 LNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVE 535
Query: 514 SGAGALDELLVK 525
A +D+++++
Sbjct: 536 DAAQLMDQMIME 547
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 160/306 (52%), Gaps = 3/306 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T N +I +LCK++ V+ A + + S G++P++ T +++ G + ++A +
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ +G PD TY +L+D +L +A+ ++ EME NG N V Y +I+ FCK
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EA + D+M + S +ID LC+ +VEDA +L +++ + PD
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++ CK G I +A + G P ++TY TLI+G+C++ + A RL +
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ 615
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KG+ YN +IQ K E +R+ EMLDK P+ ++ ++ GL G G
Sbjct: 616 MKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG--G 673
Query: 482 EVGKVV 487
+G+ V
Sbjct: 674 PIGEAV 679
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 228/486 (46%), Gaps = 17/486 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK--FHPNFSHNYDTYHSIIHKLARAR-AFDAVESLLTE 103
L++ +Q +D AL A F P+ Y+T + + K+ A+ A + V+++L
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPD-QFTYNTLVNGLCKIGHAKHAMEVVDAMLLG 337
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+P+I + ++I G E AVK ++ + + + N ++++L +
Sbjct: 338 -GLDPDIYT----YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKEN 392
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
R D + + K ++P+V T N LI+ LC + + A+ + +EM G P+ T+
Sbjct: 393 RVDEATEIARLLTSK-GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
++ +E A + ++ G + Y L+DG+ K R+ +A ++ DEME
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
GV + VTY +I+ CK K+ +A L+D M+ P ++ C+ G ++
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIA 402
A ++ + + C PD +T+I LCK G++ A +L + +G + + YN +I
Sbjct: 572 AADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQ 631
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCF 461
+ + EA RL+ +M++K P+ TY ++ +G C G E + EM+++G
Sbjct: 632 ALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNI 691
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSM----ATASGSVESDSWNFLLTRIVSD-LDSGA 516
P +SF +L EGL + + K+V M A S S FL R D L +
Sbjct: 692 PEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTIRGFLKIRKFQDALSTLG 751
Query: 517 GALDEL 522
G LD++
Sbjct: 752 GILDDM 757
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 155/358 (43%), Gaps = 42/358 (11%)
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD---EMPSMGMVPNLVTHTTILGGYVWR 233
H +P FT LI+ L ++ D A+RV + + P+ VP+ + IL
Sbjct: 53 HIVHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPN--FVPSSSVYEEILRKLGKA 110
Query: 234 GDIENAKRVFGDI------LDRGWV------------------------------PDATT 257
G E +RV ++ DRG PD
Sbjct: 111 GSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRF 170
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y VL++ + +L M + + T+ ++I+A CK + A ++++M
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP 230
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
P ++ E G ++ A + ++++ C + + +I+ CK+G+I
Sbjct: 231 SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRID 290
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A E G P TYNTL+ G+C+ A + D M+ G++P+++TYN LI
Sbjct: 291 QALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLI 350
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G CK+G +E ++IL++M+ + C PN +++ +I L + E ++ + T+ G
Sbjct: 351 SGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 266/495 (53%), Gaps = 11/495 (2%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P P P +L+ ++ RQ + AL +F +A PN+S + +H ++ +LARA +FD+
Sbjct: 52 PLPPDFSPSQLLDLLRRQPDSSSALSLFQWASA-QPNYSAHPSVFHELLRQLARAGSFDS 110
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT-FLRIEK-FNVQRSVRSLNT 154
+ +LL ++ + +I E+ F+ + Y + + FL +E+ F V+ R N
Sbjct: 111 MLTLLRQM-HSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNV 169
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+ LV+ + LV + V P+V T NILI+ALCK + AI +L++MP+
Sbjct: 170 ALSLLVKANKLKLVETLHSKMVAD-AVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNY 228
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ P+ T TT++ G++ D+E A R+ +++ G + + VL++G K GR+ +A
Sbjct: 229 GLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA 288
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ + E+ G P++VT+ ++ C+ + ++D ML++ + +I
Sbjct: 289 LRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISG 346
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
LC+ G++++A E+ ++ ++C P+ +T+I LCKE + A +L +G +P
Sbjct: 347 LCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPD 406
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+ T+N+LI G+C ++ A L+++M EKG +P+ FTY++LI+ C KE + +L+
Sbjct: 407 VCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLK 466
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD- 511
EM GC N ++ LI+GL ++ G+ + G S S ++N L+ +
Sbjct: 467 EMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSK 526
Query: 512 -LDSGAGALDELLVK 525
++ A +D+++++
Sbjct: 527 RVEEAAQLMDQMIME 541
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 174/378 (46%), Gaps = 41/378 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T N LI LCK++ VE A + + S G++P++ T +++ G + E A +
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429
Query: 243 FGDILDRGWVPDATTYTV-----------------------------------LMDGYIK 267
F ++ ++G PD TY++ L+DG K
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
R+ DA + D+ME GV + VTY +I CK K+ EA L+D M+ P
Sbjct: 490 NNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++ C++G ++ A ++ + + C PD T+I LCK G++ A KL +
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609
Query: 388 -RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA- 445
+G + + YN +I +C+ EA RL+ +M+EKG P+V TY ++ +G C G
Sbjct: 610 MKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPI 669
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWN--- 502
+E + EML+KG P SF L EGL E + ++++M G +
Sbjct: 670 QEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETSIIR 729
Query: 503 -FLLTRIVSDLDSGAGAL 519
FL + +D + GA+
Sbjct: 730 GFLKIQKFNDALANLGAI 747
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 206/425 (48%), Gaps = 13/425 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+ T++ +I L +A +L ++ N ++ E F T+++ + E V+
Sbjct: 198 DVSTFNILIRALCKAHQLRPAILMLEDMP-NYGLRPDEKTFTTLMQGF----IEEADVEG 252
Query: 137 FLRIEKFNVQRSVR----SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
LRI++ V+ S+N L+N L + R + L F F P+ T N L+
Sbjct: 253 ALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA-LRFIYEEEGF--CPDQVTFNALV 309
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+ ++ + ++D M G ++ T+ +++ G G+I+ A + ++ R
Sbjct: 310 NGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCE 369
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L+ K + A ++ + GV P+ T+ +I+ C A L
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++M ++ P +I+ LC E ++++A L K + C + + +T+I LCK
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++ +A+ +FD+ E G S +TYNTLI G+C+S + EA +L D M+ +G++P+ FT
Sbjct: 490 NNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y +++ FC+ G+ K I++ M GC P+ ++ LI GL ++G K++
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609
Query: 492 ASGSV 496
G V
Sbjct: 610 MKGMV 614
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 203/428 (47%), Gaps = 12/428 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-AV 97
P ++ LV+ + R ++ L++ + F + TY+S+I L + D AV
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFM--LEKGFELDVYTYNSLISGLCKLGEIDEAV 357
Query: 98 ESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
E L + ++ P L T+ + + ELA + V V + N+L
Sbjct: 358 EILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARV----LTSKGVLPDVCTFNSL 413
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ L ++ +F+ + K P+ FT +ILI++LC + ++ A+ +L EM G
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEK-GCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
N+V + T++ G + +A+ +F + G + TY L++G K R+ +A
Sbjct: 473 CARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAA 532
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++MD+M G++P++ TY M++ FC+ A +++ +M P +I L
Sbjct: 533 QLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGL 592
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C+ G+V+ A +L + + K + + +I LCK + EA +LF E E+G P +
Sbjct: 593 CKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDV 652
Query: 395 LTYNTLIAGMCESA-ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+TY + G+C + EA +M+EKG+ P ++ L +G C + I+++
Sbjct: 653 ITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLIN 712
Query: 454 EMLDKGCF 461
+++KG F
Sbjct: 713 MVMEKGRF 720
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 246/464 (53%), Gaps = 7/464 (1%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
+L+ + Q + AL++F+ A K PNFS Y I+ +L R+ +FD + +L ++K
Sbjct: 52 KLLDSLRSQADDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMK 110
Query: 106 QNPEIKCGENLFITVIRNYG-LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
N + G + F+ +I +Y + E+ I+ F ++ N +LN LV
Sbjct: 111 -NSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNN 169
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
LV + + + P+V T N+LIKALC+ + AI +L++MPS G+VP+ T T
Sbjct: 170 LKLVEIAHAK-MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED- 283
TI+ GY+ GD++ A R+ +++ G + V++ G+ K GR+ DA+ + EM +
Sbjct: 229 TIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
+G P++ T+ ++ CK A ++D MLQ Y P VI LC+ G+V++
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
A E +++ ++C P+ +T+I LCKE ++ EA +L +G +P + T+N+LI
Sbjct: 349 AVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C + A L+++M KG EP+ FTYNMLI C G E + +L++M GC
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
+ +++ LI+G ++ E ++ G S S ++N L+
Sbjct: 469 SVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 219/444 (49%), Gaps = 10/444 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGK---FHPNFSHNYDTYHSIIHKLARARAFD 95
P + R+++++ NL L ++I H P+ S T++ +I L RA
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKL-VEIAHAKMSVWGIKPDVS----TFNVLIKALCRAHQLR 206
Query: 96 AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+L ++ + E F T+++ Y G + A++ ++ +F S S+N +
Sbjct: 207 PAILMLEDMPSYGLVP-DEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ + R + + ++ P+ +T N L+ LCK V+ AI ++D M G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P++ T+ +++ G G+++ A ++ R P+ TY L+ K ++ +A
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ + G+ P+ T+ +I+ C + A L ++M + P +ID L
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSL 394
C +GK+++A + K++ C +T+I CK KI EA+++FDE E G +
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNS 505
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+TYNTLI G+C+S + +A +L D M+ +G +P+ FTYN L+ FC+ G+ K+ I++
Sbjct: 506 VTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 455 MLDKGCFPNKTSFSLLIEGLYESG 478
M GC P+ ++ LI GL ++G
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAG 589
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 206/423 (48%), Gaps = 14/423 (3%)
Query: 74 FSHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
F Y T++++++ L +A A + ++ +L E +P++ + +VI G
Sbjct: 292 FPDQY-TFNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYT----YNSVISGLCKLGE 345
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ AV+ ++ + + + NTL++ L + + + + + K ++P+V T N
Sbjct: 346 VKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFN 404
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI+ LC + A+ + +EM S G P+ T+ ++ +G ++ A + +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G TY L+DG+ K ++ +A ++ DEME +GV N VTY +I+ CK ++ +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L+D M+ P ++ C G ++ A ++ + + C PD T+I
Sbjct: 525 SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEP 427
LCK G++ A KL + +G + YN +I G+ + TEA L+ +M+E+ P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAP 644
Query: 428 NVFTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ +Y ++ +G C G +E + L E+L+KG P +S +L EGL E + K+
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704
Query: 487 VSM 489
V+M
Sbjct: 705 VNM 707
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 231/438 (52%), Gaps = 7/438 (1%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+R+VS+ + L IF A + ++ T++S+I A + F + +
Sbjct: 49 PRRVVSV--SRSFLQSETYIFKSASQMG-SYKSGDSTFYSLIENYANSGDFGTLFQVFDR 105
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQN 162
+K+ + +N FI V R YG A PE A++ F R +++F +R+VRS N++LN ++Q
Sbjct: 106 MKRERRVFIEKN-FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQE 164
Query: 163 KRYDLVHLMFK-NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ ++ K + PNV + N++IKA+CK V+ AI V EM P++
Sbjct: 165 GLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVF 224
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ T++ G I+ A + ++ G P + T+ VL++G K G + K++D M
Sbjct: 225 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 284
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G PNEVTY +I C K +A +LLD M+ K VP+ +I+ L ++G+
Sbjct: 285 FLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRS 344
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
D L L + + ST+I L KE K EA L+ + E+G P+++ Y+ L
Sbjct: 345 VDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSAL 404
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G+C +L EA + +MV KG PN FTY+ LI+GF K GN+++ IR+ +EM C
Sbjct: 405 IDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNC 464
Query: 461 FPNKTSFSLLIEGLYESG 478
PN+ +S+LI GL E G
Sbjct: 465 VPNEICYSVLIHGLCEDG 482
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 201/409 (49%), Gaps = 42/409 (10%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
NL I + GL R A++ F + + V + TL++ L + R D L+
Sbjct: 192 NLVIKAMCKLGLVDR---AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 248
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ + P+ T N+LI LCKK D+ +++D M G VPN VT+ TI+ G +G
Sbjct: 249 MQIE-GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKG 307
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ A + ++ VP+ TY L++G +K GR D V ++ +E+ G NE Y
Sbjct: 308 KLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 367
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA----CEL--- 347
+I K +KS EA L M+++ P+ + +ID LC EGK+++A CE+
Sbjct: 368 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 427
Query: 348 ----------------------------WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
WK + + NC+P+ S +IH LC++GK+ EA
Sbjct: 428 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 487
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV--EKGVEPNVFTYNMLI 436
++ RG P ++ Y+++I G+C + + +L+++M+ E +P+V TYN+L+
Sbjct: 488 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 547
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+ CK + I +L MLD+GC P+ + ++ + L E N + G+
Sbjct: 548 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGR 596
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 27/353 (7%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMF 172
E + T+I L G+ + AV R+ + + TL+N LV Q + D VHL+
Sbjct: 293 EVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLL- 351
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+S + N + + LI L K++ E A+ + +M G PN+V ++ ++ G
Sbjct: 352 -SSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 410
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G ++ AK + +++++G P+A TY+ L+ G+ K G A++V EM N PNE+
Sbjct: 411 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 470
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V+I C+ K EA + ML R P +I LC G VE +L+ +L
Sbjct: 471 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530
Query: 353 --RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAE 409
+ PD + ++ LCK+ I A L + +RG P L+T N + + E
Sbjct: 531 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 590
Query: 410 LTEAGRLWDD---------------------MVEKGVEPNVFTYNMLIQGFCK 441
+ GR + D M++K + PN T+ +I CK
Sbjct: 591 PPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 132/334 (39%), Gaps = 71/334 (21%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S +F+++ + A+ + + N Y ++I L R D + +L E+
Sbjct: 369 LISGLFKEEKSEEAMGL--WKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 426
Query: 107 NPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
C N F ++I+ + G + A++ + + K N
Sbjct: 427 K---GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNC------------------- 464
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
VPN ++LI LC+ + A+ + M G+ P++V ++
Sbjct: 465 -----------------VPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 507
Query: 225 TILGGYVWRGDIENAKRVFGDIL--DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+++ G G +E ++F ++L + PD TY +L+ K ++ A+ +++ M
Sbjct: 508 SMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML 567
Query: 283 DNGVEPNEVTYGVMIEAFC-KGKKSGEARNLLDD--------------------MLQRKY 321
D G P+ +T + + A K + R LD+ MLQ+
Sbjct: 568 DRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFL 627
Query: 322 VPSSALCCKVIDLLCEEGKVE---DACELWKRLL 352
P+++ ++I LC+ KV+ D C W L
Sbjct: 628 PPNASTWERIIPELCKPKKVQAIIDKC--WSSLF 659
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 233/440 (52%), Gaps = 10/440 (2%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + +++ Q++ AL IF+ K F H + TY +I KL FDA+E +L
Sbjct: 5 LLPKHVAAVLKYQKDPLKALSIFNSVKK-EDGFKHTFLTYKRMIEKLGFHGEFDAMERVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
E++ N + E ++++ +RNYG G+ + AV F R++ +N + S+ S N ++N LV+
Sbjct: 64 MEMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVE 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
++ H ++ +H+ + P+V T I IK+ C+ A+R+L+ MPS G N V
Sbjct: 124 YGYFNQAHKVYLRMKHE-GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAV 182
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+ T++ G+ A +F +L G P T+ LM K G L + K+++++
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242
Query: 282 EDNGVEPNEVTYGVMIEAFCK-------GKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
NGV PN T+ + I+ C+ K EA N L M+ + P +I
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPS 393
+ GK++DA + K K +PD ++I +C++G I A LF+E +G PS
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ YNTLI G+ + + +A +L +DM ++G+ P+++TYN++I G CK+G + +L
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422
Query: 454 EMLDKGCFPNKTSFSLLIEG 473
+ KG P+ +F+ LI+G
Sbjct: 423 AAIAKGYLPDIFTFNTLIDG 442
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 210/429 (48%), Gaps = 11/429 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ------NPEIKCGENLFITVIRNYGLAGRP 130
N T++ I L R + S + E + N ++ + + T+I Y G+
Sbjct: 250 NLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKI 309
Query: 131 ELAVKTFLRIEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ A + L+ KF + +L+ + Q+ D +F+ + K + P++ N
Sbjct: 310 QDASR-ILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGK-GLKPSIVLYN 367
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LIK L ++ V A++++++M GM P++ T+ ++ G G + +A + + +
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK 427
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G++PD T+ L+DGY K ++ +A+ ++D M +GV P+ +TY ++ CK K +
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
++++ +P+ +I+ LC+ KV +A +L + + + +PD T+I
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547
Query: 370 LCKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C G + EA +LF E+ ++ TYN +I E ++ A +L+ +M +KG +P
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDP 607
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ +TY ++I GFCK+GN G L + ++ G P+ T+F +I L E +V
Sbjct: 608 DSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIV 667
Query: 488 SMATASGSV 496
+ +G V
Sbjct: 668 HLMVRTGVV 676
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 142/290 (48%), Gaps = 8/290 (2%)
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+K V+ A+ V + M P++ ++ I+ V G A +V+ + G PD
Sbjct: 88 RKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVC 147
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T+ + + + R A+++++ M G E N V Y +I F + EA L + M
Sbjct: 148 TFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKM 207
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG-- 374
L+ P A K++ +LC++G +++ +L ++L+ P+ + I LC++G
Sbjct: 208 LRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL 267
Query: 375 -----KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
K+ EA+ + +G P TYNT+I G + ++ +A R+ D KG P+
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPD 327
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
FTY LI G C+ G+ + + EE L KG P+ ++ LI+GL + G
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 267/525 (50%), Gaps = 41/525 (7%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + ++I Q + AL++F+ K F H +TY +I KL F+A+E +L
Sbjct: 5 LQPKHVAAVIRYQNDPLNALKMFNQV-KTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
E+++N + K E ++I ++R+YG G+ + AV F R++ ++ + SV+S N ++N LV+
Sbjct: 64 AEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ H ++ + + P+V+T I +K+ C A+R+L+ MP G N V
Sbjct: 124 YGYFSQAHKVYMRMK-DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 222 THTTILGGY-----------------------------------VWRGDIENAKRVFGDI 246
++ ++ G+ +G+++ ++++F +
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG P+ T+ + + G + G + +A ++++ + G+ P+ ++Y +I FCK K
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA L M+ P+ +I+ C+ G +++A ++ + + K +PD S++
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ LC +G + A +F E E+G S++ YNTL+ G+ + + +A +L DM+E G
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+++TYN+++ G CK+G + IL + + KGC P+ +F+ LI+G + N + +
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 486 VVSMATASG-SVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
++ + G + + ++N LL + LD+ +L K C
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 200/421 (47%), Gaps = 8/421 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y+++I + E L ++ N ++ E + T+I + AG + A K LR
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKM-VNSGVEPNEFTYNTIINGFCKAGMMQNADK-ILR 345
Query: 140 IEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCK 197
F + ++L+N L + + +F + K FK ++ N L+K L K
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK--HSIILYNTLVKGLSK 403
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ V A++++ +M G P++ T+ ++ G G + +A + D + +G +PD T
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+DGY K + A++++D M +G+ P+ +TY ++ CK +K + ML
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
++ P+ +I+ C++ KV +A EL+K + + PD T+I LC G++
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583
Query: 378 EAKKLFDEFERGSIPSLLT--YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +LF E+ S T +N +I CE ++ A +L+ M P+ +TY ++
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I +CK GN L E + KG P+ T+ ++ L + E ++++ +G
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGI 703
Query: 496 V 496
V
Sbjct: 704 V 704
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 177/390 (45%), Gaps = 6/390 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++II+ +A + +L + I E + ++I G A+ F
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIP-DEFTYSSLINGLCNDGDMNRAMAVFYE 381
Query: 140 IEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + S+ NTL+ L Q + LM H P+++T N+++ LCK
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG--CSPDIWTYNLVVNGLCKM 439
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A +L++ + G +P++ T T++ GY + +++ A + +L G PD TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L++G K +L + V M + G PN +TY ++IE+FCK +K EA L +M
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP-DNAISSTIIHWLCKEGKIW 377
R P C +I LC G+++ A EL+ + ++ AI + +I+ C++ +
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVS 619
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A+KLF + P TY +I C++ + A + + KG+ P+ T ++
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVL 679
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
C E + I+ M+ G P + +
Sbjct: 680 NCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 121/248 (48%), Gaps = 2/248 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+I Y + A++ + + V + NTLLN L + ++ D V FK
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K PN+ T NILI++ CK V A+ + EM + G+ P++VT T++ G G++
Sbjct: 524 EK-GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582
Query: 237 ENAKRVFGDI-LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A +F I + + + ++++ + + ++ A K+ +M + P+ TY V
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
MI+++CK A L + + + VPS C KV++ LC ++ +A + +++
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702
Query: 356 CMPDNAIS 363
+P+ S
Sbjct: 703 IVPEEVNS 710
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+Q+N+D A++I + + TY+++++ L +AR D V + K E C
Sbjct: 473 KQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLDNV---VDTFKAMLEKGC 527
Query: 113 GENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
N+ + +I ++ + A++ F ++ + + +L TL+ L N D +
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F ++K + NI+I A C+K +V A ++ +M P+ T+ ++ Y
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G+I+ A + + +G VP TT +++ RL++AV +++ M NG+ P E
Sbjct: 648 CKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707
Query: 291 V 291
V
Sbjct: 708 V 708
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 223/420 (53%), Gaps = 5/420 (1%)
Query: 62 QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
QIF A + ++ T++S+I A + F + + +K+ + +N FI V
Sbjct: 49 QIFKSASQMG-SYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKN-FILVF 106
Query: 122 RNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK-NSRHKF 179
R YG A PE A++ F R +++F +R+VRS N++LN ++Q + ++ K
Sbjct: 107 RAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT 166
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ PNV + N++IKA+CK V+ AI V EM P++ T+ T++ G I+ A
Sbjct: 167 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 226
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ G P + T+ VL++G K G + K++D M G PNEVTY +I
Sbjct: 227 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 286
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C K +A +LLD M+ K VP+ +I+ L ++G+ D L L + +
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
ST+I L KE K EA L+ + E+G P+++ Y+ LI G+C +L EA +
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+MV KG PN FTY+ LI+GF K GN+++ IR+ +EM C PN+ +S+LI GL E G
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 201/409 (49%), Gaps = 42/409 (10%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
NL I + GL R A++ F + + V + TL++ L + R D L+
Sbjct: 176 NLVIKAMCKLGLVDR---AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 232
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ + P+ T N+LI LCKK D+ +++D M G VPN VT+ TI+ G +G
Sbjct: 233 MQIE-GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKG 291
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ A + ++ VP+ TY L++G +K GR D V ++ +E+ G NE Y
Sbjct: 292 KLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 351
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA----CEL--- 347
+I K +KS EA L M+++ P+ + +ID LC EGK+++A CE+
Sbjct: 352 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 411
Query: 348 ----------------------------WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
WK + + NC+P+ S +IH LC++GK+ EA
Sbjct: 412 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 471
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV--EKGVEPNVFTYNMLI 436
++ RG P ++ Y+++I G+C + + +L+++M+ E +P+V TYN+L+
Sbjct: 472 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 531
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+ CK + I +L MLD+GC P+ + ++ + L E N + G+
Sbjct: 532 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGR 580
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 27/353 (7%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMF 172
E + T+I L G+ + AV R+ + + TL+N LV Q + D VHL+
Sbjct: 277 EVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLL- 335
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+S + N + + LI L K++ E A+ + +M G PN+V ++ ++ G
Sbjct: 336 -SSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 394
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G ++ AK + +++++G P+A TY+ L+ G+ K G A++V EM N PNE+
Sbjct: 395 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 454
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V+I C+ K EA + ML R P +I LC G VE +L+ +L
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Query: 353 --RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAE 409
+ PD + ++ LCK+ I A L + +RG P L+T N + + E
Sbjct: 515 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 574
Query: 410 LTEAGRLWDD---------------------MVEKGVEPNVFTYNMLIQGFCK 441
+ GR + D M++K + PN T+ +I CK
Sbjct: 575 PPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 132/334 (39%), Gaps = 71/334 (21%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S +F+++ + A+ + + N Y ++I L R D + +L E+
Sbjct: 353 LISGLFKEEKSEEAMGL--WKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 410
Query: 107 NPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
C N F ++I+ + G + A++ + + K N
Sbjct: 411 K---GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNC------------------- 448
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
VPN ++LI LC+ + A+ + M G+ P++V ++
Sbjct: 449 -----------------VPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 491
Query: 225 TILGGYVWRGDIENAKRVFGDIL--DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+++ G G +E ++F ++L + PD TY +L+ K ++ A+ +++ M
Sbjct: 492 SMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML 551
Query: 283 DNGVEPNEVTYGVMIEAFC-KGKKSGEARNLLDD--------------------MLQRKY 321
D G P+ +T + + A K + R LD+ MLQ+
Sbjct: 552 DRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFL 611
Query: 322 VPSSALCCKVIDLLCEEGKVE---DACELWKRLL 352
P+++ ++I LC+ KV+ D C W L
Sbjct: 612 PPNASTWERIIPELCKPKKVQAIIDKC--WSSLF 643
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 253/467 (54%), Gaps = 9/467 (1%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P +L+ + R+++ + +F++A K PNF + + ++HKL +A FDA++ +L E
Sbjct: 56 PTQLLHSLRREEDSSAVIHLFYWASK-QPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKE 114
Query: 104 LKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+K + + ++L FI ++GL L + +E F V + N LLN LV
Sbjct: 115 MKISLSVIDNDSLLVFIESYASFGLYNEI-LQFVDAMEVE-FGVVANTHFYNFLLNVLVD 172
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ LV + N + + P+V T NILIKALC+ + AI +++EM G++P+
Sbjct: 173 GNKLKLVEIAHSNMVSR-GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEK 231
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T TTI+ G++ G+++ A RV +++ G V T VL++G+ K GR+ +A++ ++EM
Sbjct: 232 TFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM 291
Query: 282 E-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
G P++ T+ +++ K A ++D ML+ + P +I LC+ G+
Sbjct: 292 SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE 351
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
V++A ++ +++ ++C P+ +TII LCKE ++ EA KL +G +P + TYN+
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G+C S T A L+ +M KG P+ FTYNMLI C G +E + +L+EM G
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
C N +++ LI+G ++ E ++ G S S ++N L+
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 2/311 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+V T N LI+ LC + A+ + EM + G P+ T+ ++ +RG ++ A
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ G + TY L+DG+ K R+ +A ++ D+ME GV N VTY +I+
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK ++ EA L+D M+ P ++ C+ G ++ A ++ + + C PD
Sbjct: 522 CKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDI 581
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
T+I LCK G++ A KL + +G + YN +I + EA RL+ +
Sbjct: 582 VTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFRE 641
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M+EK P+ TY ++ +G C+ G E + + EML++G P +SF +L EGL+
Sbjct: 642 MIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLA 701
Query: 479 NEGEVGKVVSM 489
G + K++ M
Sbjct: 702 MVGTLIKLIDM 712
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 200/461 (43%), Gaps = 51/461 (11%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + LV+ + + ++ AL++ F + TY+S+I L + V
Sbjct: 298 FPDKYTFNMLVNGLSKTGHVKHALEVMDMM--LREGFDPDIYTYNSLISGLCK---LGEV 352
Query: 98 ESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ + L Q E C N + T+I + E A K L + + V + N+L
Sbjct: 353 DEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSL 412
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ L ++ + + ++K + K P+ FT N+LI +LC + ++ A+ +L EM G
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTK-GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
N++T+ T++ G+ I A+ +F + +G ++ TY L+DG K R+ +A
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEAS 531
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++MD+M G+ P++ TY ++ FCK +A +++ M P +I L
Sbjct: 532 QLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGL 591
Query: 336 CEEGKVE-----------------------------------DACELWKRLLRKNCMPDN 360
C+ G+VE +A L++ ++ K PD
Sbjct: 592 CKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDA 651
Query: 361 AISSTIIHWLCKEG-KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ LC+ G I EA E ERG +P ++ L G+ A + +L D
Sbjct: 652 VTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLID 711
Query: 419 DMVEKGVEPNVFTYN--MLIQGFCKIGNAKEGIRILEEMLD 457
++EK F+ N +I+GF KI ++ + L +LD
Sbjct: 712 MVMEKA----KFSDNEVTMIRGFLKISKYQDALATLGGILD 748
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 267/525 (50%), Gaps = 41/525 (7%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + ++I Q + AL++F+ K F H +TY +I KL F+A+E +L
Sbjct: 5 LQPKHVAAVIRYQNDPLNALKMFNQV-KTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
E+++N + K E ++I ++R+YG G+ + AV F R++ ++ + SV+S N ++N LV+
Sbjct: 64 AEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVE 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ H ++ + + P+V+T I +K+ C A+R+L+ MP G N V
Sbjct: 124 YGYFSQAHKVYMRMK-DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 222 THTTILGGY-----------------------------------VWRGDIENAKRVFGDI 246
++ ++ G+ +G+++ ++++F +
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG P+ T+ + + G + G + +A ++++ + G+ P+ ++Y +I FCK K
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA L M+ P+ +I+ C+ G +++A ++ + + K +PD S++
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ LC +G + A +F E E+G S++ YNTL+ G+ + + +A +L DM+E G
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+++TYN+++ G CK+G + IL + + KGC P+ +F+ LI+G + N + +
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 486 VVSMATASG-SVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
++ + G + + ++N LL + LD+ +L K C
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 199/421 (47%), Gaps = 8/421 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y+++I + E L ++ N ++ E + T+I + AG + A K LR
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKM-VNSGVEPNEFTYNTIINGFCKAGMMQNADK-ILR 345
Query: 140 IEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCK 197
F + ++L+N L + + +F + K FK ++ N L+K L K
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK--HSIILYNTLVKGLSK 403
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ V A++++ +M G P++ T+ ++ G G + +A + D + +G +PD T
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+DGY K + A++++D M +G+ P+ +TY ++ CK +K + ML
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
++ P+ +I+ C++ KV +A EL+K + + PD T+I LC G++
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583
Query: 378 EAKKLFDEFERGSIPSLLT--YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +LF E+ S T +N +I C ++ A +L+ M P+ +TY ++
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I +CK GN L E + KG P+ T+ ++ L + E ++++ +G
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGI 703
Query: 496 V 496
V
Sbjct: 704 V 704
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 176/390 (45%), Gaps = 6/390 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++II+ +A + +L + I E + ++I G A+ F
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIP-DEFTYSSLINGLCNDGDMNRAMAVFYE 381
Query: 140 IEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + S+ NTL+ L Q + LM H P+++T N+++ LCK
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG--CSPDIWTYNLVVNGLCKM 439
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A +L++ + G +P++ T T++ GY + +++ A + +L G PD TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L++G K +L + V M + G PN +TY ++IE+FCK +K EA L +M
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP-DNAISSTIIHWLCKEGKIW 377
R P C +I LC G+++ A EL+ + ++ AI + +I+ C + +
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVS 619
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A+KLF + P TY +I C++ + A + + KG+ P+ T ++
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVL 679
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
C E + I+ M+ G P + +
Sbjct: 680 NCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 2/248 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+I Y + A++ + + V + NTLLN L + ++ D V FK
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K PN+ T NILI++ CK V A+ + EM + G+ P++VT T++ G G++
Sbjct: 524 EK-GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582
Query: 237 ENAKRVFGDI-LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A +F I + + + ++++ + ++ A K+ +M + P+ TY V
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
MI+++CK A L + + + VPS C KV++ LC ++ +A + +++
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702
Query: 356 CMPDNAIS 363
+P+ S
Sbjct: 703 IVPEEVNS 710
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+Q+N+D A++I + + TY+++++ L +AR D V + K E C
Sbjct: 473 KQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARKLDNV---VDTFKAMLEKGC 527
Query: 113 GENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
N+ + +I ++ + A++ F ++ + + +L TL+ L N D +
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F ++K + NI+I A C K +V A ++ +M P+ T+ ++ Y
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G+I+ A + + +G VP TT +++ RL++AV +++ M NG+ P E
Sbjct: 648 CKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707
Query: 291 V 291
V
Sbjct: 708 V 708
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 246/500 (49%), Gaps = 47/500 (9%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
+ L PK + +++ Q + AL++F+ A K F H TY I+ KL F+ +E
Sbjct: 3 RTLLPKHVAAVVKIQTDPLKALEMFNSA-KSEDGFKHTASTYKCIVQKLGHHGEFEEMEK 61
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
LL+E+++N E +I ++NYG G+ + AV TF R++ +N SV S N ++N L
Sbjct: 62 LLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNIL 121
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ ++ H ++ R + V +V+T I IK+ CK A+R+L MP +G N
Sbjct: 122 VEFGYHNQAHKVYMRMRDR-GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSN 180
Query: 220 LVTHTTILGGYVWRGDIENAKRVF-----------------------------------G 244
V + T++ G G+ ++A+ +F G
Sbjct: 181 AVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLG 240
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVK---------VMDEMEDNGVEPNEVTYGV 295
+L RG P+ T+ + + G + G L AV+ + +M + G EP+++TY
Sbjct: 241 KVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNS 300
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ +CK +A +L D + + + P C +I+ C++G + A ++K L K
Sbjct: 301 IIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKG 360
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
P + +T+I L ++G I A +L +E E G +P++ TYN +I G+C+ +++A
Sbjct: 361 LRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDAS 420
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L DD + KG P++FTYN LI G+CK ++ M +G P+ +++ L+ GL
Sbjct: 421 HLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGL 480
Query: 475 YESGNEGEVGKVVSMATASG 494
++G EV ++ G
Sbjct: 481 CKAGKSEEVMEIFKAMEEKG 500
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 204/406 (50%), Gaps = 27/406 (6%)
Query: 91 ARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
AR + A L L+ PE+ C N + TV+ +G + A + F + +
Sbjct: 160 ARPYAA----LRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPD 215
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-----PNVFTCNILIKALCKKDDVEG 203
V + N L++ L + L+F++ R KV+ PN+FT NI ++ LC++ ++
Sbjct: 216 VVAFNKLVHVLCKKG------LVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDR 269
Query: 204 AIR---------VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
A+R L +M + G P+ +T+ +I+ GY +G +++A RV D + +G+ PD
Sbjct: 270 AVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPD 329
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY L++G+ K G A+ V + G+ P+ V Y +I+ + A L++
Sbjct: 330 EFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMN 389
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M + +P+ VI+ LC+ G V DA L + K C PD +T+I CK+
Sbjct: 390 EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQL 449
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ A ++ + + +G P ++TYNTL+ G+C++ + E ++ M EKG PN+ TYN
Sbjct: 450 KLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYN 509
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+++ CK E + +L EM KG P+ SF L G + G+
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGD 555
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 164/323 (50%), Gaps = 3/323 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N ++ D +FK+ K + P++ N LIK L ++ + A+++++EM
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGK-GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAE 393
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G +PN+ T+ ++ G G + +A + D + +G PD TY L+DGY K +L
Sbjct: 394 NGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDS 453
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A ++++ M G+ P+ +TY ++ CK KS E + M ++ P+ ++D
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVD 513
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSI 391
LC+ KV +A +L + K PD T+ CK G I A +LF E+
Sbjct: 514 SLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVC 573
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ TYN +++ E + A +L+ M G +P+ +TY ++I GFCK+GN +G +
Sbjct: 574 HTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKF 633
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
L E ++K P+ T+F ++ L
Sbjct: 634 LLENMEKRFIPSLTTFGRVLNCL 656
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 181/385 (47%), Gaps = 4/385 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+SII + +L + K E + ++I + G P+ A+ F
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKD-AVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD 355
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ S+ NTL+ L Q L L N + +PN++T N++I LCK
Sbjct: 356 GLGKGLRPSIVLYNTLIKGLSQQGLI-LPALQLMNEMAENGCLPNIWTYNLVINGLCKMG 414
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V A ++D+ + G P++ T+ T++ GY + +++A + + +G PD TY
Sbjct: 415 CVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYN 474
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G K G+ + +++ ME+ G PN +TY +++++ CK KK EA +LL +M +
Sbjct: 475 TLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSK 534
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIHWLCKEGKIWE 378
P + C+ G ++ A +L++R+ ++ + A + I+ ++ +
Sbjct: 535 GLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNM 594
Query: 379 AKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A KLF + G P TY +I G C+ +T+ + + +EK P++ T+ ++
Sbjct: 595 AMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLN 654
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFP 462
C E + I+ ML KG P
Sbjct: 655 CLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 153/298 (51%), Gaps = 12/298 (4%)
Query: 112 CGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
C ++F T+I Y + + A + R+ + V + NTLLN L + + + V
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+FK K PN+ T NI++ +LCK V A+ +L EM S G+ P++V+ T+ G
Sbjct: 491 EIFKAMEEK-GCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDAT-TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
+ GDI+ A ++F + + V T TY +++ + + + A+K+ M+++G +P
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ TY V+I+ FCK + L + ++++++PS +V++ LC + KV +A +
Sbjct: 610 DNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGII 669
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF--DEFERGSIPSLLTYNTLIAGM 404
+L+K +P+ +TI + K+ A K+ D ++G I + TY L G+
Sbjct: 670 HLMLQKGIVPETV--NTIFE---ADKKVVAAPKILVEDLLKKGHI-AYYTYELLYDGI 721
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 230/418 (55%), Gaps = 10/418 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
++ IF +AG + H +D YH +I KL A+ F ++ LL ++K+ I E+LFI
Sbjct: 85 SMAIFQWAGS-QKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEG-IAFRESLFIC 142
Query: 120 VIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+++ YG A P A + L ++ + + + +S N +L+ LV + +F K
Sbjct: 143 IMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSK 202
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V+P V+T +++KALC ++V+ A +L +M G VPN V + T++ R +
Sbjct: 203 -GVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNE 261
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++ ++ G +PD T+ ++ G +L R+ + K++D M G PN++TYGV++
Sbjct: 262 ALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMN 321
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA-CELWKRLLRKNCM 357
C+ K EA+ LL+ + P+ +I+ + G++++A L+ ++++ C
Sbjct: 322 GLCRVGKVDEAQVLLN----KVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD +T+IH LCK+G + A + ++ G P+L+TY TL+ G C+ +L EAG +
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++M KG E N+ YN+L++ CK G + + +L EM DKGC P+ +F+ LI GL
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 185/365 (50%), Gaps = 2/365 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+N V++ R D + + K P+VFT N LI LCKK + A+ ++++M +
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G PNL+T+TT+L G+ + +E A V ++ +G+ + Y VL+ K G++ A
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ ++ EM D G +P+ T+ +I CK + +A L DML + ++ +I
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHA 529
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPS 393
G +++A +L +L + C D + +I CK G +A LFDE R +PS
Sbjct: 530 FLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS 589
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ N LI G+C ++ A L DM+ +G+ P+V TYN LI G CK+GN +E +
Sbjct: 590 NISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFN 649
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIVSDL 512
++ +G P+ +++ LI +G + ++ + + +D +W L++ + ++
Sbjct: 650 KLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEI 709
Query: 513 DSGAG 517
G
Sbjct: 710 GKENG 714
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 199/415 (47%), Gaps = 47/415 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ N TY +++ L R D + LL ++ ++ F +I Y +GR + A
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH-----FTILINGYVKSGRLDEA 363
Query: 134 VKTFL--RIEKFNVQRSVRSLNTLLNAL----VQNKRYDLVHLMFKN------------- 174
FL ++ K + V + NTL++ L + D+V+ M N
Sbjct: 364 -NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLL 422
Query: 175 -------------------SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
S F++ N+ N+L++ALCK V A+ +L EM G
Sbjct: 423 DGFCKKNQLEEAGYVLNEMSAKGFEL--NIMGYNVLLRALCKNGKVPKALDMLGEMSDKG 480
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P++ T T++ G E+A ++ D+L G + + TY L+ +++ G + +A+
Sbjct: 481 CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEAL 540
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K++++M G +E+TY +I+AFCK + +A L D+M+++ VPS+ C +I+ L
Sbjct: 541 KLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGL 600
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSL 394
C GKV +A EL + ++ + PD +++I+ LCK G I EA LF++ + G P
Sbjct: 601 CRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDA 660
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+TYNTLI C + +A L VE PN T+ +L+ F K + GI
Sbjct: 661 ITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGI 715
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 25/291 (8%)
Query: 249 RGWVPDATTYTVLMD--GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+G+ Y VL+D G K ++ D K++ ++++ G+ E + +++ + +
Sbjct: 96 KGYCHTFDVYHVLIDKLGAAKEFKVID--KLLLQIKEEGIAFRESLFICIMKYYGRANLP 153
Query: 307 GEARNLLDDMLQRKYVPSSALCCK--------VIDLLCEEGKVEDACELWKRLLRKNCMP 358
G+A +L DM CC+ V+D+L A ++ +L K +P
Sbjct: 154 GQATRMLLDM-------KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIP 206
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
++ LC ++ A L D + G +P+ + Y TLI + + + EA +L
Sbjct: 207 TVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLL 266
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++M G P+V T+N +I G C++ EG ++++ ML +G PN ++ +L+ GL
Sbjct: 267 EEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV 326
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKN 526
G E +++ V + L+ V LD L + ++KN
Sbjct: 327 GKVDEAQVLLNKVPTPNDVH---FTILINGYVKSGRLDEANAFLYDKMIKN 374
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 233/428 (54%), Gaps = 12/428 (2%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCG 113
+N D AL F +A ++H+ T + ++ L R R DA++ +L C
Sbjct: 822 RNGDAALGFFDWATS-QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC------CS 874
Query: 114 ENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
N+F I +GL AG A + + + V ++V N ++ L ++ D +
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
FK P+VFT + ++ +L K V+ A R++++M S G PN+VT++++L G
Sbjct: 935 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G ++ A + + G P+ TY ++DG+ KLGR+ +A +++EM D G +PN V
Sbjct: 995 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY V+++AFCK K+ +A L++ M+++ YVP+ ++D+ C++ +VE AC+L +
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAEL 410
++K C+P+ +T+I LCK K+ E L ++ +P ++T+NT+I MC++ +
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK-GCFPNKTSFSL 469
A L++ + E G PN+ TYN L+ G CK + +L EM K GC P+ +++
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234
Query: 470 LIEGLYES 477
+I+GL +S
Sbjct: 1235 VIDGLCKS 1242
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 249/535 (46%), Gaps = 84/535 (15%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + R + ALQ++ PN T+ +IH L RA LL E+
Sbjct: 850 LLQALLRLKRPKDALQVYRNKLCCSPNMF----TFTILIHGLCRAGDIGTAYELLKEM-- 903
Query: 107 NPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNK 163
P +N+ + VI+ A + + A++ F +E+ + V + +T++++LV++
Sbjct: 904 -PRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSG 962
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ D + ++ K PNV T + L+ LCK ++ A +L M G PN+VT+
Sbjct: 963 KVDDACRLVEDMVSK-GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 1021
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
TI+ G+ G I+ A + +++D G P+ TYTVL+D + K G+ DA+ +++ M +
Sbjct: 1022 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 1081
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G PN TY +++ FCK + A LL M+Q+ VP+ VI LC+ KV +
Sbjct: 1082 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 1141
Query: 344 ACELWKRLLRKNCMPDNAISSTII-----------------------------------H 368
L +++L NC+PD +TII H
Sbjct: 1142 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 1201
Query: 369 WLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLW--------- 417
LCK + +A+ L E R G P ++TYNT+I G+C+S + A +L+
Sbjct: 1202 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 1261
Query: 418 -DD-------------------------MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
DD M++ G +P TY LI GFCK GN + + I
Sbjct: 1262 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 1321
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
L+ +L KG +P+ +FS+ I+ L + G + G+++ +G V ++ ++N LL
Sbjct: 1322 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLL 1376
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 223/497 (44%), Gaps = 82/497 (16%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY+++I+ L+++ D LL E+ N N+F TV+ + A R E A+
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDN---GFAPNVFSYNTVLHGFCKANRVENALWLL 288
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ V S T++N L + + D +M K + + PNV T L+ C
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ--PNVITYGTLVDGFC 346
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ D++GA+ ++ +M G PN +T+ I+ + R D+E A +V ++ G PDA
Sbjct: 347 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAI 406
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE-------------------------- 290
Y+ ++ G+ K G+L +A ++++M G P+
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS 466
Query: 291 ---------VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
V Y ++I A CK K+ EA + LD M++ + P V+D LC+ ++
Sbjct: 467 IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEG----------KIWEAK----------- 380
DA L+ R+ MPD S +IH CK+ ++ EAK
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL 586
Query: 381 -----------KLFDEFER----GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
K FD F+ G P+L+TYNTLI G+C+ ++ +A + + M ++
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+ TY LI G C +E R+L EM DKGC P++ ++ L+ L ++ N V +
Sbjct: 647 TPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQ 706
Query: 486 VVSMATASGSVESDSWN 502
++ A+ E WN
Sbjct: 707 LLKEMEAT---EEGQWN 720
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 214/440 (48%), Gaps = 9/440 (2%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+L P+ + ++ R + AL F +A + + H + +++ L +A + L
Sbjct: 90 QLSPEIVGKVLQRLIDPGAALVFFEWA-ETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDL 148
Query: 101 LTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+ E + G + + T+I + AG+ A + F + + ++ ++L
Sbjct: 149 F---RSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRG 205
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L + L F+ P+ T N +I L K D ++ AIR+L+EM G P
Sbjct: 206 LCDAGQCSDAVLHFREMSKTCP--PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAP 263
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N+ ++ T+L G+ +ENA + ++ RG PD +YT +++G KL ++ +A +VM
Sbjct: 264 NVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVM 323
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
D+M G +PN +TYG +++ FC+ A L+ M +R Y P++ ++ + C
Sbjct: 324 DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRR 383
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
+E A ++ + +++ C PD STII CK GK+ EA L ++ RG P +
Sbjct: 384 NDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACL 443
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+TLI +C++A + A L + P+V Y++LI CK E L+ M+
Sbjct: 444 STLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVK 503
Query: 458 KGCFPNKTSFSLLIEGLYES 477
C+P+ +++ +++GL +S
Sbjct: 504 NRCYPDVVTYNSVVDGLCKS 523
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 205/411 (49%), Gaps = 16/411 (3%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPEL 132
S N TY S++H L +A D +LL + ++ C N+ + T+I + GR +
Sbjct: 980 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS---GCSPNIVTYNTIIDGHCKLGRIDE 1036
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTC 188
A + Q +V + LL+A + + + LV +M + VPN+FT
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG-----YVPNLFTY 1091
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N L+ CKKD+VE A ++L M G VPN+V++ T++ G + + +L
Sbjct: 1092 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 1151
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
VPD T+ ++D K R+ A ++ + ++++G PN VTY ++ CK ++ +
Sbjct: 1152 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 1211
Query: 309 ARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL +M +++ P VID LC+ +V+ A +L+ ++L PD+ S +I
Sbjct: 1212 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 1271
Query: 368 HWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK + EA + + + G P +TY TLI G C++ L +A + ++ KG
Sbjct: 1272 SSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSY 1331
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
P+V T+++ I K G ++ +LE ML G P+ +++ L++G ++
Sbjct: 1332 PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 1382
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 40/413 (9%)
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
G + I+V+ E A++ L +++ Q S + +L L+ + LV +
Sbjct: 59 GSDSPISVLERIVQGASDEQALRVAL--DEYRGQLSPEIVGKVLQRLI-DPGAALVFFEW 115
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+R ++ +F CN L+ L K A + + VT++T++ G++
Sbjct: 116 AETRDGYQ--HEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIR 173
Query: 233 RGDIENAKRVFGDILDRGW----------------------------------VPDATTY 258
G I A +F ++ +G PD+ TY
Sbjct: 174 AGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTY 233
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++G K RL DA+++++EM DNG PN +Y ++ FCK + A LL+ M+
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R P VI+ LC+ +V++AC + +++++ C P+ T++ C+ G +
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 353
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +L + ERG P+ +TYN ++ C ++ A ++ M++ G P+ Y+ +I
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
GFCK G +E +LE+M+ +GC P+ S LI+ L ++ +++ M+
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS 466
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 193/421 (45%), Gaps = 28/421 (6%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L+ M ++ ++ A Q+ + N +Y+++I L +A
Sbjct: 1086 PNLFTYNSLLDMFCKKDEVERACQLL--SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL ++ N P+I + + + Y R ++A + F I++ ++ + N+L
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTY----RVDIAYELFNLIQESGCTPNLVTYNSL 1199
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ L +++R+D + + K P++ T N +I LCK V+ A ++ +M S G
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 1259
Query: 216 MVPNLVTHTTILGGYV-WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
+ P+ VT++ ++ WR ++ A V +L G+ P A TY L+DG+ K G L A
Sbjct: 1260 LAPDDVTYSIVISSLCKWRF-MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++++ + G P+ VT+ + I+ K + +A LL+ ML+ VP + ++
Sbjct: 1319 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 1378
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL 394
C+ EDA +L++ + + C PDNA +T++ L + K L E + + +
Sbjct: 1379 FCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY---KDLLAEVSKSMVDTG 1435
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
N ++ E++ +E VE +V ++ F K G+ ++ ++ E
Sbjct: 1436 FKLNHELSSKLEAS------------IE--VEADVRLGCAIVDMFGKCGSPQDARKVFEG 1481
Query: 455 M 455
M
Sbjct: 1482 M 1482
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 166/356 (46%), Gaps = 18/356 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH-PNFSHNYDTYHSIIHKLARAR-AFDA 96
P + ++ + R+ +++ A Q+ + P + NY T S K + R A D
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE-KFNVQRSVRSLNTL 155
+E ++ P++ C L + + + EL LR+ + V + + L
Sbjct: 428 LEQMIRR-GCRPDVACLSTLIDALCKAAAIDSAQEL-----LRMSIGMDCAPDVVAYSIL 481
Query: 156 LNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
++AL + KR + +M KN + P+V T N ++ LCK + A + D M
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKN-----RCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM 536
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ G++P++VT++ ++ + ++++A ++ + + VPD TY+ L++G K G +
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A V EM G PN VTY +I+ CK K +A +L+ M ++ P S +
Sbjct: 597 DKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCL 656
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
I+ LC ++E+A + + + K C+PD T++ L K + ++L E E
Sbjct: 657 INGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 18/257 (7%)
Query: 254 DATTYTVLMDGYIKLGRLTDAV--KVMDEMEDNGV-----EPNEVTYGVMIEAFC----- 301
D V +D Y G+L+ + KV+ + D G E E G E FC
Sbjct: 76 DEQALRVALDEY--RGQLSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLL 133
Query: 302 ----KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
K + +A +L ++ ++ + +I GK+ A EL+ + RK
Sbjct: 134 NVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLK 193
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +I+ LC G+ +A F E + P +TYNT+I G+ +S L +A RL
Sbjct: 194 AHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLL 253
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++MV+ G PNVF+YN ++ GFCK + + +LE+M+ +GC P+ S++ +I GL +
Sbjct: 254 EEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKL 313
Query: 478 GNEGEVGKVVSMATASG 494
E +V+ G
Sbjct: 314 DQVDEACRVMDKMIQRG 330
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 232/442 (52%), Gaps = 9/442 (2%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
+ N+ LAL F + +F H TY ++I +L R D ++ LL +L + I C
Sbjct: 50 EPNILLALHFFKSIANSN-SFKHTPLTYTTMIKRLGYERDIDGIQYLL-QLMKLEGISCN 107
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
E+LF+ VI Y AG E A+KTF RI +F + SV+ N +L+AL+ ++ +++ ++
Sbjct: 108 EDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYN 167
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
N + + NV+T N+L+KALCK D V+ A ++L EM G +P+ V++TT++
Sbjct: 168 NMKRD-GIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRL 226
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G +E A+ + I + +VP Y L++G+ + ++ + ++ +EM G++P+ +TY
Sbjct: 227 GKVEEARELSMRI--KSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITY 281
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I + A +L M R P+ ++ G++ +A +LW R+++
Sbjct: 282 STVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQ 341
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTE 412
+ P+ +T+IH LC GK+ EA + + ER G P+ TY+TLI G ++ +L
Sbjct: 342 EGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVG 401
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A +W+ M+ G PNV Y ++ C+ + ++E M + C PN +F+ I+
Sbjct: 402 ASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIK 461
Query: 473 GLYESGNEGEVGKVVSMATASG 494
GL SG KV++ G
Sbjct: 462 GLCCSGKTEWAMKVLNQMRQYG 483
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 201/428 (46%), Gaps = 8/428 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+ ++ L + DA LL E+ I + + TV+ + G+ E A +
Sbjct: 177 NVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVS-YTTVVSSMCRLGKVEEAREL 235
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+RI+ F V N L+N + + + V +F N + P+V T + +I L
Sbjct: 236 SMRIKSF-----VPVYNALINGFCREHKMEEVFELF-NEMAVEGIDPDVITYSTVINTLS 289
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +VE A+ VL +M G PN+ T T+++ GY G + A ++ ++ G P+
Sbjct: 290 EMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTV 349
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+ G G++ +AV V +ME NGV PNE TY +I+ F K A + + M
Sbjct: 350 AYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM 409
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ +P+ + ++D+LC A L + + NC P+ +T I LC GK
Sbjct: 410 ITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKT 469
Query: 377 -WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
W K L + G P++ TYN ++ G+ + EA ++ ++ E ++ N+ TYN +
Sbjct: 470 EWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTI 529
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ GFC G K ++I ++L G P+ +++ +I + G ++V T G
Sbjct: 530 LSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGE 589
Query: 496 VESDSWNF 503
D + +
Sbjct: 590 GYPDVFTY 597
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 174/378 (46%), Gaps = 50/378 (13%)
Query: 145 VQRSVRSLNTLLNALVQNKRYD----LVHLMFKNS---RHKFKVVPNVFTCNILIKALCK 197
+Q + LN L + V NK + L+ L F S + FK P +T +IK L
Sbjct: 28 LQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYT--TMIKRLGY 85
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ D++G +L M G+ N ++ Y G E A + F I + G P
Sbjct: 86 ERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKI 145
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++D + + + + M+ +G+E N TY ++++A CK + AR LL +M
Sbjct: 146 YNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMS 205
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ +P + V+ +C GKVE+A EL R+ K+ +P + + +I+ C+E K+
Sbjct: 206 YKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRI--KSFVP---VYNALINGFCREHKME 260
Query: 378 EAKKLFDE------------------------------------FERGSIPSLLTYNTLI 401
E +LF+E F RG P++ T+ +L+
Sbjct: 261 EVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLM 320
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G L EA LW+ M+++G EPN YN LI G C G E + + ++M G F
Sbjct: 321 KGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVF 380
Query: 462 PNKTSFSLLIEGLYESGN 479
PN+T++S LI+G ++G+
Sbjct: 381 PNETTYSTLIDGFAKAGD 398
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 176/419 (42%), Gaps = 78/419 (18%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++I+ L+ VE L L + C N+ F ++++ Y + GR A+ +
Sbjct: 280 TYSTVINTLSE---MGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ + + + + NTL++ L K + V + K R+ V PN T + LI
Sbjct: 337 NRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG--VFPNETTYSTLIDGFA 394
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHT-------------------------------- 224
K D+ GA + ++M + G +PN+V +T
Sbjct: 395 KAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTI 454
Query: 225 ---TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T + G G E A +V + G P+ TTY ++DG R +A++++ E+
Sbjct: 455 TFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E+ ++ N VTY ++ FC A + +L P S VI C++G+V
Sbjct: 515 EEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEV 574
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLI 401
+ A +L RL +K EG P + TY +L+
Sbjct: 575 KTAIQLVDRLTKKG-----------------EG----------------YPDVFTYTSLL 601
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG-FCKIGNAKEGIRILEEMLDKG 459
G+C + EA D M+ +G+ PN T+N L++G F K+G+ I I++ +L G
Sbjct: 602 WGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGP-IHIVDNILANG 659
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 250/494 (50%), Gaps = 14/494 (2%)
Query: 25 SLSTITVTPPIKPWPQR---LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTY 81
SL + T P+ P P L+ + + R+ N+ ALQ F Y F H TY
Sbjct: 18 SLPLVLATRPLNPPPSSASLLHESHVAHALRREPNVLYALQHFQYLTNTLA-FKHTPLTY 76
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
H +I KL R DA+ +L ++K I C ++ FI V+ +Y +G + A+K F RI+
Sbjct: 77 HVMIEKLGRNSELDALHYILHQMKIE-RIPCSQDSFICVLNSYKNSGLGDRALKMFYRIK 135
Query: 142 KFNVQRSVRSLNTLLNALV--QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+F + +V+ N LL+AL+ ++ ++ +++N R + + PNVFT N+L+KALCK
Sbjct: 136 EFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGE-GMEPNVFTYNVLLKALCKNG 194
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++GA ++L EM G VP+ V++TT++ G +E A+ V G V +
Sbjct: 195 KLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVV---SVCN 251
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G + GR+ + +MDEM NGV+PN V+Y +I + A +L M++R
Sbjct: 252 ALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRR 311
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ G+V + LW+ ++ + P+ + +T+++ LC G + EA
Sbjct: 312 GCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEA 371
Query: 380 KKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+ E+ P++ TY+TL+ G ++ +L A +W+ MV GV PNV Y ++
Sbjct: 372 VDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVD 431
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV- 496
CK + R+++ M GC P +F+ I+GL G +VV G +
Sbjct: 432 VLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLP 491
Query: 497 ESDSWNFLLTRIVS 510
++ ++N LL + S
Sbjct: 492 DTRTYNELLDGLFS 505
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 15/391 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N +Y S+I L+ VE L L + C N+ F ++++ Y L GR V
Sbjct: 281 NVVSYSSVISWLSDV---GEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGV 337
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + V+ +V NTLLN L + + D+ M K+ + PNV T +
Sbjct: 338 GLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCR----PNVTTYST 393
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ K D++GA V ++M + G+ PN+V +T+++ + A R+ ++ G
Sbjct: 394 LVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDG 453
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P T+ + G GR+ A++V+D+M+ G P+ TY +++ + EA
Sbjct: 454 CPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEAC 513
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L+ ++ +RK + V+ GK E ++ R+L PD + +I+
Sbjct: 514 ELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAY 573
Query: 371 CKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
K GK+ A + D G P ++ + +L+ G+C S + EA + M+ KG+ PN
Sbjct: 574 SKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPN 633
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ T+++L++GF K IRIL+++L KG
Sbjct: 634 IATWDVLVRGFFKKLGHMGPIRILDDILGKG 664
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 232/442 (52%), Gaps = 8/442 (1%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
RL + R + +D I + P + N TY +I L ++ D LL E++
Sbjct: 29 RLFEALLRARRIDETCHILKNG--WPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMR 86
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
++ + ++ VI A A+ F +E +++V + +++ L + R
Sbjct: 87 ESGPVP-DAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKANRL 142
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
F + K VPN +T N+LI CK V A +L EM G+ PN+VT++T
Sbjct: 143 PEATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYST 201
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G+ + ++ A ++F +++ G +P+ TY L+ G + G + +A +++DEM + G
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
++P++ +Y ++ CK K A + +D P +I LC+ G++++AC
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEAC 321
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGM 404
+L++++ +C PD + ++ LCK ++ EA+++ + E R P+++TY++LI G+
Sbjct: 322 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 381
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C++ ++ +A ++ M+ +G+EPNV TYN LI GFC + ++EEM GC P+
Sbjct: 382 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 441
Query: 465 TSFSLLIEGLYESGNEGEVGKV 486
+++ LI+GL ++G E ++
Sbjct: 442 ITYNTLIDGLCKTGRAPEANRL 463
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 227/479 (47%), Gaps = 39/479 (8%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ------ 106
RQ +D A ++F N TY++++ L R D LL E+++
Sbjct: 208 RQTKVDTAYKLFRQM--VENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 265
Query: 107 --------------------------NPEIKCGENL--FITVIRNYGLAGRPELAVKTFL 138
N C ++ + T+I AGR + A K F
Sbjct: 266 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFE 325
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++ + + + V + L++ L + R + + + PNV T + LI LCK
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR-NCTPNVITYSSLIDGLCKT 384
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A V M G+ PN+VT+ +++ G+ +++A + ++ G +PD TY
Sbjct: 385 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 444
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+DG K GR +A ++ +M+ P+ +TY +I FCK ++ AR L DDML+
Sbjct: 445 NTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLK 504
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ +P +++ C G V+DA L + ++ +C PD ++++ CK G++ E
Sbjct: 505 QAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVE 564
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++ +RG P+++TY LI C + + T A RL ++MV GV+PNV TY LI
Sbjct: 565 ARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIG 624
Query: 438 GFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
GFC G+ +E +ILE + D+ C + ++ ++++GL +G +++ SG+
Sbjct: 625 GFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGT 683
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 215/419 (51%), Gaps = 9/419 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I+ + LL E+K++ P + + TVI + + + A K
Sbjct: 163 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV----TYSTVIHGFCRQTKVDTAYKL 218
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + ++ + NTLL+ L +N D + + R + + P+ F+ + L+ LC
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER-GLQPDKFSYDTLMAGLC 277
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A++V ++ + P++V ++T++ G G ++ A ++F + + PD
Sbjct: 278 KTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV 337
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T LMDG K RL +A +V++ MED PN +TY +I+ CK + +A+ + M
Sbjct: 338 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 397
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R P+ +I C V+ A L + + C+PD +T+I LCK G+
Sbjct: 398 IVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 457
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA +LF + + + P ++TY+ LI G C+ + A L+DDM+++ V P+V T++ L
Sbjct: 458 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 517
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++G+C G + R+LEEM+ C P+ +++ L++G + G E +V+ G
Sbjct: 518 VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 226/461 (49%), Gaps = 14/461 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIF--HYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + L++ + + +D+AL++F + G P+ Y ++I L +A D
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV----AYSTLIAGLCKAGRLDE 319
Query: 97 VESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
L ++++N C ++ F ++ R + A + +E N +V + ++
Sbjct: 320 ACKLFEKMREN---SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L++ L + + +FK + + PNV T N LI C + V+ A+ +++EM +
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVR-GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G +P+++T+ T++ G G A R+FGD+ + PD TY+ L+ G+ KL R+ A
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ D+M V P+ VT+ ++E +C +A LL++M+ P ++D
Sbjct: 496 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 555
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
C+ G++ +A + KR+ ++ C P+ + +I C+ GK A +L +E G P+
Sbjct: 556 FCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPN 615
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDM-VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++TY +LI G C + +L EA ++ + + ++ + ++F Y +++ G C+ G + +L
Sbjct: 616 VITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELL 675
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
E + G P + LI GL + G+ +V+ T S
Sbjct: 676 EAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 167/337 (49%), Gaps = 33/337 (9%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
NV+T N L +AL + ++ +L G+ PN+ T+ ++ G GD++ A +
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 244 GDILDRGWVPDAT--------------------------------TYTVLMDGYIKLGRL 271
++ + G VPDA T+T+++DG K RL
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A +M+ G PNE TY V+I FCK K A LL +M + P+ V
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I C + KV+ A +L+++++ CMP+ +T++ LC+ G + EA +L DE ERG
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P +Y+TL+AG+C++ ++ A ++++D P+V Y+ LI G CK G E +
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ E+M + C P+ +F+ L++GL + E +V+
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 169/309 (54%), Gaps = 4/309 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ NTL++ L + R + +F + + KF P+V T + LI CK + ++ A + D+
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDD 501
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M ++P++VT +T++ GY G +++A+R+ +++ PD TYT L+DG+ K+GR
Sbjct: 502 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 561
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A +V+ M G +PN VTY +I+AFC+ K A LL++M+ P+
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRS 621
Query: 331 VIDLLCEEGKVEDACELWKRLLR-KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER- 388
+I C G +E+A ++ +RL R +NC D ++ LC+ G++ A +L + ++
Sbjct: 622 LIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 681
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDM-VEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G+ P Y LI G+C+ EL +A + ++M + + PN Y +IQ + G +E
Sbjct: 682 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 741
Query: 448 GIRILEEML 456
+ +E+L
Sbjct: 742 ANALADELL 750
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 69/323 (21%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G+ + TY L + ++ R+ + ++ G+ PN TY V+I+ CK +
Sbjct: 18 QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDK 77
Query: 309 ARNLLDDMLQRKYVPSSAL-------CCK-------------------------VIDLLC 336
A LL++M + VP +A+ CK +ID LC
Sbjct: 78 ACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLC 137
Query: 337 EEGKVEDACELWKRLLRKNCMPD----------------------------------NAI 362
+ ++ +A + ++ +K +P+ N +
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 197
Query: 363 S-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ ST+IH C++ K+ A KLF + E G +P+L+TYNTL++G+C + + EA L D+M
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
E+G++P+ F+Y+ L+ G CK G +++ E+ + C P+ ++S LI GL ++G
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRL 317
Query: 481 GEVGKVVSMATASGSVESDSWNF 503
E K+ S E D F
Sbjct: 318 DEACKLFE-KMRENSCEPDVVTF 339
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 10/278 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE-LKQN--PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +I + D +L + LKQ P++ F T++ Y AG + A +
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV----TFSTLVEGYCNAGLVDDAERL 533
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + V + +L++ + R + K K PNV T LI A C
Sbjct: 534 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM-AKRGCQPNVVTYTALIDAFC 592
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI-LDRGWVPDA 255
+ A R+L+EM G+ PN++T+ +++GG+ GD+E A+++ + D D
Sbjct: 593 RAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADM 652
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y V+MDG + GR++ A+++++ ++ +G P Y +I C+GK+ G+A +L++
Sbjct: 653 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 712
Query: 316 M-LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
M L RK P++ VI L EG+ E+A L LL
Sbjct: 713 MTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 5/244 (2%)
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G + N TY + EA + ++ E ++L + P+ VI LC+ G +
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLI 401
+ ACEL + + +PD AI + +IH LCK +A F E +++T+ +I
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME--CEKNVITWTIMI 133
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+C++ L EA + M +KG PN +TYN+LI GFCK+ +L+EM + G
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD--LDSGAGA 518
PN ++S +I G K+ +G + + ++N LL+ + + +D
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253
Query: 519 LDEL 522
LDE+
Sbjct: 254 LDEM 257
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 236/468 (50%), Gaps = 38/468 (8%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + ++I Q++ AL++F+ K F H TY SII KL F+A+E +L
Sbjct: 5 LLPKHVTTVIRCQKDPMKALEMFNSMRK-EDGFKHTLSTYRSIIEKLGLYGKFEAMEEVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+++QN E +++ ++NYG G+ + AV F R++ ++ + +V S N +++ LV
Sbjct: 64 VDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVD 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ +D H ++ R + + P+V++ I +K+ C+ A+R+L+ M S G N+V
Sbjct: 124 SGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVV 182
Query: 222 THTTILGGYVW-----------------------------------RGDIENAKRVFGDI 246
+ T++GG+ +GD++ +++ +
Sbjct: 183 AYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKV 242
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG +P+ TY + G + G L AV+++ + D G +P+ VTY +I CK K
Sbjct: 243 IKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKF 302
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA L ++ P S +I C+ G V+ A + + +PD ++
Sbjct: 303 QEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSL 362
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I LC EG+ A LF+E +G P+++ YNTLI G+ + EA +L +M EKG+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
P V T+N+L+ G CK+G + +++ M+ KG FP+ +F++LI G
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 224/454 (49%), Gaps = 20/454 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y++I+ L + FD + ++ P++ F ++++ RP A++
Sbjct: 113 SYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYS----FTIRMKSFCRTSRPHAALRL 168
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + +V + T++ + ++ Y+L M + V + T N L+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASG-----VSLCLSTFNKLL 223
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCKK DV+ ++LD++ G++PNL T+ + G +G+++ A R+ G ++D+G
Sbjct: 224 HVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPK 283
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L+ G K + +A + ++ + G+EP+ TY +I +CKG A +
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L + + +VP +ID LC EG+ A L+ L K P+ + +T+I L
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+G I EA +L E E+G IP + T+N L+ G+C+ +++A L M+ KG P++FT
Sbjct: 404 QGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+N+LI G+ + + IL+ M+D G P+ +++ L+ GL ++ +V +
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523
Query: 492 ASGSVES-DSWNFLLTRI--VSDLDSGAGALDEL 522
G + ++N LL + LD G L+E+
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEM 557
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 210/450 (46%), Gaps = 5/450 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I+ L + F E L +L N ++ + T+I Y G +LA + +
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKL-VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVN 346
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ +L++ L + +F + K + PNV N LIK L +
Sbjct: 347 AVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGLSNQG 405
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ EM G++P + T ++ G G + +A + ++ +G+ PD T+
Sbjct: 406 LILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ GY ++ +A++++D M DNGV+P+ TY ++ CK K + M+++
Sbjct: 466 ILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEK 525
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +++ LC K++ A L + + K+ PD T+I CK G + A
Sbjct: 526 GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 380 KKLFDEFERGSIPSLL--TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
LF + E + S TYN +I E +T A +L+ +MV++ + P+ +TY +++
Sbjct: 586 YTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
GFCK GN G + L EM++ G P+ T+ +I L E ++ G V
Sbjct: 646 GFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV- 704
Query: 498 SDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
++ N + ++ + L++LL K+C
Sbjct: 705 PEAVNTIFDHDKKEVAAPKLVLEDLLKKSC 734
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 212/406 (52%), Gaps = 8/406 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F H + TY ++I KL R D V LL ++K + C + LF VI+ Y + E
Sbjct: 70 FKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKL-ENVPCSQELFQFVIKCYRRSNLGEQG 128
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+K F RI +F + SV+ N +L+AL+ + +++ ++ N + + + PNVFT N+L+K
Sbjct: 129 LKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSE-GLEPNVFTYNVLLK 187
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
ALC+ V+GA ++L EM + G P+ V++TT++ GD++ A+ L + P
Sbjct: 188 ALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARE-----LAMKFEP 242
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
Y L+ G K R +A +M+EM D GV+PN ++Y +I + +
Sbjct: 243 VVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVF 302
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M R P+ +I G+V DA LW ++R+ P+ +T+IH LC +
Sbjct: 303 GRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSD 362
Query: 374 GKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + EA ++++ E+ SI P++ TY+T+I G +S +L A W+ M+ G PNV Y
Sbjct: 363 GNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVY 422
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ C++ + +++ M+ GC P +F+ I+GL +G
Sbjct: 423 TCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAG 468
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 43/351 (12%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N Y+++IH L D S+ +++++ I+ + T+I + +G A
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKD-SIRPNVTTYSTIIYGFAKSGDLVSAC 404
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+T+ ++ + +V +++ L Q ++ +DL+ M + P V T N
Sbjct: 405 ETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDG-----CPPTVITFNN 459
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
IK LC+ VE A+ VLD+M +PN+ T+ +L G A + ++ +R
Sbjct: 460 FIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERK 519
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
D TY +M G+ G ++++ +M NG++ + +T + A+CK K A
Sbjct: 520 VEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAI 579
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+LD++ K + + +I LW I +WL
Sbjct: 580 KVLDNISAEKEFRADIITHTII--------------LWG----------------ICNWL 609
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
E + L + +RG P++ T+N L+ G R+ DD++
Sbjct: 610 GTEEAVV---YLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDII 657
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 211/406 (51%), Gaps = 8/406 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F H TY +I KL R D V+ LL ++K I C E+LFI VI Y G E A
Sbjct: 75 FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEG-ISCSEDLFINVINTYRRVGLAEQA 133
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+K F RI +F Q +V+ N LL+A++ R+ ++ ++ N + K PNV+T NIL+K
Sbjct: 134 LKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGK-EPNVYTYNILLK 192
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
ALCK + V+GA ++L EM + G P++V++TT++ G +E A+ L + P
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARE-----LSIRFQP 247
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + Y L++G+ + ++ + ++ +M + G++PN +TY +I + A +
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M R P+ ++ G+V +A +W R+ + P+ +T+IH LC
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
GK+ EA + + ER G P++ TY LI G ++ +L A +W+ M+ G PNV Y
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY 427
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ C+ + ++E+M C PN +F+ I+GL SG
Sbjct: 428 TSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSG 473
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 196/398 (49%), Gaps = 14/398 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N TY+ ++ L + D LL E+ P++ + TVI + G+ E A
Sbjct: 183 NVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVS----YTTVISSMSKLGKVEEA 238
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ +R Q +V N L+N + + V L+ K + PNV T + +I
Sbjct: 239 RELSIRF-----QPNVSVYNALINGFCREYKVKEVFLLLGQMVEK-GIDPNVITYSTVIS 292
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+L +VE A+ V +M G PN+ T T+++ GY RG + A ++ + + G+ P
Sbjct: 293 SLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEP 352
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ Y L+ G G++ +AV V +ME NG PN TYG +I+ F K A +
Sbjct: 353 NVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIW 412
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ M+ +P+ + ++++LC A L +++ NC P+ +T I LC
Sbjct: 413 NKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCS 472
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ A LF + E+ G P++ TYN ++ G+ + + EA L +M EKG+E N+ TY
Sbjct: 473 GRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTY 532
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
N + GFC +G +E +++L +ML G P+ +++ L
Sbjct: 533 NTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTL 570
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 189/415 (45%), Gaps = 16/415 (3%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYG 125
+F PN S Y+++I+ R V LL ++ + +P + + TVI +
Sbjct: 244 RFQPNVS----VYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVIT----YSTVISSLS 295
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPN 184
G ELA+ + ++ +V + +L+ R + +++ + + F+ PN
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFE--PN 353
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
V N LI LC + A+ V +M G PN+ T+ ++ G+ GD+ A ++
Sbjct: 354 VVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWN 413
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
++ G +P+ YT +++ + + A ++++M + PN VT+ I+ C
Sbjct: 414 KMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSG 473
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ A NL M Q P+ +V+D L +E ++++A EL + K + +
Sbjct: 474 RVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYN 533
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
TI C GK EA KL + G + P +TYNTL C ++ A +L D +
Sbjct: 534 TIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAG 593
Query: 424 GV-EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
G P V Y L+ G C +E + L++ML++G N +++ L+ GL+ S
Sbjct: 594 GKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 6/310 (1%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T I+I+ L ++ DV+G +L +M G+ + ++ Y G E A ++F
Sbjct: 80 LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
I + G P Y L+D + R + M+ +G EPN TY ++++A CK +
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A LL +M + P VI + + GKVE+A EL R P+ ++ +
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNA 254
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ C+E K+ E L + E+G P+++TY+T+I+ + + A +W M +G
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG 314
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
PNV+T+ L++G+ G E + I M ++G PN +++ LI GL G GE
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAV 374
Query: 485 KVVSMATASG 494
V S +G
Sbjct: 375 SVSSKMERNG 384
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 244/483 (50%), Gaps = 20/483 (4%)
Query: 36 KPWPQRLYP----KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA 91
+P P R+Y RL++ + Q + + AL++ + A +F+ + Y I+ KL A
Sbjct: 44 RPAPLRVYAISDQDRLLAALREQSDPEAALRMLNSALA-REDFAPSSAVYEEIVQKLGTA 102
Query: 92 RAFDAVESLLTELKQNPEIKCGENLFITVIRN----YGLAGRPELAVKTFLRI---EKFN 144
AFD +E L+ E+++ G + V+R+ Y R + AV L + F
Sbjct: 103 GAFDLMEGLVREMRRE-----GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFG 157
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
VQ N LLN LV+ + L+ ++ N + P+V T N LIKALC+ V A
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVY-NEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L+EM S G+ P+ T TT++ G++ G IE A RV +++ G P T VL++G
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y K+GR+ DA+ + + +G EP++VTY + C+ A ++D MLQ + P
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
VI+ L + G++++A + +++ + C+PD +T+I L + ++ EA L
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396
Query: 385 EFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E +G P + T+N LI +C+ + RL+++M G P+ TYN+LI C +G
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWN 502
+ +L EM GC + +++ +I+ L + E +V A G S + ++N
Sbjct: 457 KLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFN 516
Query: 503 FLL 505
L+
Sbjct: 517 TLI 519
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 5/401 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T +++I L RA +L E+ + + E F T+++ + G E A++ +
Sbjct: 199 TLNTLIKALCRAHQVRTAVLMLEEMSSHG-VAPDETTFTTLMQGFIEEGSIEAALRVKAK 257
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + ++N L+N + R D + + + F+ P+ T N + LC+
Sbjct: 258 MMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE--PDQVTYNTFVHGLCQN 315
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A++V+D M G P++ T+ T++ G+++ AK + ++DRG +PD TT+
Sbjct: 316 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 375
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ RL +A+ + E+ G+ P+ T+ ++I A CK L ++M
Sbjct: 376 NTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS 435
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC GK+ +A +L + C +TII LCK+ +I E
Sbjct: 436 SGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEE 495
Query: 379 AKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++FD+ + I S +T+NTLI G+C++ + +A L + MV++G++PN TYN ++
Sbjct: 496 AEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILT 555
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CK GN K+ ILE M G + ++ LI GL ++G
Sbjct: 556 HYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 168/331 (50%), Gaps = 2/331 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V + NT++N L +N D + N +P+ T N LI AL ++ +E A+ +
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIV-NQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
E+ G+ P++ T ++ GD R+F ++ G PD TY +L+D +
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G+L +A+ +++EME NG + VTY +I+A CK + EA + D M + S+
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
+ID LC+ +++DA EL ++++++ P+N ++I+ CK+G I +A + +
Sbjct: 516 NTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA 575
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G ++TY TLI G+C++ A +L M KG+ P YN +IQ + N ++
Sbjct: 576 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 635
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + EM + G P+ ++ ++ L G
Sbjct: 636 ALNLFREMTEVGEPPDALTYKIVFRSLCRGG 666
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 185/410 (45%), Gaps = 19/410 (4%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+DL LQ H F TY+++I+ L++ D + ++ ++ P+
Sbjct: 325 MDLMLQEGHDPDVF---------TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT- 374
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
F T+I R E A+ + + V + N L+NAL + L +F+
Sbjct: 375 ---FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFE 431
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ P+ T NILI LC + A+ +L+EM S G + VT+ TI+ +
Sbjct: 432 EMKSS-GCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKK 490
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
IE A+ VF + +G A T+ L+DG K R+ DA +++++M G++PN +TY
Sbjct: 491 MRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITY 550
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ +CK +A ++L+ M + +I+ LC+ G+ + A +L + +
Sbjct: 551 NSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRI 610
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA-ELT 411
K P + +I L + + +A LF E E G P LTY + +C +
Sbjct: 611 KGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIK 670
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
EA +MV KG P ++ ML +G +G I +E +++K F
Sbjct: 671 EAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKF 720
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 232/447 (51%), Gaps = 2/447 (0%)
Query: 51 IFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
+F + D+ ++ K F H TY S++ KL F+ +E+LL+E++ N +
Sbjct: 92 VFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDN 151
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
E +++ +R YG G+ + AV TF R++ FN SV S N ++N LV+ ++ H
Sbjct: 152 TLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHK 211
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
++ + K KV +V+T I IK+ C+ A+R+L MP +G N V + T++ G+
Sbjct: 212 VYMRMKDK-KVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGF 270
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
GD + A+ +F ++L+ PD TT+ L+ K G + ++ ++ D++ GV PN
Sbjct: 271 YEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNL 330
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
T+ + I+ CK A LL + + P VI LC + +V +A E +
Sbjct: 331 FTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHK 390
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAE 409
++ P++ ++II CK+G + +A ++ D +G P TY +L+ G C+ +
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGD 450
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+A ++ D + KG+ P++ YN LI+G C+ G ++++ EM +KGC P+ +++L
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSV 496
+I GL + G + ++ A G +
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCI 537
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 207/416 (49%), Gaps = 3/416 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++I++ L F+ + +K + +++ + I+++ GRP A++
Sbjct: 192 SYNAIMNILVEFGYFNQAHKVYMRMK-DKKVESDVYTYTIRIKSFCRTGRPYAALRLLRN 250
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + T++ + D +F + + + P+V T N L+ ALCKK
Sbjct: 251 MPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF-DEMLECCLCPDVTTFNKLVHALCKKG 309
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V + R+ D++ G+ PNL T + G G ++ A R+ G + G PD TY
Sbjct: 310 FVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYN 369
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ G + R+ +A + + +M + G EPN+ TY +I+ +CK +A +L D + +
Sbjct: 370 TVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFK 429
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P C +++ C++G + A ++K L K P + +T+I LC++G I A
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E E+G P + TYN +I G+C+ L++A L D + KG P++FTYN L+ G
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+C+ I ++ M +G P+ +++ L+ GL ++ EV ++ T G
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 168/323 (52%), Gaps = 3/323 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N Q+ D +FK+ K + P++ N LIK LC++ + A+++++EM
Sbjct: 440 SLVNGFCQDGDPDQAMAVFKDGLGK-GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAE 498
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++ T+ I+ G G + +A + GD + +G +PD TY L+DGY + +L
Sbjct: 499 KGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDS 558
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++ M G+ P+ +TY ++ CK KS E + M ++ P+ +I+
Sbjct: 559 AIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIE 618
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS 393
LC KV +A +L + K PD T+I CK G + A LF E+ S
Sbjct: 619 SLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVS 678
Query: 394 --LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
TYN +I+ E + A RL+ +M + G +P+ +TY +LI GFCK GN +G +
Sbjct: 679 HTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKF 738
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
L E ++KG P+ T+F ++ L
Sbjct: 739 LLENIEKGFIPSLTTFGRVLNCL 761
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 157/299 (52%), Gaps = 2/299 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ FT L+ C+ D + A+ V + G+ P+++ + T++ G +G I A ++
Sbjct: 433 PDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQL 492
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ ++G PD TY ++++G K+G L+DA ++ + G P+ TY +++ +C+
Sbjct: 493 MNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCR 552
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K A L++ M + P +++ LC+ K E+ E++K + K C P+
Sbjct: 553 QLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIIT 612
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+TII LC K+ EA L E + +G P ++++ TLI G C+ +L A L+ M
Sbjct: 613 YNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGME 672
Query: 422 EK-GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++ V TYN++I F + N K +R+ EM GC P+ ++ +LI+G ++GN
Sbjct: 673 KQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGN 731
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 145/283 (51%), Gaps = 7/283 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY+ II+ L + L+ + C ++F T++ Y + + A++
Sbjct: 507 TYNLIINGLCKMGCLSDANHLIGDAITKG---CIPDIFTYNTLVDGYCRQLKLDSAIELV 563
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ + V + NTLLN L + + + V +FK K PN+ T N +I++LC
Sbjct: 564 NRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEK-GCAPNIITYNTIIESLCN 622
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT- 256
V A+ +L EM S G+ P++V+ T++ G+ GD++ A +F + + V T
Sbjct: 623 SKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTA 682
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +++ + + + A+++ EM+ NG +P+ TY V+I+ FCK + L +
Sbjct: 683 TYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN 742
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+++ ++PS +V++ LC E KV++A + +++K+ +PD
Sbjct: 743 IEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 127/286 (44%), Gaps = 9/286 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P LV RQ LD A+++ + + + + TY+++++ L + E
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRM--WSQGMTPDVITYNTLLNGLCKTAK---SE 592
Query: 99 SLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
++ K E C N+ + T+I + + + AV ++ + V S TL+
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ D + +F+ ++ V T NI+I A ++ +++ A+R+ EM G
Sbjct: 653 TGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGC 712
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P+ T+ ++ G+ G++ + + +++G++P TT+ +++ ++ +AV
Sbjct: 713 DPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVG 772
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
++ M + P+ V + EA KG + A L D ++ K +
Sbjct: 773 IIHLMVQKDIVPDTVN--TIFEADKKGHITYHAYEFLYDGVRDKKI 816
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 240/450 (53%), Gaps = 7/450 (1%)
Query: 27 STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIH 86
+T T+ P K P+ + + +++I R+ + AL+IF+ + FSHN TY +I+H
Sbjct: 44 ATTTMVEPRKK-PKFISHESAINLIKRETDPQRALEIFNRVAE-QRGFSHNNATYATILH 101
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQ 146
KLA+++ F A++++L ++ K E +F+ +++++ E V+ F I +
Sbjct: 102 KLAKSKKFQAIDAVLHQMTYE-TCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVRE 160
Query: 147 R-SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ S+++++T LN LV++ + DL NS+ + PN NIL+K CK D++ A
Sbjct: 161 KPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAF 220
Query: 206 RVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMD 263
V++EM S PNL+T++T++ G G ++ A +F +++ + + PDA TY L++
Sbjct: 221 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 280
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ ++ A+K+M+ M+ NG PN Y ++ FCK + EA+ + D+M P
Sbjct: 281 GFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKP 340
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ +I+ C G+V++A EL K + C D + I+ LC+EG+ EA+ +
Sbjct: 341 DTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGML 400
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ G + +Y ++ +C EL +A +L M+ +GV P+ T N L+ C+
Sbjct: 401 ERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEA 460
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
G + + L +L+ G P S++LL+E
Sbjct: 461 GKVGDAVMALLGLLELGFKPEPNSWALLVE 490
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 143/299 (47%), Gaps = 14/299 (4%)
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRS 151
AF+ VE + P + + T+I +GR + A++ F + K + +
Sbjct: 219 AFEVVEEMKKSHVSYPNLIT----YSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALT 274
Query: 152 LNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
N L+N ++ D ++ M KN + PNVF + L+ CK+ +E A V
Sbjct: 275 YNALINGFCHGEKVDRALKIMEFMKKNGCN-----PNVFNYSALMNGFCKEGRLEEAKEV 329
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
DEM S+G+ P+ V +TT++ + G ++ A + D+ + D T+ V++ G +
Sbjct: 330 FDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCR 389
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GR +A +++ + GV N+ +Y +++ + C+ + +A L+ ML R +P A
Sbjct: 390 EGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFAT 449
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+++ LCE GKV DA LL P+ + ++ +C+E K+ A +L D+
Sbjct: 450 SNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDL 508
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 162/356 (45%), Gaps = 44/356 (12%)
Query: 130 PELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFT 187
P+ A++ F R+ E+ + + T+L+ L ++K++ + ++ + + K +F
Sbjct: 73 PQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFL 132
Query: 188 CNILIKALCKKDDVEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKR-VFGD 245
L+K K E + + D + P + P+L +T L V ++ ++ +
Sbjct: 133 N--LMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNS 190
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGK 304
P+ + +L+ + K G + A +V++EM+ + V PN +TY +I
Sbjct: 191 KKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLING----- 245
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN-CMPDNAIS 363
LC G++++A EL++ ++ K+ +PD
Sbjct: 246 ------------------------------LCGSGRLKEAIELFEEMVSKDQILPDALTY 275
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I+ C K+ A K+ + ++ G P++ Y+ L+ G C+ L EA ++D+M
Sbjct: 276 NALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKS 335
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G++P+ Y LI FC+ G E + +L++M + C + +F++++ GL G
Sbjct: 336 LGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREG 391
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 149/349 (42%), Gaps = 44/349 (12%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILD-RGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P ++H + + D + A +F + + RG+ + TY ++ K +
Sbjct: 55 PKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDA 114
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-------------------- 316
V+ +M + +E + +++ F K + D +
Sbjct: 115 VLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLL 174
Query: 317 -------LQRKYV----------PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
L RK++ P++ + ++ C+ G ++ A E+ + + + +
Sbjct: 175 VESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYP 234
Query: 360 NAIS-STIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
N I+ ST+I+ LC G++ EA +LF+E + +P LTYN LI G C ++ A ++
Sbjct: 235 NLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKI 294
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ M + G PNVF Y+ L+ GFCK G +E + +EM G P+ ++ LI
Sbjct: 295 MEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCR 354
Query: 477 SGNEGEVGKVVS-MATASGSVESDSWNFLLTRIVSD--LDSGAGALDEL 522
+G E +++ M ++ ++N +L + + + G L+ L
Sbjct: 355 AGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERL 403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF--ITVIRNYGLAGRPELAVKTF 137
TY+++I+ D ++ +K+N C N+F ++ + GR E A + F
Sbjct: 274 TYNALINGFCHGEKVDRALKIMEFMKKN---GCNPNVFNYSALMNGFCKEGRLEEAKEVF 330
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ ++ TL+N + R D + K+ R K + T N+++ LC+
Sbjct: 331 DEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMREN-KCRADTVTFNVILGGLCR 389
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E A +L+ +P G+ N ++ +L G+++ A ++ G +L RG +P T
Sbjct: 390 EGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFAT 449
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ + G++ DAV + + + G +P ++ +++E C+ +K A LLDD++
Sbjct: 450 SNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 247/502 (49%), Gaps = 59/502 (11%)
Query: 42 LYPKRLVSMIFRQQNLD--LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
++ +V + R L+ +L F + K NF N +Y ++H L+R R +D +
Sbjct: 65 VFSDDIVDAVLRNLRLNPTASLGFFQFVSK-QQNFRPNVKSYCKLVHILSRGRMYDETRA 123
Query: 100 LLTELKQ------------------NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
L +L E +F +++ Y G + A+ F +
Sbjct: 124 YLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG 183
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
K S+RS N+LLN LV+N H +++ + +VP+VF +I++ A CK V
Sbjct: 184 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI-RVGIVPDVFMVSIMVNAFCKDGKV 242
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A + +M ++G+ PN+VT+ +++ GYV GD+E AK V + ++G + TYT+L
Sbjct: 243 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302
Query: 262 MDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+ GY K ++ +A KV+ M E+ + P+E YGV+I+ +C+ K +A LLD+ML+
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+ +C +I+ C+ G++ +A + R++ N PD+ +T++ C+EG EA
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN----------- 428
L D+ + G P++LTYNTL+ G+C +A ++W M+++GV P+
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482
Query: 429 ------------------------VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
T+N +I G CK+G E I ++M D GC P+
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542
Query: 465 TSFSLLIEGLYESGNEGEVGKV 486
++ LI+G ++ N G+ KV
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKV 564
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 181/363 (49%), Gaps = 1/363 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++I Y G E A + + V R+V + L+ + + D + + +
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ +VP+ +LI C+ ++ A+R+LDEM +G+ NL +++ GY RG+I
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ V ++D PD+ +Y L+DGY + G ++A + D+M G+EP +TY +
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++ C+ +A + M++R P ++D L + E A LWK +L +
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+T+I LCK GK+ EA+++FD+ + G P +TY TLI G C+++ + +A +
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ M + + P++ YN LI G K E +L EM +G PN ++ LI+G
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623
Query: 476 ESG 478
+ G
Sbjct: 624 KEG 626
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 217/454 (47%), Gaps = 12/454 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ +F+ +N + A + + F+ + T++++I L + E
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTL--WKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527
Query: 99 SLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+ ++K ++ C + + T+I Y A A K +E+ + S+ N+L+
Sbjct: 528 EIFDKMK---DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L +++R V + + + PN+ T LI CK+ ++ A EM G+
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGIR-GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
N++ +T++ G G I+ A + ++D G+ PD + Y + ++ D+
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADS-- 701
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+DE + PN + Y + I CK K +AR + + +VP + C +I
Sbjct: 702 -LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYS 760
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
G V++A L +LR+ +P+ + +I+ LCK + A++LF + ++G P+++
Sbjct: 761 AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 820
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TYNTLI G C+ + A +L D M+E+G+ P+V TY+ LI G CK G+ + +++L +M
Sbjct: 821 TYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+ G + L++G SG ++ K+ M
Sbjct: 881 IKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDM 914
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 219/457 (47%), Gaps = 8/457 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L L+ + R D ALQI+H K + + Y +++ L + F+
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMK--RGVAPDEVGYSTLLDGLFKMENFEGAS 492
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+L ++ K F T+I G+ A + F +++ + TL++
Sbjct: 493 TLWKDILARGFTK-SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+ K + + + P++ N LI L K + +L EM G+ P
Sbjct: 552 YCKASNVGQA-FKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N+VT+ ++ G+ G ++ A + ++ + G + + ++ G +LGR+ +A +M
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M D+G P+ + + +K ++ LD+ + +P++ + I LC+
Sbjct: 671 QKMVDHGFFPDHECFLKSDIRYAAIQKIADS---LDESCKTFLLPNNIVYNIAIAGLCKT 727
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTY 397
GKV+DA + L K +PDN T+IH G + EA +L DE RG +P+++TY
Sbjct: 728 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTY 787
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N LI G+C+S + A RL+ + +KG+ PNV TYN LI G+CKIGN ++ ++M++
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G P+ ++S LI GL + G+ K+++ +G
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 206/474 (43%), Gaps = 82/474 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
Y +I R D LL E+ + + NLFI ++I Y G A
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLR---LGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
R+ +N++ S NTLL+ + ++ ++L M + + P V T N L+K
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG-----IEPTVLTYNTLLK 445
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC+ + A+++ M G+ P+ V ++T+L G + E A ++ DIL RG+
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA---- 309
T+ ++ G K+G++ +A ++ D+M+D G P+ +TY +I+ +CK G+A
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 565
Query: 310 -------------------------------RNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+LL +M R P+ +ID C+E
Sbjct: 566 GAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKE 625
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA------------------- 379
G ++ A + + + I ST++ L + G+I EA
Sbjct: 626 GMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF 685
Query: 380 ----------KKLFDEFERGS----IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+K+ D + +P+ + YN IAG+C++ ++ +A R + + KG
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
P+ FTY LI G+ GN E R+ +EML +G PN +++ LI GL +S N
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 169/352 (48%), Gaps = 16/352 (4%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELK---QNPEIKCGENLFITVIRNYGLAGRPE 131
S + + Y+S+I L ++R V LLTE+ P I + +I + G +
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT----YGALIDGWCKEGMLD 629
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN-- 189
A ++ + + + ++ +T+++ L + R D +L+ + K+V + F +
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ------KMVDHGFFPDHE 683
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+K+ + ++ LDE ++PN + + + G G +++A+R F + +
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+VPD TY L+ GY G + +A ++ DEM G+ PN VTY +I CK + A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+ L + Q+ P+ +ID C+ G ++ A +L +++ + P S +I+
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863
Query: 370 LCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDM 420
LCK G I + KL ++ + + S L+ Y TL+ G S E+ + +L+D M
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 164/371 (44%), Gaps = 25/371 (6%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I K N S ++ +L L N L F + + F+ PNV K+ CK
Sbjct: 59 ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFR--PNV-------KSYCKLV 109
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD--RGWVPDATT 257
+ R+ DE + + L + RG++ ++ +++ R + T
Sbjct: 110 HILSRGRMYDETRA------YLNQLVDLCKFKDRGNV-----IWDELVGVYREFAFSPTV 158
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ Y++ G +A+ V D M G P+ + ++ K ++ A + M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ VP + +++ C++GKV++A K++ P+ ++I+ G +
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEPNVFTYNML 435
AK + E+G +++TY LI G C+ ++ EA ++ M E+ + P+ Y +L
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV-GKVVSMATASG 494
I G+C+ G + +R+L+EML G N + LI G + G E G + M +
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398
Query: 495 SVESDSWNFLL 505
+S S+N LL
Sbjct: 399 KPDSYSYNTLL 409
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-------------------RKYVPSSALC 328
PN +Y ++ +G+ E R L+ ++ R++ S +
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVF 159
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
++ + E+G ++A ++ + + +P +++++ L K G+ A ++ + R
Sbjct: 160 DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR 219
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G +P + + ++ C+ ++ EA M GVEPN+ TY+ LI G+ +G+ +
Sbjct: 220 VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEA 279
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLL 505
+L+ M +KG N +++LLI+G + E KV+ ++ D ++ L+
Sbjct: 280 AKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLI 339
Query: 506 TRI--VSDLDSGAGALDELL 523
+D LDE+L
Sbjct: 340 DGYCRTGKIDDAVRLLDEML 359
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 238/463 (51%), Gaps = 6/463 (1%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
RL++ + Q + + ALQ+ + A +F+ + Y II KL A AFD +E L+ E++
Sbjct: 58 RLLTALREQADPEAALQMLNSALA-REDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMR 116
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFL-RIEKFNVQRSVRSLNTLLNALVQNKR 164
+ + G + + + +Y R + AV ++ F VQ N LLN L + R
Sbjct: 117 REGH-EAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSR 175
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
L+ ++ N + P+V T N LIKALC+ V A+ +L+EM S + P+ T T
Sbjct: 176 MKLLESVY-NEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T++ G++ G IE A RV +++ G P T VL++GY K+GR+ DA+ + + +
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G EP++VTY + C+ A ++D MLQ + P VI+ L + G++++A
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAG 403
+ +++ + C+PD +T+I LC + ++ EA L E +G P + T+N LI
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C+ + RL+++M G P+ TYN+LI C +G + +L+EM GC +
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
+++ +I+ L + E +V A G S + ++N L+
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 203/401 (50%), Gaps = 5/401 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T +++I L RA +L E+ + + E F T+++ + G E A++ +
Sbjct: 197 TLNTLIKALCRAHQVRTAVLMLEEMSSHA-VAPDETTFTTLMQGFIEEGSIEAALRVKTK 255
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + ++N L+N + R D + + K F+ P+ T N + LC+
Sbjct: 256 MMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE--PDQVTYNTFVHCLCQN 313
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A++V+D M G P++ T+ T++ G+++ AK + ++DRG +PD TT+
Sbjct: 314 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 373
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ RL +A+ + E+ G+ P+ T+ ++I A CK L ++M
Sbjct: 374 NTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS 433
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC GK+ +A +L K + C +TII LCK+ +I E
Sbjct: 434 SGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEE 493
Query: 379 AKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++FD+ + I S +T+NTLI G+C++ + +A L + MV++G++P+ TYN ++
Sbjct: 494 AEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILT 553
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CK G+ K+ ILE M G + ++ LI GL ++G
Sbjct: 554 HYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAG 594
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 167/331 (50%), Gaps = 2/331 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V + NT++N L +N D + N +P+ T N LI ALC ++ +E A+ +
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIV-NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLA 393
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
E+ G+ P++ T ++ GD R+F ++ G PD TY +L+D +
Sbjct: 394 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSM 453
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G+L +A+ ++ EME NG + VTY +I+A CK + EA + D M S+
Sbjct: 454 GKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTF 513
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
+ID LC+ +++DA EL ++++++ P N ++I+ CK+G + +A + +
Sbjct: 514 NTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTA 573
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G ++TY TLI G+C++ A +L M KG+ P YN +IQ + N ++
Sbjct: 574 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 633
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + EM + G P+ ++ ++ GL G
Sbjct: 634 ALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 185/410 (45%), Gaps = 19/410 (4%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+DL LQ H F TY+++I+ L++ D + ++ ++ P+
Sbjct: 323 MDLMLQEGHDPDVF---------TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 373
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
L + + L +LA + ++ + V + N L+NAL + L +F+
Sbjct: 374 NTLIVALCSQNRLEEALDLARELTVK----GLSPDVYTFNILINALCKVGDPHLGIRLFE 429
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ P+ T NILI LC + A+ +L EM S G + VT+ TI+ +
Sbjct: 430 EMKSS-GCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQ 488
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
IE A+ VF + G A T+ L+DG K R+ DA +++++M G++P+ +TY
Sbjct: 489 MRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITY 548
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ +CK +A ++L+ M + +I+ LC+ G+ + A +L + +
Sbjct: 549 NSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRI 608
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA-ELT 411
K P + +I L + + +A LF E E G P LTY + G+C +
Sbjct: 609 KGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIK 668
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
EA +MV KG P ++ ML +G +G I +E +++K F
Sbjct: 669 EAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKF 718
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 247/502 (49%), Gaps = 59/502 (11%)
Query: 42 LYPKRLVSMIFRQQNLD--LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
++ +V + R L+ +L F + K NF N +Y ++H L+R R +D +
Sbjct: 31 VFSDDIVDAVLRNLRLNPTASLGFFQFVSK-QQNFRPNVKSYCKLVHILSRGRMYDETRA 89
Query: 100 LLTELKQ------------------NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
L +L E +F +++ Y G + A+ F +
Sbjct: 90 YLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG 149
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
K S+RS N+LLN LV+N H +++ + +VP+VF +I++ A CK V
Sbjct: 150 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQ-QMIRVGIVPDVFMVSIMVNAFCKDGKV 208
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A + +M ++G+ PN+VT+ +++ GYV GD+E AK V + ++G + TYT+L
Sbjct: 209 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 268
Query: 262 MDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+ GY K ++ +A KV+ M E+ + P+E YGV+I+ +C+ K +A LLD+ML+
Sbjct: 269 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 328
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+ +C +I+ C+ G++ +A + R++ N PD+ +T++ C+EG EA
Sbjct: 329 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 388
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN----------- 428
L D+ + G P++LTYNTL+ G+C +A ++W M+++GV P+
Sbjct: 389 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448
Query: 429 ------------------------VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
T+N +I G CK+G E I ++M D GC P+
Sbjct: 449 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 508
Query: 465 TSFSLLIEGLYESGNEGEVGKV 486
++ LI+G ++ N G+ KV
Sbjct: 509 ITYRTLIDGYCKASNVGQAFKV 530
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 180/361 (49%), Gaps = 1/361 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++I Y G E A + + V R+V + L+ + + D + + + +
Sbjct: 232 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+VP+ +LI C+ ++ A+R+LDEM +G+ NL +++ GY RG+I
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ V ++D PD+ +Y L+DGY + G ++A + D+M G+EP +TY +++
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 411
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C+ +A + M++R P ++D L + E A LWK +L +
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 471
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+T+I LCK GK+ EA+++FD+ + G P +TY TLI G C+++ + +A ++
Sbjct: 472 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 531
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M + + P++ YN LI G K E +L EM +G PN ++ LI+G +
Sbjct: 532 GAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKE 591
Query: 478 G 478
G
Sbjct: 592 G 592
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 206/474 (43%), Gaps = 82/474 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
Y +I R D LL E+ + + NLFI ++I Y G A
Sbjct: 300 AYGVLIDGYCRTGKIDDAVRLLDEMLR---LGLKTNLFICNSLINGYCKRGEIHEAEGVI 356
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
R+ +N++ S NTLL+ + ++ ++L M + + P V T N L+K
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG-----IEPTVLTYNTLLK 411
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC+ + A+++ M G+ P+ V ++T+L G + E A ++ DIL RG+
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 471
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA---- 309
T+ ++ G K+G++ +A ++ D+M+D G P+ +TY +I+ +CK G+A
Sbjct: 472 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 531
Query: 310 -------------------------------RNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+LL +M R P+ +ID C+E
Sbjct: 532 GAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKE 591
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA------------------- 379
G ++ A + + + I ST++ L + G+I EA
Sbjct: 592 GMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF 651
Query: 380 ----------KKLFDEFERGS----IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+K+ D + +P+ + YN IAG+C++ ++ +A R + + KG
Sbjct: 652 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 711
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
P+ FTY LI G+ GN E R+ +EML +G PN +++ LI GL +S N
Sbjct: 712 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 179/385 (46%), Gaps = 34/385 (8%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+TLL+ L + + ++ ++K+ + + T N +I LCK + A + D+M
Sbjct: 442 STLLDGLFKMENFEGASTLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+G P+ +T+ T++ GY ++ A +V G + P Y L+ G K RL
Sbjct: 501 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 560
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+ ++ EM G+ PN VTYG +I+ +CK +A + +M + + +C ++
Sbjct: 561 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 620
Query: 333 DLLCEEGKVEDACELWKRL----------------------------LRKNC----MPDN 360
L G++++A L +++ L ++C +P+N
Sbjct: 621 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNN 680
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ + I LCK GK+ +A++ F +G +P TY TLI G + + EA RL D+
Sbjct: 681 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 740
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ +G+ PN+ TYN LI G CK N R+ ++ KG FPN +++ LI+G + GN
Sbjct: 741 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 800
Query: 480 EGEVGKVVSMATASGSVESDSWNFL 504
K+ G S N L
Sbjct: 801 MDAAFKLKDKMIEEGISPSIQCNLL 825
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELK---QNPEIKCGENLFITVIRNYGLAGRPE 131
S + + Y+S+I L ++R V LLTE+ P I + +I + G +
Sbjct: 540 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT----YGALIDGWCKEGMLD 595
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL-MFKNSRHKFKVVPNVFTCNI 190
A ++ + + + ++ +T+++ L + R D +L M K H F F
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---- 651
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+K+ + ++ LDE ++PN + + + G G +++A+R F + +G
Sbjct: 652 -LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 710
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+VPD TY L+ GY G + +A ++ DEM G+ PN VTY +I CK + A+
Sbjct: 711 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 770
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
L + Q+ P+ +ID C+ G ++ A +L +++ + P
Sbjct: 771 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 164/371 (44%), Gaps = 25/371 (6%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I K N S ++ +L L N L F + + F+ PNV K+ CK
Sbjct: 25 ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFR--PNV-------KSYCKLV 75
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD--RGWVPDATT 257
+ R+ DE + + L + RG++ ++ +++ R + T
Sbjct: 76 HILSRGRMYDETRA------YLNQLVDLCKFKDRGNV-----IWDELVGVYREFAFSPTV 124
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ Y++ G +A+ V D M G P+ + ++ K ++ A + M+
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ VP + +++ C++GKV++A K++ P+ ++I+ G +
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEPNVFTYNML 435
AK + E+G +++TY LI G C+ ++ EA ++ M E+ + P+ Y +L
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV-GKVVSMATASG 494
I G+C+ G + +R+L+EML G N + LI G + G E G + M +
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 364
Query: 495 SVESDSWNFLL 505
+S S+N LL
Sbjct: 365 KPDSYSYNTLL 375
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-------------------RKYVPSSALC 328
PN +Y ++ +G+ E R L+ ++ R++ S +
Sbjct: 66 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVF 125
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
++ + E+G ++A ++ + + +P +++++ L K G+ A ++ + R
Sbjct: 126 DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR 185
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G +P + + ++ C+ ++ EA M GVEPN+ TY+ LI G+ +G+ +
Sbjct: 186 VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEA 245
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLL 505
+L+ M +KG N +++LLI+G + E KV+ ++ D ++ L+
Sbjct: 246 AKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLI 305
Query: 506 TRI--VSDLDSGAGALDELL 523
+D LDE+L
Sbjct: 306 DGYCRTGKIDDAVRLLDEML 325
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 238/468 (50%), Gaps = 38/468 (8%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + ++I Q++ AL++F+ K F H TY S+I KL F+A+E +L
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRK-EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++++N E +++ ++NYG G+ + AV F R++ ++ + +V S N +++ LV
Sbjct: 64 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ +D H ++ R + + P+V++ I +K+ CK A+R+L+ M S G N+V
Sbjct: 124 SGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 182
Query: 222 THTTILGGYVW-----------------------------------RGDIENAKRVFGDI 246
+ T++GG+ +GD++ +++ +
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG +P+ TY + + G + G L AV+++ + + G +P+ +TY +I CK K
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA L M+ P S +I C+ G V+ A + + +PD ++
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I LC EG+ A LF+E +G P+++ YNTLI G+ + EA +L ++M EKG+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
P V T+N+L+ G CK+G + +++ M+ KG FP+ +F++LI G
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 225/454 (49%), Gaps = 20/454 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y++I+ L + FD + ++ P++ F ++++ RP A++
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYS----FTIRMKSFCKTSRPHAALRL 168
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + +V + T++ + + Y+L M + V + T N L+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG-----VSLCLSTFNKLL 223
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ LCKK DV+ ++LD++ G++PNL T+ + G RG+++ A R+ G ++++G
Sbjct: 224 RVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPK 283
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L+ G K + +A + +M + G+EP+ TY +I +CKG A +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ D + +VP +ID LC EG+ A L+ L K P+ + +T+I L
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+G I EA +L +E E+G IP + T+N L+ G+C+ +++A L M+ KG P++FT
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+N+LI G+ + + IL+ MLD G P+ +++ L+ GL ++ +V +
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 492 ASGSVES-DSWNFLLTRIV--SDLDSGAGALDEL 522
G + ++N LL + LD G L+E+
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 216/454 (47%), Gaps = 13/454 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I+ L + F E L ++ N ++ + T+I Y G +LA + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKM-VNEGLEPDSYTYNTLIAGYCKGGMVQLA-ERIVG 345
Query: 140 IEKFNV----QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
FN Q + RSL ++ L + +F + K + PNV N LIK L
Sbjct: 346 DAVFNGFVPDQFTYRSL---IDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGL 401
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
+ + A ++ +EM G++P + T ++ G G + +A + ++ +G+ PD
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+ +L+ GY ++ +A++++D M DNGV+P+ TY ++ CK K +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+++ P+ +++ LC K+++A L + + K+ PD T+I CK G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 376 IWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ A LF + E S TYN +I E +T A +L+ +MV++ + P+ +TY
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+++ GFCK GN G + L EM++ G P+ T+ +I L E ++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 494 GSVESDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
G V ++ N + ++ + L++LL K+C
Sbjct: 702 GLV-PEAVNTICDVDKKEVAAPKLVLEDLLKKSC 734
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 249/512 (48%), Gaps = 48/512 (9%)
Query: 62 QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
++F A K +F T S+I A + FD+VE LL+ ++ + E FI V
Sbjct: 62 KMFKSAPKMG-SFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII-ERSFIVVF 119
Query: 122 RNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDL---VHLMFKNSRH 177
R YG A P+ AV F R +++F +RSV+S N++LN ++ Y + NS
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM 179
Query: 178 KFKVVPNVFTCNILIKALCK-----------------------------------KDDVE 202
+ PN + N++IKALCK ++ ++
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+ +LDEM S G P+ V + ++ G +GD+ ++ ++ +G VP+ TY L+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
G G+L AV +++ M + PN+VTYG +I K +++ +A LL M +R Y
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+ + +I L +EGK E+A LW+++ K C P+ + S ++ LC+EGK EAK++
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ G +P+ TY++L+ G ++ EA ++W +M + G N F Y++LI G C
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-- 499
+G KE + + +ML G P+ ++S +I+GL G+ K+ +S
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 500 --SWNFLLTRIV--SDLDSGAGALDELLVKNC 527
++N LL + D+ L+ +L + C
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 209/435 (48%), Gaps = 14/435 (3%)
Query: 60 ALQIFHYA--GKFHPNFSHNYDTYHSIIHKLARARAFD-AVESLLTELKQNPEIKCGENL 116
L+ + Y + N S N +++ +I L + R D A+E + PE KC +
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF----RGMPERKCLPDG 222
Query: 117 FITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ GL R + AV ++ S N L++ L + V + N
Sbjct: 223 YTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN 282
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
K VPN T N LI LC K ++ A+ +L+ M S +PN VT+ T++ G V +
Sbjct: 283 MFLK-GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR 341
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+A R+ + +RG+ + Y+VL+ G K G+ +A+ + +M + G +PN V Y
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
V+++ C+ K EA+ +L+ M+ +P++ ++ + G E+A ++WK + +
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEA 413
C + S +I LC G++ EA ++ + G P + Y+++I G+C + A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 414 GRLWDDMV---EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+L+ +M+ E +P+V TYN+L+ G C + + +L MLD+GC P+ + +
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 471 IEGLYESGNEGEVGK 485
+ L E N + G+
Sbjct: 582 LNTLSEKSNSCDKGR 596
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 166/370 (44%), Gaps = 22/370 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY+++IH L D SLL + + KC N + T+I R AV
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSS---KCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ +E+ + + L++ L + + + +++ K PN+ ++L+
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLVDG 406
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LC++ A +L+ M + G +PN T+++++ G+ G E A +V+ ++ G +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y+VL+DG +GR+ +A+ V +M G++P+ V Y +I+ C A L
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 315 DML---QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ML + K P ++D LC + + A +L +L + C PD +T ++ L
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++ + + F E L+ + + ++ A + + M+ K + P T
Sbjct: 587 EKSNSCDKGRSFLE-------------ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTST 633
Query: 432 YNMLIQGFCK 441
+ M+++ CK
Sbjct: 634 WAMIVREICK 643
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 151/329 (45%), Gaps = 36/329 (10%)
Query: 80 TYHSIIHKLARAR-AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY ++I+ L + R A DAV LL+ +++ ++++ +I G+ E A+ +
Sbjct: 329 TYGTLINGLVKQRRATDAVR-LLSSMEERG-YHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 139 RIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
++ + + ++ + L++ L + N+ ++++ M + +PN +T + L+K
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG-----CLPNAYTYSSLMKG 441
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
K E A++V EM G N ++ ++ G G ++ A V+ +L G PD
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEM---EDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
Y+ ++ G +G + A+K+ EM E+ +P+ VTY ++++ C K A +
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561
Query: 312 LLDDMLQRKYVPSSALCCKVIDLL------CEEGK---------------VEDACELWKR 350
LL+ ML R P C ++ L C++G+ V AC + +
Sbjct: 562 LLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEV 621
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+L K P + + I+ +CK KI A
Sbjct: 622 MLGKYLAPKTSTWAMIVREICKPKKINAA 650
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 233/449 (51%), Gaps = 12/449 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
W +++ P ++ ++ +++L A IF A + N F H++ T+ +I KL A F
Sbjct: 9 WSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRP 68
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E +L +K+ + + E +F+++ R YG P A++ F ++ F + + +S ++
Sbjct: 69 AEEMLNRMKEE-KCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVF 127
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPSMG 215
LV+ + + +K R + V +V + N+LIKALCK ++ A + EMP G
Sbjct: 128 AILVEENQLKVAMSFYKYMR-EMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRG 186
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P+ T+ T++ G G AK +F ++ +G P TY+ LM G + G + +A+
Sbjct: 187 CDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAM 246
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ D+M+ +EPN TY +++ CK S EA LL+ M+++++ P+ +I+ L
Sbjct: 247 GLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGL 306
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C+EGK+ +A E R+ + PD + II+ C K EA DE G I P+
Sbjct: 307 CKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNR 366
Query: 395 LTY-------NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+T+ N ++ G+C + L + +L+ M +G+ + T++ L++ FCK G+ +
Sbjct: 367 VTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHK 426
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
RI +EM+ GC P+ +S ++ G ++
Sbjct: 427 AARIFDEMVLDGCVPDHGIWSAVVGGFWD 455
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 125/222 (56%), Gaps = 2/222 (0%)
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY ++ DA++V +M D G +P + +Y + + + A + M +
Sbjct: 94 GYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQ 153
Query: 324 SSALCCKVIDLLCE-EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
S +I LC+ G ++ A E+++ + ++ C PD+ T+I+ LCK GK +EAK+L
Sbjct: 154 SVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKEL 213
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F E + +G PS++TY+ L+ G+C++ + EA L+D M +K +EPNVFTY+ L+ G CK
Sbjct: 214 FKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCK 273
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G + E + +LE M+ K PN ++S LI GL + G E
Sbjct: 274 NGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEA 315
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 137/345 (39%), Gaps = 51/345 (14%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELK 105
+ +++ + L +A+ + Y + + + + +I L + + DA + E+
Sbjct: 126 VFAILVEENQLKVAMSFYKYMREM--GVRQSVVSLNVLIKALCKNSGTIDAAFEIFREM- 182
Query: 106 QNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P+ C + + T+I G+ A + F ++ SV + + L++ L Q
Sbjct: 183 --PKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAG 240
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D +F + K + PNVFT + L+ LCK A+ +L+ M PN+VT+
Sbjct: 241 NVDEAMGLFDKMKKK-AIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTY 299
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+T++ G G + A + +G PDA Y +++G+ + + +A +DEM
Sbjct: 300 STLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVL 359
Query: 284 NGVEPNEVTYGV------------------------------------------MIEAFC 301
+ PN VT+ + +++ FC
Sbjct: 360 GQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFC 419
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
K +A + D+M+ VP + V+ + KV +A E
Sbjct: 420 KKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFE 464
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 239/444 (53%), Gaps = 13/444 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
W + + P +++ ++ +++++ ++ +F A + N + H+ ++ ++ +L A F A
Sbjct: 10 WSKNITPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKA 69
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E ++ +K + E++ +++ R YG RP +++ F +++ F+ S ++ T+L
Sbjct: 70 AEDIVARMKIENCV-VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVL 128
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPSMG 215
LV+ + +L +KN R + + P V + N+LIKALC+ D V+ +++ EMP G
Sbjct: 129 AILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRG 187
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P+ T+ T++ G G I+ AK++F +++++ P TYT L++G + +A+
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ ++EM+ G+EPN TY +++ CK +S +A L + M+ R P+ +I L
Sbjct: 248 RYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C+E K+++A EL R+ + PD + +I C K EA DE G I P+
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNR 367
Query: 395 LTYNT-------LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
LT+N ++ G+C + + A L+ M +G+ V T + L++ CK G ++
Sbjct: 368 LTWNIHVKTSNEVVRGLCTNYP-SRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQK 426
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+++++E++ GC PNK ++ LLI
Sbjct: 427 AVQLVDEIVTDGCIPNKGTWKLLI 450
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 149/332 (44%), Gaps = 52/332 (15%)
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+MFK S++ T + +IK + + DVE +I V D + N H G
Sbjct: 6 MMFKWSKN--------ITPSQVIKLMRAEKDVEKSIAVFDS--ATAEYANGYLHDQSSFG 55
Query: 230 Y-VWRGDIENAKRVFGDILDRGWVPD-ATTYTVLMD---GYIKLGRLTDAVKVMDEMEDN 284
Y V R N + DI+ R + + + +L+ GY ++ R D+++V +M+D
Sbjct: 56 YMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+P+ Q+ YV V+ +L EE ++ A
Sbjct: 116 DCDPS----------------------------QKAYVT-------VLAILVEENQLNLA 140
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCK-EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+ +K + P A + +I LC+ +G + K+F E +RG P TY TLI+
Sbjct: 141 FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLIS 200
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C + EA +L+ +MVEK P V TY LI G C N E +R +EEM KG P
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEP 260
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
N ++S L++GL + G + ++ M A G
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 121/309 (39%), Gaps = 58/309 (18%)
Query: 56 NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
+D L+IFH K + +Y TY ++I L R D + L TE+ E C
Sbjct: 172 TVDAGLKIFHEMPKRGCD-PDSY-TYGTLISGLCRFGRIDEAKKLFTEM---VEKDCAPT 226
Query: 116 LFITVIRNYGLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVH 169
+ GL G + A++ ++ ++ +V + ++L++ L ++ R +L
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+M PN+ T LI LCK+ ++ A+ +LD M G+ P+ + ++ G
Sbjct: 287 MMMARGCR-----PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTV----------------------------- 260
+ A +++ G P+ T+ +
Sbjct: 342 FCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRS 401
Query: 261 ------------LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
L+ K G AV+++DE+ +G PN+ T+ ++I GE
Sbjct: 402 RGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGE 461
Query: 309 ARN-LLDDM 316
A + LL D+
Sbjct: 462 ASDSLLRDL 470
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 246/502 (49%), Gaps = 59/502 (11%)
Query: 42 LYPKRLVSMIFRQQNLD--LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
++ +V + R L+ +L F + K NF N +Y ++H L+R R +D +
Sbjct: 65 VFSDDIVDAVLRNLRLNPTASLGFFQFVSK-QQNFRPNVKSYCKLVHILSRGRMYDETRA 123
Query: 100 LLTELKQ------------------NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
L +L E +F +++ Y G + A+ F +
Sbjct: 124 YLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG 183
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
K S+RS N+LLN LV+N H +++ + +VP+VF +I++ A CK V
Sbjct: 184 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQ-QMIRVGIVPDVFMVSIMVNAFCKDGKV 242
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A + +M ++G+ PN+VT+ +++ GYV GD+E AK V + ++G + TYT+L
Sbjct: 243 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302
Query: 262 MDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+ GY K ++ +A KV+ M E+ + P+E YGV+I+ +C+ K +A LLD+ML+
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+ +C +I+ C+ G++ +A + R++ N PD+ +T++ C+EG EA
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN----------- 428
L D+ + G P++LTYNTL+ G+C +A ++W M++ GV P+
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482
Query: 429 ------------------------VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
T+N +I G CK+G E I ++M D GC P+
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542
Query: 465 TSFSLLIEGLYESGNEGEVGKV 486
++ LI+G ++ N G+ KV
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKV 564
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 218/454 (48%), Gaps = 20/454 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ +F+ +N + A + + F+ + T++++I L + E
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTL--WKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527
Query: 99 SLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+ ++K ++ C + + T+I Y A A K +E+ + S+ N+L+
Sbjct: 528 EIFDKMK---DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584
Query: 157 NALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+ L +++R DL+ M + PN+ T LI CK+ ++ A EM
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGIRG-----LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G+ N++ +T++ G G I+ A + ++D G+ PD + Y + ++
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
D+ +DE + PN + Y + I CK K +AR + + +VP + C +I
Sbjct: 700 DS---LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 756
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
G V++A L +LR+ +P+ + +I+ LCK + A++LF + ++G
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 816
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++TYNTLI G C+ + A +L D M+E+G+ P+V TY+ LI G CK G+ + +++
Sbjct: 817 PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKL 876
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
L +M+ G + L++G +++ N E+ K
Sbjct: 877 LNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSK 910
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 1/363 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++I Y G E A + + V R+V + L+ + + D + + +
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ +VP+ +LI C+ ++ A+R+LDEM +G+ NL +++ GY RG+I
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ V ++D PD+ +Y L+DGY + G ++A + D+M G+EP +TY +
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++ C+ +A + M++ P ++D L + E A LWK +L +
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+T+I LCK GK+ EA+++FD+ + G P +TY TLI G C+++ + +A +
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ M + + P++ YN LI G K E +L EM +G PN ++ LI+G
Sbjct: 564 VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623
Query: 476 ESG 478
+ G
Sbjct: 624 KEG 626
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 219/457 (47%), Gaps = 8/457 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L L+ + R D ALQI+H K + + Y +++ L + F+
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMK--XGVAPDEVGYSTLLDGLFKMENFEGAS 492
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+L ++ K F T+I G+ A + F +++ + TL++
Sbjct: 493 TLWKDILARGFTK-SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+ K + + + P++ N LI L K + +L EM G+ P
Sbjct: 552 YCKASNVGQA-FKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP 610
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N+VT+ ++ G+ G ++ A + ++ + G + + ++ G +LGR+ +A +M
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M D+G P+ + + +K ++ LD+ + +P++ + I LC+
Sbjct: 671 QKMVDHGFFPDHECFLKSDIRYAAIQKIADS---LDESCKTFLLPNNIVYNIAIAGLCKT 727
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTY 397
GKV+DA + L K +PDN T+IH G + EA +L DE RG +P+++TY
Sbjct: 728 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTY 787
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N LI G+C+S + A RL+ + +KG+ PNV TYN LI G+CKIGN ++ ++M++
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G P+ ++S LI GL + G+ K+++ +G
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 206/474 (43%), Gaps = 82/474 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
Y +I R D LL E+ + + NLFI ++I Y G A
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLR---LGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
R+ +N++ S NTLL+ + ++ ++L M + + P V T N L+K
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG-----IEPTVLTYNTLLK 445
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC+ + A+++ M G+ P+ V ++T+L G + E A ++ DIL RG+
Sbjct: 446 GLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA---- 309
T+ ++ G K+G++ +A ++ D+M+D G P+ +TY +I+ +CK G+A
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK 565
Query: 310 -------------------------------RNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+LL +M R P+ +ID C+E
Sbjct: 566 GAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKE 625
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA------------------- 379
G ++ A + + + I ST++ L + G+I EA
Sbjct: 626 GMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF 685
Query: 380 ----------KKLFDEFERGS----IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+K+ D + +P+ + YN IAG+C++ ++ +A R + + KG
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
P+ FTY LI G+ GN E R+ +EML +G PN +++ LI GL +S N
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 164/371 (44%), Gaps = 25/371 (6%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I K N S ++ +L L N L F + + F+ PNV K+ CK
Sbjct: 59 ISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFR--PNV-------KSYCKLV 109
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD--RGWVPDATT 257
+ R+ DE + + L + RG++ ++ +++ R + T
Sbjct: 110 HILSRGRMYDETRAY------LNQLVDLCKFKDRGNV-----IWDELVGVYREFAFSPTV 158
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ Y++ G +A+ V D M G P+ + ++ K ++ A + M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ VP + +++ C++GKV++A K++ P+ ++I+ G +
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEPNVFTYNML 435
AK + E+G +++TY LI G C+ ++ EA ++ M E+ + P+ Y +L
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV-GKVVSMATASG 494
I G+C+ G + +R+L+EML G N + LI G + G E G + M +
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398
Query: 495 SVESDSWNFLL 505
+S S+N LL
Sbjct: 399 KPDSYSYNTLL 409
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 115/260 (44%), Gaps = 24/260 (9%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-------------------RKYVPSSALC 328
PN +Y ++ +G+ E R L+ ++ R++ S +
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVF 159
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
++ + E+G ++A ++ + + +P +++++ L K G+ A ++ + R
Sbjct: 160 DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR 219
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G +P + + ++ C+ ++ EA M GVEPN+ TY+ LI G+ +G+ +
Sbjct: 220 VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEA 279
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLL 505
+L+ M +KG N +++LLI+G + E KV+ ++ D ++ L+
Sbjct: 280 AKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLI 339
Query: 506 TRI--VSDLDSGAGALDELL 523
+D LDE+L
Sbjct: 340 DGYCRTGKIDDAVRLLDEML 359
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 241/464 (51%), Gaps = 17/464 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
W +++ ++ +I ++++ A+ IF A + N F H++ T+ +I +L A F
Sbjct: 9 WSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRL 68
Query: 97 VESLLTELKQNPEIKCG--ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E LL +K+ KC E++F+++ R YG +P AV+ F +++++ + S +S T
Sbjct: 69 AEELLCRMKEE---KCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYIT 125
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPS 213
+ LV + L L F + + P+V + N+LIKALCK ++ A+R+ EMP+
Sbjct: 126 VFAILVGENQLKLA-LRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPN 184
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P+ T+ T++ G G I AK +F ++ + P TYT L+ G + L
Sbjct: 185 RGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDS 244
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++EM G++PN TY +++ CK S A LLD M+ R+++P+ ++
Sbjct: 245 AIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVH 304
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
LC+EGK+++A E+ R+ + PD + II C K EA DE G I P
Sbjct: 305 GLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISP 364
Query: 393 SLLT-------YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ LT +N ++ G+C + A +L+ M +G+ + T++ L+ FC G+
Sbjct: 365 NRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDL 423
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+ +++EM+ GC P++ +++ ++ ++ E ++V +
Sbjct: 424 HKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQV 467
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 127/233 (54%), Gaps = 2/233 (0%)
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
Y ++ + DAV+V +M++ EP++ +Y + + A M + P
Sbjct: 94 AYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPP 153
Query: 324 SSALCCKVIDLLCE-EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
S A +I LC+ G ++ A +++ + + C PD+ T+I+ LC+ GKI EAK+L
Sbjct: 154 SVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKEL 213
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F E E + P+++TY +LI G+C+S +L A RL ++M KG++PNVFTY+ L+ G CK
Sbjct: 214 FKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCK 273
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G + + +L+ M+ + PN ++S L+ GL + G E +++ G
Sbjct: 274 SGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQG 326
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 238/444 (53%), Gaps = 13/444 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
W + + P +++ ++ +++++ ++ +F A + N + H+ ++ ++ +L A F A
Sbjct: 10 WSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKA 69
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E L+ +K + E++ +++ R YG RP +++ F +++ F+ S ++ T+L
Sbjct: 70 AEDLIVRMKIENCV-VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVL 128
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPSMG 215
LV+ + +L +KN R + + P V + N+LIKALC+ D V+ +++ EMP G
Sbjct: 129 AILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 187
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P+ T+ T++ G G I+ AK++F +++++ P TYT L++G + +A+
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ ++EM+ G+EPN TY +++ CK +S +A L + M+ R P+ +I L
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C+E K+++A EL R+ + PD + +I C K EA DE G I P+
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Query: 395 LTYNT-------LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
LT+N ++ G+C + + A L+ M +G+ V T L++ CK G ++
Sbjct: 368 LTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQK 426
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+++++E++ GC P+K ++ LLI
Sbjct: 427 AVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 17/312 (5%)
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+MFK S++ T + +IK + + DVE ++ V D + N H G
Sbjct: 6 MMFKWSKN--------ITPSQVIKLMRAEKDVEKSMAVFDS--ATAEYANGYVHDQSSFG 55
Query: 230 Y-VWRGDIENAKRVFGDILDRGWVPD-ATTYTVLMD---GYIKLGRLTDAVKVMDEMEDN 284
Y V R N + D++ R + + + +L+ GY ++ R D+++V +M+D
Sbjct: 56 YMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE-EGKVED 343
+P++ Y ++ + + A +M + P+ A +I LC +G V+
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+++ + ++ C PD+ T+I LC+ G+I EAKKLF E E+ P+++TY +LI
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 235
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C S + EA R ++M KG+EPNVFTY+ L+ G CK G + + + + E M+ +GC P
Sbjct: 236 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 463 NKTSFSLLIEGL 474
N +++ LI GL
Sbjct: 296 NMVTYTTLITGL 307
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 11/335 (3%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
++RV +M P+ + T+L V + A + + ++ + G P + VL+
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 264 GYIKLGRLTDA-VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ DA +K+ EM G +P+ TYG +I C+ + EA+ L +M+++
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ +I+ LC V++A + + K P+ S+++ LCK+G+ +A +L
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F+ RG P+++TY TLI G+C+ ++ EA L D M +G++P+ Y +I GFC
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSL-------LIEGLYESGNEGEVGKVVSMATASG 494
I +E L+EM+ G PN+ ++++ ++ GL + +SM +
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGI 404
Query: 495 SVESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
SVE ++ L+ + + +DE++ C
Sbjct: 405 SVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGC 439
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 212/387 (54%), Gaps = 3/387 (0%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+LF T+I + R + A+ F ++EK V +V + N +++ L ++ R D + FK
Sbjct: 257 HLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAY-RFKE 315
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
K KV P++ T ++ I L K + ++ A VL EM +G VPN V + T++ GY G
Sbjct: 316 KMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMG 375
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+I A ++ D+L +G P++ T L+ G+ K ++ A V++EM G+ N+ ++
Sbjct: 376 NISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFS 435
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I C + A + + +ML R P+ L ++ LC+ GK +A ELW RLL K
Sbjct: 436 MVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK 495
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEA 413
+P+ S+ +IH LCK G + E KL D ERG + +TYNTLI+G C+ ++ E
Sbjct: 496 GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEG 555
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L ++MV+KG++P+++T+N+L+ G C E R+ E G PN ++ ++I+G
Sbjct: 556 FELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDG 615
Query: 474 LYESGNEGEVGKVVSMATASGSVESDS 500
Y N+ E G+ + S +E +S
Sbjct: 616 -YCKANKVEEGENLLNELVSKKLELNS 641
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 236/490 (48%), Gaps = 11/490 (2%)
Query: 16 LQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
L+ I A C L ++ + P + L+ + N+ AL+I S
Sbjct: 339 LEKIDEANCVLKEMS---ELGFVPNEVVYNTLIDGYCKMGNISEALKI--RDDMLSKGIS 393
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N T +S+I ++ E++L E+ + + F VI L R A+
Sbjct: 394 PNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG-LPINQGSFSMVINWLCLKFRFVTALH 452
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ N++ + L TL++ L + K+ + V L + F VPN+ T N LI
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGF--VPNIVTSNALIHG 510
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK +++ +++L +M G+V + +T+ T++ G G ++ + +++ +G PD
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+ +L+ G ++ +A ++ E + NG PN TYGVMI+ +CK K E NLL+
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+++ +K +S + +I C G + A L + + + A S+++H LC G
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIG 690
Query: 375 KIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ +AK L DE + G +P+++ Y T+I G + ++ + + +M + PN FTY
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYT 750
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
++I GFCK+G KE ++L EM +KG P+ +++ GL + G E KV +S
Sbjct: 751 IMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCD-EMSS 809
Query: 494 GSVESDSWNF 503
G+V D +
Sbjct: 810 GAVCLDEITY 819
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 197/405 (48%), Gaps = 45/405 (11%)
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFT 187
A F + K + S+++ LL++LV+ K Y++ + ++P+V
Sbjct: 204 FAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGG-----IIPDVHL 258
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ +I A CK + AI + +M +G+ PN+VT+ I+ G G ++ A R ++
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMV 318
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
P TY+V ++G IKL ++ +A V+ EM + G PNEV Y +I+ +CK
Sbjct: 319 KEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNIS 378
Query: 308 EARNLLDDMLQRKYVPSSALC-------CK----------------------------VI 332
EA + DDML + P+S CK VI
Sbjct: 379 EALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVI 438
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSI 391
+ LC + + A + +L +N P++ + +T++ LCK GK EA +L+ +G +
Sbjct: 439 NWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFV 498
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++T N LI G+C++ + E +L DM+E+G+ + TYN LI G CK G KEG +
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFEL 558
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
EEM+ KG P+ +F+LL+ GL + E ++ +G V
Sbjct: 559 KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV 603
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 37/288 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ ++H L A D L E C +N ++ + YG+
Sbjct: 573 TFNLLLHGLCNADKIDEASRLWHE--------CKKNGYVPNVYTYGVM------------ 612
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I+ + V LLN LV +K+ +L +++ N LI+A C
Sbjct: 613 IDGYCKANKVEEGENLLNELV-SKKLELNSVVY----------------NSLIRAYCING 655
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A R+ D+M S G++ + T+++++ G G +++AK + ++ G +P+ YT
Sbjct: 656 NMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYT 715
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ GY KLG++ V+ EM + + PN+ TY +MI+ FCK K+ EA LL++M ++
Sbjct: 716 TIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEK 775
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+P + + LC+EGKVE+A ++ + D +T+I
Sbjct: 776 GILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 100/181 (55%), Gaps = 1/181 (0%)
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
G A ++ + ++ PS C ++ L + +++ + E++ + +PD + ST+
Sbjct: 203 GFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTM 262
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ CK + +A LF + E+ G P+++TYN +I G+C+S L EA R + MV++ V
Sbjct: 263 INAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV 322
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P++ TY++ I G K+ E +L+EM + G PN+ ++ LI+G + GN E K
Sbjct: 323 SPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALK 382
Query: 486 V 486
+
Sbjct: 383 I 383
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 4/243 (1%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
+D A +++H K + N TY +I +A + E+LL EL + +++ +
Sbjct: 587 IDEASRLWHECKK--NGYVPNVYTYGVMIDGYCKANKVEEGENLLNEL-VSKKLELNSVV 643
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++IR Y + G A + ++ V S + ++L++ L D + R
Sbjct: 644 YNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR 703
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K ++PNV +I K + VL EM S + PN T+T ++ G+ G
Sbjct: 704 -KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKT 762
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A ++ ++ ++G +PDA TY +G K G++ +A KV DEM V +E+TY +
Sbjct: 763 KEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTL 822
Query: 297 IEA 299
I+
Sbjct: 823 IDG 825
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 223/402 (55%), Gaps = 7/402 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
+Y ++I+ L + D ++ ++ Q C N+ + T++ + G + AV+
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQR---GCQPNVITYGTLVDGFCRVGDLDGAVELV 172
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + + + + N +++ L ++ D +FK P+VFT + ++ +L K
Sbjct: 173 RKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVK 232
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V+ A R+++ M S G PN+VT++++L G G ++ A + + G P+ T
Sbjct: 233 SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 292
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++DG+ KLGR+ +A +++EM D G +PN VTY V+++AFCK K+ +A L++ M+
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
++ YVP+ ++D+ C++ +VE AC+L +++K C+P+ +T+I LCK K+
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E L ++ +P ++T+NT+I MC++ + A L++ + E G PN+ TYN L+
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472
Query: 437 QGFCKIGNAKEGIRILEEMLDK-GCFPNKTSFSLLIEGLYES 477
G CK + +L EM K GC P+ +++ +I+GL +S
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 514
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 202/385 (52%), Gaps = 40/385 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N +I L K D ++ AIR+L+EM G PN+ ++ T+L G+ +ENA +
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ RG PD +YT +++G KL ++ +A +VMD+M G +PN +TYG +++ FC+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161
Query: 303 GKKSGEARNLLDDMLQRKYVPSS--------ALC-------------------------- 328
A L+ M +R Y P++ LC
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221
Query: 329 --CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
++D L + GKV+DAC L + ++ K C P+ S+++H LCK GK+ EA L
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Query: 387 ER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
R G P+++TYNT+I G C+ + EA L ++MV+ G +PNV TY +L+ FCK G A
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFL 504
++ I ++E M++KG PN +++ L++ + +++S G V + S+N +
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401
Query: 505 LTRI--VSDLDSGAGALDELLVKNC 527
+ + + + G L+++L NC
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNC 426
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 242/507 (47%), Gaps = 45/507 (8%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + LV R +LD A+++ + + N TY++I+H L R D+
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTE--RGYRPNAITYNNIMHGLCSGRKLDSAL 204
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L E++++ C ++F T++ + +G+ + A + + +V + ++LL
Sbjct: 205 QLFKEMEESGS--CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L + + D + + + PN+ T N +I CK ++ A +L+EM G
Sbjct: 263 HGLCKAGKLDEATALLQR-MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 321
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+VT+T +L + G E+A + ++++G+VP+ TY L+D + K + A +
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
++ M G PN V+Y +I CK K E LL+ ML VP +ID +C
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSL 394
+ +V+ A EL+ + C P+ ++++H LCK + +A+ L E R G P +
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501
Query: 395 LTYNTLIAGMCESAELTEAGRLW----------DD------------------------- 419
+TYNT+I G+C+S + A +L+ DD
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 561
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M++ G +P TY LI GFCK GN + + IL+ +L KG +P+ +FS+ I+ L + G
Sbjct: 562 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 621
Query: 480 EGEVGKVVSMATASGSV-ESDSWNFLL 505
+ G+++ +G V ++ ++N LL
Sbjct: 622 LRQAGELLETMLRAGLVPDTVTYNTLL 648
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 205/411 (49%), Gaps = 16/411 (3%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPEL 132
S N TY S++H L +A D +LL + ++ C N+ + T+I + GR +
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS---GCSPNIVTYNTIIDGHCKLGRIDE 308
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTC 188
A + Q +V + LL+A + + + LV +M + VPN+FT
Sbjct: 309 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG-----YVPNLFTY 363
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N L+ CKKD+VE A ++L M G VPN+V++ T++ G + + +L
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
VPD T+ ++D K R+ A ++ + ++++G PN VTY ++ CK ++ +
Sbjct: 424 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 483
Query: 309 ARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL +M +++ P VID LC+ +V+ A +L+ ++L PD+ S +I
Sbjct: 484 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 543
Query: 368 HWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK + EA + + + G P +TY TLI G C++ L +A + ++ KG
Sbjct: 544 SSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSY 603
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
P+V T+++ I K G ++ +LE ML G P+ +++ L++G ++
Sbjct: 604 PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 654
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 167/364 (45%), Gaps = 43/364 (11%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY+S++ + + LL+ + Q C N+ + TVI A + V
Sbjct: 359 NLFTYNSLLDMFCKKDEVERACQLLSSMIQK---GCVPNVVSYNTVIAGLCKATKVHEGV 415
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
++ N + + NT+++A+ + R D+ + +F N + PN+ T N L+
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF-NLIQESGCTPNLVTYNSLVHG 474
Query: 195 LCKKDDVEGAIRVLDEMP-SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK + A +L EM G P+++T+ T++ G ++ A ++F +L G P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY++++ K + +A V++ M NG +P +TYG +I+ FCK
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK----------- 583
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
G ++ A E+ + LL K PD S I WL K
Sbjct: 584 ------------------------TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 619
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ +A +L + R G +P +TYNTL+ G C+++ +A L++ M + G EP+ TY
Sbjct: 620 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATY 679
Query: 433 NMLI 436
L+
Sbjct: 680 TTLV 683
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 163/336 (48%), Gaps = 11/336 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L+ M ++ ++ A Q+ + N +Y+++I L +A
Sbjct: 358 PNLFTYNSLLDMFCKKDEVERACQLL--SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL ++ N P+I + + + Y R ++A + F I++ ++ + N+L
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTY----RVDIAYELFNLIQESGCTPNLVTYNSL 471
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ L +++R+D + + K P++ T N +I LCK V+ A ++ +M S G
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531
Query: 216 MVPNLVTHTTILGGYV-WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
+ P+ VT++ ++ WR ++ A V +L G+ P A TY L+DG+ K G L A
Sbjct: 532 LAPDDVTYSIVISSLCKWRF-MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 590
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++++ + G P+ VT+ + I+ K + +A LL+ ML+ VP + ++
Sbjct: 591 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 650
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
C+ + EDA +L++ + + C PDNA +T++ L
Sbjct: 651 FCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 5/192 (2%)
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
LC+ G+ DA L R + K C PD+ +T+I+ L K ++ +A +L +E + G P+
Sbjct: 20 LCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPN 78
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+ +YNT++ G C++ + A L + MV +G P+V +Y +I G CK+ E R+++
Sbjct: 79 VFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMD 138
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVS-- 510
+M+ +GC PN ++ L++G G+ +G V V M + ++N ++ + S
Sbjct: 139 KMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGR 198
Query: 511 DLDSGAGALDEL 522
LDS E+
Sbjct: 199 KLDSALQLFKEM 210
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%)
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTE 412
RK + +I+ LC G+ +A F E + P +TYNT+I G+ +S L +
Sbjct: 3 RKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDD 62
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A RL ++MV+ G PNVF+YN ++ GFCK + + +LE+M+ +GC P+ S++ +I
Sbjct: 63 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVIN 122
Query: 473 GLYESGNEGEVGKVVSMATASG 494
GL + E +V+ G
Sbjct: 123 GLCKLDQVDEACRVMDKMIQRG 144
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 236/458 (51%), Gaps = 5/458 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ L PKR++ ++ ++N AL IF +F P +SH +H I+ +L + V
Sbjct: 5 PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRF-PGYSHTPYVFHHILKRLFDPKLVAHV- 62
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLN 157
S + EL + + KC E++ +TVI+ Y P+ A+ F R+ E F Q +RS N+LLN
Sbjct: 63 SRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 122
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
AL+++ ++D F + PN+ T NILIK C+K + A +L+ M G
Sbjct: 123 ALIESNKWDEAESFFL-YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ ++ T++ G + +A ++F ++ +RG PD Y +L+DG+ K G + +A ++
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241
Query: 278 MDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ + + V PN +Y VMI CK K E+ + M + + +I LC
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLT 396
G ++ A ++K + PD + +T+++ + G+I E +L+ E+ ++++
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS 361
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN LI G+ E+A++ EA +W+ + EK + TY +L+ G CK G + + ILEE
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ + ++S +I GL G EV V+ T G
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 225/473 (47%), Gaps = 54/473 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + R++ D A ++ ++ + FS + +Y ++I+ LA+ L E+ +
Sbjct: 155 LIKISCRKKQFDKAKELLNWM--WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 107 ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQN 162
P++ C + +I + G A + + R+ K +V ++ S N ++N L +
Sbjct: 213 RGVTPDVAC----YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 163 KRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
++D + H M KN R + +++T + LI LC +++GA RV EM G+ P
Sbjct: 269 GKFDESFEIWHRMKKNERGQ-----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFG-------------DILDRG-------------W- 251
++V + T+L GY+ G IE ++ +IL RG W
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWE 383
Query: 252 -------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D+ TY VL+ G K G L A+ +++E E+ + + Y MI C+
Sbjct: 384 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ E +LD M + P+ +C VI+ K+EDA + ++ K C P +
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 503
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T+I+ L K + EA L E +G P+++TY+ L+ G+C+ +L A LW +EK
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
G +P+V +N++I G C G ++ +++ EM + C PN + + L+EG Y+
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 184/386 (47%), Gaps = 12/386 (3%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
D + +I+H K + TY ++IH L + D + E+ +N P++
Sbjct: 271 FDESFEIWHRMKK--NERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV-- 326
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
++ T++ Y AGR E ++ + +EK R+V S N L+ L +N + D +++
Sbjct: 327 --VYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWE 383
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
K + T +L+ LCK + A+ +L+E + + +++++ G
Sbjct: 384 LLPEK-DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCRE 442
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ V + G P+ +++G+++ +L DA++ M G P VTY
Sbjct: 443 GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTY 502
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I K ++ EA L+ +ML + + P+ +++ LC+ K++ A LW + L
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
K PD + + IIH LC GK+ +A +L+ E +R +P+L+T+NTL+ G + +
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFER 622
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQG 438
A ++WD +++ N + QG
Sbjct: 623 ASKIWDHILQSWSSSNCYYMEHTCQG 648
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 138/292 (47%), Gaps = 9/292 (3%)
Query: 245 DILDR-----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
DI R G P +Y L++ I+ + +A E G+ PN TY ++I+
Sbjct: 99 DIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKI 158
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K+ +A+ LL+ M ++ + P +I+ L + G + DA +L+ + + PD
Sbjct: 159 SCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPD 218
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLW 417
A + +I K+G I A ++++ +G P++ +YN +I G+C+ + E+ +W
Sbjct: 219 VACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIW 278
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M + +++TY+ LI G C GN R+ +EM + G P+ ++ ++ G +
Sbjct: 279 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G E ++ + G S+N L+ + + +D + L K+C
Sbjct: 339 GRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDC 390
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 236/458 (51%), Gaps = 5/458 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ L PKR++ ++ ++N AL IF +F P +SH +H I+ +L + V
Sbjct: 5 PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRF-PGYSHTPYVFHHILKRLFDPKLVAHV- 62
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLN 157
S + EL + + KC E++ +TVI+ Y P+ A+ F R+ E F Q +RS N+LLN
Sbjct: 63 SRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 122
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
AL+++ ++D F + PN+ T NILIK C+K + A +L+ M G
Sbjct: 123 ALIESNKWDEAESFFL-YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ ++ T++ G + +A ++F ++ +RG PD Y +L+DG+ K G + +A ++
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241
Query: 278 MDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ + + V PN +Y VMI CK K E+ + M + + +I LC
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLT 396
G ++ A ++K + PD + +T+++ + G+I E +L+ E+ ++++
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS 361
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN LI G+ E+A++ EA +W+ + EK + TY +L+ G CK G + + ILEE
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ + ++S +I GL G EV V+ T G
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 225/473 (47%), Gaps = 54/473 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + R++ D A ++ ++ + FS + +Y ++I+ LA+ L E+ +
Sbjct: 155 LIKISCRKKQFDKAKELLNWM--WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 212
Query: 107 ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQN 162
P++ C + +I + G A + + R+ K +V ++ S N ++N L +
Sbjct: 213 RGVTPDVAC----YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 163 KRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
++D + H M KN R + +++T + LI LC +++GA RV EM G+ P
Sbjct: 269 GKFDESFEIWHRMKKNERGQ-----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFG-------------DILDRG-------------W- 251
++V + T+L GY+ G IE ++ +IL RG W
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWE 383
Query: 252 -------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D+ TY VL+ G K G L A+ +++E E+ + + Y MI C+
Sbjct: 384 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ E +LD M + P+ +C VI+ K+EDA + ++ K C P +
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 503
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T+I+ L K + EA L E +G P+++TY+ L+ G+C+ +L A LW +EK
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
G +P+V +N++I G C G ++ +++ EM + C PN + + L+EG Y+
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 204/403 (50%), Gaps = 10/403 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++IH L + D + E+ +N P++ ++ T++ Y AGR E ++
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV----VYNTMLNGYLRAGRIEECLEL 347
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ +EK R+V S N L+ L +N + D +++ K + T +L+ LC
Sbjct: 348 WKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLC 405
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+ +L+E + + +++++ G G ++ V + G P+
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+++G+++ +L DA++ M G P VTY +I K ++ EA L+ +M
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L + + P+ +++ LC+ K++ A LW + L K PD + + IIH LC GK+
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +L+ E +R +P+L+T+NTL+ G + + A ++WD +++ G +P++ +YN+
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNIT 645
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++G C + + L + +D+G P ++++L+ + ++G
Sbjct: 646 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 138/292 (47%), Gaps = 9/292 (3%)
Query: 245 DILDR-----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
DI R G P +Y L++ I+ + +A E G+ PN TY ++I+
Sbjct: 99 DIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKI 158
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K+ +A+ LL+ M ++ + P +I+ L + G + DA +L+ + + PD
Sbjct: 159 SCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPD 218
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLW 417
A + +I K+G I A ++++ +G P++ +YN +I G+C+ + E+ +W
Sbjct: 219 VACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIW 278
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M + +++TY+ LI G C GN R+ +EM + G P+ ++ ++ G +
Sbjct: 279 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G E ++ + G S+N L+ + + +D + L K+C
Sbjct: 339 GRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDC 390
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 4/263 (1%)
Query: 151 SLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ ++++N L + R D V ++ + ++H K PN CN +I + +E A+R
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCK--PNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M S G P +VT+ T++ G A + ++L +GW P+ TY++LM+G +
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+L A+ + + + G +P+ + ++I C K +A L +M QRK VP+
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHN 608
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFER 388
+++ + E A ++W +L+ PD + + LC +I +A D +R
Sbjct: 609 TLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 668
Query: 389 GSIPSLLTYNTLIAGMCESAELT 411
G +P+ +T+N L+ + ++ LT
Sbjct: 669 GVLPTAITWNILVRAVLDNGALT 691
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 244/492 (49%), Gaps = 60/492 (12%)
Query: 44 PKRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLT 102
P L+ +F + DL L F + K HN + + ++H LA A+ ++ + +LL
Sbjct: 73 PSSLLQHLFNSEAQPDLILCYFKWTQKEFGAI-HNVEQFCRLLHLLANAKNYNKIRALLD 131
Query: 103 ELKQNPEIKCGENLF--ITVIRNYGLA---------------GRPELAVKTFLRIEKFNV 145
+N +F ++V+ ++G A G +LA++ F R +
Sbjct: 132 SFAKNAHYS-NSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGF 190
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ S S N +L +LV+ R +V ++K + ++ NV T +++I LCK + A
Sbjct: 191 RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR-RIGVNVVTFDVVINGLCKVGKFQKAG 249
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRG------------------------------- 234
V+++M + G P+++T+ TI+ GY G
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309
Query: 235 ----DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
++ AK+VF ++ +G P+ TY L++G G+L +A+ + D+M G++PN
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I FCK K EAR +LDD+ +R P+ +ID + G+++DA L
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAE 409
+L P+ + + +I C+EG + EA+KL E E G L+TYN L+ +C+ E
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489
Query: 410 LTEAGRLWDDMV---EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+A RL D+M +KG N+ TYN+LI+GFC G +E R+L EML+KG PN+T+
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549
Query: 467 FSLLIEGLYESG 478
+ +L + + E G
Sbjct: 550 YDILRDEMMEKG 561
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 207/423 (48%), Gaps = 28/423 (6%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
LV + +DLAL+ F AG + F + + + ++ L + VES+ E+ +
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDY--GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ G N+ F VI G+ + A ++ + SV + NT+++ + +
Sbjct: 223 R---RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ K K ++ PN T NILI C+ ++V A +V +EM G+ PN+VT+
Sbjct: 280 MFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYN 338
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ G G ++ A + + G P+ TY L++G+ K L +A +++D++
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ PN +T+ +I+A+ K + +A L ML P+ + +I C EG V++A
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF----ERGSIPSLLTYNTL 400
+L K + D + ++ LCK+G+ +A +L DE ++G +++TYN L
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVL 518
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G C +L EA RL ++M+EKG+ PN TY++L +EM++KG
Sbjct: 519 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL----------------RDEMMEKGF 562
Query: 461 FPN 463
P+
Sbjct: 563 IPD 565
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 213/441 (48%), Gaps = 31/441 (7%)
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
PN SH +DT I +L + + +++++ E NP ++LF + +P+
Sbjct: 42 PN-SHTFDT--PTISQLIAKQHWSKLKTIVKE--TNPS-SLLQHLFNS-------EAQPD 88
Query: 132 LAVKTFLRIEK-----FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR-------HKF 179
L + F +K NV++ R L+ L NA NK L+ KN+ H
Sbjct: 89 LILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL 148
Query: 180 KVV-----PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
V+ N ++L+ A K +++ A+ D G + ++ +L V G
Sbjct: 149 SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEG 208
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
I + V+ +++ R + T+ V+++G K+G+ A V+++M+ G P+ +TY
Sbjct: 209 RIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN 268
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I+ +CK K +A LL +M+ ++ P+ +ID C + V A ++++ + R+
Sbjct: 269 TIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
P+ +++I+ LC GK+ EA L D+ G P+++TYN LI G C+ L EA
Sbjct: 329 GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ DD+ ++G+ PNV T+N LI + K G + + MLD G PN ++++ LI G
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 474 LYESGNEGEVGKVVSMATASG 494
GN E K+ +G
Sbjct: 449 FCREGNVKEARKLAKEMEGNG 469
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 248/464 (53%), Gaps = 6/464 (1%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + +++ +Q++ AL++F+ K F H+ TY II KL F A+E++L
Sbjct: 5 LLPKHVAAVLKQQKDPLKALEMFNKV-KREDGFKHSLLTYKCIIQKLGFHGNFVAMENVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
E + + + E ++I +++YG G+ + AV F R++ +N + SV S N ++N LV+
Sbjct: 64 AETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVE 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ + H +F ++ +VP+V+T I IK+ C+ A+R+L+ M S G N V
Sbjct: 124 SGYFKQAHKVFLRMKN-VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAV 182
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+ T++ G+ A +F D+L G PD +T+ L+ K G + ++ ++++++
Sbjct: 183 AYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKV 242
Query: 282 EDNGVEPNEVTYGVMIEAFC-KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
G+ N T+ + I+ C KG SG A ++LD +++ P +I LC+
Sbjct: 243 LKKGMCSNLFTFNIFIQGLCRKGMLSG-AMSMLDSVIREGLTPDVVTYNTLICGLCKNSN 301
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNT 399
V +A + +L+ PD +T+I CK G + A+K+ +G +P TY +
Sbjct: 302 VVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCS 361
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G+C++ E+ A L++ + KG++P V YNMLI+G C+ G + ++++ EM + G
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
C + +++L+I GL + G + +++ A A G V D + F
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYV-PDVFTF 464
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 168/323 (52%), Gaps = 3/323 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N L QN D +F + K + P V N+LIK LC++ + A+++++EM
Sbjct: 361 SLINGLCQNDEIDRALALFNAALGK-GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSE 419
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G ++ T+ ++ G G + +A + D + +G+VPD T+ L+DGY K ++
Sbjct: 420 NGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMET 479
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
++++++M +GV P+ +TY ++ K K+ + + M+++ VP+ + +
Sbjct: 480 TIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTE 539
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
LC+ GKV +A +L +L K PD +TII G + A +LF E+ +
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599
Query: 393 -SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ TYN +I E +L +L+ +M G P+ +TY ++I GFC GN G +
Sbjct: 600 HTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKF 659
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
L EM++KG P+ T+F +I L
Sbjct: 660 LLEMIEKGFIPSLTTFGRVINCL 682
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
TY+S+++ L++A E L+ + E C N I L AG+ A+
Sbjct: 498 TYNSVLNGLSKAVK---NEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLV 554
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
I + S T+++ N + +F+ ++KV T NI+I A +
Sbjct: 555 DEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAE 614
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
K D+ ++ EM + G P+ T+ ++ G+ G+ ++ + +++++G++P TT
Sbjct: 615 KLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTT 674
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+ +++ R+ +AV ++ M NG+ P V
Sbjct: 675 FGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 251/477 (52%), Gaps = 6/477 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P+ L PK ++ ++ ++N A +F A + HP ++H+ YH I+ +L+ AR V
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATR-HPGYAHSAVVYHHILRRLSEARMVTHV 62
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLL 156
++ EL ++ E KC E++ ++VI+ YG P+ A+ F R+ E F + +RS NTLL
Sbjct: 63 GRIV-ELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLL 121
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
NA V+ K++ V +F V PN+ T N+LIK CKK + E A L+ M G
Sbjct: 122 NAFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGF 180
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++ +++T++ G +++A +F ++ +R PD T Y +L+DG++K A++
Sbjct: 181 KPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQ 240
Query: 277 VMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ D++ ED+ V PN T+ +MI K + + + D M Q + +I L
Sbjct: 241 LWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGL 300
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLL 395
C+EG V+ A ++ L+ + D +T++ C+ GKI E+ +L+ E+ + +++
Sbjct: 301 CDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIV 360
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+YN LI G+ E+ ++ EA +W M KG + TY + I G C G + + +++E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
KG + +++ +I+ L + E +V + G + S N L+ ++ D
Sbjct: 421 ESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 221/473 (46%), Gaps = 54/473 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ M +++ + A ++ K F + +Y ++I+ LA+ D L E+ +
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWK--EGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSE 212
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQN 162
P++ C + +I + ++A++ + ++ E +V +V++ N +++ L +
Sbjct: 213 RRVAPDVTC----YNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 163 KRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
R D + M +N R K +++T + LI LC + +V+ A V +E+
Sbjct: 269 GRVDDCLKIWDRMKQNEREK-----DLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI 323
Query: 219 NLVTHTTILGGY-----------VWR-----------------------GDIENAKRVFG 244
++VT+ T+LGG+ +WR G I+ A ++
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ +G+ D TTY + + G G + A+ VM E+E G + Y +I+ CK +
Sbjct: 384 LMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKR 443
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA NL+ +M + +S +C +I L + ++ DA L + + + C+P +
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYN 503
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I LC+ GK EA E E G P L TY+ L+ G+C ++ A LW ++
Sbjct: 504 ILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQS 563
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
G+EP+V +N+LI G C +G + + ++ M + C N +++ L+EG ++
Sbjct: 564 GLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFK 616
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 187/401 (46%), Gaps = 14/401 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR-NYGLAGRPELA-VKTF 137
TY S+IH L D ES+ EL + FI V+ N L G +K
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKA-------FIDVVTYNTMLGGFCRCGKIKES 344
Query: 138 LRIEKFNVQRS---VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
L + + QR+ + S N L+ L++N + D ++++ K N T I I
Sbjct: 345 LELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNT-TYGIFIHG 403
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LC V A+ V+ E+ S G ++ + +I+ + +E A + ++ G +
Sbjct: 404 LCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELN 463
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+ L+ G I+ RL+DA +M M NG P V+Y ++I C+ K GEA +
Sbjct: 464 SHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVK 523
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ML+ P ++ LC + K+E A ELW + L+ PD + + +IH LC G
Sbjct: 524 EMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVG 583
Query: 375 KIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ +A + E R +L+TYNTL+ G + + A +W M + G++P++ +YN
Sbjct: 584 KLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYN 643
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+++G C I ++ + G FP ++++L+ +
Sbjct: 644 TILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 197/441 (44%), Gaps = 44/441 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+ +I + + F+ L + + P++ + TVI + G+ + A
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFS----YSTVINDLAKTGKLDDA 203
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ F + + V V N L++ ++ K + + ++ V PNV T NI+I
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMIS 263
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
L K V+ +++ D M +L T+++++ G G+++ A+ VF ++++R
Sbjct: 264 GLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI 323
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY ++ G+ + G++ +++++ ME N V+Y ++I+ + K EA +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M + Y + I LC G V A + + + K D ++II LCK+
Sbjct: 383 RLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKK 442
Query: 374 GKIWEAKKLFDEFER------------------------------------GSIPSLLTY 397
++ EA L E + G +P++++Y
Sbjct: 443 RRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSY 502
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N LI G+CE+ + EA +M+E G++P++ TY++L+ G C+ + + + + L
Sbjct: 503 NILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQ 562
Query: 458 KGCFPNKTSFSLLIEGLYESG 478
G P+ ++LI GL G
Sbjct: 563 SGLEPDVMMHNILIHGLCSVG 583
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
N+ I + G G VK L + ++ +++ + LL L ++++ +L ++
Sbjct: 503 NILICGLCEAGKFGEASAFVKEML---ENGLKPDLKTYSILLGGLCRDRKIELALELW-- 557
Query: 175 SRHKF---KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
H+F + P+V NILI LC ++ A+ V+ M NLVT+ T++ GY
Sbjct: 558 --HQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYF 615
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
D A ++G + G PD +Y ++ G R++ A++ D+ ++G+ P
Sbjct: 616 KVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVY 675
Query: 292 TYGVMIEAFCKGK 304
T+ +++ A K
Sbjct: 676 TWNILVRAVVNRK 688
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 225/448 (50%), Gaps = 26/448 (5%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ------NPEIKCG 113
AL++FH + + + N Y +IIH L A+ + L+ +L Q I C
Sbjct: 53 ALELFHSVSR-RADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111
Query: 114 --------------ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
N+F +I + G E A+ + K +V ++++ N +L+ L
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGL 168
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ R+D + ++ + + PNV T LI C++ D A R+ DEM + P
Sbjct: 169 VKKGRFDTMWKVYGDMVAR-GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+V +T ++ G I A+ +F + + G +P+ TY +MDGY K+ + A+++
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM +G+ PN VT+G++I+ CK + AR L DM VP+ + +ID C+ G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN 398
+ +A L + + +PD S +I LC ++ EA L E ++G +P+ +TYN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TLI G C+ + +A + M EKG+EPN+ T++ LI G+CK G + + + EM+ K
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKV 486
G P+ +++ LI+G ++ GN E ++
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRL 495
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 159/299 (53%), Gaps = 2/299 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+ L R MF+ R+ ++PN++T N ++ CK V+ A+ + EM
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD 292
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++PN+VT ++ G ++ +A++ D+ G VP+ Y L+DGY K G L++A
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ + E+E + + P+ TY ++I+ C + EA LL +M ++ ++P++ +ID
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
C+EG +E A E+ ++ K P+ ST+I CK GK+ A L+ E +G +P
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++ Y LI G + EA RL +M E G+ PNVFT + LI G CK G + I++
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 185/383 (48%), Gaps = 9/383 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF +V R LA P+L + + R L L +QN R + N
Sbjct: 56 LFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNV 115
Query: 176 RHKF---KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ K PNVF +LI A + VE A+ V +M ++P + +L G V
Sbjct: 116 LSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVK 170
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+G + +V+GD++ RG P+ TY L+DG + G A ++ DEM + + P V
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++I C + EA ++ M +P+ ++D C+ V+ A EL++ +L
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELT 411
+P+ +I LCK ++ A+K L D G +P++ YN LI G C++ L+
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA L ++ + + P+VFTY++LI+G C + +E +L+EM KG PN +++ LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 472 EGLYESGNEGEVGKVVSMATASG 494
+G + GN + +V S T G
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKG 433
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 30/293 (10%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I+ F++ ++++ TL ++LV+ K+ +H + N F P +F LI
Sbjct: 629 IDSFSLMFALKAC-TLKSSLVEGKQ---MHALVIN----FGFEPIIFLQTSLISMYSATG 680
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+V A + DE+PS NL++ T+++ YV A ++F + PD T T
Sbjct: 681 NVADAHNMFDEIPS----KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVT 736
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
V + LG L + + G++ + +I + K + G AR +
Sbjct: 737 VALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPND 796
Query: 320 KYVPSSALCCKVIDLLCEEGK-----VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ C L+ EEGK +++ L R+ CM D LC+ G
Sbjct: 797 VTFMGVLMACSHAGLV-EEGKQHFRSMKEDYSLRPRISHFGCMVD---------LLCRAG 846
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+ EA + + P+ + + TL+ G C + + L + +++ +P
Sbjct: 847 LLTEAYEFI--LKMPVRPNAVVWRTLL-GACSLQGMWDKKMLVRNQIKQRRDP 896
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 237/467 (50%), Gaps = 45/467 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T + ++H ++ FD +++++E+++ P++ L R AG + A
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR----AGDVDAA 211
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + ++ + + N++L L +++R+D +F+ + + V P+V + NILI
Sbjct: 212 IALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR-AMDQCSVAPDVRSFNILIG 270
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ +VE A++ EM G+ P++V+ + ++G + RG +++A ++ G VP
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D YT+++ G+ + G +++A++V DEM G P+ VTY ++ CK + +A LL
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++M +R P +I C +G E A +L+ LL + PD +++I +C++
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + +A +L+D+ R P+ +TY+ LI CE ++ EA D+MV KG PN+ TY
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTY 510
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLD-----------------------KGCF-------- 461
N +I+G+C+ GN K+G + L++M+ G F
Sbjct: 511 NSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570
Query: 462 ----PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
P+ +++++I G E GN E G+V ASG +E D + ++
Sbjct: 571 EMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG-IEPDRYTYM 616
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 226/468 (48%), Gaps = 11/468 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + L+ FR ++D A+ + + T++S++ L + R FD
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMA--NKGLKPGIVTFNSVLKGLCKHRRFDKA 246
Query: 98 ESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+ + + Q P+++ F +I + G E A+K + +++ V V S +
Sbjct: 247 KEVFRAMDQCSVAPDVRS----FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSC 302
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+ + D + + +VP+ ++I C+ + A+RV DEM +
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMK-GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGL 361
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G +P++VT+ T+L G + + +A+ + ++ +RG PD T+T L+ GY + G A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKA 421
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+++ D + + P+ V Y +I+ C+ +A L DDM R+ P+ +ID
Sbjct: 422 LQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDS 481
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
CE+G+VE+A ++ K +P+ ++II C+ G + + ++ + + +I P
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
L+T+NTLI G + + A +++ M ++ V+P+ TYNM+I GF + GN +E R+ +
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
+M G P++ ++ LI G +GN E ++ G D +
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDKF 649
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 190/371 (51%), Gaps = 2/371 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG P LA + + + + + + +LN ++++ ++ +D + + K V P+V
Sbjct: 135 AGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVI-SEMEKRCVFPDVV 193
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N+LI A + DV+ AI ++D M + G+ P +VT ++L G + AK VF +
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
PD ++ +L+ G+ ++G + +A+K EM+ GV P+ V++ +I F K
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A L +M VP + VI C G + +A + ++ C+PD +T+
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
++ LCK+ ++ +A++L +E ERG P L T+ TLI G C +A +L+D ++ + +
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+V YN LI G C+ G+ + + ++M + FPN ++S+LI+ E G E
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFG 493
Query: 486 VVSMATASGSV 496
+ + G++
Sbjct: 494 FLDEMVSKGNL 504
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 97/226 (42%), Gaps = 37/226 (16%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P + ++I + + +K EA +L + ++ ++ L G A E
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-------------------- 387
++ +L + + + ++H CK + +A + E E
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 388 ----------------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+G P ++T+N+++ G+C+ +A ++ M + V P+V +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+N+LI GFC++G +E ++ +EM +G P+ SFS LI GL+ +
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFST 309
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 193/351 (54%), Gaps = 2/351 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + N + SV L + + K+Y V + N F+V NV++ NILI
Sbjct: 77 ALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTV-VSLCNQMDLFRVTHNVYSLNILI 135
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+ + V+ ++ VL +M +G+ P+ +T ++ G G I+ A +F +++ RG
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ +YT +++G K G + AV V +ME NG +PN VTY +I++ CK + +A
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M++R P+ ++ C G++ +A L+K ++ ++ MP+ + ++ LCK
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK 315
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + EA+ +F+ E+G P + TYN L+ G C + EA ++++ M+ KG P +
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
YN+LI G+CK E +L EM K P+ ++S L++GL + G E
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 227/455 (49%), Gaps = 6/455 (1%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
+HN + + +I+ L R D S+L ++ + I F +I G+ + AV
Sbjct: 125 THNVYSLNILINCLCRLNHVDFSVSVLGKMFK-LGIHPDAITFNALINGLCNEGKIKEAV 183
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F + K + +V S T++N L + + +FK PNV T + +I +
Sbjct: 184 ELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN-GCKPNVVTYSTIIDS 242
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK V A+ L EM G+ PN+ T+ +I+ G+ G + A R+F +++ R +P+
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN 302
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+T+L+DG K G +++A V + M + GVEP+ TY +++ +C + EA+ + +
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M+++ P + +I+ C+ ++++A L + K PD ST++ LC+ G
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG 422
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ EA LF E G P+L+TY L+ G C+ L EA +L M EK +EPN+ Y
Sbjct: 423 RPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYT 482
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+LI+G G + + ++ G P+ +++++I+GL + G E +
Sbjct: 483 ILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542
Query: 494 GSV-ESDSWNFLLTRIVSDLDSGAGA--LDELLVK 525
G + S S+N ++ + + DS +DE++ K
Sbjct: 543 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 577
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 221/465 (47%), Gaps = 46/465 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLA-RARAFDAVESLLTE 103
L++ + R ++D ++ + K HP+ T++++I+ L + +AVE
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPD----AITFNALINGLCNEGKIKEAVELFNEM 189
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+K+ E + TVI G +AV F ++E+ + +V + +T++++L +++
Sbjct: 190 VKRGHEPNVIS--YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR 247
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ + F + + + PNVFT N ++ C + A R+ EM ++PN VT
Sbjct: 248 LVNDA-MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T ++ G G + A+ VF + ++G PD +TY LMDGY + +A KV + M
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR------------------------ 319
G P +Y ++I +CK ++ EA++LL +M +
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426
Query: 320 ---------KYVPSSALCCKVI--DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
Y P L VI D C+ G +++A +L K + K P+ + +I
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+ GK+ AK+LF + F G+ P + TY +I G+ + EA L+ M + G P
Sbjct: 487 GMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
N +YN++IQGF + ++ IR+++EM+ K N ++F +L++
Sbjct: 547 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 250/485 (51%), Gaps = 6/485 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P+ L PK ++ ++ ++N A +F A + HP ++H+ YH I+ +L+ R + V
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATR-HPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLL 156
S + EL ++ E KC E++ ++VI+ YG P+ A+ F R+ E F + ++RS NTLL
Sbjct: 63 -SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
NA V+ K++ V +F V PN+ T N+LIK CKK + E A LD M G
Sbjct: 122 NAFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++ +++T++ G +++A +F ++ +RG PD T Y +L+DG++K A++
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240
Query: 277 VMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ D + ED+ V PN T+ +MI K + + + + M Q + +I L
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLL 395
C+ G V+ A ++ L + D +T++ C+ GKI E+ +L+ E + +++
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+YN LI G+ E+ ++ EA +W M KG + TY + I G C G + + +++E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDS 514
G + +++ +I+ L + E +V + G + S N L+ ++ D
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 515 GAGAL 519
G +
Sbjct: 481 GEASF 485
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 219/476 (46%), Gaps = 54/476 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ M +++ + A + K F + +Y ++I+ LA+A D L E+ +
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWK--EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQN 162
P++ C + +I + + A++ + R+ E +V +V++ N +++ L +
Sbjct: 213 RGVAPDVTC----YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 163 KRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
R D + M +N R K +++T + LI LC +V+ A V +E+
Sbjct: 269 GRVDDCLKIWERMKQNEREK-----DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 219 NLVTHTTILGGY-----------VWR-----------------------GDIENAKRVFG 244
++VT+ T+LGG+ +WR G I+ A ++
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ +G+ D TTY + + G G + A+ VM E+E +G + Y +I+ CK K
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA NL+ +M + +S +C +I L + ++ +A + + + C P +
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I LCK GK EA E E G P L TY+ L+ G+C ++ A LW ++
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G+E +V +N+LI G C +G + + ++ M + C N +++ L+EG ++ G+
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGD 619
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 189/396 (47%), Gaps = 4/396 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+IH L A D ES+ EL + + + T++ + G+ + +++ + R
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDER-KASIDVVTYNTMLGGFCRCGKIKESLELW-R 349
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I + ++ S N L+ L++N + D ++++ K + T I I LC
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNG 408
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V A+ V+ E+ S G ++ + +I+ + +E A + ++ G ++
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G I+ RL +A + EM NG P V+Y ++I CK K GEA + +ML+
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P ++ LC + K++ A ELW + L+ D + + +IH LC GK+ +A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ E R +L+TYNTL+ G + + A +W M + G++P++ +YN +++G
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
C + ++ + G FP ++++L+ +
Sbjct: 649 LCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + R + +DLAL+++H + ++ +IH L D +++ ++
Sbjct: 540 LLCGLCRDRKIDLALELWHQF--LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
C NL + T++ + G A + + K +Q + S NT++ L +
Sbjct: 598 R---NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
F ++R+ + P V+T NIL++A+ +
Sbjct: 655 VSYAMEFFDDARNH-GIFPTVYTWNILVRAVVNR 687
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 241/493 (48%), Gaps = 37/493 (7%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQ-QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKL 88
+ P + P+ R+V + ++ LAL F +A P FSH +++S++ L
Sbjct: 28 AIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVL 87
Query: 89 ARARAF-DAVESLLTELKQN--PEIKCGENLFITVIRNYG-------------LAG-RPE 131
R + +A + +EL + P++ C N+ I+ N G AG P+
Sbjct: 88 VRCKKHREAGDLFRSELLASCEPDV-CSYNIVISGFCNAGDLHAALELLEEMKSAGFAPD 146
Query: 132 LAVKTFL---------------RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
T + + +V + L+ A + K+ + + + R
Sbjct: 147 AFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMR 206
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ PN+ T N+L+ ALCK V A V+ +M G PN++T +++ G+ RG++
Sbjct: 207 ER-GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNV 265
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A+++ G ++ +G P+ TY+ L+DG K + +A +V++EM+ GV P+ TY +
Sbjct: 266 DDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSAL 325
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I CK K EA +L M P + +I C+ GK+ +A + + + ++
Sbjct: 326 IHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 385
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAG 414
PD +T+I LCK GKI EA+ + ++ + +P ++TY+T+I G+C+S L EA
Sbjct: 386 SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 445
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+L D M + G P+V TY +I G CK G +E +L+ M GC PN +++ LI GL
Sbjct: 446 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGL 505
Query: 475 YESGNEGEVGKVV 487
++ E +V+
Sbjct: 506 CKARKVDEAERVM 518
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 211/420 (50%), Gaps = 15/420 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ + T+ II +A A D L + +P + + +I + A + E A
Sbjct: 143 FAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVV----TYTALIAAFARAKKLEEA 198
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+K + + ++ + N L++AL + D+V M + PNV T N
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG-----FAPNVMTFN 253
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L+ CK+ +V+ A ++L M + GM PN+VT++ ++ G AK V ++ R
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PDA TY+ L+ G K ++ +A +++ M +G P+ V Y +I AFCK K EA
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 373
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIH 368
+ L +M +++ P VID LC+ GK+ +A + +++ + +PD ST+I+
Sbjct: 374 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVIN 433
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK + EA+KL D + G P ++TY T+I G+C+ L EA L M G P
Sbjct: 434 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
NV TY LI G CK E R++EEM + GC PN +++ ++ GL SG E ++V
Sbjct: 494 NVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLV 553
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 186/354 (52%), Gaps = 5/354 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N+LL LV+ K++ +F+ S P+V + NI+I C D+ A+ +L+E
Sbjct: 79 SWNSLLQVLVRCKKHREAGDLFR-SELLASCEPDVCSYNIVISGFCNAGDLHAALELLEE 137
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M S G P+ THT I+ GD++ A + G P+ TYT L+ + + +
Sbjct: 138 MKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKK 194
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L +A+K+++EM + G PN VTY V+++A CK G A++++ M++ + P+
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
++D C+ G V+DA +L ++ K P+ S +I LCK K EAK++ +E + RG
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P TY+ LI G+C++ ++ EA ++ M G P+V Y+ +I FCK G E
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+ L+EM + P+ +++ +I+GL + G E ++ SG V D +
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTY 428
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 214/439 (48%), Gaps = 18/439 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAV 134
N TY ++I ARA+ + LL E+++ P N+ + + + G + V
Sbjct: 178 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 237
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNI 190
K + + +V + N+L++ + D L+ +M PNV T +
Sbjct: 238 KKMI---EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR-----PNVVTYSA 289
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK A VL+EM + G+ P+ T++ ++ G IE A+++ + G
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD Y+ ++ + K G+L +A K + EM P+ VTY +I+ CK K EA+
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409
Query: 311 NLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L+ M + V P VI+ LC+ + +A +L R+ + C PD +TII
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 469
Query: 370 LCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK G++ EA+ L +R G P+++TY TLI+G+C++ ++ EA R+ ++M G PN
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLD--KGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ TYN ++ G C G KE ++++ M D C P+ ++ ++ L S E ++
Sbjct: 530 LVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQL 589
Query: 487 VSMATASGSVESDSWNFLL 505
+ ++ S + + + L
Sbjct: 590 LEQMKSTTSSQQEQGSLTL 608
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 223/444 (50%), Gaps = 26/444 (5%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ------NPEIKCG 113
AL++FH + + + N Y +IIH L A+ + L+ +L Q I C
Sbjct: 53 ALELFHSVSR-RADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111
Query: 114 --------------ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
N+F +I + G E A+ + K +V ++++ N +L+ L
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGL 168
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ R+D + ++ + + PNV T LI C++ D A R+ DEM + P
Sbjct: 169 VKKGRFDTMWKVYGDMVAR-GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+V +T ++ G I A+ +F + + G +P+ TY +MDGY K+ + A+++
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM +G+ PN VT+G++I+ CK + AR L DM VP+ + +ID C+ G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN 398
+ +A L + + +PD S +I LC ++ EA L E ++G +P+ +TYN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TLI G C+ + +A + M EKG+EPN+ T++ LI G+CK G + + + EM+ K
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 459 GCFPNKTSFSLLIEGLYESGNEGE 482
G P+ +++ LI+G ++ GN E
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKE 491
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 178/354 (50%), Gaps = 15/354 (4%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+ L R MF+ R+ ++PN++T N ++ CK V+ A+ + EM
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD 292
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++PN+VT ++ G ++ +A++ D+ G VP+ Y L+DGY K G L++A
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ + E+E + + P+ TY ++I+ C + EA LL +M ++ ++P++ +ID
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
C+EG +E A E+ ++ K P+ ST+I CK GK+ A L+ E +G +P
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL- 452
++ Y LI G + EA RL +M E G+ PNVFT + LI G CK G + I++
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532
Query: 453 -----------EEMLDKG-CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LD+ C PN ++ LI+GL G + K S SG
Sbjct: 533 AKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSG 586
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 165/314 (52%), Gaps = 14/314 (4%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F VVPN+F N LI CK ++ A+ + E+ ++P++ T++ ++ G +E
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + ++ +G++P+A TY L+DGY K G + A++V +M + G+EPN +T+ +I+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K A L +M+ + +P +ID ++G ++A L K + P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLF-------------DEFERG-SIPSLLTYNTLIAGM 404
+ S +I LCK+G+I +A KLF +E +R P+ + Y LI G+
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + +A + + DM G+ P+VFT ++IQG + + ++ + + ++L G PN
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626
Query: 465 TSFSLLIEGLYESG 478
+ + +L +G ESG
Sbjct: 627 SVYRVLAKGYEESG 640
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 19/225 (8%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T+ ++I +A +A L TE+ P++ + +I + G + A
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA----YTALIDGHFKDGNTKEA 492
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFK-----------NSRHKFKV 181
+ +++ + +V +L+ L++ L ++ R D + L N +
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PN LI+ LC + A + +M G+ P++ T I+ G+ + +
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ DIL G +P+++ Y VL GY + G L A++ +++ G+
Sbjct: 613 LQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 240/464 (51%), Gaps = 17/464 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
W +++ ++ +I ++++ A+ IF A + N F H++ T+ +I +L A F
Sbjct: 9 WSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRL 68
Query: 97 VESLLTELKQNPEIKCG--ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E LL +K+ KC E++F+++ R YG +P AV+ F +++++ + S +S T
Sbjct: 69 AEELLCRMKEE---KCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYIT 125
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPS 213
+ LV + L L F + + P+V + N+LIKALCK ++ A+R+ EMP+
Sbjct: 126 VFAILVGENQLKLA-LRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPN 184
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P+ T+ T++ G G I AK +F ++ + P TY L+ G + L
Sbjct: 185 RGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDS 244
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++EM G++PN TY +++ CK S A LLD M+ R+++P+ ++
Sbjct: 245 AIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVH 304
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
LC+EGK+++A E+ R+ + PD + II C K EA DE G I P
Sbjct: 305 GLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISP 364
Query: 393 SLLT-------YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ LT +N ++ G+C + A +L+ M +G+ + T++ L+ FC G+
Sbjct: 365 NRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDL 423
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+ +++EM+ GC P++ +++ ++ ++ E ++V +
Sbjct: 424 HKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQV 467
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 125/233 (53%), Gaps = 2/233 (0%)
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
Y ++ + DAV+V +M++ EP++ +Y + + A M + P
Sbjct: 94 AYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPP 153
Query: 324 SSALCCKVIDLLCE-EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
S A +I LC+ G ++ A +++ + + C P + T+I LC+ GKI EAK+L
Sbjct: 154 SVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKEL 213
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F E E + P+++TY +LI G+C+S +L A RL ++M KG++PNVFTY+ L+ G CK
Sbjct: 214 FKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCK 273
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G + + +L+ M+ + PN ++S L+ GL + G E +++ G
Sbjct: 274 SGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQG 326
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 240/465 (51%), Gaps = 17/465 (3%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLF 117
ALQ F++A + F+HN +Y ++ L RAR + + L +K+ N +K + F
Sbjct: 102 ALQFFNWAPEL--GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFF 159
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
++IR+YG AG + +V+ F ++ V SV + N+LL L++ R ++ +F
Sbjct: 160 NSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLS 219
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V P+ +T NILI+ CK V+ R EM P+LVT+ T++ G G +
Sbjct: 220 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVN 279
Query: 238 NAKRVFGDILDRG--WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V ++ + PD TYT L+ GY + +A+ V +EM G++PNE+TY
Sbjct: 280 IAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNT 339
Query: 296 MIEAFCKGKKSGEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I+ C+ +K + + + + L ++P + +++ C G + DA E++++++
Sbjct: 340 LIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVL 399
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--------ERGSIPSLLTYNTLIAGMCE 406
N PD+A S +I LC+ G A++LFDE + G P + Y ++ +C
Sbjct: 400 NVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCR 459
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + +A R++ ++++G + + ++ +LI+G C+ G + G +L ML + P+ +
Sbjct: 460 NGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLET 518
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVS 510
+ LI+GL + G + + S V E+ +++ +L R+++
Sbjct: 519 YQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLA 563
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/421 (18%), Positives = 183/421 (43%), Gaps = 42/421 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY++++ L RA + +++ + K++ + + T++R Y + + A+ F
Sbjct: 264 TYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFE 323
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ ++ + + NTL+ L + ++ D + +F+ + +P+ T N L+ A C
Sbjct: 324 EMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNA 383
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI-------LDRGW 251
++ A+ V ++M + + P+ T++ ++ RG+ E A+++F ++ D G
Sbjct: 384 GNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGC 443
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P Y + + + G+ A +V ++ G + + +++ ++I+ C+
Sbjct: 444 TPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYE 502
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LL ML+R +VP +ID L ++G+ A + +++++ + +P+ + +I+ L
Sbjct: 503 LLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLL 562
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNT-------------------------------- 399
+G E+ + G I + +T
Sbjct: 563 AKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDME 622
Query: 400 -LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
LI + + + A +L +EK ++ + +I+G CK+ E + E+++K
Sbjct: 623 ELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEK 682
Query: 459 G 459
G
Sbjct: 683 G 683
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 238/466 (51%), Gaps = 34/466 (7%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+ ++ LAL+ F +F H TY +I KLA R D V+ LL ++K I C
Sbjct: 52 HEHDITLALEYFKSIAN-SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEG-ISC 109
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
E+LFI+VI +Y AG E A+KTF R++ F V+ +V+ N +L+AL+ R+ +++ ++
Sbjct: 110 SEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIY 169
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N + K + PNVFT NIL+KALCK + V+GA ++L EM S G P+ V++TT++
Sbjct: 170 SNMK-KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK 228
Query: 233 RGDIENAK------------------------------RVFGDILDRGWVPDATTYTVLM 262
G ++ A+ ++ +++++G P+ +YT ++
Sbjct: 229 LGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ G + ++ V+ +M G PN T+ +I+ F S EA + D M++ V
Sbjct: 289 NALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV 348
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ ++ LC + + DA ++ ++ C P+ S +I K G + A ++
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 383 FD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
++ G P+++ Y ++ +C ++ +A L ++M + PN T+N I+G C
Sbjct: 409 WNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCG 468
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G I++ ++M + GCFPN T+++ L++ L + GE +V
Sbjct: 469 SGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 191/422 (45%), Gaps = 5/422 (1%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
+F+ + Y+++I+ + + F+ LL E+ N I + T+I AG EL
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEM-MNKGIDPNVISYTTIINALSDAGNVEL 299
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
++ ++ ++ + +L+ K L F + + VVPNV N L+
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFL-KGGSHEALDFWDRMIREGVVPNVVAYNALM 358
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC K + A+ V ++M G PN+ T++ ++ GY GD++ A V+ ++ G
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCH 418
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ YT ++D + A +++ M+ PN VT+ I+ C + A +
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
D M P++ +++D L ++ + +A L K + + + +TII+ C
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EA +L + RG+ P +T N +I C+ ++ A +L D + P++
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y LI G C +E I L ML +G PN ++++L+ L+ N G G V +
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS--NMGHSGAVQFLDA 656
Query: 492 AS 493
+S
Sbjct: 657 SS 658
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAG 128
HPN Y ++ L R F+ L+ ++ C N F T I+ +G
Sbjct: 418 HPNVV----AYTCMVDVLCRNSMFNQAYCLIENMQVE---NCPPNTVTFNTFIKGLCGSG 470
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R + A+K F ++ + + N LL++L++++R+ + K+ H+ + N+ T
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR-GIELNLVTY 529
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N +I C + A+ +L +M G P+ +T ++ Y +G + A ++ +
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
W PD YT L+ G + +A+ + M G+ PN T+ V++
Sbjct: 590 GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSG 649
Query: 309 ARNLLD--DMLQRKYV 322
A LD ++Q K+V
Sbjct: 650 AVQFLDASSIMQPKFV 665
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 230/429 (53%), Gaps = 6/429 (1%)
Query: 48 VSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN 107
+++I R+++ AL+IF+ G+ F+HN+ TY ++IHKLA+ + F AV++LL ++
Sbjct: 63 INLIKREKDPQHALEIFNMVGE-QKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYE 121
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR-SVRSLNTLLNALVQNKRYD 166
K EN+F+ +++++ + E ++ F I+ ++ S+++++T LN LV++K+ D
Sbjct: 122 T-CKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQID 180
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-PSMGMVPNLVTHTT 225
L KV PN NIL+K CK D+E A+ V+ EM S PN++T++T
Sbjct: 181 LAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYST 240
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ G G ++ A +F +++ + + PDA TY+VL+ G+ G+ A K+M+ M N
Sbjct: 241 LIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSN 300
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G +PN Y V++ FCK + EA+ + D+M P + +I+ C G++++A
Sbjct: 301 GCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEA 360
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAG 403
EL K + C D + ++ LC+EG+ EA ++ + G + +Y ++
Sbjct: 361 MELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNF 420
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C+ EL ++ L M+ +G P+ T N L+ C+ G + L + G P
Sbjct: 421 LCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPE 480
Query: 464 KTSFSLLIE 472
S++ LIE
Sbjct: 481 PKSWAHLIE 489
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 166/358 (46%), Gaps = 3/358 (0%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 89
+ P ++ P ++++ + +DLA + Y + H N ++ ++
Sbjct: 152 AIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNE-HLKVRPNTCIFNILVKHHC 210
Query: 90 RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRS 148
++ ++ ++ E+K++ + T+I GR + A++ F + K +
Sbjct: 211 KSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPD 270
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + L+ + D + + R PNVF ++L+ CK+ +E A V
Sbjct: 271 ALTYSVLIKGFCHGGKADRARKIMEFMRSN-GCDPNVFNYSVLMNGFCKEGRLEEAKEVF 329
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DEM S G+ P+ V +TT++ + G I+ A + ++ + DA T+ VL+ G +
Sbjct: 330 DEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCRE 389
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR +A+++++ + GV N+ +Y +++ C+ + ++ LL ML R +VP A
Sbjct: 390 GRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATS 449
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+++ LCE G V++A L + P+ + +I ++C+E K+ +L DE
Sbjct: 450 NELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDEL 507
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-RKYVPSSALCCKVIDLLCEEGKVEDA 344
V PN + ++++ CK A ++ +M + R+ P+ +ID LC G++++A
Sbjct: 195 VRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEA 254
Query: 345 CELWKRLLRKN-CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLI 401
EL++ ++ K+ +PD S +I C GK A+K+ EF R G P++ Y+ L+
Sbjct: 255 IELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIM-EFMRSNGCDPNVFNYSVLM 313
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G C+ L EA ++D+M G++P+ Y LI FC +G E + +L+EM + C
Sbjct: 314 NGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCK 373
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ +F++L++GL G E +++ G
Sbjct: 374 ADAVTFNVLLKGLCREGRFDEALRMLENLAYEG 406
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 111/243 (45%), Gaps = 6/243 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF-ITVIRN-YGLAGRPELAVKTF 137
TY +I D ++ ++ N C N+F +V+ N + GR E A + F
Sbjct: 273 TYSVLIKGFCHGGKADRARKIMEFMRSN---GCDPNVFNYSVLMNGFCKEGRLEEAKEVF 329
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ ++ TL+N R D + K + K + T N+L+K LC+
Sbjct: 330 DEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMT-EMKCKADAVTFNVLLKGLCR 388
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A+R+L+ + G+ N ++ +L +G++E + + G +L RG+VP T
Sbjct: 389 EGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYAT 448
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ + G + +AV + + G P ++ +IE C+ +K L+D+++
Sbjct: 449 SNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELV 508
Query: 318 QRK 320
+++
Sbjct: 509 EKE 511
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 225/448 (50%), Gaps = 26/448 (5%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ------NPEIKCG 113
AL++FH + + + N Y +IIH L A+ + L+ +L Q I C
Sbjct: 53 ALELFHSVSR-RADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCS 111
Query: 114 --------------ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
N+F +I + G E A+ + K +V ++++ N +L+ L
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGL 168
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ R+D + ++ + + PNV T LI C++ D A R+ DEM + P
Sbjct: 169 VKKGRFDTMWKVYGDMVAR-GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+V +T ++ G I A+ +F + + G +P+ TY +MDGY K+ + A+++
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYX 287
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM +G+ PN VT+G++I+ CK + AR L DM VP+ + +ID C+ G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN 398
+ +A L + + +PD S +I LC ++ EA L E ++G +P+ +TYN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TLI G C+ + +A + M EKG+EPN+ T++ LI G+CK G + + + EM+ K
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKV 486
G P+ +++ LI+G ++ GN E ++
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRL 495
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 178/354 (50%), Gaps = 15/354 (4%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+ L R MF+ R+ ++PN++T N ++ CK V+ A+ + EM
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGD 292
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++PN+VT ++ G ++ +A++ D+ G VP+ Y L+DGY K G L++A
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ + E+E + + P+ TY ++I+ C + EA LL +M ++ ++P++ +ID
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
C+EG +E A E+ ++ K P+ ST+I CK GK+ A L+ E +G +P
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL- 452
++ Y LI G + EA RL +M E G+ PNVFT + LI G CK G + I++
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532
Query: 453 -----------EEMLDKG-CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LD+ C PN ++ LI+GL G + K S SG
Sbjct: 533 AKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSG 586
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 165/314 (52%), Gaps = 14/314 (4%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F VVPN+F N LI CK ++ A+ + E+ ++P++ T++ ++ G +E
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + ++ +G++P+A TY L+DGY K G + A++V +M + G+EPN +T+ +I+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K A L +M+ + +P +ID ++G ++A L K + P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLF-------------DEFERG-SIPSLLTYNTLIAGM 404
+ S +I LCK+G+I +A KLF +E +R P+ + Y LI G+
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + +A + + DM G+ P+VFT ++IQG + + ++ + + ++L G PN
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626
Query: 465 TSFSLLIEGLYESG 478
+ + +L +G ESG
Sbjct: 627 SVYRVLAKGYEESG 640
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 169/423 (39%), Gaps = 62/423 (14%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T+ ++I +A +A L TE+ P++ + +I + G + A
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA----YTALIDGHFKDGNTKEA 492
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFK-----------NSRHKFKV 181
+ +++ + +V +L+ L++ L ++ R D + L N +
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PN LI+ LC + A + +M G+ P++ T I+ G+ + +
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ DIL G +P+++ Y VL GY + G L A+ E GV+P + + +
Sbjct: 613 LQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE----GVQPLD-----RVNSEP 663
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCC-------------------------KVIDLLC 336
G + +R L + ++K SS L K + +
Sbjct: 664 WGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIG 723
Query: 337 EEG--KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--ERGSIP 392
++G + A +L++++ + PD ++ T+ C + + + + RG
Sbjct: 724 QKGDQRPNKALQLFRQMQMDDXQPD-IVTVTVALSACADLGALDMGEWIHAYIRHRGLDT 782
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
L N+LI + E+ A RL+D +K +V T+ +I G G A+E +++
Sbjct: 783 DLCLNNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLF 838
Query: 453 EEM 455
EM
Sbjct: 839 TEM 841
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T + + A ++ + + G+ +L + +++ Y G+I A+R+
Sbjct: 747 PDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRL 806
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED----------NG------V 286
F D D TT+T ++ G+ G+ +A+++ EM++ NG V
Sbjct: 807 F----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLV 862
Query: 287 EPNEVTY-GVMIEAFCKG---KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
PN+VT+ GV++ G + R++ +D R + S C ++DLLC G +
Sbjct: 863 LPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRI--SHFGC-MVDLLCRAGLLT 919
Query: 343 DACELWKRLLRKNCMPDNAISSTII 367
+A E +L+ P+ + T++
Sbjct: 920 EAYEF---ILKMPVRPNAVVWRTLL 941
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 238/466 (51%), Gaps = 34/466 (7%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+ ++ LAL+ F +F H TY +I KLA R D V+ LL ++K I C
Sbjct: 52 HEHDITLALEYFKSIAN-SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEG-ISC 109
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
E+LFI+VI +Y AG E A+KTF R++ F V+ +V+ N +L+AL+ R+ +++ ++
Sbjct: 110 SEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIY 169
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N + K + PNVFT NIL+KALCK + V+GA ++L EM S G P+ V++TT++
Sbjct: 170 SNMK-KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK 228
Query: 233 RGDIENAK------------------------------RVFGDILDRGWVPDATTYTVLM 262
G ++ A+ ++ +++++G P+ +YT ++
Sbjct: 229 LGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ G + ++ V+ +M G PN T+ +I+ F S EA + D M++ V
Sbjct: 289 NALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV 348
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ ++ LC + + DA ++ ++ C P+ S +I K G + A ++
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 383 FD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
++ G P+++ Y ++ +C ++ +A L ++M + PN T+N I+G C
Sbjct: 409 WNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCG 468
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G I++ ++M + GCFPN T+++ L++ L + GE +V
Sbjct: 469 SGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 193/424 (45%), Gaps = 40/424 (9%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
+F+ + Y+++I+ + + F+ LL E+ N I + T+I AG EL
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEM-MNKGIDPNVISYTTIINALSDAGNVEL 299
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
++ ++ ++ + +L+ K L F + + VVPNV N L+
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFL-KGGSHEALDFWDRMIREGVVPNVVAYNALM 358
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC K + A+ V ++M G PN+ T++ ++ GY GD++ A V+ ++ G
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCH 418
Query: 253 PDATTYTVLMD-----------------------------------GYIKLGRLTDAVKV 277
P+ YT ++D G GR+ A+KV
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
D+M ++G PN TY ++++ K ++ GEA L+ DM R + +I C
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
G + +A EL +++ + PD + +I CK+GK+ A +L D G P ++
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG-FCKIGNAKEGIRILEEM 455
Y +LI+G+C + EA M+ +G+ PNV T+N+L++ F +G++ ++ L+ +
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSG-AVQFLDAV 657
Query: 456 LDKG 459
L G
Sbjct: 658 LGSG 661
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 235/467 (50%), Gaps = 11/467 (2%)
Query: 62 QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
Q+F A K +F T S+I A F +VE LL+ ++ + E FI V
Sbjct: 62 QMFKSAPKMG-SFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVII-ERSFIVVF 119
Query: 122 RNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDL---VHLMFKNSRH 177
R YG A PE AV F R +++F +RSV+S N++LN ++ Y + NS
Sbjct: 120 RAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM 179
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ PN + N++IKALCK V+ AI V MP +P+ T+ T++ G I+
Sbjct: 180 NMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERID 239
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + ++ G P Y VL+DG K G L+ K++D M G PNEVTY +I
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLI 299
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
C K +A +LL+ M+ K +P+ +I+ L ++ + D L + +
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYR 359
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
+ I S +I L KEGK EA L+ + E+G P+++ Y+ +I G+C + EA +
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEI 419
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ M+ G PNV+TY+ L++GF K G ++E I++ EM + GC N+ +S+LI+GL
Sbjct: 420 LNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCG 479
Query: 477 SGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
G E V S G ++ D+ + + ++ L G G++D L
Sbjct: 480 VGRVKEAMMVWSKMLTIG-IKPDTVAY--SSMIKGL-CGIGSMDAAL 522
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 201/434 (46%), Gaps = 12/434 (2%)
Query: 60 ALQIFHYA--GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
L+ + Y + N S N +++ +I L + V+ + + PE KC + +
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK---LGFVDRAIEVFRGMPEKKCLPDGY 223
Query: 118 ITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
GL R + AV ++ S N L++ L + V + N
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNM 283
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
K PN T N LI LC K ++ A+ +L+ M S +PN VT+ T++ G V +
Sbjct: 284 FLK-GCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ R+ + +RG+ + Y+VL+ G K G+ +A+ + +M + G PN V Y
Sbjct: 343 AMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSA 402
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ C+ K EA+ +L+ M+ +P+ ++ + G E+A ++W+ +
Sbjct: 403 VIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETG 462
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
C + S +I LC G++ EA ++ + G P + Y+++I G+C + A
Sbjct: 463 CSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAAL 522
Query: 415 RLWDDMV---EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+L+ +M+ E +P+V TYN+L+ G C + + +L MLD+GC P+ + + +
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFL 582
Query: 472 EGLYESGNEGEVGK 485
L E + E G+
Sbjct: 583 NTLSEKSDSCEEGR 596
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 162/351 (46%), Gaps = 43/351 (12%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMF 172
E + T+I L G+ + AV R+ + + TL+N LV+ +R D L+
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLI 351
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+++ ++++ +LI L K+ E A+ + +M G PN+V ++ ++ G
Sbjct: 352 SMEERGYRLNQHIYS--VLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCR 409
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G AK + ++ G +P+ TY+ LM G+ K G +A++V EM++ G NE
Sbjct: 410 EGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFC 469
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V+I D LC G+V++A +W ++L
Sbjct: 470 YSVLI-----------------------------------DGLCGVGRVKEAMMVWSKML 494
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF----ERGSIPSLLTYNTLIAGMCESA 408
PD S++I LC G + A KL+ E E S P ++TYN L+ G+C
Sbjct: 495 TIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC-KIGNAKEGIRILEEMLDK 458
+++ A L + M+++G +P+V T N + K + +EG LEE++ +
Sbjct: 555 DVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVAR 605
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 151/329 (45%), Gaps = 36/329 (10%)
Query: 80 TYHSIIHKLARAR-AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY ++I+ L + R A D L++ ++ + ++++ +I G+ E A+ +
Sbjct: 329 TYGTLINGLVKQRRAMDGARLLISMEERG--YRLNQHIYSVLISGLFKEGKAEEAMTLWK 386
Query: 139 RIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
++ + + ++ + +++ L + N+ ++++ M + +PNV+T + L+K
Sbjct: 387 KMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSG-----CLPNVYTYSSLMKG 441
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
K E AI+V EM G N ++ ++ G G ++ A V+ +L G PD
Sbjct: 442 FFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEM---EDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
Y+ ++ G +G + A+K+ EM E+ +P+ VTY ++++ C K A +
Sbjct: 502 TVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVD 561
Query: 312 LLDDMLQRKYVPSSALCCKVIDLL------CEEGK---------------VEDACELWKR 350
LL+ ML R P C ++ L CEEG+ V AC++ +
Sbjct: 562 LLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEV 621
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+L K P + + I+ +CK KI A
Sbjct: 622 MLGKYLAPKTSTWAMIVPEICKPKKINAA 650
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 225/438 (51%), Gaps = 25/438 (5%)
Query: 18 SIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN---- 73
S G + + + PI P+ RL S++ Q++ LALQ+F +PN
Sbjct: 58 STGHRETNDTQMKTQKPISPF-------RLSSLLRLQKDPTLALQLF-----LNPNPSSS 105
Query: 74 -----FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
F ++ +Y II KL RA+ FD +E +L +LKQ E +F VI YG A
Sbjct: 106 EPPKPFRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAH 165
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
P+ A + F RI F +R+V+S+N+LL AL++N++ + + +F + + P+ T
Sbjct: 166 LPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYGS--PDACTF 223
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NILI A C D++ V DEM G+ PN+VT T++ G ++ A R+ D++
Sbjct: 224 NILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVK 283
Query: 249 RGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ P+A+ YT L+ G+ +G L A K+ +EM + V+ Y +I A K +
Sbjct: 284 VYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKE 343
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
E ++L +M + P + +I+ C+E +E A + ++ K C PD +TII
Sbjct: 344 EVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 403
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
WLCKEGK+ +A L ++ RG P +L+Y + G+CE +L EA + D+M+ KG
Sbjct: 404 GWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYV 463
Query: 427 PNVFTYNMLIQGFCKIGN 444
P + N L+ C+ N
Sbjct: 464 PRNESINKLVDRLCQECN 481
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 198/396 (50%), Gaps = 12/396 (3%)
Query: 126 LAGRPELAVKTFLRIEKFN------VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
L P LA++ FL + + S+ S + +++ L + K +D + + + + +
Sbjct: 86 LQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQET 145
Query: 180 KVVPN-VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P+ V CN+ I + + A +V + +PS + + ++L + +E
Sbjct: 146 RFAPHEVIFCNV-IAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEK 204
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+VF DI + G PDA T+ +L+ G L V DEM+ GV+PN VT+G +I
Sbjct: 205 MTQVFVDISNYG-SPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIY 263
Query: 299 AFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
K EA L +DM++ + P++++ +I C G++ A +L + ++ N
Sbjct: 264 GLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVK 323
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
+A+ ST+I L K G+ E + E E G P +TYN +I G C+ +L A R+
Sbjct: 324 LVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRV 383
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
D+MVEKG +P+VF++N +I CK G + + +LE+M +GC P+ S+ ++ +GL E
Sbjct: 384 MDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCE 443
Query: 477 SGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSD 511
E ++ G V ++S N L+ R+ +
Sbjct: 444 MMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQE 479
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 169/347 (48%), Gaps = 24/347 (6%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L++ + + + L+ Q+F + S + T++ +IH DAV + E+ Q
Sbjct: 192 LLAALLKNRQLEKMTQVFVDISNYG---SPDACTFNILIHAACLCGDLDAVWGVFDEM-Q 247
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-----FNVQRSVRSLNTLLNALVQ 161
+K F T+I YGL+ +L K LR+++ + ++ + TL+
Sbjct: 248 KRGVKPNVVTFGTLI--YGLSLNSKL--KEALRLKEDMVKVYMIKPNASIYTTLIKGFCG 303
Query: 162 ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
N + L M ++ K+V V++ LI AL K E +L EM G
Sbjct: 304 VGELNFAFKLKEEMVTSN---VKLVSAVYS--TLISALFKHGRKEEVSDILREMGENGCK 358
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+ VT+ I+ G+ D+E+A RV +++++G PD ++ ++ K G+L A+ +
Sbjct: 359 PDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDL 418
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+++M G P+ ++Y ++ + C+ + EA ++LD+M+ + YVP + K++D LC+
Sbjct: 419 LEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQ 478
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
E +E + L R N M + + + ++ ++ KE + E+ L D
Sbjct: 479 ECNMELLWMILNSLGRGNRM-NMDMWARVVAFVYKEN-LSESSNLID 523
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 20/290 (6%)
Query: 253 PDATTYTVLMDGYI--KLGRLTDAVKVMDEMED--------NGVEPNEVTYGVMIEAFCK 302
P Y++L I KLGR K+ DEME+ P+EV + +I + +
Sbjct: 108 PKPFRYSLLSYDLIISKLGR----AKMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGR 163
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A + + + + + ++ L + ++E +++ + PD
Sbjct: 164 AHLPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYGS-PDACT 222
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +IH C G + +FDE + RG P+++T+ TLI G+ +++L EA RL +DMV
Sbjct: 223 FNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMV 282
Query: 422 E-KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ ++PN Y LI+GFC +G ++ EEM+ +S LI L++ G +
Sbjct: 283 KVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRK 342
Query: 481 GEVGKVVSMATASG-SVESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
EV ++ +G ++ ++N ++ +DL+S +DE++ K C
Sbjct: 343 EEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGC 392
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 262/530 (49%), Gaps = 40/530 (7%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P ++ R+ P +L ++ ++ ++++F +AG + H +D Y+ +I KL A
Sbjct: 67 PELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGT-QKGYCHMFDVYYMLIDKLGAAG 125
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRS 151
F +++LL ++KQ I E+LFI ++++YG AG P A + L + ++ + + RS
Sbjct: 126 EFKTIDALLMQMKQE-GIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRS 184
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +L+ L+ +V +F K + P V+T +++KALC ++V+ A +L +M
Sbjct: 185 YNVVLDVLLAGNCPKVVPNVFYEMLSK-GISPTVYTFGVVMKALCLVNEVDSACALLKDM 243
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G VPN + + T++ G + ++ ++L G +PD T+ + G K+ R+
Sbjct: 244 TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 303
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD----------DMLQRKY 321
+A K++D M G PN TYGV++ C+ K EAR LL+ + L Y
Sbjct: 304 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGY 363
Query: 322 V----------------------PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
V P +I LC++G + A EL + K C P+
Sbjct: 364 VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPN 423
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I CKEG++ EA+ + DE +G + + YN LI+ +C+ ++ +A ++
Sbjct: 424 VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 483
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
DM KG +P++FT+N LI G CK+ +E + + ++ML +G N +++ LI G
Sbjct: 484 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 543
Query: 479 NEGEVGKVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGALDELLVK 525
E K+V+ G D ++N L+ + +++ G ++++ K
Sbjct: 544 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 10/410 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ N TY ++H L R D LL ++ NP + LF T+I Y GR + A
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP-NPNVV----LFNTLINGYVSRGRLDEA 372
Query: 134 VKTFLRIEKFNVQ--RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
K + +V + + NTL+ L + K Y + N PNV T IL
Sbjct: 373 -KAVMHESMLSVGCGPDIFTYNTLILGLCK-KGYLVSARELMNEMQIKGCEPNVITYTIL 430
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK+ +E A VLDEM G+ N V + ++ +++A +FGD+ +G
Sbjct: 431 IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 490
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD T+ L+ G K+ + +A+ + +M GV N +TY +I AF + EA
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 550
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L++DML R +I LC G +E L++ ++ K P+N + +I+ LC
Sbjct: 551 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 610
Query: 372 KEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G I A + D RG P ++TYN+LI G+C++ EA L+D + +G+ P+
Sbjct: 611 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAI 670
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
TYN LI CK G + +L +D G PN+ ++ +L+ + G++
Sbjct: 671 TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 720
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 2/369 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V NTL+N V R D + S P++FT N LI LCKK + A +
Sbjct: 352 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++EM G PN++T+T ++ + G +E A+ V ++ +G +A Y L+ K
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
++ DA+ + +M G +P+ T+ +I CK K EA L DML + ++
Sbjct: 472 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 531
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEF 386
+I G +++A +L +L + C D+ + +I LC+ G I + LF D
Sbjct: 532 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P+ ++ N LI G+C + + A DM+ +G+ P++ TYN LI G CK G A+
Sbjct: 592 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 651
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
E + + +++ +G P+ +++ LI + G + ++S SG + ++ +W L+
Sbjct: 652 EALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 711
Query: 506 TRIVSDLDS 514
+ + + D
Sbjct: 712 SNFIKEGDQ 720
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 83/156 (53%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LIKALC+ ++E + + ++M S G+ PN ++ ++ G G+I++A D+
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG PD TY L++G K GR +A+ + D+++ G+ P+ +TY +I CK
Sbjct: 626 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 685
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+A LL + ++P+ ++ +EG E
Sbjct: 686 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 223/407 (54%), Gaps = 9/407 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T + ++H + FD +++++E+++ P++ L R AG + A
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR----AGDVDAA 211
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + ++ + + N++L L +++R+D +F+ + + V P+V + NILI
Sbjct: 212 IALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR-TMDQCSVAPDVRSFNILIG 270
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ +V+ A++ EM + P++V+ + ++G + RG++++A ++ G VP
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVP 330
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D YT+++ G+ + G +++A++V DEM G P+ VTY ++ CK + +A LL
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLL 390
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++M +R P +I C +G E+A +L+ LLR+ PD +++I +C++
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRK 450
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + +A +L+D+ R +P+ +TY+ LI CE ++ +A D+MV+KG PN+ TY
Sbjct: 451 GDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTY 510
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
N +I+G+C+ GN K+G + L++M FP+ +F+ LI G + N
Sbjct: 511 NSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEEN 557
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 220/426 (51%), Gaps = 4/426 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ +I RA DA +L+ + N +K G + +V++ R + A + F
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMA-NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRT 252
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ +V VRS N L+ + +K +H++ V P+V + + LI ++
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY-VTPDVVSFSCLIGLFSRRG 311
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+++ A L EM +G+VP+ V +T ++GG+ G + A RV +++ G +PD TY
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYN 371
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G K RL DA K+++EME+ GV P+ T+ +I +C+ A L D +L++
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P +ID +C +G + A ELW + + +P++ S +I C++G++ +A
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
DE ++G++P++ TYN++I G C S + + + M + V P++ T+N LI G
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ K N + M + P+ +++++I G E GN + G+V SG +E
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSG-IEP 610
Query: 499 DSWNFL 504
D + ++
Sbjct: 611 DRYTYM 616
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 228/468 (48%), Gaps = 11/468 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + L+ FR ++D A+ + + TY+S++ L + R FD
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMA--NRGLKPGIVTYNSVLKGLCKHRRFDKA 246
Query: 98 ESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+ + + Q P+++ F +I + G + AVK + ++ V V S +
Sbjct: 247 KEVFRTMDQCSVAPDVRS----FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSC 302
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+ + D + + +VP+ ++I C+ + A+RV DEM
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMK-GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF 361
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G +P++VT+ T+L G + + +A+++ ++ +RG PD T+T L+ GY + G +A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+++ D + + P+ VTY +I+ C+ +A L DDM R+ +P+ +ID
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
CE+G+VEDA +++K +P+ ++II C+ G + + ++ + + ++ P
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
L+T+NTLI G + + A +++ M ++ V P+ TYNM+I GF + GN ++ R+ +
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
M D G P++ ++ LI G +GN + ++ G D +
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDKF 649
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 36/224 (16%)
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
E N T +M+ ++CK + A ++ +M +R P +ID G V+ A
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMC 405
L + + P ++++ LCK + +AK++F ++ S+ P + ++N LI G C
Sbjct: 214 LVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFC 273
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFT---------------------------------- 431
E+ EA + + +M + V P+V +
Sbjct: 274 RVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGV 333
Query: 432 -YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
Y M+I GFC+ G+ E +R+ +EM+ GC P+ +++ L+ GL
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGL 377
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEA----RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
P + ++I + + +K EA R LLD R VP+SA ++ +L G
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLD---HRVPVPASA-SNALLAVLSRAGWPHL 140
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIA 402
A E ++ +L + + + ++H CK + A + E E+ + P ++T+N LI
Sbjct: 141 AQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLID 200
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK---IGNAKEGIRILEEMLDKG 459
+ ++ A L D M +G++P + TYN +++G CK AKE R +++
Sbjct: 201 ARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQC---S 257
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGK 485
P+ SF++LI G G E K
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVK 283
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 221/416 (53%), Gaps = 15/416 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I+ + + + +LL ++++ IK ++ +I GR A
Sbjct: 211 NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNL 270
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +++ + ++ + N ++N + R+ + + + K+ P+V T ++LI AL
Sbjct: 271 FSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER-KMSPDVVTFSVLINALV 329
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A + +EM G++PN +T+ +++ G+ + ++ A+R+F + +G PD
Sbjct: 330 KEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVI 389
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+++L+DGY R+ D +K++ EM G+ N +TY +I FC+ A +LL +M
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM 449
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM------------PDNAISS 364
+ P+ C ++D LC GK++DA E++K +++K+ M PD +
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK-VMQKSKMDLDASHPFNDVEPDVQTYN 508
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I L EGK EA++L++E RG +P +TYN++I G+C+ + L EA +++D M K
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G P+V T+ LI G+CK+G +G+ + EM +G N ++ LI G + GN
Sbjct: 569 GFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGN 624
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 220/436 (50%), Gaps = 12/436 (2%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
+L S + LD A+ +F Y + P D + ++ + R D V SL +++
Sbjct: 46 KLQSGFHEIKGLDDAIDLFGYMVRSRP-LPCVID-FCKLLGVVVRMERPDVVISLHRKME 103
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL-VQNKR 164
I C F +I+ + + A+ TF +I K S+ + +TLL+ L V+++
Sbjct: 104 MR-RIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRV 162
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ +H + + PNV L+ LC++ V A+ +LD M G+ PN +T+
Sbjct: 163 SEALHFFHQICK------PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
TI+ G GD +A + + + + P+ Y+ ++DG K GR TDA + EM++
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G+ PN TY MI FC + EA+ LL +M +RK P +I+ L +EGK +
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIA 402
A EL+ +L + +P+ +++I K+ ++ A+++F +G P ++T++ LI
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G C + + + +L +M +G+ N TY LI GFC++GN + +L+EM+ G P
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCP 456
Query: 463 NKTSFSLLIEGLYESG 478
N + + L++GL +G
Sbjct: 457 NVVTCNTLLDGLCNNG 472
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 42/362 (11%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL +V+ +R D+V + + + ++ N+++ ILIK C + A+ ++ +
Sbjct: 82 LLGVVVRMERPDVVISLHRKMEMR-RIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKL 140
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P+LVT +T+L G + A F I P+ +T LM+G + GR+ +A
Sbjct: 141 GFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEA 196
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVID 333
V ++D M ++G++PN++TYG +++ CK + A NLL M + + P+ + +ID
Sbjct: 197 VALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIID 256
Query: 334 LLCEEGKVEDACELWKRLLRK---------NCM--------------------------P 358
L ++G+ DA L+ + K NCM P
Sbjct: 257 GLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSP 316
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D S +I+ L KEGK +EA++L++E RG IP+ +TYN++I G + L A R++
Sbjct: 317 DVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF 376
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M KG P+V T+++LI G+C +G+++L EM +G N +++ LI G +
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436
Query: 478 GN 479
GN
Sbjct: 437 GN 438
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 204/454 (44%), Gaps = 27/454 (5%)
Query: 57 LDLALQIFHYAGK--FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
L AL F K FHP+ T+ +++H L VE ++E C
Sbjct: 127 LPFALSTFGKITKLGFHPSLV----TFSTLLHGLC-------VEDRVSEALHFFHQICKP 175
Query: 115 NL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
N+ F T++ GR AV R+ + +Q + + T+++ + + +
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ ++ PNV + +I L K A + EM G+ PNL T+ ++ G+
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G A+R+ ++ +R PD T++VL++ +K G+ +A ++ +EM G+ PN +T
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y MI+ F K + A + M + P +ID C +V+D +L +
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS 415
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
R+ + + +T+IH C+ G + A L E G P+++T NTL+ G+C + +L
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLK 475
Query: 412 EAGRLWDDMVEK-----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+A ++ M + VEP+V TYN+LI G G E + EEM +G
Sbjct: 476 DALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
P+ +++ +I+GL + E ++ + G
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG 569
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 185/393 (47%), Gaps = 20/393 (5%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPE 131
S N TY+ +I+ + + + LL E+ K +P++ L +++ E
Sbjct: 280 SPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEE 339
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
L + R + + + N++++ + R D MF K P+V T +IL
Sbjct: 340 LYNEMLPR----GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK-GCSPDVITFSIL 394
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I C V+ +++L EM G+V N +T+TT++ G+ G++ A + +++ G
Sbjct: 395 IDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGV 454
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAF 300
P+ T L+DG G+L DA+++ M+ N VEP+ TY ++I
Sbjct: 455 CPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K EA L ++M R VP + VID LC++ ++++A +++ + K PD
Sbjct: 515 INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDV 574
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I+ CK G++ + ++F E RG + + +TY TLI G C+ + A ++ +
Sbjct: 575 VTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQE 634
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
M+ GV P+ T ++ G K ++ L
Sbjct: 635 MISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 160/361 (44%), Gaps = 24/361 (6%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
F S + T+ +I+ L + F E L E+ I + ++I + R
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP-NTITYNSMIDGFSKQNR 368
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNV 185
+ A + F + V + + L++ KR D L+H M + +V N
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRG-----LVANT 423
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T LI C+ ++ A+ +L EM S G+ PN+VT T+L G G +++A +F
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF-K 482
Query: 246 ILDRGWV------------PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
++ + + PD TY +L+ G I G+ ++A ++ +EM G+ P+ +TY
Sbjct: 483 VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITY 542
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I+ CK + EA + D M + + P +I+ C+ G+V D E++ + R
Sbjct: 543 NSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGR 602
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ + + T+IH C+ G I A +F E G P +T ++ G+ EL
Sbjct: 603 RGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 662
Query: 413 A 413
A
Sbjct: 663 A 663
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 18/302 (5%)
Query: 39 PQRLYPKRLV--SMI--FRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P+ + P + SMI F +QN LD A ++F+ S + T+ +I A+
Sbjct: 346 PRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMAT--KGCSPDVITFSILIDGYCGAKR 403
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D LL E+ + + + T+I + G A+ + V +V + N
Sbjct: 404 VDDGMKLLHEMSRRGLVA-NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCN 462
Query: 154 TLLNALVQNKRYDLVHLMFK---------NSRHKFK-VVPNVFTCNILIKALCKKDDVEG 203
TLL+ L N + MFK ++ H F V P+V T NILI L +
Sbjct: 463 TLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSE 522
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A + +EMP G+VP+ +T+ +++ G + ++ A ++F + +G+ PD T+T L++
Sbjct: 523 AEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLIN 582
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K+GR+ D ++V EM G+ N +TY +I FC+ A ++ +M+ P
Sbjct: 583 GYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYP 642
Query: 324 SS 325
+
Sbjct: 643 DT 644
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 124/254 (48%), Gaps = 6/254 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG ++ +P + L+ +++ R + + +ME + N ++ +
Sbjct: 57 LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ FC K A + + + + PS ++ LC E +V +A + ++
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI---- 172
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C P+ +T+++ LC+EG++ EA L D E G P+ +TY T++ GMC+ + A
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232
Query: 415 RLWDDMVEKG-VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L M E ++PNV Y+ +I G K G + + EM +KG PN +++ +I G
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292
Query: 474 LYESGNEGEVGKVV 487
SG E +++
Sbjct: 293 FCSSGRWSEAQRLL 306
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 201/363 (55%), Gaps = 2/363 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + N + SV L ++ + K+Y V + N F V NV++ NILI
Sbjct: 76 ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTV-VSLCNQMDLFGVTHNVYSLNILI 134
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+ + V AI VL +M +G+ P+ +T T++ G G+I+ A +F +++ RG
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD +Y+ +++G K G + A++++ +ME+ G +PN V Y +I++ CK +A +L
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDL 254
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M+ R P ++ C G + +A L+ ++ +N MP+ + ++ LCK
Sbjct: 255 LSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCK 314
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + EA+ +F+ ++G+ P+ TYN L+ G C + ++ EA ++ D MV+KG P V +
Sbjct: 315 EGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHS 374
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN+LI G+CK E +L EM +K P+ ++S L++GL + G E +
Sbjct: 375 YNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMC 434
Query: 492 ASG 494
+SG
Sbjct: 435 SSG 437
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 202/395 (51%), Gaps = 11/395 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+ TVI +G +A++ ++E+ + ++ + T++++L + N DL+ M
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ P+V T + ++ C + A + +EM ++PN VT T ++ G
Sbjct: 260 DRG-----IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCK 314
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + A+ VF + +G P+A TY LMDGY ++ +A KV+D M D G P +
Sbjct: 315 EGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHS 374
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++I +CK ++ EA++LL +M +++ P + ++ LC+ G+ ++A L+K +
Sbjct: 375 YNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMC 434
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
+PD ST++ LCK G + EA KL + I P ++ YN LI GM + +L
Sbjct: 435 SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLE 494
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A L+ + G++P + TY ++I+G K G + E + +M D G PN S++++I
Sbjct: 495 VAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVII 554
Query: 472 EGLYESGNEGEVGKVVS-MATASGSVESDSWNFLL 505
+G ++ + +++ M S +S ++ LL
Sbjct: 555 QGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 157/293 (53%), Gaps = 1/293 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+PN T IL+ LCK+ V A V + M G PN T+ ++ GY ++ A+
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+V ++D+G P +Y +L++GY K RL +A ++ EM + + P+ VTY +++
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ + EA NL +M +P ++D LC+ G +++A +L K + PD
Sbjct: 418 CQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDI 477
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ + +I + GK+ AK+LF + F G P++ TY +I G+ + EA L+
Sbjct: 478 VLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
M + G PN +YN++IQGF + ++ IR+++EM+ K + ++F +L++
Sbjct: 538 MEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 6/306 (1%)
Query: 228 GGYVWRGDI--ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
GG++ I ++A F +L P + + K + + V + ++M+ G
Sbjct: 63 GGFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFG 122
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V N + ++I C+ A ++L M + P + +I+ C EG++++A
Sbjct: 123 VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAV 182
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
L+ ++R+ PD ST+I+ LCK G A +L + E+G P+L+ Y T+I +
Sbjct: 183 GLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSL 242
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ + +A L +MV++G+ P+V TY+ ++ GFC +G+ E + EM+ + PN
Sbjct: 243 CKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNT 302
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLLTR--IVSDLDSGAGALDE 521
+F++L++GL + G E V T G+ + ++N L+ + + +D LD
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362
Query: 522 LLVKNC 527
++ K C
Sbjct: 363 MVDKGC 368
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 119/255 (46%), Gaps = 37/255 (14%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y+ +I+ + R D +SLL E+ + E+ + T+++ GRP+
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEK-ELTPDTVTYSTLMQGLCQVGRPQ-------- 424
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
E N+ + + S L P++ T + L+ LCK
Sbjct: 425 -EALNLFKEMCSSGLL---------------------------PDLMTYSTLLDGLCKHG 456
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A+++L M + P++V + ++ G G +E AK +F + G P TYT
Sbjct: 457 HLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYT 516
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++ G +K G +A ++ +MED+G PN +Y V+I+ F + + S A L+D+M+ +
Sbjct: 517 IMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGK 576
Query: 320 KYVPSSALCCKVIDL 334
++ S+ ++DL
Sbjct: 577 RFSADSSTFQMLLDL 591
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 261/530 (49%), Gaps = 40/530 (7%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P ++ R+ P +L ++ ++ ++++F +AG + H +D Y+ +I KL A
Sbjct: 85 PELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGT-QKGYCHMFDVYYMLIDKLGAAG 143
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRS 151
F ++LL ++KQ I E+LFI ++++YG AG P A + L + ++ + + RS
Sbjct: 144 EFKTTDALLMQMKQEG-IVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRS 202
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +L+ L+ +V +F K + P V+T +++KALC ++V+ A +L +M
Sbjct: 203 YNVVLDVLLAGNCPKVVPNVFYEMLSK-GISPTVYTFGVVMKALCLVNEVDSACALLKDM 261
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G VPN + + T++ G + ++ ++L G +PD T+ + G K+ R+
Sbjct: 262 TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 321
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD----------DMLQRKY 321
+A K++D M G PN TYGV++ C+ K EAR LL+ + L Y
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGY 381
Query: 322 V----------------------PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
V P +I LC++G + A EL + K C P+
Sbjct: 382 VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPN 441
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I CKEG++ EA+ + DE +G + + YN LI+ +C+ ++ +A ++
Sbjct: 442 VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 501
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
DM KG +P++FT+N LI G CK+ +E + + ++ML +G N +++ LI G
Sbjct: 502 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 561
Query: 479 NEGEVGKVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGALDELLVK 525
E K+V+ G D ++N L+ + +++ G ++++ K
Sbjct: 562 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 611
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 10/410 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ N TY ++H L R D LL ++ NP + LF T+I Y GR + A
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP-NPNVV----LFNTLINGYVSRGRLDEA 390
Query: 134 VKTFLRIEKFNVQ--RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
K + +V + + NTL+ L + K Y + N PNV T IL
Sbjct: 391 -KAVMHESMLSVGCGPDIFTYNTLILGLCK-KGYLVSARELMNEMQIKGCEPNVITYTIL 448
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK+ +E A VLDEM G+ N V + ++ +++A +FGD+ +G
Sbjct: 449 IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 508
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD T+ L+ G K+ + +A+ + +M GV N +TY +I AF + EA
Sbjct: 509 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 568
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L++DML R +I LC G +E L++ ++ K P+N + +I+ LC
Sbjct: 569 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 628
Query: 372 KEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G I A + D RG P ++TYN+LI G+C++ EA L+D + +G+ P+
Sbjct: 629 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAI 688
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
TYN LI CK G + +L +D G PN+ ++ +L+ + G++
Sbjct: 689 TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 738
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 2/369 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V NTL+N V R D + S P++FT N LI LCKK + A +
Sbjct: 370 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 429
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++EM G PN++T+T ++ + G +E A+ V ++ +G +A Y L+ K
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 489
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
++ DA+ + +M G +P+ T+ +I CK K EA L DML + ++
Sbjct: 490 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 549
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEF 386
+I G +++A +L +L + C D+ + +I LC+ G I + LF D
Sbjct: 550 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P+ ++ N LI G+C + + A DM+ +G+ P++ TYN LI G CK G A+
Sbjct: 610 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 669
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
E + + +++ +G P+ +++ LI + G + ++S SG + ++ +W L+
Sbjct: 670 EALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILV 729
Query: 506 TRIVSDLDS 514
+ + + D
Sbjct: 730 SNFIKEGDQ 738
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 83/156 (53%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LIKALC+ ++E + + ++M S G+ PN ++ ++ G G+I++A D+
Sbjct: 584 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG PD TY L++G K GR +A+ + D+++ G+ P+ +TY +I CK
Sbjct: 644 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 703
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+A LL + ++P+ ++ +EG E
Sbjct: 704 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 27/446 (6%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
+L+ + R +DLA +I Y N T + +++ L + R F+ V L++++
Sbjct: 227 KLLGGLVRTGWVDLAWEI--YGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDME 284
Query: 106 QNPEIKCGENLFI------TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
G+ +F T+I Y G E A + ++ + + N +L L
Sbjct: 285 -------GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 160 VQNKRYD-----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+ +YD L+ ++ + + PN T N L+ +C++D++ A + DEM
Sbjct: 338 CKIGKYDRAKDVLIEML------QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++P+LV+ ++++G G + A F ++ G VPD YT+L+DG+ + G L+DA
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+K+ DEM G + VTY + CK K +A L ++M++R VP +I
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPS 393
C++G ++ A L++ ++R N PD +T+I CK G++ AK+L+D+ R IP
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++Y T++ G C S L EA L D M+EKG+ PN+ T N LI+G+C+ G+ + L
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGN 479
+M+ G P+ S++ LI+G + N
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEAN 657
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 213/426 (50%), Gaps = 9/426 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++I++ L + +D + +L E+ Q P L + + R + E+
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI---- 384
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + V + S ++L+ L +N + F+ + +VP+ ILI C
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFR-EMERSGIVPDNVIYTILIDGFC 443
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A+++ DEM + G ++VT+ T L G + +A +F ++++RG VPD
Sbjct: 444 RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ GY K G + A+ + + M ++P++VTY +I+ FCK + G A+ L DDM
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P V++ C G + +A L ++L K P+ +T+I C+ G +
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A + + G IP +YNTLI G + A L +A L ++M ++G++ N+ TYN++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ GFC G +E ++L +M++ G P+ ++S LI G N E + G
Sbjct: 684 LNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Query: 496 VESDSW 501
V D +
Sbjct: 744 VPDDRF 749
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 249/546 (45%), Gaps = 92/546 (16%)
Query: 50 MIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD------------- 95
++FR + +L L L+ PNF H+ + +++H L R R
Sbjct: 106 VLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKS 165
Query: 96 ------AVESLLTE-----------------LKQNPEIKCGENLFITVIRNYGLA----- 127
VESL++ Q +++ G F ++R G++
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAF-QILRRKGVSVSINA 224
Query: 128 -----------GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
G +LA + + + + ++ +V +LN ++NAL ++++++ V +
Sbjct: 225 CNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDME 284
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K V ++ T N LI A C++ VE A ++L+ S GM P L+T+ IL G G
Sbjct: 285 GK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM--------------- 281
+ AK V ++L G P+A TY L+ + + +A ++ DEM
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 282 --------------------EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
E +G+ P+ V Y ++I+ FC+ +A + D+ML R
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
++ LC++ DA L+ ++ + +PD +T+I CK+G + +A
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 382 LFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LF+ R ++ P +TYNTLI G C++ E+ A LWDDM+ K + P+ +Y ++ GFC
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESD 499
G E + + ++ML+KG PN + + LI+G SG+ + + +S ++G + +S
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 500 SWNFLL 505
S+N L+
Sbjct: 644 SYNTLI 649
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 221/420 (52%), Gaps = 7/420 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++S+I A + F+++E +L ++ + E F + + YG A P A++ F R
Sbjct: 74 TFYSLIENYAYSSDFNSLEKVLNRMRLENRV-FSEKSFFVMFKAYGKAHLPNKAIELFYR 132
Query: 140 IE-KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN---SRHKFKVVPNVFTCNILIKAL 195
+ +F + +V+S N++LN ++Q +D L F N ++PNV + N++IK++
Sbjct: 133 MSFEFYCKPTVKSFNSVLNVIIQAGFHDRA-LEFYNHVVGAKDMNILPNVLSFNLIIKSM 191
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK V+ AI + EMP VP+ T+ T++ G I+ A + ++ G P
Sbjct: 192 CKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSP 251
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+ VL++G K G T K++D M G PNEVTY +I C K +A +LLD
Sbjct: 252 ATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDR 311
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+ K VP+ +I+ L ++G+ D + + + + + + S ++ L KEGK
Sbjct: 312 MVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGK 371
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EA +LF E ++G + + Y+ L+ G+C + EA ++ +M +KG PN FT++
Sbjct: 372 SEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSS 431
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L++GF ++GN+ + I + ++M C N+ +S+LI GL + G E V + A+G
Sbjct: 432 LMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATG 491
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 210/425 (49%), Gaps = 10/425 (2%)
Query: 58 DLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
D AL+ + H G N N +++ II + + D L E+ P KC +
Sbjct: 160 DRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREM---PVRKCVPDA 216
Query: 117 FITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ GL R + AV ++ S + N L+N L + + V + N
Sbjct: 217 YTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDN 276
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
K VPN T N LI LC K ++ A+ +LD M S VPN VT+ TI+ G V +G
Sbjct: 277 MFLK-GCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQG 335
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+ RV + +RG++ + Y+VL+ G K G+ +A+++ E D G + N V Y
Sbjct: 336 RALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYS 395
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ C+ +K EA +L +M + P++ ++ E G A E+WK + +
Sbjct: 396 ALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKI 455
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEA 413
NC + S +IH LCK+GK+ EA ++ + G P ++ Y+++I G+C++ + EA
Sbjct: 456 NCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEA 515
Query: 414 GRLWDDM--VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+L+++M +E +P+V TYN+L CK + + +L MLD+GC P+ + ++ +
Sbjct: 516 LKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL 575
Query: 472 EGLYE 476
L E
Sbjct: 576 RMLRE 580
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 5/280 (1%)
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T +++ Y + D + ++V + V ++ V+ Y K A+++ M
Sbjct: 74 TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRM 133
Query: 282 E-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK---YVPSSALCCKVIDLLCE 337
+ +P ++ ++ + A + ++ K +P+ +I +C+
Sbjct: 134 SFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK 193
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLT 396
G V++A EL++ + + C+PD T++ LCK +I EA L DE + G PS T
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+N LI G+C+ + T +L D+M KG PN TYN LI G C G + + +L+ M+
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
C PN+ ++ +I GL + G + +V+ + G +
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYI 353
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 138/324 (42%), Gaps = 27/324 (8%)
Query: 77 NYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N TY +II+ L + RA D L+ L + E ++ ++ G+ E A++
Sbjct: 320 NEVTYGTIINGLVKQGRALDGARVLV--LMEERGYIVNEYVYSVLVSGLFKEGKSEEAMR 377
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F + + + L++ L ++++ D + K PN FT + L+K
Sbjct: 378 LFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK-GCAPNAFTFSSLMKGF 436
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
+ + AI V +M + N V ++ ++ G G + A V+ +L G PD
Sbjct: 437 FEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDV 496
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEME--DNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
Y+ ++ G G + +A+K+ +EM + +P+ +TY ++ A CK A +LL
Sbjct: 497 VAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLL 556
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEE-------GKVED--------------ACELWKRLL 352
+ ML R P C + +L E+ K D A ++ + +L
Sbjct: 557 NSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVML 616
Query: 353 RKNCMPDNAISSTIIHWLCKEGKI 376
+K P + + ++H LC+ KI
Sbjct: 617 QKFLSPKASTWARVVHELCQPKKI 640
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 136/333 (40%), Gaps = 71/333 (21%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
LVS +F++ + A+++F + N Y +++ L R R D +L+E+
Sbjct: 362 LVSGLFKEGKSEEAMRLFKES--MDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTD 419
Query: 107 NPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
C N F ++++ + G A++ + + K N
Sbjct: 420 K---GCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAE----------------- 459
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
N ++LI LCK V A+ V +M + G P++V ++
Sbjct: 460 -------------------NEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYS 500
Query: 225 TILGGYVWRGDIENAKRVFGDIL--DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+++ G G +E A +++ ++L + PD TY +L + K ++ AV +++ M
Sbjct: 501 SMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSML 560
Query: 283 DNGVEPNEVTYGV---------------------MIEAFCKGKKSGEARNLLDDMLQRKY 321
D G +P+ VT + ++ K +++ A +++ MLQ+
Sbjct: 561 DRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFL 620
Query: 322 VPSSALCCKVIDLLCEEGKVE---DACELWKRL 351
P ++ +V+ LC+ K++ D C W +L
Sbjct: 621 SPKASTWARVVHELCQPKKIQAVIDKC--WSKL 651
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 222/431 (51%), Gaps = 13/431 (3%)
Query: 52 FRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
RQ++ + LAL F + F H T+ +I KLA D+V+ LL ++K
Sbjct: 50 LRQESCVPLALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG-F 107
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
C E+LFI+VI Y G E AV+ F RI++F SV+ N +L+ L+ R ++++
Sbjct: 108 HCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 167
Query: 171 MFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
++++ R F+ PNVFT N+L+KALCK + V+GA ++L EM + G P+ V++TT++
Sbjct: 168 VYRDMKRDGFE--PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ + L + P + Y L++G K A ++M EM + G+ PN
Sbjct: 226 MCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
++Y +I C + A + L ML+R P+ ++ G DA +LW
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 350 RLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
+++R + N ++ +T++ C G I +A +F E G P++ TY +LI G +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A +W+ M+ G PNV Y +++ C+ KE ++E M + C P+ +F
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 468 SLLIEGLYESG 478
+ I+GL ++G
Sbjct: 461 NAFIKGLCDAG 471
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 190/373 (50%), Gaps = 7/373 (1%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ +V S +TL+N L + + +L F K PN++T + L+K + A
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELA-FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 205 IRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+ + ++M G+ PN+V + T++ G+ G+I A VF + + G P+ TY L++
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ K G L AV + ++M +G PN V Y M+EA C+ K EA +L++ M + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKL 382
S I LC+ G+++ A ++++++ +++ P N ++ + ++ L K +I EA L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 383 FDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E F RG S TYNTL+ G C + A +L M+ G P+ T NM+I +CK
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 442 IGNAKEGIRILEEML--DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES- 498
G A+ ++L+ + + P+ S++ +I GL S + ++ ++G V S
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635
Query: 499 DSWNFLLTRIVSD 511
+W+ L+ + D
Sbjct: 636 ATWSVLINCFILD 648
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 27/446 (6%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
+L+ + R +DLA +I Y N T + +++ L + R F+ V L++++
Sbjct: 227 KLLGGLVRTGWVDLAWEI--YGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDME 284
Query: 106 QNPEIKCGENLFI------TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
G+ +F T+I Y G E A + ++ + + N +L L
Sbjct: 285 -------GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 160 VQNKRYD-----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+ +YD L+ ++ + + PN T N L+ +C++D++ A + DEM
Sbjct: 338 CKIGKYDRAKDVLIEML------QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++P+LV+ ++++G G + A F ++ G VPD YT+L+DG+ + G L+DA
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+K+ DEM G + VTY + CK K +A L ++M++R VP +I
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPS 393
C++G ++ A L++ ++R N PD +T+I CK G++ AK+L+D+ R IP
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++Y T++ G C S L EA L D M+EKG+ PN+ T N LI+G+C+ G+ + L
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGN 479
+M+ G P+ S++ LI+G + N
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEAN 657
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 213/426 (50%), Gaps = 9/426 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++I++ L + +D + +L E+ Q P L + + R + E+
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI---- 384
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + V + S ++L+ L +N + F+ + +VP+ ILI C
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFR-EMERSGIVPDNVIYTILIDGFC 443
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A+++ DEM + G ++VT+ T L G + +A +F ++++RG VPD
Sbjct: 444 RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ GY K G + A+ + + M ++P++VTY +I+ FCK + G A+ L DDM
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P V++ C G + +A L ++L K P+ +T+I C+ G +
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A + + G IP +YNTLI G + A L +A L ++M ++G++ N+ TYN++
Sbjct: 624 PKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ GFC G +E ++L +M++ G P+ ++S LI G N E + G
Sbjct: 684 LNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Query: 496 VESDSW 501
V D +
Sbjct: 744 VPDDRF 749
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 249/546 (45%), Gaps = 92/546 (16%)
Query: 50 MIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD------------- 95
++FR + +L L L+ PNF H+ + +++H L R R
Sbjct: 106 VLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKS 165
Query: 96 ------AVESLLTE-----------------LKQNPEIKCGENLFITVIRNYGLA----- 127
VESL++ Q +++ G F ++R G++
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAF-QILRRKGVSVSINA 224
Query: 128 -----------GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
G +LA + + + + ++ +V +LN ++NAL ++++++ V +
Sbjct: 225 CNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDME 284
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K V ++ T N LI A C++ VE A ++L+ S GM P L+T+ IL G G
Sbjct: 285 GK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM--------------- 281
+ AK V ++L G P+A TY L+ + + +A ++ DEM
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 282 --------------------EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
E +G+ P+ V Y ++I+ FC+ +A + D+ML R
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
++ LC++ DA L+ ++ + +PD +T+I CK+G + +A
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523
Query: 382 LFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LF+ R ++ P +TYNTLI G C++ E+ A LWDDM+ K + P+ +Y ++ GFC
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESD 499
G E + + ++ML+KG PN + + LI+G SG+ + + +S ++G + +S
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 500 SWNFLL 505
S+N L+
Sbjct: 644 SYNTLI 649
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 233/454 (51%), Gaps = 11/454 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-- 104
L++ F+ Q +DL + K + T++++I+ L + F L ++
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLT--IVTFNTLINGLCKVGKFGQAVELFDDMVA 220
Query: 105 -KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P++ + + T+I G A F ++ + Q V + +T++++L +++
Sbjct: 221 RGYQPDV----HTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR 276
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
R + +F + K + PN+FT N LI+ LC A +L+EM S+ ++PN+VT
Sbjct: 277 RVNEALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+ ++ + G++ A+ V + + G P+ TY+ LM+GY + +A K+ D M
Sbjct: 336 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMIT 395
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G +P+ +Y ++I +CK K+ GEA+ L ++M+ + P +ID LC+ G++ +
Sbjct: 396 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 455
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIA 402
A +L+K +L +PD S ++ CK+G + +A +LF + + P+++ YN LI
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 515
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
MC+S L EA +L+ ++ +G++PNV Y +I G CK G E + M + GC P
Sbjct: 516 AMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 575
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
N+ S++++I G + +E +++ G V
Sbjct: 576 NEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 176/328 (53%), Gaps = 1/328 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N LL+A+V+ + Y + + P+ +T ++LI + V+ VL ++
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G+ +VT T++ G G A +F D++ RG+ PD TYT +++G K+G
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A + +M + G +P+ VTY +I++ CK ++ EA ++ M + P+ +
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I LC + +A + ++ N MP+ S +I+ CKEG ++EA+ + E G
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+++TY++L+ G AE+ EA +L+D M+ KG +P+VF+YN+LI G+CK E +
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ EM+ +G P+ S++ LI+GL + G
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLG 451
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 189/392 (48%), Gaps = 46/392 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY +II+ L + A L ++ E C ++ + T+I + R A+ F
Sbjct: 229 TYTTIINGLCKIGETVAAAGLFRKMG---EAGCQPDVVTYSTIIDSLCKDRRVNEALDIF 285
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + ++ + N+L+ L R+ M N ++PN+ T ++LI CK
Sbjct: 286 SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAML-NEMMSLNIMPNIVTFSLLINIFCK 344
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ +V A VL M MG+ PN+VT+++++ GY + ++ A+++F ++ +G PD +
Sbjct: 345 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFS 404
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +L++GY K R+ +A ++ +EM G+ P+ V+Y +I+ C+ + EA +L +ML
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 464
Query: 318 QRKYVPSSALC---------CK----------------------------VIDLLCEEGK 340
+P LC CK +ID +C+
Sbjct: 465 TNGNLPD--LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNT 399
+++A +L+ L + P+ I +TII+ LCKEG + EA + F E G P+ +YN
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+I G + + + A +L +M EKG +V T
Sbjct: 583 IIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 239/473 (50%), Gaps = 9/473 (1%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
AL +F A + N SH+ +H I+ +LA + S + ++ + + C E++ +T
Sbjct: 29 ALSLFESASR---NKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALT 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
VI+ Y A+ TF ++ F + VRS NTLLNA V+ +D F
Sbjct: 86 VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAE-SFSRYFES 144
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V PN+ T NILIK CKK +E AI +LD M S + P++ ++ T++ G V GD+
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMI 297
A +VF ++ RG V D T Y +L+DG+ K G ++ + + +D V PN VTY +MI
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMI 264
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + E+ + + M + + +I LCE G ++ A ++K ++ + +
Sbjct: 265 NGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLV 324
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D + +++ C+ GKI E+ +L+ + + ++++YN LI G+ E+ ++ EA +W
Sbjct: 325 VDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIW 384
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ + +KG P TY +LI G CK G + ++I +E D + ++S +++GL +
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKE 444
Query: 478 GNEGEVGKVVSMATASG-SVESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
G E +V+ G ++ N L+ V S L+ E+ K C
Sbjct: 445 GRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGC 497
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 202/399 (50%), Gaps = 12/399 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+IH L A D + E+ ++ + ++ + AG+ + + + ++
Sbjct: 294 TYSSLIHGLCEAGNIDGAVRVYKEIVESSLV-VDAVTHNAMLNGFCRAGKIKESFELWMV 352
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ K N Q +V S N L+ L +N + + + L+ K P T +LI L
Sbjct: 353 MGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKG-----CRPESTTYGVLIHGL 406
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK + A+++ E + +++++ G G ++ A + + RG+ D
Sbjct: 407 CKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDP 466
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
L++G+++ +L DA+ EME G P V+Y +I+ CK ++ EA + + +
Sbjct: 467 HVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKE 526
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML++++ P C ++D LC+E K+E A LW++ L K PD + + ++H LC K
Sbjct: 527 MLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCK 586
Query: 376 IWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A +L+ +R + +P+L+T NTL+ G+ + + +A +WD +++ G+ P++ +YN+
Sbjct: 587 LEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNI 646
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
I+G C + I L + L++G P ++++L+
Sbjct: 647 TIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 182/376 (48%), Gaps = 44/376 (11%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ +V +V + N ++N L + R+D + M KN R K ++FT + LI L
Sbjct: 248 VKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK-----DMFTYSSLIHGL 302
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY-----------VW------------ 232
C+ +++GA+RV E+ +V + VTH +L G+ +W
Sbjct: 303 CEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVV 362
Query: 233 -----------RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
G +E A ++ + +G P++TTY VL+ G K GRL A+K+ E
Sbjct: 363 SYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEA 422
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
ED + + Y M++ CK + EA ++++ M +R Y +C +I+ K+
Sbjct: 423 EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKL 482
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTL 400
EDA ++ + K C P +T+I LCK + EA E E+ P ++T + L
Sbjct: 483 EDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLL 542
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G+C+ ++ A LW ++KG +P++ YN+L+ G C + ++ +++ M C
Sbjct: 543 MDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTC 602
Query: 461 FPNKTSFSLLIEGLYE 476
PN + + L+EGLY+
Sbjct: 603 VPNLVTRNTLMEGLYK 618
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 204/392 (52%), Gaps = 6/392 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + N + SV L + + K+Y V + N F V NV++ N+LI
Sbjct: 72 ALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTV-VSLCNQMDLFGVTHNVYSLNVLI 130
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+ + V+ A+ +L +M +G+ P T ++ G G I+ A +F +++ RG
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ +Y +++G K G + AV V +ME NG +P+ VTY +I++ CK + +A
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +ML R P+ ++ C G++ +A L+K ++ ++ MPD + ++ LCK
Sbjct: 251 LSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK 310
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + EA+ +F+ E+G P++ TYN L+ G C + EA ++++ M+ +G P V +
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN+LI GFCK E +L EM K P+ ++S L++GL + G E +
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMC 430
Query: 492 ASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
+ G + N + I+ D G LDE L
Sbjct: 431 SYGLLP----NLVTYSILLDGFCKHGHLDEAL 458
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 227/455 (49%), Gaps = 6/455 (1%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
+HN + + +I+ L R D S+L ++ + I + F +I G+ + AV
Sbjct: 120 THNVYSLNVLINCLCRLNHVDFAVSILGKMFK-LGIHPTASTFNALINGLCNEGKIKEAV 178
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F + + + +V S NT++N L + + +FK P+V T N +I +
Sbjct: 179 ELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN-GCKPDVVTYNTIIDS 237
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK V A+ L EM G+ PN+ T+ ++ G+ G + A R+F +++ R +PD
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T T+L+DG K G +++A V + M + GVEPN TY +++ +C + EA+ + +
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M+++ P +I+ C+ ++++A L + K PD ST++ LC+ G
Sbjct: 358 IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG 417
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ EA +F E G +P+L+TY+ L+ G C+ L EA +L M EK +EPN+ +
Sbjct: 418 RPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHT 477
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+LI+G G + + ++ G P +++++I+GL + G E +
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 537
Query: 494 GSV-ESDSWNFLLTRIVSDLDSGAGA--LDELLVK 525
G + S S+N ++ + + DS +DE++ K
Sbjct: 538 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 572
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 216/447 (48%), Gaps = 15/447 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ + R ++D A+ I K HP S T++++I+ L L E+
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTAS----TFNALINGLCNEGKIKEAVELFNEM 184
Query: 105 ---KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
P + + T+I G +AV F ++E+ + V + NT++++L +
Sbjct: 185 VRRGHEPNVIS----YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCK 240
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
++ + + F + + PNVFT N ++ C + A R+ EM ++P+ V
Sbjct: 241 DRLVNDA-MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTV 299
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T T ++ G G + A+ VF + ++G P+ +TY LMDGY + +A KV + M
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G P +Y ++I FCK ++ EA++LL +M + P + ++ LC+ G+
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
++A ++K + +P+ S ++ CK G + EA KL + + P+++ + L
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I GM + +L A L+ + G+ P + TY ++I+G K G + E + +M D G
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVV 487
PN S++++I+G ++ + +++
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLI 566
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 43/258 (16%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y+ +I+ ++R D +SLL E+ NP+ + T+++ GRP+ A+
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVT----YSTLMQGLCQFGRPKEALNI 425
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + +PN+ T +IL+ C
Sbjct: 426 FKEMCSYGL------------------------------------LPNLVTYSILLDGFC 449
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A+++L M + PN+V HT ++ G G +E AK +F + G P
Sbjct: 450 KHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIR 509
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYTV++ G +K G +A + +MED+G PN +Y VMI+ F + + S A L+D+M
Sbjct: 510 TYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 569
Query: 317 LQRKYVPSSALCCKVIDL 334
+ +++ + + ++DL
Sbjct: 570 VGKRFSANLSTFQMLLDL 587
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 198/369 (53%), Gaps = 1/369 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++R GR E AV + + + NTL+ A + D + R +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
PN+ T N ++ LCK +EGA +V DEM G+ P++V++ T+L GY G + +
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
VF ++ RG VPD T+T L+ K G L AV ++ +M + G+ NEVT+ +I+
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FCK +A +++M + PS +I+ C+ G+++ A EL + + K PD
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
STII CK G + A +L + ++G +P +TY++LI G+CE L +A L++
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ GV+P+ FTY LI G CK GN ++ + + +EM+ KG P+ ++S+LI GL +S
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517
Query: 479 NEGEVGKVV 487
E +++
Sbjct: 518 RTKEAHRLL 526
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 208/419 (49%), Gaps = 17/419 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++++ RA D E +++ +++ K F +++ AGR E A K
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + V S NTLL+ + +F + +VP+V T LI A C
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDVVTFTSLIHATC 304
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++E A+ ++ +M G+ N VT T ++ G+ +G +++A ++ G P
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++GY KLGR+ A +++ EME V+P+ VTY +I +CK A L M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L++ +P + +I LCEE ++ DACEL++ +L+ PD +T+I CKEG +
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN-- 433
+A L DE R G +P ++TY+ LI G+ +SA EA RL + + P+ Y+
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544
Query: 434 -------------MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L++GFC G KE ++ + MLD+ + + +S+LI G GN
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 183/362 (50%), Gaps = 4/362 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +IR+Y RP LA SV + N +L AL + R
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H V PNV+T NIL++ALC + +E A+ V+ +M G PN VT+ T++ + G++
Sbjct: 146 HG--VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 237 ENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A+RV + + G P+ T+ +++G K GR+ A KV DEM G+ P+ V+Y
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ +CK E+ + +M QR VP +I C+ G +E A L ++ +
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
+ + +I CK+G + +A +E + I PS++ YN LI G C+ + A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +M K V+P+V TY+ +I G+CK+GN ++ ++ML KG P+ ++S LI GL
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 475 YE 476
E
Sbjct: 444 CE 445
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 4/235 (1%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ Y L R + A + G P+ Y ++ A AR L ML
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLP-SARRFLSSML 144
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P+ ++ LC G++E+A + + C P+ +T++ C+ G++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 378 EAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A+++ E + P+L+T+N+++ G+C++ + A +++D+MV +G+ P+V +YN L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSM 489
+ G+CK+G E + + EM +G P+ +F+ LI ++GN E V V M
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G PS+ YN ++ + + A L A R M+ GV PNV+TYN+L++ C G +E
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+ ++ +M GC PN +++ L+ +G +VVS+ G+ + + F
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTF 226
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 227/424 (53%), Gaps = 9/424 (2%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGL 126
F N N T + ++H +A FD V+++++E+++ P++ + R
Sbjct: 148 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR---- 203
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG E A+ + ++ + + N++L L ++ +D +FK F V P+V
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVR 262
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ ILI C+ ++E A+++ EM G+ P+LV+ + ++G + RG +++A ++
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G VPD YT+++ G+ + G ++DA++V DEM G P+ VTY ++ CK ++
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A LL++M +R P +I C EGK++ A +L+ +L + PD +T+
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442
Query: 367 IHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I +C++G + +A L+D+ R P+ +TY+ LI CE ++ +A D+M+ KG+
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 502
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
PN+ TYN +I+G+C+ GN +G + L++M+ P+ +++ LI G + + K
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 562
Query: 486 VVSM 489
+++M
Sbjct: 563 LLNM 566
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 215/418 (51%), Gaps = 4/418 (0%)
Query: 89 ARARAFDAVESL-LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
AR RA DA ++ L + + +K G + +V++ +G + A + F ++ F V
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
VRS L+ + + ++K RH+ + P++ + + LI ++ ++ A+
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHR-GIKPDLVSFSCLIGLFARRGKMDHAMAY 318
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L EM G+VP+ V +T ++GG+ G + +A RV +++ G +PD TY L++G K
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
RL DA +++EM + GV P+ T+ +I +C K +A L D ML ++ P
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF- 386
+ID +C +G ++ A +LW + + P++ S +I C++G++ +A DE
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G +P+++TYN++I G C S +++ + M+ V P++ TYN LI G+ K
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
+ ++L M + P+ ++++LI G GN E G + A G +E D + ++
Sbjct: 559 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG-IEPDRYTYM 615
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 214/426 (50%), Gaps = 9/426 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S++ L R+ +D + E+ P+++ F +I + G E A+K
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS----FTILIGGFCRVGEIEEALKI 283
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + ++ + S + L+ + + D + R F +VP+ ++I C
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC-FGLVPDGVIYTMVIGGFC 342
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A+RV DEM G +P++VT+ T+L G + +A+ + ++ +RG PD
Sbjct: 343 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 402
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ GY G+L A+++ D M + + P+ VTY +I+ C+ +A +L DDM
Sbjct: 403 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 462
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R+ P+ +ID CE+G+VEDA ++ K +P+ ++II C+ G +
Sbjct: 463 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 522
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ +K + + P L+TYNTLI G + ++ +A +L + M ++ V+P+V TYNML
Sbjct: 523 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 582
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I GF GN +E I E+M KG P++ ++ +I G +GN E ++ G
Sbjct: 583 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGF 642
Query: 496 VESDSW 501
D +
Sbjct: 643 APDDKF 648
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 190/417 (45%), Gaps = 38/417 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ R ++ AL+I Y H + ++ +I AR D + L E++
Sbjct: 267 LIGGFCRVGEIEEALKI--YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 324
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ G ++ VI + AG A++ + V + NTLLN L + +R
Sbjct: 325 FGLVPDGV-IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ R + V P++ T LI C + ++ A+++ D M + + P++VT+ T+
Sbjct: 384 DAEGLLNEMRER-GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G +GD++ A ++ D+ R P+ TY++L+D + + G++ DA +DEM + G+
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 502
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN +TY +I+ +C+ + + L M+ K P +I +E K+ DA +
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 562
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE 406
L + ++ PD ++TYN LI G
Sbjct: 563 LLNMMEKEKVQPD----------------------------------VVTYNMLINGFSV 588
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ EAG +++ M KG+EP+ +TY +I G GN+KE ++ +EML +G P+
Sbjct: 589 HGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P + ++I + + +K EA +L + +A ++ L G A +
Sbjct: 84 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 143
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCE 406
++ + N + + ++H CK + + + E E R P ++T+N ++
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + A L D MV KG++P + TYN +++G C+ G + + +EM D G P+ S
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 263
Query: 467 FSLLIEGLYESGNEGEVGKV 486
F++LI G G E K+
Sbjct: 264 FTILIGGFCRVGEIEEALKI 283
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 232/444 (52%), Gaps = 12/444 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
W + + P + +I ++++ AL IF A + N F H+ +T+ +I KL A F
Sbjct: 38 WAKTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRL 97
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E+LL +K+ +I E++ +++ R YG +P +++ F +++ F+ + + +S ++L
Sbjct: 98 AETLLDRMKEE-KIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVL 156
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPSMG 215
LV+ + +++ R K + P V + N+LIKA CK ++ A+ + M + G
Sbjct: 157 AILVEENQLKSAFRFYRDMR-KMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHG 215
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P+ T+ T++ G I AK + ++ +G P TYT ++ G +L + +A+
Sbjct: 216 CEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAM 275
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+++++M+D +EPN TY +++ FCK S AR++L+ M+Q++ P+ +++ L
Sbjct: 276 RLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGL 335
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP--- 392
C EGK+ +A E++ R+ + PD + I++ LC + EA DE I
Sbjct: 336 CNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNR 395
Query: 393 -----SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+ T+N +I G+C A +L+ ++ +G+ V T+N L++ FC + +
Sbjct: 396 ITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPK 455
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
RIL+EM+ GC P +S ++
Sbjct: 456 TSRILDEMVINGCIPQGEMWSTMV 479
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 125/228 (54%), Gaps = 5/228 (2%)
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
Y ++ + D+++V +M+D +P E +Y ++ + + A DM + P
Sbjct: 123 AYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPP 182
Query: 324 SSALCCKVIDLLCE-EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+ +I C+ G ++ A L++ + C PD+ T+I+ LC+ I EAK+L
Sbjct: 183 TVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKEL 242
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E E +G PS++TY ++I G+C+ + EA RL +DM +K +EPNVFTY+ L+ GFCK
Sbjct: 243 LQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCK 302
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G++ ILE M+ K PN S+S L+ GL NEG++ + + +
Sbjct: 303 TGHSSRARDILELMIQKRLRPNMISYSTLLNGL---CNEGKINEALEI 347
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 157/371 (42%), Gaps = 82/371 (22%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+IRV +M P ++ ++L V +++A R + D+ G P T+ VL+
Sbjct: 133 SIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIK 192
Query: 264 GYIK-LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ K G + A+ + M ++G EP+ TYG +I C+ + EA+
Sbjct: 193 AFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAK------------ 240
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
EL + + K C P ++IIH LC+ + EA +L
Sbjct: 241 -----------------------ELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRL 277
Query: 383 FDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
++ + +I P++ TY++L+ G C++ + A + + M++K + PN+ +Y+ L+ G C
Sbjct: 278 LEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCN 337
Query: 442 IGNAKEGIRI-----------------------------------LEEMLDKGCFPNKTS 466
G E + I L+EM+ G PN+ +
Sbjct: 338 EGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRIT 397
Query: 467 FSL-------LIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLLTRIVS--DLDSGA 516
+SL +I GL N ++ +S+ T S+ D++N LL + DL +
Sbjct: 398 WSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTS 457
Query: 517 GALDELLVKNC 527
LDE+++ C
Sbjct: 458 RILDEMVINGC 468
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV + ++++ L Q D + ++ + K + PNVFT + L+ CK A +
Sbjct: 254 SVVTYTSIIHGLCQLNNVDEAMRLLEDMKDK-NIEPNVFTYSSLMDGFCKTGHSSRARDI 312
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L+ M + PN+++++T+L G G I A +F + +G+ PDA Y +++
Sbjct: 313 LELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCD 372
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGV-------------------------------- 295
+ R +A +DEM G++PN +T+ +
Sbjct: 373 VSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRG 432
Query: 296 ----------MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+++ FC K + +LD+M+ +P + +++ C+E K DA
Sbjct: 433 ISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAM 492
Query: 346 ELWK 349
+L +
Sbjct: 493 KLLQ 496
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY SIIH L + D LL ++K + I+ + +++ + G A
Sbjct: 257 TYTSIIHGLCQLNNVDEAMRLLEDMK-DKNIEPNVFTYSSLMDGFCKTGHSSRARDILEL 315
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR-HKFKVVPNVFTCNILIKALCKK 198
+ + ++ ++ S +TLLN L + + +F + FK P+ ++ LC
Sbjct: 316 MIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFK--PDAGLYGKIVNCLCDV 373
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVT-------HTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ A LDEM G+ PN +T H ++ G + A +++ +L RG
Sbjct: 374 SRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGI 433
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
T+ L+ + L +++DEM NG P + M+ FC +K+ +A
Sbjct: 434 SITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMK 493
Query: 312 LL 313
LL
Sbjct: 494 LL 495
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 251/486 (51%), Gaps = 11/486 (2%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
++L++ + Q + D AL++ + A +F+ + Y II KL A D ++ L+ E+
Sbjct: 42 EQLLTALREQPDPDAALRMLN-AALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEM 100
Query: 105 K-QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK--FNVQRSVRSLNTLLNALVQ 161
+ + ++K G + + + +Y + AV L + F +Q N LLN LV+
Sbjct: 101 RREGHQVKLG--VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVE 158
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ L+ ++ + + P+V T N L+KALC+ V A+ +L+EM S G+ P+
Sbjct: 159 GSKMKLLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET 217
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T TT++ G+V G IE A RV +L+ G T VL++GY KLGR+ DA+ + +
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+G EP+++TY + C+ G A ++D M+Q + P V++ LC+ G++
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
E+A + +++ + C+PD +T+I LC ++ EA L + +G P + T+N L
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ + A RL+++M G P+ TYN LI C +G + + +L++M GC
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAG 517
+ +++ +I+GL + E +V G S + ++N L+ + D +D G
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517
Query: 518 ALDELL 523
+++++
Sbjct: 518 LINQMI 523
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 5/401 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+++++ L RA +L E+ + E F T+++ + G E A++ R
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAALRVKAR 241
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + ++N L+N + R D + + + F+ P+ T N + LC+
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE--PDQITYNTFVNGLCQN 299
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D V A++V+D M G P++ T+ ++ G +E AK + ++DRG +PD TT+
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ RL +A+ + ++ GV P+ T+ ++I A CK A L ++M
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC GK+ A +L K + C +TII LCK+ +I E
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++FD+ + +G + +T+NTLI G+C+ ++ +A L + M+ +G++PN TYN ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILT 539
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CK G+ K+ ILE M G + ++ LI GL ++G
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + NTL+ AL R + + + K V P+V+T NILI ALCK D A+R+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EM + G P+ VT+ T++ G + A + D+ G TY ++DG K
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
R+ +A +V D+M+ G+ N +T+ +I+ CK KK +A L++ M+ P++
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITY 534
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
++ C++G ++ A ++ + + D T+I+ LCK G+ A K+
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA-K 446
+G P+ YN ++ + + +A L+ +M E G P+ TY ++ +G C+ G K
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 654
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + EM+DKG P +SF +L EGL G
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 195/392 (49%), Gaps = 6/392 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S N LL ++ + K+Y V N F + P+V+T NILI
Sbjct: 51 ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTV-FSLSNQMDSFGIPPDVYTLNILI 109
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + A VL ++ +G+ P+ T TT++ G G I +A +F ++ G+
Sbjct: 110 NSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 169
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G A++++ ME +P+ V Y +I++ CK ++ EA NL
Sbjct: 170 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 229
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M+ + P +I LC + + L +++ MPD I ST++ LCK
Sbjct: 230 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 289
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGKI EA + D RG P+++TYN L+ G C +E+ EA +++D MV G PNV +
Sbjct: 290 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 349
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN LI G+CKI + + EEM K PN +++ L+ GL G + +
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV 409
Query: 492 ASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
A G + + RI+ D LDE +
Sbjct: 410 AHGQIP----DLATYRILLDYLCKKSHLDEAM 437
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 199/394 (50%), Gaps = 2/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q V +++++L ++++ +F +
Sbjct: 177 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 236
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P++FT LI +LC + + +L++M + ++P++V +T++ G I
Sbjct: 237 -GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 295
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V ++ RG P+ TY LMDG+ + +AVKV D M NG PN ++Y +I
Sbjct: 296 AHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLIN 355
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK ++ +A L ++M Q++ +P++ ++ LC G+++DA L+ ++ +P
Sbjct: 356 GYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP 415
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D A ++ +LCK+ + EA L E ++ P + Y +I GMC + EL A ++
Sbjct: 416 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 475
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG+ PNV TY ++I G C+ G E ++ EM GC P+ +++ + +GL ++
Sbjct: 476 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 535
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ A G S LL ++ D
Sbjct: 536 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 569
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 213/419 (50%), Gaps = 9/419 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRP 130
F N TY ++I+ L + +A LL ++Q P++ ++ ++I + +
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV----VYTSIIDSLCKDRQV 223
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
A F ++ + + + +L+++L + V + N K++P+V +
Sbjct: 224 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL-NQMINSKIMPDVVIFST 282
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ ALCK+ + A V+D M G+ PN+VT+ ++ G+ + +++ A +VF ++ G
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ P+ +Y L++GY K+ R+ A + +EM + PN VTY ++ C + +A
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L +M+ +P A ++D LC++ +++A L K + N PD I + +I +
Sbjct: 403 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 462
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G++ A+ +F +G P++ TY +I G+C L EA +L+ +M G P+
Sbjct: 463 CRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDG 522
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
TYN + QG + A I++L+EML +G + ++ +LL+E L + + V +++S
Sbjct: 523 CTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILS 581
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 144/293 (49%), Gaps = 6/293 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P + L+ K + + ++M+ G+ P+ T +
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + G A ++L +L+ P +A +I LC EGK+ DA L+ +++ +
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P+ T+I+ LCK G A +L E+G+ P ++ Y ++I +C+ ++TEA
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ MV +G+ P++FTY LI C + K +L +M++ P+ FS +++ L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287
Query: 475 YESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGAGALDELL 523
+ G E VV M G VE + ++N L+ + S++D D ++
Sbjct: 288 CKEGKITEAHDVVDMMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 339
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AVK F + +V S NTL+N + +R D +F+ K +++PN T N L+
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK-ELIPNTVTYNTLM 389
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC ++ AI + EM + G +P+L T+ +L + ++ A + I
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 449
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD YT+++DG + G L A + + G+ PN TY +MI C+ EA L
Sbjct: 450 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M P + L + + A +L + +L + D + ++ ++ LC
Sbjct: 510 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 569
Query: 373 EGKIWEAKKLFDEF 386
+ K++ EF
Sbjct: 570 DKLDQSVKQILSEF 583
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q +D A+++F H ++ N +Y+++I+ + + D L E+ Q E+
Sbjct: 325 QSEMDEAVKVFDTM--VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK-ELIPN 381
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T++ GR + A+ F + + + LL+ L + D + K
Sbjct: 382 TVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK 441
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ P++ I+I +C+ ++E A + + S G+ PN+ T+T ++ G R
Sbjct: 442 TIEGS-NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRR 500
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ A ++F ++ G PD TY + G ++ A++++ EM G + T
Sbjct: 501 GLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTT 560
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQ 318
+++E C K + +L + +Q
Sbjct: 561 TLLVEMLCDDKLDQSVKQILSEFVQ 585
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 198/369 (53%), Gaps = 1/369 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++R GR E AV + + + NTL+ A + D + R +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
PN+ T N ++ LCK +EGA +V DEM G+ P++V++ T+L GY G + +
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
VF ++ RG VPD T+T L+ K G L AV ++ +M + G+ NEVT+ +I+
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FCK +A +++M + PS +I+ C+ G+++ A EL + + K PD
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
STII CK G + A +L + ++G +P +TY++LI G+CE L +A L++
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ GV+P+ FTY LI G CK GN ++ + + +EM+ KG P+ ++S+LI GL +S
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517
Query: 479 NEGEVGKVV 487
E +++
Sbjct: 518 RTKEAHRLL 526
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 208/419 (49%), Gaps = 17/419 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++++ RA D E +++ +++ K F +++ AGR E A K
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + V S NTLL+ + +F + +VP+V T LI A C
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDVVTFTSLIHATC 304
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++E A+ ++ +M G+ N VT T ++ G+ +G +++A ++ G P
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++GY KLGR+ A +++ EME V+P+ VTY +I +CK A L M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L++ +P + +I LCEE ++ DACEL++ +L+ PD +T+I CKEG +
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN-- 433
+A L DE R G +P ++TY+ LI G+ +SA EA RL + + P+ Y+
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544
Query: 434 -------------MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L++GFC G KE ++ + MLD+ + + +S+LI G GN
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 183/362 (50%), Gaps = 4/362 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +IR+Y RP LA SV + N +L AL + R
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H V PNV+T NIL++ALC + +E A+ V+ +M G PN VT+ T++ + G++
Sbjct: 146 HG--VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 237 ENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A+RV + + G P+ T+ +++G K GR+ A KV DEM G+ P+ V+Y
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ +CK E+ + +M QR VP +I C+ G +E A L ++ +
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
+ + +I CK+G + +A +E + I PS++ YN LI G C+ + A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +M K V+P+V TY+ +I G+CK+GN ++ ++ML KG P+ ++S LI GL
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 475 YE 476
E
Sbjct: 444 CE 445
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 155/350 (44%), Gaps = 52/350 (14%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ S+IH +A + +L+ ++++ ++ E F +I + G + A+
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERG-LRMNEVTFTALIDGFCKKGFLDDALLAVEE 353
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K +Q SV N L+N + R DL + + K +V P+V T + +I CK
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK-RVKPDVVTYSTIISGYCKVG 412
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+++ A ++ +M G++P+ +T+++++ G + +A +F ++L G PD TYT
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 472
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG+ K G + A+ + DEM GV P+ VTY V+I K ++ EA LL +
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE 532
Query: 320 KYVPSS------ALCCK------VIDLL-------------------------------- 335
VP + LCC V+ LL
Sbjct: 533 DPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYS 592
Query: 336 ------CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
C G V A K++LR P++ + +++ L +EG + EA
Sbjct: 593 ILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 4/235 (1%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ Y L R + A + G P+ Y ++ A AR L ML
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLP-SARRFLSSML 144
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P+ ++ LC G++E+A + + C P+ +T++ C+ G++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 378 EAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A+++ E + P+L+T+N+++ G+C++ + A +++D+MV +G+ P+V +YN L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSM 489
+ G+CK+G E + + EM +G P+ +F+ LI ++GN E V V M
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 17/309 (5%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+++I+ + D L+ E++ +K + T+I Y G + A + ++
Sbjct: 366 YNALINGYCKLGRMDLARELIREMEAK-RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
K V + ++L+ L + KR + +F+N + V P+ FT LI CK+ +
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML-QLGVQPDEFTYTTLIDGHCKEGN 483
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
VE A+ + DEM G++P++VT++ ++ G + A R+ + VPD Y
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543
Query: 261 LM---------------DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
LM G+ G + +A KV M D + + Y ++I C+G
Sbjct: 544 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+A + ML+ + P+S ++ L EEG V +A + LL + D S
Sbjct: 604 VRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKA 663
Query: 366 IIHWLCKEG 374
+I KEG
Sbjct: 664 LIDLNRKEG 672
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y PS V+ L + + A +LR P+ + ++ LC G++ EA
Sbjct: 114 YAPSVPAYNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEPNVFTYNMLIQG 438
+ + G P+ +TYNTL+A C + EL A R+ M E+G +PN+ T+N ++ G
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK G + ++ +EM+ +G P+ S++ L+ G + G E V S T G V
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G PS+ YN ++ + + A L A R M+ GV PNV+TYN+L++ C G +E
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+ ++ +M GC PN +++ L+ +G +VVS+ G+ + + F
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTF 226
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 227/424 (53%), Gaps = 9/424 (2%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGL 126
F N N T + ++H +A FD V+++++E+++ P++ + R
Sbjct: 87 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR---- 142
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG E A+ + ++ + + N++L L ++ +D +FK F V P+V
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK-EMDDFGVAPDVR 201
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ ILI C+ ++E A+++ EM G+ P+LV+ + ++G + RG +++A ++
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G VPD YT+++ G+ + G ++DA++V DEM G P+ VTY ++ CK ++
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A LL++M +R P +I C EGK++ A +L+ +L + PD +T+
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381
Query: 367 IHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I +C++G + +A L+D+ R P+ +TY+ LI CE ++ +A D+M+ KG+
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 441
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
PN+ TYN +I+G+C+ GN +G + L++M+ P+ +++ LI G + + K
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 501
Query: 486 VVSM 489
+++M
Sbjct: 502 LLNM 505
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 215/418 (51%), Gaps = 4/418 (0%)
Query: 89 ARARAFDAVESL-LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
AR RA DA ++ L + + +K G + +V++ +G + A + F ++ F V
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
VRS L+ + + ++K RH+ + P++ + + LI ++ ++ A+
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHR-GIKPDLVSFSCLIGLFARRGKMDHAMAY 257
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L EM G+VP+ V +T ++GG+ G + +A RV +++ G +PD TY L++G K
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
RL DA +++EM + GV P+ T+ +I +C K +A L D ML ++ P
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF- 386
+ID +C +G ++ A +LW + + P++ S +I C++G++ +A DE
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G +P+++TYN++I G C S +++ + M+ V P++ TYN LI G+ K
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
+ ++L M + P+ ++++LI G GN E G + A G +E D + ++
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG-IEPDRYTYM 554
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 209/408 (51%), Gaps = 9/408 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S++ L R+ +D + E+ P+++ F +I + G E A+K
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS----FTILIGGFCRVGEIEEALKI 222
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + ++ + S + L+ + + D + R F +VP+ ++I C
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC-FGLVPDGVIYTMVIGGFC 281
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A+RV DEM G +P++VT+ T+L G + +A+ + ++ +RG PD
Sbjct: 282 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 341
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ GY G+L A+++ D M + + P+ VTY +I+ C+ +A +L DDM
Sbjct: 342 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 401
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R+ P+ +ID CE+G+VEDA ++ K +P+ ++II C+ G +
Sbjct: 402 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ +K + + P L+TYNTLI G + ++ +A +L + M ++ V+P+V TYNML
Sbjct: 462 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 521
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
I GF GN +E I E+M KG P++ ++ +I G +GN E
Sbjct: 522 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 569
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 188/413 (45%), Gaps = 38/413 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ R ++ AL+I Y H + ++ +I AR D + L E++
Sbjct: 206 LIGGFCRVGEIEEALKI--YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 263
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ G ++ VI + AG A++ + V + NTLLN L + +R
Sbjct: 264 FGLVPDGV-IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ R + V P++ T LI C + ++ A+++ D M + + P++VT+ T+
Sbjct: 323 DAEGLLNEMRER-GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G +GD++ A ++ D+ R P+ TY++L+D + + G++ DA +DEM + G+
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 441
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN +TY +I+ +C+ + + L M+ K P +I +E K+ DA +
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 501
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE 406
L + ++ PD ++TYN LI G
Sbjct: 502 LLNMMEKEKVQPD----------------------------------VVTYNMLINGFSV 527
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ EAG +++ M KG+EP+ +TY +I G GN+KE ++ +EML +G
Sbjct: 528 HGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P + ++I + + +K EA +L + +A ++ L G A +
Sbjct: 23 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCE 406
++ + N + + ++H CK + + + E E R P ++T+N ++
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + A L D MV KG++P + TYN +++G C+ G + + +EM D G P+ S
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202
Query: 467 FSLLIEGLYESGNEGEVGKV 486
F++LI G G E K+
Sbjct: 203 FTILIGGFCRVGEIEEALKI 222
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 223/431 (51%), Gaps = 13/431 (3%)
Query: 52 FRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
RQ++ + LAL F + F H T+ +I KLA D+V+ LL ++K
Sbjct: 49 LRQESCVPLALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG-F 106
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
C E+LFI+VI Y G E AV+ F RI++F SV+ N +L+ L+ R ++++
Sbjct: 107 HCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 166
Query: 171 MFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
++++ R F+ PNVFT N+L+KALCK + V+GA ++L EM + G PN V++TT++
Sbjct: 167 VYRDMKRDGFE--PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISS 224
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ ++ L + P + Y L++G K V++M EM + G+ PN
Sbjct: 225 MCEVGMVKEGRQ-----LAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPN 279
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
++Y +I + A +LL ML+R P+ ++ G DA ++W
Sbjct: 280 VISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWN 339
Query: 350 RLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
+++R + N ++ +T++ C G I +A +F E G P++ TY +LI G +
Sbjct: 340 QMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKR 399
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A +W+ M+ G PNV Y +++ C+ KE ++E M + C P+ +F
Sbjct: 400 GSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 459
Query: 468 SLLIEGLYESG 478
+ I+GL ++G
Sbjct: 460 NAFIKGLCDAG 470
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 164/316 (51%), Gaps = 12/316 (3%)
Query: 145 VQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ +V S +TL+N L + + + L+ M K H PN+ T + L+K +
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCH-----PNIHTLSSLVKGCFVRGT 330
Query: 201 VEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+ + ++M G+ PN+V + T++ G+ G+I+ A VF + + G P+ TY
Sbjct: 331 TFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYG 390
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G+ K G L AV + ++M +G PN V Y M+EA C+ K EA +L++ M +
Sbjct: 391 SLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKE 450
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIHWLCKEGKIWE 378
PS I LC+ G+++ A ++++++ ++ C P+ + ++ L K +I E
Sbjct: 451 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEE 510
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L E F RG S TYNTL+ G C + A +L M+ G P+ T NM+I
Sbjct: 511 AYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIIL 570
Query: 438 GFCKIGNAKEGIRILE 453
+CK G A+ +++L+
Sbjct: 571 AYCKQGKAERAVQMLD 586
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 35/338 (10%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
FK P F ++I+ L V+ +L +M G + +++ Y G E
Sbjct: 71 FKHTPLTF--EVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAER 128
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F I + G P Y ++D + R+ V +M+ +G EPN TY V+++
Sbjct: 129 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 188
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR-------- 350
A CK K A+ LL +M + P++ VI +CE G V++ +L +R
Sbjct: 189 ALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVY 248
Query: 351 ----------------------LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FE 387
++ K P+ ST+I+ L G+I A L + +
Sbjct: 249 NALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLK 308
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK-GVEPNVFTYNMLIQGFCKIGNAK 446
RG P++ T ++L+ G +A +W+ M+ G++PNV YN L+QGFC GN
Sbjct: 309 RGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNID 368
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEV 483
+ + + M + GC PN ++ LI G + G+ EG V
Sbjct: 369 KAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAV 406
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 258/523 (49%), Gaps = 40/523 (7%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
++ P +L ++ +++ +++IF +AG + H++ Y+ +I KL A F ++
Sbjct: 67 NKITPFQLCKLLELPLDVETSMEIFKWAGA-QKGYCHSFSVYYLLIDKLGAAAGFKVIDR 125
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNA 158
LL ++K+ I E+LFI +++ YG AG P A + L ++ + + S RS N +L+
Sbjct: 126 LLLQMKEEG-IVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV 184
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
LV + +F + K V PN +T +++KALC ++V+ A +L +M G VP
Sbjct: 185 LVVGNCPSVASNVFYDMLSK-GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVP 243
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N + + T++ R ++ A ++ ++ G PD T+ ++ G+ +L R+ + K++
Sbjct: 244 NSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLV 303
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL------------------------- 313
D M G PN++TYG ++ CK + EA+ LL
Sbjct: 304 DRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLN 363
Query: 314 -------DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
D M+ YVP +++ LC++G A EL + K C P+ + +
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTIL 423
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I CK+G++ EA + E +G + + YN LI+ +C+ ++ EA ++ +M KG
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+P++FT+N LI G C++ ++ + + +M+ +G N +F+ LI G E K
Sbjct: 484 KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543
Query: 486 VVS-MATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVK 525
+V+ M ++ ++N L+ + ++ G G +E++ K
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK 586
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 183/360 (50%), Gaps = 2/360 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V NTL+N V+N R + + VP+VFT + L+ LCKK A+ +
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
+++M + G PNL T+T ++ G+ +G +E A + ++L +G+ + Y L+ K
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCK 464
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G++ +A+ + EM G +P+ T+ +I C+ + +A L DM+ + +S
Sbjct: 465 HGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVT 524
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I G++++A +L +L + C D + +I LCK G + + LF+E
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI 584
Query: 388 R-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
R G PS++T N LI G C + ++ A DM+ +G P++ TYN LI G CK G +
Sbjct: 585 RKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ 644
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
E + + E++ +G P+ +++ LI L G + ++ +G V +D +WN L+
Sbjct: 645 EALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 203/432 (46%), Gaps = 15/432 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N Y ++I L++ D LL E+ P++ N F TVI + R
Sbjct: 244 NSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDV----NTFNTVIYGFCRLNRVLEG 299
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K R+ + + L++ L + R D + PNV N L+
Sbjct: 300 AKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG-----PNVVHFNTLVN 354
Query: 194 ALCKKDDV-EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ + E V D+M + G VP++ T +T++ G +G +A + D+ +G
Sbjct: 355 GFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCK 414
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TYT+L+DG+ K G+L +A ++ EM G N V Y +I A CK K EA ++
Sbjct: 415 PNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDM 474
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M + P +I LC ++EDA L++ ++ + + ++ +T+IH +
Sbjct: 475 FGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLR 534
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G+I EA KL D RG +TYN LI +C++ + + L+++M+ KG+ P++ T
Sbjct: 535 RGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIIT 594
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
N+LI GFC G + + +M+ +G P+ +++ LI GL + G E +
Sbjct: 595 CNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQ 654
Query: 492 ASGSVESDSWNF 503
A G ++ DS +
Sbjct: 655 AEG-IQPDSITY 665
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 198/414 (47%), Gaps = 13/414 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGR-P 130
F+ N TY ++H L + D ++LL+++ G N+ F T++ + GR
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP-------GPNVVHFNTLVNGFVRNGRLN 363
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E + ++ V + +TL+N L + + L N PN+ T I
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFG-SALELVNDMDAKGCKPNLNTYTI 422
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI CKK +E A +L EM + G N V + ++ G I A +FG++ +G
Sbjct: 423 LIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD T+ L+ G ++ + DA+ + +M GV N VT+ +I AF + + EA
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L++DML R +I LC+ G VE L++ ++RK P + +I+
Sbjct: 543 KLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGF 602
Query: 371 CKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C GK+ A + D RG P ++TYN+LI G+C+ + EA L++ + +G++P+
Sbjct: 603 CTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL-YESGNEGE 482
TYN LI C+ G + +L ++ G PN ++++L+ +S +EG+
Sbjct: 663 ITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQ 716
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 179/368 (48%), Gaps = 8/368 (2%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P P ++ LV+ R L+ A F Y + + + T+ ++++ L + F +
Sbjct: 342 PGPNVVHFNTLVNGFVRNGRLNEA-TAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS 400
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL--NT 154
L+ ++ C NL I G + +L + E S+ ++ N
Sbjct: 401 ALELVNDMDAK---GCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNA 457
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L++AL ++ + MF K P++FT N LI LC+ D++E A+ + +M
Sbjct: 458 LISALCKHGKIHEALDMFGEMSSK-GCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++ N VT T++ ++ RG+I+ A ++ D+L RG D TY L+ K G +
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ + +EM G+ P+ +T ++I FC K A + DM+ R + P +I+
Sbjct: 577 LGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING 636
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPS 393
LC+ G++++A L+++L + PD+ +T+I WLC+EG +A L+ E G +P+
Sbjct: 637 LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696
Query: 394 LLTYNTLI 401
+T+N L+
Sbjct: 697 DVTWNILV 704
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 222/435 (51%), Gaps = 10/435 (2%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+RLV+ + Q + + AL++ + A + + D Y II KL A AFD ++ L+ E+
Sbjct: 57 ERLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEM 116
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTF----LRIEKFNVQRSVRSLNTLLNALV 160
++ + G L + I +Y R +L F +++ F VQ + N LL L
Sbjct: 117 RREGH-EVGLGLVQSFIGSYA---RLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLA 172
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ + L+ + + + P+V T N +I ALC+ A+ +L+EM S + P+
Sbjct: 173 EGSKIKLLESAYTEMSSQ-GIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDE 231
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T TT++ G+V G IE A R+ + + G P + T VL++GY KLGR+ DA+ + +
Sbjct: 232 TTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQ 291
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
+G EP+ VT+ + C+ A +L MLQ P VI+ LC G+
Sbjct: 292 EIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGE 351
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
+E+A + +++ C+PD +T+I LC E ++ EA L E +G P++ T+N
Sbjct: 352 LEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI +C+ + A RL+++M G P+ TYN+LI C G + + +L+EM G
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471
Query: 460 CFPNKTSFSLLIEGL 474
C + +++ +I+GL
Sbjct: 472 CPQSTVTYNTIIDGL 486
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 2/298 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV+T NILI ALCK D A+R+ +EM S G P+ VT+ ++ G + A +
Sbjct: 404 PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDL 463
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ G TY ++DG K R+ +A +V D+M+ G+ N +T+ +I+ C
Sbjct: 464 LKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCN 523
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A L+D M+ P++ ++ C++G + A ++ + + D
Sbjct: 524 AERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVT 583
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ LCK + A KL +G P+ YN +I + +A L+ +M
Sbjct: 584 YATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMT 643
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E G P+ FTY ++ +G C+ G KE L EM D G P +SF +L EGL G
Sbjct: 644 EVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 243/476 (51%), Gaps = 16/476 (3%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF-DAVESLLTE 103
+ L++ + Q + D AL++ + A +F+ + Y II KL A D ++ L+TE
Sbjct: 45 EELLTALREQPDPDAALRMLN-AALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTE 103
Query: 104 LKQNPEIKCGENLFITVIRNYGLA-GRPELAVKTFLRIEK-----FNVQRSVRSLNTLLN 157
+++ G + + V+ ++ + R +L V + F +Q N LLN
Sbjct: 104 MRRE-----GHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLN 158
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
LV+ + L+ ++ + + P+V T N L+KALC+ V A+ +L+EM S G+
Sbjct: 159 VLVEGSKMKLLETVYSEMGER-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVA 217
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+ T TT++ G+V G I+ A RV +L+ G P T VL++GY KLGR+ DA+
Sbjct: 218 PDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGY 277
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+ + NG EP+++TY + C+ G A ++D M+Q + P V++ LC+
Sbjct: 278 IQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 337
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLT 396
G++E+A + +++ + C+PD +T+I LC ++ EA L + +G P + T
Sbjct: 338 NGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYT 397
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+N LI +C+ + A RL+++M G P+ TYN LI C +G + + +L+EM
Sbjct: 398 FNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEME 457
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
GC + +++ +I+GL + E +V G S + ++N L+ + D
Sbjct: 458 SAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 513
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + NTL+ AL R + + + K + P+V+T NILI ALCK D + A+R+
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLK-GLSPDVYTFNILINALCKVGDPQLALRLF 418
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EM S G P+ VT+ T++ G + A + ++ G TY ++DG K
Sbjct: 419 EEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKK 478
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
R+ +A +V D+M+ G+ N +T+ +I+ CK K+ +A L+ M+ P++
Sbjct: 479 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITY 538
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
++ C++G ++ A ++ + + D T+I+ LCK G+ A KL
Sbjct: 539 NSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRI 598
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA-K 446
+G + YN +I + +A L+ +M E G P+ FTY ++ +G C+ G + +
Sbjct: 599 KGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIR 658
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E L EM+DKG P +SF +L EGL G
Sbjct: 659 EAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 228/478 (47%), Gaps = 41/478 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+++++ L RA +L E+ + + E F T+++ + G + A++ R
Sbjct: 187 TFNTLMKALCRAHQVRTAVLMLEEMSSSG-VAPDETTFTTLMQGFVEEGSIKAALRVKAR 245
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD-----------------------LVHLMFKNSR 176
+ + + ++N L+N + R + V+ + +N
Sbjct: 246 MLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305
Query: 177 --HKFKVV---------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
H KV+ P+VFT NI++ LCK +E A +L++M G +P++ T T
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNT 365
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ +E A + + +G PD T+ +L++ K+G A+++ +EM+ +G
Sbjct: 366 LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
P+EVTY +I+ C K G+A +LL +M S+ +ID LC++ ++E+A
Sbjct: 426 CTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAE 485
Query: 346 ELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
E++ ++ + + NAI+ +T+I LCK+ +I +A +L + G P+ +TYN+++
Sbjct: 486 EVFDQMDLQG-ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTH 544
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C+ ++ +A + M G E +V TY LI G CK G + +++L M KG
Sbjct: 545 YCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRAT 604
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
+++ +I+ L+ N + + T G D++ + + + L G G++ E
Sbjct: 605 PKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE-PPDAFTYKI--VFRGLCRGGGSIRE 659
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 211/400 (52%), Gaps = 6/400 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I +A + S+L + +P++ + T++R+ +G+ + A++ R
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVV----TYNTILRSLCDSGKLKQAMEVLDR 229
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + V + L+ A ++ + R + P+V T N+L+ +CK+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GCTPDVVTYNVLVNGICKEG 288
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ L++MPS G PN++TH IL G +A+++ D+L +G+ P T+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + G L A+ ++++M +G +PN ++Y ++ FCK KK A L+ M+ R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GKVEDA E+ +L K C P +T+I L K GK +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE + P +TY++L+ G+ ++ EA + + + G+ PN T+N ++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK I L M+++GC PN+TS+++LIEGL G
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 165/315 (52%), Gaps = 6/315 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP++ C LI+ C+ A ++L+ + G VP+++T+ ++ GY G+I NA
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 242 VFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V LDR V PD TY ++ G+L A++V+D M P+ +TY ++IEA
Sbjct: 194 V----LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ G A LLD+M R P +++ +C+EG++++A + + C P+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ +C G+ +A+KL D +G PS++T+N LI +C L A + +
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G +PN +YN L+ GFCK I LE M+ +GC+P+ +++ ++ L + G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 480 EGEVGKVVSMATASG 494
+ ++++ ++ G
Sbjct: 430 VEDAVEILNQLSSKG 444
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 173/340 (50%), Gaps = 7/340 (2%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ + + ++E + L+ M G VP+++ TT++ G+ G A ++ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VPD TY V++ GY K G + +A+ V+D M V P+ VTY ++ + C K +A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+LD MLQR P +I+ C + V A +L + + C PD + +++ +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ EA K ++ G P+++T+N ++ MC + +A +L DM+ KG P+V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL-YESGNEGEVGKVVSM 489
T+N+LI C+ G I ILE+M GC PN S++ L+ G E + + + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 490 ATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ + ++N +LT + D ++ L++L K C
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N + M + EL E + ++MV G P++ LI+GFC++G ++ +ILE +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSG 515
G P+ +++++I G ++G V+ + S V ++N +L + L
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV--TYNTILRSLCDSGKLKQA 223
Query: 516 AGALDELLVKNC 527
LD +L ++C
Sbjct: 224 MEVLDRMLQRDC 235
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 198/369 (53%), Gaps = 1/369 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++R GR E AV + + + NTL+ A + D + R +
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
PN+ T N ++ LCK +EGA +V DEM G+ P++V++ T+L GY G + +
Sbjct: 76 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
VF ++ RG VPD T+T L+ K G L AV ++ +M + G+ NEVT+ +I+
Sbjct: 136 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 195
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FCK +A +++M + PS +I+ C+ G+++ A EL + + K PD
Sbjct: 196 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 255
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
STII CK G + A +L + ++G +P +TY++LI G+CE L +A L++
Sbjct: 256 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 315
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ GV+P+ FTY LI G CK GN ++ + + +EM+ KG P+ ++S+LI GL +S
Sbjct: 316 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 375
Query: 479 NEGEVGKVV 487
E +++
Sbjct: 376 RTKEAHRLL 384
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 208/419 (49%), Gaps = 17/419 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++++ RA D E +++ +++ K F +++ AGR E A K
Sbjct: 44 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 103
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + V S NTLL+ + +F + +VP+V T LI A C
Sbjct: 104 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR-GLVPDVVTFTSLIHATC 162
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++E A+ ++ +M G+ N VT T ++ G+ +G +++A ++ G P
Sbjct: 163 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 222
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++GY KLGR+ A +++ EME V+P+ VTY +I +CK A L M
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L++ +P + +I LCEE ++ DACEL++ +L+ PD +T+I CKEG +
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 342
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN-- 433
+A L DE R G +P ++TY+ LI G+ +SA EA RL + + P+ Y+
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 402
Query: 434 -------------MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L++GFC G KE ++ + MLD+ + + +S+LI G GN
Sbjct: 403 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 461
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 163/301 (54%), Gaps = 2/301 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V PNV+T NIL++ALC + +E A+ V+ +M G PN VT+ T++ + G+++
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62
Query: 238 NAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+RV + + G P+ T+ +++G K GR+ A KV DEM G+ P+ V+Y +
Sbjct: 63 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK E+ + +M QR VP +I C+ G +E A L ++ +
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
+ + +I CK+G + +A +E + I PS++ YN LI G C+ + A
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 242
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L +M K V+P+V TY+ +I G+CK+GN ++ ++ML KG P+ ++S LI GL
Sbjct: 243 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 302
Query: 476 E 476
E
Sbjct: 303 E 303
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 114/201 (56%), Gaps = 4/201 (1%)
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M +GV PN TY +++ A C + EA ++ DM P++ ++ C G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 341 VEDACELWKRLLRK--NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTY 397
+ D E L+R+ N P+ +++++ LCK G++ A+K+FDE R G P +++Y
Sbjct: 61 L-DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NTL++G C+ L E+ ++ +M ++G+ P+V T+ LI CK GN ++ + ++ +M +
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 458 KGCFPNKTSFSLLIEGLYESG 478
+G N+ +F+ LI+G + G
Sbjct: 180 RGLRMNEVTFTALIDGFCKKG 200
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--ER 388
++ LC G++E+A + + C P+ +T++ C+ G++ A+++ E
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ P+L+T+N+++ G+C++ + A +++D+MV +G+ P+V +YN L+ G+CK+G E
Sbjct: 76 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSM 489
+ + EM +G P+ +F+ LI ++GN E V V M
Sbjct: 136 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P++ TYN L+ +C L EA + DM G PN TYN L+ FC+ G
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 449 IRILEEMLDKG-CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLT 506
R++ M ++G PN +F+ ++ GL ++G KV G + + S+N LL+
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
MV GV PNV+TYN+L++ C G +E + ++ +M GC PN +++ L+ +G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 480 EGEVGKVVSMATASGSVESDSWNF 503
+VVS+ G+ + + F
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTF 84
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 257/499 (51%), Gaps = 16/499 (3%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P P + L++ + + + A +F A K+ P+ +Y +I+ L RA +
Sbjct: 5 PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVV----SYSCLINSLGRAGKW 60
Query: 95 DAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+A ++ E++ C NL+ T++ G AG+ + A++ + VR+
Sbjct: 61 EAALEVVAEMQAK---GCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTY 117
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N L++ L + R +F R + VP+ FT N LI L K + A+ +L+EM
Sbjct: 118 NCLISTLGKAGRLSEAFTLFAEMRER-GCVPDTFTYNSLIYGLGKVGRSQKAMELLEEME 176
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G P+++T+++++ G G+ A ++F ++ RG PD+ T+T LMD K GR+
Sbjct: 177 RHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVD 236
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
DA++++DEM++ GV+P VTY +I F K EA NLLD+M + P +I
Sbjct: 237 DALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLI 296
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSI 391
L + ++++AC++ K++ ++ C PD +T+I+ L K G + +A +LFD + +G
Sbjct: 297 TGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN 356
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P ++TY+TLI + ++A + A L+++M G++P++FTY +I K G + R+
Sbjct: 357 PDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRL 416
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRI-- 508
EM KG P+ +++ + L G E K+ SG + + +++ LL +
Sbjct: 417 FSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSK 476
Query: 509 VSDLDSGAGALDELLVKNC 527
++D G L EL+ + C
Sbjct: 477 TKEVDDACGLLKELIEQGC 495
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 227/496 (45%), Gaps = 20/496 (4%)
Query: 9 ITAPSCLLQSIGGA---RCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH 65
+ + SCL+ S+G A +L + P LV + + D AL++
Sbjct: 44 VVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLL- 102
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRN 123
A + TY+ +I L +A +L E++ E C + F ++I
Sbjct: 103 -AEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR---ERGCVPDTFTYNSLIYG 158
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKF 179
G GR + A++ +E+ V + ++L+ L ++ K + L M + R
Sbjct: 159 LGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRK-- 216
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
P+ T L+ AL K V+ A+ +LDEM G+ P +VT+ ++ G+ GD+ A
Sbjct: 217 ---PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEA 273
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ G PD TY+ L+ G IK +L +A +V+ +ME G P+ +TY +I
Sbjct: 274 YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLING 333
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
K +A L D M + P +I L + +VE AC L++ + PD
Sbjct: 334 LGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPD 393
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+II L K G++ +A +LF E +G P ++TYN + + EA ++++
Sbjct: 394 LFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFE 453
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
DM E G+ P+V TY+ L+ G K + +L+E++++GC + F +E L G
Sbjct: 454 DMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWG 513
Query: 479 NEGEVGKVVSMATASG 494
N E +++ A + G
Sbjct: 514 NVDEAHELLQFANSKG 529
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 199/408 (48%), Gaps = 9/408 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I+ L + LL E++++ P++ + ++I G G A K
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT----YSSLITGLGKDGETVKAFKL 206
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +++ + + L++AL + R D + + + V P V T N LI
Sbjct: 207 FQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKER-GVKPGVVTYNALIAGFG 265
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K D+ A +LDEM G P++VT++ ++ G + ++ A +V + G PD
Sbjct: 266 KVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTI 325
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L++G K G L DA ++ D M+ G P+ VTY +I A K + A L ++M
Sbjct: 326 TYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM 385
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P C +I +L + G+V+DA L+ + K PD + ++ L + G+
Sbjct: 386 ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRF 445
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA+K+F++ E G +P + TY+ L+ G+ ++ E+ +A L +++E+G + ++
Sbjct: 446 KEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDEC 505
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
++ GN E +L+ KG +P +S++ LI+ L ++G E
Sbjct: 506 LEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 192/401 (47%), Gaps = 5/401 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ +++ L +A D LL E+K+ +K G + +I +G G A
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERG-VKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ + V + + L+ L++ + D + K K P+ T N LI L K
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK-MEKEGCPPDTITYNTLINGLGKAG 338
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A R+ D M S G P++VT++T++ +E+A +F ++ G PD TY
Sbjct: 339 LLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYC 398
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ K G++ DA ++ EM G+ P+ +TY + + +G + EAR + +DM +
Sbjct: 399 SIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P A ++ L + +V+DAC L K L+ + C D+ + L G + EA
Sbjct: 459 GLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEA 518
Query: 380 KKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+L +F +G P +YN LI + ++ ++EA +D+ E+G +P++ +Y+ LI
Sbjct: 519 HELL-QFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLIS 577
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G +LEEM +G + S+S L+ L + G
Sbjct: 578 ALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 210/400 (52%), Gaps = 6/400 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I +A + S+L + +P++ + T++R+ +G+ + A++ R
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVV----TYNTILRSLCDSGKLKQAMEVLDR 229
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + V + L+ A ++ + R + P+V T N+L+ +CK+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDR-GCTPDVVTYNVLVNGICKEG 288
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ L++MPS G PN++TH IL G +A+++ D+L +G+ P T+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + G L A+ ++++M +G +PN ++Y ++ FCK KK A L+ M+ R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GKVEDA E+ +L K C P +T+I L K GK +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE + P +TY++L+ G+ ++ EA + + + GV PN T+N ++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK I L M+++GC P +TS+++LIEGL G
Sbjct: 529 LCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEG 568
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP++ C LI+ C+ A ++L+ + G VP+++T+ ++ GY G+I NA
Sbjct: 134 VPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 242 VFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V LDR V PD TY ++ G+L A++V+D M P+ +TY ++IEA
Sbjct: 194 V----LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ G+A LLD+M R P +++ +C+EG++++A + + C P+
Sbjct: 250 CRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ +C G+ +A+KL D +G PS++T+N LI +C L A + +
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G +PN +YN L+ GFCK I LE M+ +GC+P+ +++ ++ L + G
Sbjct: 370 MPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 480 EGEVGKVVSMATASG 494
+ ++++ ++ G
Sbjct: 430 VEDAVEILNQLSSKG 444
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 173/340 (50%), Gaps = 7/340 (2%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ L + ++E + L+ M G VP+++ TT++ G+ G A ++ + G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VPD TY V++ GY K G + +A+ V+D M V P+ VTY ++ + C K +A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+LD MLQR P +I+ C + V A +L + + C PD + +++ +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ EA K ++ G P+++T+N ++ MC + +A +L DM+ KG P+V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL-YESGNEGEVGKVVSM 489
T+N+LI C+ G I ILE+M GC PN S++ L+ G E + + + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 490 ATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ + ++N +LT + D ++ L++L K C
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N + + + EL E + ++MV G P++ LI+GFC++G ++ +ILE +
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSG 515
G P+ +++++I G ++G V+ + S V ++N +L + L
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV--TYNTILRSLCDSGKLKQA 223
Query: 516 AGALDELLVKNC 527
LD +L ++C
Sbjct: 224 MEVLDRMLQRDC 235
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 209/436 (47%), Gaps = 9/436 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + + L+ A +F H + + Y S+IH L A +FD L ++ +
Sbjct: 16 LIDGLAKAGKLNDARNLFQKL--LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 107 N--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
P N+ I G+ +K IE +V V + NT+++ L ++ R
Sbjct: 74 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM--IEDGHVP-DVVTYNTVMDGLCKSSR 130
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ L+F N + PN + N +I LC++ ++ A +V EM + + P+ ++
Sbjct: 131 VEEALLLF-NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYG 189
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ G G + A ++F +LD G P A TY V++ G L +A+++ M
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G P+ T+ ++I+A CK K EA LL M +VP +I LC +V+DA
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
L + ++++ C P +T+IH LCK G+I EA+++ D G P ++TYNTL+ G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + + A L DMV +G+ PNV TY L+ G CK E + +M GC PN
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 464 KTSFSLLIEGLYESGN 479
+++ LI G +G
Sbjct: 430 LFTYTALILGFCSAGQ 445
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 215/427 (50%), Gaps = 11/427 (2%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N S + +Y +I LA+A + +L +L + + + ++I +A +
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG-VTPSTVAYTSLIHGLCMANSFDD 63
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTC 188
A + F + + S + N +++A + + DL+ M ++ VP+V T
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH-----VPDVVTY 118
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N ++ LCK VE A+ + +EM +G PN +H TI+ G + I+ A +VF ++
Sbjct: 119 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+ PD+ +Y +L+DG K G+L +A K+ M D+G+ P+ VTY V+I C E
Sbjct: 179 KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L M + PS +ID C+ GK+++A L KR+ +PD ST+I
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLIS 298
Query: 369 WLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC ++ +A+ L D +R P+++T NTLI G+C++ + EA + D MV G P
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+V TYN L+ G C+ G + +L +M+ +G PN +++ L+ GL ++ E V
Sbjct: 359 DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF 418
Query: 488 SMATASG 494
+ +SG
Sbjct: 419 AQMKSSG 425
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 194/424 (45%), Gaps = 25/424 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N ++++II L + D + E++ +I + +I AG+ A K
Sbjct: 149 NRRSHNTIILGLCQQSKIDQACQVFHEMEAK-DIPPDSWSYGILIDGLAKAGKLNEAYKL 207
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F R+ + S + N +++ + D +FK+ R K P+ FT NILI A C
Sbjct: 208 FQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK-GCRPSRFTFNILIDAHC 266
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A R+L M G VP++VT++T++ G +++A+ + D++ R P
Sbjct: 267 KRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T L+ G K GR+ +A +V+D M +G P+ VTY ++ C+ ++ AR LL DM
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R P+ ++ LC+ ++ +AC ++ ++ C P+ + +I C G++
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESA------ELTEAGR------LWDDMVEK 423
KLF E I P + Y TL A +C+S E+ GR W D V
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-- 504
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
Y + G + G + + + +M+ G P + L+ GL +SG GE
Sbjct: 505 --------YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556
Query: 484 GKVV 487
V+
Sbjct: 557 RAVL 560
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 166/314 (52%), Gaps = 4/314 (1%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+ ++ ++ G G + +A+ +F +L G P YT L+ G DA ++
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+M G P+ VTY VMI+A CK EA +L+ M++ +VP V+D LC+
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
+VE+A L+ + R C P+ +TII LC++ KI +A ++F E E I P +
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y LI G+ ++ +L EA +L+ M++ G+ P+ TYN++I G C E + + + M
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRI--VSDLD 513
KGC P++ +F++LI+ + G E +++ T G V + +++ L++ + ++ +D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 514 SGAGALDELLVKNC 527
L++++ + C
Sbjct: 308 DARHLLEDMVKRQC 321
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 49/324 (15%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDA 96
P R L+ ++ LD A ++ K + H D TY ++I L D
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLL----KRMTDDGHVPDVVTYSTLISGLCSIARVDD 308
Query: 97 VESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
LL ++ + +C + T+I AGR + A + + V + NT
Sbjct: 309 ARHLLEDMVKR---QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L++ + + + + + + + PNV T L+ LCK + + A V +M S
Sbjct: 366 LVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL------------- 261
G PNL T+T ++ G+ G ++ ++FG+++ G PD Y L
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 262 ------------------------MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+DG ++ G++ A+ + +M G P ++
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 544
Query: 298 EAFCKGKKSGEARNLLDDMLQRKY 321
CK + GEAR +L++++ Y
Sbjct: 545 AGLCKSGQGGEARAVLEEIMDLAY 568
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 209/436 (47%), Gaps = 9/436 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + + L+ A +F H + + Y S+IH L A +FD L ++ +
Sbjct: 16 LIDGLAKAGKLNDARDLFQKL--LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 107 N--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
P N+ I G+ +K IE +V V + NT+++ L ++ R
Sbjct: 74 RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKM--IEDGHVP-DVVTYNTVMDGLCKSGR 130
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ L+F N + PN + N +I LC++ ++ A +V EM + + P+ ++
Sbjct: 131 VEEALLLF-NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ G G + A ++F +LD G P A TY V++ G L +A+++ M
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G P+ T+ ++I+A CK K EA LL M +VP +I LC +V+DA
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
L + ++++ C P +T+IH LCK G+I EA+++ D G P ++TYNTL+ G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + + A L DMV +G+ PNV TY L+ G CK E + +M GC PN
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 464 KTSFSLLIEGLYESGN 479
+++ LI G +G
Sbjct: 430 LFTYTALILGFCSAGQ 445
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 214/427 (50%), Gaps = 11/427 (2%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N S + +Y +I LA+A + L +L + + + ++I +A +
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSG-VTPSTVAYTSLIHGLCMANSFDD 63
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTC 188
A + F + + S + N +++A + + DL+ M ++ VP+V T
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH-----VPDVVTY 118
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N ++ LCK VE A+ + +EM +G PN +H TI+ G + I+ A +VF ++
Sbjct: 119 NTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R PD+ +Y +L+DG K G+L +A K+ M D+G+ P+ VTY V+I C E
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L M + PS +ID C+ GK+++A L KR+ +PD ST+I
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLIS 298
Query: 369 WLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC ++ +A+ L D +R P+++T NTLI G+C++ + EA + D MV G P
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+V TYN L+ G C+ G + +L +M+ +G PN +++ L+ GL ++ E V
Sbjct: 359 DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF 418
Query: 488 SMATASG 494
+ +SG
Sbjct: 419 AQMKSSG 425
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 193/424 (45%), Gaps = 25/424 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N ++++II L + D + E++ +I + +I AG+ A K
Sbjct: 149 NRRSHNTIILGLCQQSKIDQACQVFHEMEAR-DIPPDSWSYGILIDGLAKAGKLNEAYKL 207
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F R+ + S + N +++ + D +FK+ R K P+ FT NILI A C
Sbjct: 208 FRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK-GCRPSRFTFNILIDAHC 266
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A R+L M G VP++VT++T++ G +++A+ + D++ R P
Sbjct: 267 KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T L+ G K GR+ +A +V+D M +G P+ VTY ++ C+ ++ AR LL DM
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R P+ ++ LC+ ++ +AC ++ ++ C P+ + +I C G++
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESA------ELTEAGR------LWDDMVEK 423
KLF E I P + Y TL A +C+S E+ GR W D V
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-- 504
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
Y + G G + + + +M+ G P + L+ GL +SG GE
Sbjct: 505 --------YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556
Query: 484 GKVV 487
V+
Sbjct: 557 RAVL 560
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 167/314 (53%), Gaps = 4/314 (1%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+ ++ ++ G G + +A+ +F +L G P YT L+ G DA ++
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+M G P+ VTY V+I+A CK EA +L+ M++ +VP V+D LC+
Sbjct: 68 FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
G+VE+A L+ + R C P+ +TII LC++ KI +A ++F E E I P +
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y LI G+ ++ +L EA +L+ M++ G+ P+ TYN++I G C E + + + M
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRI--VSDLD 513
KGC P++ +F++LI+ + G E +++ T G V + +++ L++ + ++ +D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 514 SGAGALDELLVKNC 527
L++++ + C
Sbjct: 308 DARHLLEDMVKRQC 321
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 49/324 (15%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDA 96
P R L+ ++ +D A ++ K + H D TY ++I L D
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLL----KRMTDDGHVPDVVTYSTLISGLCSIARVDD 308
Query: 97 VESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
LL ++ + +C + T+I AGR + A + + V + NT
Sbjct: 309 ARHLLEDMVKR---QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L++ + + + + + + + PNV T L+ LCK + + A V +M S
Sbjct: 366 LVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL------------- 261
G PNL T+T ++ G+ G ++ ++FG+++ G PD Y L
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 262 ------------------------MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+DG + G++ A+ + +M G P ++
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLV 544
Query: 298 EAFCKGKKSGEARNLLDDMLQRKY 321
CK + GEAR +L++++ Y
Sbjct: 545 AGLCKSGQGGEARAVLEEIMDLAY 568
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 228/484 (47%), Gaps = 50/484 (10%)
Query: 60 ALQIFHYAGK--FHPNFSHNY-----DTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
A FH+A + F P + Y + L F+ SLL P +K
Sbjct: 106 AFNFFHFASETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELF-SLLANKGLFPSLKT 164
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
L ++++ A +++ + F + V V +T++NA R D +F
Sbjct: 165 CNFLLSSLVK----ANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELF 220
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ K V PNV T N +I LCK ++ A + ++M + P+LVT+ ++ G V
Sbjct: 221 R-KMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+ A + ++ DRG+ P+ Y L+DGY ++G ++ A+++ D+M NG+ PN VT
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVT 339
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQ---------------------------------- 318
+I+ +CK + A +LL++ML
Sbjct: 340 CNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML 399
Query: 319 -RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R + P+ L ++ LC+ GK +A ELW RLL K + S+ +IH LC+ G
Sbjct: 400 LRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKE 459
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA KL E ERG + ++YNTLI C+ ++ E +L ++MV +G++P+++TYNML+
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G C +G +E + E G FP+ ++ ++I+G Y N E G+ + + +
Sbjct: 520 HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDG-YCKANRVEEGEKLFQEMVTMKI 578
Query: 497 ESDS 500
E ++
Sbjct: 579 EQNA 582
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 214/458 (46%), Gaps = 7/458 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ R N+ ALQI S N T +S+I ++ + E
Sbjct: 300 PNNVVYNTLIDGYCRIGNISTALQI--RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAE 357
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
LL E+ + + F +VI L R + A+ + + N + + L L++
Sbjct: 358 HLLEEMLTGGGV-INQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSG 416
Query: 159 LVQN-KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L QN K+ + + L ++ F N T N LI LC+ E A ++L EM G+V
Sbjct: 417 LCQNGKQSEAIELWYRLLEKGF--AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLV 474
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+ +++ T++ G +E ++ +++ RG PD TY +L+ G +G++ +A +
Sbjct: 475 LDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGL 534
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
E + NG P+ TYG+MI+ +CK + E L +M+ K ++ + +I CE
Sbjct: 535 WHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCE 594
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
G + +A L + + +A S++IH L G + A +L DE + G P+++
Sbjct: 595 NGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVC 654
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y LI G C+ ++ + + +M V PN TY ++I G CK+GN K ++L EM
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA 714
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
KG P+ +++ L G + G E KV + + G
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 13/403 (3%)
Query: 77 NYDTYHSIIHKLARARAFDA-----VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
N T+ S+IH+L FD+ +E LL K N + L ++ G+
Sbjct: 371 NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPN------DGLLTLLVSGLCQNGKQS 424
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A++ + R+ + + + N L++ L + + + K + V+ ++ + N L
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSI-SYNTL 483
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I A CK+ VE ++ +EM G+ P++ T+ +L G G IE A ++ + G
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PDA TY +++DGY K R+ + K+ EM +E N V YG +I A+C+ EA
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L DDM R +SA +I L G V+ A +L + ++ P+ + +I C
Sbjct: 604 LRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYC 663
Query: 372 KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G++ + + E ++ P+ +TY +I G C+ + A +L ++M +KG+ P+
Sbjct: 664 KLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAV 723
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
TYN L GFCK G +E +++ + M G + +++ LI+G
Sbjct: 724 TYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 220/470 (46%), Gaps = 44/470 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESL--LTE 103
L+S + + + ++ Q+F H + + + ++++ R DA+E + +
Sbjct: 168 LLSSLVKANEVKMSYQVFDIM--CHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK 225
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ P + N+ + +N GR + A + ++EK V+ S+ + L+N LV+ +
Sbjct: 226 VGVAPNVVTYNNIIHGLCKN----GRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLE 281
Query: 164 RYDLVHLMFKNSRHKF----------------------------------KVVPNVFTCN 189
R+D + + K + + PN TCN
Sbjct: 282 RFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCN 341
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI+ CK + +E A +L+EM + G V N T T+++ + ++A ++L R
Sbjct: 342 SLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLR 401
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
+ P+ T+L+ G + G+ ++A+++ + + G N VT +I C+ EA
Sbjct: 402 NFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEA 461
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LL +ML+R V S +I C+EGKVE+ +L + ++R+ PD + ++H
Sbjct: 462 AKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG 521
Query: 370 LCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC GKI EA L+ E ++ G+ P TY +I G C++ + E +L+ +MV +E N
Sbjct: 522 LCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQN 581
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y LI+ +C+ GN +E R+ ++M +G ++S LI GL G
Sbjct: 582 AVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 169/327 (51%), Gaps = 2/327 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P++ TCN L+ +L K ++V+ + +V D M G+ P++ +T++ + G +++A
Sbjct: 158 LFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAI 217
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + G P+ TY ++ G K GRL +A + ++ME V+P+ VTYGV+I
Sbjct: 218 ELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGL 277
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K ++ EA +L +M R Y P++ + +ID C G + A ++ ++ P++
Sbjct: 278 VKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNS 337
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++I CK ++ A+ L +E G + + T+ ++I +C A +
Sbjct: 338 VTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIME 397
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ + +PN +L+ G C+ G E I + +L+KG N + + LI GL E+G+
Sbjct: 398 MLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGS 457
Query: 480 EGEVGKVVSMATASGSV-ESDSWNFLL 505
+ E K++ G V +S S+N L+
Sbjct: 458 KEEAAKLLKEMLERGLVLDSISYNTLI 484
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 157/335 (46%), Gaps = 11/335 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ N T +++IH L A + + LL E+ + + + T+I G+ E
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLV-LDSISYNTLILACCKEGKVEEG 496
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCN 189
K + + +Q + + N LL+ L + + L H KN P+ +T
Sbjct: 497 FKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN-----FPDAYTYG 551
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
I+I CK + VE ++ EM +M + N V + T++ Y G++ A R+ D+ R
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G + TY+ L+ G +G + A +++DEM G+ PN V Y +I +CK + +
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
++L +M P+ +I+ C+ G ++ A +L + +K +PD + + +
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNG 731
Query: 370 LCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAG 403
CKEGK+ EA K+ D G I +TY TLI G
Sbjct: 732 FCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 41/290 (14%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F + ++G P T L+ +K + + +V D M GV P+ + M+ AFC
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
G G+V+DA EL++++ + P+
Sbjct: 209 TG-----------------------------------GRVDDAIELFRKMEKVGVAPNVV 233
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ IIH LCK G++ EA + ++ E+ + PSL+TY LI G+ + EA + +M
Sbjct: 234 TYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM 293
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
++G PN YN LI G+C+IGN ++I ++M+ G PN + + LI+G Y N+
Sbjct: 294 SDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQG-YCKSNQ 352
Query: 481 GEVGK--VVSMATASGSVESDSWNFLLTRIV--SDLDSGAGALDELLVKN 526
E + + M T G + ++ ++ R+ DS + E+L++N
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
K + NF Y TY +I +A + E L E+ +I+ ++ T+IR Y G
Sbjct: 539 KKNGNFPDAY-TYGIMIDGYCKANRVEEGEKLFQEM-VTMKIEQNAVVYGTLIRAYCENG 596
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
A + + + ++ + ++L++ L D + + R K + PNV
Sbjct: 597 NMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMR-KEGLSPNVVCY 655
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI CK + +L EM + PN +T+T ++ G+ G+++ A ++ ++
Sbjct: 656 TALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQ 715
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+G VPDA TY L +G+ K G++ +A+KV D M G+ +++TY +I+ + K
Sbjct: 716 KGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 228/438 (52%), Gaps = 26/438 (5%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P +L+ + RQ + AL++ +A K PNF N Y I+ KL + +F++++ +L E
Sbjct: 54 PAQLLDTLRRQNDETAALRLLSWASK-QPNFRPNSSIYEEILRKLGKVGSFNSMKDILQE 112
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPE--LAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+K + + + + I +Y E L + + +E F + N LLN LV
Sbjct: 113 MK-GLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVE-FGLALDTLLYNFLLNVLVD 170
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ LV + K + P+V T NILIKALCK + AI V++EM S G+VP+
Sbjct: 171 GNKLKLVENVHSTMVSK-GIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEK 229
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T TT++ G++ G+++ A RV +LD G T VL+ G+ K GR+ +A+ +DEM
Sbjct: 230 TFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM 289
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G K A L ++M + P +ID LC GK+
Sbjct: 290 SNEG-------------------KHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKL 330
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
++A L + + C + +T+I CK KI EA+++FD+ E +G + +TYNTL
Sbjct: 331 QEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTL 390
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G+C+S + EA +L D M+ +G++P+ FTYN ++ FC+ G+ ++ I++ M GC
Sbjct: 391 IDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGC 450
Query: 461 FPNKTSFSLLIEGLYESG 478
P+ ++ LI GL ++G
Sbjct: 451 EPDIVTYGTLIGGLCKAG 468
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 6/322 (1%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
AI + +EM + G P+ T+ ++ +RG ++ A + ++ G + TY L+D
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLID 357
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ K ++ +A ++ D+ME G+ N VTY +I+ CK ++ EA L+D M+ P
Sbjct: 358 GFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKP 417
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++ C EG ++ A ++ + + C PD T+I LCK G++ A +L
Sbjct: 418 DKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLL 477
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ +G + + YN +I + + EA RL+ +M EKG P+ FTY ++ +G
Sbjct: 478 RSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNS 537
Query: 443 GNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS- 500
G E + + EM++KG P +SF +L EGL E + K+V + + +
Sbjct: 538 GGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQNEV 597
Query: 501 ---WNFLLTRIVSDLDSGAGAL 519
FL R D + G L
Sbjct: 598 VMIRGFLKIRKFQDALATLGGL 619
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 206/407 (50%), Gaps = 38/407 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + N + S+ L ++ + K+Y V + N F V V++ NILI
Sbjct: 77 ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTV-VYLCNQMDLFGVTHTVYSLNILI 135
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+ + V+ A+ V +M +G+ P+++T TT++ G G I+ A ++ +++ G
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD +Y L++G G AV V +ME NG +PN VTY +I++ CK + +A +
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD----NAI------ 362
L +M+ R P + ++ LC G++ +A L+KR+ + C PD N I
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYK 315
Query: 363 -------------------------SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLT 396
+TI+H LC G++ EA +LF + E +G P ++
Sbjct: 316 DRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA 375
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNT+I +C+ + +A +MV++G+ PN TY+ ++ GFC +G E ++ +EM+
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+ PN +FS+L++GL + G E V T G VE + + +
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG-VEPNIYTY 481
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 242/490 (49%), Gaps = 52/490 (10%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESL---LTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
+H + + +I+ L R D S+ + +L P++ F T+I G+ +
Sbjct: 125 THTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVIT----FTTLINGVCNEGKIK 180
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL-VHLMFKNSRHKFKVVPNVFTCNI 190
+AV+ + + + + V S NTL+N L + ++ VH+ K ++ K PNV T N
Sbjct: 181 VAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCK--PNVVTYNT 238
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF------- 243
+I +LCK V A+ L EM G+ P+ +T+ +I+ G G + A R+F
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298
Query: 244 ----------------------------GDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+++D+G PD TYT ++ G LG+L +A+
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ +ME G +P+ V Y +I++ CK + +A L +M+ R P++ ++
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGF 418
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C G++++A +L+K ++ +N MP+ S ++ LC+EG + EA+ +F+ E+G P++
Sbjct: 419 CNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
TYN L+ G C ++ EA ++++ MV KG P++ +YN+LI G+C + +L +
Sbjct: 479 YTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQ 538
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSDLD 513
M K PN +++ +++GL G + ++ +SG + + +++ LL +
Sbjct: 539 MSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH-- 596
Query: 514 SGAGALDELL 523
G LDE L
Sbjct: 597 ---GHLDEAL 603
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 228/478 (47%), Gaps = 44/478 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L++ + R ++D A+ + + F + T+ ++I+ + L E+ +
Sbjct: 134 LINCLCRLNHVDFAVSV--WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ P++ + T+I +G +AV F ++E+ + +V + NT++++L +++
Sbjct: 192 SGHEPDVIS----YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247
Query: 164 RYD-----------------------LVHLM-----FKNSRHKFKVV------PNVFTCN 189
+ +VH + + FK + P+V T N
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN 307
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
I+I +L K V A L EM G+ P++VT+TTIL G + G + A R+F + +
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD Y ++D K + DA++ + EM D G+ PN VTY ++ FC + EA
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L +M+ R +P++ ++D LC+EG V +A +++ + K P+ + +++
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Query: 370 LCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
C K+ EA+K+F+ +G P L +YN LI G C S + +A L M K + PN
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPN 547
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
TYN +++G C +G + + ++M G P ++S+L+ GL + G+ E K+
Sbjct: 548 TVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKL 605
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 204/407 (50%), Gaps = 9/407 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+SI+H L + L ++QN P++ N+ I + L A
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDV-VTYNIIIDSLYKDRLVND---AADF 325
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + V + T+L+ L + + +FK K P+V N +I +LC
Sbjct: 326 LSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK-GCKPDVVAYNTIIDSLC 384
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V A+ L EM G+ PN VT++TIL G+ G ++ A ++F +++ R +P+
Sbjct: 385 KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL 444
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+++L+DG + G +++A V + M + GVEPN TY ++ +C K EAR + + M
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + P +I+ C +++ A L ++ K P+ +TI+ LC G++
Sbjct: 505 VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A++LF + G +P+L+TY+ L+ G+C+ L EA +L+ M EK +EP++ Y +L
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
I+G G + + ++ G P +++++I+GL + G E
Sbjct: 625 IEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDE 671
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 223/462 (48%), Gaps = 15/462 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSH-NYDTYHSIIHKLARARAFDAV 97
P + L++ + N ++A+ +F K N N TY++II L + R +
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFK---KMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
L+E+ I + +++ G+ A + F R+E+ + V + N +++
Sbjct: 253 MDFLSEMVGR-GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311
Query: 158 ALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L + N D + M + P+V T ++ LC + AIR+ +M
Sbjct: 312 SLYKDRLVNDAADFLSEMVDQG-----IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++V + TI+ + +A +++DRG P+A TY+ ++ G+ LG+L +
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A ++ EM V PN +T+ ++++ C+ EAR + + M ++ P+ +++
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIP 392
C K+ +A ++++ ++ K C PD + +I+ C ++ +AK L + + P
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ +TYNT++ G+C L +A L+ M G+ P + TY++L+ G CK G+ E +++
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ M +K P+ +++LIEG++ G + S +A G
Sbjct: 607 KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 187/379 (49%), Gaps = 9/379 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ II L + R + L+E+ P++ + T++ G+ A++
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT----YTTILHGLCYLGQLNEAIRL 360
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++E+ + V + NT++++L +++ + + F + + PN T + ++ C
Sbjct: 361 FKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDA-MEFLSEMVDRGIPPNAVTYSTILHGFC 419
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ A ++ EM ++PN +T + ++ G G + A+ VF + ++G P+
Sbjct: 420 NLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIY 479
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY LM+GY ++ +A KV + M G P+ +Y ++I +C ++ +A+ LL M
Sbjct: 480 TYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQM 539
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+K P++ ++ LC G++ DA EL+K++ +P S +++ LCK G +
Sbjct: 540 SVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHL 599
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA KLF + + P ++ Y LI GM +L A L+ + G++P TYN++
Sbjct: 600 DEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVM 659
Query: 436 IQGFCKIGNAKEGIRILEE 454
I+G K G + E + +
Sbjct: 660 IKGLLKEGLSDEAYELFRK 678
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 2/307 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++II L + R + L+E+ I + T++ + G+ + A + F +
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDR-GIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
NV + + + L++ L Q +F+ K V PN++T N L+ C +
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK-GVEPNIYTYNALMNGYCLRCK 493
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A +V + M G P+L ++ ++ GY ++ AK + + + P+ TY
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+M G +GRL DA ++ +M +G+ P +TY +++ CK EA L M ++K
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P L +I+ + GK+E A L+ +L P + +I L KEG EA
Sbjct: 614 LEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAY 673
Query: 381 KLFDEFE 387
+LF +++
Sbjct: 674 ELFRKWK 680
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 221/436 (50%), Gaps = 19/436 (4%)
Query: 25 SLSTITVTPPIKPWPQRLYPKRLVSMIFRQ--QNLDLALQIFHYAGKFHPNFSHNYDTYH 82
+L+ +P I+ PQ LV+ I ++ + ALQ F+ HP++SH+ +Y
Sbjct: 53 ALAQTLHSPTIQWTPQ------LVNTILKRLWNDGPKALQFFNLLSH-HPSYSHHPSSYD 105
Query: 83 SIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK 142
I AR R ++ SL+ ++ + + F + Y AG+P AVK FL + +
Sbjct: 106 HAIDISARLRDSPSLRSLVYRMR-SARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQ 164
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
F + ++S NT+L+ L ++KR ++ + +FK + KF+ + + N+++ C
Sbjct: 165 FGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRA--DCVSYNVMVNGWCLIKRTN 222
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+ +L EM G+ PNL ++ T+L GY G I A F ++ R D TYT ++
Sbjct: 223 KALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVI 282
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
G+ G + A KV D M GV P+ TY I+ CK A + ++M+ + YV
Sbjct: 283 HGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYV 342
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+S VI LC G++E A E R+ C P+ + +I + C EG+I +A L
Sbjct: 343 PNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDL 402
Query: 383 FDEFERGS-IPSLLTYNTLIAGMC---ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
F + G +P+L TYN LI+ M +S +L AG L +MV++G P FT+N ++ G
Sbjct: 403 FQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNG 462
Query: 439 FCKIGN---AKEGIRI 451
GN AKE +R+
Sbjct: 463 LLLTGNQGFAKEILRL 478
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 153/320 (47%), Gaps = 14/320 (4%)
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M S + P T I Y G A +VF + G D ++ ++D K
Sbjct: 126 RMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSK 185
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R+ A + + + V+Y VM+ +C K++ +A +L +M++R P+
Sbjct: 186 RVEMAYNLFKVFKGK-FRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYN 244
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
++ G++ +A + + + +++C D +T+IH G+I A+K+FD ++
Sbjct: 245 TMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK 304
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +PS+ TYN I +C+ + A ++++MV KG PN TYN++I+G C G +
Sbjct: 305 GVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERA 364
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES----DSWNFL 504
+ + M D GC PN +++L+I +EGE+ K + + S + D++N L
Sbjct: 365 MEFMGRMKDDGCEPNVQTYNLVIRYF---CDEGEIDKALDLFQKMTSGDCLPNLDTYNIL 421
Query: 505 LTRIVSDLDSGAGALDELLV 524
++ + S D+LLV
Sbjct: 422 ISAMFVRKKS-----DDLLV 436
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 106/237 (44%), Gaps = 3/237 (1%)
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+Y I+ + + S R+L+ M + P+ + + GK A +++ +
Sbjct: 103 SYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSM 162
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELT 411
+ C D +TI+ LCK ++ A LF F+ ++YN ++ G C
Sbjct: 163 HQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTN 222
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A + +MV++G+ PN+ +YN +++G+ + G E EM + C + +++ +I
Sbjct: 223 KALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVI 282
Query: 472 EGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVS--DLDSGAGALDELLVK 525
G +G KV G + S ++N + + ++D+ +E++VK
Sbjct: 283 HGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVK 339
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 194/342 (56%), Gaps = 2/342 (0%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+++V + +++ L + R F + K VPN +T N+LI CK V A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+L EM G+ PN+VT++T++ G+ + ++ A ++F +++ G +P+ TY L+ G
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+ G + +A +++DEM + G++P++ +Y ++ CK K A + +D P
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+I LC+ G++++AC+L++++ +C PD + ++ LCK ++ EA+++ +
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 386 FE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
E R P+++TY++LI G+C++ ++ +A ++ M+ +G+EPNV TYN LI GFC
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ ++EEM GC P+ +++ LI+GL ++G E ++
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 205/409 (50%), Gaps = 9/409 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
+ N TY ++IH R D L ++ +N P + L + RN G
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN----GLM 128
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A + + + +Q S +TL+ L + + D+ +F+++ + P+V +
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG-DCPPDVVAYST 187
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK ++ A ++ ++M P++VT T ++ G ++ A++V + DR
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TY+ L+DG K G++ DA +V M G+EPN VTY +I FC A
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L+++M +P +ID LC+ G+ +A L+ + K C PD S +I
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK +I A+ LFD+ ++ +P ++T++TL+ G C + + +A RL ++MV P+V
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+TY L+ GFCK+G E R+L+ M +GC PN +++ LI+ +G
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 220/452 (48%), Gaps = 5/452 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
RQ +D A ++F N TY++++ L R D LL E+++ ++
Sbjct: 89 RQTKVDTAYKLFRQM--VENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG-LQP 145
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+ + T++ G+ ++A+K F + V + +TL+ L + R D +F
Sbjct: 146 DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLF 205
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ R P+V T L+ LCK D ++ A +VL+ M PN++T+++++ G
Sbjct: 206 EKMREN-SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + +A+ VF ++ RG P+ TY L+ G+ + A+ +M+EM G P+ +T
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I+ CK ++ EA L DM + P +I C+ +++ A L+ +L
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
++ +PD ST++ C G + +A++L +E P + TY +L+ G C+ +
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 444
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA R+ M ++G +PNV TY LI FC+ G ++LEEM+ G PN ++ LI
Sbjct: 445 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
G +G+ E K++ + ++D + +
Sbjct: 505 GGFCGTGDLEEARKMLERLERDENCKADMFAY 536
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 225/462 (48%), Gaps = 16/462 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIF--HYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + L++ + + +D+AL++F + G P+ Y ++I L + D
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV----AYSTLIAGLCKTGRLDE 200
Query: 97 VESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
L ++++N P++ F ++ R + A + +E N +V + +
Sbjct: 201 ACKLFEKMRENSCEPDVV----TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L++ L + + +FK + + PNV T N LI C + V+ A+ +++EM +
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVR-GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G +P+++T+ T++ G G A R+FGD+ + PD TY+ L+ G+ KL R+
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 375
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A + D+M V P+ VT+ ++E +C +A LL++M+ P ++D
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
C+ G++ +A + KR+ ++ C P+ + +I C+ GK A KL +E G P
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP 495
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDM-VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+++TY +LI G C + +L EA ++ + + ++ + ++F Y +++ G C+ G + +
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 555
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
LE + G P + LI GL + G+ +V+ T S
Sbjct: 556 LEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 169/309 (54%), Gaps = 4/309 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ NTL++ L + R + +F + + KF P+V T + LI CK + ++ A + D+
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDD 382
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M ++P++VT +T++ GY G +++A+R+ +++ PD TYT L+DG+ K+GR
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 442
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A +V+ M G +PN VTY +I+AFC+ K A LL++M+ P+
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502
Query: 331 VIDLLCEEGKVEDACELWKRLLR-KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER- 388
+I C G +E+A ++ +RL R +NC D ++ LC+ G++ A +L + ++
Sbjct: 503 LIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 562
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDM-VEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G+ P Y LI G+C+ EL +A + ++M + + PN Y +IQ + G +E
Sbjct: 563 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 622
Query: 448 GIRILEEML 456
+ +E+L
Sbjct: 623 ANALADELL 631
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 10/278 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE-LKQN--PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +I + D +L + LKQ P++ F T++ Y AG + A +
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV----TFSTLVEGYCNAGLVDDAERL 414
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + V + +L++ + R + K K PNV T LI A C
Sbjct: 415 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM-AKRGCQPNVVTYTALIDAFC 473
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI-LDRGWVPDA 255
+ A ++L+EM G+ PN++T+ +++GG+ GD+E A+++ + D D
Sbjct: 474 RAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADM 533
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y V+MDG + GR++ A+++++ ++ +G P Y +I C+GK+ G+A +L++
Sbjct: 534 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 593
Query: 316 M-LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
M L RK P++ VI L EG+ E+A L LL
Sbjct: 594 MTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 243/472 (51%), Gaps = 9/472 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
++L++ + Q + D AL++ + A +F+ + Y II KL A D ++ L+ E+
Sbjct: 42 EQLLTALREQPDPDAALRMLN-AALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEM 100
Query: 105 K-QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK--FNVQRSVRSLNTLLNALVQ 161
+ + ++K G + + + +Y + AV L + F +Q N LLN LV+
Sbjct: 101 RREGHQVKLG--VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVE 158
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ L+ ++ + + P+V T N L+KALC+ V A+ +L+EM S G+ P+
Sbjct: 159 GSKMKLLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET 217
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T TT++ G+V G IE A RV +L+ G T VL++GY KLGR+ DA+ + +
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+G EP+++TY + C+ G A ++D M+Q + P V++ LC+ G++
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
E+A + +++ + C+PD +T+I LC ++ EA L + +G P + T+N L
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ + A RL+++M G P+ TYN LI C +G + + +L++M GC
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
+ +++ +I+GL + E +V G S + ++N L+ + D
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 5/401 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+++++ L RA +L E+ + E F T+++ + G E A++ R
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAALRVKAR 241
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + ++N L+N + R D + + + F+ P+ T N + LC+
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE--PDQITYNTFVNGLCQN 299
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D V A++V+D M G P++ T+ ++ G +E AK + ++DRG +PD TT+
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ RL +A+ + ++ GV P+ T+ ++I A CK A L ++M
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC GK+ A +L K + C +TII LCK+ +I E
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++FD+ + +G + +T+NTLI G+C+ ++ +A L + M+ +G++PN TYN ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CK G+ K+ ILE M G + ++ LI GL ++G
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + NTL+ AL R + + + K V P+V+T NILI ALCK D A+R+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EM + G P+ VT+ T++ G + A + D+ G TY ++DG K
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
R+ +A +V D+M+ G+ N +T+ +I+ CK KK +A L++ M+ P++
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
++ C++G ++ A ++ + + D T+I+ LCK G+ A K+
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA-K 446
+G P+ YN ++ + + +A L+ +M E G P+ TY ++ +G C+ G K
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 654
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + EM+DKG P +SF +L EGL G
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 243/472 (51%), Gaps = 9/472 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
++L++ + Q + D AL++ + A +F+ + Y II KL A D ++ L+ E+
Sbjct: 42 EQLLTALREQPDPDAALRMLN-AALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEM 100
Query: 105 K-QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK--FNVQRSVRSLNTLLNALVQ 161
+ + ++K G + + + +Y + AV L + F +Q N LLN LV+
Sbjct: 101 RREGHQVKLG--VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVE 158
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ L+ ++ + + P+V T N L+KALC+ V A+ +L+EM S G+ P+
Sbjct: 159 GSKMKLLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDET 217
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T TT++ G+V G IE A RV +L+ G T VL++GY KLGR+ DA+ + +
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+G EP+++TY + C+ G A ++D M+Q + P V++ LC+ G++
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
E+A + +++ + C+PD +T+I LC ++ EA L + +G P + T+N L
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ + A RL+++M G P+ TYN LI C +G + + +L++M GC
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
+ +++ +I+GL + E +V G S + ++N L+ + D
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 509
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 5/401 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+++++ L RA +L E+ + E F T+++ + G E A++ R
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAALRVKAR 241
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + ++N L+N + R D + + + F+ P+ T N + LC+
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE--PDQITYNTFVNGLCQN 299
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D V A++V+D M G P++ T+ ++ G +E AK + ++DRG +PD TT+
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ RL +A+ + ++ GV P+ T+ ++I A CK A L ++M
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC GK+ A +L K + C +TII LCK+ +I E
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++FD+ + +G + +T+NTLI G+C+ ++ +A L + M+ +G++PN TYN ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CK G+ K+ ILE M G + ++ LI GL ++G
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + NTL+ AL R + + + K V P+V+T NILI ALCK D A+R+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLALRLF 414
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EM + G P+ VT+ T++ G + A + D+ G TY ++DG K
Sbjct: 415 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
R+ +A +V D+M+ G+ N +T+ +I+ CK KK +A L++ M+ P++
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
++ C++G ++ A ++ + + D T+I+ LCK G+ A K+
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA-K 446
+G P+ YN ++ + + +A L+ +M E G P+ TY ++ +G C+ G K
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 654
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + EM+DKG P +SF +L EGL G
Sbjct: 655 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 189/366 (51%), Gaps = 4/366 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S+ +L ++ + KRY V L F + NV+T N+LI
Sbjct: 58 ALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTV-LSLSRKMDSFGIPHNVYTLNVLI 116
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + V A VL ++ +G P+ + TT++ G G I A +F ++ G+
Sbjct: 117 NSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQ 176
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y L++G K G + A++++ ME +P+ V YG +I + CK ++ +A NL
Sbjct: 177 PDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNL 236
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLC 371
+M+ + P+ C ++ LC G+ + L ++ MP NAIS +T++ LC
Sbjct: 237 FSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMP-NAISLTTVVDALC 295
Query: 372 KEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG + +A + D F+ G P ++TY LI G C +E+ EA +++D MV KG PNVF
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
+YN LI G+CKI + + + EEM + PN +++ LI GL G + +
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREM 415
Query: 491 TASGSV 496
A G +
Sbjct: 416 VACGQI 421
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 198/397 (49%), Gaps = 2/397 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
++ T+I G A++ +EK N Q V TL+++L ++++ +F
Sbjct: 181 IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEM 240
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
K + PN+ TCN L+ ALC + + +L+EM ++PN ++ TT++ G
Sbjct: 241 ITK-GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM 299
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A V + G PD TYT L+DG+ + +AVKV D M G PN +Y
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNT 359
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +CK ++ +A L ++M ++K +P++ +I LC G+++DA L++ ++
Sbjct: 360 LINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACG 419
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
+PD ++ +LCK + +A L E ++ P + Y +I GMC + EL +A
Sbjct: 420 QIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDAR 479
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ ++ KG++PNV+TYN++ G CK G E ++ EM + C + +++ + +G
Sbjct: 480 DLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGF 539
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+ +++ A G S LL ++SD
Sbjct: 540 LRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD 576
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 157/328 (47%), Gaps = 15/328 (4%)
Query: 212 PSMGMV----PNL-VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
P GM+ P L + H Y+ +++A F +L P + ++
Sbjct: 26 PGTGMLSIPSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSIT 85
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K+ R + + + +M+ G+ N T V+I +FC + A ++L +L+ P +A
Sbjct: 86 KVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTA 145
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I LC EG++ +A L+ +++ + PD I +T+I+ LCK G A +L
Sbjct: 146 SFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM 205
Query: 387 ERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E+G+ P ++ Y TLI +C+ + T+A L+ +M+ KG+ PN+ T N L+ C +G
Sbjct: 206 EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEW 265
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
K +L EM+D PN S + +++ L + G + VV M SG VE D +
Sbjct: 266 KHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSG-VEPDVVTY-- 322
Query: 506 TRIV------SDLDSGAGALDELLVKNC 527
T ++ S++D D ++ K C
Sbjct: 323 TALIDGHCLRSEMDEAVKVFDMMVHKGC 350
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 114/230 (49%), Gaps = 3/230 (1%)
Query: 112 CGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
C N+F T+I Y R + A+ F + + + + + NTL++ L R
Sbjct: 350 CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAI 409
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+F+ ++ P++ T IL+ LCK ++ A+ +L + + P++ +T ++ G
Sbjct: 410 ALFREMVACGQI-PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDG 468
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G++E+A+ +F ++ +G P+ TY ++ G K G L +A K+ EM++N +
Sbjct: 469 MCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSAD 528
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
TY + + F + ++ A LL++ML R + + ++ +L ++G
Sbjct: 529 GCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 245/524 (46%), Gaps = 92/524 (17%)
Query: 44 PKRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLT 102
P L+ +F + DL L F + K HN + + ++H LA A+ ++ + +LL
Sbjct: 73 PSSLLQHLFNSEAQPDLILCYFKWTQKEFGAI-HNVEQFCRLLHLLANAKNYNKIRALLD 131
Query: 103 ELKQNPEIKCGENLF--ITVIRNYGLA---------------GRPELAVKTFLRIEKFNV 145
+N +F ++V+ ++G A G +LA++ F R +
Sbjct: 132 SFAKNAHYS-NSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGF 190
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ S S N +L +LV+ R +V ++K + ++ NV T +++I LCK + A
Sbjct: 191 RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR-RIGVNVVTFDVVINGLCKVGKFQKAG 249
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRG------------------------------- 234
V+++M + G P+++T+ TI+ GY G
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309
Query: 235 ----DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
++ AK+VF ++ +G P+ TY L++G G+L +A+ + D+M G++PN
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I FCK K EAR +LDD+ +R P+ +ID + G+++DA L
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAE 409
+L P+ + + +I C+EG + EA+KL E E G L+TYN L+ +C+ E
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489
Query: 410 LTEAGRLWDDMVEKGVEP-----------------------------------NVFTYNM 434
+A RL D+M E G+ P N+ TYN+
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNV 549
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI+GFC G +E R+L EML+KG PN+T++ +L + + E G
Sbjct: 550 LIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 213/441 (48%), Gaps = 31/441 (7%)
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
PN SH +DT I +L + + +++++ E NP ++LF + +P+
Sbjct: 42 PN-SHTFDT--PTISQLIAKQHWSKLKTIVKE--TNPS-SLLQHLFNS-------EAQPD 88
Query: 132 LAVKTFLRIEK-----FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR-------HKF 179
L + F +K NV++ R L+ L NA NK L+ KN+ H
Sbjct: 89 LILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL 148
Query: 180 KVV-----PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
V+ N ++L+ A K +++ A+ D G + ++ +L V G
Sbjct: 149 SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEG 208
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
I + V+ +++ R + T+ V+++G K+G+ A V+++M+ G P+ +TY
Sbjct: 209 RIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN 268
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I+ +CK K +A LL +M+ ++ P+ +ID C + V A ++++ + R+
Sbjct: 269 TIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
P+ +++I+ LC GK+ EA L D+ G P+++TYN LI G C+ L EA
Sbjct: 329 GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ DD+ ++G+ PNV T+N LI + K G + + MLD G PN ++++ LI G
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 474 LYESGNEGEVGKVVSMATASG 494
GN E K+ +G
Sbjct: 449 FCREGNVKEARKLAKEMEGNG 469
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 37/338 (10%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
FS + TY++II +A ++LL E+ I E F +I + A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAA 318
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K F +++ +Q +V + N+L+N L N + D L ++ + PNV T N LI
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEA-LGLQDKMSGMGLKPNVVTYNALIN 377
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CKK ++ A +LD++ G+ PN++T T++ Y G +++A + +LD G P
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ +TY L+ G+ + G + +A K+ EME NG++ + VTY ++++A CK ++ +A LL
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497
Query: 314 DDMLQRKYVPSSALCCKVIDL-----------------------------------LCEE 338
D+M + PS +ID C +
Sbjct: 498 DEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNK 557
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
GK+E+A L +L K +P+ + + ++G I
Sbjct: 558 GKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 9/309 (2%)
Query: 40 QRLYPKRLVSMIF-----RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
+R++P + I R +N+ A ++F + N TY+S+I+ L
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR--QGLQPNVVTYNSLINGLCSNGKL 350
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
D L ++ +K + +I + + A + I K + +V + NT
Sbjct: 351 DEALGLQDKM-SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L++A + R D L+ ++ V PNV T N LI C++ +V+ A ++ EM
Sbjct: 410 LIDAYGKAGRMDDAFLL-RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ +LVT+ ++ +G+ A R+ ++ + G P TY L+DGY + G T A
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAA 528
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ V ME G N VTY V+I+ FC K EA LL++ML++ +P+ + D
Sbjct: 529 LNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDE 588
Query: 335 LCEEGKVED 343
+ E+G + D
Sbjct: 589 MMEKGFIPD 597
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 220/435 (50%), Gaps = 42/435 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+++S+I A + F ++E +L ++K+ + +N FI + + YG A PE AV F R
Sbjct: 63 SFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKN-FIVMFKAYGKAHLPEKAVDLFHR 121
Query: 140 I-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN---SRHKFKVVPNVFTCNILIKA- 194
+ +F +++V+S N++LN +VQ ++ L F N + + PN T N++IKA
Sbjct: 122 MWGEFQCKQTVKSFNSVLNVIVQEGLFNRA-LEFYNHVVASKSLNIHPNALTFNLVIKAM 180
Query: 195 ----------------------------------LCKKDDVEGAIRVLDEMPSMGMVPNL 220
LCK++ ++ A+ +LDEM G PNL
Sbjct: 181 CRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNL 240
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
V ++ +GD+ A ++ ++ +G VP+ TY L+ G G+L AV ++++
Sbjct: 241 VAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQ 300
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M N PN+VT+G +I F ++ + +L + R + + + +I LC+EGK
Sbjct: 301 MVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK 360
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
A ELWK ++ K C P+ + S +I LC+EGK+ EA+ E + +G +P+ TY++
Sbjct: 361 FNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSS 420
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+ G E+ + +A +W +M N Y++LI G CK G E + + ++ML +G
Sbjct: 421 LMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRG 480
Query: 460 CFPNKTSFSLLIEGL 474
+ ++S +I G
Sbjct: 481 IKLDVVAYSSMIHGF 495
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 204/456 (44%), Gaps = 54/456 (11%)
Query: 47 LVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
++++I ++ + AL+ + H N N T++ +I + R D + E+
Sbjct: 138 VLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREI- 196
Query: 106 QNPEIKCGENLFITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN- 162
P C + + +GL R + AV ++ ++ + N L++AL +
Sbjct: 197 --PLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKG 254
Query: 163 ---KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
+ LV MF VPN T N L+ LC K +E A+ +L++M S VPN
Sbjct: 255 DLGRAAKLVDNMFLKG-----CVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPN 309
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
VT T++ G+V +G + RV + RG + Y+ L+ G K G+ A+++
Sbjct: 310 DVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWK 369
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS-------------- 325
EM G PN + Y +I+ C+ K EAR L +M + Y+P+S
Sbjct: 370 EMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAG 429
Query: 326 --------------------ALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+C + I+ LC++GK +A +WK++L + D S
Sbjct: 430 DSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYS 489
Query: 365 TIIHWLCKEGKIWEAKKLFDEFE-RGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++IH C + + KLF++ +G + P ++TYN L+ C + A + + M+
Sbjct: 490 SMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIML 549
Query: 422 EKGVEPNVFTYNMLIQGFCKIGN-AKEGIRILEEML 456
++G +P+ T ++ ++ + N ++G L+E++
Sbjct: 550 DQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELV 585
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
VI +C G V+ A E+++ + +NC PDN ST++H LCKE +I EA L DE + G
Sbjct: 176 VIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEG 235
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ P+L+ +N LI+ +C+ +L A +L D+M KG PN TYN L+ G C G ++ +
Sbjct: 236 TFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAV 295
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L +M+ C PN +F LI G G + +V+ A G
Sbjct: 296 SLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG 340
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+A T+ +++ +LG + A++V E+ P+ TY ++ CK ++ EA +L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
LD+M P+ +I LC++G + A +L + K C+P+ + ++H LC
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+GK+ +A L ++ +P+ +T+ TLI G ++ R+ + +G N +
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y+ LI G CK G + + + +EM+ KGC PN +S LI+GL G E +S
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Query: 492 ASG 494
G
Sbjct: 408 NKG 410
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 9/217 (4%)
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDM---LQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
E + VM +A+ K +A +L M Q K S V++++ +EG A E
Sbjct: 96 EKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSF--NSVLNVIVQEGLFNRALE 153
Query: 347 LWKRLLRK---NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIA 402
+ ++ N P+ + +I +C+ G + +A ++F E R P TY+TL+
Sbjct: 154 FYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMH 213
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C+ + EA L D+M +G PN+ +N+LI CK G+ ++++ M KGC P
Sbjct: 214 GLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVP 273
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
N+ +++ L+ GL G + +++ ++ V +D
Sbjct: 274 NEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPND 310
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 206/414 (49%), Gaps = 52/414 (12%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMF 172
F +I AG E A F + N+Q V + L++ L + + D++ LM
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM- 628
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
V PNV T N L+ LCK +E A + L+EM S G VP+ +T+ +++
Sbjct: 629 ----GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++A ++ ++ GW PD TY +L+DG K G+ A+ V++EM G P+ VT
Sbjct: 685 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744
Query: 293 YGVMIEAFCKGKKSGEARNLLDDM---LQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
Y +I++ CK EAR L DM + R VP+ +I+ LC+ G++++A EL +
Sbjct: 745 YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804
Query: 350 RLLRKNC---------------------------------------MPDNAISSTIIHWL 370
++RK+C PD ST+I L
Sbjct: 805 EMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK G+ EA +FD+ G +P+++TYN L+ G+C++ ++ A + + MV+KGV P+V
Sbjct: 865 CKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDV 924
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
TY++L+ FCK + E + +L M +GC PN +F+ +I+GL +S GE
Sbjct: 925 ITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEA 978
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 235/468 (50%), Gaps = 24/468 (5%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKL 88
+V ++ RL+P +++ + N +L Q + +A P F H +++ ++ L
Sbjct: 63 SVVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAAL-PGFKHTIFSFNKYLNLL 121
Query: 89 AR----ARAFDAVESLLTELKQNPEIKCGENLFITVIR-NYGLAGRPELAVKTFLRIEKF 143
+ A+A D S L P + + T++R Y G E + F RI
Sbjct: 122 VKSGSPAKAIDLFRSRLP-----PRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRS- 175
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
RSV N +L +L + +F+ + V P + T N +I LCK +++
Sbjct: 176 -SSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA 234
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+ + +E+ G P++VT+ T++ GD+E A+R+ GD+ R VP+ TY+VL++
Sbjct: 235 GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLIN 294
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVE--PNEVTYGVMIEAFCKGKKSGEA----RNLLDDML 317
G K+GR+ +A +++ EM + PN +TY ++ CK + EA R+L D L
Sbjct: 295 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 354
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P + +ID LC+ G++++AC ++ ++ +P+ + +++ LCK K+
Sbjct: 355 --RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 412
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A + + ++G P ++TY+ L+ C+++ + EA L M +G PNV T+N +I
Sbjct: 413 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472
Query: 437 QGFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G CK + E ++ ++M L G P+K ++ LI+GL+ +G G+
Sbjct: 473 DGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 223/474 (47%), Gaps = 46/474 (9%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--G 128
HP+ TY+++I L +A + L ++ C N+ + GL G
Sbjct: 248 HPDVV----TYNTLIDSLCKAGDLEEARRLHGDMSSR---SCVPNVVTYSVLINGLCKVG 300
Query: 129 RPELAVKTFLRIEK--FNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNV 185
R + A + + + +V ++ + N+ L+ L Q+ + LM +V P+
Sbjct: 301 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 360
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T + LI LCK ++ A V D+M + G VPN++T+ ++ G +E A +
Sbjct: 361 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 420
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++D+G PD TY+VL+D + K R+ +A++++ M G PN VT+ +I+ CK +
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 480
Query: 306 SGEARNLLDDM-LQRKYVPSSALCCKVIDLLCEEGK------------------------ 340
SGEA + DDM L+ VP C +ID L G+
Sbjct: 481 SGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCIN 540
Query: 341 -------VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
V A +++ R+L +PD + +I CK G +A LF+E ++ P
Sbjct: 541 GLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 600
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++T+ LI G+C++ ++ A + D M GV PNV TYN L+ G CK G +E + L
Sbjct: 601 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
EEM+ GC P+ ++ L+ L + + ++VS + G ++ ++N L+
Sbjct: 661 EEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV 714
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 227/481 (47%), Gaps = 26/481 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA----RAF 94
P + LV + +D AL++ H G + N T++SII L ++ AF
Sbjct: 428 PDVITYSVLVDAFCKASRVDEALELLH--GMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+ + + P+ K I + G AG+ E + + + + N
Sbjct: 486 QMFDDMALKHGLVPD-KITYCTLIDGLFRTGRAGQAEALLDAMPDPDTY-------AFNC 537
Query: 155 LLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+N L +K D+ L N + ++VP+ T NILI CK + E A + +EM +
Sbjct: 538 CINGL--SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 595
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+ P+++T ++ G G +E A+ + + + G P+ TY L+ G K GR+ +
Sbjct: 596 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A + ++EM +G P+ +TYG ++ A C+ ++ +A L+ ++ + P + ++D
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF----ERG 389
L + G+ E A + + ++ K PD +T+I LCK G + EA++L + R
Sbjct: 716 GLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRC 775
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE--PNVFTYNMLIQGFCKIGNAKE 447
+P+++TY+ LI G+C+ + EA L +M+ K + PN+ TYN + G CK E
Sbjct: 776 CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAE 835
Query: 448 GIRILEEMLDKG--CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFL 504
++ + D P+ +FS LI+GL + G E V A G V + ++N L
Sbjct: 836 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVL 895
Query: 505 L 505
+
Sbjct: 896 M 896
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 198/411 (48%), Gaps = 22/411 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY S+++ L RA D L++ELK +P+ + ++ +G+ E A+
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV----TYNILVDGLWKSGQTEQAITV 729
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN--SRHKFKVVPNVFTCNILIKA 194
+ V + NTL+++L + + + + SR VPNV T ++LI
Sbjct: 730 LEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLING 789
Query: 195 LCKKDDVEGAIRVLDEM--PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW- 251
LCK ++ A ++ EM S ++PN++T+ + L G + + A + + D
Sbjct: 790 LCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLR 849
Query: 252 -VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD T++ L+DG K G+ +A V D+M G PN VTY V++ CK K A
Sbjct: 850 VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAH 909
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+++ M+ + P ++D C+ V++A EL + + C P+ ++II L
Sbjct: 910 AMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGL 969
Query: 371 CKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
CK + EA ++FD+ + G P +TY TLI G+ + +A L D M + P+
Sbjct: 970 CKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PD 1025
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ +N I G K+G+ R L ML+ P+K +F++LI G ++GN
Sbjct: 1026 TYAFNCCINGLSKLGDVS---RALHRMLELELVPDKVTFNILIAGACKAGN 1073
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 197/417 (47%), Gaps = 20/417 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFH-YAGK-FHPNFSHNYDTYHSIIHKLARARAFDA 96
P + LV +++ + A+ + GK HP+ TY+++I L +A +
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV----TYNTLIDSLCKAGDLEE 760
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELA---VKTFLRIEKFNVQRSVRS 151
L ++ C N+ + GL GR + A ++ +R + +V ++ +
Sbjct: 761 ARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR-KSCDVLPNIIT 819
Query: 152 LNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
N+ L+ L Q+ + LM +V P+ T + LI LCK + A V D+
Sbjct: 820 YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G VPN+VT+ ++ G +E A + ++D+G PD TY+VL+D + K
Sbjct: 880 MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-LQRKYVPSSALCC 329
+ +A++++ M G PN VT+ +I+ CK +SGEA + DDM L+ P C
Sbjct: 940 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYC 999
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+ID L G A + LL PD + I+ L K G + A E E
Sbjct: 1000 TLIDGLFRTGWAGQA----EVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELEL- 1054
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+P +T+N LIAG C++ +A L+++MV K ++P+V T+ LI G CK G +
Sbjct: 1055 -VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 36/198 (18%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST------------------------ 365
K ++LL + G A +L++ L C P++ ST
Sbjct: 116 KYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRS 175
Query: 366 ----------IIHWLCKEGKIWEAKKLF-DEFER-GSIPSLLTYNTLIAGMCESAELTEA 413
++ LC+ G+ A ++F E R G P+++TYNT+I G+C+S EL
Sbjct: 176 SSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAG 235
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L++++VE+G P+V TYN LI CK G+ +E R+ +M + C PN ++S+LI G
Sbjct: 236 MELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLING 295
Query: 474 LYESGNEGEVGKVVSMAT 491
L + G E +++ T
Sbjct: 296 LCKVGRIDEARELIQEMT 313
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ + N I L K DV R L M + +VP+ VT ++ G G+ E A +
Sbjct: 1024 PDTYAFNCCINGLSKLGDVS---RALHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
F +++ + PD T+ L+DG K G++ +M
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 188/344 (54%), Gaps = 7/344 (2%)
Query: 181 VVPNVFTCNILIKALCKK--DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P+V+T ILI C D A VL M +G+ PN VT +T+L G + I +
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++F +++ G+ PD TY+ +++G K+G T A++++ +ME+ G +PN V Y +I+
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ CK K EA L +M+ R P+ ++ C G+ +A L+K+++ +N MP
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D + ++ L KEG I EA+ +F+ E+G P++ TYN L+ G C +++ EA +L+
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ MV KG P+V +YN+LI+G CK G E +L EM K P+ ++S L++G +
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G + K++ + G + + + IV D G LDE
Sbjct: 306 GRPQDAQKLLEEMRSYGLLP----DLMTYSIVLDGLCKQGHLDE 345
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 211/428 (49%), Gaps = 43/428 (10%)
Query: 125 GLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
GL+ + ++ AVK F + K + V + +T++N L + + + K K
Sbjct: 56 GLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEK-GCK 114
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV + +I +LCK + A+ L EM + G+ PN+VT+++IL G+ G A +
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++R +PD T+ +L+DG K G + +A V + M + GVEPN TY +++ +C
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA+ L + M+++ PS +I C+ G++++A L + K PD
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
ST++ C++G+ +A+KL +E G +P L+TY+ ++ G+C+ L EA L M
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Query: 422 E-----------------------------------KGVEPNVFTYNMLIQGFCKIGNAK 446
E KG++P+V TY ++I G K G +
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
E + +M GC PN +++++I+G +G+ G+++ G +DS F
Sbjct: 415 EACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG-FSADSSTF--- 470
Query: 507 RIVSDLDS 514
+++SDL+S
Sbjct: 471 QMLSDLES 478
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 188/342 (54%), Gaps = 4/342 (1%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV--VPNVFTCNILIKALCKKDDV 201
N++ V +L L+N + +D H F + FK+ PN T + L+ L K +
Sbjct: 5 NIRPDVYTLTILINCFCHS-NHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
A+++ DEM MG P+++T++TI+ G G A ++ + ++G P+ Y+ +
Sbjct: 64 IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+D K +T+A++ + EM + G+ PN VTY ++ FC +S EA +L M++R
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P + ++D L +EG + +A +++ ++ K P+ + ++ C + ++ EA+K
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LF+ R G PS+ +YN LI G C+S + EA L +M K + P+ TY+ L++GFC
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ G ++ ++LEEM G P+ ++S++++GL + G+ E
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDE 345
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 223/451 (49%), Gaps = 49/451 (10%)
Query: 64 FHYA-----GKFHPNFSHNYDTYHSIIHKLA-RARAFDAVESL--LTELKQNPEIKCGEN 115
FH+A F N+ T+ ++++ L+ +A+ DAV+ + ++ P++
Sbjct: 28 FHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVIT--- 84
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK------------ 163
+ T+I G +A++ ++E+ + +V +T++++L ++K
Sbjct: 85 -YSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143
Query: 164 -----------------------RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
R + +FK + V+P+ T NIL+ L K+
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER-NVMPDTVTFNILVDGLSKEGM 202
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A V + M G+ PN+ T+ ++ GY + ++ A+++F ++ +G P +Y +
Sbjct: 203 ILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNI 262
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ K GR+ +A ++ EM + P+ VTY +++ FC+ + +A+ LL++M
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG 322
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P V+D LC++G +++A EL K + P+ I + +I +C GK+ A+
Sbjct: 323 LLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAR 382
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+LF F +G P ++TY +I+G+ + EA L+ DM G PN TYN++IQGF
Sbjct: 383 ELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGF 442
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ G+ R++EEM+ +G + ++F +L
Sbjct: 443 LRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 186/366 (50%), Gaps = 39/366 (10%)
Query: 145 VQRSVRSLNTLLNALVQN-KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V V +T +NA + K D + L F K V PNV T N LI LCK +++
Sbjct: 242 VSPDVYLFSTAINAFCKGGKVEDAIQLFF--DMEKLGVSPNVVTYNNLIHGLCKHGNLDE 299
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A R ++M G+ L+T++ ++ G + A V + L++G+ P+ Y L+D
Sbjct: 300 AFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLID 359
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV- 322
GY K+G L DA+++ +M G+ PN VT +I+ FCK + +A +L++ML R +
Sbjct: 360 GYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI 419
Query: 323 ----------------------------------PSSALCCKVIDLLCEEGKVEDACELW 348
P+ L ++ LC+EGK DA ELW
Sbjct: 420 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 479
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCES 407
RLL K + ++ +IH LCK G + EA +L + ERG + +TYNTLI+G C+
Sbjct: 480 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 539
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
++ E +L +MV++G+EP+ FTYN+LI G C+IG E + + E + PN ++
Sbjct: 540 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 599
Query: 468 SLLIEG 473
++I+G
Sbjct: 600 GVMIDG 605
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 212/425 (49%), Gaps = 15/425 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N T +SII + + E +L E L + I G F T+I + R E A
Sbjct: 385 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHWLCMNSRFESA-- 440
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALV-----QNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
LR + + R++R + LL LV + K D V L F+ F N+ T N
Sbjct: 441 --LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA--NLVTTNA 496
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK +++ A+R+L +M G V + +T+ T++ G G +E ++ G+++ +G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY +L+ G ++G+L +AV + +E + + PN TYGVMI+ +CK K E
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L ++L + +S + +I C G +A +L + K P A S++IH +
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C G++ +AK L DE + G +P+++ Y LI G C+ ++ + + +M + PN
Sbjct: 677 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 736
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TY ++I G+ K G+ K ++L EM+ KG P+ ++++L G + G E K+
Sbjct: 737 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDY 796
Query: 490 ATASG 494
+ G
Sbjct: 797 MSQEG 801
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 189/361 (52%), Gaps = 13/361 (3%)
Query: 151 SLNTLLNALVQNKRYD-----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ T+++ L N R++ L ++ +N R PN L+ LCK+ A+
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMR------PNDGLLTTLVGGLCKEGKHSDAV 476
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+ + G NLVT ++ G G+++ A R+ +L+RG+V D TY L+ G
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 536
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K G++ + K+ EM G+EP+ TY ++I C+ K EA NL ++ R VP+
Sbjct: 537 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 596
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ID C+ K+E+ +L+ LL +N ++ + +T+I C+ G EA KL D+
Sbjct: 597 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+G P+ TY++LI GMC + +A L D+M ++G+ PNV Y LI G+CK+G
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNF 503
+ + +L+EM PNK +++++I+G +SG+ K++ G V ++ ++N
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 776
Query: 504 L 504
L
Sbjct: 777 L 777
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 181/376 (48%), Gaps = 44/376 (11%)
Query: 172 FKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
F+N+ F+ V P V TC L+ +L K +++E + V + M G+ P++ +T
Sbjct: 193 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFST 251
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+ + G +E+A ++F D+ G P+ TY L+ G K G L +A + ++M +G
Sbjct: 252 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 311
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V +TY V+I K +K EA ++L + L++ + P+ + +ID C+ G + DA
Sbjct: 312 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 371
Query: 346 ELWKRLLRKNCMPD----NAI-------------------------------SSTIIHWL 370
+ ++ K P+ N+I +TIIHWL
Sbjct: 372 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 431
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C + A + E R P+ TL+ G+C+ + ++A LW ++EKG N+
Sbjct: 432 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 491
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
T N LI G CK GN +E +R+L++ML++G +K +++ LI G + G E K+
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551
Query: 490 ATASGSVESDSWNFLL 505
G +E D++ + L
Sbjct: 552 MVKQG-IEPDTFTYNL 566
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 160/339 (47%), Gaps = 3/339 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F N T +++IH L + LL ++ + + + + T+I G+ E
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV-LDKITYNTLISGCCKEGKVEEG 545
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K + K ++ + N L++ + + + D ++ + + +VPNV+T ++I
Sbjct: 546 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR-DLVPNVYTYGVMID 604
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK D +E ++ E+ + + N V + T++ Y G+ A ++ D+ +G P
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 664
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY+ L+ G +GR+ DA ++DEM G+ PN V Y +I +CK + + N+L
Sbjct: 665 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 724
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M P+ +ID + G ++ A +L ++ K +PD + + + CKE
Sbjct: 725 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 784
Query: 374 GKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELT 411
GKI E K+ D + +P +TY TL+ G + + LT
Sbjct: 785 GKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALT 823
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 322 VPSSALCCKVIDLL----CEEGK---VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
V S + +DLL C + + +A +++ L K P + ++ L K
Sbjct: 167 VGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKAN 226
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
++ ++ +F+ +G P + ++T I C+ ++ +A +L+ DM + GV PNV TYN
Sbjct: 227 ELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNN 286
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI G CK GN E R E+M+ G ++S+LI GL + E V+ G
Sbjct: 287 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 346
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N TY +I +A + E L TEL QN E+ ++ T+IR Y G A K
Sbjct: 595 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN--SVVYNTLIRAYCRNGNTVEAFK 652
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + + + ++L++ + R + + R K ++PNV LI
Sbjct: 653 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR-KEGLLPNVVCYTALIGGY 711
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++ + VL EM S + PN +T+T ++ GY GD++ A ++ +++ +G VPD
Sbjct: 712 CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 771
Query: 256 TTY-----------------------------------TVLMDGYIKLGRLTD 273
TY T L+ G+ + LT+
Sbjct: 772 VTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTN 824
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 205/392 (52%), Gaps = 6/392 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + N + SV L ++ + K+Y + N F V NV++ N+LI
Sbjct: 80 ALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSA-VSLCNQMDLFGVTHNVYSLNVLI 138
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+ V+ A+ V+ +M +G+ P+ +T T++ G G I+ A +F +++ G
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ +Y +++G K G AV+V +ME N +PN VTY +I++ CK + EA
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M+ R P ++ C G++ +A L+K ++ +N MPD + ++ LCK
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK 318
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + EA+ + + E+G+ P+ TYN L+ G C ++ EA ++ M+ KG PN+ +
Sbjct: 319 EGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN+LI G+CK E R+L EM +K P+ ++S L++GL + G E +
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438
Query: 492 ASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
+SG + + + I+ D G LDE L
Sbjct: 439 SSGLLP----DLMAYSILLDGFCKHGHLDEAL 466
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 238/508 (46%), Gaps = 41/508 (8%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
+ P P + + + I +++ A+ + + F +HN + + +I+ L R
Sbjct: 90 MNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLF--GVTHNVYSLNVLINCLCRLSHV 147
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
D S++ ++ + I+ F T+I G+ + AV F + + +V S NT
Sbjct: 148 DFAVSVMGKMFK-LGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNT 206
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
++N L +N + +F+ + PNV T N +I +LCK V A+ L EM
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQN-RGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR 265
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD-------------------- 254
G+ P++VT+ TIL G+ G + A R+F +++ R +PD
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA 325
Query: 255 ---------------ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
A TY LMDGY ++ +A+KV+ M G PN +Y ++I
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILING 385
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+CK K+ EA+ LL +M ++ P + ++ LC+ G+ +A L+K + +PD
Sbjct: 386 YCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPD 445
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
S ++ CK G + EA KL E ER P+++ Y LI GM + +L A L+
Sbjct: 446 LMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFS 505
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G+ P+++TYN++I+G K G + E +M D G P+ S++++I+G ++
Sbjct: 506 KLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQ 565
Query: 479 NEGEVGKVVS-MATASGSVESDSWNFLL 505
+ +++ M S +S ++ LL
Sbjct: 566 DSSTAIQLIDEMVGKRFSADSSTFQMLL 593
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 151/324 (46%), Gaps = 36/324 (11%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ M M P++V LG + +A + + G + + V
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L++ +L + AV VM +M G++P+ +T+ +I C K EA L ++M+
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 321 YVPS--------SALC---------------------------CKVIDLLCEEGKVEDAC 345
+ P+ + LC +ID LC++ V +A
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
E ++ + PD +TI+H C G++ EA +LF E R +P +T+N L+ G+
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ ++EA + + M EKG EPN +TYN L+ G+C E I++L M+ KGC PN
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376
Query: 465 TSFSLLIEGLYESGNEGEVGKVVS 488
+S+++LI G +S E +++S
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLS 400
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 10/244 (4%)
Query: 112 CGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
C NL + +I Y + R A + + + N+ + +TL+ L Q R
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+FK ++P++ +IL+ CK ++ A+++L EM + PN++ +T ++ G
Sbjct: 432 NLFKEMCSS-GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +E AK +F + G PD TY V++ G +K G +A + +MED+G P+
Sbjct: 491 MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPD 550
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+Y V+I+ F + + S A L+D+M+ +++ S+ ++DL E E+
Sbjct: 551 SCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL-------ESHDEIIS 603
Query: 350 RLLR 353
R +R
Sbjct: 604 RFMR 607
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 188/342 (54%), Gaps = 3/342 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V + L+ A + K+ + + + R + PN+ T N+L+ ALCK V A V
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
+ +M G PN++T +++ G+ RG++++A+++ G ++ +G P+ TY+ L+DG K
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ +A +V++EM+ +GV P+ TY +I CK K EA +L M P +
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I C+ GK+ +A + + + ++ PD +T+I LCK GKI EA+ + D+ +
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294
Query: 388 RGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+P ++TY+T+I G+C+S L EA +L D M + G P+V TY +I G CK G
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 354
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+E +L+ M GC PN +++ LI GL ++ E +V+
Sbjct: 355 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 396
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 209/420 (49%), Gaps = 15/420 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ + T+ II +A A D L + +P + + +I + A + E A
Sbjct: 21 FAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVV----TYTALIAAFARAKKLEEA 76
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+K + + ++ + N L++AL + D+V M + PNV T N
Sbjct: 77 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG-----FAPNVMTFN 131
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L+ CK+ +V+ A ++L M + GM PN+VT++ ++ G AK V ++
Sbjct: 132 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS 191
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PDA TY+ L+ G K ++ +A +++ M +G P+ V Y +I AFCK K EA
Sbjct: 192 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 251
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIH 368
+ L +M +++ P VID LC+ GK+ +A + ++ + +PD ST+I+
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVIN 311
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK + EA+KL D + G P ++TY T+I G+C+ L EA L M G P
Sbjct: 312 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
NV TY LI G CK E R++EEM + GC PN +++ ++ GL SG E ++V
Sbjct: 372 NVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLV 431
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 203/411 (49%), Gaps = 18/411 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAV 134
N TY ++I ARA+ + LL E+++ P N+ + + + G + V
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNI 190
K + + +V + N+L++ + D L+ +M PNV T +
Sbjct: 116 KKMI---EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR-----PNVVTYSA 167
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK A VL+EM + G+ P+ T++ ++ G IE A+++ + G
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD Y+ ++ + K G+L +A K + EM P+ VTY +I+ CK K EA+
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287
Query: 311 NLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+LD M + V P VI+ LC+ + +A +L R+ + C PD +TII
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347
Query: 370 LCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK G++ EA+ L +R G P+++TY TLI+G+C++ ++ EA R+ ++M G PN
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 407
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLD--KGCFPNKTSFSLLIEGLYES 477
+ TYN ++ G C G KE ++++ M D C P+ ++ ++ L S
Sbjct: 408 LVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 458
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 162/309 (52%), Gaps = 4/309 (1%)
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C D+ A+ +L+EM S G P+ THT I+ GD++ A + G P+
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT L+ + + +L +A+K+++EM + G PN VTY V+++A CK G A++++
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++ + P+ ++D C+ G V+DA +L ++ K P+ S +I LCK K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EAK++ +E + G P TY+ LI G+C++ ++ EA ++ M G P+V Y+
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+I FCK G E + L+EM + P+ +++ +I+GL + G E ++ SG
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 495 SVESDSWNF 503
V D +
Sbjct: 298 DVLPDVVTY 306
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 143/310 (46%), Gaps = 40/310 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++IH L +A + E +L + + P++ ++ ++I + +G+ A KT
Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV----VYSSIIHAFCKSGKLLEAQKT 254
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ K V + NT+++ L + + ++ + V+P+V T + +I LC
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLC 314
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K D + A ++LD M G P++VT+TTI+ G G +E A+ + + G P+
Sbjct: 315 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 374
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+ G K ++ +A +VM+EM + G PN VTY M+ C + EA+ L+ M
Sbjct: 375 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++G+ E C PD A TI++ L +
Sbjct: 435 --------------------KDGRAE-------------CSPDAATYRTIVNALMSSDLV 461
Query: 377 WEAKKLFDEF 386
EA++L ++
Sbjct: 462 QEAEQLLEQM 471
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 226/442 (51%), Gaps = 11/442 (2%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+DLA +I+ N T + +I+ L + + + +S L+++++ P++
Sbjct: 339 VDLAWEIYQEV--VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVT- 395
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T+I Y G E A + + ++ V + N ++N L + +Y L
Sbjct: 396 ---YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY-LRAKGVL 451
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ K + P+ T NIL+ C+ D++ A R+ DEMPS G+VP+LV+ + ++G
Sbjct: 452 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 511
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ A + F D+ + G PD YT+L+ G+ + G +++A+KV DEM + G + VTY
Sbjct: 512 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTY 571
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ CK K EA L +M +R P +I+ ++G + A L++ +++
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTE 412
+N PD +T+I CK ++ + +L+ D R P+ ++Y LI G C ++E
Sbjct: 632 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 691
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A RLWD+MVEKG E + T N +++G+C+ GNA + L ML KG P+ +++ LI
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751
Query: 473 GLYESGNEGEVGKVVSMATASG 494
G + N +V+ SG
Sbjct: 752 GFIKEENMDRAFALVNKMENSG 773
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 236/546 (43%), Gaps = 89/546 (16%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK-- 111
++NL L + PNF H+ ++ ++IH L R+R ++++ + + +
Sbjct: 212 RENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRV 271
Query: 112 ------------CGEN--LFITVIRNYGLA------------------------------ 127
CG N +F ++R Y A
Sbjct: 272 EIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLG 331
Query: 128 -----GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
G +LA + + + + VQ +V +LN ++NAL +N++ + + K V
Sbjct: 332 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVF 390
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N LI A C++ +E A ++D M G+ P + T+ I+ G G AK V
Sbjct: 391 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++L G PD TY +L+ + + DA ++ DEM GV P+ V++ +I K
Sbjct: 451 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 510
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+A DM P + + +I C G + +A ++ +L + C D
Sbjct: 511 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVT 570
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS---------------------------- 393
+TI++ LCKE + EA +LF E ERG P
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630
Query: 394 -------LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
++TYNTLI G C+ +E+ + LW+DM+ + + PN +Y +LI G+C +G
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 690
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
E R+ +EM++KG + + +++G +GN + + +S G V + ++N L+
Sbjct: 691 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 750
Query: 506 TRIVSD 511
+ +
Sbjct: 751 NGFIKE 756
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 207/426 (48%), Gaps = 9/426 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II+ L + + + +L E+ + +P+ L + RN + A +
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD----AERI 485
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V + S + L+ L +N D F++ ++ + P+ ILI C
Sbjct: 486 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA-GLAPDNVIYTILIGGFC 544
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A++V DEM G ++VT+ TIL G + A +F ++ +RG PD
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L++GY K G + AV + + M ++P+ VTY +I+ FCKG + + L +DM
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 664
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R+ P+ +I+ C G V +A LW ++ K +TI+ C+ G
Sbjct: 665 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 724
Query: 377 WEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A + L + +G +P +TYNTLI G + + A L + M G+ P+V TYN++
Sbjct: 725 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 784
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ GF + G +E I+ +M+++G P++++++ LI G N E +V G
Sbjct: 785 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844
Query: 496 VESDSW 501
V D +
Sbjct: 845 VPDDKF 850
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 208/429 (48%), Gaps = 63/429 (14%)
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+K +I C F +I+ + + A+ TF ++ K ++ + NTLL+ L
Sbjct: 5 IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64
Query: 164 R----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
R DL H M K PNV T L+ LC++ V A+ +LD M G+ PN
Sbjct: 65 RVSEALDLFHQMCK---------PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPN 115
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVM 278
+T+ TI+ G GD +A + + + + PD Y+ ++DG K GR TDA +
Sbjct: 116 QITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF 175
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP--------------- 323
EM+D G+ P+ VTY MI FC K EA+ LL +ML RK P
Sbjct: 176 IEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235
Query: 324 --------------SSALCCKVI------DLLCEEGKVEDACELWKRLLRKNCM------ 357
SS +C V+ D LC+ GK++DA E++K ++K+ M
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA-MQKSMMDIDATH 294
Query: 358 ------PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
PD + +I L EGK EA++L++E RG +P +TY+++I G+C+ + L
Sbjct: 295 AFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRL 354
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA +++D M K PN+ T+N LI G+CK G +G+ + EM +G N ++ L
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 471 IEGLYESGN 479
I G + GN
Sbjct: 415 IRGFRKVGN 423
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 17/321 (5%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
M N +H ++ ++++ NILIK C + A+ ++ +G P LVT T+L G
Sbjct: 1 MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+ A +F + P+ T+T LM+G + GR+ +AV ++D M ++G++PN+
Sbjct: 61 CVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWK 349
+TYG +++ CK + A NLL M + ++ P + +ID L ++G+ DA L+
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESA 408
+ K PD S +I+ C GK EA++L E R P ++T++ LI + +
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL----EEMLD------- 457
+L A L +M+ GV PNV T N L+ G C G K+ + + + M+D
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296
Query: 458 KGCFPNKTSFSLLIEGLYESG 478
G P+ ++++LI GL G
Sbjct: 297 NGVEPDVQTYNILISGLINEG 317
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 195/400 (48%), Gaps = 17/400 (4%)
Query: 70 FHPNFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
FH N T+ ++++ L R R +AV +LL + ++ ++ + + T++ G
Sbjct: 73 FHQMCKPNVVTFTTLMNGLCREGRVVEAV-ALLDRMVEDG-LQPNQITYGTIVDGMCKMG 130
Query: 129 RPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
A+ ++E+ +++ V + +++ L ++ R+ +F + K + P++ T
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK-GIFPDIVT 189
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ +I C A R+L EM + P++VT + ++ V GD+ +A+ + +++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVM 296
G P+ T L+DG G+L DA+++ M+ NGVEP+ TY ++
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I K EA L ++M R VP + +I+ LC++ ++++A +++ + K+
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ +T+I CK G + + +LF E RG + + +TY TLI G + + +
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
++ +M+ GV P+ T ++ G K+ + +LEE+
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 6/243 (2%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D ++ +L+ + +L A+ ++ G P VT+ ++ C + EA +L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M + V + L ++ LC EG+V +A L R++ P+ TI+ +CK
Sbjct: 74 HQMCKPNVVTFTTL----MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 374 GKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G A L + E S P ++ Y+ +I G+ + T+A L+ +M +KG+ P++ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y+ +I GFC G E R+L+EML + P+ +FS LI L + G+ ++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 492 ASG 494
+SG
Sbjct: 250 SSG 252
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 145/325 (44%), Gaps = 27/325 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y +II L + ++L E++ P+I + +I + +G+ A +
Sbjct: 155 YSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT----YSCMINGFCSSGKWSEAQRLL 210
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + V + + L+NALV+ N DL+ M + V PNV TCN L+
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG-----VCPNVVTCNTLLD 265
Query: 194 ALCKKDDVEGAIRVLDEMP-SM----------GMVPNLVTHTTILGGYVWRGDIENAKRV 242
LC ++ A+ + M SM G+ P++ T+ ++ G + G A+ +
Sbjct: 266 GLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEEL 325
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ ++ RG VPD TY+ +++G K RL +A ++ D M PN VT+ +I +CK
Sbjct: 326 YEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCK 385
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ L +M +R V ++ +I + G + + ++++ ++ PD
Sbjct: 386 AGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTIT 445
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE 387
++ L + ++ +A + +E +
Sbjct: 446 IRNMLTGLWSKEELKKALAMLEELQ 470
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 186/366 (50%), Gaps = 39/366 (10%)
Query: 145 VQRSVRSLNTLLNALVQN-KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V V +T +NA + K D + L F K V PNV T N LI LCK +++
Sbjct: 309 VSPDVYLFSTAINAFCKGGKVEDAIQLFF--DMEKLGVSPNVVTYNNLIHGLCKHGNLDE 366
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A R ++M G+ L+T++ ++ G + A V + L++G+ P+ Y L+D
Sbjct: 367 AFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLID 426
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV- 322
GY K+G L DA+++ +M G+ PN VT +I+ FCK + +A +L++ML R +
Sbjct: 427 GYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI 486
Query: 323 ----------------------------------PSSALCCKVIDLLCEEGKVEDACELW 348
P+ L ++ LC+EGK DA ELW
Sbjct: 487 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 546
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCES 407
RLL K + ++ +IH LCK G + EA +L + ERG + +TYNTLI+G C+
Sbjct: 547 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
++ E +L +MV++G+EP+ FTYN+LI G C+IG E + + E + PN ++
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 666
Query: 468 SLLIEG 473
++I+G
Sbjct: 667 GVMIDG 672
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 214/419 (51%), Gaps = 16/419 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N T +SII + + E +L E L + I G F T+I + R E A
Sbjct: 452 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHWLCMNSRFESA-- 507
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALV-----QNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
LR + + R++R + LL LV + K D V L F+ F N+ T N
Sbjct: 508 --LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA--NLVTTNA 563
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK +++ A+R+L +M G V + +T+ T++ G G +E ++ G+++ +G
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY +L+ G ++G+L +AV + +E + + PN TYGVMI+ +CK K E
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L ++L + +S + +I C G +A +L + K P A S++IH +
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C G++ +AK L DE + G +P+++ Y LI G C+ ++ + + +M + PN
Sbjct: 744 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 803
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
TY ++I G+ K G+ K ++L EM+ KG P+ ++++L G + G + E GK+++
Sbjct: 804 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG-KIEEGKLLA 861
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 189/361 (52%), Gaps = 13/361 (3%)
Query: 151 SLNTLLNALVQNKRYD-----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ T+++ L N R++ L ++ +N R PN L+ LCK+ A+
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREMLLRNMR------PNDGLLTTLVGGLCKEGKHSDAV 543
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+ + G NLVT ++ G G+++ A R+ +L+RG+V D TY L+ G
Sbjct: 544 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 603
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K G++ + K+ EM G+EP+ TY ++I C+ K EA NL ++ R VP+
Sbjct: 604 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 663
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ID C+ K+E+ +L+ LL +N ++ + +T+I C+ G EA KL D+
Sbjct: 664 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+G P+ TY++LI GMC + +A L D+M ++G+ PNV Y LI G+CK+G
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNF 503
+ + +L+EM PNK +++++I+G +SG+ K++ G V ++ ++N
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843
Query: 504 L 504
L
Sbjct: 844 L 844
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 181/376 (48%), Gaps = 44/376 (11%)
Query: 172 FKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
F+N+ F+ V P V TC L+ +L K +++E + V + M G+ P++ +T
Sbjct: 260 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFST 318
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+ + G +E+A ++F D+ G P+ TY L+ G K G L +A + ++M +G
Sbjct: 319 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 378
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V +TY V+I K +K EA ++L + L++ + P+ + +ID C+ G + DA
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438
Query: 346 ELWKRLLRKNCMPD----NAI-------------------------------SSTIIHWL 370
+ ++ K P+ N+I +TIIHWL
Sbjct: 439 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C + A + E R P+ TL+ G+C+ + ++A LW ++EKG N+
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
T N LI G CK GN +E +R+L++ML++G +K +++ LI G + G E K+
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618
Query: 490 ATASGSVESDSWNFLL 505
G +E D++ + L
Sbjct: 619 MVKQG-IEPDTFTYNL 633
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 147/312 (47%), Gaps = 2/312 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F N T +++IH L + LL ++ + + + + T+I G+ E
Sbjct: 554 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV-LDKITYNTLISGCCKEGKVEEG 612
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K + K ++ + N L++ + + + D ++ + + +VPNV+T ++I
Sbjct: 613 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR-DLVPNVYTYGVMID 671
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK D +E ++ E+ + + N V + T++ Y G+ A ++ D+ +G P
Sbjct: 672 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 731
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY+ L+ G +GR+ DA ++DEM G+ PN V Y +I +CK + + N+L
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 791
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M P+ +ID + G ++ A +L ++ K +PD + + + CKE
Sbjct: 792 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851
Query: 374 GKIWEAKKLFDE 385
GKI E K L ++
Sbjct: 852 GKIEEGKLLAED 863
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 322 VPSSALCCKVIDLL----CEEGK---VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
V S + +DLL C + + +A +++ L K P + ++ L K
Sbjct: 234 VGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKAN 293
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
++ ++ +F+ +G P + ++T I C+ ++ +A +L+ DM + GV PNV TYN
Sbjct: 294 ELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNN 353
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI G CK GN E R E+M+ G ++S+LI GL + E V+ G
Sbjct: 354 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 413
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 208/429 (48%), Gaps = 63/429 (14%)
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+K +I C F +I+ + + A+ TF ++ K ++ + NTLL+ L
Sbjct: 5 IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64
Query: 164 R----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
R DL H M K PNV T L+ LC++ V A+ +LD M G+ PN
Sbjct: 65 RVSEALDLFHQMCK---------PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPN 115
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVM 278
+T+ TI+ G GD +A + + + + PD Y+ ++DG K GR TDA +
Sbjct: 116 QITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF 175
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP--------------- 323
EM+D G+ P+ VTY MI FC K EA+ LL +ML RK P
Sbjct: 176 IEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235
Query: 324 --------------SSALCCKVI------DLLCEEGKVEDACELWKRLLRKNCM------ 357
SS +C V+ D LC+ GK++DA E++K ++K+ M
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA-MQKSMMDIDATH 294
Query: 358 ------PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
PD + +I L EGK EA++L++E RG +P +TY+++I G+C+ + L
Sbjct: 295 AFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRL 354
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA +++D M K PN+ T+N LI G+CK G +G+ + EM +G N ++ L
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 471 IEGLYESGN 479
I G + GN
Sbjct: 415 IRGFRKVGN 423
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 17/321 (5%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
M N +H ++ ++++ NILIK C + A+ ++ +G P LVT T+L G
Sbjct: 1 MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+ A +F + P+ T+T LM+G + GR+ +AV ++D M ++G++PN+
Sbjct: 61 CVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWK 349
+TYG +++ CK + A NLL M + ++ P + +ID L ++G+ DA L+
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESA 408
+ K PD S +I+ C GK EA++L E R P ++T++ LI + +
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL----EEMLD------- 457
+L A L +M+ GV PNV T N L+ G C G K+ + + + M+D
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296
Query: 458 KGCFPNKTSFSLLIEGLYESG 478
G P+ ++++LI GL G
Sbjct: 297 NGVEPDVQTYNILISGLINEG 317
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 194/400 (48%), Gaps = 17/400 (4%)
Query: 70 FHPNFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
FH N T+ ++++ L R R +AV +LL + ++ ++ + + T++ G
Sbjct: 73 FHQMCKPNVVTFTTLMNGLCREGRVVEAV-ALLDRMVEDG-LQPNQITYGTIVDGMCKMG 130
Query: 129 RPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
A+ ++E+ +++ V + +++ L ++ R+ +F + K + P++ T
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK-GIFPDIVT 189
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ +I C A R+L EM + P++VT + ++ V GD+ +A+ + +++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVM 296
G P+ T L+DG G+L DA+++ M+ NGVEP+ TY ++
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I K EA L ++M R VP + +I+ LC++ ++++A +++ + K+
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ +T+I CK G + + +LF E RG + + +TY TLI G + + +
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
++ +M+ GV P+ T ++ G K + +LEE+
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 6/243 (2%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D ++ +L+ + +L A+ ++ G P VT+ ++ C + EA +L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M + V + L ++ LC EG+V +A L R++ P+ TI+ +CK
Sbjct: 74 HQMCKPNVVTFTTL----MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 374 GKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G A L + E S P ++ Y+ +I G+ + T+A L+ +M +KG+ P++ T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y+ +I GFC G E R+L+EML + P+ +FS LI L + G+ ++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 492 ASG 494
+SG
Sbjct: 250 SSG 252
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 144/325 (44%), Gaps = 27/325 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y +II L + ++L E++ P+I + +I + +G+ A +
Sbjct: 155 YSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT----YSCMINGFCSSGKWSEAQRLL 210
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + V + + L+NALV+ N DL+ M + V PNV TCN L+
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG-----VCPNVVTCNTLLD 265
Query: 194 ALCKKDDVEGAIRVLDEMP-SM----------GMVPNLVTHTTILGGYVWRGDIENAKRV 242
LC ++ A+ + M SM G+ P++ T+ ++ G + G A+ +
Sbjct: 266 GLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEEL 325
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ ++ RG VPD TY+ +++G K RL +A ++ D M PN VT+ +I +CK
Sbjct: 326 YEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCK 385
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ L +M +R V ++ +I + G + + ++++ ++ PD
Sbjct: 386 AGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTIT 445
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE 387
++ L + ++ A + +E +
Sbjct: 446 IRNMLTGLWSKEELKRALAMLEELQ 470
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 226/442 (51%), Gaps = 11/442 (2%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+DLA +I+ N T + +I+ L + + + +S L+++++ P++
Sbjct: 235 VDLAWEIYQEV--VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVT- 291
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T+I Y G E A + + ++ V + N ++N L + +Y L
Sbjct: 292 ---YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY-LRAKGVL 347
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ K + P+ T NIL+ C+ D++ A R+ DEMPS G+VP+LV+ + ++G
Sbjct: 348 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 407
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ A + F D+ + G PD YT+L+ G+ + G +++A+KV DEM + G + VTY
Sbjct: 408 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 467
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ CK K EA L +M +R P +I+ ++G + A L++ +++
Sbjct: 468 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 527
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTE 412
+N PD +T+I CK ++ + +L+ D R P+ ++Y LI G C ++E
Sbjct: 528 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 587
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A RLWD+MVEKG E + T N +++G+C+ GNA + L ML KG P+ +++ LI
Sbjct: 588 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647
Query: 473 GLYESGNEGEVGKVVSMATASG 494
G + N +V+ SG
Sbjct: 648 GFIKEENMDRAFALVNKMENSG 669
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 242/546 (44%), Gaps = 89/546 (16%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK-- 111
++NL L + PNF H+ ++ ++IH L R+R ++++ + + +
Sbjct: 108 RENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRV 167
Query: 112 ------------CGEN--LFITVIRNY--------------------------------- 124
CG N +F ++R Y
Sbjct: 168 EIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLG 227
Query: 125 GLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
GL G +LA + + + + VQ +V +LN ++NAL +N++ + + K V
Sbjct: 228 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVF 286
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N LI A C++ +E A ++D M G+ P + T+ I+ G G AK V
Sbjct: 287 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV---------------- 286
++L G PD TY +L+ + + DA ++ DEM GV
Sbjct: 347 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 406
Query: 287 -------------------EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
P+ V Y ++I FC+ EA + D+ML++ V
Sbjct: 407 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 466
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF- 386
+++ LC+E + +A EL+ + + PD +T+I+ K+G + +A LF+
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 526
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+R P ++TYNTLI G C+ +E+ + LW+DM+ + + PN +Y +LI G+C +G
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 586
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
E R+ +EM++KG + + +++G +GN + + +S G V + ++N L+
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646
Query: 506 TRIVSD 511
+ +
Sbjct: 647 NGFIKE 652
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 208/426 (48%), Gaps = 9/426 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II+ L + + + +L E+ + +P+ L + RN + A +
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD----AERI 381
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V + S + L+ L +N D F++ ++ + P+ ILI C
Sbjct: 382 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA-GLAPDNVIYTILIGGFC 440
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A++V DEM G V ++VT+ TIL G + A +F ++ +RG PD
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L++GY K G + AV + + M ++P+ VTY +I+ FCKG + + L +DM
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 560
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R+ P+ +I+ C G V +A LW ++ K +TI+ C+ G
Sbjct: 561 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 620
Query: 377 WEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A + L + +G +P +TYNTLI G + + A L + M G+ P+V TYN++
Sbjct: 621 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 680
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ GF + G +E I+ +M+++G P++++++ LI G N E +V G
Sbjct: 681 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740
Query: 496 VESDSW 501
V D +
Sbjct: 741 VPDDKF 746
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 184/347 (53%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S+ LL ++ + K Y V L + F + PN++T NILI
Sbjct: 43 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTV-LSLSHQMDSFGIPPNIYTLNILI 101
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + A VL ++ +G PN+ T T++ G G I +F ++ G+
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 161
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G + A++++ ME +P+ V Y +I++ CK ++ +A NL
Sbjct: 162 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 221
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + PS +I LC + + L ++ MP+ I ST++ LCK
Sbjct: 222 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 281
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK+ EA + D +RG P+++TYN L+ G C +E+ EA +++D MV KG P+V +
Sbjct: 282 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 341
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y+ LI G+CKI ++ + + EEM K PN ++S L+ GL G
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 388
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 223/419 (53%), Gaps = 9/419 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRP 130
F N TY ++I+ L + + A LL ++Q P++ ++ ++I + +
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVV----VYTSIIDSLCKDRQV 215
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
A F + + S+ + N+L++AL + V + N K++PNV +
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL-NEMVNSKIMPNVVIFST 274
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ ALCK+ V A V+D M G+ PN+VT+ ++ G+ R +++ A +VF ++ +G
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ PD +Y+ L++GY K+ R+ A+ + +EM + PN VTY ++ C + +A
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L +M+ R +P C ++D LC+ ++++A L K + N PD I + +I +
Sbjct: 395 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 454
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G++ A+ LF +G P++ TY +I G+C+ L EA +L+ +M KG PN
Sbjct: 455 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 514
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
TYN++ +GF + GI++L+EML +G + ++ ++L+E L + G + V +++S
Sbjct: 515 CTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILS 573
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 201/394 (51%), Gaps = 2/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q V +++++L ++++ +F H+
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 228
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P++FT N LI ALC + + +L+EM + ++PN+V +T++ G +
Sbjct: 229 -GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME 287
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V ++ RG P+ TY LMDG+ + +AVKV D M G P+ V+Y +I
Sbjct: 288 AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 347
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK ++ +A L ++M +++ +P++ ++ LC G+++DA L+ ++ + +P
Sbjct: 348 GYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 407
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D ++ +LCK ++ EA L E ++ P + Y +I GMC + EL A L+
Sbjct: 408 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 467
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG+ PNV+TY ++I G C+ G E ++ EM KG PN +++L+ G +
Sbjct: 468 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 527
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ A G S + +L ++SD
Sbjct: 528 NETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 561
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 184/392 (46%), Gaps = 38/392 (9%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
++ H S + TY+S+IH L + V +LL E+ N +I +F TV+
Sbjct: 222 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV-NSKIMPNVVIFSTVVDALC 280
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
G+ A +D+V +M K V PNV
Sbjct: 281 KEGKVMEA-------------------------------HDVVDMMIKRG-----VEPNV 304
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N L+ C + +++ A++V D M G P++V+++T++ GY IE A +F +
Sbjct: 305 VTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEE 364
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ + +P+ TY+ LM G +GRL DA+ + EM G P+ V+Y ++++ CK ++
Sbjct: 365 MCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRR 424
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA LL + P + VID +C G++E A +L+ L K P+ +
Sbjct: 425 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 484
Query: 366 IIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ LC++G + EA KLF E +R G P+ TYN + G + E +L +M+ +G
Sbjct: 485 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 544
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+V T +L++ G + +IL E L
Sbjct: 545 FSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 6/309 (1%)
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+H T + +++A F +L P +T L+ K+ + + + +M
Sbjct: 26 SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G+ PN T ++I +FC ++ G A ++L +L+ + P+ A +I LC EGK+
Sbjct: 86 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
+ L+ +++ + P+ T+I+ LCK G A +L E+G+ P ++ Y ++
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ ++T+A L+ +M+ +G+ P++FTYN LI C + K +L EM++
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGA 516
PN FS +++ L + G E VV M G VE + ++N L+ + S++D
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG-VEPNVVTYNALMDGHCLRSEMDEAV 324
Query: 517 GALDELLVK 525
D ++ K
Sbjct: 325 KVFDTMVCK 333
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMF 172
+ T+I Y R E A+ F + + + + + +TL++ L R L H M
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ +P+ + IL+ LCK ++ AI +L + M P++ +T ++ G
Sbjct: 402 TRGQ-----IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 456
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G++E A+ +F ++ +G P+ TYT++++G + G L +A K+ EM+ G PN T
Sbjct: 457 AGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT 516
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++ F + ++ LL +ML R + + ++++L ++G + ++ L
Sbjct: 517 YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576
Query: 353 R 353
+
Sbjct: 577 Q 577
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 184/347 (53%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S+ LL ++ + K Y V L + F + PN++T NILI
Sbjct: 52 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTV-LSLSHQMDSFGIPPNIYTLNILI 110
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + A VL ++ +G PN+ T T++ G G I +F ++ G+
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 170
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G + A++++ ME +P+ V Y +I++ CK ++ +A NL
Sbjct: 171 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 230
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + PS +I LC + + L ++ MP+ I ST++ LCK
Sbjct: 231 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 290
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK+ EA + D +RG P+++TYN L+ G C +E+ EA +++D MV KG P+V +
Sbjct: 291 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 350
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y+ LI G+CKI ++ + + EEM K PN ++S L+ GL G
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 397
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 223/419 (53%), Gaps = 9/419 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRP 130
F N TY ++I+ L + + A LL ++Q P++ ++ ++I + +
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVV----VYTSIIDSLCKDRQV 224
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
A F + + S+ + N+L++AL + V + N K++PNV +
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL-NEMVNSKIMPNVVIFST 283
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ ALCK+ V A V+D M G+ PN+VT+ ++ G+ R +++ A +VF ++ +G
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ PD +Y+ L++GY K+ R+ A+ + +EM + PN VTY ++ C + +A
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L +M+ R +P C ++D LC+ ++++A L K + N PD I + +I +
Sbjct: 404 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 463
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G++ A+ LF +G P++ TY +I G+C+ L EA +L+ +M KG PN
Sbjct: 464 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 523
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
TYN++ +GF + GI++L+EML +G + ++ ++L+E L + G + V +++S
Sbjct: 524 CTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILS 582
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 201/394 (51%), Gaps = 2/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q V +++++L ++++ +F H+
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 237
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P++FT N LI ALC + + +L+EM + ++PN+V +T++ G +
Sbjct: 238 -GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME 296
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V ++ RG P+ TY LMDG+ + +AVKV D M G P+ V+Y +I
Sbjct: 297 AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 356
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK ++ +A L ++M +++ +P++ ++ LC G+++DA L+ ++ + +P
Sbjct: 357 GYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 416
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D ++ +LCK ++ EA L E ++ P + Y +I GMC + EL A L+
Sbjct: 417 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 476
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG+ PNV+TY ++I G C+ G E ++ EM KG PN +++L+ G +
Sbjct: 477 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 536
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ A G S + +L ++SD
Sbjct: 537 NETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 570
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 184/392 (46%), Gaps = 38/392 (9%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
++ H S + TY+S+IH L + V +LL E+ N +I +F TV+
Sbjct: 231 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV-NSKIMPNVVIFSTVVDALC 289
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
G+ A +D+V +M K V PNV
Sbjct: 290 KEGKVMEA-------------------------------HDVVDMMIKRG-----VEPNV 313
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N L+ C + +++ A++V D M G P++V+++T++ GY IE A +F +
Sbjct: 314 VTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEE 373
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ + +P+ TY+ LM G +GRL DA+ + EM G P+ V+Y ++++ CK ++
Sbjct: 374 MCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRR 433
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA LL + P + VID +C G++E A +L+ L K P+ +
Sbjct: 434 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 493
Query: 366 IIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ LC++G + EA KLF E +R G P+ TYN + G + E +L +M+ +G
Sbjct: 494 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 553
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+V T +L++ G + +IL E L
Sbjct: 554 FSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 6/309 (1%)
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+H T + +++A F +L P +T L+ K+ + + + +M
Sbjct: 35 SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G+ PN T ++I +FC ++ G A ++L +L+ + P+ A +I LC EGK+
Sbjct: 95 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
+ L+ +++ + P+ T+I+ LCK G A +L E+G+ P ++ Y ++
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ ++T+A L+ +M+ +G+ P++FTYN LI C + K +L EM++
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGA 516
PN FS +++ L + G E VV M G VE + ++N L+ + S++D
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG-VEPNVVTYNALMDGHCLRSEMDEAV 333
Query: 517 GALDELLVK 525
D ++ K
Sbjct: 334 KVFDTMVCK 342
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMF 172
+ T+I Y R E A+ F + + + + + +TL++ L R L H M
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ +P+ + IL+ LCK ++ AI +L + M P++ +T ++ G
Sbjct: 411 TRGQ-----IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 465
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G++E A+ +F ++ +G P+ TYT++++G + G L +A K+ EM+ G PN T
Sbjct: 466 AGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT 525
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++ F + ++ LL +ML R + + ++++L ++G + ++ L
Sbjct: 526 YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585
Query: 353 R 353
+
Sbjct: 586 Q 586
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 224/405 (55%), Gaps = 9/405 (2%)
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
H +++ +L ++ +FD++ +LL +LK + I F T+I+++ ++
Sbjct: 53 HPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIP-NATTFATLIQSFTNFHE----IE 107
Query: 136 TFLRI--EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
L+I + + N LNALV++ + LV ++ ++ +V +V T N+LIK
Sbjct: 108 NLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNE-GIVLDVSTFNVLIK 166
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
ALCK + AI +L+EM + G+ P+ +T TT++ G++ GD+ A ++ +L G +
Sbjct: 167 ALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLL 226
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ VL++G+ K GR+ +A++ + E+ + G P++VT+ ++ FC+ +A +++
Sbjct: 227 TNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIV 286
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D M+++ + P +I +C+ G+ E A E+ ++++ + C P+ +T+I LCKE
Sbjct: 287 DFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKE 346
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+I A L +G +P + T+NTLI G+C S A ++++M KG +P+ FTY
Sbjct: 347 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTY 406
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++LI C KE + +L+EM GC N ++ LI+GL +S
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 153/297 (51%), Gaps = 1/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T N LI ALCK++++E A + + S G++P++ T T++ G + + A +
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ ++G PD TY++L+D RL +A+ ++ EME +G N V Y +I+ CK
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A + D M SS +ID LC+ +VE+A +L +++ + PD
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++ + C+ G I +A + G P + TY TLI G+C + + A +L +
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQ 570
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
KG+ YN +IQ KEG+R+ EM++K P+ + ++ GL G
Sbjct: 571 MKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGG 627
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 213/462 (46%), Gaps = 25/462 (5%)
Query: 74 FSHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
FS + T++S+++ R A D V+ + E +P++ + ++I G
Sbjct: 259 FSPDQVTFNSLVNGFCRIGNVNDALDIVD-FMIEKGFDPDVYT----YNSLISGMCKLGE 313
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNV 185
E A++ ++ + + NTL++AL + DL ++ ++P+V
Sbjct: 314 FEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG-----LLPDV 368
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N LI+ LC + + A+ + +EM + G P+ T++ ++ + ++ A + +
Sbjct: 369 CTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKE 428
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G +A Y L+DG K R+ DA ++ D+ME GV + VTY +I+ CK K+
Sbjct: 429 MESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKR 488
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L+D M+ P ++ C G +E A ++ + + C PD T
Sbjct: 489 VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGT 548
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I LC+ G++ A KL + +G + + YN +I + E RL+ +M+EK
Sbjct: 549 LIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKS 608
Query: 425 VEPNVFTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
P+ T+ ++ +G C G +E I EML+KG P SF L EGL E +
Sbjct: 609 DPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTL 668
Query: 484 GKVVSM----ATASGSVESDSWNFLLTRIVSD-LDSGAGALD 520
++++M A S S FL R +D L + G LD
Sbjct: 669 IELINMVMEKAQMSERETSMIRGFLKIRKFNDALANLGGILD 710
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 194/425 (45%), Gaps = 10/425 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P ++ LV+ R N++ AL I + F + TY+S+I + + F+
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFM--IEKGFDPDVYTYNSLISGMCKLGEFEKAI 318
Query: 99 SLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+L ++ +C N + T+I E A + + V + NTL+
Sbjct: 319 EILQQMILR---ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
L +K D+ MF+ ++K P+ FT +ILI +LC + ++ A+ +L EM S G
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNK-GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
N V + T++ G IE+A+ +F + G + TY L+DG K R+ +A +
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+MD+M G++P++ TY ++ FC+ +A +++ M P +I LC
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
G+V+ A +L + + K + + +I L + E +LF E E+ P L
Sbjct: 555 RAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDAL 614
Query: 396 TYNTLIAGMCESA-ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T+ + G+C + EA +M+EKG+ P ++ L +G C + I ++
Sbjct: 615 THKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINM 674
Query: 455 MLDKG 459
+++K
Sbjct: 675 VMEKA 679
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 214/389 (55%), Gaps = 5/389 (1%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
I+ + L P R+ +I Q + LA++IF A + P F H+Y TYH++I KL RAR F
Sbjct: 91 IRNHSRMLTPARVHKLIASQTDALLAMEIFEVASR-QPGFKHSYSTYHTLICKLGRARQF 149
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+E L+ +++++ LF+ +I YG G P A+K F ++ +F + + N
Sbjct: 150 KTMEGLIQQMRKD-GCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNV 208
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL L+++K + +FK H+F + PN T NILI+A C D + A + ++M
Sbjct: 209 LLIVLIEHKCLETALSLFKK-LHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQ 267
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G +P++ T++ ++ G + ++ A V ++L++G+VPDA TY L++ + L +A
Sbjct: 268 GCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREA 327
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+++ +M+ G P+ + Y +I FC+ ++ +A +L DM + +P++ +++
Sbjct: 328 YRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNG 387
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
LC EGK ++A + + ++ +P +I +I LC EGK+ EA ++ + ++ P
Sbjct: 388 LCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPH 447
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T++ L+ +CE ++ TEA L D + E
Sbjct: 448 ESTWSVLLMRICEDSQ-TEARELVDKLSE 475
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 143/290 (49%), Gaps = 2/290 (0%)
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + F +L+ G+ P A + VL+ I+ L A+ + ++ + G+ PN TY ++I
Sbjct: 187 AIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIR 246
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A C K A L + M ++ +P ++ LC + +V+ A + +L K +P
Sbjct: 247 AHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVP 306
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +T+++ LC++ + EA +L + + G P ++ YNT+I G C +A ++
Sbjct: 307 DALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQIL 366
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
DM E G PN +Y L+ G C G E +EEM+ G P+ + + LLI GL
Sbjct: 367 RDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNE 426
Query: 478 GNEGEVGKVVSMATASGSVESDS-WNFLLTRIVSDLDSGAGALDELLVKN 526
G GE +V+ M T +S W+ LL RI D + A L + L ++
Sbjct: 427 GKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQTEARELVDKLSED 476
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
AI+ +M G P +L + +E A +F + + G P+ TY +L+
Sbjct: 187 AIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIR 246
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
+ +L+ A + ++M G P+ TY ++++ C+ + A +LD+ML + YVP
Sbjct: 247 AHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVP 306
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ +++ LC + + +A L ++ C PD +T+I C+EG+ +A ++
Sbjct: 307 DALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQIL 366
Query: 384 -DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
D E G +P+ L+Y TL+ G+C + EA ++M+ G P++ Y++LI G C
Sbjct: 367 RDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNE 426
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
G E +L M + P+++++S+L+
Sbjct: 427 GKVGEACEVLVMMTKQTLAPHESTWSVLL 455
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 226/442 (51%), Gaps = 11/442 (2%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+DLA +I+ N T + +I+ L + + + +S L+++++ P++
Sbjct: 78 VDLAWEIYQEV--VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVT- 134
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T+I Y G E A + + ++ V + N ++N L + +Y L
Sbjct: 135 ---YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY-LRAKGVL 190
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ K + P+ T NIL+ C+ D++ A R+ DEMPS G+VP+LV+ + ++G
Sbjct: 191 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 250
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ A + F D+ + G PD YT+L+ G+ + G +++A+KV DEM + G + VTY
Sbjct: 251 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 310
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ CK K EA L +M +R P +I+ ++G + A L++ +++
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTE 412
+N PD +T+I CK ++ + +L+ D R P+ ++Y LI G C ++E
Sbjct: 371 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 430
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A RLWD+MVEKG E + T N +++G+C+ GNA + L ML KG P+ +++ LI
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490
Query: 473 GLYESGNEGEVGKVVSMATASG 494
G + N +V+ SG
Sbjct: 491 GFIKEENMDRAFALVNKMENSG 512
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 179/353 (50%), Gaps = 2/353 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G +LA + + + + VQ +V +LN ++NAL +N++ + + K V P+V
Sbjct: 75 VGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDVV 133
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI A C++ +E A ++D M G+ P + T+ I+ G G AK V ++
Sbjct: 134 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 193
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L G PD TY +L+ + + DA ++ DEM GV P+ V++ +I K
Sbjct: 194 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 253
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A DM P + + +I C G + +A ++ +L + C+ D +TI
Sbjct: 254 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 313
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
++ LCKE + EA +LF E ERG P T+ TLI G + + +A L++ M+++ +
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+P+V TYN LI GFCK ++ + +M+ + +PN S+ +LI G G
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 426
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 201/381 (52%), Gaps = 6/381 (1%)
Query: 135 KTFLR-IEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
K+FL +E+ V V + NTL+NA Q + LM S K P VFT N +I
Sbjct: 117 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK--PCVFTYNAII 174
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK A VLDEM +GM P+ T+ +L ++ +A+R+F ++ +G V
Sbjct: 175 NGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 234
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD +++ L+ K G L A+K +M++ G+ P+ V Y ++I FC+ EA +
Sbjct: 235 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 294
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
D+ML++ V +++ LC+E + +A EL+ + + PD +T+I+ K
Sbjct: 295 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 354
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+G + +A LF+ +R P ++TYNTLI G C+ +E+ + LW+DM+ + + PN +
Sbjct: 355 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 414
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y +LI G+C +G E R+ +EM++KG + + +++G +GN + + +S
Sbjct: 415 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474
Query: 492 ASGSV-ESDSWNFLLTRIVSD 511
G V + ++N L+ + +
Sbjct: 475 LKGIVPDGITYNTLINGFIKE 495
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 208/426 (48%), Gaps = 9/426 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II+ L + + + +L E+ + +P+ L + RN + A +
Sbjct: 169 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD----AERI 224
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V + S + L+ L +N D F++ ++ + P+ ILI C
Sbjct: 225 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA-GLAPDNVIYTILIGGFC 283
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A++V DEM G V ++VT+ TIL G + A +F ++ +RG PD
Sbjct: 284 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 343
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L++GY K G + AV + + M ++P+ VTY +I+ FCKG + + L +DM
Sbjct: 344 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 403
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R+ P+ +I+ C G V +A LW ++ K +TI+ C+ G
Sbjct: 404 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 463
Query: 377 WEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A + L + +G +P +TYNTLI G + + A L + M G+ P+V TYN++
Sbjct: 464 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 523
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ GF + G +E I+ +M+++G P++++++ LI G N E +V G
Sbjct: 524 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583
Query: 496 VESDSW 501
V D +
Sbjct: 584 VPDDKF 589
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 183/401 (45%), Gaps = 74/401 (18%)
Query: 112 CGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
CG N +F ++R Y A + + F ++ + S+ + N+LL LV+ DL
Sbjct: 23 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+++ V NV+T NI+I ALCK
Sbjct: 83 EIYQEVVRS-GVQVNVYTLNIMINALCKNQK----------------------------- 112
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
IEN K D+ ++G PD TY L++ Y + G L +A ++MD M G++P
Sbjct: 113 ------IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 166
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL-------CCK------------ 330
TY +I CK K A+ +LD+ML+ P +A CC+
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 226
Query: 331 ----------------VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+I LL + G ++ A + ++ + PDN I + +I C+ G
Sbjct: 227 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 286
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ EA K+ DE E+G + ++TYNT++ G+C+ L+EA L+ +M E+GV P+ +T+
Sbjct: 287 VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 346
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
LI G+ K GN + + + E M+ + P+ +++ LI+G
Sbjct: 347 TLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 387
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 156/301 (51%), Gaps = 5/301 (1%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A RVL S G+ ++ ++LGG V G ++ A ++ +++ G + T ++++
Sbjct: 49 AFRVL---KSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMIN 105
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
K ++ + + +ME+ GV P+ VTY +I A+C+ EA L+D M + P
Sbjct: 106 ALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKP 165
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+I+ LC+ GK A + +L+ PD A + ++ C+ + +A+++F
Sbjct: 166 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 225
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
DE +G +P L++++ LI + ++ L +A + + DM G+ P+ Y +LI GFC+
Sbjct: 226 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWN 502
G E +++ +EML++GC + +++ ++ GL + E ++ + T G V D +
Sbjct: 286 GVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG-VFPDFYT 344
Query: 503 F 503
F
Sbjct: 345 F 345
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 210/419 (50%), Gaps = 19/419 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESL--LTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
F NY+ HS+ DAV S L ++ P + L ++++ +
Sbjct: 40 FCSNYNNLHSVA---------DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVIS 90
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV--VPNVFTCN 189
L + L N++ +V +L L+N L + R D VH F FK+ P T
Sbjct: 91 LCKQMDLS----NIRPNVYTLTILINCLCHSNR-DHVHFAFSALGKMFKLGLQPTHVTFG 145
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L+ LC K + A+++ DE+ MG P+L+T+TTI+ G G NA ++ + ++
Sbjct: 146 TLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEK 205
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD Y ++D K R +A+ EM D G+ PN VTY ++ FC + EA
Sbjct: 206 GCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEA 265
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L M+ R +P++ ++D LC+EG + +A +++ + PD S ++
Sbjct: 266 TSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDG 325
Query: 370 LCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
C + ++ EA+KLFD +G PS+ YN LI G C+S L EA L +M ++ + P+
Sbjct: 326 YCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPD 385
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
TY+ L+QGFC+ G + ++ +EM G P+ ++S+L++GL + G+ E +++
Sbjct: 386 TVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLL 444
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 197/391 (50%), Gaps = 3/391 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I+ G A++ ++E+ + V + NT++++L +++R + F
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ + PNV T + ++ C + A + +M ++PN VT T ++ G G I
Sbjct: 239 DQ-GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMI 297
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+RVF + + G PDA TY+ LMDGY ++ +A K+ D M G P+ Y ++
Sbjct: 298 LEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNIL 357
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I CK ++ EA+ LL +M R P + ++ C+ G+ + A +L+K +
Sbjct: 358 INGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL 417
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
+PD+ S ++ LCK G + EA +L + I P + YN LI GMC +L A
Sbjct: 418 LPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARE 477
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ ++ KG++P+V TY ++I G K G + E + +M+ GC PN ++++ I+G
Sbjct: 478 LFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL 537
Query: 476 ESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
+G+ +++ G S +S ++ LL
Sbjct: 538 RNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 193/374 (51%), Gaps = 6/374 (1%)
Query: 125 GLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKV 181
GL + ++ AVK F I K S+ + T++ L + + + L+ K K
Sbjct: 150 GLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK- 208
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P+V N +I +LCK A+ EM G+ PN+VT+++IL G+ G + A
Sbjct: 209 -PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATS 267
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F ++ R +P+ T+T+L+DG K G + +A +V + M +NGVEP+ TY +++ +C
Sbjct: 268 LFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYC 327
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ EA+ L D M+ + + PS + +I+ C+ ++ +A L + ++ PD
Sbjct: 328 LQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
ST++ C+ G+ A+KLF E G +P +TY+ L+ G+C+ L EA RL M
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM 447
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
E +EP++ YN+LIQG C G + + + KG P+ +++++I GL + G
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLS 507
Query: 481 GEVGKVVSMATASG 494
E ++ +G
Sbjct: 508 NEACEMFRKMVVNG 521
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 218/424 (51%), Gaps = 11/424 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--F 117
A+++F GK F+ + TY +II L + + L LK+ E C ++ +
Sbjct: 160 AVKLFDEIGKM--GFAPSLITYTTIIKGLCK---IGHTTNALQLLKKMEEKGCKPDVVAY 214
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
TVI + R A+ F + + +V + +++L+ + + +FK
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V+PN T IL+ LCK+ + A RV + M G+ P+ T++ ++ GY + ++
Sbjct: 275 R-NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMD 333
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+++F ++ +G+ P Y +L++G+ K RL +A ++ EM D + P+ VTY ++
Sbjct: 334 EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLM 393
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ FC+ + A+ L +M +P S ++D LC+ G +++A L K +
Sbjct: 394 QGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE 453
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P I + +I +C GK+ A++LF F +G PS++TY +I+G+ + EA +
Sbjct: 454 PHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEM 513
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ MV G PN TYN+ IQGF + G+ +R++EEM+ +G + ++F +L++ E
Sbjct: 514 FRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD--LE 571
Query: 477 SGNE 480
S +E
Sbjct: 572 SNDE 575
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 54 QQNLDLALQIFH-YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
Q +D A ++F GK F+ + Y+ +I+ ++R + ++LL+E+ + ++
Sbjct: 329 QSQMDEAQKLFDIMVGK---GFAPSVRVYNILINGHCKSRRLNEAKTLLSEM-YDRDLTP 384
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+ T+++ + AGRP++A K F + + +
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL--------------------------- 417
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+P+ T +IL+ LCK ++ A R+L M + P++ + ++ G
Sbjct: 418 ---------LPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G +E A+ +F ++ +G P TYTV++ G +K G +A ++ +M NG PN T
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V I+ F + A L+++M+ R + S+ ++DL E E+ R +
Sbjct: 529 YNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL-------ESNDEIISRFM 581
Query: 353 RKN 355
R++
Sbjct: 582 RRS 584
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 236/519 (45%), Gaps = 85/519 (16%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TYH +I L + D ++L + K PE+ +++ + R + GR + A++
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEV----SVYTILTRAFCKTGRLKDALEI 217
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F I + + N +++ + D L F ++ KV P+VFT NILI LC
Sbjct: 218 FRNIPSPDAI----AYNAIIHGHCRKNDCDGA-LEFLKEMNERKVAPDVFTYNILIDGLC 272
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG---------------------- 234
K + A +L EM G+ P+ VT +I+ G G
Sbjct: 273 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 332
Query: 235 -------------DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+++ AK + + + G+VPD TY++L DG K GR+ +A +++ EM
Sbjct: 333 TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G PN VTY +I+ CK K+ +A LL+ ++ +VP ++D LC+EG++
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-------------- 387
+ A ++ + +L++ C P + ++ LC+ G++ EA +F E
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512
Query: 388 --------------------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
RG+ P + YN L+ G C+ L E +++DM +G P
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIRGT-PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP 571
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N+ TYN+++ G CK G E LE M GC P+ S++++I+GL+++ E +V+
Sbjct: 572 NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 631
Query: 488 SMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELL 523
+G ++ ++N L+ + + D G L ++
Sbjct: 632 DQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 670
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 186/370 (50%), Gaps = 6/370 (1%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
P+ A+ F+ + S + N L L++N D + MF+ P+ +T +
Sbjct: 106 PQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA-GYAPDSYTYH 164
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
++IK+LC+ + ++ A +LD+ G P + +T + + G +++A +F +I
Sbjct: 165 LVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS- 223
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
PDA Y ++ G+ + A++ + EM + V P+ TY ++I+ CK K+ +A
Sbjct: 224 ---PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKA 280
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L +M+ R P + ++D LC+ GK E A L + +NC P +T+I
Sbjct: 281 SEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK+ + AK L DEF G +P ++TY+ L G+C+ + EA L +M KG PN
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+ TYN LI G CK ++ +LE ++ G P+ +++++++GL + G + K+V
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460
Query: 489 MATASGSVES 498
G S
Sbjct: 461 GMLKRGCTPS 470
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 225/496 (45%), Gaps = 13/496 (2%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
++ W L P + ++ R ++ A+ F +AG F H+ T + + L +
Sbjct: 84 LEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGD--RGFKHSTFTRNCFLQTLLENGSS 141
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
D + ++ E + + VI++ + + A + + + V
Sbjct: 142 DRIPAMF-ERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTI 200
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L A + R +F+N P+ N +I C+K+D +GA+ L EM
Sbjct: 201 LTRAFCKTGRLKDALEIFRNIPS-----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNER 255
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
+ P++ T+ ++ G + A + +++DRG PD T+ +MDG K G+ A
Sbjct: 256 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 315
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ M + P+ TY +I CK + A++L+D+ + +VP + D
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
LC+ G++++A EL K + K C P+ +T+I LCK K +A +L + G +P
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TY ++ G+C+ L +A ++ + M+++G P+V TY L++G C+ G E I +
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD-- 511
EM+ K C + ++ L+ G +S E KVV G+ D +N L+ +
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--GIRGTPYIDVYNALMDGYCKEGR 553
Query: 512 LDSGAGALDELLVKNC 527
LD +++ + C
Sbjct: 554 LDEIPNVFEDMACRGC 569
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 224/493 (45%), Gaps = 47/493 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V + ++ LD AL++ G + + TY +++ L R D + E+
Sbjct: 442 IVDGLCKEGRLDKALKMVE--GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM-V 498
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + +++++ Y + R + A K ++ + N L++ + R D
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKV---VDGIRGTPYIDVYNALMDGYCKEGRLD 555
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ +F++ + VPN+ T NI++ LCK V+ A L+ M S G VP++V++ I
Sbjct: 556 EIPNVFEDMACR-GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 614
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G + A++V ++ G PDA TY LM + K R DAV ++ M GV
Sbjct: 615 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 674
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK-VIDLLCEEGKVEDAC 345
+P+ VTY +I + + G+A L+ +ML+ V S+ +ID LC+EG ++ A
Sbjct: 675 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 734
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMC 405
L + + + I LCKEG++ EA L E + ++ ++Y T+I G+C
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD--TLRDEVSYTTVIIGLC 792
Query: 406 ESAELTEAGRLWDDMV------------------------------------EKGVEPNV 429
++ +L A +L +MV ++G P+V
Sbjct: 793 KAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSV 852
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-S 488
TYNM+I CK+ + + +EM +G + S+++LI GL G E +V+
Sbjct: 853 ITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEE 912
Query: 489 MATASGSVESDSW 501
MA++ ++ W
Sbjct: 913 MASSDCEIDDLKW 925
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 205/437 (46%), Gaps = 20/437 (4%)
Query: 77 NYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N TY+++I L +A +A++ +ESL++ P++ + ++ GR +
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSS-GFVPDVV----TYTIIVDGLCKEGRLDK 454
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+K + K SV + L+ L + R D H +FK K + L+
Sbjct: 455 ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK-DCTADALAYVSLV 513
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK + A +V+D + P + + ++ GY G ++ VF D+ RG V
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCV 570
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY ++MDG K G++ +A ++ M G P+ V+Y ++I+ K K EAR +
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 630
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
LD M+Q P + ++ C+E + +DA + K +++ PDN +T+I L +
Sbjct: 631 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 690
Query: 373 EGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
++ +A +L E R + + TYNT+I +C+ L +A L D M GVE N
Sbjct: 691 TNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 750
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SM 489
TYN+ I CK G E +L EM ++ S++ +I GL ++ K+ M
Sbjct: 751 TYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 807
Query: 490 ATASG-SVESDSWNFLL 505
G + S ++N L+
Sbjct: 808 VAVKGLCITSHTFNLLI 824
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 34/207 (16%)
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL--LCEEGK-VEDACELWK---- 349
I+ GK SG L RK S +L V+DL L + G + + E W+
Sbjct: 33 IQVSTDGKSSGIPHRQLHLSTARKLARSESLQQDVLDLLGLLQSGSNIRERLEQWRGTLQ 92
Query: 350 -----RLLRKNCMPDNAI-----------------SSTIIHWLCKEGKIWEAKKLFDE-F 386
R+L++ P AI + + L + G +F+
Sbjct: 93 PAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERML 152
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ G P TY+ +I +C+ ++ +A + D +G +P V Y +L + FCK G K
Sbjct: 153 DAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLK 212
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ + I + P+ +++ +I G
Sbjct: 213 DALEIFRNIPS----PDAIAYNAIIHG 235
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 227/477 (47%), Gaps = 48/477 (10%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR----AFDAV 97
L P + ++ + +LD A++ F + P + H+ T + ++ R + A+D
Sbjct: 97 LVPSVVGRVLQQLDDLDKAVKFFDWCTG-QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLF 155
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
++ L I + T+I + A + A + +EK + NT++
Sbjct: 156 KNHRCGLCSPDSIT-----YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIK 210
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L N R D + +++ + P+V T IL+ ALCK + A +L++M G
Sbjct: 211 GLCDNGRVDSALVHYRDMQRN--CAPSVITYTILVDALCKSARISDASLILEDMIEAGCA 268
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN+VT+ T++ G+ G+++ A +F +L+ PD TY +L+DGY K R D K+
Sbjct: 269 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 328
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+ EM G EPN +TY ++++ K K +A NL ML+R PS +ID+ C+
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
G+++ A EL++ + + C+PD + +I C+ +I +A++L + E G P ++T
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448
Query: 397 YN-----------------------------------TLIAGMCESAELTEAGRLWDDMV 421
YN TLI G+C+S L +A +L +M
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G P+V Y +LI GFCK + + EMLDKGC P ++S++I+ L +S
Sbjct: 509 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 210/435 (48%), Gaps = 40/435 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N TY+++I+ + D L ++ +N C ++F +I Y RP+
Sbjct: 270 NVVTYNTLINGFCKLGNMDEAVVLFNQMLEN---SCSPDVFTYNILIDGYCKQERPQDGA 326
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMF----KNSRHKFKV----- 181
K + K+ + + + NTL+++LV++ +Y +L +M K S F +
Sbjct: 327 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386
Query: 182 ---------------------VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+P+++T NI+I C+ + ++ A ++L+ M G P++
Sbjct: 387 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 446
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ +I+ G ++ A V+ + + G+ D T + L+DG K RL DA K++ E
Sbjct: 447 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
ME NG P+ V Y ++I FCK + ++ +ML + VP+ VID LC+ +
Sbjct: 507 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNT 399
V D C L K +L + PD + +++I LCK EA +L+ ++ G P+++TYN
Sbjct: 567 VRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNV 626
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+ +C+ + L EA L + M G P+ TYN + GF K + R+ + M +G
Sbjct: 627 LVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686
Query: 460 CFPNKTSFSLLIEGL 474
C P +SLL+ L
Sbjct: 687 CSPTPFMYSLLLTKL 701
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/573 (22%), Positives = 238/573 (41%), Gaps = 114/573 (19%)
Query: 47 LVSMIFRQQNLDLALQIF--HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+S R++ A +F H G P+ TY ++I+ +AR F LL E+
Sbjct: 138 LLSAFVRKKKAQEAYDLFKNHRCGLCSPDSI----TYSTLINGFCKARDFQQAYRLLDEM 193
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
++ + ++ T+I+ GR + A+ + +++ N SV + L++AL ++ R
Sbjct: 194 EKRGIVP-HNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSAR 251
Query: 165 YDLVHLMFK----------------------------------NSRHKFKVVPNVFTCNI 190
L+ + N + P+VFT NI
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL------GGYVWR----------- 233
LI CK++ + ++L EM G PN +T+ T++ G Y+
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371
Query: 234 ------------------GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
G ++ A +F + DRG +PD TY +++ G + R+ DA
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++++ M + G P+ VTY ++ CK + EA + + + Y C +ID L
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE---------- 385
C+ +++DA +L + + R PD + +IH CK ++ ++ F E
Sbjct: 492 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551
Query: 386 --------------------------FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
ERG P + Y ++I G+C+S EA L+
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G P V TYN+L+ CK+ E I +LE M GC P+ +++ + +G ++S
Sbjct: 612 MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
+ ++ + G S ++ LLT++V++
Sbjct: 672 HDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAE 704
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 5/214 (2%)
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q Y S C ++ + K ++A +L+K C PD+ ST+I+ CK
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184
Query: 378 EAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +L DE E RG +P YNT+I G+C++ + A + DM ++ P+V TY +L+
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILV 243
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGS 495
CK + ILE+M++ GC PN +++ LI G + GN E + + M S S
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303
Query: 496 VESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ ++N L+ GA L E++ C
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 10/291 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN----PEIKCGENLFITVIRNYGLAGRPELAVK 135
TY+SI+ L +A D + L+ + C T+I + R + A K
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS-----TLIDGLCKSRRLDDAEK 502
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+E+ V + L++ + + D F K VP V T +I+I L
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK-GCVPTVITYSIVIDKL 561
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK V +L M G+ P+ + +T+++ G + A ++ + G P
Sbjct: 562 CKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTV 621
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY VL+D K+ RL +A+ +++ ME +G P+ VTY + + F K + +A L
Sbjct: 622 VTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQA 681
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
M R P+ + ++ L E K++ A E+W+ L D IS T+
Sbjct: 682 MKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 179/327 (54%), Gaps = 2/327 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K +VP +TC ++I LC+ +E A RV + M S+G+ PN V +TT++ G+V G +
Sbjct: 439 KSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQ 498
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A R+ + +G PD Y ++ G K ++ +A + EM + G++PN TYG +I
Sbjct: 499 EAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALI 558
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+CK + A +ML P+ +C +ID C+EG +A +++ +L ++
Sbjct: 559 HGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVH 618
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD S +IH L + GK+ A +L EF E+G +P + TYN++I+G C+ + +A +L
Sbjct: 619 PDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQL 678
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ M +KG+ PN+ TYN LI G CK G + + + + KG N +++ +I+G +
Sbjct: 679 HEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCK 738
Query: 477 SGNEGEVGKVVSMATASGSVESDSWNF 503
SGN + ++ T G V DS+ +
Sbjct: 739 SGNLSKAFRLFDEMTLKG-VPPDSFVY 764
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 199/375 (53%), Gaps = 10/375 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+ +I + AG + + +E+ S+ + N ++ L + ++ ++L LM
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K +V +VFT +ILI K+ A +L+EM S G+ P V +T ++ G++
Sbjct: 299 KKG-----LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMR 353
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+GD A RV ++L RG + TY L+ G K G + A +++EM G++P+ T
Sbjct: 354 QGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQT 413
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y MIE + K + + ++LL +M + VP++ C +I+ LC G +EDA +++ ++
Sbjct: 414 YNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMV 473
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELT 411
P+ I +T+I +EG+ EA ++ + +G P +L YN++I G+C+S ++
Sbjct: 474 SLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKME 533
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +M+E+G++PNV+TY LI G+CK G + R +EML G PN + LI
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALI 593
Query: 472 EGLYESGNEGEVGKV 486
+G + G+ E +
Sbjct: 594 DGYCKEGSTTEATSI 608
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 217/423 (51%), Gaps = 12/423 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENLFITVIRNYGLAGRPEL 132
N TY ++IH ++ + E+ + CG + + +I Y G
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEM-----LGCGIAPNDVVCTALIDGYCKEGSTTE 604
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A F + +V VR+ + L++ L++N + + K +VP+VFT N +I
Sbjct: 605 ATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK-GLVPDVFTYNSII 663
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK+ + A ++ + M G+ PN++T+ ++ G G+IE A+ +F I +G
Sbjct: 664 SGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLA 723
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
+A TY ++DGY K G L+ A ++ DEM GV P+ Y +I+ K + +A +L
Sbjct: 724 HNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL 783
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ +Q+ + +S+L ++D C+ GKV +A +L + ++ K+ PD+ + +I + CK
Sbjct: 784 FLESVQKGFASTSSLNA-LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCK 842
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EA++ F D +R +P+ LTY L++G + +E L+D+M+ K +EP+ T
Sbjct: 843 TGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVT 902
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
++++I K G+ + ++++++ML KG +K +LI+ L + EV KV+
Sbjct: 903 WSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIE 962
Query: 492 ASG 494
G
Sbjct: 963 EQG 965
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 200/440 (45%), Gaps = 47/440 (10%)
Query: 84 IIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF 143
II+ L R + + S + E+ + +K ++ T+I+ + GR + AV+ ++K
Sbjct: 452 IINGLCRHGSIEDA-SRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510
Query: 144 NVQRSVRSLNTLLNALVQNKRYD-----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
VQ V N+++ L ++++ + LV ++ + + PNV+T LI CK
Sbjct: 511 GVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK------PNVYTYGALIHGYCKS 564
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF--------------- 243
+++ A R EM G+ PN V T ++ GY G A +F
Sbjct: 565 GEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTY 624
Query: 244 --------------------GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+ L++G VPD TY ++ G+ K G + A ++ + M
Sbjct: 625 SALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQ 684
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G+ PN +TY +I CK + AR L D + + ++ +ID C+ G +
Sbjct: 685 KGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSK 744
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG 403
A L+ + K PD+ + S +I KEG +A LF E + S + N L+ G
Sbjct: 745 AFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDG 804
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C+S ++ EA +L +DMV+K V+P+ TY +LI CK G KE + +M + PN
Sbjct: 805 FCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPN 864
Query: 464 KTSFSLLIEGLYESGNEGEV 483
+++ L+ G +G E+
Sbjct: 865 ALTYTALLSGYNMAGRRSEM 884
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 182/363 (50%), Gaps = 2/363 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F +I Y G + AV FL ++ + N LL+ L++ + +L F N
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELF-WRFYNG 226
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ V+ +V+T LI A + + + R+L EM G P+LVT+ ++GG G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A + + +G V D TY++L+DG+ K R T+A +++EM G++P V Y
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ F + SGEA + ++ML R + ++ +C+ G +E A L ++
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAG 414
PD + +I KE K L E ++ + +P+ T +I G+C + +A
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
R+++ MV GV+PN Y LI+G + G +E +RIL+ M KG P+ ++ +I GL
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526
Query: 475 YES 477
+S
Sbjct: 527 CKS 529
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 36/300 (12%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+LI KK + A+ G V L+ +L + +E R + +L+
Sbjct: 171 LLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEA 230
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
+ D TYT L++ + + G + +++ EME+ G P+ VTY V
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNV-------------- 276
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
VI LC G+V++A EL K + +K + D S +I
Sbjct: 277 ---------------------VIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDG 315
Query: 370 LCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
K+ + EAK + +E F +G P + Y LI G + EA R+ ++M+ +GV+ N
Sbjct: 316 FGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLN 375
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+FTYN L++G CK G+ ++ +L EM+ G P+ +++ +IEG + N V ++S
Sbjct: 376 LFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLS 435
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 141/313 (45%), Gaps = 34/313 (10%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
V + CN L+ L K + +E R + M ++ ++ T+T ++ + G+ + KR
Sbjct: 198 VVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKR 257
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ ++G P TY V++ G + G + +A ++ M+ G+ + TY ++I+ F
Sbjct: 258 LLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFG 317
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K K+ EA+ +L++M + P +ID +G +A + + +L
Sbjct: 318 KQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEML--------- 368
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
RG +L TYN L+ G+C+ ++ +A L ++M+
Sbjct: 369 -------------------------ARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMI 403
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G++P+ TYN +I+G+ K N +L EM P + ++I GL G+
Sbjct: 404 MVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIE 463
Query: 482 EVGKVVSMATASG 494
+ +V + + G
Sbjct: 464 DASRVFEIMVSLG 476
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 168/386 (43%), Gaps = 10/386 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P ++S +Q + A Q+ Y + S N TY+++I+ L +A +
Sbjct: 654 PDVFTYNSIISGFCKQGGIGKAFQLHEYMCQ--KGISPNIITYNALINGLCKAGEIERAR 711
Query: 99 SLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L + P N + T+I Y +G A + F + V + L+
Sbjct: 712 ELFDGI---PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALI 768
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ + + +F S K + + N L+ CK V A ++L++M +
Sbjct: 769 DGCRKEGNTEKALSLFLESVQK--GFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P+ VT+T ++ + G ++ A++ F D+ R +P+A TYT L+ GY GR ++
Sbjct: 827 KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ DEM +EP+ VT+ VMI+A K + L+DDML++ S +C +ID LC
Sbjct: 887 LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLC 946
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLL 395
+ V + ++ +++ + A ST++ K GK+ A ++ R +P
Sbjct: 947 RKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDST 1006
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMV 421
N LI +S + AG M
Sbjct: 1007 ELNDLINVEQDSTDSENAGDFLKQMA 1032
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
V + ++I+ + K EA + + +V C ++ L + K+E +
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAE 409
+L N + D + +I+ + G E K+L F+ E+G PSL+TYN +I G+C + E
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ EA L M +KG+ +VFTY++LI GF K E +LEEM KG P +++
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 470 LIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRI--VSDLDSGAGALDELLV 524
LI+G G+ GE +V A G + ++N L+ + D++ L+E+++
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S N LL ++ + K+Y V N F + P+V+T NILI
Sbjct: 53 ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTV-FSLSNQMDSFGIPPDVYTLNILI 111
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + + A VL ++ +G P+ T TT++ G G I +A +F ++ G+
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G A++++ ME +P+ V Y +I++ CK ++ EA NL
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 231
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M+ + P +I LC + + L +++ MPD I ST++ LCK
Sbjct: 232 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 291
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGKI EA + D RG P+++TYN L+ G C +E+ EA +++D MV G PNV +
Sbjct: 292 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 351
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
YN LI G+CKI + + EEM K PN +++ L+
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 392
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 198/394 (50%), Gaps = 3/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q V +++++L ++++ +F +
Sbjct: 179 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 238
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P++FT LI +LC + + +L++M + ++P++V +T++ G I
Sbjct: 239 -GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 297
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V ++ RG P+ TY LMDG+ + +AVKV D M NG PN ++Y +I
Sbjct: 298 AHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLIN 357
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK ++ +A L ++M Q++ +P++ ++ C G+++DA L+ ++ +P
Sbjct: 358 GYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIP 416
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D A ++ +LCK+ + EA L E ++ P + Y +I GMC + EL A ++
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG+ PNV TY ++I G C+ G E ++ EM GC P+ +++ + +GL ++
Sbjct: 477 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 536
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ A G S LL ++ D
Sbjct: 537 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 213/419 (50%), Gaps = 10/419 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRP 130
F N TY ++I+ L + +A LL ++Q P++ ++ ++I + +
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV----VYTSIIDSLCKDRQV 225
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
A F ++ + + + +L+++L + V + N K++P+V +
Sbjct: 226 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL-NQMINSKIMPDVVIFST 284
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ ALCK+ + A V+D M G+ PN+VT+ ++ G+ + +++ A +VF ++ G
Sbjct: 285 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 344
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ P+ +Y L++GY K+ R+ A + +EM + PN VTY ++ C + +A
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAI 403
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L +M+ +P A ++D LC++ +++A L K + N PD I + +I +
Sbjct: 404 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 463
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G++ A+ +F +G P++ TY +I G+C L EA +L+ +M G P+
Sbjct: 464 CRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDG 523
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
TYN + QG + A I++L+EML +G + ++ +LL+E L + + V +++S
Sbjct: 524 CTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILS 582
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 145/293 (49%), Gaps = 6/293 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P + L+ K + + ++M+ G+ P+ T +
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + G A ++L +L+ + P +A +I LC EGK+ DA L+ +++ +
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P+ T+I+ LCK G A +L E+G+ P ++ Y ++I +C+ ++TEA
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ MV +G+ P++FTY LI C + K +L +M++ P+ FS +++ L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289
Query: 475 YESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGAGALDELL 523
+ G E VV M G VE + ++N L+ + S++D D ++
Sbjct: 290 CKEGKITEAHDVVDMMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 341
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 2/254 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AVK F + +V S NTL+N + +R D +F+ K +++PN T N L+
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK-ELIPNTVTYNTLM 391
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C ++ AI + EM + G +P+L T+ +L + ++ A + I
Sbjct: 392 HX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 450
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD YT+++DG + G L A + + G+ PN TY +MI C+ EA L
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M P + L + + A +L + +L + D + ++ ++ LC
Sbjct: 511 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570
Query: 373 EGKIWEAKKLFDEF 386
+ K++ EF
Sbjct: 571 DKLDQSVKQILSEF 584
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 116/265 (43%), Gaps = 5/265 (1%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q +D A+++F H ++ N +Y+++I+ + + D L E+ Q I
Sbjct: 327 QSEMDEAVKVFDTM--VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP-- 382
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ + + GR + A+ F + + + LL+ L + D + K
Sbjct: 383 NTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK 442
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ P++ I+I +C+ ++E A + + S G+ PN+ T+T ++ G R
Sbjct: 443 TIEGS-NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRR 501
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ A ++F ++ G PD TY + G ++ A++++ EM G + T
Sbjct: 502 GLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTT 561
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQ 318
+++E C K + +L + +Q
Sbjct: 562 TLLVEMLCDDKLDQSVKQILSEFVQ 586
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 206/448 (45%), Gaps = 46/448 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ +Q ++ A Q+ F N TY+++IH L + + E
Sbjct: 335 PDHVAYTALINGFVKQSDIGGAFQVKEEM--FARKIKLNTFTYYALIHGLCKIGDLEKAE 392
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
L +E+ P+I+ + +I Y E A + + I+K N+
Sbjct: 393 DLFSEMTMMGIKPDIQT----YNCLIEGYYKVQNMEKAYELLIEIKKENL---------- 438
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
N + C ++ LC D+ A + EM S G
Sbjct: 439 --------------------------TANAYMCGAIVNGLCHCGDLTRANELFQEMISWG 472
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ PN+V +TTI+ G V G E A ++ G + D+G PD Y ++ G+ K G++ +
Sbjct: 473 LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGK 532
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ EM G++PN TYG I +C+ + A +ML P+ +C +ID
Sbjct: 533 SYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGY 592
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSL 394
C++G A ++ +L + +PD S +IH L K GK+ EA +F E ++G +P +
Sbjct: 593 CKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDV 652
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
TY +LI+ +C+ +L A L DDM +KG+ PN+ TYN LI G CK+G + + +
Sbjct: 653 FTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDG 712
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ +KG N ++S +I G +S N E
Sbjct: 713 IPEKGLARNSVTYSTIIAGYCKSANLTE 740
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 214/420 (50%), Gaps = 4/420 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY + IH RA A E E+ + I + + +I Y G A
Sbjct: 546 NVYTYGAFIHGYCRAGEMQAAERSFIEM-LDSGIAPNDVICTDLIDGYCKDGNTTKAFAK 604
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V V++ + L++ L +N + +F K +VP+VFT LI LC
Sbjct: 605 FRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDK-GLVPDVFTYTSLISNLC 663
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ D++ A + D+M G+ PN+VT+ ++ G G+I A+ +F I ++G ++
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSV 723
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY+ ++ GY K LT+A ++ M+ GV P+ Y +I+ CK + +A +L M
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ + A +ID + GK+ +A +L + ++ + P++ + +I + C G I
Sbjct: 784 VEEGIASTPAFNA-LIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA++LF E + R +P++LTY +L+ G +E L+D+MV +G++P+ ++++
Sbjct: 843 KEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVM 902
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ K GN + ++++++ML +G K +++LI+ L + N EV KV+ GS
Sbjct: 903 VDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGS 962
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 218/499 (43%), Gaps = 59/499 (11%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLA-LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
P P +L P + +I + Q +D L F FS N T+ + L + F
Sbjct: 65 PLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFG 124
Query: 96 AVESLLTEL--KQNPEIKCGENL------------------FITVIRNYGLAGRPELAVK 135
++L + +NP +K +++ F +I Y G AV
Sbjct: 125 NAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVS 184
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
FL + + N+L L++ R +L ++K +VP+V+T LI A
Sbjct: 185 VFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGA--IVPDVYTYTNLINAY 242
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ VE VL +M G +PNLVT++ ++ G GD++ A + + ++G +PD
Sbjct: 243 CRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDN 302
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+DG+ + R T+ ++DEM G++P+ V Y +I F K G A + ++
Sbjct: 303 YIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEE 362
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD---------------- 359
M RK ++ +I LC+ G +E A +L+ + PD
Sbjct: 363 MFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQN 422
Query: 360 ------------------NA-ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNT 399
NA + I++ LC G + A +LF E G P+++ Y T
Sbjct: 423 MEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTT 482
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
++ G+ + EA ++ M ++G+ P+VF YN +I GFCK G +EG L EM+ KG
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542
Query: 460 CFPNKTSFSLLIEGLYESG 478
PN ++ I G +G
Sbjct: 543 LKPNVYTYGAFIHGYCRAG 561
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 195/433 (45%), Gaps = 9/433 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N Y +I+ L + F+ +L +K +P++ C + TVI + AG+ E
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFC----YNTVIIGFCKAGKMEEG 531
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + ++ +V + ++ + F + PN C LI
Sbjct: 532 KSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS-GIAPNDVICTDLID 590
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK + A M G++P++ TH+ ++ G G ++ A VF ++LD+G VP
Sbjct: 591 GYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVP 650
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TYT L+ K G L A ++ D+M G+ PN VTY +I CK + +AR L
Sbjct: 651 DVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELF 710
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D + ++ +S +I C+ + +A +L+ + PD+ + +I CK
Sbjct: 711 DGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKA 770
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
G +A LF I S +N LI G + +L EA +L +DMV+ + PN TY
Sbjct: 771 GNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYT 830
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+LI+ C +GN KE ++ EM + PN +++ L+ G G E+ + A
Sbjct: 831 ILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR 890
Query: 494 GSVESD-SWNFLL 505
G D +W+ ++
Sbjct: 891 GIKPDDLAWSVMV 903
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 5/360 (1%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
TL++ + KR M + + + P+ LI K+ D+ GA +V +EM +
Sbjct: 307 TLIDGFCRQKRSTEGKSML-DEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFA 365
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+ N T+ ++ G GD+E A+ +F ++ G PD TY L++GY K+ +
Sbjct: 366 RKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEK 425
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A +++ E++ + N G ++ C A L +M+ P+ + ++
Sbjct: 426 AYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVK 485
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK-LFDEFERGSIP 392
L +EG+ E+A ++ + + PD +T+I CK GK+ E K L + +G P
Sbjct: 486 GLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKP 545
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++ TY I G C + E+ A R + +M++ G+ PN LI G+CK GN +
Sbjct: 546 NVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKF 605
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDL 512
MLD+G P+ + S+LI GL ++G E V S G V F T ++S+L
Sbjct: 606 RCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDV---FTYTSLISNL 662
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 116/231 (50%), Gaps = 10/231 (4%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVV 182
AG E A+ FL + + + S + N L++ + + Y LV M N +
Sbjct: 770 AGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDN-----HIT 823
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T ILI+ C +++ A ++ EM ++PN++T+T++L GY G +
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++ RG PD ++V++D ++K G A+K++D+M GV + Y ++I+A CK
Sbjct: 884 FDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCK 943
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
E +LD++ ++ S A C ++ G+ ++A + + ++R
Sbjct: 944 HNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N LI K + A +++++M + PN VT+T ++ + G+I+ A+++F ++
Sbjct: 795 NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQK 854
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R +P+ TYT L+ GY ++GR ++ + DEM G++P+++ + VM++A K +
Sbjct: 855 RNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIK 914
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L+DDML L +ID LC+ + + ++ + ++ A T++
Sbjct: 915 ALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVC 974
Query: 369 WLCKEGKIWEAKKLFDEFERGSIPSLLTYN 398
+ G+ EA ++ + R S +LL ++
Sbjct: 975 CFHRAGRTDEALRVLESMVR-SFLNLLEFS 1003
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 140/346 (40%), Gaps = 33/346 (9%)
Query: 157 NALVQNKRYDLVHLMFK--NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
N ++ KR +H F NSR F N+ T +IL LC A VL+ M
Sbjct: 82 NQVIDPKR---LHGFFNWVNSRTVFS--QNLSTFSILSLILCNSGLFGNAANVLERM--- 133
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
+ H IL + + + +I + +L+D Y K G L +A
Sbjct: 134 --IDTRNPHVKILDSII---------KCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEA 182
Query: 275 VKVMDEMEDNGVEPNEVTYGV-----MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
V V G + NE G+ + + KG + + ML VP
Sbjct: 183 VSVFL-----GAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLG-AIVPDVYTYT 236
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I+ C GKVE+ + + K C+P+ S +I LC+ G + EA +L +
Sbjct: 237 NLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANK 296
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +P Y TLI G C TE + D+M G++P+ Y LI GF K +
Sbjct: 297 GLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGA 356
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ EEM + N ++ LI GL + G+ + + S T G
Sbjct: 357 FQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 192/348 (55%), Gaps = 4/348 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNIL 191
AV F R+ + N N +L +LV++K Y V ++ + + +F+ + PN+ CNIL
Sbjct: 69 AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTV--LYLSQKMEFRGIKPNLVNCNIL 126
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I C+ + A V ++ MG VP+ +T TT++ G +G I+ A ++ G+
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF 186
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
D +Y L+ G K+G A+ ++ ++ N V+PN V Y +I++ CK K EA +
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M+ + P +I C GK+ DA +L+ +++ +N PD + +++ C
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306
Query: 372 KEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K+GK+ E K +FD ++G P+ +TYN+L+ G C E+ +A +++ M + GV P++
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+Y+++I GFCKI E + + +EM K P+ ++S LI+GL +SG
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 179/317 (56%), Gaps = 1/317 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PNV N +I ++CK V A + EM S G+ P++VT++ ++ G+ G + +A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++ PD T+ +L++ + K G++ + V D M G++PN VTY +++ +
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ +A+++ + M Q P +I+ C+ K ++A L+K + RKN +PD
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
S++I L K G+I A +L D+ +RG P++ TYN+++ +C+ ++ +A L
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTK 460
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ +KG++PN++TY++LI+G C+ G ++ ++ E +L KG N +++++I+G G
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGL 520
Query: 480 EGEVGKVVSMATASGSV 496
E ++S +G +
Sbjct: 521 FNEALALLSKMEDNGCI 537
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 192/381 (50%), Gaps = 10/381 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKN 174
T+I G A+ R++ VQ +V NT+++++ + N+ +DL M
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK 254
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P+V T + LI C + AI + ++M + P++ T ++ + G
Sbjct: 255 G-----ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDG 309
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ K VF ++ +G P+ TY LMDGY + + A + + M GV P+ +Y
Sbjct: 310 KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYS 369
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+MI FCK KK EA NL +M ++ +P +ID L + G++ A +L ++ +
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
P ++I+ LCK ++ +A L + ++G P++ TY+ LI G+C+S +L +A
Sbjct: 430 GVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA 489
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
++++ ++ KG NV TY ++IQGFC G E + +L +M D GC P+ ++ ++I
Sbjct: 490 RKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549
Query: 474 LYESGNEGEVGKVVSMATASG 494
L++ K++ A G
Sbjct: 550 LFKKDENDMAEKLLREMIARG 570
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 169/317 (53%), Gaps = 2/317 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK + A+ +L + + PN+V + TI+ + A +F +++ +G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG 255
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY+ L+ G+ LG+L DA+ + ++M ++P+ T+ +++ AFCK K E +
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ D M+++ P+ ++D C +V A ++ + + PD S +I+
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK K EA LF E R +I P ++TY++LI G+ +S ++ A +L D M ++GV P +
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTI 435
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN ++ CKI + I +L ++ DKG PN ++S+LI+GL +SG + KV
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495
Query: 490 ATASG-SVESDSWNFLL 505
G ++ D++ ++
Sbjct: 496 LLVKGHNLNVDTYTIMI 512
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 144/287 (50%), Gaps = 1/287 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+V+T NIL+ A CK ++ V D M G+ PN VT+ +++ GY ++ AK
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + G PD +Y+++++G+ K+ + +A+ + EM + P+ VTY +I+
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K + A L+D M R P+ ++D LC+ +V+ A L +L K P+
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNM 470
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
S +I LC+ GK+ +A+K+F+ +G ++ TY +I G C EA L
Sbjct: 471 YTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
M + G P+ TY ++I K ++L EM+ +G P + +
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N +++++ + D+++A +F +L R P A + ++ +K + +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME G++PN V ++I FC+ A ++ +L+ YVP + +I LC +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
G+++ A +++ D T+IH LCK G+ A L + + P+++ Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I MC+ + EA L+ +M+ KG+ P+V TY+ LI GFC +G + I + +M+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ P+ +F++L+ + G E V M G
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 216/430 (50%), Gaps = 6/430 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I + + LL + +P++ + T++R +G+ + A++ R
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVSPDVV----TYNTILRTLCDSGKLKEAMEVLDR 237
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + L+ A + + R K P+V T N+LI +CK+
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK-GCKPDVVTYNVLINGICKEG 296
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AIR L+ MPS G PN++TH IL G +A++ +++ +G P T+
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + G + A+ V+++M +G PN ++Y ++ A CK KK A LD M+ R
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GKV+ A E+ +L K C P +T+I L K GK +A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE + +G P ++TY+TL+ G+ ++ EA + D+ E GV+PN TYN ++ G
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK I L M+ +GC P +TS+ +LIEGL G E ++++ + G V+
Sbjct: 537 LCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKK 596
Query: 499 DSWNFLLTRI 508
S ++ +I
Sbjct: 597 SSAEQVVVKI 606
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 220/486 (45%), Gaps = 48/486 (9%)
Query: 57 LDLALQIFHYAGKF---HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
+DL L HY F H + + N D +A+ R SL + G
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTAKNRDR-----RVMAKGRVSSETNSL--------RLHAG 47
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFN----VQRSVRSLNTLLNALVQNKRYDLVH 169
E VI +YG E V+ R++ F+ + ++L+T LN + H
Sbjct: 48 EKGRFFVIPSYG---SEEQLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNH 104
Query: 170 LM----FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+N+ H ++ L + ++E + L++M G +P+++ T+
Sbjct: 105 SQSSEEVENNNH--------------LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTS 150
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G G A RV + D G VPD TY VL+ GY K G + A++++D M
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS--- 207
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V P+ VTY ++ C K EA +LD +QR+ P +I+ C+E V A
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
+L + K C PD + +I+ +CKEG++ EA + + G P+++T+N ++ M
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + +A + +M+ KG P+V T+N+LI C+ G I +LE+M GC PN
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSD--LDSGAGALDE 521
S++ L+ L + + + + + G + ++N LLT + D +D L++
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447
Query: 522 LLVKNC 527
L K C
Sbjct: 448 LGSKGC 453
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 4/410 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I+ LAR + L+ ++ + K F +I Y G E A L
Sbjct: 270 TYNVVINGLARKGELEKAAQLVDRMRMSK--KASAFTFNPLITGYFARGSVEKAGALQLE 327
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E + +V + NT+++ + ++ + + F R ++P++ T N LI CK
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR-AMGLLPDLITYNSLINGYCKAG 386
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+++ A+ + ++ G+ P+++T+ +L GY GD+E A+R +++++G PD +TYT
Sbjct: 387 NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYT 446
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+LM+G K+ L + DEM G++P+ Y I A + EA L + M+ R
Sbjct: 447 ILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISR 506
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ +D LC+ G ++DA LW +++ PD + +IH C+ G++ EA
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA 566
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G PS +TY I C L A + M+E+GV PN TYN+LI
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
C++G + EML++G PNK +++LLI+G + GN E ++ S
Sbjct: 627 LCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYS 676
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 166/355 (46%), Gaps = 3/355 (0%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCKKDD 200
+ ++ S+ + NTLL++ + R D + + + +P+ T N++I L +K +
Sbjct: 224 QLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGE 283
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +++D M M + T ++ GY RG +E A + ++ + G VP TY
Sbjct: 284 LEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNT 342
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G + G + A EM G+ P+ +TY +I +CK EA L D+ +
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
PS ++D C G +E+A + ++ + C PD + + +++ K + +
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVR 462
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ FDE +G P YNT I+ +EA +L + M+ +G+ + TYN+ + G
Sbjct: 463 EFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGL 522
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
CK GN K+ + +M+ G P+ +++ LI E G E + SG
Sbjct: 523 CKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSG 577
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 5/329 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P + CN++++AL + + V EM +G+ P++VT+ T+L + G ++ A
Sbjct: 192 VPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAA 251
Query: 241 RVFGDILDR--GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
++ ++ R G +P TY V+++G + G L A +++D M + + + T+ +I
Sbjct: 252 KLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLIT 310
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ +A L +M VP+ +I + G VE A + + +P
Sbjct: 311 GYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLP 370
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I+ CK G + EA LF + +R G PS+LTYN L+ G C +L EA R
Sbjct: 371 DLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFK 430
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+MVE+G +P+V TY +L+ G K+ N +EML KG P+ +++ I
Sbjct: 431 QEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL 490
Query: 478 GNEGEVGKVVSMATASG-SVESDSWNFLL 505
G+ E ++ + + G S ++ ++N L
Sbjct: 491 GSTSEAFQLTEVMISRGISSDTVTYNIFL 519
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ + T NI + LCK +++ A + +M S G+ P+ +T+T ++ + RG + A+
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F +L G P A TYTV + Y + G L A +M + GV PNEVTY V+I A
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ ++ A +ML+R P+ +ID C+EG E+A L+ + + PD+
Sbjct: 628 CRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDH 687
Query: 361 AISSTII 367
+ +
Sbjct: 688 CTHNALF 694
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 155/365 (42%), Gaps = 42/365 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++IIH + R+ +A E++ P++ + ++I Y AG + A+
Sbjct: 339 TYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLIT----YNSLINGYCKAGNLKEALWL 394
Query: 137 FLRIEKFNVQRSVRSLNTLLNA------LVQNKRYDL------------VHLMFKNSRHK 178
F +++ + SV + N LL+ L + +R+ + + N K
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454
Query: 179 FK----------------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ + P+ F N I A A ++ + M S G+ + VT
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ L G G++++A ++ ++ G PD TYT L+ + + GRL +A + D M
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+G+ P+ VTY V I A+C+ A ML+ P+ +I LC G+
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
A + + +L + P+ + +I CKEG EA +L+ E + I P T+N L
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694
Query: 402 AGMCE 406
G E
Sbjct: 695 KGFDE 699
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 139/309 (44%), Gaps = 74/309 (23%)
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM +GV P +++ A + + R++ +MLQ PS ++D EG
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245
Query: 340 KVEDACELWKRLLRK--NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE------------ 385
+V+ A +L + + + C+P + + +I+ L ++G++ +A +L D
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTF 305
Query: 386 -------FERGS----------------IPSLLTYNTLIAGM------------------ 404
F RGS +P+++TYNT+I GM
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365
Query: 405 -----------------CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
C++ L EA L+ D+ G+ P+V TYN+L+ G+C++G+ +E
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEE 425
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR 507
R +EM+++GC P+ +++++L+ G + N V + + G ++ D + + TR
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKG-LQPDCFAY-NTR 483
Query: 508 IVSDLDSGA 516
I ++L G+
Sbjct: 484 ISAELILGS 492
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T + I A C++ ++ A +M G+ PN VT+ ++ G A +
Sbjct: 580 PSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQH 639
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L+RG P+ TYT+L+DG K G +A+++ EM +G+ P+ T+ + + F +
Sbjct: 640 FHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDE 699
Query: 303 GKK 305
G+
Sbjct: 700 GQS 702
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 183/347 (52%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S+ LL ++ + K Y V L F V PNV+T NILI
Sbjct: 40 ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTV-LSLSTQMDSFGVPPNVYTLNILI 98
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + V A VL ++ +G P+ T TT++ G G I A +F ++D G+
Sbjct: 99 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G + A++++ ME +P+ V Y +I++ CK ++ EA NL
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M+ + P ++ LC + + L +++ +PD I ST++ LCK
Sbjct: 219 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 278
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK+ EA ++ D +RG P ++TY TL+ G C +E+ EA +++D MV KG P+V +
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y LI G+CKI + + + EEM K P+ +++ L+ GL G
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVG 385
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 198/394 (50%), Gaps = 2/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q V +++++L ++++ +F +
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 225
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P++FT L+ ALC + + +L++M + ++P++V +T++ G +
Sbjct: 226 -GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 284
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + ++ RG PD TYT LMDG+ + +AVKV D M G P+ ++Y +I
Sbjct: 285 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 344
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K +A L ++M +++++P + ++ LC G+++DA L+ ++ + MP
Sbjct: 345 GYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMP 404
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D S ++ LCK + EA L E ++ P + YN +I GMC + EL A L+
Sbjct: 405 DLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 464
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG+ P+V+TYN++I G CK G E ++ EM C P+ +++ + G ++
Sbjct: 465 SNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 524
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ A G S LL ++SD
Sbjct: 525 NETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD 558
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 210/409 (51%), Gaps = 9/409 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRP 130
F N TY ++I+ L + A LL ++Q P++ ++ ++I + +
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV----IYTSIIDSLCKDRQV 212
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
A F ++ + + + +L++AL + V + N K++P+V +
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLL-NQMVNSKILPDVVIFST 271
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ ALCK+ V A ++D M G+ P++VT+TT++ G+ + +++ A +VF ++ +G
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ PD +YT L++GY K+ ++ A+ + +EM P+ TY ++ C + +A
Sbjct: 332 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAI 391
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L +M+ R +P ++D LC+ +E+A L K + N PD + + II +
Sbjct: 392 ALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 451
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G++ A+ LF +G PS+ TYN +I G+C+ L EA +L+ +M P+
Sbjct: 452 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 511
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
TYN + +GF + I++LEEML +G + ++ +LL+E L + G
Sbjct: 512 CTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 2/265 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P + L+ K+ + + + +M+ GV PN T +
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + G A ++L +L+ + P +I LC EGK+ +A L+ +++ +
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P+ T+I+ LCK G A +L E+G+ P ++ Y ++I +C+ ++TEA
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ MV +G+ P++FTY L+ C + K +L +M++ P+ FS +++ L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276
Query: 475 YESGNEGEVGKVVSMATASGSVESD 499
+ G E ++V M G VE D
Sbjct: 277 CKEGKVTEAHEIVDMMIQRG-VEPD 300
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 119/239 (49%), Gaps = 1/239 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y + + A+ F + + ++ NTL++ L R +F
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ ++ P++ T +IL+ +LCK +E A+ +L + + + P++ + I+ G G++
Sbjct: 399 ARGQM-PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 457
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E A+ +F ++ +G P TY +++ G K G L +A K+ EM+ N P+ TY +
Sbjct: 458 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 517
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
F + ++ A LL++ML R + + ++++L ++G + +C L +L ++
Sbjct: 518 ARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSED 576
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 186/331 (56%), Gaps = 2/331 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + K++D+V + + ++V ++T NILI C++ + A+ +
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVV-ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+T L+ G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D M G +PN VTYGV++ CK + A NLL+ M K +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEF 386
+ID LC+ V+DA L+K + K P+ S++I LC G+ +A +L D
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E+ P+L+T+N LI + + EA +L+DDM+++ ++P++FTYN L+ GFC
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ ++ E M+ K CFP+ +++ LI+G +S
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 7/411 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
T+ ++IH L +L+ + Q C NL + GL G +LA+
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ V NT++++L + + D +FK K + PNV T + LI LC
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCS 307
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++L +M + PNLVT ++ +V G A++++ D++ R PD T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++G+ RL A ++ + M P+ VTY +I+ FCK K+ + L +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R V + +I L +G ++A +++K+++ PD S ++ LC GK+
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++FD ++ I + Y T+I GMC++ ++ + L+ + KGV+PNV TYN +I
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G C +E +L++M + G PN +++ LI G++ +++
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 210/433 (48%), Gaps = 36/433 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ ++ +A+ + FD V SL E Q EI G + +I + + LA+ ++
Sbjct: 88 FNKLLSAIAKMKKFDVVISL-GEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYD-----------------------LVHLMFKNSRH 177
K + S+ +L++LLN KR L+H +F +++
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 178 KFKVV-----------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
V PN+ T +++ LCK+ D + A+ +L++M + + ++V TI
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +++A +F ++ +G P+ TY+ L+ GR +DA +++ +M + +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN VT+ +I+AF K K EA L DDM++R P +++ C +++ A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
+++ ++ K+C PD +T+I CK ++ + +LF E RG + +TY TLI G+
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ A +++ MV GV P++ TY++L+ G C G ++ + + + M +
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 466 SFSLLIEGLYESG 478
++ +IEG+ ++G
Sbjct: 507 IYTTMIEGMCKAG 519
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 3/380 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++ L + D +LL ++ + +I+ +F T+I + + A+
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ +V + ++L++ L R+ + + K K+ PN+ T N LI A
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFV 341
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A ++ D+M + P++ T+ +++ G+ ++ AK++F ++ + PD
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ K R+ D ++ EM G+ + VTY +I+ A+ + M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++D LC GK+E A E++ + + D I +T+I +CK GK+
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ LF +G P+++TYNT+I+G+C L EA L M E G PN TYN L
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 436 IQGFCKIGNAKEGIRILEEM 455
I+ + G+ ++ EM
Sbjct: 582 IRAHLRDGDKAASAELIREM 601
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG ++ +P + L+ K+ + + + ++M+ + TY +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FC+ + A LL M++ Y PS +++ C ++ DA L +++
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +T+IH L K EA L D +RG P+L+TY ++ G+C+ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L + M +E +V +N +I CK + + + + +EM KG PN ++S LI L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 475 YESGNEGEVGKVVS 488
G + +++S
Sbjct: 306 CSYGRWSDASQLLS 319
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 104/226 (46%), Gaps = 2/226 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I+ + + R E + F + + + TL+ L + D +FK
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P++ T +IL+ LC +E A+ V D M + ++ +TT++ G G +++
Sbjct: 465 -GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+F + +G P+ TY ++ G L +A ++ +M+++G PN TY +I
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
A + + L+ +M ++V ++ V ++L +G+++ +
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 186/331 (56%), Gaps = 2/331 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + K++D+V + + ++V ++T NILI C++ + A+ +
Sbjct: 46 SIVEFNKLLSAIAKMKKFDVV-ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+T L+ G
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D M G +PN VTYGV++ CK + A NLL+ M K +
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEF 386
+ID LC+ V+DA L+K + K P+ S++I LC G+ +A +L D
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E+ P+L+T+N LI + + EA +L+DDM+++ ++P++FTYN L+ GFC
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ ++ E M+ K CFP+ +++ LI+G +S
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 375
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 7/411 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
T+ ++IH L +L+ + Q C NL + GL G +LA+
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDTDLALNLL 210
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ V NT++++L + + D +FK K + PNV T + LI LC
Sbjct: 211 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCS 269
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++L +M + PNLVT ++ +V G A++++ D++ R PD T
Sbjct: 270 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 329
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++G+ RL A ++ + M P+ VTY +I+ FCK K+ + L +M
Sbjct: 330 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 389
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R V + +I L +G ++A +++K+++ PD S ++ LC GK+
Sbjct: 390 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 449
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++FD ++ I + Y T+I GMC++ ++ + L+ + KGV+PNV TYN +I
Sbjct: 450 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 509
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G C +E +L++M + G PN +++ LI G++ +++
Sbjct: 510 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 560
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 210/433 (48%), Gaps = 36/433 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ ++ +A+ + FD V SL E Q EI G + +I + + LA+ ++
Sbjct: 50 FNKLLSAIAKMKKFDVVISL-GEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 108
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYD-----------------------LVHLMFKNSRH 177
K + S+ +L++LLN KR L+H +F +++
Sbjct: 109 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 168
Query: 178 KFKVV-----------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
V PN+ T +++ LCK+ D + A+ +L++M + + ++V TI
Sbjct: 169 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +++A +F ++ +G P+ TY+ L+ GR +DA +++ +M + +
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN VT+ +I+AF K K EA L DDM++R P +++ C +++ A +
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
+++ ++ K+C PD +T+I CK ++ + +LF E RG + +TY TLI G+
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ A +++ MV GV P++ TY++L+ G C G ++ + + + M +
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468
Query: 466 SFSLLIEGLYESG 478
++ +IEG+ ++G
Sbjct: 469 IYTTMIEGMCKAG 481
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 3/380 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++ L + D +LL ++ + +I+ +F T+I + + A+
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 244
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ +V + ++L++ L R+ + + K K+ PN+ T N LI A
Sbjct: 245 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFV 303
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A ++ D+M + P++ T+ +++ G+ ++ AK++F ++ + PD
Sbjct: 304 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 363
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ K R+ D ++ EM G+ + VTY +I+ A+ + M
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 423
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++D LC GK+E A E++ + + D I +T+I +CK GK+
Sbjct: 424 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 483
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ LF +G P+++TYNT+I+G+C L EA L M E G PN TYN L
Sbjct: 484 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 543
Query: 436 IQGFCKIGNAKEGIRILEEM 455
I+ + G+ ++ EM
Sbjct: 544 IRAHLRDGDKAASAELIREM 563
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG ++ +P + L+ K+ + + + ++M+ + TY +
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FC+ + A LL M++ Y PS +++ C ++ DA L +++
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +T+IH L K EA L D +RG P+L+TY ++ G+C+ + A
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L + M +E +V +N +I CK + + + + +EM KG PN ++S LI L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267
Query: 475 YESGNEGEVGKVVS 488
G + +++S
Sbjct: 268 CSYGRWSDASQLLS 281
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 104/226 (46%), Gaps = 2/226 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I+ + + R E + F + + + TL+ L + D +FK
Sbjct: 367 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 426
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P++ T +IL+ LC +E A+ V D M + ++ +TT++ G G +++
Sbjct: 427 -GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 485
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+F + +G P+ TY ++ G L +A ++ +M+++G PN TY +I
Sbjct: 486 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
A + + L+ +M ++V ++ V ++L +G+++ +
Sbjct: 546 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 590
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 192/348 (55%), Gaps = 4/348 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNIL 191
AV F R+ + N N +L +LV++K Y V ++ + + +F+ + PN+ CNIL
Sbjct: 69 AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTV--LYLSQKMEFRGIKPNLVNCNIL 126
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I C+ + A V ++ MG VP+ +T TT+ G +G I+ A ++ G+
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
D +Y L+ G K+G A+ ++ ++ N V+PN V Y +I++ CK K EA +
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M+ + P +I C GK++DA +L+ +++ +N PD + +++ C
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFC 306
Query: 372 KEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K+GK+ E K +FD ++G P+ +TYN+L+ G C E+ +A +++ M + GV P++
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+Y+++I GFCKI E + + +EM K P+ ++S LI+GL +SG
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 203/395 (51%), Gaps = 11/395 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKN 174
T+I G A+ R++ VQ +V NT+++++ + N+ +DL M
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK 254
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P+V T + LI C ++ AI + ++M + P++ T ++ + G
Sbjct: 255 G-----ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDG 309
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ K VF ++ +G P+ TY LMDGY + + A + + M GV P+ +Y
Sbjct: 310 KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYS 369
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+MI FCK KK EA NL +M ++ +P +ID L + G++ A +L ++ +
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
P+ ++I+ LCK ++ +A L +F ++G P + TY+ LI G+C+S +L +A
Sbjct: 430 GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDA 489
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
++++D++ KG +V+ Y ++IQGFC G E + +L +M D GC P+ ++ ++I
Sbjct: 490 RKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549
Query: 474 LYESGNEGEVGKVVSMATASGSVESDSWNFLLTRI 508
L++ K++ A G + + ++ LTR+
Sbjct: 550 LFKKDENDMAEKLLREMIARG-LPLNFYDLYLTRL 583
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N +++++ + D+++A +F +L R P A + ++ +K + +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME G++PN V ++I FC+ A ++ +L+ YVP + + LC +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
G+++ A +++ D T+IH LCK G+ A L + + P+++ Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I MC+ + EA L+ +MV KG+ P+V TY+ LI GFC +G K+ I + +M+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ P+ +F++L+ + G E V M G
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 252/558 (45%), Gaps = 91/558 (16%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGK-FHPNFSHNYDTYHSIIHKLARARA 93
+K R+ + S++ Q + L ++F ++ K +H D II KL + A
Sbjct: 52 LKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQDL---IIGKLIKENA 108
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
F+ +L ELK N IK F +I Y AG E AV++F + F+ + + + N
Sbjct: 109 FELYWKVLQELK-NSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFN 167
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+ LV+ + + L+ L N K + P+V T ILI LCK + A+ + DEM
Sbjct: 168 LILHFLVRKEAF-LLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G++PN + ++ +L G I +A+R+F + G D TY VL++G+ K G L D
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDD 286
Query: 274 AVKVMDEMEDNG-----------------------------------VEPNEVTYGVMIE 298
A ++ + +G ++P+ + Y +MI
Sbjct: 287 AFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIR 346
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + EA LL +M +R P + +I C+ G +++A L + + +C P
Sbjct: 347 GLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFP 406
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+N S +I +CK G I +A+ +F E E+ G +PS++T+N+LI G+C++ L EA L+
Sbjct: 407 NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLF 466
Query: 418 DDM------------------------------------------------VEKGVEPNV 429
M V+ GV P++
Sbjct: 467 YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN+LI GFCK GN ++ +EM KG P+ ++ LI+GLY +G + ++
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586
Query: 490 ATASGSV-ESDSWNFLLT 506
G V ES ++ ++T
Sbjct: 587 MVKKGCVPESSTYKTIMT 604
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 154/311 (49%), Gaps = 15/311 (4%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+N L + +RY+ H+ ++ + + P+V I+I+ L ++ V A+ +L EM
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRE-NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ P+ + + ++ G+ G ++ A+ + +I P+ TY++L+ G K G + A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-LQRK---YVPSSALCCK 330
+ EME G P+ VT+ +I CK + EAR L M + RK ++ S K
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487
Query: 331 VIDL---------LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
V D+ LCE G + A +L +L+ +PD + +I+ CK G I A K
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFK 547
Query: 382 LFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LF E + +G +P +TY TLI G+ + +A +++ MV+KG P TY ++ C
Sbjct: 548 LFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607
Query: 441 KIGNAKEGIRI 451
+ N + +
Sbjct: 608 RENNISLALSV 618
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 19/323 (5%)
Query: 81 YHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y +I+ L RAR ++ + L++N IK L+ +IR GR A+
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLREN--IKPDVMLYTIMIRGLSQEGRVTEALTLLGE 363
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + ++ N L+ D L + S+H PN T +ILI +CK
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD--CFPNNHTYSILICGMCKN 421
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI-----------L 247
+ A + EM +G +P++VT +++ G +E A+ +F + L
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481
Query: 248 DRGW--VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+G V D + V+M+ + G + A K++ ++ D+GV P+ TY ++I FCK
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A L +M + ++P S +ID L G+ EDA E+++++++K C+P+++ T
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601
Query: 366 IIHWLCKEGKIWEAKKLFDEFER 388
I+ W C+E I A ++ ++ R
Sbjct: 602 IMTWSCRENNISLALSVWMKYLR 624
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+P++ T NILI CK ++ GA ++ EM G +P+ VT+ T++ G G E+A
Sbjct: 522 VLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDAL 581
Query: 241 RVFGDILDRGWVPDATTYTVLMD----------------GYIKLGR-------------- 270
+F ++ +G VP+++TY +M Y++ R
Sbjct: 582 EIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESF 641
Query: 271 ----LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
L A++ + EM+ + Y + + + K+ EA + + K SSA
Sbjct: 642 DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSA 701
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPD--NAISSTIIHWLCKEGKIWEAKKL 382
C +I LC ++ A +++ L + MP N + ++H K+ ++ A ++
Sbjct: 702 SCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRM 761
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 231/470 (49%), Gaps = 5/470 (1%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
+ L P +I R + L L+ F ++ + H + +H ++TY ++ L + D+ +
Sbjct: 72 RNLNPSIAFEVIKRFSDPLLGLKFFEFS-RTHLSINHTFNTYDLLMRNLCKVGLNDSAKI 130
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
+ ++ + I ++ ++ +Y G+ + A + + ++ S N LLN L
Sbjct: 131 VFDCMRSD-GILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNML 189
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ D L+F+ + VP+V++ NILI+ LC+ +++ A M + G P+
Sbjct: 190 VKQNLVDEAVLLFREHLEPY-FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
Query: 220 LVTHTTILGGYVWRGDIENAKRVFG-DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+V++ T++ G+ +I + D+L +G PD TYT ++ GY KLG + A ++
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELF 308
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
DEM +G++PN+ T+ V+I+ F K A + + ML +P +ID C E
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
G+V +LW+ + +N P+ + +I+ LCKE +I EA+ + + P Y
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIY 428
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N +I G C++ ++ EA + +M EK P+ T+ +LI G C G E I +M++
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR 507
C P++ + + LI L ++G E ++ A ++ S LTR
Sbjct: 489 INCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTR 538
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 255/535 (47%), Gaps = 71/535 (13%)
Query: 8 KITAP--SCLLQSIGGARCSLSTITVT------PPIKPWPQRLYPKRLVSMIFRQQ-NLD 58
K+T P + QS+ S+STI+ +KP + P + +F + +
Sbjct: 5 KLTGPVQGSVFQSL-----SISTISELLSNQHWSELKPHFRTTKPAIFLDQLFNAGVDSE 59
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE---- 114
L L+ F ++ K S+ +T ++H LA ++ + V S L +L +N +
Sbjct: 60 LVLRFFQWSQK-EFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHS 118
Query: 115 ----------NLFITVIRNYGLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
N IT + E+ A + F R++ + + S+ S N LL+ALV+
Sbjct: 119 LLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKG 178
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ ++K K ++ PN+ T NI I LCK + A V++++ + G PN+VT
Sbjct: 179 NETGEMQYVYK-EMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVT 237
Query: 223 HTTILGGYVWRG--------------------------------------DIENAKRVFG 244
+ T++ G+ +G ++ AK F
Sbjct: 238 YNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFE 297
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
++ +G P+ TY L++G G+L +A+ + D+M G++PN VT+ +I FCK K
Sbjct: 298 EMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKK 357
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
EAR L DD+ ++ VP++ +ID C+ G +E+ L +L + P+ + +
Sbjct: 358 MIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYN 417
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I LC+ + AKKL +E E + + ++TYN LI G C+ E ++A +L +M+
Sbjct: 418 CLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GV+PN TYN L+ G+C GN K +++ +M +G N ++++LI+G ++G
Sbjct: 478 GVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTG 532
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 190/385 (49%), Gaps = 23/385 (5%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHL---- 170
+F+ + N G+ EL ++ F +K F + + + +L+ L +K+Y V
Sbjct: 46 IFLDQLFNAGV--DSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDK 103
Query: 171 MFKNSRHKFKVV------------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+ KN +H V N ++L+ A ++ A V + G
Sbjct: 104 LVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKL 163
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+L + +L V + + V+ +++ R P+ TT+ + ++G K G+L A V+
Sbjct: 164 SLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVI 223
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGE---ARNLLDDMLQRKYVPSSALCCKVIDLL 335
++++ G PN VTY +I+ CK +G+ A +L +ML K P+ +ID
Sbjct: 224 EDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGF 283
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C++ V A ++ + R+ P+ +++I+ L GK+ EA L+D+ G P++
Sbjct: 284 CKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNI 343
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+T+N LI G C+ + EA +L+DD+ E+ + PN T+N +I FCK G +EG +
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGN 479
MLD+G FPN ++++ LI GL + N
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQN 428
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 8/270 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESL---LTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+S+I+ L+ D +L + L P I F +I + + A
Sbjct: 307 NIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVT----FNALINGFCKKKMIKEA 362
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K F I + ++ + + NT+++A + + NS + PNV T N LI
Sbjct: 363 RKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME-EGFALHNSMLDEGIFPNVSTYNCLIA 421
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC+ +V A ++L+EM + + ++VT+ ++GG+ G+ A+++ G++L+ G P
Sbjct: 422 GLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TY LMDGY G L A+KV +ME G N VTY V+I+ FCK K +A LL
Sbjct: 482 NHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLL 541
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
++ML++ P+ V + E+G + D
Sbjct: 542 NEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%)
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
SL + N L++ + + E E ++ +M+++ ++PN+ T+N+ I G CK G + ++
Sbjct: 164 SLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVI 223
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
E++ G PN +++ LI+G + G+ G++
Sbjct: 224 EDIKAWGFSPNIVTYNTLIDGHCKKGSAGKM 254
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 231/470 (49%), Gaps = 5/470 (1%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
+ L P +I R + L L+ F ++ + H + +H ++TY ++ L + D+ +
Sbjct: 72 RNLNPSIAFEVIKRFSDPLLGLKFFEFS-RTHLSINHTFNTYDLLMRNLCKVGLNDSAKI 130
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
+ ++ + I ++ ++ +Y G+ + A + + ++ S N LLN L
Sbjct: 131 VFDCMRSD-GILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNML 189
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ D L+F+ + VP+V++ NILI+ LC+ +++ A M + G P+
Sbjct: 190 VKQNLVDEAVLLFREHLEPY-FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
Query: 220 LVTHTTILGGYVWRGDIENAKRVFG-DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+V++ T++ G+ +I + D+L +G PD TYT ++ GY KLG + A ++
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELF 308
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
DEM +G++PN+ T+ V+I+ F K A + + ML +P +ID C E
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
G+V +LW+ + +N P+ + +I+ LCKE +I EA+ + + P Y
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIY 428
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N +I G C++ ++ EA + +M EK P+ T+ +LI G C G E I +M++
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR 507
C P++ + + LI L ++G E ++ A ++ S LTR
Sbjct: 489 INCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTR 538
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 191/372 (51%), Gaps = 10/372 (2%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVP 183
G A+K IE + + V NT+++ L + N+ YD M NSR F P
Sbjct: 251 GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM--NSRGIF---P 305
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+V T + LI C + GA +L+EM + P++ T+T ++ G ++ AK +
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLL 365
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
G + G P+ TY+ LMDGY +G + +A ++ M V P+ +Y +MI CKG
Sbjct: 366 GVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKG 425
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K EA NLL +ML + VP++ +ID LC+ G++ A +L K L + D
Sbjct: 426 KSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITY 485
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
++++ LCK + +A LF + ERG P+ TY LI G+C+ A L A +L+ ++
Sbjct: 486 TSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILV 545
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KG +V+TYN++I G CK G E + + +M D GC P+ +F ++I L+E +
Sbjct: 546 KGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDK 605
Query: 483 VGKVVSMATASG 494
K++ A G
Sbjct: 606 AEKLLHEMIAKG 617
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 170/332 (51%), Gaps = 2/332 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ +L +LV+ K + + K K + P++ T +ILI C + + V
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVK-GIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L ++ +G PN + TT++ G +G+++ + ++ +G+ + +Y L++G K
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+G A+K++ +ED P+ V Y +I+ CK K EA + +M R P
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I C G++ A L + KN PD + +I LCKEGK+ EAK L
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369
Query: 388 R-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ G P+++TY+TL+ G C E+ A +++ MV+ V P+V +YN++I G CK +
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + +L EML K PN +++ LI+GL +SG
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 140/279 (50%), Gaps = 36/279 (12%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+T ILI ALCK+ ++ A +L M G+ PN+VT++T++ GY G++ NAK++
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399
Query: 243 FG-----------------------------------DILDRGWVPDATTYTVLMDGYIK 267
F ++L + VP+ TY L+DG K
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GR+T A+ +M E+ G + +TY +++ CK + +A L M +R P+
Sbjct: 460 SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 519
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ID LC+ ++++A +L++ +L K C D + +I LCKEG + EA + + E
Sbjct: 520 YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579
Query: 388 -RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
G IP +T+ +I + E E +A +L +M+ KG+
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 2/282 (0%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N + + TY +I L + ++LL + + +K + T++ Y L G
Sbjct: 337 NINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKE-GVKPNVVTYSTLMDGYCLVGEVHN 395
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + F + + V SV S N ++N L + K D + + HK VVPN T N LI
Sbjct: 396 AKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK-NVVPNTVTYNSLI 454
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + A+ ++ E+ G +++T+T++L G +++ A +F + +RG
Sbjct: 455 DGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQ 514
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TYT L+DG K RL +A K+ + G + TY VMI CK EA +
Sbjct: 515 PNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAM 574
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
M +P + +I L E+ + + A +L ++ K
Sbjct: 575 KSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 37/217 (17%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
H N N TY+S+I L ++ + L+ EL G+
Sbjct: 439 LHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR--------------------GQ 478
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
P V + +LL+ L +N+ D +F + + + PN +T
Sbjct: 479 PA----------------DVITYTSLLDGLCKNQNLDKAIALFMKMKER-GIQPNKYTYT 521
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI LCK ++ A ++ + G ++ T+ ++GG G ++ A + + D
Sbjct: 522 ALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDN 581
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
G +PDA T+ +++ + A K++ EM G+
Sbjct: 582 GCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 90/216 (41%), Gaps = 27/216 (12%)
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ PN VT ++I + + ++L +L+ Y P+S ++ +G+ A
Sbjct: 6 GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLM-----KGETRCA 60
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGK---------------------IWEAKKLF 383
+L + + ++ P +SS++ H + + +A F
Sbjct: 61 IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQF 120
Query: 384 D-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ + PS++ + ++ + + A L M KG+EP++ T ++LI FC +
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G +L ++L G PN + L++GL G
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKG 216
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 174/295 (58%), Gaps = 1/295 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ NVFT + +IK+L K+ E + +VL+EM + G P++ ++ G+ ++E A+
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V+ +++ G+ PD +Y +L+ G K+G+L +++K++ EM G P+ Y ++ A
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K ++ A +L D+M++ + P + ++I LC+ GKV+DA E +K++ + C P+
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ + ++H LC G++ +A LF E + S P ++TYNTL+ +C++ + E +L++
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M G PNV T++ LI G C+ G ++ + + ML+ GC PNK +++ LI GL
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 199/412 (48%), Gaps = 20/412 (4%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGR 129
N + N TY SII L + + +L E+ NP++ F V++ + +
Sbjct: 5 NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFA----FNGVMQGFARSNN 60
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-----LVHLMFKNSRHKFKVVPN 184
E A + + + + + S + L++ L + + D L ++ + P+
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQ------TPS 114
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
+ + L++AL K V+ A + DEM G P+ + ++ G G +++A F
Sbjct: 115 MQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFK 174
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ G P+ Y VL+ G G+L A + EM+ + P+ VTY +++A CK +
Sbjct: 175 QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKAR 234
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ E L + M YVP+ +I LC G++E A E++ +L C P+ +
Sbjct: 235 RVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV-E 422
T+I LC+ K+ +A++LF++ + I P + YN+LIAG C+ + EA +L+ +M
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G++P + T+N LI GFCK+G ++ EM KG + ++ +LI GL
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGL 406
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 196/450 (43%), Gaps = 49/450 (10%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R N++ A +++ + + + +YH +IH LA+ D +L+E+
Sbjct: 57 RSNNMEKAREVYQHM--VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM-------- 106
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LV 168
V+R S+++ ++L+ AL + +R D L
Sbjct: 107 -------VMRGQ---------------------TPSMQAYSSLVRALAKARRVDHASSLF 138
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
M + H P+ LI LC+ V+ A +MP G PN+ + +L
Sbjct: 139 DEMIRGGHH-----PDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLH 193
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G G +E A +F ++ PD TY L+D K R+ + K+ + M G P
Sbjct: 194 GLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVP 253
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N +T+ +I C+ + +A + ML+ P+ +I LC KV A EL+
Sbjct: 254 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELF 313
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCE 406
+++ + PD +++I CK G + EA+KL+ E G+ P+++T+NTLI G C+
Sbjct: 314 EKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCK 373
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+L A L +M KG+ + TY +LI G + E + + ++M +K + S
Sbjct: 374 LGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVS 433
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ GL ++GN + V SG+V
Sbjct: 434 CVSFVGGLCKTGNIDQAYAVFEATRKSGAV 463
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + N+ T+++I+ V E + +V +++ G PD + +M G+ +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ A +V M ++G +P+ V+Y ++I K K E+ +L +M+ R PS
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
++ L + +V+ A L+ ++R PD + +I LC+ GK+ +A + F + + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ YN L+ G+C S +L +A L+ +M P+V TYN L+ CK +EG
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ E M G PN +FS LI GL +G
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTG 269
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 71/376 (18%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTEL--------------------------------KQ 106
Y S++ LA+AR D SL E+ KQ
Sbjct: 116 QAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQ 175
Query: 107 NPEIKCGENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
P+ C N+ + + +GL +G+ E A F ++ + V + NTLL+A+ + +R
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ +F+ R VPNV T + LI LC+ ++E A+ V M G PN T+T
Sbjct: 236 VEEGCKLFEAMRAA-GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294
Query: 225 TIL-----------------------------------GGYVWRGDIENAKRVFGDILD- 248
T++ GY RG ++ A++++ ++
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P T+ L+DG+ KLG+L A +++ EM G+ + TY ++I + K E
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A + M ++K++ C + LC+ G ++ A +++ + +P+ +
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474
Query: 369 WLCKEGKIWEAKKLFD 384
L K G++ +A+KL +
Sbjct: 475 SLIKLGRVEDAQKLME 490
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
D+ + TY+ ++ +K + ++ KV++EM G P+ + +++ F +
Sbjct: 3 DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNME 62
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+AR + M++ Y P + +I L + GK++++ ++ ++ + P S+++
Sbjct: 63 KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L K ++ A LFDE RG P L + LI G+C++ ++ +A + M + G +
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PNV YN+L+ G C G ++ + EM C P+ +++ L++ + ++ E K+
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242
Query: 487 VSMATASGSV 496
A+G V
Sbjct: 243 FEAMRAAGYV 252
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++ TY+++I + + A+ E+ ++ ++M+ G P+VF +N ++QGF + N ++ +
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD- 511
+ M++ G P+ S+ +LI GL + G E K++S G S L R ++
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
Query: 512 --LDSGAGALDELL 523
+D + DE++
Sbjct: 129 RRVDHASSLFDEMI 142
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + NVFTY+ +I+ K +E ++LEEM+ GC P+ +F+ +++G S N
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRI--VSDLDSGAGALDELLVK 525
+ +V SG ++ S++ L+ + + LD L E++++
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMR 109
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 252/558 (45%), Gaps = 91/558 (16%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGK-FHPNFSHNYDTYHSIIHKLARARA 93
+K R+ + S++ Q + L ++F ++ K +H D II KL + A
Sbjct: 52 LKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQDL---IIGKLIKENA 108
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
F+ +L ELK N IK F +I Y AG E AV++F + F+ + + + N
Sbjct: 109 FELYWKVLQELK-NSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFN 167
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+ LV+ + + L+ L N K + P+V T ILI LCK + A+ + DEM
Sbjct: 168 LILHFLVRKEAF-LLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G++PN + ++ +L G I +A+R+F + G D TY VL++G+ K G L D
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDD 286
Query: 274 AVKVMDEMEDNG-----------------------------------VEPNEVTYGVMIE 298
A ++ + +G ++P+ + Y +MI
Sbjct: 287 AFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIR 346
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + EA LL +M +R P + +I C+ G +++A L + + +C P
Sbjct: 347 GLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFP 406
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+N S +I +CK G I +A+ +F E E+ G +PS++T+N+LI G+C++ L EA L+
Sbjct: 407 NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLF 466
Query: 418 DDM------------------------------------------------VEKGVEPNV 429
M V+ GV P++
Sbjct: 467 YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN+LI GFCK GN ++ +EM KG P+ ++ LI+GLY +G + ++
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586
Query: 490 ATASGSV-ESDSWNFLLT 506
G V ES ++ ++T
Sbjct: 587 MVKKGCVPESSTYKTIMT 604
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 152/304 (50%), Gaps = 15/304 (4%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+N L + +RY+ H+ ++ + + P+V I+I+ L ++ V A+ +L EM
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRE-NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ P+ + + ++ G+ G ++ A+ + +I P+ TY++L+ G K G + A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-LQRK---YVPSSALCCK 330
+ EME G P+ VT+ +I CK + EAR L M + RK ++ S K
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487
Query: 331 VIDL---------LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
V D+ LCE G + A +L +L+ +PD + +I+ CK G I A K
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFK 547
Query: 382 LFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LF E + +G +P +TY TLI G+ + +A +++ MV+KG P TY ++ C
Sbjct: 548 LFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607
Query: 441 KIGN 444
+ N
Sbjct: 608 RENN 611
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 19/323 (5%)
Query: 81 YHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y +I+ L RAR ++ + L++N IK L+ +IR GR A+
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLREN--IKPDVMLYTIMIRGLSQEGRVTEALTLLGE 363
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + ++ N L+ D L + S+H PN T +ILI +CK
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD--CFPNNHTYSILICGMCKN 421
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI-----------L 247
+ A + EM +G +P++VT +++ G +E A+ +F + L
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481
Query: 248 DRGW--VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+G V D + V+M+ + G + A K++ ++ D+GV P+ TY ++I FCK
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A L +M + ++P S +ID L G+ EDA E+++++++K C+P+++ T
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601
Query: 366 IIHWLCKEGKIWEAKKLFDEFER 388
I+ W C+E I A ++ ++ R
Sbjct: 602 IMTWSCRENNISLALSVWMKYLR 624
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+P++ T NILI CK ++ GA ++ EM G +P+ VT+ T++ G G E+A
Sbjct: 522 VLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDAL 581
Query: 241 RVFGDILDRGWVPDATTYTVLMD----------------GYIKLGR-------------- 270
+F ++ +G VP+++TY +M Y++ R
Sbjct: 582 EIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESF 641
Query: 271 ----LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
L A++ + EM+ + Y + + + K+ EA + + K SSA
Sbjct: 642 DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSA 701
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPD--NAISSTIIHWLCKEGKIWEAKKL 382
C +I LC ++ A +++ L + MP N + ++H K+ ++ A ++
Sbjct: 702 SCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRM 761
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 244/462 (52%), Gaps = 28/462 (6%)
Query: 31 VTPPIKPWPQRLY-PKR---------LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDT 80
+TP + P P+ L P+R V++I +++ AL+IF+ + F+HN+ T
Sbjct: 27 LTPKLDPPPKTLLEPRRKPKFISHETAVNLIKHERDPQHALEIFNLVVE-QKGFNHNHAT 85
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y +II KLARA+ F AV++LL ++ K E+LF+ +++ + + E V+ F +I
Sbjct: 86 YSTIIDKLARAKKFQAVDALLRQMMYET-CKFHESLFLNLMKYFAKSSEFERVVEMFNKI 144
Query: 141 EKFNVQR-SVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ S+++++T LN LV++K+ DL+ L+ N H K PN NI IK CK
Sbjct: 145 QPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLK--PNTCIFNIFIKYHCK 202
Query: 198 KDDVEGAIRVLDEMPSMGM-VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDA 255
D+E A V+ EM + PNL+T++T++ G G ++ A +F +++ + + PDA
Sbjct: 203 SGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDA 262
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY VL++G+ G++ A K+M+ M+ NG PN Y ++ FCK + EA + ++
Sbjct: 263 LTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEE 322
Query: 316 M----LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
M L++ V + L I+ C G++++A L + + C D + ++ C
Sbjct: 323 MKIFGLKQDTVGYTIL----INYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFC 378
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
EG+ EA + + G + +Y ++ +C+ +L +A L + +G P+
Sbjct: 379 GEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHA 438
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
T N L+ G CK G A + + L + + G P + S++LL+E
Sbjct: 439 TSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVE 480
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 168/341 (49%), Gaps = 2/341 (0%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
L ++ D + L +L ++ +K +F I+ + +G E A ++K ++
Sbjct: 164 LVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISY 223
Query: 148 -SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
++ + +TL++ L ++ R +F+ K +++P+ T N+LI V+ A +
Sbjct: 224 PNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKK 283
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+++ M S G PN+ ++ ++ G+ G +E A F ++ G D YT+L++ +
Sbjct: 284 IMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFC 343
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
+ GR+ +A+ +++EM++ + + VT V++ FC ++ EA +L+ + + A
Sbjct: 344 RFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKA 403
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDE 385
V++ LC++G ++ A EL L + +P +A S+ ++ LCK G +A L+
Sbjct: 404 SYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGL 463
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
E G P ++ L+ +C +L A L D++ E
Sbjct: 464 AEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANECE 504
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 178/373 (47%), Gaps = 7/373 (1%)
Query: 130 PELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
P+ A++ F L +E+ + + +T+++ L + K++ V + + ++
Sbjct: 63 PQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCKFHESLFL 122
Query: 189 NILIKALCKKDDVEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI- 246
N L+K K + E + + +++ P + P+L +T L V ++ + D+
Sbjct: 123 N-LMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLDLN 181
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKK 305
D P+ + + + + K G L A V+ EM+ + + PN +TY +++ C+ +
Sbjct: 182 KDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGR 241
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
EA L ++M+ + + AL V I+ GKV+ A ++ + + C P+ S
Sbjct: 242 LKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYS 301
Query: 365 TIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ CKEG++ EA F+E + G + Y LI C + EA L ++M E
Sbjct: 302 ALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKET 361
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ ++ T N+L++GFC G +E + +L + +G + NK S+ +++ L + G+ +
Sbjct: 362 KCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKA 421
Query: 484 GKVVSMATASGSV 496
+++ + + G V
Sbjct: 422 LELLGLTLSRGFV 434
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q+ + + A +ID L K + L ++++ + C ++ ++ + K +
Sbjct: 76 QKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCKFHESLFLNLMKYFAKSSEFE 135
Query: 378 EAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTE-AGRLWDDMVEKGVEPNVFTYNM 434
++F++ + PSL +T + + ES ++ G L D + ++PN +N+
Sbjct: 136 RVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNI 195
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKG-CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
I+ CK G+ + +++EM +PN ++S L++GL ESG E ++ +
Sbjct: 196 FIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSK 255
Query: 494 GSVESDSWNF 503
+ D+ +
Sbjct: 256 DQILPDALTY 265
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 229/443 (51%), Gaps = 25/443 (5%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI 118
L L+ F+++ + N +++ + +++ LA A+ + + S+L + E C +L
Sbjct: 89 LVLRYFNWSRR-ELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKG-ETNCSISLIF 146
Query: 119 ------------------TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
++ Y + L ++ F R + + SV S N LL+ALV
Sbjct: 147 HSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALV 206
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ + V ++K + K+ PN+ T N +I LCK + A V+D+M G PN+
Sbjct: 207 KENEFGGVEFVYKEMIRR-KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNV 265
Query: 221 VTHTTILGGYVWRGDI---ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
VT+ T++ GY G + A + ++++ P++ T+ VL+DG+ K L+ A+KV
Sbjct: 266 VTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKV 325
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+EM+ G++P VTY ++ C K EA+ LLD+ML P+ +I+ C+
Sbjct: 326 FEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLT 396
+ +E+A EL+ + ++ P+ +T++H CK GK+ EA L E+G +P+ T
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN LI G C ++ E L ++M +GV+ + TYN+LI +C+ K+ R+++EML
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505
Query: 457 DKGCFPNKTSFSLLIEGLYESGN 479
DKG P+ ++++L+ G GN
Sbjct: 506 DKGLKPSHLTYNILLNGYCMEGN 528
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 202/408 (49%), Gaps = 24/408 (5%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR------------HKFKVVPNVFTCN 189
+ NV S+ + LLN L K Y + + + H V F N
Sbjct: 100 ELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCAN 159
Query: 190 ILIKALCKKDDVEGAIRVL--DEMPSMG---MVPNLVTHTTILGGYVWRGDIENAKRVFG 244
+I + VE + VL + G ++++ +L V + + V+
Sbjct: 160 SIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYK 219
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ R P+ T+ +++G K+G+L A V+D+M+ G PN VTY +I+ +CK
Sbjct: 220 EMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMG 279
Query: 305 KSGE---ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ G+ A +L +M++ K P+S +ID C++ + A ++++ + + P
Sbjct: 280 RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV 339
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+++++ LC EGK+ EAK L DE ++ P+++TYN LI G C+ L EA L+D++
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
++G+ PNV T+N L+ G+CK G +E + + ML+KG PN ++++ LI G G
Sbjct: 400 GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459
Query: 481 GEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSGAGA--LDELLVK 525
EV +++ G ++ ++N L++ + A +DE+L K
Sbjct: 460 EEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 181/349 (51%), Gaps = 7/349 (2%)
Query: 74 FSHNYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
F N TY+++I K+ R +++L E+ +N ++ F +I +
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVEN-KVSPNSVTFNVLIDGFCKDENL 319
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
A+K F ++ ++ +V + N+L+N L + + ++ + + PNV T N
Sbjct: 320 SAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLL-DEMLSSNLKPNVITYNA 378
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI CKK +E A + D + G+ PN++T T+L GY G +E A + +L++G
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
++P+A+TY L+ G+ + G++ + +++EM+ GV+ + VTY ++I A+C+ K+ +A
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAA 498
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L+D+ML + PS +++ C EG + A L K++ ++ + + +I
Sbjct: 499 RLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGY 558
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTE-AGRLW 417
C++GK+ +A L +E E+G IP+ TY + M E L + G L+
Sbjct: 559 CRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLY 607
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 229/429 (53%), Gaps = 6/429 (1%)
Query: 48 VSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN 107
+++I R+++ AL+IF+ + F+HN TY +I+ KLA+ + F AV+ +L ++
Sbjct: 137 INLIKREKDPQHALKIFNMVSE-QKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYE 195
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR-SVRSLNTLLNALVQNKRYD 166
K E +FI ++++Y G E FL I+ ++ S +++++ LN LV + + D
Sbjct: 196 A-CKFHEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVD 254
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-PSMGMVPNLVTHTT 225
LV + ++ PNV NIL+K C++ D++ A V+ EM S PN++T++T
Sbjct: 255 LVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYST 314
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ G G ++ A +F +++ + VPD TY VL++G+ + G+ A V++ M++N
Sbjct: 315 LMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNN 374
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G PN Y +++ CK K +A+ +L +M P + +I+ G++++A
Sbjct: 375 GCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEA 434
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
EL + +C D + I+ LC+EG+ EA + ++ ++G + +Y ++
Sbjct: 435 IELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNS 494
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ ++ EL +A +L M+ +G P+ T N L+ CK G A + L +++D G P
Sbjct: 495 LTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQ 554
Query: 464 KTSFSLLIE 472
S+ LLI+
Sbjct: 555 HDSWELLID 563
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 110/212 (51%), Gaps = 5/212 (2%)
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSALCCKVIDLLCEEGKVEDAC 345
+PN + ++++ C+ A ++ +M KY P+ ++D LC G++++A
Sbjct: 270 KPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAF 329
Query: 346 ELWKRLLRKN-CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIA 402
EL++ ++ K+ +PD + +I+ C+EGK A+ + EF + G P++ Y+ L+
Sbjct: 330 ELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVI-EFMKNNGCCPNVFNYSALVD 388
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ +L +A + +M G++P+ TY LI F + G E I +L EM + C
Sbjct: 389 GLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQA 448
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ +F++++ GL G E ++ G
Sbjct: 449 DTVTFNVILGGLCREGRFDEALDMIEKLPQQG 480
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
TY+ +I+ R D +++ +K N C N+F GL AG+ + A
Sbjct: 347 TYNVLINGFCREGKADRARNVIEFMKNN---GCCPNVFNYSALVDGLCKAGKLQDAKGVL 403
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ ++ + +L+N +N + D + L+ + + + + T N+++ LC
Sbjct: 404 AEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQA--DTVTFNVILGGLC 461
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + A+ +++++P G+ N ++ +L ++ A ++ G +L RG+VP
Sbjct: 462 REGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYA 521
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T L+ K G DA + ++ D G +P ++ ++I+ C+ +K LLD++
Sbjct: 522 TSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDEL 581
Query: 317 L 317
+
Sbjct: 582 V 582
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 235/456 (51%), Gaps = 23/456 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE----NLFITVIRNYGLAGRPEL 132
N TY + I ++A + + E+ + CG ++ +I + G
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEM-----LSCGVLPNVGIYTALIEGHCKEGNVTE 574
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A F I V + V++ + L++ L +N + +F + K ++PN FT N LI
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK-GLLPNAFTYNSLI 633
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK+ +V+ A ++L+EM G+ P++VT+ ++ G G+IE AK +F DI RG
Sbjct: 634 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 693
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY ++DGY K T A ++++EM GV P+ Y V++ CK +K +A +L
Sbjct: 694 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 753
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ML++ + + + +I+ C+ GK+++A L + ++ K +P++ +++I CK
Sbjct: 754 FQEMLEKGFASTVSFN-TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 812
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EAK+L+ E ER +P+ TY +L+ G ++E L+++MV KG+EP+ T
Sbjct: 813 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 872
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF-------SLLIEGLYESGNEGEVG 484
Y ++I +C+ GN E ++ +E+L KG P K+ F S++ G +GN E
Sbjct: 873 YYVMIDAYCREGNVMEACKLKDEILVKG-MPMKSGFRLGLPTCSVIARGFQIAGNMDEAA 931
Query: 485 KVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALD 520
+V+ G V + + L +V +GA + D
Sbjct: 932 EVLRSMVKFGWVSNTTS---LGDLVDGNQNGANSED 964
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 208/407 (51%), Gaps = 4/407 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S+I +A+ + + L E+ + ++ + + I Y AG E+A + F +
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLER-RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 547
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V +V L+ + +F+ + +V+ +V T ++LI L +
Sbjct: 548 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR-RVLQDVQTYSVLIHGLSRNGK 606
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A + E+ G++PN T+ +++ G +G+++ A ++ ++ +G PD TY +
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+DG K G + A + D++E G+ PN VTY M++ +CK K A LL++ML R
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + + +++ C+E K E A +L++ +L K +T+I CK GK+ EA
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEAN 785
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L +E E+ IP+ +TY +LI C++ + EA RLW +M E+ V P TY L+ G+
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 845
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
IGN E + EEM+ KG P+K ++ ++I+ GN E K+
Sbjct: 846 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 210/405 (51%), Gaps = 11/405 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCG--ENLFI--TVIRNYGLAGRPELAVK 135
TY+++I R + + E+ + CG NL I T++ AG+ E A++
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEM-----VACGIEANLIIWNTLLNGVCKAGKMEKALE 367
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + V+ ++ + L+ + + + + K K+ P V T +++I L
Sbjct: 368 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK-KRKLAPTVLTYSVIINGL 426
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ +++G +L EM G+ PN V +TT++ + G +E ++ + + ++G +PD
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+ G+ K R+ +A + EM + + PN TYG I+ + K + A ++
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML +P+ + +I+ C+EG V +A +++ +L + + D S +IH L + GK
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EA +F E E+G +P+ TYN+LI+G C+ + +A +L ++M KG+ P++ TYN+
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
LI G CK G + + +++ +G PN +++ +++G +S N
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 203/424 (47%), Gaps = 54/424 (12%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F ++ +Y G AV FL + F + S+ S N+LL L++ + +L +F +
Sbjct: 156 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF-DG 214
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP--------------SM---GMVP 218
KV+P+V+T +I A CK +V+ A RVL EM SM G+VP
Sbjct: 215 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVP 274
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI------------ 266
+L T+ ++ G+ AK + +++D G P+ TY L+DG++
Sbjct: 275 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 334
Query: 267 -----------------------KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
K G++ A+++M EM + GVEP+ TY ++IE C+G
Sbjct: 335 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 394
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ A LLD+M +RK P+ +I+ LC G ++ + + ++ P+ +
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+T++ KEG++ E++ + + E+G +P + YN+LI G C++ + EA +M+E
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ + PN TY I G+ K G + R EML G PN ++ LIEG + GN E
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574
Query: 483 VGKV 486
V
Sbjct: 575 AFSV 578
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 160/344 (46%), Gaps = 31/344 (9%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTC-------------NILIKALCKKDDVEGAIRVLDEMP 212
DL+ + +NS V+ ++ C ++L+ + K + A+ V
Sbjct: 122 DLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPK 181
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ P+L++ ++LG + +E +VF + +PD TYT ++ + K+G +
Sbjct: 182 NFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVK 241
Query: 273 DAVKVMDEME-----------------DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
DA +V+ EM D G+ P+ TY ++I FC K+S EA+ +L +
Sbjct: 242 DAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLE 301
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+ P +ID +G +E A + ++ + I +T+++ +CK GK
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 361
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A ++ E E+G P TY+ LI G C + A L D+M ++ + P V TY++
Sbjct: 362 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 421
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+I G C+ GN + IL EM+ G PN ++ L+ + G
Sbjct: 422 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 465
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 152/329 (46%), Gaps = 27/329 (8%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYA--GKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P L+S +Q N+D A Q+ +P+ TY+ +I L +A +
Sbjct: 624 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV----TYNILIDGLCKAGEIER 679
Query: 97 VESLLTELKQNPEIKCGENL------FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
++L +++ G L + ++ Y + P A + + V
Sbjct: 680 AKNLFDDIE-------GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 732
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
N +LN + ++++ +F+ K + + N LI+ CK ++ A +L+E
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEGYCKSGKLQEANHLLEE 790
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M +PN VT+T+++ G + AKR++ ++ +R +P A TYT L+ GY +G
Sbjct: 791 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 850
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL--- 327
+++ + +EM G+EP+++TY VMI+A+C+ EA L D++L + S
Sbjct: 851 MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLG 910
Query: 328 --CCKVIDLLCE-EGKVEDACELWKRLLR 353
C VI + G +++A E+ + +++
Sbjct: 911 LPTCSVIARGFQIAGNMDEAAEVLRSMVK 939
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 22/224 (9%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
PN V + ++++++ K EA N+ ++ PS C ++ L + KVE ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCES 407
+ + +PD + +I CK G + +AK++ E M E
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLE------------------MGEK 253
Query: 408 AEL-TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
A L EA L MV+KG+ P+++TY++LI GFC ++E +L EM+D G P +
Sbjct: 254 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 313
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRI 508
++ LI+G G+ + ++ A G +E++ WN LL +
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACG-IEANLIIWNTLLNGV 356
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/577 (25%), Positives = 258/577 (44%), Gaps = 95/577 (16%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPWP---QRLYP---KRLVSMIFRQQNL-DLALQIFHYA 67
L + GA S +TV + P ++L P +V+ + R+Q +L + F +
Sbjct: 28 LFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWT 87
Query: 68 GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA 127
+ ++ T++ +I LA+ FD +L ELK N I+ F +I Y +
Sbjct: 88 TRRRS--FRSWVTHNLVIDMLAKDDGFDTYWKILEELK-NSNIQIPPPTFSVLIAAYAKS 144
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G E AV++F +++ F + V + N++L+ +VQ + + L+ L N K PN T
Sbjct: 145 GMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVF-LLALAVYNQMLKLNYNPNRAT 203
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
IL+ LCK + A+++ DEM G+ PN + +T IL G ++ R+ +
Sbjct: 204 FVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK 263
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVM----------------------------D 279
G PD+ T L+DG+ KLG++ +A ++ D
Sbjct: 264 VSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYD 323
Query: 280 EMED-------NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
E+++ G+EP+ V Y ++I FC+ A N+L+DM QR P + +I
Sbjct: 324 EVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALI 383
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSI 391
C+ G ++ A L + + +C P + + +I +C+ G + EA+++F++ E G
Sbjct: 384 KGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCS 443
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLW----------------------------DDMVEK 423
PS++T+N LI G+C++ EL EA L+ MVE+
Sbjct: 444 PSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVER 503
Query: 424 --------------------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
GV P++ TYN+LI GFCK N ++ E+ KG P+
Sbjct: 504 LCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPD 563
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
++ LI+G + E + +V+ +G S +
Sbjct: 564 SVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSA 600
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 199/444 (44%), Gaps = 57/444 (12%)
Query: 80 TYHSIIHKLARARAFD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+SI+H + + F AV + + +L NP F+ ++ G+ + A+K
Sbjct: 168 TYNSILHVMVQKEVFLLALAVYNQMLKLNYNP----NRATFVILLNGLCKNGKTDDALKM 223
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + + +L+ L Q KR D VH + N+ P+ TCN L+ C
Sbjct: 224 FDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLL-NTMKVSGCCPDSITCNALLDGFC 282
Query: 197 KKDDVEGAIRVLD-----------------------------------EMPSMGMVPNLV 221
K ++ A +L +M G+ P++V
Sbjct: 283 KLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVV 342
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+T ++ G+ G ++ A + D+ RG PD Y L+ G+ +G L A + E+
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
N P TY ++I C+ EAR + + M PS +ID LC+ G++
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462
Query: 342 EDACELWKRL---------LR----KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
E+A L+ ++ LR + + D A T++ LC+ G I +A KL + +
Sbjct: 463 EEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLAD 522
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G +P ++TYN LI G C++ + A +L+ ++ KG P+ TY LI GF ++ ++
Sbjct: 523 SGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREED 582
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
R+L++M+ GC P+ + L+
Sbjct: 583 AFRVLDQMVKNGCTPSSAVYKCLM 606
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 195/421 (46%), Gaps = 33/421 (7%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y S+I L RA+ +D V+ ++ + P++ L+ +IR + G + A+
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVV----LYTILIRGFCEVGMVDYALNML 364
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV-----VPNVFTCNILI 192
+ QR + NAL+ K + V L+ K + ++ P T ILI
Sbjct: 365 NDM----TQRGLSPDTYCYNALI--KGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILI 418
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI------ 246
+C+ ++ A ++ ++M ++G P+++T ++ G G++E A+ +F +
Sbjct: 419 CGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNP 478
Query: 247 -----LDRGW--VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
L +G V D + +++ + G + A K++ ++ D+GV P+ +TY V+I
Sbjct: 479 SLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLING 538
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FCK K A L ++ + + P S +ID + EDA + ++++ C P
Sbjct: 539 FCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPS 598
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG-MCESAELTEAGRLWD 418
+A+ ++ W C++GK+ A L+ ++ R S+PS +A E EL +A R
Sbjct: 599 SAVYKCLMTWSCRKGKLSVAFSLWLKYLR-SLPSQEDETLKLAEEHFEKGELEKAVRCLL 657
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M K + Y + + G C+ ++E ++I + + N S +LI GL + G
Sbjct: 658 EMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDG 717
Query: 479 N 479
N
Sbjct: 718 N 718
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 195/436 (44%), Gaps = 37/436 (8%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK-FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
L+ +FR + D ++ + K F + Y +I D ++L ++
Sbjct: 312 LIDGLFRAKRYD---EVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 106 Q---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
Q +P+ C + +I+ + G + A L I K + + + L+ + +N
Sbjct: 369 QRGLSPDTYC----YNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRN 424
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL-- 220
D +F N P++ T N LI LCK ++E A + +M +G P+L
Sbjct: 425 GLLDEARQIF-NQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFL 482
Query: 221 --------VTHTTILGGYVWR----GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
V T L V R G I A ++ + D G VPD TY VL++G+ K
Sbjct: 483 RLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKA 542
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+ A K+ E++ G P+ VTYG +I+ F + + +A +LD M++ PSSA+
Sbjct: 543 KNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVY 602
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMP---DNAISSTIIHWLCKEGKIWEAKKLFDE 385
++ C +GK+ A LW + LR +P D + H+ ++G++ +A + E
Sbjct: 603 KCLMTWSCRKGKLSVAFSLWLKYLRS--LPSQEDETLKLAEEHF--EKGELEKAVRCLLE 658
Query: 386 --FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
F+ + + Y + G+C++ EA +++ + E ++ N + MLI G CK G
Sbjct: 659 MNFKLNNF-EIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDG 717
Query: 444 NAKEGIRILEEMLDKG 459
N + + I L+KG
Sbjct: 718 NLEMAVDIFLYTLEKG 733
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 191/325 (58%), Gaps = 2/325 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN++T N +I LCK V+ A RVL EM + G+VP+ V +TT++ G+ G+I+ A ++
Sbjct: 43 PNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKL 102
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ + VPD YT ++ G + G++ +A KV ++M GVEP+EVTY +I+ +CK
Sbjct: 103 FDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCK 162
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A +L + M+Q P+ + D LC+ G+V+ A EL + K +
Sbjct: 163 SGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICT 222
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++++ LCK G I +A KL +E E G P +T+ TL+ C++ E+ +A L +M+
Sbjct: 223 YNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML 282
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++G++P V T+N+L+ GFC G ++G R+L ML+KG PN T+++ L++ N
Sbjct: 283 DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMR 342
Query: 482 EVGKVVSMATASGSV-ESDSWNFLL 505
++ A G + +S+++N L+
Sbjct: 343 CTTEIYKGMCARGVMPDSNTYNILI 367
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 189/368 (51%), Gaps = 2/368 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ TVI Y L G + +K ++ ++ ++ + N+++ L ++ + D + +
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
++ +VP+ LI CK +++ A ++ DEM +VP+ + +T ++ G G +
Sbjct: 73 NQ-GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A +VF + RG PD TYT L+DGY K G + A + ++M +G+ PN VTY +
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ CK + A LL +M + + +++ LC+ G + A +L + +
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD +T++ CK G++ +A +L E +RG P+++T+N L+ G C S L + R
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGER 311
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L M+EKG+ PN TYN L++ +C N + I + M +G P+ ++++LI+G
Sbjct: 312 LLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC 371
Query: 476 ESGNEGEV 483
++ N E
Sbjct: 372 KARNMKEA 379
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 152/269 (56%), Gaps = 1/269 (0%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G P++V+++T++ GY G+++ ++ ++ +G P+ TY ++ K G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ DA +V+ EM + G+ P+ V Y +I+ FCK A L D+M +++ VP
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
VI LC GK+ +A +++ ++ + PD +T+I CK G++ +A L ++ + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+++TY L G+C+ ++ A L +M KG++ N+ TYN L+ G CK GN ++ +
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+++EEM G +P+ +F+ L++ ++G
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTG 269
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 193/404 (47%), Gaps = 3/404 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+SII L ++ D E +L E+ N I ++ T+I + G + A K
Sbjct: 44 NLYTYNSIILLLCKSGKVDDAERVLREMI-NQGIVPDTVVYTTLIDGFCKLGNIQAAYKL 102
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +EK + + ++ L + + +F N V P+ T LI C
Sbjct: 103 FDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVF-NKMFSRGVEPDEVTYTTLIDGYC 161
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++E A + ++M G+ PN+VT+T + G G ++ A + ++ +G +
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNIC 221
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L++G K G + AVK+M+EME G+ P+ +T+ +++A+CK + +A LL +M
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L R P+ +++ C G +ED L +L K MP+ ++++ C +
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM 341
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+++ RG +P TYN LI G C++ + EA L +M EKG +YN +
Sbjct: 342 RCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSI 401
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I+GF K E + EEM +G + ++L ++ Y GN
Sbjct: 402 IKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGN 445
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%)
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
RG P +++Y+T+I G C EL + +L +M KG++PN++TYN +I CK G +
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
R+L EM+++G P+ ++ LI+G + GN
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G P+V +Y+ +I G+C G ++ +++++EM KG PN +++ +I L +SG +
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 483 VGKVVSMATASGSV 496
+V+ G V
Sbjct: 64 AERVLREMINQGIV 77
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 9/365 (2%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ S N LL L + Y + ++ R + P++FT +IL LC + V A+ +
Sbjct: 91 ISSFNRLLGGLAKINHYSQLFSLYNEMRLA-GLSPDLFTLSILANCLCNVNRVSEALAAM 149
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+ G +PN+VT+TT++ G I A R+F + G P+A TY L+ G +
Sbjct: 150 AGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQT 209
Query: 269 GRLTDAVKVMDEMEDNGVE------PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
G + A+K+ EM ++ + P +TY ++I+ CK + EA+ L ++M + +
Sbjct: 210 GNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMI 269
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I C GK + + L+ ++ + PD S +I LCKEGK+ EAKKL
Sbjct: 270 PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL 329
Query: 383 FD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ +RG +P+L+TYN+LI G C +L A L+ M KG+EP+ +Y LI G+CK
Sbjct: 330 LEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCK 389
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDS 500
KE + + EML G PN T++ L++GL++ G G+ K+ M T S S
Sbjct: 390 TWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQI 449
Query: 501 WNFLL 505
+ L
Sbjct: 450 YGIFL 454
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 211/412 (51%), Gaps = 41/412 (9%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-- 174
+ T+I+ + R A + FLR++K + + TL+ L Q ++ + K
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223
Query: 175 ---SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
S++ P V T +I+I LCK + A + +EM + GM+P++++++T++ G+
Sbjct: 224 NDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC 283
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD------------ 279
G + +K +F +++D+G PD T++VL+D K G++T+A K+++
Sbjct: 284 CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343
Query: 280 -----------------------EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
M G+EP+E++Y +I +CK K EA NL ++M
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
LQ P+ ++ L ++GKV DA +L+ + ++ I + LCK +
Sbjct: 404 LQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCL 463
Query: 377 WEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+EA +LF+E + + ++ Y+ LI G+C++ +L A L++ + ++G++P+V TYN++
Sbjct: 464 FEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIM 523
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
I GFCK+G + E+M + GC P+ +++ L+ G E EV K++
Sbjct: 524 IHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLL 575
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 208/410 (50%), Gaps = 19/410 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPE---IKCGENLFITVIRNYGL--AGRPE 131
N TY ++I L + + L E+ + + C + I GL GR +
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNV 185
A + F ++ + V S +TL++ ++D S+H F V P++
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWD-------QSKHLFDEMVDQGVQPDM 307
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T ++LI LCK+ V A ++L+ M G+VPNL+T+ +++ G+ GD+ +A+ +F
Sbjct: 308 VTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLS 367
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ +G PD +YT L++GY K ++ +A+ + +EM G PN TYG +++ + K
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGK 427
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
G+A+ L M +S + +D LC+ + +A EL+ L N + S
Sbjct: 428 VGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSC 487
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I LCK GK+ A +LF++ + G P ++TYN +I G C+ ++ A L++ M E G
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
P++ YN L+ GFC+ +E I++L +M+ K PN S +++++ L
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 209/429 (48%), Gaps = 21/429 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLAL----QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P + L+ + + N+++AL ++ + A ++ N TY II L +
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253
Query: 95 DAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
D + L E+K P++ + T+I + AG+ + + F + VQ + +
Sbjct: 254 DEAKELFEEMKAQGMIPDVIS----YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVT 309
Query: 152 LNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+ L++ L + + L+ +M + +VPN+ T N LI C D+ A +
Sbjct: 310 FSVLIDTLCKEGKVTEAKKLLEVMIQRG-----IVPNLITYNSLIDGFCMVGDLNSAREL 364
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
MPS G+ P+ +++TT++ GY ++ A ++ ++L G P+ TTY L+ G +
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQ 424
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G++ DA K+ M+ GV N YG+ ++ CK EA L +++ + +
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIEN 484
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ID LC+ GK+E A EL+++L ++ PD + +IH CK G++ A LF++ E
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKME 544
Query: 388 R-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
G P ++ YNTL+ G CE +L E +L MV+K V PN + +++ CK K
Sbjct: 545 ENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYK 604
Query: 447 EGIRILEEM 455
+ + +L +
Sbjct: 605 KFVDLLPKF 613
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 159/317 (50%), Gaps = 10/317 (3%)
Query: 196 CKKDDVEG--AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK ++ A D M +P + + +LGG ++ ++ G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T ++L + + R+++A+ M + G PN VTY +I+ C + EA L
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK------NCMPDNAISSTII 367
M + P++ +I LC+ G V A +L K +L NC P S II
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK G+ EAK+LF+E + +G IP +++Y+TLI G C + + ++ L+D+MV++GV+
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P++ T+++LI CK G E ++LE M+ +G PN +++ LI+G G+ ++
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364
Query: 487 VSMATASGSVESDSWNF 503
++ S +E D ++
Sbjct: 365 F-LSMPSKGLEPDEISY 380
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 11/284 (3%)
Query: 243 FGDILDRGW-VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
F D++ R +P +++ L+ G K+ + + +EM G+ P+ T ++ C
Sbjct: 78 FFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLC 137
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ EA + +L+R Y+P+ +I LC E ++ +A L+ R+ + C P+
Sbjct: 138 NVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAV 197
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-------FERGSIPSLLTYNTLIAGMCESAELTEAG 414
T+I LC+ G + A KL E + P ++TY+ +I G+C+ EA
Sbjct: 198 TYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAK 257
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+++M +G+ P+V +Y+ LI GFC G + + +EM+D+G P+ +FS+LI+ L
Sbjct: 258 ELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTL 317
Query: 475 YESGNEGEVGKVVSMATASGSVES-DSWNFLLTR--IVSDLDSG 515
+ G E K++ + G V + ++N L+ +V DL+S
Sbjct: 318 CKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENL 116
A+++F+ + NF N + Y +I L +A + L +L Q P++
Sbjct: 466 AMELFNELKSY--NFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVV----T 519
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNS 175
+ +I + G+ + A F ++E+ + + NTLL + NK +++ L+ K
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+ V PN +C I++ LCK + + + +L + P
Sbjct: 580 QKD--VSPNAASCTIVVDMLCKDEKYKKFVDLLPKFP 614
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 197/400 (49%), Gaps = 38/400 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S++H L +ARA D E+ L ++ N + + +I Y G+ + AV+ F
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQM-VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 317
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ RH ++P+V T ++L+ +LCK
Sbjct: 318 MR----------------------------------RHS--ILPDVVTLSMLMGSLCKYG 341
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G P++ ++ +L GY +G + + +F +L G PD T+
Sbjct: 342 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 401
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+P+ VTY +I A C+ K +A + M+ +
Sbjct: 402 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I C G + A EL ++ D S+II+ LCK G++ +A
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 521
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P + YN L+ G C ++ +A R++D MV G+EPNV Y L+ G
Sbjct: 522 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 581
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CKIG EG+ + EML +G P+ +S++I+GL+E+G
Sbjct: 582 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ ++ N LL + KR D + + + VP+VF
Sbjct: 127 AHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVF 186
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ +IL+K+LC + A +L M G V PN+V + T++ G+ GD+ A +F
Sbjct: 187 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY ++ K + A + +M + V PN TY +I +
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 306
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M + +P ++ LC+ GK+++A +++ + K PD +
Sbjct: 307 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 366
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P T+N LI L +A ++++M +
Sbjct: 367 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 426
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+P+V TY +I C+IG + + +M+D+G P+K +++ LI+G G+ +
Sbjct: 427 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 486
Query: 484 GKVVS 488
+++S
Sbjct: 487 KELIS 491
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 188/410 (45%), Gaps = 14/410 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ V + T++ AL + + D F N
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF-NQM 458
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V P+ + N LI+ C + A ++ E+ + GM ++V ++I+ G +
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G PDA Y +LMDGY +G++ A++V D M G+EPN V YG +
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQR PS+ L +ID L E G+ A + +
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
D + ++ L K EA LF E ++ +++T NT+I GM ++ + EA
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 698
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + + P+V TY+++I K G +E + M + GC PN + ++ L
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 758
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS----DLDSGAGALDE 521
+ G +S + D NF L + + DL S G E
Sbjct: 759 KKNEIVRAGAYLS--------KIDERNFSLEHLTAMLLVDLFSSKGTCRE 800
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 11/265 (4%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ N + ++E FC+ K++ E
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC++GK A +L + + C P+
Sbjct: 168 A---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 224
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I KEG + +A LF E +RG P L+TYN+++ +C++ + +A MV
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
K V PN +TYN LI G+ G KE +R+ +EM P+ + S+L+ L + G
Sbjct: 285 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 344
Query: 482 EVGKVV-SMATASGSVESDSWNFLL 505
E V +MA + + S+N +L
Sbjct: 345 EARDVFDTMAMKGQNPDVFSYNIML 369
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F + NV+ ++ +LNT+++ + Q +R + +F S + ++VP+V T +I+I
Sbjct: 661 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFA-SISRSRLVPSVVTYSIMI 719
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
L K+ VE A + M + G PN ++ + + +I A I +R +
Sbjct: 720 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 779
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVM 278
+ T +L+D + G + ++ +
Sbjct: 780 LEHLTAMLLVDLFSSKGTCREQIRFL 805
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 204/371 (54%), Gaps = 14/371 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+ T+I+ + R A + F+ ++K + + TL+ L Q N L M
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288
Query: 173 KNS-RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
++ R+ K P + + +I+I LCK + A + EM + G++P+++++TT++ G+
Sbjct: 289 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G E AK +F ++LD G PD TT +VL+D K G++ +A K+++ + G P+ V
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T +++ C + +A L M + +P+ C ++ LC+ G ++ A EL K +
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468
Query: 352 LRK------NCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
L NC P NAIS S II LCK G+ EA++LF E + G IP +++Y +LI G
Sbjct: 469 LSDTSPYGINCKP-NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C S + +A L+++MV+ GV+P+V T+++LI CK G E +LE M+ +GC PN
Sbjct: 528 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 587
Query: 464 KTSFSLLIEGL 474
+++ L++GL
Sbjct: 588 TVTYTTLVKGL 598
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 232/496 (46%), Gaps = 60/496 (12%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQI----FHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P + L+ + + N++ ALQ+ + G++ +Y II L + R
Sbjct: 259 PDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 318
Query: 95 DAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
D L E+K P++ + T+I + L+G+ E A F + +Q V +
Sbjct: 319 DEARELFKEMKAQGIMPDVIS----YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ L++ L + + + + + + +P+V TC L+K LC K + A ++ +M
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQR-GCIPDVVTCTTLVKGLCMKHRISKATQLFLKM 433
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDI----------------------------------- 236
+G +PN+VT T++ G G+I
Sbjct: 434 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493
Query: 237 ------ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+ A+ +F ++ G +PD +YT L+ G+ + G+ DA + +EM D GV+P+
Sbjct: 494 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 553
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
T+ V+I+ CK K EA LL+ M+QR +P++ ++ LC ++ +A +L+ +
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEA-----KKLFDEFERGS--IPSLLTYNTLIAG 403
+ + C+PD T++ LC+ G I A K L D + G+ P +++Y+ +I G
Sbjct: 614 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C+ EA L+ +M GV PNV +Y LI GFC+ G ++ + EM+D+G N
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733
Query: 464 KTSFSLLIEGLYESGN 479
++S++I G + G
Sbjct: 734 AVTYSVMIHGFCKEGQ 749
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 203/402 (50%), Gaps = 16/402 (3%)
Query: 110 IKCGENLFITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
IKC L I GL R + A + F ++ + V S TL++ + +++
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+F N + P+V T ++LI LCKK V A ++L+ + G +P++VT TT++
Sbjct: 356 AKCLF-NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN--- 284
G + I A ++F + G +P+ T LM G + G + A+++ M +
Sbjct: 415 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 474
Query: 285 ---GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+PN ++Y ++I+ CK + EAR L +M +P +I C GK
Sbjct: 475 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 534
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTL 400
+DA L+ ++ PD S +I LCKEGK+ EA +L + +RG IP+ +TY TL
Sbjct: 535 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 594
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML-DKG 459
+ G+C + ++EA +L+ M + G P+V TY L++G C+ GN K + + ++ML D G
Sbjct: 595 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 654
Query: 460 CF-----PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ P+ S+S++I+GL + G E E ++ A G +
Sbjct: 655 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 696
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 198/370 (53%), Gaps = 12/370 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL-VHL----M 171
+ T+I+ + R A + F+ ++K + + TL+ L Q + ++ +HL +
Sbjct: 48 YSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 107
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
S++ K P + + +I+I LCK + A + EM + GM+P+++++T+++ G+
Sbjct: 108 NDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC 167
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G E AK +F ++LD G D TT ++L+D K G++ +A ++++ M G + V
Sbjct: 168 RSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV 227
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +I+ C + EA L M + P + ++ LC+ G + A +L + +
Sbjct: 228 TYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287
Query: 352 LRKN------CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGM 404
L C P S II LCK+ + EA++LF E + +G +P +++Y TLI G
Sbjct: 288 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGF 347
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C S + +A L+++M++ G++P+V T ++LI CK G E ++LE ++ +GC P+
Sbjct: 348 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDV 407
Query: 465 TSFSLLIEGL 474
+ + L++GL
Sbjct: 408 VTCTTLVKGL 417
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 168/327 (51%), Gaps = 13/327 (3%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+V T +LI CK+ V A +L+ M G + ++VT++T++ G + I A
Sbjct: 6 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE------PNEVTYG 294
++F + G PDA Y LM G + G++ A+ + EM ++ + P V+Y
Sbjct: 66 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I+ CK ++ EAR L +M + +P +I C GK E A L+ +L
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEA 413
D SS +I LCKEGK+ EA +L + +RG I ++TY+TLI G+C ++EA
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML-DKG-----CFPNKTSF 467
RL+ M + G P+ Y L++G C+ GN +++ +EML D G C P S+
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
S++I+GL + E E ++ A G
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQG 332
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 228/487 (46%), Gaps = 68/487 (13%)
Query: 65 HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVI 121
Y K P +Y II L + R D L E+K P++ + ++I
Sbjct: 112 QYGIKCKPTLV----SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVIS----YTSLI 163
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRH 177
+ +G+ E A F + ++ V + + L++ L + + +L+ +M +
Sbjct: 164 HGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG-- 221
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ ++ T + LIK LC K + A R+ M +G P+ + + T++ G G+I
Sbjct: 222 ---CILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNIN 278
Query: 238 NAKRVFGDIL-DRGWV-----PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
A ++ ++L D G P +Y++++DG K R +A ++ EM+ G+ P+ +
Sbjct: 279 TALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVI 338
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+Y +I FC K +A+ L ++ML P +ID+LC++GKV +A +L + +
Sbjct: 339 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 398
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAEL 410
+++ C+PD +T++ LC + +I +A +LF + ++ G +P+++T TL+ G+C+S +
Sbjct: 399 IQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 458
Query: 411 T-----------------------------------------EAGRLWDDMVEKGVEPNV 429
EA L+ +M GV P+V
Sbjct: 459 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDV 518
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+Y LI GFC+ G K+ + EM+D G P+ T+FS+LI+ L + G E +++ +
Sbjct: 519 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 578
Query: 490 ATASGSV 496
G +
Sbjct: 579 MIQRGCI 585
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 115/219 (52%), Gaps = 7/219 (3%)
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G++P+ T GV+I+ FCK K EA LL+ M+QR + +I LC + ++ +A
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-------PSLLTY 397
+L+ + + C PD T++ LC+ GKI A L E + P+L++Y
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+ +I G+C+ EA L+ +M +G+ P+V +Y LI GFC+ G ++ + EMLD
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G + T+ S+LI+ L + G E +++ + G +
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 217/471 (46%), Gaps = 82/471 (17%)
Query: 47 LVSMIFRQQNLDLALQIF--HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+S R++ A +F H G P+ TY ++I+ +AR F LL E+
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSI----TYSTLINGFCKARDFQQAYRLLDEM 59
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
++ + P AV NT++ L N R
Sbjct: 60 EKRGIV-------------------PHNAV-----------------YNTIIKGLCDNGR 83
Query: 165 YDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D + +++ RH P+V T IL+ ALCK + A +L++M G PN+VT+
Sbjct: 84 VDSALVHYRDMQRH---CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTY 140
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T++ G+ G+++ A +F +L+ PD TY +L+DGY K R D K++ EM
Sbjct: 141 NTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK 200
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G EPN +TY ++++ K K +A NL ML+R PS +ID+ C+ G+++
Sbjct: 201 YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDL 260
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN---- 398
A EL++ + + C+PD + +I C+ +I +A++L + E G P ++TYN
Sbjct: 261 AYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVS 320
Query: 399 -------------------------------TLIAGMCESAELTEAGRLWDDMVEKGVEP 427
TLI G+C+S L +A +L +M G P
Sbjct: 321 GLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 380
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+V Y +LI GFCK + + EMLDKGC P ++S++I+ L +S
Sbjct: 381 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 198/413 (47%), Gaps = 39/413 (9%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N LL+A V+ K+ + +FKN P+ T + LI CK D + A R+LDEM
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGL-CSPDSITYSTLINGFCKARDFQQAYRLLDEME 60
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIE----------------------------------N 238
G+VP+ + TI+ G G ++ +
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISD 120
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + D+++ G P+ TY L++G+ KLG + +AV + ++M +N P+ TY ++I+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK ++ + LL +M++ P+ ++D L + GK DA L + +LR++C P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ + +I CK G++ A +LF +RG +P + TYN +I+G C + + +A +L
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ M E G P+V TYN ++ G CK E + E + + G F + + S LI+GL +S
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360
Query: 478 GNEGEVGKVVSMATASGSV-ESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
+ K++ +GS + ++ L+ LD E+L K C
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 413
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 39/314 (12%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N TY+++I+ + D L ++ +N C ++F +I Y RP+
Sbjct: 136 NVVTYNTLINGFCKLGNMDEAVVLFNQMLEN---SCSPDVFTYNILIDGYCKQERPQDGA 192
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMF----KNSRHKFKV----- 181
K + K+ + + + NTL+++LV++ +Y +L +M K S F +
Sbjct: 193 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 252
Query: 182 ---------------------VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+P+++T NI+I C+ + ++ A ++L+ M G P++
Sbjct: 253 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 312
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ +I+ G ++ A V+ + + G+ D T + L+DG K RL DA K++ E
Sbjct: 313 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 372
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
ME NG P+ V Y ++I FCK + ++ +ML + VP+ VID LC+ +
Sbjct: 373 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 432
Query: 341 VEDACELWKRLLRK 354
V D C L K +L +
Sbjct: 433 VRDGCMLLKTMLER 446
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 215/419 (51%), Gaps = 14/419 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLAGRPE 131
F+HN +Y +I L R+R +A + + E K +K G+ F ++IR+YG AG +
Sbjct: 123 FTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQ 182
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
++K F +++ V SV + N+LL+ +++ R + +F + V P+ +T NIL
Sbjct: 183 ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNIL 242
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG- 250
I+ C V+ EM P++VT+ T++ G G ++ A V ++ +
Sbjct: 243 IRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP 302
Query: 251 -WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
P+ TYT L+ GY + +A+ ++ EM G++PN++TY +I+ C+ +K +
Sbjct: 303 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362
Query: 310 RNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
+ +L+ M+ ++P + +I C GK+E+A +++++ PD+A S ++
Sbjct: 363 KEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVR 422
Query: 369 WLCKEGKIWEAKKLFDEFERGSI--------PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
LC+ G A++ FDE I P + YN + +C + + +A R++ +
Sbjct: 423 SLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 482
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+++G + + +Y LI G C+ G + G +L ML + P+ ++ L+I+GL + G+
Sbjct: 483 MKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGD 540
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 177/396 (44%), Gaps = 51/396 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY++++ L RA +++ + K++P + + T+IR Y + A+
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLA 332
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ ++ + + NTL+ L + ++ D + + + +P+ T N LIKA C
Sbjct: 333 EMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTM 392
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI---------------------- 236
+E A V ++M + + P+ T++ ++ RGD
Sbjct: 393 GKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGC 452
Query: 237 --------------------ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+ A+RVF ++ RG D +Y L+ G+ + G
Sbjct: 453 KPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFD 511
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
++ M P+ TYG+MI+ K A L+ ML+ ++P++A+ ++ L
Sbjct: 512 LLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALV 571
Query: 337 EEGKVEDACELWK----RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK--LFDEFERGS 390
E+G ++ L K R +R+N ++ +LC+ K+ EA+K LF +R S
Sbjct: 572 EKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQS 631
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ + +T+I+G+C++ +++EA L+ ++VEKG++
Sbjct: 632 V-DIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQ 666
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ Y G +++KV M++ GV P+ VT+ ++ K ++ A+ L D+ML
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
V PD + +I C +
Sbjct: 228 DTYGV----------------------------------TPDTYTFNILIRGFCMNSMVD 253
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNM 434
E F E R P ++TYNTL+ G+C + ++ A + MV+K + PNV TY
Sbjct: 254 EGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTT 313
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI+G+C + E + +L EM+ +G PNK +++ LI+GL E+ ++ +++ G
Sbjct: 314 LIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 373
Query: 495 SVESDS 500
D+
Sbjct: 374 GFIPDT 379
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 232/430 (53%), Gaps = 8/430 (1%)
Query: 48 VSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN 107
+ +I +++ AL IF+ + F+HN+ TY SII LA+ + F A++ +L ++ +
Sbjct: 54 IKLIKNERDPQHALDIFNMVSE-QQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYD 112
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR-SVRSLNTLLNALVQNKRYD 166
K E +F+ +++++ + E + F I+ ++ S+++++T LN LV++ R D
Sbjct: 113 T-CKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVD 171
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM-VPNLVTHTT 225
L + N+R K + PN NIL+K C+ D++ A V+ EM S + PNLVT++T
Sbjct: 172 LARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYST 231
Query: 226 ILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++GG G ++ A F +++ + +PDA TY +L++G+ + G++ A +++ M+ N
Sbjct: 232 LIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSN 291
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G PN Y V++ +CK + EA+ + +++ P + +I+ LC G+V++A
Sbjct: 292 GCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEA 351
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIA 402
EL +++ K+C D + ++ LC+EG+ EA + + FE G + +Y ++
Sbjct: 352 TELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFE-GFYLNKGSYRIVLN 410
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ + EL +A L M+ +G P+ T N L+ C G K+ + L +L+ G P
Sbjct: 411 FLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKP 470
Query: 463 NKTSFSLLIE 472
S+ L++
Sbjct: 471 EHESWFTLVD 480
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 151/299 (50%), Gaps = 8/299 (2%)
Query: 206 RVLDEMPSMGMV----PNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTV 260
RVLD ++ + P+L +T L V ++ A+++ + + P+ + +
Sbjct: 136 RVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNI 195
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ + + G L A +V+ EM+ V PN VTY +I C+ K EA ++M+ +
Sbjct: 196 LVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSK 255
Query: 320 KYVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ AL + I+ C+ GKV+ A + + + C P+ S +++ CKEG++ E
Sbjct: 256 DNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQE 315
Query: 379 AKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AK++F+E + G P ++Y TLI +C + + EA L M +K + T+N+++
Sbjct: 316 AKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLG 375
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G C+ G E + +++++ +G + NK S+ +++ L + G + +++ + G V
Sbjct: 376 GLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFV 434
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 147/333 (44%), Gaps = 36/333 (10%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
L + D LL + ++ +F +++++ G + A + ++ V
Sbjct: 164 LVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSY 223
Query: 148 -SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
++ + +TL+ L +N + F+ K ++P+ T NILI C++ V+ A
Sbjct: 224 PNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRART 283
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+L+ M S G PN+ ++ ++ GY G ++ AK VF +I G PD +YT L++
Sbjct: 284 ILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLC 343
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN--------------- 311
+ GR+ +A +++ +M+D + VT+ VM+ C+ + EA +
Sbjct: 344 RTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKG 403
Query: 312 --------------------LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
LL ML R +VP A ++ LLC G V+DA E L
Sbjct: 404 SYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGL 463
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
L P++ T++ +C+E K+ +L D
Sbjct: 464 LEMGFKPEHESWFTLVDLICRERKMLPVFELLD 496
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF-ITVIRN-YGLAGRPELAVKTF 137
TY+ +I+ + D ++L +K N C N+F +V+ N Y GR + A + F
Sbjct: 264 TYNILINGFCQRGKVDRARTILEFMKSNG---CSPNVFNYSVLMNGYCKEGRLQEAKEVF 320
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
I+ ++ S TL+N L + R D + + + K + T N+++ LC+
Sbjct: 321 NEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDK-DCRADTVTFNVMLGGLCR 379
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A+ ++ ++P G N ++ +L +G++ A + G +L+RG+VP T
Sbjct: 380 EGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHAT 439
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ G + DAV+ + + + G +P ++ +++ C+ +K LLD ++
Sbjct: 440 SNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLV 499
Query: 318 QRKYV 322
++Y+
Sbjct: 500 TQEYL 504
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 216/411 (52%), Gaps = 9/411 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T + ++H + F V+++++E+++ P++ + R AG E A
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR----AGDVEAA 213
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + ++ + + N++L L++N R+D +F+ + V P+V + N+LI
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR-AMDACGVAPDVRSFNMLIG 272
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ ++E A+R EM + P++V+ + ++G + RG++++A ++ + G +P
Sbjct: 273 GFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMP 332
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D YT+++ G+ + G + +A++V DEM G P+ VTY ++ CK ++ +A LL
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++M +R P +I C +G +E A + + + + PD +T+I +C++
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + +A +L+D+ R P+ +TY+ LI CE ++ A D+MV KG+ PN+ TY
Sbjct: 453 GDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTY 512
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
N +I+G+C+ GN +G + L +M P+ +++ LI G + G E
Sbjct: 513 NSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 211/418 (50%), Gaps = 4/418 (0%)
Query: 89 ARARAFDAVESL-LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
AR RA D ++ L + + IK G + +V++ GR + A + F ++ V
Sbjct: 203 ARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAP 262
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
VRS N L+ + + +K R + +V P+V + + LI ++ +++ A
Sbjct: 263 DVRSFNMLIGGFCRAGELEEALRFYKEMRGR-RVTPDVVSFSCLIGLFTRRGEMDHAAEY 321
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L EM G++P+ V +T ++GG+ G + A RV +++ G +PD TY L++G K
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
RL+DA ++++EM++ GV P+ T+ +I +C+ +A D + ++ P
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF- 386
+ID +C +G + A ELW + + P++ S +I C++G++ A DE
Sbjct: 442 YNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G +P+++TYN++I G C S +++ + M V P++ TYN LI G+ K G
Sbjct: 502 NKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMH 561
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
E +L+ M ++ P+ +++++I G GN E V A G +E D + ++
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARG-IEPDRYTYM 618
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 202/404 (50%), Gaps = 9/404 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S++ L R +D + + P+++ F +I + AG E A++
Sbjct: 231 TYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS----FNMLIGGFCRAGELEEALRF 286
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + V V S + L+ + D + R +F ++P+ ++I C
Sbjct: 287 YKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR-EFGLMPDGVIYTMVIGGFC 345
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A+RV DEM + G +P++VT+ T+L G + +A+ + ++ +RG PD
Sbjct: 346 RAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLC 405
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ GY + G + A++ D + D + P+ VTY +I+ C+ G+A L DDM
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R+ P+ +ID CE+G+V++A ++ K +P+ ++II C+ G +
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ ++ + + P L+TYNTLI G + ++ EA L M + V+P+ TYNM+
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMI 585
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I GF GN +E + ++M +G P++ ++ +I G +GN
Sbjct: 586 ISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGN 629
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 152/286 (53%), Gaps = 1/286 (0%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F +P+V T N L+ LCK+ + A +L+EM G+ P+L T TT++ GY G+IE
Sbjct: 363 FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEK 422
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + F I D+ PD TY L+DG + G L A ++ D+M + PN VTY ++I+
Sbjct: 423 ALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ C+ + A LD+M+ + VP+ +I C G V + ++ MP
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D +T+IH KEGK+ EA L E ++ P +TYN +I+G + EA ++
Sbjct: 543 DLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVY 602
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
M +G+EP+ +TY +I G GN+K+ ++ +EML KG P+
Sbjct: 603 KKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 160/304 (52%), Gaps = 1/304 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N +T NI++ + CK V+ EM + P++VTH ++ GD+E A +
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ +G P TY ++ G ++ GR A +V M+ GV P+ ++ ++I FC+
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ EA +M R+ P +I L G+++ A E + + MPD I
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I C+ G + EA ++ DE G +P ++TYNTL+ G+C+ L++A L ++M E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+GV P++ T+ LI G+C+ GN ++ ++ + + D+ P+ +++ LI+G+ G+ G+
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457
Query: 483 VGKV 486
++
Sbjct: 458 ANEL 461
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 6/283 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAVKTF 137
TY+++++ L + R E LL E+K+ P C F T+I Y G E A++ F
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLC---TFTTLIHGYCRDGNIEKALQFF 427
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
I ++ + + NTL++ + + + ++ + H ++ PN T +ILI + C+
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELW-DDMHSREIFPNHVTYSILIDSHCE 486
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
K V+ A LDEM + G+VPN++T+ +I+ GY G++ ++ + +PD T
Sbjct: 487 KGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLIT 546
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L+ GY+K G++ +A ++ ME+ V+P+ VTY ++I F EA + M
Sbjct: 547 YNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMG 606
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
R P +I+ G + + +L +L+K PD+
Sbjct: 607 ARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
T N ++ C++ + E + +M ++ V P+V T+N+++ + G+ + + +++ M
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDS 514
+ KG P +++ +++GL +G + +V A G + + S+N L+
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCR---- 276
Query: 515 GAGALDELL 523
AG L+E L
Sbjct: 277 -AGELEEAL 284
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 215/419 (51%), Gaps = 14/419 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLAGRPE 131
F+HN +Y +I L R+R +A + + E K +K G+ F ++IR+YG AG +
Sbjct: 123 FTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQ 182
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
++K F +++ V SV + N+LL+ +++ R + +F + V P+ +T NIL
Sbjct: 183 ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNIL 242
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG- 250
I+ C V+ EM P++VT+ T++ G G ++ A V ++ +
Sbjct: 243 IRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP 302
Query: 251 -WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
P+ TYT L+ GY + +A+ ++ EM G++PN++TY +I+ C+ +K +
Sbjct: 303 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362
Query: 310 RNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
+ +L+ M+ ++P + +I C GK+E+A +++++ PD+A S ++
Sbjct: 363 KEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVR 422
Query: 369 WLCKEGKIWEAKKLFDEFERGSI--------PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
LC+ G A++ FDE I P + YN + +C + + +A R++ +
Sbjct: 423 SLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 482
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+++G + + +Y LI G C+ G + G +L ML + P+ ++ L+I+GL + G+
Sbjct: 483 MKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGD 540
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 179/426 (42%), Gaps = 52/426 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY++++ L RA +++ + K++P + + T+IR Y + A+
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLA 332
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ ++ + + NTL+ L + ++ D + + + +P+ T N LIKA C
Sbjct: 333 EMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTM 392
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI---------------------- 236
+E A V ++M + + P+ T++ ++ RGD
Sbjct: 393 GKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGC 452
Query: 237 --------------------ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+ A+RVF ++ RG D +Y L+ G+ + G
Sbjct: 453 KPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFD 511
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
++ M P+ TYG+MI+ K A L+ ML+ ++P++A+ ++ L
Sbjct: 512 LLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALV 571
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG---KIWEAKKLFDEFERGSIPS 393
E+G ++ L K +L + + +S+ + L K G K + L +E G
Sbjct: 572 EKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLL--YENGY--- 626
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
L+ L++ +C+S +L EA ++ +EK ++ + +I G CK E +
Sbjct: 627 LVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYY 686
Query: 454 EMLDKG 459
E+++KG
Sbjct: 687 ELVEKG 692
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 171/365 (46%), Gaps = 27/365 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-------TVIRNYGLAGR 129
N TY+++I L A+ D ++ +L E G+ FI T+I+ + G+
Sbjct: 342 NKITYNTLIQGLCEAQKLDKIKEIL-------EGMVGDGGFIPDTCTLNTLIKAHCTMGK 394
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR------HKFKVVP 183
E A F ++ + VQ + + L+ +L Q + F H P
Sbjct: 395 LEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKP 454
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
V N + + LC + A RV ++ G + ++ T++ G+ G E +
Sbjct: 455 LVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLL 513
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+L R +VPDA TY +++DG +K G A K +++M + P + ++ A +
Sbjct: 514 VLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 573
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ E+ +L+ ML+R+ + L + LL + G ++D + LL +N
Sbjct: 574 GCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSG-LQDKAFMTIGLLYENGYLVKM-- 630
Query: 364 STIIHWLCKEGKIWEAKK--LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++ +LC+ K+ EA+K LF +R S+ + +T+I+G+C++ +++EA L+ ++V
Sbjct: 631 EELVSFLCQSRKLLEAQKMLLFSLEKRQSV-DIDMCSTVISGLCKAHKVSEAFALYYELV 689
Query: 422 EKGVE 426
EKG++
Sbjct: 690 EKGMQ 694
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ Y G +++KV M++ GV P+ VT+ ++ K ++ A+ L D+ML
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
V PD + +I C +
Sbjct: 228 DTYGV----------------------------------TPDTYTFNILIRGFCMNSMVD 253
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNM 434
E F E R P ++TYNTL+ G+C + ++ A + MV+K + PNV TY
Sbjct: 254 EGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTT 313
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI+G+C + E + +L EM+ +G PNK +++ LI+GL E+ ++ +++ G
Sbjct: 314 LIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 373
Query: 495 SVESDS 500
D+
Sbjct: 374 GFIPDT 379
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 217/460 (47%), Gaps = 53/460 (11%)
Query: 20 GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD 79
GGA CS + + I + F++ +++ A +F ++
Sbjct: 211 GGAVCSPDVVAYSTVIDGF-------------FKEGDVNKACDLFKEM--VQRGIPPDFV 255
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++H L +ARA D E+ L ++ N + + +I Y G+ + AV+ F
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQM-VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ RH ++P+V T ++L+ +LCK
Sbjct: 315 MR----------------------------------RHS--ILPDVVTLSMLMGSLCKYG 338
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G PN+ ++T +L GY +G + + +F +L G PD T+
Sbjct: 339 KIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFN 398
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+P+ VTY +I A C+ K +A + M+ +
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I C G + A EL ++ D S+II+ LCK G++ +A
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P+ + Y+ L+ G C ++ +A R++D MV G+EPN Y L+ G
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CKIG EG+ + EML KG P+ ++++I+GL+E+G
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 184/365 (50%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ ++ N LL + KR D + + + VP+VF
Sbjct: 124 AHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF 183
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ +IL+K+LC + A +L M G V P++V ++T++ G+ GD+ A +F
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFK 243
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY+ ++ K + A + +M + GV PN TY +I +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M + +P ++ LC+ GK+++A +++ + K P+ +
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYT 363
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P + T+N LI L +A ++++M +
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+P+V TY +I C+IG + + +M+D+G P+K ++ LI+G G+ +
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 484 GKVVS 488
+++S
Sbjct: 484 KELIS 488
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 191/410 (46%), Gaps = 14/410 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ V + T++ AL + + D F N
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF-NQM 455
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V P+ + + LI+ C + A ++ E+ + GM ++V ++I+ G +
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G P A Y++LMDGY +G++ A++V D M G+EPN+V YG +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQ+ PS+ L +ID L E G+ A + +
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
+ + ++ L K EA LF E ++ +++T NT+IAGM ++ + EA
Sbjct: 636 AMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKD 695
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + G+ P V TY+++I K G +E + M + GC P+ + ++ L
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 755
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNF----LLTRIVSDLDSGAGALDE 521
+ G +S + D NF L T ++ DL S G E
Sbjct: 756 KKNEIVRAGAYLS--------KIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ N + +++ FC+ K++ E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC++GK A +L + + C PD
Sbjct: 165 A---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
ST+I KEG + +A LF E +RG P +TY++++ +C++ + +A MV
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KGV PN +TYN LI G+ G KE +R+ +EM P+ + S+L+ L + G
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341
Query: 482 EVGKVVSMATASG 494
E V G
Sbjct: 342 EARDVFDTMAMKG 354
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 14/274 (5%)
Query: 70 FHPN---FSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
HP +S D Y ++ K+ +A R FDA+ S I+ + ++ T++ Y
Sbjct: 530 LHPTAVVYSMLMDGY-CLVGKMEKALRVFDAMVS--------AGIEPNDVVYGTLVNGYC 580
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
GR + + F + + ++ S N +++ L + R + F + N
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-GIAMNK 639
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T NI+++ L K + AI + E+ +M + N++T T++ G +E AK +F
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFAS 699
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
I G VP TY++++ IK G + +A + M++ G EP+ ++ K +
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
A L + +R + ++DL +G
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 392 PSLLTYNTLIAGMCESAELTE-AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+ TY L+ C A E A + ++ G+ N+ N L++GFC+ E +
Sbjct: 109 PTSHTYAILM-DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167
Query: 451 IL-EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
IL + GC P+ S+S+L++ L + G G+ ++ M G+V S
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 216
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 250/557 (44%), Gaps = 80/557 (14%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P ++ L P + S+ + AL F++ P F HN +Y S+++ L RAR
Sbjct: 57 PSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIA-LRPGFKHNVHSYSSMLNILIRAR 115
Query: 93 AFDAVESL-LTELKQNPEIKCGENLFI-TVIRNYGLAG----RPEL--------AVKTFL 138
E + ++ +K I+ + LF+ V R G +P L ++ FL
Sbjct: 116 LLGVAEKIRISMIKSCCSIE--DVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFL 173
Query: 139 RIEKF----------NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-----P 183
I++ + ++ + N ++N Y + + + + K+V P
Sbjct: 174 LIDEMKTVYLELLNNQISPNIYTFNAMVNG------YCKIGNVVEAELYASKIVQAGLHP 227
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ FT LI C+ V+ A V MP G N V++T ++ G G I A ++F
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
D+ + P TYTVL+ GR +A+ + +EM++ G EPN TY V+I+ CK
Sbjct: 288 ADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE 347
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K EAR +L +M ++ +PS +ID C+EG ++DA E+ + +C P+
Sbjct: 348 NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407
Query: 364 STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAG------------------- 403
+ +I LCK+ K+ +A L ++ ER PSL+TYN+LI G
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 404 ----------------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+C+ + EAG L+D + KGV+ N Y LI G+CK+G
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLLT 506
+LE ML+ C PN ++++LIEGL + E +V+ M T ++ L+
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587
Query: 507 RIVSDLDSGAGALDELL 523
++ D GA D L
Sbjct: 588 EMLKD-----GAFDHAL 599
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 205/433 (47%), Gaps = 9/433 (2%)
Query: 66 YAGKFHPNFSHNYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
Y + S N T++++++ K+ + S + + +P+ +L + R
Sbjct: 182 YLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR 241
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
N G+ A + FL + + QR+ S L++ L + R + +F +
Sbjct: 242 NKGVDN----AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-NCC 296
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P V T +LI AL A+ + +EM G PN+ T+T ++ G ++ A+++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ ++G +P TY L+DGY K G + DA +++D ME N PN TY +I CK
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K +A LL+ ML+RK PS +I C+ +E A L + +PD
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S I LCKEG++ EA LFD + +G + + Y LI G C+ ++ A L + M+
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
PN +TYN+LI+G CK KE ++ +ML G P ++++LI + + G
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 482 EVGKVVSMATASG 494
KV + + G
Sbjct: 597 HALKVFNHMVSLG 609
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 209/428 (48%), Gaps = 21/428 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+IH + ++ LL+ + +N + + + I GR E A F
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVP-DQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ V+ + L++ + + D+ + + + + +PN +T N+LI+ LCK+
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND-ACLPNSYTYNVLIEGLCKEK 558
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A ++ +M +MG+ P +VT+T ++G + G ++A +VF ++ G+ PD TYT
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+ Y G L + V+ +M + G+ P+ VTY V+I+ + + + A + L M+
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
PS + +I L E ++++ ++ + +++S+T+ + + A
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKET---------RSEIGIDSVSNTLEYEI--------A 721
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KLF++ E G + Y LIAG C+ L EA L M E+G+ P+ YN L+
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY-ESGNEGEVGKVVSMATASGSVE 497
CK+G E +R+++ M++ G P S+ LL+ GLY E NE + + + +
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841
Query: 498 SDSWNFLL 505
+W L+
Sbjct: 842 EVAWKVLI 849
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 199/451 (44%), Gaps = 26/451 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I L + D +L+E+ + I + +I Y G + A +
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT-YNALIDGYCKEGMIDDAFEI 391
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKA 194
+E + + R+ N L+ L + ++ VH + N + K+ P++ T N LI
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRK---VHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK +D+E A R+L M G+VP+ T++ + G +E A +F + +G +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
YT L+DGY K+G++ A +++ M ++ PN TY V+IE CK KK EA +L+
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
ML P+ +I + ++G + A +++ ++ PD + +H +G
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ E + + E G +P L+TY LI G A MV+ G +P+++ +
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688
Query: 434 MLIQGFCKIGNAKE------------------GIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+LI+ KE +++ E+M++ GC + + + LI G
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFC 748
Query: 476 ESGN-EGEVGKVVSMATASGSVESDSWNFLL 505
+ E G V M S D +N LL
Sbjct: 749 QQERLEEAQGLVHHMKERGMSPSEDIYNSLL 779
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVF 186
E+A+K F ++ + V L+ Q +R + LVH M + + P+
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG-----MSPSED 773
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N L+ CK A+R++D M G++P L ++ ++ G G E AK VF +
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
L G+ D + VL+DG +K + + +++D ME+ G +PN +TY ++IE
Sbjct: 834 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 221/441 (50%), Gaps = 22/441 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S +++++ LD AL I H + H N TY+S+I L + D + L +K
Sbjct: 85 LLSGLWKEKRLDQALAILHEM-RDH-GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS 142
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRS----------VRSLNT 154
++C ++ + T++ G+ E A+ F ++ +RS V + +
Sbjct: 143 ---VECSPSMVTYNTLLDGLFRTGKLERAMALF---QEMLDRRSHDMDDRCSPNVITYSV 196
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L++ L + R + ++ + + P+V T IL+ LCK+ V A VL EM
Sbjct: 197 LIDGLCKANRVSQAVELLESMKAR-GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 255
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G VPNLVT+ ++L G + +A + D+ RG P+ TY L+DG K+GR+ DA
Sbjct: 256 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 315
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ +M D G P+ + Y ++I CK + E+ LL + P VI
Sbjct: 316 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 375
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
LC ++++AC L + + C PD + ST+I LCK GK+ EA L++ G
Sbjct: 376 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDAD 435
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TY+TLI G+C++ + EA L MV G P+ TYN LI+G C + + E I ++E
Sbjct: 436 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 495
Query: 454 EMLDKGCFPNKTSFSLLIEGL 474
EM C P+ ++++LI G+
Sbjct: 496 EMERSNCAPSAVTYNILIHGM 516
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 209/425 (49%), Gaps = 14/425 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
TY +++ R D + E++ + N+F+ I GL A R A++ F
Sbjct: 11 TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVP---NVFLCSILIDGLCKAKRSIDALRCF 67
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + LL+ L + KR D + R PNV T N LI LCK
Sbjct: 68 RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMR-DHGCEPNVVTYNSLIDGLCK 126
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG------- 250
++ + A + + M S+ P++VT+ T+L G G +E A +F ++LDR
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TY+VL+DG K R++ AV++++ M+ G P+ +TY ++++ CK K A
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L +ML VP+ ++ LC +V DA L + + + C P+ T+I L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Query: 371 CKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK G++ +A L D ++G P L+ YN LI G+C++ ++ E+ L V G++P+V
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TY+ +I G C+ E R+L + +GC P+ +S LI+GL ++G E + +
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426
Query: 490 ATASG 494
G
Sbjct: 427 MAGDG 431
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 226/436 (51%), Gaps = 15/436 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y +++ L + + D ++L E++ + P + +L + +N P+ A + F
Sbjct: 82 YTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN----NEPDRAQELF 137
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKF--KVVPNVFTCNIL 191
++ S+ + NTLL+ L + + + L M H + PNV T ++L
Sbjct: 138 EHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVL 197
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LCK + V A+ +L+ M + G P+++T+T ++ G + A V ++LD G
Sbjct: 198 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 257
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VP+ TY L+ G + R++DA+ +M +M G PN VTYG +I+ CK + +A
Sbjct: 258 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 317
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+L DM+ + P + +I+ LC+ +V+++ L +R + PD S++I+ LC
Sbjct: 318 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 377
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ ++ EA +L + RG P ++ Y+TLI G+C++ ++ EA L++ M G + +V
Sbjct: 378 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVV 437
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SM 489
TY+ LI G CK G E +L M+ G P+ +++ LI+GL + + E ++V M
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497
Query: 490 ATASGSVESDSWNFLL 505
++ + + ++N L+
Sbjct: 498 ERSNCAPSAVTYNILI 513
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 178/366 (48%), Gaps = 10/366 (2%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
Q V + LL + D F R K +VPNVF C+ILI LCK A+
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSK-NLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
R M G+V + V +T +L G ++ A + ++ D G P+ TY L+DG
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K A ++ + M+ P+ VTY +++ + K A L +ML R+
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 326 ALCCK-------VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
C +ID LC+ +V A EL + + + C PD + ++ LCKE K+
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A ++ E + G +P+L+TYN+L+ G+C + +++A L DM +G PNV TY LI
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G CK+G K+ +L +M+DKG P+ +++LI GL ++ E ++ A SG ++
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIK 363
Query: 498 SDSWNF 503
D +
Sbjct: 364 PDVVTY 369
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 187/391 (47%), Gaps = 46/391 (11%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+S++H L RAR +L+ ++ C N+ YG
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCR---GCTPNVV-----TYG----------- 300
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
TL++ L + R M + K P++ N+LI LC
Sbjct: 301 -----------------TLIDGLCKVGRVKDACAMLADMIDKGGT-PDLMIYNMLINGLC 342
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K D V+ +I +L S G+ P++VT+++++ G ++ A R+ + RG PD
Sbjct: 343 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 402
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y+ L+DG K G++ +A + + M +G + + VTY +I+ CK + EA LL M
Sbjct: 403 LYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 462
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ PS+ +I LC+ +++A EL + + R NC P + +IH +C+ ++
Sbjct: 463 VRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERV 522
Query: 377 WEAKKLFDEFER------GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
A L ++ + G+ + Y++LI G+C++ + EA + +M++ GV P+
Sbjct: 523 DSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHI 582
Query: 431 TYNMLIQGFCKIGNAKEGIR--ILEEMLDKG 459
TY++L++G K + E +R +L++M+ G
Sbjct: 583 TYSILLEGLKKSKDLHE-LRHLVLDQMVQLG 612
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C PD + ++ C+ G+I +A++ FDE + +P++ + LI G+C++ +A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
R + M G+ + Y L+ G K + + IL EM D GC PN +++ LI+GL
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 220/453 (48%), Gaps = 47/453 (10%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESL--LTELKQNPEIKCGENLFITVIR 122
Y H S N T+ +I +A +A A+E L L E P++ +F +I
Sbjct: 50 YKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVY----IFNVLIH 105
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD---------------- 166
G P+ AVK F +E V+ + + NT+++ L ++ +
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKS 165
Query: 167 ---------LVHLMFKNSR--------HKFKVV---PNVFTCNILIKALCKKDDVEGAIR 206
L++ ++ SR K K P+V TCNIL+ +CK DVE A+
Sbjct: 166 APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALE 225
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+LD M G VP+++T+ +I+ G + A + + PD T+ L+DG+
Sbjct: 226 ILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFC 282
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K G L A++V++EM + P+ +TY +++ C+ + A LL++++++ Y+P
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
++D LC+ G++E+A +L K + + C + S+++ C+ G + +A+++ E
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+P L TYN ++ G+ + +++A L D+V +G P+V TYN LI G CK
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+E + +EM +GCFPN + ++ GL G
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVG 495
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 222/449 (49%), Gaps = 13/449 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R DLA+Q F +AG+ + H+ +Y+ ++ L ++ + +L + C
Sbjct: 3 RSSRPDLAIQFFDWAGE-QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHS---GC 58
Query: 113 GENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
NL F +IR AG+ A++ +++F+V V N L++ L ++ D
Sbjct: 59 SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK 118
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG--MVPNLVTHTTILG 228
+F+N +V P + T N +I LCK ++E A +L+EM G P++VT+ T++
Sbjct: 119 LFENMESS-RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLIN 177
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
+ I A + G PD T +L+ G K G + +A++++D M+ G P
Sbjct: 178 AFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP 237
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ +TY +I A C K EA +L M P ++D C+ G + A E+
Sbjct: 238 DVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVL 294
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
+ + R+N +PD + +++ LC+ G++ A L +E R G IP ++ Y +L+ G+C+S
Sbjct: 295 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 354
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
E+ EA +L +M +G V Y+ L+ G+C+ GN + IL EM+ P ++
Sbjct: 355 GEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTY 414
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASGSV 496
++++ GL + G+ + ++S A G V
Sbjct: 415 NIVLGGLIKDGSISKAVSLISDLVARGYV 443
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 154/294 (52%), Gaps = 1/294 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+V T IL+ LC+ V+ A +L+E+ G +P+++ +T+++ G G+IE A
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAH 361
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ ++ RG Y+ L+ GY + G + A +++ EM + P TY +++
Sbjct: 362 KLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGL 421
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K +A +L+ D++ R YVP +ID LC+ +V +AC+L + + C P++
Sbjct: 422 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPND 481
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++ LC+ G++ +A L E R P+++ Y +LI G+C+S + +A + D
Sbjct: 482 VTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDA 541
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
M +GV + F Y LI G E + + +EM+ +G P+ ++ L E
Sbjct: 542 MRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 50/423 (11%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L LVS I + +++ AL+I P + TY+SIIH L A
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGP--VPDVITYNSIIHALCVAGKVVEAA 259
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+L + +P++ F T++ + AG A++ + + N+ V + L+N
Sbjct: 260 EILKTMSCSPDLVT----FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315
Query: 159 LVQNKRYDLV-HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR----------- 206
L + + + +L+ + R + +P+V L+ LCK ++E A +
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGY--IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCR 373
Query: 207 ------------------------VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
+L EM S+ MVP L T+ +LGG + G I A +
Sbjct: 374 TGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 433
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
D++ RG+VPD TY L+DG K R+ +A + DEM G PN+VT G ++ C+
Sbjct: 434 ISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCR 493
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A +L+ +M ++++ P+ + +ID LC+ +++DAC + + + D+
Sbjct: 494 VGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFA 553
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+I + G++ EA ++DE RG +P T TL E A ++ + W ++
Sbjct: 554 YRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL-----EEAAMSNSVFEWTNLE 608
Query: 422 EKG 424
E
Sbjct: 609 ENA 611
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 250/557 (44%), Gaps = 80/557 (14%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P ++ L P + S+ + AL F++ P F HN +Y S+++ L RAR
Sbjct: 57 PSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIA-LRPGFKHNVHSYSSMLNILIRAR 115
Query: 93 AFDAVESL-LTELKQNPEIKCGENLFI-TVIRNYGLAG----RPEL--------AVKTFL 138
E + ++ +K I+ + LF+ V R G +P L ++ FL
Sbjct: 116 LLGVAEKIRISMIKSCCSIE--DVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFL 173
Query: 139 RIEKF----------NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-----P 183
I++ + ++ + N ++N Y + + + + K+V P
Sbjct: 174 LIDEMKTVYLELLNNQISPNIYTFNAMVNG------YCKIGNVVEAELYASKIVQAGLHP 227
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ FT LI C+ V+ A V MP G N V++T ++ G G I A ++F
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
D+ + P TYTVL+ GR +A+ + +EM++ G EPN TY V+I+ CK
Sbjct: 288 ADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE 347
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K EAR +L +M ++ +PS +ID C+EG ++DA E+ + +C P+
Sbjct: 348 NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407
Query: 364 STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAG------------------- 403
+ +I LCK+ K+ +A L ++ ER PSL+TYN+LI G
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 404 ----------------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+C+ + EAG L+D + KGV+ N Y LI G+CK+G
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLLT 506
+LE ML+ C PN ++++LIEGL + E +V+ M T ++ L+
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587
Query: 507 RIVSDLDSGAGALDELL 523
++ D GA D L
Sbjct: 588 EMLKD-----GAFDHAL 599
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 205/433 (47%), Gaps = 9/433 (2%)
Query: 66 YAGKFHPNFSHNYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
Y + S N T++++++ K+ + S + + +P+ +L + R
Sbjct: 182 YLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCR 241
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
N G+ A + FL + + QR+ S L++ L + R + +F +
Sbjct: 242 NKGVDN----AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-NCC 296
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P V T +LI AL A+ + +EM G PN+ T+T ++ G ++ A+++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ ++G +P TY L+DGY K G + DA +++D ME N PN TY +I CK
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K +A LL+ ML+RK PS +I C+ +E A L + +PD
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S I LCKEG++ EA LFD + +G + + Y LI G C+ ++ A L + M+
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
PN +TYN+LI+G CK KE ++ +ML G P ++++LI + + G
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 482 EVGKVVSMATASG 494
KV + + G
Sbjct: 597 HALKVFNHMVSLG 609
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 199/462 (43%), Gaps = 37/462 (8%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I L + D +L+E+ + I + +I Y G + A +
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT-YNALIDGYCKEGMIDDAFEI 391
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKA 194
+E + + R+ N L+ L + ++ VH + N + K+ P++ T N LI
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRK---VHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK +D+E A R+L M G+VP+ T++ + G +E A +F + +G +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
YT L+DGY K+G++ A +++ M ++ PN TY V+IE CK KK EA +L+
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
ML P+ +I + ++G + A +++ ++ PD + +H +G
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ E + + E G +P L+TY LI G A MV+ G +P+++ +
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688
Query: 434 MLIQGFCKIGNAKE-----------------------------GIRILEEMLDKGCFPNK 464
+LI+ KE +++ E+M++ GC +
Sbjct: 689 ILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDV 748
Query: 465 TSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLL 505
+ + LI G + E G V M S D +N LL
Sbjct: 749 SIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 790
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 203/449 (45%), Gaps = 21/449 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I L + + +L +K +K E ++ +I Y G+ ++A R
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKG-VKANEVIYTALIDGYCKVGKIDVAYSLLER 534
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + + N L+ L + K+ LV M V P V T ILI +
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT-----MGVKPTVVTYTILIGEM 589
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
K + A++V + M S+G P++ T+T L Y +G +E V + + G +PD
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD- 314
TYTVL+DGY +LG A + M D G +P+ ++I+ + E R+ +
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGI 709
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
D + A K ++ E A +L+++++ C D +I +I C++
Sbjct: 710 DSVSNVNSVDIADVWKTLE-------YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 762
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
++ EA+ L ERG PS YN+L+ C+ EA RL D MVE G+ P + +Y
Sbjct: 763 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 822
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATA 492
+L+ G G+ ++ + +L G ++ ++ +LI+GL + E +++ M
Sbjct: 823 LLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882
Query: 493 SGSVESDSWNFLLTRIVSDLDSGAGALDE 521
+ ++D L R+ + +S GAL++
Sbjct: 883 DATAQADIACAALMRLAAA-NSTKGALED 910
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 183/331 (55%), Gaps = 2/331 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + K++DLV + + + N++T NILI C++ + A+ +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLV-ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+T L+ G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D M G +PN VTYGV++ CK A NLL+ M K +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEF 386
+ID LC+ V+DA L+K + K P+ S++I LC G+ +A +L D
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E+ P+L+T+N LI + + EA +L DDM+++ ++P++FTYN LI GFC
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ ++ E M+ K CFP+ +++ LI+G +S
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 219/448 (48%), Gaps = 13/448 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P +L+S I + + DL + + + SHN TY+ +I+ R
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL--GISHNLYTYNILINCFCRRSQIS 62
Query: 96 AVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+LL +L P I +L + Y R AV ++ + + +
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 153 NTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
TL++ L + NK + V L+ + + + PN+ T +++ LCK+ D++ A +L++M
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ + ++V TI+ +++A +F ++ +G P+ TY+ L+ GR
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+DA +++ +M + + PN VT+ +I+AF K K EA L DDM++R P +
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I+ C +++ A ++++ ++ K+C PD +T+I CK ++ + +LF E RG
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ +TY TLI G+ + A +++ MV GV P++ TY++L+ G C G ++ +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + M + ++ +IEG+ ++G
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 198/411 (48%), Gaps = 7/411 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE--LAVKTF 137
T+ ++IH L +L+ + Q C NL + GL R + LA
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ V NT++++L + + D +FK K + PNV T + LI LC
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCS 232
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++L +M + PNLVT ++ +V G A+++ D++ R PD T
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++G+ RL A ++ + M P+ TY +I+ FCK K+ + L +M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R V + +I L +G ++A +++K+++ PD S ++ LC GK+
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++FD ++ I + Y T+I GMC++ ++ + L+ + KGV+PNV TYN +I
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G C +E +L++M + G P+ +++ LI G++ +++
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 184/380 (48%), Gaps = 3/380 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++ L + D +LL ++ + +I+ +F T+I + + A+
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ +V + ++L++ L R+ + + K K+ PN+ T N LI A
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFV 266
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A ++ D+M + P++ T+ +++ G+ ++ AK++F ++ + PD
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ K R+ D ++ EM G+ + VTY +I+ A+ + M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++D LC GK+E A E++ + + D I +T+I +CK GK+
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ LF +G P+++TYNT+I+G+C L EA L M E G P+ TYN L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 436 IQGFCKIGNAKEGIRILEEM 455
I+ + G+ ++ EM
Sbjct: 507 IRAHLRDGDKAASAELIREM 526
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 8/340 (2%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESL--LTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY S+I L + R DA + L + E K NP + F +I + G+ A
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT----FNALIDAFVKEGKFVEA 274
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K + K ++ + + N+L+N + R D MF+ K P++ T N LIK
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK-DCFPDLDTYNTLIK 333
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE + EM G+V + VT+TT++ G GD +NA++VF ++ G P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY++L+DG G+L A++V D M+ + ++ + Y MIE CK K + +L
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + P+ +I LC + +++A L K++ +PD+ +T+I ++
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA 413
G + +L E + L+A M L ++
Sbjct: 514 GDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 553
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 235/446 (52%), Gaps = 20/446 (4%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-A 96
WP R+ L+S + + A + Y +S + TY++++H + D A
Sbjct: 82 WPNRITYNALLSGLCNGGRMSDAQAL--YERMIKAGYSPDVVTYNTLLHGFCKVGKLDEA 139
Query: 97 VESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
++ +K+ P++ + +I + A + + A + R+ ++ V + N+
Sbjct: 140 LKIFDGAVKRGFVPDVVT----YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK-DDVEGAIRVLDEMPS 213
L+N L +N R D ++ + PNV T + LI LC++ +E A ++L++M
Sbjct: 196 LVNGLCKNGRVDEARMLIVDKGFS----PNVITYSTLISGLCRELRRLESARQLLEKMVL 251
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++V++ ++ G + A ++FG +L +G+ P+ TY +L+DG +K R+ +
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A ++ + +G+EP+ +TY V I+ CK + +A +L DM ++ VP VI+
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDE-FERGSI 391
LC+E +V++A L + K C P NAIS +T+I C+ GK +A F E +RG
Sbjct: 372 GLCKEKRVDEAEVLLSGMEAKGCSP-NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 430
Query: 392 PSLLTYNTLIAGMCESAE---LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
P+++TYN L+ G+C++ + + EA L+D M+EKG P+V TY+ LI G K G +
Sbjct: 431 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 490
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGL 474
R+L M KGC PN +++ LI GL
Sbjct: 491 RRLLGAMEAKGCIPNVYTYNSLISGL 516
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 216/421 (51%), Gaps = 45/421 (10%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
GR A + R+ K V + NTLL+ + + D +F + + VP+V
Sbjct: 98 GGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKR-GFVPDVV 156
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI CK D ++ A R+L M S +VP++VT+ +++ G G ++ A+ + I
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---I 213
Query: 247 LDRGWVPDATTYTVLMDGYIK-LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+D+G+ P+ TY+ L+ G + L RL A +++++M NG +P+ V+Y +I + +
Sbjct: 214 VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG 273
Query: 306 SGEARNLLDDMLQRKYVPS----------------------------------SALCCKV 331
EA L +L++ Y P A+ V
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333
Query: 332 -IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
ID LC+ G+VEDA + K + K C+PD + +I+ LCKE ++ EA+ L E +G
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI---GNAK 446
P+ +++NTLI G C + + +A + +M+++GV+P V TYN+L+ G CK G K
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLL 505
E I + + M++KG P+ ++S LI+GL ++G + +++ A G + + ++N L+
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513
Query: 506 T 506
+
Sbjct: 514 S 514
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 209/429 (48%), Gaps = 30/429 (6%)
Query: 82 HSIIHKLARARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
H++ KL R + DA V LL L ++ +I+ +L VK
Sbjct: 2 HTVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFV------------EQLLVKGLCD 49
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I FN+ ++ L + R +F R K PN T N L+ LC
Sbjct: 50 ISTFNIY---------ISGLCRASRIGDAQTVFDGMR-KHGFWPNRITYNALLSGLCNGG 99
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A + + M G P++VT+ T+L G+ G ++ A ++F + RG+VPD TY
Sbjct: 100 RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYN 159
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G+ K +L +A +++ M + P+ VTY ++ CK + EAR L+ D +
Sbjct: 160 ALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---K 216
Query: 320 KYVPSSALCCKVIDLLCEE-GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P+ +I LC E ++E A +L ++++ C PD + +IH L +E + E
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276
Query: 379 AKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A KLF R G P + TYN LI G+ + + EA L+ +V+ G+EP+ TY + I
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 336
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SV 496
G CK G ++ + +L++M +KGC P+ S + +I GL + E ++S A G S
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 396
Query: 497 ESDSWNFLL 505
+ S+N L+
Sbjct: 397 NAISFNTLI 405
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 195/389 (50%), Gaps = 13/389 (3%)
Query: 73 NFSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAG 128
FS N TY ++I L R R ++ LL ++ N P+I L + R G++
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
A+K F + + + V + N L++ L++ R + +F + K + P+ T
Sbjct: 277 ----ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELF-SGLVKHGLEPDAITY 331
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+ I LCK VE A+ +L +M G VP++V+H ++ G ++ A+ + +
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG- 307
+G P+A ++ L+ G + G+ A+ EM GV+P VTY ++++ CK ++ G
Sbjct: 392 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 451
Query: 308 --EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L D M+++ VP +ID L + GK++DA L + K C+P+ ++
Sbjct: 452 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I LC K+ EA +LF E+G +P +TY T+I+ +C+ + +A L+D +E G
Sbjct: 512 LISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAG 571
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
V P Y LI G C + E +++L+
Sbjct: 572 VVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 199/400 (49%), Gaps = 10/400 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+++ L + D L+ + +P + L + R R E A + +
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELR---RLESARQLLEK 248
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS-RHKFKVVPNVFTCNILIKALCKK 198
+ + + S N L++ L + + +F + R ++ P V T NILI L K+
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE--PEVPTYNILIDGLLKE 306
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D V A + + G+ P+ +T+T + G G +E+A + D+ ++G VPD ++
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++G K R+ +A ++ ME G PN +++ +I C+ K +A +ML+
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426
Query: 319 RKYVPSSALCCKVIDLLC---EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
R P+ ++D LC +EG++++A L+ ++ K +PD S +I L K GK
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A++L E +G IP++ TYN+LI+G+C ++ EA L+ MVEKG P+ TY
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+I CK + + + + L+ G P + LI+GL
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 7/348 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + R+Q + AL++F + TY+ +I L + +
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLF--GSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
L + L ++ ++ + I AGR E A+ +++ V S N ++N
Sbjct: 314 ELFSGLVKHG-LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L + KR D ++ K PN + N LI C+ + A+ EM G+ P
Sbjct: 373 LCKEKRVDEAEVLLSGMEAK-GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431
Query: 219 NLVTHTTILGGYV---WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+VT+ ++ G G I+ A +F ++++G VPD TY+ L+DG K G+L DA
Sbjct: 432 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 491
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+++ ME G PN TY +I C K EA L M+++ VP + +I L
Sbjct: 492 RLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
C++ V+ A L+ L +P + + ++I LC ++ EA KL
Sbjct: 552 CKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D L R + PDA T +L+ +K G++ A + ++++ G+ + T+ + I C+
Sbjct: 6 DKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRAS 64
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ G+A+ + D M + + W P+ +
Sbjct: 65 RIGDAQTVFDGMRKHGF--------------------------W---------PNRITYN 89
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ LC G++ +A+ L++ + G P ++TYNTL+ G C+ +L EA +++D V++
Sbjct: 90 ALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKR 149
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G P+V TYN LI GFCK E RIL+ M+ + P+ +++ L+ GL ++G E
Sbjct: 150 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA 209
Query: 484 GK-VVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
+V + + + L R + L+S L+++++ C
Sbjct: 210 RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGC 254
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 232/484 (47%), Gaps = 57/484 (11%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+I + N DL L+ + + K + + S + + ++H LA A+ + + S L +N
Sbjct: 74 LISSELNPDLCLRYYTWLVK-NRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGS 132
Query: 110 IKCGENLFITV----------------IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
++F + + Y R EL + F R + + S S
Sbjct: 133 DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCK 192
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L+ AL++ R V ++K + K+ PNVFT N++I ALCK + A V+++M
Sbjct: 193 PLMVALLKQNRSADVEYLYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKV 251
Query: 214 MGMVPNLVTHTTILGGY-------------------------------------VWRGD- 235
G PN+V++ T++ GY W+ D
Sbjct: 252 YGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDN 311
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ + +VF ++LD+ +P+ TY L++G G++ +A+ + D+M GV+PN +TY
Sbjct: 312 LPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHS 371
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FCK EA ++ D + + P++ + +ID C+ GK++D L + + R+
Sbjct: 372 LINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD + +I LC+ G I AKKLFD+ +P L+T++ L+ G C E +A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAM 491
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGL 474
L +M + G++P TYN++++G+CK GN K + +M ++ N S+++L++G
Sbjct: 492 LLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 475 YESG 478
+ G
Sbjct: 552 SQKG 555
>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
Length = 788
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 242/487 (49%), Gaps = 26/487 (5%)
Query: 36 KPWPQRL----------YPKRLVSMIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSI 84
+PW RL + + LV + R ++ D AL F + K F H+ DTY I
Sbjct: 126 RPWTTRLQNSIRSLARSFDQSLVLAVLRGARHPDHALHFFRWVEK--TGFRHDPDTYREI 183
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
I LARA + +L + + + E++F ++I YG A P+ AVK F R+ +
Sbjct: 184 ILLLARASMLNHARCILLDDMPDRLVPPSEDMFASLIEGYGCARIPQEAVKIFRRLPELG 243
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V R+VRS + + A++++ R + +F N+ V+P + T N L+ C +E A
Sbjct: 244 VTRTVRSYDAVFKAILRSGRVAMARRLF-NAMIAEGVLPVLSTYNTLLWGFCLSIKMETA 302
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
R +M G+ P+LVT+ TIL G+ +++A++VF ++ G+ P++ +Y +++ G
Sbjct: 303 QRFFADMKERGIAPDLVTYNTILNGWARAKKMDDAEKVFAEMTAAGFAPNSISYNIMIKG 362
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG-KKSGEARNLLDDMLQRKYVP 323
Y+ GR+ D +++ EM + G+ +E T+ ++ C ++ EAR L++M + + P
Sbjct: 363 YVCSGRVDDGLRMFSEMGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQLTP 422
Query: 324 SS-ALCCKVIDLLCEEGKVEDACELWKRLLRKN-CMPDNAISSTIIHWLCKEGKIWEAKK 381
S ++ +++ LCE G +E A E+ ++ + N + D ++ LCK K A
Sbjct: 423 SDKSIFLRLVTSLCESGDLEGALEVHRKTSQFNHVVVDPMQYGVLLESLCKGEKHESAIA 482
Query: 382 LFDE-FERGSI-----PSL--LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
L DE E+G++ P+L YN +I +C+ + +A + +++KGV+ V +N
Sbjct: 483 LLDELLEKGTMQSPQYPTLEPSAYNPMIEYLCDHGDTKKAEAFFRQLMKKGVDDKV-AFN 541
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
LI+G K G + IL M G + S+ LL+E + + +
Sbjct: 542 SLIRGHAKEGMPEAASEILTIMTRHGVPTDADSYVLLVESFLKKSEPADARTALDSMMEQ 601
Query: 494 GSVESDS 500
G + S S
Sbjct: 602 GHLPSAS 608
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 201/439 (45%), Gaps = 21/439 (4%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R + +D A ++F A F+ N +Y+ +I + D + +E+ + ++
Sbjct: 330 RAKKMDDAEKVF--AEMTAAGFAPNSISYNIMIKGYVCSGRVDDGLRMFSEMGEKG-LRF 386
Query: 113 GENLFITVIRNYGL---AGRPELAVKTFLRIEKFNVQRSVRSLN-TLLNALVQNKRYDLV 168
E F ++ GL GR A K + K + S +S+ L+ +L ++ +
Sbjct: 387 SEKTFAALMP--GLCDDVGRAAEARKALNEMAKLQLTPSDKSIFLRLVTSLCESGDLEGA 444
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV-----PNL--V 221
+ + + VV + +L+++LCK + E AI +LDE+ G + P L
Sbjct: 445 LEVHRKTSQFNHVVVDPMQYGVLLESLCKGEKHESAIALLDELLEKGTMQSPQYPTLEPS 504
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+ ++ GD + A+ F ++ +G V D + L+ G+ K G A +++ M
Sbjct: 505 AYNPMIEYLCDHGDTKKAEAFFRQLMKKG-VDDKVAFNSLIRGHAKEGMPEAASEILTIM 563
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+GV + +Y +++E+F K + +AR LD M+++ ++PS++L V+ L ++G+V
Sbjct: 564 TRHGVPTDADSYVLLVESFLKKSEPADARTALDSMMEQGHLPSASLFRSVMVALFDDGRV 623
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTL 400
+ A + K ++ K + + I+ L G + EA ++ P + + L
Sbjct: 624 QTASRVMKSMIEKGVKENMDMVHKILDALFMRGHVEEALGRINLMIMNDCTPDI---DHL 680
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ +C+S + TEA +L + +E+ + + +Y+ ++ G IL ++ KG
Sbjct: 681 LITLCDSDKATEAQKLVEFALERDCDVSFSSYDRVLDVLYTAGKTLPAYSILCKIKAKGG 740
Query: 461 FPNKTSFSLLIEGLYESGN 479
+K +I+ L GN
Sbjct: 741 VVDKKGCDAIIKSLIAEGN 759
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 149/358 (41%), Gaps = 21/358 (5%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL- 104
RLV+ + +L+ AL++ +F+ + + Y ++ L + ++ +LL EL
Sbjct: 430 RLVTSLCESGDLEGALEVHRKTSQFN-HVVVDPMQYGVLLESLCKGEKHESAIALLDELL 488
Query: 105 ----KQNPEIKCGE----NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
Q+P+ E N I + ++G + E F ++ K V V + N+L+
Sbjct: 489 EKGTMQSPQYPTLEPSAYNPMIEYLCDHGDTKKAE---AFFRQLMKKGVDDKV-AFNSLI 544
Query: 157 NALVQNKRYDLV-HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ + ++ +RH + + +L+++ KK + A LD M G
Sbjct: 545 RGHAKEGMPEAASEILTIMTRHGVPTDADSYV--LLVESFLKKSEPADARTALDSMMEQG 602
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+P+ +++ G ++ A RV ++++G + ++D G + +A+
Sbjct: 603 HLPSASLFRSVMVALFDDGRVQTASRVMKSMIEKGVKENMDMVHKILDALFMRGHVEEAL 662
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ M N P+ ++ C K+ EA+ L++ L+R S + +V+D+L
Sbjct: 663 GRINLMIMNDCTPD---IDHLLITLCDSDKATEAQKLVEFALERDCDVSFSSYDRVLDVL 719
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS 393
GK A + ++ K + D II L EG +A + G PS
Sbjct: 720 YTAGKTLPAYSILCKIKAKGGVVDKKGCDAIIKSLIAEGNTKQA-DILSRILAGKAPS 776
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 228/462 (49%), Gaps = 41/462 (8%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V +F++ + A +FH + N TY+S+IH L +ARA D + +L ++
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQ--QGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
N ++ + T+I Y G+ + AV+
Sbjct: 275 NG-VQPDNVTYNTLIHGYSTLGQWKQAVR------------------------------- 302
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
MFK + V+PN TC+ + LCK +E A D M + G N+++++T+
Sbjct: 303 ----MFKEMTSR-GVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTL 357
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
L GY G + + +F ++ G VP+ + +L++GY K G + +A+ + ++M+ G+
Sbjct: 358 LHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGL 417
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ +TY +I AFC+ +A + + M+ + P+ A+ +I C G + A E
Sbjct: 418 NPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEE 477
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
L + K P +++I+ LCKEG+++EA+++FD R G + + +LI G C
Sbjct: 478 LVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYC 537
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+++EA R+ D MV G+EP++ TY L+ G CK G +G+ + E+L KG P
Sbjct: 538 LIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTF 597
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLT 506
++ ++++GL+ +G ++ SG +V +++ LLT
Sbjct: 598 TYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLT 639
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 155/342 (45%), Gaps = 49/342 (14%)
Query: 182 VPNVFTCNILI-----------------------------------KALCKKDDVEGAIR 206
+P V+T +ILI + LC + A+
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159
Query: 207 VL-DEMPSMGMVPNLVTHTTIL------GGYVWRGDIENAKRVFGDILDRGWVP-DATTY 258
VL MP +G VP+ ++++T+L G W DI + G P + Y
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMA-----VKQGGGCPCNVVVY 214
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+ ++ G K G++ +A + EM GV PN VTY +I A CK + +A+ +L M+
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P + +I G+ + A ++K + + +P+ ST + +LCK G+I E
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A++ FD +G ++++Y+TL+ G + L + L++ MV G+ PN +N+L+
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G+ K G +E + I E+M +G P+ ++ +I G+
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 186/403 (46%), Gaps = 3/403 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y +++H A A + +L + ++ + +++F ++ Y G A+
Sbjct: 350 NIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP-NQHVFNILVNGYAKCGMVREAMFI 408
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++K + V + +++A + D F + K V PN LI+ C
Sbjct: 409 FEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK-GVEPNFAVYQCLIQGFC 467
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
D+ A ++ E+ + G+ P +++ +++ G + A+R+F I+ G D
Sbjct: 468 THGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVN 527
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+T L+DGY +G++++A +V D M G+EP+ VTYG ++ CK + + L ++
Sbjct: 528 IFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFREL 587
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L + P++ ++D L G+ A E+++ ++ S ++ LC+
Sbjct: 588 LHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCT 647
Query: 377 WEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA +F + ++ ++ N +I+ M ++ EA L+ + + G+ P V TY ++
Sbjct: 648 EEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIM 707
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ K G+ +E + ML G P ++++ L E G
Sbjct: 708 MENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKG 750
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 130/250 (52%), Gaps = 4/250 (1%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R +P TY++L+D + RL A + G++ + + ++ C K++ E
Sbjct: 97 RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDE 156
Query: 309 ARNLL-DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISST 365
A ++L M + VP + V+ +C++G+ + A ++ + +++ C + + ST
Sbjct: 157 AVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYST 216
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++H L KEGK+ EA LF E ++G P+++TYN++I +C++ + +A + MV G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
V+P+ TYN LI G+ +G K+ +R+ +EM +G PN + S + L + G E
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336
Query: 485 KVVSMATASG 494
+ A G
Sbjct: 337 EFFDSMLAKG 346
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 162/375 (43%), Gaps = 5/375 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++IH R + D + + ++ ++ +I+ + G A +
Sbjct: 423 TYLAVIHAFCRMGSMDDAMDKFNHMI-DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYE 481
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS-RHKFKVVPNVFTCNILIKALCKK 198
I + + S +L+N L + R +F R K N+FT LI C
Sbjct: 482 IRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS--LIDGYCLI 539
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A RV D M S+G+ P++VT+ T++ G G I++ +F ++L +G P TY
Sbjct: 540 GKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTY 599
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++DG GR A ++ EM ++G+ TY +++ C+ + EA + +
Sbjct: 600 GIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCA 659
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ +I + + + E+A L+ + +P + ++ L KEG + E
Sbjct: 660 MNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEE 719
Query: 379 AKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ +F + G P+ N ++ + E E+ +AG + K + T +ML+
Sbjct: 720 AEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLS 779
Query: 438 GFCKIGNAKEGIRIL 452
F G +E + +L
Sbjct: 780 LFSCKGKHREHLNLL 794
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 230/467 (49%), Gaps = 28/467 (5%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L P L++ + ++ AL+ F+ A + N Y +IIH L ++ LL
Sbjct: 28 LTPDSLITTVLNCRSPWKALEFFNAAPE------KNIQLYSAIIHVLVGSKLLSHARYLL 81
Query: 102 TELKQN------PEIKCGENLFITVIR---------NYG----LAGRPELAVKTFLRIEK 142
+L QN P C + F + R YG + + EL + K
Sbjct: 82 NDLVQNLVKSHKPYHAC-QLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHK 140
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
++++ N LL LV+ R++L+ +++ + P+V T LI C++ D+
Sbjct: 141 VGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISN-GLSPSVITFGTLIDGCCRQGDLL 199
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A + DEM G+VP ++ +T ++ G IE A+ + + + G P+ TY LM
Sbjct: 200 RAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLM 259
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
DGY KL A+++ +M G+ P+ VT+G++I+ CK + ARNL +M++
Sbjct: 260 DGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ A+ +ID C+ G V +A L+ L R PD S +I LC + EA +
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNI 379
Query: 383 FDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F++ + G + + +TYN+LI G C+ ++ +A + M E GVEPNV T++ LI G+CK
Sbjct: 380 FEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
I N + + I EM+ K P+ +++ +I+G + G+ E K+ S
Sbjct: 440 IRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYS 486
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 18/316 (5%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
KF V PN+ N LI A CK DV A+ + E+ + P++ T++ ++ G E
Sbjct: 315 KFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTE 374
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A +F + G + ++ TY L+DG K G++ A+++ +M +NGVEPN +T+ +I
Sbjct: 375 EAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLI 434
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ +CK + A + +M+ + P +ID C+ G +++A +L+ +L
Sbjct: 435 DGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGIT 494
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFD---EFER--------GSIPSL---LTYNTLIAG 403
P+ S ++ LCK+GKI +A +LF EF+ GS PSL + Y LI G
Sbjct: 495 PNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHG 554
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE-EMLDKGCFP 462
+C+ + ++A +L+ DM G++P+ Y ++++G ++ K + +L +ML G P
Sbjct: 555 LCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV---KYILMMLHADMLKFGVIP 611
Query: 463 NKTSFSLLIEGLYESG 478
N +L E ESG
Sbjct: 612 NSAVHVILCECYQESG 627
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 187/385 (48%), Gaps = 20/385 (5%)
Query: 155 LLNALVQN-----KRYDLVHLMFKN-SRHKF-KVVPNVFTCNILIKALCKKDDVEGAIRV 207
LLN LVQN K Y L F SR K K PNV+ LI LCK + VE A+ +
Sbjct: 80 LLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVY--GELIIVLCKMELVEEALSM 137
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ G + +L V G E R++ +++ G P T+ L+DG +
Sbjct: 138 YHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCR 194
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G L A ++ DEM G+ P + Y ++I C K EA ++ M + P+
Sbjct: 195 QGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYT 254
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++D C+ + A L++ +L + +PD +I LCK G++ A+ LF
Sbjct: 255 YNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMI 314
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ S+ P++ YN+LI C+ +++EA L+ ++ V P+VFTY++LI+G C + +
Sbjct: 315 KFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTE 374
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
E I E+M +G N +++ LI+G + G + ++ S T +G VE + F T
Sbjct: 375 EAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG-VEPNVITF-ST 432
Query: 507 RI-----VSDLDSGAGALDELLVKN 526
I + +L + G E+++K+
Sbjct: 433 LIDGYCKIRNLQAAMGIYSEMVIKS 457
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 220/440 (50%), Gaps = 20/440 (4%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSH-NYDTYHSIIHKLARARAFDAVESLLTEL 104
+L S + LD A+ +F Y + P S ++ ++ ++ R D V SL ++
Sbjct: 51 KLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRP---DVVISLHKKM 107
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ + C F +++ + + A+ TF +I K +V + NTLL+ L R
Sbjct: 108 EM-LRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDR 166
Query: 165 ----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
DL H M K PNV T L+ LC++ V A+ +LD M G+ PN
Sbjct: 167 ISEALDLFHQMCK---------PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQ 217
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+T+ TI+ G GD +A + + + +P+ Y ++DG K GR +DA +
Sbjct: 218 ITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFI 277
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM++ + P+ VTY MI FC + +A LL +ML+RK P +I+ +EG
Sbjct: 278 EMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEG 337
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYN 398
K +A EL+ +L ++ +P S++I CK+ ++ A+ +F +G P ++T+N
Sbjct: 338 KFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFN 397
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TLIAG C + + + +L +M E G+ N TY LI GFC++G+ +L+EM+
Sbjct: 398 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS 457
Query: 459 GCFPNKTSFSLLIEGLYESG 478
G PN + + L++GL ++G
Sbjct: 458 GVCPNVVTCNTLLDGLCDNG 477
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 212/415 (51%), Gaps = 13/415 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I+ + + + +LL ++++ I ++ T+I GR A
Sbjct: 216 NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNL 275
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F+ +++ + + + N ++N + R+ + + + K+ P+V T + LI A
Sbjct: 276 FIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER-KINPDVVTFSALINAFV 334
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A + DEM ++P+ VT+++++ G+ + ++ A+ +F +G PD
Sbjct: 335 KEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDII 394
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+ L+ GY + R+ D +K++ EM + G+ N +TY +I FC+ A++LL +M
Sbjct: 395 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 454
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISST 365
+ P+ C ++D LC+ GK++DA E++K + + PD +
Sbjct: 455 ISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNI 514
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++D M K
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 574
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
P+V T+N LI G+CK G +G+ + EM +G + ++ LI G + N
Sbjct: 575 FSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDN 629
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 181/369 (49%), Gaps = 7/369 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GRP++ + ++E + + S L+ + F K P V T
Sbjct: 95 GRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTF-GKITKLGFHPTVVT 153
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N L+ LC +D + A+ + +M PN+VT TT++ G G + A + +L
Sbjct: 154 FNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRML 209
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED-NGVEPNEVTYGVMIEAFCKGKKS 306
+ G P+ TY ++DG K+G A+ ++ +ME+ + + PN V Y +I+ K +
Sbjct: 210 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRH 269
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A NL +M +++ P +I+ C G+ DA +L + +L + PD S +
Sbjct: 270 SDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSAL 329
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ KEGK +EA++L+DE R IPS +TY+++I G C+ L A ++ KG
Sbjct: 330 INAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGC 389
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P++ T+N LI G+C+ +GI++L EM + G N +++ LI G + G+
Sbjct: 390 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 449
Query: 486 VVSMATASG 494
++ +SG
Sbjct: 450 LLQEMISSG 458
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 190/391 (48%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I+ + + E LL E+ K NP++ F +I + G+ A +
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVT----FSALINAFVKEGKFFEAEEL 345
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + ++ S + +++++ + R D MF + K P++ T N LI C
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTK-GCSPDIITFNTLIAGYC 404
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ V+ I++L EM G+V N +T+TT++ G+ GD+ A+ + +++ G P+
Sbjct: 405 RAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVV 464
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ TY ++I K
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGK 524
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M R VP + +ID LC++ ++++A +++ + K+ PD +T
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 584
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I CK G + + +LF E +RG + +TY TLI G + + A ++ +M+ G
Sbjct: 585 LITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG 644
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ G + + +LE++
Sbjct: 645 VYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 140/325 (43%), Gaps = 25/325 (7%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY S+I + DA E + P C ++ F T+I Y A R + +K
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMF---YLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + + + TL++ Q N DL+ M + V PNV TCN L+
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSG-----VCPNVVTCNTLLD 471
Query: 194 ALCKKDDVEGAIRVLDEM-----------PSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
LC ++ A+ + M P G+ P++ T+ ++ G + G A+ +
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEEL 531
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ ++ RG VPD TY+ ++DG K RL +A ++ D M P+ VT+ +I +CK
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCK 591
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ L +M QR V + +I + ++ A ++++ ++ PD
Sbjct: 592 AGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE 387
++ L + ++ A + ++ +
Sbjct: 652 IRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 21/300 (7%)
Query: 31 VTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR 90
+TP P + L++ R + +D +++ H + N TY ++IH +
Sbjct: 383 LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE--AGLVANTITYTTLIHGFCQ 440
Query: 91 ARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK----- 142
+A + LL E+ + P + L + N G+ + A++ F ++K
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN----GKLKDALEMFKAMQKSKMDI 496
Query: 143 -----FN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
FN V+ V++ N L+ L+ ++ +++ H+ +VP+ T + +I LC
Sbjct: 497 DASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLC 555
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A ++ D M S P++VT T++ GY G +++ +F ++ RG V DA
Sbjct: 556 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAI 615
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ K+ + A+ + EM +GV P+ +T M+ ++ A +L+D+
Sbjct: 616 TYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 13/302 (4%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P P + ++ +Q LD A +F+ S + T++++I RA+
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPT--KGCSPDIITFNTLIAGYCRAKR 408
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D LL E+ + + + T+I + G A + V +V + N
Sbjct: 409 VDDGIKLLHEMTE-AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467
Query: 154 TLLNALVQNKRYDLVHLMFKN----------SRHKFKVVPNVFTCNILIKALCKKDDVEG 203
TLL+ L N + MFK SR V P+V T NILI L +
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLE 527
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A + +EMP G+VP+ +T+++++ G + ++ A ++F + + + PD T+ L+
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLIT 587
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K G + D +++ EM G+ + +TY +I F K A ++ +M+ P
Sbjct: 588 GYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYP 647
Query: 324 SS 325
+
Sbjct: 648 DT 649
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 224/423 (52%), Gaps = 12/423 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE----NLFITVIRNYGLAGRPEL 132
N TY + I ++A + + E+ + CG ++ +I + G
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEM-----LSCGVLPNVGIYTALIEGHCKEGNVTE 583
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A F I V + V++ + L++ L +N + +F + K ++PN FT N LI
Sbjct: 584 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK-GLLPNAFTYNSLI 642
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK+ +V+ A ++L+EM G+ P++VT+ ++ G G+IE AK +F DI RG
Sbjct: 643 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 702
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY ++DGY K T A ++++EM GV P+ Y V++ CK +K +A +L
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 762
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ML++ + + + +I+ C+ GK+++A L + ++ K +P++ +++I CK
Sbjct: 763 FQEMLEKGFASTVSFN-TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EAK+L+ E ER +P+ TY +L+ G ++E L+++MV KG+EP+ T
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y ++I +C+ GN E ++ +E+L KG + ++ LI+ L + EV K+++
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIG 941
Query: 492 ASG 494
SG
Sbjct: 942 ESG 944
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 208/407 (51%), Gaps = 4/407 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S+I +A+ + + L E+ + ++ + + I Y AG E+A + F +
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLER-RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 556
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V +V L+ + +F+ + +V+ +V T ++LI L +
Sbjct: 557 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR-RVLQDVQTYSVLIHGLSRNGK 615
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A + E+ G++PN T+ +++ G +G+++ A ++ ++ +G PD TY +
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+DG K G + A + D++E G+ PN VTY M++ +CK K A LL++ML R
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + + +++ C+E K E A +L++ +L K +T+I CK GK+ EA
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEAN 794
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L +E E+ IP+ +TY +LI C++ + EA RLW +M E+ V P TY L+ G+
Sbjct: 795 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 854
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
IGN E + EEM+ KG P+K ++ ++I+ GN E K+
Sbjct: 855 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 901
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 216/486 (44%), Gaps = 40/486 (8%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R QN+ A ++ K + TY II+ L R ++L E+ N +K
Sbjct: 402 RGQNMARAFELLDEMKK--RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-LKP 458
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
++ T++ + GR E + R+ + + V N+L+ + KR +
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 518
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ ++ PN T I K ++E A R +EM S G++PN+ +T ++ G+
Sbjct: 519 MEMLER-RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 577
Query: 233 RGDIENAKRVFGDILDR-----------------------------------GWVPDATT 257
G++ A VF IL R G +P+A T
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 637
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L+ G K G + A ++++EM G+ P+ VTY ++I+ CK + A+NL DD+
Sbjct: 638 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 697
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R P+ ++D C+ A +L + +L + PD I + I+++ CKE K
Sbjct: 698 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFE 757
Query: 378 EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+A LF E S +++NTLI G C+S +L EA L ++M+EK PN TY LI
Sbjct: 758 KALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 817
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
CK G E R+ EM ++ P +++ L+ G + GN EV + A G +E
Sbjct: 818 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG-IE 876
Query: 498 SDSWNF 503
D +
Sbjct: 877 PDKMTY 882
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 210/405 (51%), Gaps = 11/405 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCG--ENLFI--TVIRNYGLAGRPELAVK 135
TY+++I R + + E+ + CG NL I T++ AG+ E A++
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEM-----VACGIEANLIIWNTLLNGVCKAGKMEKALE 376
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + V+ ++ + L+ + + + + K K+ P V T +++I L
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK-KRKLAPTVLTYSVIINGL 435
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ +++G +L EM G+ PN V +TT++ + G +E ++ + + ++G +PD
Sbjct: 436 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 495
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+ G+ K R+ +A + EM + + PN TYG I+ + K + A ++
Sbjct: 496 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 555
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML +P+ + +I+ C+EG V +A +++ +L + + D S +IH L + GK
Sbjct: 556 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EA +F E E+G +P+ TYN+LI+G C+ + +A +L ++M KG+ P++ TYN+
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
LI G CK G + + +++ +G PN +++ +++G +S N
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 191/371 (51%), Gaps = 2/371 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +I + G + A + L + + ++ + N ++ L + + D + K S
Sbjct: 218 YTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA-IELKRSM 276
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+VP+++T +ILI C + A +L EM +G+ P +T+ ++ G++ +GDI
Sbjct: 277 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDI 336
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E A R+ +++ G + + L++G K G++ A+++M EM + GVEP+ TY ++
Sbjct: 337 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 396
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
IE C+G+ A LLD+M +RK P+ +I+ LC G ++ + + ++
Sbjct: 397 IEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL 456
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ + +T++ KEG++ E++ + + E+G +P + YN+LI G C++ + EA
Sbjct: 457 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 516
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+M+E+ + PN TY I G+ K G + R EML G PN ++ LIEG
Sbjct: 517 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Query: 476 ESGNEGEVGKV 486
+ GN E V
Sbjct: 577 KEGNVTEAFSV 587
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 223/443 (50%), Gaps = 44/443 (9%)
Query: 75 SHNYDTYHSIIHKLARARAFD-AVE--------SLLTEL-------------KQNPEIKC 112
S N TY+ II L RAR D A+E L+ +L K++ E K
Sbjct: 247 SPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAK- 305
Query: 113 GENLFITVIRNYGLAGRP---ELAVKTFLR---IEK-FNVQRSVRSL---------NTLL 156
L + + + GL P + F+R IE+ F ++ + + NTLL
Sbjct: 306 ---LMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 362
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
N + + + + + + K V P+ T ++LI+ C+ ++ A +LDEM +
Sbjct: 363 NGVCKAGKMEKALEIMQEMMEK-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P ++T++ I+ G G+++ + +++ G P+A YT LM + K GR+ ++
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+++ M + G+ P+ Y +I FCK K+ EAR L +ML+R+ P++ ID
Sbjct: 482 ILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYS 541
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLL 395
+ G++E A + +L +P+ I + +I CKEG + EA +F R + +
Sbjct: 542 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 601
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY+ LI G+ + ++ EA ++ ++ EKG+ PN FTYN LI G CK GN + ++LEEM
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661
Query: 456 LDKGCFPNKTSFSLLIEGLYESG 478
KG P+ ++++LI+GL ++G
Sbjct: 662 CIKGINPDIVTYNILIDGLCKAG 684
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 162/301 (53%), Gaps = 1/301 (0%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F+ P++ +CN L+ L K + VE +V D M + ++P++ T+T ++ + G++++
Sbjct: 174 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 233
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AKRV ++ ++G P+ TY V++ G + L +A+++ M D G+ P+ TY ++I
Sbjct: 234 AKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILIN 293
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FC K+S EA+ +L +M+ P +ID +G +E A + ++
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA 353
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ I +T+++ +CK GK+ +A ++ E E+G P TY+ LI G C + A L
Sbjct: 354 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 413
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D+M ++ + P V TY+++I G C+ GN + IL EM+ G PN ++ L+ +
Sbjct: 414 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKE 473
Query: 478 G 478
G
Sbjct: 474 G 474
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 163/328 (49%), Gaps = 14/328 (4%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTC-------------NILIKALCKKDDVEGAIRVLDEMP 212
DL+ + +NS V+ ++ C ++L+ + K + A+ V
Sbjct: 113 DLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPK 172
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ P+L++ ++LG + +E +VF + +PD TYT ++ + K+G +
Sbjct: 173 NFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVK 232
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
DA +V+ EM + G PN VTY V+I C+ + EA L M+ + VP +I
Sbjct: 233 DAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILI 292
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP 392
+ C E + +A + ++ P+ + +I ++G I +A ++ DE I
Sbjct: 293 NGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE 352
Query: 393 S-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ L+ +NTL+ G+C++ ++ +A + +M+EKGVEP+ TY++LI+G C+ N +
Sbjct: 353 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 412
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L+EM + P ++S++I GL GN
Sbjct: 413 LDEMKKRKLAPTVLTYSVIINGLCRCGN 440
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 171/387 (44%), Gaps = 18/387 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+S+I + D LL E+ NP+I + +I AG E A
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT----YNILIDGLCKAGEIERA 689
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCN 189
F IE + + + +++ ++K + L+ M V P+ F N
Sbjct: 690 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG-----VPPDAFIYN 744
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+++ CK++ E A+ + EM G V+ T++ GY G ++ A + +++++
Sbjct: 745 VILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEK 803
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
++P+ TYT L+D K G + +A ++ EM++ V P TY ++ + E
Sbjct: 804 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 863
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L ++M+ + P +ID C EG V +AC+L +L K A +I
Sbjct: 864 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQA 923
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK+ + +E KL +E E G L T + + G + + EA + MV+ G N
Sbjct: 924 LCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEM 455
+ L+ G N+++ +L++M
Sbjct: 984 TTSLGDLVDGNQNGANSEDSDNLLKQM 1010
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 232/461 (50%), Gaps = 17/461 (3%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPE 131
S ++ TY S+I L + + + L ++ +P++ + VI + R
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVY----TYTAVIHALCVENRLH 63
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K + N+ +V + L++ L + R D + S+ + K VP T N L
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALL--SKMRKKCVPTAVTYNSL 121
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LCK + A +L+EM G +P++ T+TT++ G+ ++A RVF ++ RG+
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY+ L+DG K GRL +A+ + M +G PN VTY +I FC+ K EA
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
NLL+ M + P +++ C+ +++DA +L ++ RK PD ++++ L
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+E ++ +A + E R S P++ TYNT++ G C + +L EA + + E PNV
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNV 359
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-S 488
++N++I+G CK+ + E + ++EE + C P+ ++ +I+GL E +V
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 489 MATASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKN 526
M G + S +++ L+T + + LD G +++ V N
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPN 460
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 217/454 (47%), Gaps = 61/454 (13%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL------FITVIRN 123
FHP+ TY ++IH L VE+ L E ++ E NL + +I
Sbjct: 42 FHPDVY----TYTAVIHALC-------VENRLHEARKFLEEMANRNLTPNVVTYTVLIDG 90
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKF 179
GR + AV ++ K V +V + N+L++ L + +R YDL+ M +
Sbjct: 91 LCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYSG---- 145
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+P++FT LI CK + A+RV +++ + G P++VT++ ++ G G ++ A
Sbjct: 146 -CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 240 KRVFGDILDRG-WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+FG ++ G +P+ TY L+ G+ ++G++ +A+ +++ M + G P+ VTY ++
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK + +A +LL+ M ++ P ++D LC E ++ DA + + RK+C P
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+TI+ C+ ++ EA+K E E P+++++N +I G+C+ +EA L +
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLE-EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD--------------------- 457
+ + P+V Y +I G C+ E R+ +ML+
Sbjct: 384 EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNA 443
Query: 458 -----------KGCFPNKTSFSLLIEGLYESGNE 480
KGC PN +++LLI+ ++ +
Sbjct: 444 GMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRD 477
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 196/385 (50%), Gaps = 15/385 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY+S+I L +A LL E+ + C ++F T+I + + + + A++ F
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYS---GCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + V + + L++ L + R +F +PN T N LI C+
Sbjct: 174 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A+ +L+ M G P++VT+TT++ G+ +++A + + +G PD T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T LMDG + RL+DAV ++ EM P TY +++ +C+ + EAR ML
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---ML 350
Query: 318 QRKYVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P + + + I LC+ + +A EL + R+ C PD + +T+I LC+E K+
Sbjct: 351 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 377 WEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EA +++ + E G +P+ +TY+TLI G+C + L A +EKG PN+ TYN+
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNL 466
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKG 459
LI F K ++ +L++M+ +G
Sbjct: 467 LIDAFRKANRDEDARELLDDMVQRG 491
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 118/220 (53%)
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
N + VTY +I+ CK K+ +A L M+ + + P VI LC E ++ +
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG 403
A + + + +N P+ + +I LCK G++ EA L + + +P+ +TYN+LI+G
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C++ +EA L ++MV G P++FTY LI GFCK + + +R+ E+++ +G P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
++S LI+GL + G E + SGS ++ +
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 224
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
P + L+S R +D A+ + + S + TY ++++ + D
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAE--TGSSPDVVTYTTLMNGFCKLARLDDA 275
Query: 98 ESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
LL ++ + P++ +L + R L+ AV + + + +V + NT
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD----AVHILGEMRRKSCSPTVYTYNT 331
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L+ + + + K + PNV + NI+I+ LCK + A+ +++E
Sbjct: 332 ILDGYCRANQLEEAR---KFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTVLMDGYIKLGRLTD 273
P++V +TT++ G ++ A RV+ +L+ G +P++ TY+ L+ G G L
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDR 448
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
A +++ G PN TY ++I+AF K + +AR LLDDM+QR +
Sbjct: 449 ARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 184/352 (52%), Gaps = 12/352 (3%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
++N + R+ + + + K+ P+V T N LI A K+ A + DEM
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++P+ +T+++++ G+ + ++ A+ +F + +G PD T+ L+ GY + R+ D
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+K++ EM + G+ N +TY +I FC+ A++LL +M+ P+ C ++D
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 335 LCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
LC+ GK++DA E++K + + PD + +I L EGK EA++L+
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+E RG +P +TYN++I G+C+ + L EA +++D M K PNV T+ LI G+CK
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G +G+ + EM +G N ++ LI G + GN + ASG
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASG 612
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 200/414 (48%), Gaps = 33/414 (7%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ R D V SL +++ + C F +++ + + A+ TF +I K
Sbjct: 88 VVRMGRLDVVISLHRKMEMR-RVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHP 146
Query: 148 SVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
+V + +TLL+ L R DL H M K PNV T L+ LC++ V
Sbjct: 147 TVVTFSTLLHGLCVEDRISEALDLFHQMCK---------PNVVTFTTLMNGLCREGRVVE 197
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTY---- 258
A+ +LD M G+ PN +T+ TI+ G GD +A + + + + P+ +
Sbjct: 198 AVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLER 257
Query: 259 -TVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T +++G+ GR ++A +++ EM E + P+ VTY +I AF K K EA L D+M
Sbjct: 258 RTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEM 317
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L R +PS+ +ID C++ +++ A ++ + K C PD +T+I C+ ++
Sbjct: 318 LPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRV 377
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ KL E E G + + +TY TLI G C+ +L A L +MV GV PNV T N L
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTL 437
Query: 436 IQGFCKIGNAKEGIRILEEM----LD-------KGCFPNKTSFSLLIEGLYESG 478
+ G C G K+ + + + M +D G P+ ++++LI GL G
Sbjct: 438 LDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 184/382 (48%), Gaps = 41/382 (10%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP-NVFTCNILIKALCKKDDVEGAIR 206
SV L+ +V+ R D+V + + + + + VP N ++ IL+K C + A+
Sbjct: 77 SVIDFCKLMGVVVRMGRLDVVISLHR--KMEMRRVPCNAYSFTILMKCFCSCSKLPFALS 134
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
++ +G P +VT +T+L G I A +F + P+ T+T LM+G
Sbjct: 135 TFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLC 190
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
+ GR+ +AV ++D M ++G++PN++TYG +++ CK + A NLL M + ++ +
Sbjct: 191 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNV 250
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +W L R+ CM I+ C G+ EA++L E
Sbjct: 251 V-------------------IWP-LERRTCM---------INGFCSSGRWSEAQQLLQEM 281
Query: 386 FERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
ER I P ++TYN LI + + EA L+D+M+ +G+ P+ TY+ +I GFCK
Sbjct: 282 LERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNR 341
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNF 503
+ M KGC P+ +F+ LI G + + K++ T +G V + ++
Sbjct: 342 LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 401
Query: 504 LLTRI--VSDLDSGAGALDELL 523
L+ V DL++ L E++
Sbjct: 402 LIHGFCQVGDLNAAQDLLQEMV 423
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 160/320 (50%), Gaps = 13/320 (4%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S + +++++ + R D MF K P++ T N LI C+ V+ I++
Sbjct: 325 STITYSSMIDGFCKQNRLDAAEHMFYLMATK-GCSPDIITFNTLIAGYCRAKRVDDGIKL 383
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L EM G+V N +T+TT++ G+ GD+ A+ + +++ G P+ T L+DG
Sbjct: 384 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCD 443
Query: 268 LGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
G+L DA+++ M+ NGVEP+ TY ++I K EA L ++M
Sbjct: 444 NGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R VP + VI LC++ ++++A +++ + K+ P+ +T+I+ CK G++
Sbjct: 504 PHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 563
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ +LF E RG + + +TY TLI G + + A ++ +M+ GV P+ T +
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNM 623
Query: 436 IQGFCKIGNAKEGIRILEEM 455
+ G K + +LE++
Sbjct: 624 LTGLWSKEELKRAVAMLEDL 643
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 47/282 (16%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +FGD++ +P + LM +++GRL + + +ME V N ++ +
Sbjct: 59 LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ FC K A + + + + P+ ++ LC E ++ +A +L+ ++
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCE-------- 406
C P+ +T+++ LC+EG++ EA L D E G P+ +TY T++ GMC+
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234
Query: 407 ---------------------------------SAELTEAGRLWDDMVE-KGVEPNVFTY 432
S +EA +L +M+E K + P+V TY
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
N LI F K G E + +EML +G P+ ++S +I+G
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGF 336
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 145/360 (40%), Gaps = 63/360 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY S+I + DA E + + +P+I F T+I Y A R + +K
Sbjct: 328 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIIT----FNTLIAGYCRAKRVDDGIKL 383
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + + + + TL++ Q N DL+ M + V PNV TCN L+
Sbjct: 384 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG-----VCPNVVTCNTLL 438
Query: 193 KALCKKDDVEGAIRVLDEM-----------PSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
LC ++ A+ + M P G+ P++ T+ ++ G + G A+
Sbjct: 439 DGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 498
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ ++ RG VPD TY ++ G K RL +A ++ D M PN VT+ +I +C
Sbjct: 499 LYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 558
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K G+V+D EL+ + R+ + +
Sbjct: 559 KA-----------------------------------GRVDDGLELFCEMGRRGIVANAI 583
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
T+IH K G I A +F E G P +T ++ G+ EL A + +D+
Sbjct: 584 TYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 141/292 (48%), Gaps = 21/292 (7%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ R + +D +++ H + N TY ++IH + +A +
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTE--AGLVANTITYTTLIHGFCQVGDLNAAQ 416
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK----------FN- 144
LL E+ + P + L + N G+ + A++ F ++K FN
Sbjct: 417 DLLQEMVSSGVCPNVVTCNTLLDGLCDN----GKLKDALEMFKAMQKSKMDIDASHPFNG 472
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ V++ N L++ L+ ++ +++ H+ +VP+ T N +I LCK+ ++ A
Sbjct: 473 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
++ D M S PN+VT TT++ GY G +++ +F ++ RG V +A TY L+ G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+ K+G + A+ + EM +GV P+ +T M+ ++ A +L+D+
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ +Q LD A +F+ S + T++++I RA+ D
Sbjct: 324 PSTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPDIITFNTLIAGYCRAKRVDDGI 381
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
LL E+ + + + T+I + G A + V +V + NTLL+
Sbjct: 382 KLLHEMTE-AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 159 LVQNKRYDLVHLMFK---------NSRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVL 208
L N + MFK ++ H F V P+V T NILI L + A +
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EMP G+VP+ +T+ +++ G + ++ A ++F + + + P+ T+T L++GY K
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
GR+ D +++ EM G+ N +TY +I F K A ++ +M+ P +
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDT 617
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 205/399 (51%), Gaps = 11/399 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + ++HP+++H+ ++ I R R + V +L+ ++ I F
Sbjct: 95 ALQFFKHL-EYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRAR-RIGPSSKTFAI 152
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL-MFKNSRHK 178
+ + AG+P+ A+K FL + + + + S NT+L+ L ++KR ++ + +FK R K
Sbjct: 153 IAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGK 212
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
FK +V + NI+ C A+ VL EM G+ P + T+ +L GY G ++
Sbjct: 213 FKA--DVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKE 270
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A F + +R D TYT ++ G+ +G + A KV +EM G+ P+ TY MI+
Sbjct: 271 AWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQ 330
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
CK A + ++M+++ YVP+ VI L G ++ A E +R+ C P
Sbjct: 331 VLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEP 390
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMC---ESAELTEAGR 415
+ + I + C G + + +F++ +GS+P+L TYN LI+ M +S +L AG+
Sbjct: 391 NVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLPNLDTYNVLISAMFVRKKSEDLVVAGK 450
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGN---AKEGIRI 451
L +MV++G P FT+N ++ G GN AKE +R+
Sbjct: 451 LLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRL 489
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 160/318 (50%), Gaps = 14/318 (4%)
Query: 200 DVEGAIR-------VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
D+ G +R ++ M + + P+ T I +V G + A +VF + + G
Sbjct: 120 DIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCP 179
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
D ++ ++D K R+ A + ++ + + V+Y ++ +C K++ +A +
Sbjct: 180 QDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEV 239
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M++R P+ ++ G++++A E + ++ + D +T++H
Sbjct: 240 LKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGV 299
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G+I A+K+F+E G +PS TYN +I +C+ + A ++++MV+KG PN+ T
Sbjct: 300 VGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTT 359
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM-- 489
YN++I+G GN + + +E M GC PN ++++ I ++ G+V K +SM
Sbjct: 360 YNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDA---GDVEKGLSMFE 416
Query: 490 ATASGSVES-DSWNFLLT 506
GS+ + D++N L++
Sbjct: 417 KMGQGSLPNLDTYNVLIS 434
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L+ M R+ PSS + + GK + A +++ + C D +TI+ LC
Sbjct: 134 LVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILC 193
Query: 372 KEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K ++ A + RG + +++YN + G C +A + +MVE+G+ P +
Sbjct: 194 KSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTIT 253
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TYN+L++G+ + G KE +M ++ + +++ ++ G G KV +
Sbjct: 254 TYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEM 313
Query: 491 TASGSVESDSWNFLLTRIVSDLDSGAGAL 519
G + S + + +++ DS A+
Sbjct: 314 VGEGILPSTATYNAMIQVLCKKDSVENAV 342
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 232/461 (50%), Gaps = 17/461 (3%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPE 131
S ++ TY S+I L + + + L ++ +P++ + VI + R
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVY----TYTAVIHALCVENRLH 63
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K + N+ +V + L++ L + R D + S+ + K VP T N L
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALL--SKMRKKCVPTAVTYNSL 121
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LCK + A +L+EM G +P++ T+TT++ G+ ++A RVF ++ RG+
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY+ L+DG K GRL +A+ + M +G PN VTY +I FC+ K EA
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
NLL+ M + P +++ C+ +++DA +L ++ RK PD ++++ L
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+E ++ +A + E R S P++ TYNT++ G C + +L EA + + E PNV
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNV 359
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-S 488
++N++I+G CK+ + E + ++EE + C P+ ++ +I+GL E +V
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 489 MATASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKN 526
M G + S +++ L+T + + LD G +++ V N
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPN 460
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 217/454 (47%), Gaps = 61/454 (13%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL------FITVIRN 123
FHP+ TY ++IH L VE+ L E ++ E NL + +I
Sbjct: 42 FHPDVY----TYTAVIHALC-------VENRLHEARKFLEEMANRNLTPNVVTYTVLIDG 90
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKF 179
GR + AV ++ K V +V + N+L++ L + +R YDL+ M +
Sbjct: 91 LCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYSG---- 145
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+P++FT LI CK + A+RV +++ + G P++VT++ ++ G G ++ A
Sbjct: 146 -CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 240 KRVFGDILDRG-WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+FG ++ G +P+ TY L+ G+ ++G++ +A+ +++ M + G P+ VTY ++
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK + +A +LL+ M ++ P ++D LC E ++ DA + + RK+C P
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+TI+ C+ ++ EA+K E E P+++++N +I G+C+ +EA L +
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLE-EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD--------------------- 457
+ + P+V Y +I G C+ E R+ +ML+
Sbjct: 384 EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNA 443
Query: 458 -----------KGCFPNKTSFSLLIEGLYESGNE 480
KGC PN +++LLI+ ++ +
Sbjct: 444 GMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRD 477
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 15/385 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY+S+I L +A LL E+ + C ++F T+I + + + + A++ F
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYS---GCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + V + + L++ L + R +F +PN T N LI C+
Sbjct: 174 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A+ +L+ M G P++VT+TT++ G+ +++A + + +G PD T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T LMDG + RL+DAV ++ EM P TY +++ +C+ + EAR ML
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---ML 350
Query: 318 QRKYVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P + + + I LC+ + +A EL + R+ C PD + +T+I LC+E K+
Sbjct: 351 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 377 WEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EA +++ + E G +P+ +TY+TL+ G+C + L A +EKG PN+ TYN+
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNL 466
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKG 459
LI F K ++ +L++M+ +G
Sbjct: 467 LIDAFRKANRDEDARELLDDMVQRG 491
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 118/220 (53%)
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
N + VTY +I+ CK K+ +A L M+ + + P VI LC E ++ +
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG 403
A + + + +N P+ + +I LCK G++ EA L + + +P+ +TYN+LI+G
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C++ +EA L ++MV G P++FTY LI GFCK + + +R+ E+++ +G P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
++S LI+GL + G E + SGS ++ +
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 224
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
P + L+S R +D A+ + + S + TY ++++ + D
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAE--TGSSPDVVTYTTLMNGFCKLARLDDA 275
Query: 98 ESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
LL ++ + P++ +L + R L+ AV + + + +V + NT
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD----AVHILGEMRRKSCSPTVYTYNT 331
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L+ + + + K + PNV + NI+I+ LCK + A+ +++E
Sbjct: 332 ILDGYCRANQLEEAR---KFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTVLMDGYIKLGRLTD 273
P++V +TT++ G ++ A RV+ +L+ G +P++ TY+ L+ G G L
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDR 448
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
A +++ G PN TY ++I+AF K + +AR LLDDM+QR +
Sbjct: 449 ARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 219/425 (51%), Gaps = 9/425 (2%)
Query: 80 TYHSIIHKLARARAFD--AVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVK 135
+Y+S++ + R+R + E + E+ ++ + N++ +IR + G + +
Sbjct: 179 SYNSVLDAIVRSRGSVKLSAEEVYREMIRS---RVSPNVYTYNILIRGFCSVGELQKGLG 235
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F +E+ +V + NTL++A + R D + K+ K + PN+ + N++I L
Sbjct: 236 CFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYNVIINGL 294
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C++ ++ A +L+EM G P+ VT+ T+L GY G+ A + +++ G P
Sbjct: 295 CREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 354
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT L++ K L A++ D+M G+ PNE TY +I+ F + EA +L++
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + + PS I C ++E+A + + ++ K PD STII C++G+
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A ++ E E+G P +TY++LI G+CE LTEA L +M++ G+ P+ FTY
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI +C G+ + + + +EM+ KG P+ ++S+LI GL + E +++
Sbjct: 535 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594
Query: 495 SVESD 499
SV SD
Sbjct: 595 SVPSD 599
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 228/457 (49%), Gaps = 23/457 (5%)
Query: 40 QRLYPKRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
R P+ + + Q + L L+ +A + HP F + +H L R + + +
Sbjct: 53 SRFTPQSASYFLLKSQFDQTLTLKFLTWA-RNHPFFDSHCKCLS--LHILTRFKLYKTAQ 109
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRP----ELAVKTFLR-------IEKFNVQR 147
+L EL + G ++F + +Y + +L VK++ + N+ +
Sbjct: 110 TLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAK 169
Query: 148 S------VRSLNTLLNALVQNK-RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
S V S N++L+A+V+++ L + +V PNV+T NILI+ C +
Sbjct: 170 SSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGE 229
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ + EM G +PN+VT+ T++ Y G I+ A + + +G P+ +Y V
Sbjct: 230 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 289
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++G + G + +A ++++EM G P+EVTY ++ +CK +A + +M++
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
PS +I+ +C+ + A E + ++ + P+ +T+I ++G + EA
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
++ +E E G PS++TYN I G C + EA + +MVEKG+ P+V +Y+ +I GF
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
C+ G ++ +EM++KG P+ ++S LI+GL E
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 506
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 203/427 (47%), Gaps = 18/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+ II+ L R + +L E+ E + T++ Y G A+
Sbjct: 283 NLISYNVIINGLCREGSMKEAWEILEEMGYKG-FTPDEVTYNTLLNGYCKEGNFHQALVI 341
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + V SV + L+N++ + + + F R + + PN T LI
Sbjct: 342 HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFS 400
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + A R+L+EM G P++VT+ + G+ +E A V +++++G PD
Sbjct: 401 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 460
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y+ ++ G+ + G L A ++ EM + GV P+ VTY +I+ C+ ++ EA +L +M
Sbjct: 461 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 520
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L P +I+ C EG + A L ++ K +PD S +I+ L K+ +
Sbjct: 521 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 580
Query: 377 WEAKKL-FDEFERGSIPSLLTYNTLI---------------AGMCESAELTEAGRLWDDM 420
EAK+L F S+PS +TY+TLI G C + EA R+++ M
Sbjct: 581 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 640
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
VE+ +P YN++I G C+ GN + + +EM+ G P+ + LI+ L++ G
Sbjct: 641 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMN 700
Query: 481 GEVGKVV 487
E+ +V+
Sbjct: 701 EEMSEVI 707
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 168/323 (52%), Gaps = 18/323 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N I C + +E A+ V+ EM G+ P++V+++TI+ G+ +G+++ A ++
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++++G PDA TY+ L+ G ++ RLT+A + EM D G+ P+E TY +I A+C
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+A +L D+M+ + ++P + +I+ L ++ + +A L +L+ + +P +
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 601
Query: 363 SSTIIH---------------WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCE 406
T+I C +G + EA ++F+ ER P YN +I G C
Sbjct: 602 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCR 661
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
L +A L+ +M+ G P+ T LI+ K G +E ++ + L + C N+
Sbjct: 662 GGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL-RSCRLNEAE 720
Query: 467 FS-LLIEGLYESGNEGEVGKVVS 488
+ +L+E ++ GN V V++
Sbjct: 721 LAKVLVEINHKEGNMEAVLNVLT 743
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 158/385 (41%), Gaps = 64/385 (16%)
Query: 47 LVSMIFRQQNLDLALQIFHYAG--KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ + + +NL+ A++ F PN TY ++I +R + +L E+
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPN----ERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++ P + + I + + R E A+ + + + V S +T+++ +
Sbjct: 416 TESGFSPSVVT----YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 471
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
D M + K V P+ T + LI+ LC+ + A + EM MG+ P+
Sbjct: 472 KGELDRAFQMKQEMVEK-GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 530
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR----------- 270
T+TT++ Y GD+ A + +++ +G++PDA TY+VL++G K R
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590
Query: 271 ---------------------------------------LTDAVKVMDEMEDNGVEPNEV 291
+ +A +V + M + +P E
Sbjct: 591 IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 650
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y V+I C+G +A NL +M+ +VP + +I L +EG E+ E+
Sbjct: 651 VYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDT 710
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKI 376
LR + + ++ ++ KEG +
Sbjct: 711 LRSCRLNEAELAKVLVEINHKEGNM 735
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 147/379 (38%), Gaps = 69/379 (18%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHK---LARARAFDA 96
+R Y L+ RQ L+ A +I + + FS + TY++ IH L R
Sbjct: 389 ERTYTT-LIDGFSRQGLLNEAYRILNEMTE--SGFSPSVVTYNAFIHGHCVLERMEEALG 445
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
V + E P++ + T+I + G + A + + + V + ++L+
Sbjct: 446 VVQEMVEKGLAPDVVS----YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501
Query: 157 NALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
L + +R DL M + P+ FT LI A C + D+ A+ + DEM
Sbjct: 502 QGLCEMRRLTEACDLSQEMLD-----MGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 556
Query: 213 SMGMVPNLVTHTTILGG------------------------------------------- 229
G +P+ VT++ ++ G
Sbjct: 557 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKS 616
Query: 230 -------YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ +G + A RVF +++R P Y V++ G+ + G L A + EM
Sbjct: 617 VVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 676
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+G P+ VT +I+A K + E ++ D L+ + + L ++++ +EG +E
Sbjct: 677 HSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNME 736
Query: 343 DACELWKRLLRKNCMPDNA 361
+ + + +P++
Sbjct: 737 AVLNVLTDMAKDGLLPNSG 755
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 209/386 (54%), Gaps = 10/386 (2%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
GR A + R+ K V + NTLL+ + D +F + + VP+V
Sbjct: 23 GGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKR-GFVPDVV 81
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI CK D ++ A R+L M S +VP++VT+ +++ G G ++ A+ + I
Sbjct: 82 TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---I 138
Query: 247 LDRGWVPDATTYTVLMDGYIK-LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+D+G+ P+ TY+ L+ G + L +++A+K+ + G EP TY ++I+ K +
Sbjct: 139 VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDR 198
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L +++ P + ID LC+ G+VEDA + K + K C+PD +
Sbjct: 199 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 258
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ LCKE ++ EA+ L E +G P+ +++NTLI G C + + +A + +M+++G
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318
Query: 425 VEPNVFTYNMLIQGFCKI---GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
V+P V TYN+L+ G CK G KE I + + M++KG P+ ++S LI+GL ++G
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378
Query: 482 EVGKVVSMATASGSVES-DSWNFLLT 506
+ +++ A G + + ++N L++
Sbjct: 379 DARRLLGAMEAKGCIPNVYTYNSLIS 404
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 219/442 (49%), Gaps = 18/442 (4%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-A 96
WP R+ L+S + + A + Y +S + TY++++H + D A
Sbjct: 7 WPNRITYNALLSGLCNGGRMSDAQAL--YERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 97 VESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
++ +K+ P++ + +I + A + + A + R+ N+ V + N+
Sbjct: 65 LKIFDGAVKRGFVPDVVT----YNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK-DDVEGAIRVLDEMPS 213
L+N L +N R D ++ + PNV T + LI LC++ V A+++ +
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFS----PNVITYSTLISGLCRELRGVSEALKLFGSVLK 176
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P + T+ ++ G + + A +F ++ G PDA TYTV +DG K GR+ D
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ ++ +M++ G P+ V++ +I CK K+ EA LL M + P++ +I
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK---EGKIWEAKKLFDEF-ERG 389
C GK + A +K +L++ P + ++ LCK EG+I EA LFD E+G
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+P ++TY+ LI G+ ++ +L +A RL M KG PNV+TYN LI G C + E +
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416
Query: 450 RILEEMLDKGCFPNKTSFSLLI 471
+ M++KGC P+ ++ +I
Sbjct: 417 ELFVAMVEKGCVPDTITYGTII 438
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 179/344 (52%), Gaps = 6/344 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ N LL+ L R +++ K P+V T N L+ CK +++ A+++ D
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYER-MIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDG 70
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
G VP++VT+ ++ G+ ++ A+R+ ++ VPD TY L++G K GR
Sbjct: 71 AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGR 130
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS-GEARNLLDDMLQRKYVPSSALCC 329
+ +A ++ D G PN +TY +I C+ + EA L +L++ Y P
Sbjct: 131 VDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYN 187
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+ID L +E +V +A EL+ L++ PD + I LCK G++ +A + + E+
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +P ++++N +I G+C+ + EA L M KG PN ++N LI G C+ G K+
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+ +EML +G P ++++L++GL ++ EG + + +++ A
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 161/298 (54%), Gaps = 6/298 (2%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G PN +T+ +L G G + +A+ ++ ++ G+ PD TY L+ G+ K+G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L +A+K+ D G P+ VTY +I FCK K EA+ +L M+ VP
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK-IWEAKKLFDE-FER 388
+++ LC+ G+V++A L ++ K P+ ST+I LC+E + + EA KLF ++
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P + TYN LI G+ + + EA L+ +V+ G+EP+ TY + I G CK G ++
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
+ +L++M +KGC P+ S + +I GL + E ++S A G S + S+N L+
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 177/368 (48%), Gaps = 10/368 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ + LD A +I N + TY+S+++ L + D
Sbjct: 78 PDVVTYNALINGFCKADKLDEAQRILQRM--VSENLVPDVVTYNSLVNGLCKNGRVDEAR 135
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
L+ + +P + L + R L G E A+K F + K + V + N L++
Sbjct: 136 MLIVDKGFSPNVITYSTLISGLCRE--LRGVSE-ALKLFGSVLKQGYEPEVPTYNILIDG 192
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L++ R + +F + K + P+ T + I LCK VE A+ +L +M G VP
Sbjct: 193 LLKEDRVNEAFELF-SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 251
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++V+H ++ G ++ A+ + + +G P+A ++ L+ G + G+ A+
Sbjct: 252 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTF 311
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSG---EARNLLDDMLQRKYVPSSALCCKVIDLL 335
EM GV+P VTY ++++ CK ++ G EA L D M+++ VP +ID L
Sbjct: 312 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 371
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
+ GK++DA L + K C+P+ +++I LC K+ EA +LF E+G +P
Sbjct: 372 GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDT 431
Query: 395 LTYNTLIA 402
+TY T+I+
Sbjct: 432 ITYGTIIS 439
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + ++ ++ A ++F +G + TY I L +A VE L LK
Sbjct: 189 LIDGLLKEDRVNEAFELF--SGLVKHGLEPDAITYTVFIDGLCKA---GRVEDALLMLKD 243
Query: 107 NPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
E C ++ VI R + A +E + S NTL+ + +
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK---KDDVEGAIRVLDEMPSMGMVPNLV 221
+ FK K V P V T NIL+ LCK + ++ AI + D M G VP++V
Sbjct: 304 WKKAMTTFK-EMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 362
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T++ ++ G G +++A+R+ G + +G +P+ TY L+ G L ++ +A+++ M
Sbjct: 363 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAM 422
Query: 282 EDNGVEPNEVTYGVMIEA 299
+ G P+ +TYG +I A
Sbjct: 423 VEKGCVPDTITYGTIISA 440
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 196/400 (49%), Gaps = 38/400 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++H L +ARA D E+ L ++ N + + +I Y G+ + AV+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQM-VNKGVLPDNWTYNNLIYGYSSTGQWKEAVR---- 312
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+FK R + ++P+V N L+ +LCK
Sbjct: 313 -------------------------------VFKEMRRQ-SILPDVVALNTLMGSLCKYG 340
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G P++ ++T +L GY +G + + +F +L G PD T+
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFN 400
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+P+ VTY +I A C+ K +A + M+ +
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP +I C G + A EL ++ D +II+ LCK G++ +A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P + YN L+ G C ++ +A R++D MV G+EPNV Y L+ G
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CKIG EG+ + EML KG P+ ++++I+GL+E+G
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 182/365 (49%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ + LL + KR D + + + VP+VF
Sbjct: 126 AHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF 185
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ NIL+K+LC + A +L M G V P++V + T++ G+ GD+ A +F
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY+ ++ K + A + +M + GV P+ TY +I +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M ++ +P ++ LC+ GK+++A +++ + K PD +
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P + T+N LI L +A ++++M +
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+P+V TY +I C+IG + + +M+D+G P+K ++ LI+G G+ +
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 484 GKVVS 488
+++S
Sbjct: 486 KELIS 490
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 14/410 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ V + T++ AL + + D F N
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF-NQM 457
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
VVP+ + + LI+ C + A ++ E+ + GM ++V +I+ G +
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G PDA Y +LMDGY +G++ A++V D M G+EPN V YG +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQ+ PS+ L +ID L E G+ A + +
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
+ S ++ L K EA LF E ++ ++T NT+IAGM ++ + EA
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + G+ P TY+++I K G +E + M + GC P+ + ++ L
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS----DLDSGAGALDE 521
+ G +S + D NF L + + DL S G E
Sbjct: 758 KKNEIVRAGAYLS--------KIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ + + +++ FC+ K++ E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC +GK A +L + + C PD
Sbjct: 167 A---LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVA 223
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I KEG + +A LF E +RG P L+TY++++ +C++ + +A MV
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KGV P+ +TYN LI G+ G KE +R+ +EM + P+ + + L+ L + G
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 482 EVGKVV-SMATASGSVESDSWNFLL 505
E V +MA + + S+ +L
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIML 368
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 190/343 (55%), Gaps = 2/343 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R + + +I K ++ S+ + TLLN L + D V +++ + + + PNV+T
Sbjct: 112 RVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR-GLQPNVYTY 170
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N++I +L K A+ L +M +G VPN+V ++T++ GY RG ++ A+ VF ++
Sbjct: 171 NVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G P+ TYT LM+GY K+ R+ +AV+++DE G+ P+ VT+ +I C+ +
Sbjct: 231 KGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLA 290
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A+ L + + P+ ++D LC+ G +E+A L++ + R P+ I + +I
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILID 350
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK GKI + K+LF + G P++ TY L+ +C+ + EA +L+ M E G P
Sbjct: 351 SLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ YN++IQGF + + +++EEM+++G + + +LL
Sbjct: 411 DKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 175/331 (52%), Gaps = 2/331 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + L +++V+ Y+ V + K + ++ + +ILI C V+ + VL
Sbjct: 62 IVEFSKLFSSIVRMGHYETVVYLSKEIEF-LGIEQDIHSLSILINCFCHLHRVDFGLSVL 120
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
++ +G+ P++VT TT+L G G ++ ++ D+L RG P+ TY V+++ K
Sbjct: 121 SKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKS 180
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G+ +A+ + +ME G PN V Y +I+ +C + EAR++ D M+ + P+
Sbjct: 181 GKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTY 240
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
+++ C+ ++E+A +L LRK +PD +TII LC+ G+ A++LF
Sbjct: 241 TSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICA 300
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P+++TY L+ G+C+ L EA L+ +M V+PN+ Y +LI CK G K+
Sbjct: 301 HGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKD 360
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G + ++D+G PN +++ L+ L + G
Sbjct: 361 GKELFSRLIDEGLKPNVYTYTALVGALCKEG 391
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 180/362 (49%), Gaps = 6/362 (1%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF +++R G E V IE +++ + SL+ L+N R D L +
Sbjct: 68 LFSSIVR----MGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDF-GLSVLSK 122
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
K + P++ T L+ LC + ++ + + D+M G+ PN+ T+ I+ G
Sbjct: 123 ILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGK 182
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A + G VP+ Y+ L+DGY G++ +A V D M G PN TY
Sbjct: 183 ANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTS 242
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ +CK ++ EA LLD+ L++ VP +I LC G+ A +L++ +
Sbjct: 243 LMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHG 302
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P+ ++ LCK G + EA LF E +R ++ P+L+ Y LI +C+ ++ +
Sbjct: 303 HTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGK 362
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ ++++G++PNV+TY L+ CK G E ++ +M + GC P+K +++++I+G
Sbjct: 363 ELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGF 422
Query: 475 YE 476
+
Sbjct: 423 LQ 424
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K +P + + L ++ + E + + E+ +G+ ++ + + ++ + ++
Sbjct: 57 KPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFG 116
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
V IL G P T+T L++G G++ + + D+M G++PN TY V+I +
Sbjct: 117 LSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINS 176
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
K K+ EA L M + VP+ +ID C G++++A ++ ++ K C P+
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+++++ CK +I EA +L DE +G +P ++T+ T+I+G+C + A +L+
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G PN+ TY +L+ G CK GN +E + +EM PN +++LI+ L + G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
VW D ++A F +L R +P ++ L +++G V + E+E G+E +
Sbjct: 38 VWFKDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDI 97
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+ ++I FC + ++L +L+ PS +++ LC EGK++ L+
Sbjct: 98 HSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDD 157
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAE 409
+L + P+ + II+ L K GK EA + E+ G +P+++ Y+TLI G C +
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ EA ++D MV KG PNV+TY L+ G+CKI +E +++L+E L KG P+ +F+
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 470 LIEGLYESGNEGEVGKVVSMATASG 494
+I GL +G ++ A G
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHG 302
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
KDD + R+ M +P +V + + V G E + +I G D +
Sbjct: 43 KDDALASFRL---MLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHS 99
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
++L++ + L R+ + V+ ++ G+EP+ VT+ ++ C K + L DDML
Sbjct: 100 LSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDML 159
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R P+ +I+ L + GK +A K++ + C+P+ ST+I C G++
Sbjct: 160 VRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMD 219
Query: 378 EAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA+ +FD +G P++ TY +L+ G C+ + EA +L D+ + KG+ P++ T+ +I
Sbjct: 220 EARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTII 279
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G C+ G ++ + G PN ++ +L++GL + GN E
Sbjct: 280 SGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEE 325
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 41/224 (18%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N TY S+++ + + LL E + P+I F T+I AGRP A
Sbjct: 236 NVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT----FTTIISGLCRAGRPLAA 291
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF--------------------- 172
+ F I ++ + LL+ L ++ + +F
Sbjct: 292 QQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDS 351
Query: 173 -------KNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
K+ + F + PNV+T L+ ALCK+ + A ++ +M G P+
Sbjct: 352 LCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+ I+ G++ D A+++ ++++RG+ DA T +L D
Sbjct: 412 KCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 205/406 (50%), Gaps = 8/406 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +I + AG ++ ++ + V + NT+L A Q D F R
Sbjct: 27 YGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF---R 83
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K P FT ILI LC+ ++ A ++LDEM P+ + ++ G G I
Sbjct: 84 GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKI 143
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A+ V +L+R VPD TYT L+ G + L +A K+M++M+++G+ P+ V Y +
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ CK + E LL++M++ P + V+ LCE GK E+A ++ ++++ K C
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC 263
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD ++++ CK K+ EA++L D R P+++TY TLI G + L +A R
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR 323
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ +DM + G+ P++ TYN L+ G CK G +E +LE M++K C P+ ++S+L+ GL
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
+ G + ++ M G N + + D AG +DE
Sbjct: 384 KLGKVDDARLLLEMMLERGC----QPNLVTFNTMIDGFCKAGKVDE 425
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 205/398 (51%), Gaps = 13/398 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S++ + D E LL ++ +C + + T+I + A R A +
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGR---RCAPTVITYTTLIGGFSRADRLADAYRVM 325
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ K + + + N LL+ L + + + H + + K P+V T +IL+ LCK
Sbjct: 326 EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEK-DCAPDVVTYSILVNGLCK 384
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V+ A +L+ M G PNLVT T++ G+ G ++ +V + + PD T
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ L+DGY K R+ DA ++ G+ P++ +Y M+E C K EA+ ++D M
Sbjct: 445 YSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMT 498
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
++ P+S+ +I LC+ + ++A ++ + + + C P+ S +I+ LCK ++
Sbjct: 499 KQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE 558
Query: 378 EAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A + D E+G +P + TY +LI G C+ ++ A + + M + G EP+ YN+LI
Sbjct: 559 DAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILI 618
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
GFC+ GN ++ I +++ ML+KGC P+ ++ L+ L
Sbjct: 619 SGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 224/461 (48%), Gaps = 38/461 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+++++ L + + V LL E+ + P+ + TV+ +G+ E A K
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT----FSYNTVVACLCESGKYEEAGKI 254
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + V + N+L++ + + D + ++ + + P V T LI
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR-RCAPTVITYTTLIGGFS 313
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ D + A RV+++M G+ P+LVT+ +L G G +E A + ++++ PD
Sbjct: 314 RADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVV 373
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY++L++G KLG++ DA +++ M + G +PN VT+ MI+ FCK K E +L+ M
Sbjct: 374 TYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM 433
Query: 317 ------------------------LQRKYV-----PSSALCCKVIDLLCEEGKVEDACEL 347
+Q + P A +++ LC GKVE+A E+
Sbjct: 434 KEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEV 493
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCE 406
+ ++ C P ++ + II LC + EA K+ ERG P+L TY+ LI G+C+
Sbjct: 494 MDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCK 553
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + +A + D M+EKG P+V TY LI GFCKI + + M D GC P+K +
Sbjct: 554 TKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLA 613
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR 507
+++LI G +SGN + +V+ + G + F L R
Sbjct: 614 YNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMR 654
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 242/494 (48%), Gaps = 32/494 (6%)
Query: 47 LVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+ + + Q +D A Q+ HP+ + Y+ +I L + DA ++L +
Sbjct: 98 LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA----VYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ P++ +L + + L + A K ++++ + + N LLN L +
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNAL----DEARKLMEKMKESGLTPDTVAYNALLNGLCK 209
Query: 162 NKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ + L+ M + R P+ F+ N ++ LC+ E A ++L++M
Sbjct: 210 QNQLEEVSKLLEEMVEAGRE-----PDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCG 264
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++VT+ +++ G+ ++ A+R+ D++ R P TYT L+ G+ + RL DA +V
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
M++M G+ P+ VTY +++ CK K EA LL+ M+++ P +++ LC+
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
GKV+DA L + +L + C P+ +T+I CK GK+ E K+ + E P ++T
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+TLI G C +A R+ D G+ P+ +Y+ +++G C G +E +++ M
Sbjct: 445 YSTLIDGYC------KANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMT 498
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD--LD 513
+GC P + ++L+I GL + E K++ + + G + +++ L+ + ++
Sbjct: 499 KQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE 558
Query: 514 SGAGALDELLVKNC 527
LD +L K C
Sbjct: 559 DAINVLDVMLEKGC 572
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 179/390 (45%), Gaps = 28/390 (7%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF 74
LL+ + G RC+ + IT T L+ R L A ++ F
Sbjct: 289 LLEDMVGRRCAPTVITYTT-------------LIGGFSRADRLADAYRVME--DMFKAGI 333
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPEL 132
S + TY+ ++ L +A + LL + E C ++ I GL G+ +
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVM---VEKDCAPDVVTYSILVNGLCKLGKVDD 390
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + + Q ++ + NT+++ + + D H + + + + P+V T + LI
Sbjct: 391 ARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK-EVSCTPDVVTYSTLI 449
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK + ++ A +L G+ P+ +++++L G G +E A+ V + +G
Sbjct: 450 DGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCP 503
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P ++ Y +++ G + R +A+K++ M + G EPN TY ++I CK K+ +A N+
Sbjct: 504 PTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINV 563
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
LD ML++ VP A +ID C+ K++ A + +K + C PD + +I C+
Sbjct: 564 LDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQ 623
Query: 373 EGKIWEAKKLFD-EFERGSIPSLLTYNTLI 401
G + +A ++ E+G P TY +L+
Sbjct: 624 SGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 16/298 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY +++ L + D LL + E C NL F T+I + AG+ + K
Sbjct: 374 TYSILVNGLCKLGKVDDARLLLEMML---ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL 430
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ + V + +TL++ + R +++ + P+ + + +++ LC
Sbjct: 431 ELMKEVSCTPDVVTYSTLIDGYCKANR-------MQDAFAILGISPDKASYSSMLEGLCS 483
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY--VWRGDIENAKRVFGDILDRGWVPDA 255
VE A V+D M G P + I+GG V RGD A ++ + +RG P+
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGD--EALKMLQVMSERGCEPNL 541
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY++L++G K R+ DA+ V+D M + G P+ TY +I+ FCK K A
Sbjct: 542 YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKT 601
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M P +I C+ G VE A E+ + +L K C PD A +++ L E
Sbjct: 602 MRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 34/146 (23%)
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E F E F S PS TY LI G + + ++M+ + P+V T+N ++
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 437 QGFCKIGN---------------------------------AKEGIRILEEMLDKGCFPN 463
+ +C+IG+ E ++L+EM+ K C P+
Sbjct: 67 KAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPD 126
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSM 489
++ LI GL + G V+ M
Sbjct: 127 AAVYNCLIAGLCKMGKIDAARNVLKM 152
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 211/413 (51%), Gaps = 10/413 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL----FITVIRNYGLAGRPELAVK 135
+Y++I+ + R R + E I G +L + +IR + AG E+ ++
Sbjct: 169 SYNAILDSIVRCRK----PVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR 224
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F +E+ +V + NT++ A + KR D + + S + PN+ T N++I L
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLR-SMGLEGLEPNLLTYNMVINGL 283
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ +E VL EM G P+ VT+ T++ GY G+ A + ++L G PD
Sbjct: 284 CRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDV 343
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT L++ K G L A++ D+M G+ PN VTY +I F + EA + D+
Sbjct: 344 VTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDE 403
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++ + P+ +++ C G++E+A L + + K PD STII C+ +
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A ++ E E+G P +TY++LI G+CE L EA L+ +M+ K + P+ FTY
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
LI G+CK G+ E + + +EM+ KG P+ ++++LI GL + E +++
Sbjct: 524 LINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLL 576
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 173/320 (54%), Gaps = 16/320 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T LI +CK ++ A+ D+M G+ PN VT+T+++ G+ +G ++ A R+
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +++ G+ P TY L++G+ GR+ +A+ ++ ME G+ P+ V+Y +I FC+
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR 460
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ A + +M+++ P + +I LCE+ ++ +AC+L++ +L K+ +PD
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFT 520
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I+ CKEG + EA L DE ++G +P +TYN LI G+ + A EA RL +
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF 580
Query: 422 EKGVEPNVFTYNMLIQ---------------GFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
PN TY+ LI+ GFC G E ++ E M+ + PN+
Sbjct: 581 YDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAV 640
Query: 467 FSLLIEGLYESGNEGEVGKV 486
++++I G GN + K+
Sbjct: 641 YNVIIHGHCRDGNVHKAHKL 660
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 204/452 (45%), Gaps = 53/452 (11%)
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP----ELAVKT---- 136
+H L + + + ++L +L +N + G F + Y + +L VK+
Sbjct: 86 LHILTKFKLYKTAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYL 145
Query: 137 --------FLRIEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
+ + K N V S N +L+++V+ ++ + V NVF+
Sbjct: 146 NFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFS 205
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY-----------VWR--- 233
NILI+ C ++E +R +EM +PN+VT+ T++G Y + R
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265
Query: 234 ---------------------GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G IE V ++ +G+ PD TY L++GY K+G
Sbjct: 266 LEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFH 325
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A+ + EM NG+ P+ VTY +I CK A D M R P+ +I
Sbjct: 326 QALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLI 385
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSI 391
+ ++G +++A +W ++R P + +++ C G++ EA L E +G
Sbjct: 386 NGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLS 445
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P +++Y+T+IAG C EL A ++ +MVEKGV P+ TY+ LIQG C+ E +
Sbjct: 446 PDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDL 505
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+EML+K P++ +++ LI G + G+ E
Sbjct: 506 FQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 211/447 (47%), Gaps = 26/447 (5%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
F+ + TY+++++ + F L +E+ +N P++ +L T+ + AG
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK----AGNL 359
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS-RHKFKVVPNVFTCN 189
A++ F ++ ++ + + +L+N Q D + ++ R F P + T N
Sbjct: 360 NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFP--PTIVTYN 417
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L+ C +E AI +L M G+ P++V+++TI+ G+ +++ A ++ +++++
Sbjct: 418 ALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK 477
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PDA TY+ L+ G + RL +A + EM + + P+E TY +I +CK EA
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH- 368
NL D+M+++ ++P + +I+ L ++ + +A L +L +P+ T+I
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597
Query: 369 --------------WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
C +G + EA ++F+ +R P+ YN +I G C + +A
Sbjct: 598 CSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKA 657
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+L+ +MV+ G P+ T L++ G ++ ++ ++L + L++
Sbjct: 658 HKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQI 717
Query: 474 LYESGNEGEVGKVVSMATASGSVESDS 500
++ GN V +++ G + S +
Sbjct: 718 NHKEGNIDAVFNLLTEMAKDGFLPSGA 744
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 44/318 (13%)
Query: 186 FTCN-------ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV-WRGDIE 237
F CN +++K+ + +E A+ ++D G +P ++++ IL V R +
Sbjct: 126 FMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI 185
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A++V+ +++ G + +Y +L+ G+ G L ++ +EME N PN VTY +I
Sbjct: 186 FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVI 245
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
A+CK K+ +++A +L + + +
Sbjct: 246 GAYCKLKR-----------------------------------IDEAFKLLRSMGLEGLE 270
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRL 416
P+ + +I+ LC+ G+I E + E +R G P +TYNTL+ G C+ +A L
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVL 330
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+M+ G+ P+V TY LI CK GN + ++M +G PN +++ LI G +
Sbjct: 331 HSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQ 390
Query: 477 SGNEGEVGKVVSMATASG 494
G E ++ SG
Sbjct: 391 KGFMDEAYRIWDEMIRSG 408
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 209/409 (51%), Gaps = 13/409 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T + +++ L + FD V+S L+E++ N I + T+I Y G E A +
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNG-IYADMVTYNTLIGAYCREGLLEEAFEI 175
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD-----LVHLMFKNSRHKFKVVPNVFTCNIL 191
+ ++ S+ + N ++N L + RY L+ ++ + P+ T N L
Sbjct: 176 MNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML------NIGLSPDTTTYNTL 229
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ C++D+ A + EM G+VP+LV+ ++++ + ++ A F D+ G
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VPD YTVLM GY + G + +A+K+ DEM + G + + Y ++ CK K +A
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L D+M++R +P +I C++G + A L+ + ++N PD +T+I C
Sbjct: 350 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 409
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G++ +A +L+D R P+ +TY LI C ++EA RLWD M+EKG++P +
Sbjct: 410 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
T N +I+G+C+ G++ + L M+ KG P+ S++ LI G N
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 192/365 (52%), Gaps = 2/365 (0%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
ELA + + + ++ +V +LN ++NAL ++ ++D V F + + ++ T N
Sbjct: 100 ELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVK-SFLSEMEGNGIYADMVTYNT 158
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI A C++ +E A +++ M G+ P+L T+ I+ G +G AK + ++L+ G
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TTY L+ + ++A ++ EM GV P+ V++ +I F + + +A
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
DM + VP + + ++ C G + +A ++ +L + C+ D +TI++ L
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CKE + +A KLFDE ERG++P T+ TLI G C+ +T+A L+ M ++ ++P++
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
YN LI GFCK+G ++ + + M+ + FPN ++ +LI G+ E ++ +
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458
Query: 490 ATASG 494
G
Sbjct: 459 MIEKG 463
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 204/383 (53%), Gaps = 8/383 (2%)
Query: 134 VKTFL-RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--NSRHKFKVVPNVFTCNI 190
VK+FL +E + + + NTL+ A R L+ F+ NS + P++FT N
Sbjct: 137 VKSFLSEMEGNGIYADMVTYNTLIGAYC---REGLLEEAFEIMNSMADKGLKPSLFTYNA 193
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LCKK A +L EM ++G+ P+ T+ T+L R + AK +FG++L +G
Sbjct: 194 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 253
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
VPD +++ L+ + + L A+ +M+ G+ P+ V Y V++ +C+ EA
Sbjct: 254 VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 313
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ D+ML++ V +++ LC+E + DA +L+ ++ + +PD +T+IH
Sbjct: 314 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 373
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C++G + +A LF + +I P ++ YNTLI G C+ E+ +A LWD M+ + + PN
Sbjct: 374 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 433
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TY +LI +C +G+ E R+ + M++KG P + + +I+G SG+ + + +
Sbjct: 434 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 493
Query: 490 ATASG-SVESDSWNFLLTRIVSD 511
A G + + S+N L+ V +
Sbjct: 494 MIAKGVAPDHISYNTLINGFVRE 516
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 208/408 (50%), Gaps = 11/408 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II+ L + + + +L E+ +P+ L + R + E+
Sbjct: 190 TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI---- 245
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + V + S ++L+ +N+ D + F++ + KF +VP+ +L+ C
Sbjct: 246 FGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK-KFGLVPDNVIYTVLMHGYC 304
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++ A+++ DEM G V +++ + TIL G + +A ++F ++++RG +PD
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ G+ + G +T A+ + M ++P+ V Y +I+ FCK + +A L D M
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ RK P+ +I+ C G V +A LW ++ K P +T+I C+ G
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 484
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK-GVEPNVFTYNM 434
+A + +G P ++YNTLI G + +A LW + +EK G+ P++ TYN+
Sbjct: 485 SKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKA-FLWINKMEKEGLLPDIITYNV 543
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
++ GFC+ G +E +L +M++KG P++++++ LI G N E
Sbjct: 544 VMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNE 591
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 189/394 (47%), Gaps = 9/394 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTE-LKQN--PEIKCGENLFITVIRNYGLAGRP 130
S + TY++++ + R F + + E L+Q P++ +L RN L
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHL---- 274
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A+ F ++KF + L++ +N L L ++ + V +V N
Sbjct: 275 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM-LEALKIRDEMLEQGCVLDVIAYNT 333
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ LCK+ + A ++ DEM G +P+ T TT++ G+ G++ A +FG + R
Sbjct: 334 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 393
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD Y L+DG+ K+G + A ++ D M + PN +TYG++I A+C EA
Sbjct: 394 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 453
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L D M+++ P+ C VI C G A E R++ K PD+ +T+I+
Sbjct: 454 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGF 513
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+E + +A ++ E+ G +P ++TYN ++ G C + EA + M+EKG+ P+
Sbjct: 514 VREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDR 573
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
TY LI G N E R +EML +G P+
Sbjct: 574 STYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 187/424 (44%), Gaps = 82/424 (19%)
Query: 95 DAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+ VE+L++ + N CG N +F +IR Y A + + F + S+ +
Sbjct: 31 EVVEALVSSMCGN----CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINAC 86
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFK--VVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
N+LL LV + D V L ++ R + + NV+T NI++ ALCK + L E
Sbjct: 87 NSLLGGLV---KIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSE 143
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+ ++V TY L+ Y + G
Sbjct: 144 MEGNGIYADMV-----------------------------------TYNTLIGAYCREGL 168
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L +A ++M+ M D G++P+ TY +I CK + A+ +L +ML P +
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNC---------------------------------- 356
++ C +A E++ +LR+
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288
Query: 357 -MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+PDN I + ++H C+ G + EA K+ DE E+G + ++ YNT++ G+C+ LT+A
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+L+D+MVE+G P+ +T+ LI G C+ GN + + + M + P+ +++ LI+G
Sbjct: 349 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF 408
Query: 475 YESG 478
+ G
Sbjct: 409 CKVG 412
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y++I++ L + + + L E+ + P+ F T+I + G A+
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT----FTTLIHGHCQDGNMTKALSL 385
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + N++ + + NTL++ + + ++ + K+ PN T ILI A C
Sbjct: 386 FGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR-KIFPNHITYGILINAYC 444
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
V A R+ D M G+ P LVT T++ GY GD A G ++ +G PD
Sbjct: 445 SVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 504
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y L++G+++ + A +++ME G+ P+ +TY V++ FC+ + EA +L M
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+++ P + +I+ + + +A +L++ PD+
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 23/191 (12%)
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
M+ F + ++ +A+ L+ M++R V + ++ +C N
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMC-----------------GN 43
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
C +N + +I + K+ E + F +G + S+ N+L+ G+ + + A
Sbjct: 44 CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI--- 471
+ ++V G+E NV+T N+++ CK G + L EM G + + +++ LI
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 472 --EGLYESGNE 480
EGL E E
Sbjct: 164 CREGLLEEAFE 174
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 183/361 (50%), Gaps = 21/361 (5%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S N LL ++ + K + + L + F + PN++T +ILI
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTL-LSLSHQMDSFGIPPNIYTLHILI 103
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + V A VL ++ +G P+ T TT++ G G I A +F ++ G+
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFR 163
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L++G K+G + A++++ M +PN Y +I++ CK ++ EA NL
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P +I LC + + L ++ MPD +T++ LCK
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK+ EA + D+ +RG P+++TY L+ G C +E+ EA +++D MV KG PNV +
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343
Query: 432 YNMLIQGFCKIG-------------------NAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
YN LI G+CKI N E +++ + M+ KGC PN S++ LI
Sbjct: 344 YNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLIN 403
Query: 473 G 473
G
Sbjct: 404 G 404
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 226/470 (48%), Gaps = 27/470 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY ++I+ L + A LL + Q C N+F T+I + + A F
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQK---NCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + + + N+L++AL + V + N K++P+V + N ++ ALCK
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLL-NEMVDSKIMPDVVSFNTVVDALCK 283
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ V A V+D+M G+ PN+VT+T ++ G+ +++ A +VF ++ +G +P+ +
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343
Query: 258 YTVLMDGYIKLGR-------------------LTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
Y L++GY K+ R + +AVKV D M G PN ++Y +I
Sbjct: 344 YNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLIN 403
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK ++ +A L +M +++ +P + +I LC +++DA L+ ++ + +P
Sbjct: 404 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 463
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
+ ++ +LCK + EA L E ++ P + N I GMC + EL A L+
Sbjct: 464 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 523
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG++P+V+TY+++I G C+ G E ++ EM + GC N ++ + G +
Sbjct: 524 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 583
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
+++ A G S L +++SD D +L ++L C
Sbjct: 584 NETSRAIQLLQEMVARGFSADASTMTLFVKMLSD-DGLDQSLKQILRNGC 632
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 6/297 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I+ A F +L P + L+ K+ + + + +M+ G+ PN T +
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + G A ++L +L+ + P +A +I +C EGK+ +A L+ +++ +
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD T+I+ LCK G A +L ++ P++ YNT+I +C+ ++TEA
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ +MV KG+ P++FTYN LI C + K +L EM+D P+ SF+ +++ L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTR----IVSDLDSGAGALDELLVKNC 527
+ G E VV G VE + + ++S++D D ++ K C
Sbjct: 282 CKEGKVTEAHDVVDKMIQRG-VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AVK F + +V S NTL+N + +R D +F + +++P+ T + LI
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ-ELIPDTVTYSTLI 437
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG------------------------ 228
LC + ++ AI + EM + +PNLVT+ +L
Sbjct: 438 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD 497
Query: 229 -----------GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
G G++E A+ +F ++ +G PD TY+++++G + G L +A K+
Sbjct: 498 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 557
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
EM++NG N Y + F + ++ A LL +M+ R + ++ + +L +
Sbjct: 558 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 617
Query: 338 EGKVEDACELWKRLLRKNC---MPDNAISSTIIHWLCK 372
+G + K++LR C ++ SST +H L K
Sbjct: 618 DGLDQS----LKQILRNGCKWISTFDSSSSTGLHILQK 651
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 215/426 (50%), Gaps = 8/426 (1%)
Query: 39 PQR-LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN--FSHNYDTYHSIIHKLARARAFD 95
P R + P RL S++ Q++ LALQ+F P+ F ++ +Y II KL RA+ F+
Sbjct: 3 PSRPITPFRLASLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFN 62
Query: 96 AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
++ +L +LK+ E LF +I YG A PE A+K + + F VQR+V+S N+L
Sbjct: 63 EMQEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSL 122
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L+ + K +D + +F K + T N+LI+ C ++ A +V DEM + G
Sbjct: 123 LSVFLMCKDFDKMRELFVGIEKLGKA--DACTYNLLIRGFCASGRLDDASKVFDEMTNRG 180
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDA 274
+ PN++T ++ G+ ++ A ++ D++ V P+A Y L+ G K G L+ A
Sbjct: 181 VSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLA 240
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ EM N +E + Y +I K + EA + +DM +R Y P + +I+L
Sbjct: 241 FRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINL 300
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
C++ E A L ++ K C PD + I+ L +EGK EA LF++ RG P
Sbjct: 301 FCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPD 360
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+++Y L G C + EA + D+M+ KG P + + C+ G ++ +R
Sbjct: 361 VVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCE-GKNEDLLRSAF 419
Query: 454 EMLDKG 459
L+KG
Sbjct: 420 NTLEKG 425
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 168/361 (46%), Gaps = 40/361 (11%)
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
E A+++L E+PS + + ++ ++L ++ D + + +F I G DA TY +L
Sbjct: 98 ENALKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEKLGKA-DACTYNLL 156
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-RK 320
+ G+ GRL DA KV DEM + GV PN +T+G +I FC + EA L DM++ +
Sbjct: 157 IRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYR 216
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P++ + +I +C+ G++ A L K ++R D AI ST+I L K G+ EA
Sbjct: 217 VYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEAL 276
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN------ 433
++++ ERG P +TYN +I C+ + A RL D+MVEKG +P+V +YN
Sbjct: 277 GVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILREL 336
Query: 434 -----------------------------MLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
+L GFC KE IL+EM+ KG P
Sbjct: 337 FEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCS 396
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDEL 522
S + L E NE + + V D W + + D L S +D L
Sbjct: 397 ASICKFVNRLCEGKNEDLLRSAFNTLEKGKLVNVDLWRMAVAMVFKDDKLSSSFNLVDSL 456
Query: 523 L 523
+
Sbjct: 457 I 457
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 166/355 (46%), Gaps = 8/355 (2%)
Query: 72 PNF--SHNYDTYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAG 128
P+F +Y+S++ + FD + L + K C NL +IR + +G
Sbjct: 108 PSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEKLGKADACTYNL---LIRGFCASG 164
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R + A K F + V +V + L+ + R + + ++V PN +
Sbjct: 165 RLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIY 224
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LIK +CK ++ A R+ EM + + ++T++ G G E A V+ D+ +
Sbjct: 225 ASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKE 284
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG+ PD TY V+++ + K A +++DEM + G +P+ ++Y V++ + K GE
Sbjct: 285 RGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGE 344
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L +DM +R P + D C + ++A + ++ K +P +A ++
Sbjct: 345 ANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVN 404
Query: 369 WLCKEGKIWE-AKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
LC EGK + + F+ E+G + ++ + +A + + +L+ + L D +++
Sbjct: 405 RLC-EGKNEDLLRSAFNTLEKGKLVNVDLWRMAVAMVFKDDKLSSSFNLVDSLID 458
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 220/445 (49%), Gaps = 23/445 (5%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE---N 115
LAL+ F +AG F H ++Y I+H + RAR + + E+ N + G N
Sbjct: 86 LALKFFKWAGS-QVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCN 144
Query: 116 LF--ITVIRNYGLAGRP---------------ELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+F + RN ++G E A + F R+ F RS N LL+
Sbjct: 145 IFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 204
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L ++ LV F N + P+VFT N++I LCK+ D+E + R+ +M MG+ P
Sbjct: 205 LSKSGNGQLVRKFF-NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSP 263
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++VT+ +++ GY G +E +F ++ D G VPD TY L++ Y K ++ A +
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM++NG++PN VTY +I+AFCK A LL DM + +P+ +ID C+
Sbjct: 324 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKA 383
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
G + +A +L +L+ + + ++ LCK G++ EA+++F + I P+ Y
Sbjct: 384 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY 443
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
L+ G ++ + +A ++ M E ++P++ Y +I G C +E ILEEM
Sbjct: 444 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 503
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGE 482
+G N + +I+ +++G +
Sbjct: 504 RGISANPVISTTIIDAYFKAGKSSD 528
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 205/441 (46%), Gaps = 42/441 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I + + + V SL E+K ++ C ++ + +I Y + A + F
Sbjct: 267 TYNSLIDGYGKVGSLEEVASLFNEMK---DVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ ++ +V + +TL++A + + + R + ++PN FT LI A CK
Sbjct: 324 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR-RTGLLPNEFTYTSLIDANCK 382
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A ++L++M G+ N+VT+T +L G G + A+ VF +L G P+
Sbjct: 383 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 442
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG----------------------- 294
YT L+ GYIK R+ DA+K++ +M + ++P+ + YG
Sbjct: 443 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 502
Query: 295 ------------VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+I+A+ K KS +A N +M + C +ID LCE G VE
Sbjct: 503 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVE 562
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLI 401
A + + R+L P+ A+ +++I LC I AKKLFDE + RG P + + LI
Sbjct: 563 LAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALI 622
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + L EA L M E +E ++ Y L+ GF + G + + EM++KG
Sbjct: 623 DGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 682
Query: 462 PNKTSFSLLIEGLYESGNEGE 482
P + L+ Y+ G E
Sbjct: 683 PEEVLCICLLREYYKRGQLDE 703
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 203/416 (48%), Gaps = 9/416 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I L + + L ++++ +P++ + ++I YG G E
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVT----YNSLIDGYGKVGSLEEVASL 287
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + + N L+N + ++ F ++ + PNV T + LI A C
Sbjct: 288 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN-GLKPNVVTYSTLIDAFC 346
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++GAI++L +M G++PN T+T+++ G++ A ++ D+L G +
Sbjct: 347 KEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 406
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+DG K GR+ +A +V M +G+ PN+ Y ++ + K ++ +A +L M
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P L +I C + K+E+ + + + + + IS+TII K GK
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A F E + G +++TY LI G+CE+ + A + M+ G++PNV Y L
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
I G C + ++ +EM +G P+ T+F+ LI+G + GN E ++S T
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMT 642
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 245 DILDRGW------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+I D W V + + VL +++LG L +A + M + P + ++
Sbjct: 144 NIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLH 203
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K R +DM+ PS +ID LC+EG +E++ L+ ++ P
Sbjct: 204 RLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSP 263
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I K G + E LF+E + G +P ++TYN LI C+ ++ A +
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+M G++PNV TY+ LI FCK G + I++L +M G PN+ +++ LI+ ++
Sbjct: 324 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKA 383
Query: 478 GNEGEVGKVVSMATASG 494
GN E K+++ +G
Sbjct: 384 GNLTEAWKLLNDMLQAG 400
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 38/297 (12%)
Query: 75 SHNYDTYHSIIHKLARA-RAFDAVESL--LTELKQNPEI---------KCGE------NL 116
S N Y +++H +A R DA++ L +TE P++ C + L
Sbjct: 437 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 496
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +++ G++ P + T + F +S +LN F
Sbjct: 497 ILEEMKSRGISANP--VISTTIIDAYFKAGKSSDALN------------------FFQEM 536
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V + T +LI LC+ VE A+ M S+G+ PN+ +T+++ G I
Sbjct: 537 QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCI 596
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E+AK++F ++ RG PD T +T L+DG +K G L +A+ ++ M + +E + Y +
Sbjct: 597 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 656
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+ F + + +AR ++M+++ +P LC ++ + G++++A EL + R
Sbjct: 657 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 713
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 150/345 (43%), Gaps = 3/345 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I +A LL ++ Q +K + ++ AGR A +
Sbjct: 369 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQ-AGVKLNIVTYTALLDGLCKAGRMIEAEEV 427
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + K + + + L++ ++ +R + + K + + P++ +I C
Sbjct: 428 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT-ECNIKPDLILYGSIIWGHC 486
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E +L+EM S G+ N V TTI+ Y G +A F ++ D G
Sbjct: 487 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 546
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY VL+DG + G + AV M G++PN Y +I+ C A+ L D+M
Sbjct: 547 TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM 606
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R P +ID + G +++A L R+ D + ++++ + G++
Sbjct: 607 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 666
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+A+K F+E E+G +P + L+ + +L EA L ++M
Sbjct: 667 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 2/241 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y SII R + + +L E+K I + T+I Y AG+ A+ F +
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRG-ISANPVISTTIIDAYFKAGKSSDALNFFQEM 536
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V+ ++ + L++ L + +L F + PNV LI LC +
Sbjct: 537 QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRML-SLGLQPNVAVYTSLIDGLCXNNC 595
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A ++ DEM GM P++ T ++ G + G+++ A + + + D YT
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ + G L A K +EM + G+ P EV ++ + K + EA L ++M +
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715
Query: 321 Y 321
Y
Sbjct: 716 Y 716
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 92/213 (43%), Gaps = 15/213 (7%)
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G +Y +++ + + +A + + +++ + C + D+L
Sbjct: 99 GFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDML--------- 149
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
W R C+ + + + + G + EA + F ++P + N L+
Sbjct: 150 ---WST--RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 204
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ +S + ++DM+ G+ P+VFTYN++I CK G+ + R+ +M + G P+
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 264
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+++ LI+G + G+ EV + + G V
Sbjct: 265 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCV 297
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 211/433 (48%), Gaps = 9/433 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY+ +IH L + F +E LK + C N F +I Y A+
Sbjct: 367 NLITYNVLIHGLCK---FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRAL 423
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIK 193
+ +EK N+ S S ++N L K L + L+ K + K PNV +ILI
Sbjct: 424 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK--PNVVVYSILIM 481
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
A + +E A R+LD M G+ P++ + I+ G +E A +I RG P
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 541
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
DA T+ + GY K G++T+A K DEM D+G+ PN Y V+I K EA ++
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ +P C I L + G+V++A +++ L K +PD S++I CK+
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ +A +L DE +G P++ YN L+ G+C+S ++ A +L+D M EKG+EP+ TY
Sbjct: 662 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 721
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+ +I G+CK N E + EM KG P+ ++ L+ G + G+ + +
Sbjct: 722 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781
Query: 493 SGSVESDSWNFLL 505
G + S+N L+
Sbjct: 782 KGFATTLSFNTLI 794
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 203/417 (48%), Gaps = 38/417 (9%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L+ +I + AG A+ F R+ V V++ + ++ L++N R +F
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ K +VP+VFT + LI CK+ +VE A + DEM G+ PN+ + ++ G GD
Sbjct: 640 KEK-GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 698
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I+ A+++F + ++G PD+ TY+ ++DGY K + +A + EM GV+P+ Y
Sbjct: 699 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 758
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ CK +A NL +MLQ+ + + + +ID C+ K+++A +L++ ++ K
Sbjct: 759 LVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQEASQLFQEMIAKQ 817
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE---------------------------- 387
MPD+ +T+I W CK GK+ EA LF E +
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877
Query: 388 --------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+G P +TY +I C+ L EA +L D++V KG+ +++LI
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK + E ++L+EM + G P+ + + L+ +E+G E +V + G V
Sbjct: 938 CKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 45/446 (10%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++II L++A + + L E+ Q +K F I Y G+ A K F +
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 569
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS----RHKFKVVPNVFTCNILIKALC 196
+ + N L L+ N + +LM S H V+P+V TC+ I L
Sbjct: 570 ----LDHGLMPNNPLYTVLI-NGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V+ A++V E+ G+VP++ T+++++ G+ +G++E A + ++ +G P+
Sbjct: 625 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+DG K G + A K+ D M + G+EP+ VTY MI+ +CK + EA +L +M
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744
Query: 317 LQRKYVPSSAL-------CCK---------------------------VIDLLCEEGKVE 342
+ P S + CCK +ID C+ K++
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ 804
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
+A +L++ ++ K MPD+ +T+I W CK GK+ EA LF E ER I +TY +L+
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + + +E L++ MV KGV+P+ TY ++I CK N E ++ +E++ KG
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVV 487
T LLI L + + E K++
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLL 950
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 162/314 (51%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++PN +LI K ++ A+ + + ++G++P++ T + + G + G ++ A
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+VF ++ ++G VPD TY+ L+ G+ K G + A ++ DEM G+ PN Y +++
Sbjct: 634 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK AR L D M ++ P S +ID C+ V +A L+ + K P +
Sbjct: 694 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 753
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + ++H CKEG + +A LF E + + L++NTLI G C+S ++ EA +L+ +M
Sbjct: 754 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEM 813
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ K + P+ TY +I CK G +E + +EM ++ + +++ L+ G + G
Sbjct: 814 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQS 873
Query: 481 GEVGKVVSMATASG 494
EV + A G
Sbjct: 874 SEVFALFEKMVAKG 887
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 159/309 (51%), Gaps = 1/309 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K S + +VPN +T I+ LC+ + A +EM G+ P+ + ++ G++
Sbjct: 285 LKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFM 344
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
GDI+ R+ ++ G + TY VL+ G K G++ A +++ M G +PN
Sbjct: 345 REGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSR 404
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T+ ++IE +C+ G A LLD+M +R VPS+ +I+ LC + A +L +++
Sbjct: 405 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAEL 410
P+ + S +I EG+I EA++L D G P + YN +I+ + ++ ++
Sbjct: 465 TFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 524
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA ++ +G++P+ T+ I G+ K G E + +EMLD G PN +++L
Sbjct: 525 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 584
Query: 471 IEGLYESGN 479
I G +++GN
Sbjct: 585 INGHFKAGN 593
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 220/494 (44%), Gaps = 72/494 (14%)
Query: 28 TITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLA-LQIFHYAGKFHPNFSHNYDTYHSIIH 86
TI V+ I P +L P + +++ + Q D L F Y + D++ +
Sbjct: 58 TIMVSSHI---PSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAV 114
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVI---RNYGLAGRP---ELAVKTFLRI 140
+L + F +LT++ + P ++ +V+ RNYG P ++ + ++ R+
Sbjct: 115 QLCNSELFGLANGVLTQMIRTP--YSSSSILDSVLFWFRNYG-GSSPVVFDILIDSYKRM 171
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ +V + KN ++ ++ CN L+K L K
Sbjct: 172 GMLDEAANV-------------------FFVAKND----SILISLIRCNSLLKDLLKCGM 208
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E +V + M M ++ T+T ++G GD+ AKRV ++ ++G P+ Y++
Sbjct: 209 MELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSL 268
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++G ++G + +AV++ M + G+ PN TY ++ C+ K+ EA+ ++M +
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328
Query: 321 YVPSSALCCKVID-----------------------------------LLCEEGKVEDAC 345
P C +ID LC+ GK+E A
Sbjct: 329 LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAA 388
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGM 404
E+ K ++ C P++ +I C+E + A +L DE E R +PS ++Y +I G+
Sbjct: 389 EILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL 448
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C +L+ A +L + M G++PNV Y++LI + G +E R+L+ M G P+
Sbjct: 449 CHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDI 508
Query: 465 TSFSLLIEGLYESG 478
++ +I L ++G
Sbjct: 509 FCYNAIISCLSKAG 522
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 3/313 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P VF +ILI + + ++ A V + ++ +L+ ++L + G +E +V
Sbjct: 158 PVVF--DILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKV 215
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +LD D TYT L+ K G L A +V+ EM++ G+ PNE Y ++IE C+
Sbjct: 216 YNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQ 275
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
EA L M ++ VP++ + LC ++ +A ++ + + PD
Sbjct: 276 VGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNA 335
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I +EG I E ++ D IP +L+TYN LI G+C+ ++ +A + MV
Sbjct: 336 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMV 395
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G +PN T+ +LI+G+C+ N + +L+EM + P+ S+ +I GL +
Sbjct: 396 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 455
Query: 482 EVGKVVSMATASG 494
K++ T SG
Sbjct: 456 LANKLLEKMTFSG 468
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 2/259 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P+ F N L+ CK+ D+E A+ + EM G L + T++ GY I+ A
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEAS 807
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F +++ + +PD TYT ++D + K G++ +A + EM++ + + VTY ++ +
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 867
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K +S E L + M+ + P VI C+E + +A +L ++ K +
Sbjct: 868 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 927
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
I +I LCK + EA KL DE E G PSL NTL+ E+ ++ EA R+++
Sbjct: 928 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEG 987
Query: 420 MVEKGVEPNVFTYNMLIQG 438
+ G+ P+ T L+ G
Sbjct: 988 VKSLGLVPDTTTLIDLVNG 1006
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 197/400 (49%), Gaps = 38/400 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S++H L +ARA D E+ L ++ N + + +I Y G+ + AV+ F
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQM-VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ RH ++P+V T ++L+ +LCK
Sbjct: 315 MR----------------------------------RHS--ILPDVVTLSMLMGSLCKYG 338
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G P++ ++ +L GY +G + + +F +L G PD T+
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 398
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+P+ VTY +I A C+ K +A + M+ +
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I C G + A EL ++ D S+II+ LCK G++ +A
Sbjct: 459 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P + Y+ L+ G C ++ +A R++D MV G+EPNV Y L+ G
Sbjct: 519 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CKIG EG+ + EML +G P+ +S++I+GL+++G
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ ++ N LL + KR D + + + VP+VF
Sbjct: 124 AHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVF 183
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ +IL+K+LC + A +L M G V PN+V + T++ G+ GD+ A +F
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY ++ K + A + +M + V PN TY +I +
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 303
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M + +P ++ LC+ GK+++A +++ + K PD +
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P T+N LI L +A ++++M +
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+P+V TY +I C+IG + + +M+D+G P+K +++ LI+G G+ +
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 483
Query: 484 GKVVS 488
+++S
Sbjct: 484 KELIS 488
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 189/410 (46%), Gaps = 14/410 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ V + T++ AL + + D F N
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF-NQM 455
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V P+ + N LI+ C + A ++ E+ + GM ++V ++I+ G +
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G PDA Y++LMDGY +G++ A++V D M G+EPN V Y +
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 575
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQR PS+ L +ID L + G+ A + +
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
D + ++ L K EA LF E ++ +++T NT+I GM ++ + EA
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 695
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + + P+V TY+++I K G +E + M + GC PN + ++ L
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 755
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNF----LLTRIVSDLDSGAGALDE 521
+ G +S + D NF L T ++ DL S G E
Sbjct: 756 KKNEIVRAGAYLS--------KIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 11/265 (4%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ N + ++E FC+ K++ E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC++GK A +L + + C P+
Sbjct: 165 A---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 221
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I KEG + +A LF E +RG P L+TYN+++ +C++ + +A MV
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
K V PN +TYN LI G+ G KE +R+ +EM P+ + S+L+ L + G
Sbjct: 282 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341
Query: 482 EVGKVV-SMATASGSVESDSWNFLL 505
E V +MA + + S+N +L
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIML 366
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 14/274 (5%)
Query: 70 FHPN---FSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
HP+ +S D Y ++ K+ +A R FDA+ S ++ N + C T++ Y
Sbjct: 530 LHPDAVVYSMLMDGY-CLVGKMEKALRVFDAMVS--AGIEPNVVVYC------TLVNGYC 580
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
GR + + F + + ++ S + +++ L Q R + F + ++
Sbjct: 581 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTES-GIAMDI 639
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T NI+++ L K + AI + E+ +M + N++T T++ G +E AK +F
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 699
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
I VP TY++++ IK G + +A + M++ G EPN ++ K +
Sbjct: 700 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 759
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
A L + +R + ++DL +G
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F + NV+ ++ +LNT+++ + Q +R + +F S + ++VP+V T +I+I
Sbjct: 658 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFA-SISRSRLVPSVVTYSIMI 716
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
L K+ VE A + M + G PN ++ + + +I A I +R +
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVM 278
+ T +L+D + G + ++ +
Sbjct: 777 LEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 238/495 (48%), Gaps = 45/495 (9%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
++ P +L ++ ++ ++++F + G + H++D Y +I KL F ++
Sbjct: 68 HKITPFQLCKLLELPLDVSTSMELFSWTGS-QKGYRHSFDVYQVLIGKLGSNGEFKTIDR 126
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNA 158
LL ++K + I E+LFI+++R+Y AG P + L + ++ + + +S N +L
Sbjct: 127 LLMQMK-DEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 185
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
LV + + +F + + K+ P +FT +++KALC ++V+ A+ VL +M G VP
Sbjct: 186 LVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVP 244
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N V + T++ + A ++ ++ G VPDA T+ ++ G K R+ +A K++
Sbjct: 245 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 304
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI------ 332
+ M G P+++TYG ++ CK + A+ D+ R P+S + +I
Sbjct: 305 NRMLIRGFTPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPTSVIFNTLIHGFVTH 360
Query: 333 -----------DLLCEEGKVEDACE-------LWKRLL------------RKNCMPDNAI 362
D++ G V D C WK+ L K C P+
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++ CK GKI EA L +E G P+ + +N LI+ C+ + EA ++ +M
Sbjct: 421 YTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 480
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KG +P+V+T+N LI G C++ K + +L +M+ +G N +++ LI G
Sbjct: 481 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 540
Query: 482 EVGKVVSMATASGSV 496
E K+V+ GS+
Sbjct: 541 EARKLVNEMVFQGSL 555
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 204/404 (50%), Gaps = 8/404 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++IH L++ + LL E+ + E F VI R A K
Sbjct: 245 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET-FNDVILGLCKFDRINEAAKM 303
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ + L+N L + R D +F P N LI
Sbjct: 304 VNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PTSVIFNTLIHGFV 358
Query: 197 KKDDVEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
++ A VL +M S G+VP++ T+ +++ GY +G + A V D+ ++G P+
Sbjct: 359 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNV 418
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+YT+L+DG+ KLG++ +A +++EM +G++PN V + +I AFCK + EA + +
Sbjct: 419 YSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 478
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M ++ P +I LCE +++ A L + ++ + + + +T+I+ + G+
Sbjct: 479 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 538
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
I EA+KL +E +GS+ +TYN+LI G+C + E+ +A L++ M+ G+ P+ + N+
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI G C+ G +E + +EM+ +G P+ +F+ LI GL +G
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 642
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 195/384 (50%), Gaps = 6/384 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR + A F RI K + NTL++ V + R D + + + +VP+V T
Sbjct: 330 GRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI KK V A+ VL +M + G PN+ ++T ++ G+ G I+ A + ++
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P+ + L+ + K R+ +AV++ EM G +P+ T+ +I C+ +
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 505
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL DM+ V ++ +I+ G++++A +L ++ + + D +++I
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565
Query: 368 HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LC+ G++ +A+ LF++ R G +PS ++ N LI G+C S + EA +MV +G
Sbjct: 566 KGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGST 625
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P++ T+N LI G C+ G ++G+ + ++ +G P+ +++ L+ L + G + +
Sbjct: 626 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLL 685
Query: 487 VSMATASGSVESD-SWNFLLTRIV 509
+ G V +D +W+ LL +V
Sbjct: 686 LDEGIEDGFVPNDRTWSILLQSLV 709
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 204/404 (50%), Gaps = 10/404 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ + TY +++ L + DA + L + + + +F T+I + GR + A
Sbjct: 312 FTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSV-----IFNTLIHGFVTHGRLDDA 366
Query: 134 VKTFLR--IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
K L + + + V + N+L+ + L + ++ R+K PNV++ IL
Sbjct: 367 -KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK-GCKPNVYSYTIL 424
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ CK ++ A +L+EM + G+ PN V ++ + I A +F ++ +G
Sbjct: 425 VDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 484
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD T+ L+ G ++ + A+ ++ +M GV N VTY +I AF + + EAR
Sbjct: 485 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 544
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L+++M+ + + +I LC G+V+ A L++++LR +P + + +I+ LC
Sbjct: 545 LVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLC 604
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G + EA + E RGS P ++T+N+LI G+C + + + ++ + +G+ P+
Sbjct: 605 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 664
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
TYN L+ CK G + +L+E ++ G PN ++S+L++ L
Sbjct: 665 TYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 194/384 (50%), Gaps = 13/384 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++++IH D +++L+++ + I + ++I Y G LA++ +
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ +V S L++ + + D + + N + PN N LI A CK+
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLL-NEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A+ + EMP G P++ T +++ G +I++A + D++ G V + TY
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L++ +++ G + +A K+++EM G +E+TY +I+ C+ + +AR+L + ML+
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VPSS C +I+ LC G VE+A E K ++ + PD +++I+ LC+ G+I +
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+F + + G P +TYNTL++ +C+ + +A L D+ +E G PN T+++L+Q
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Query: 440 CKIGNAKEGIRILEEMLDKGCFPN 463
+ +E LD+ F N
Sbjct: 709 -----------VPQETLDRRTFYN 721
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 379 AKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
A +D R P+L T+ ++ +C E+ A + DM + G PN Y LI
Sbjct: 196 ANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHS 255
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
K E +++LEEM GC P+ +F+ +I GL + E K+V+ G
Sbjct: 256 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPD 315
Query: 499 D-SWNFLL 505
D ++ +L+
Sbjct: 316 DITYGYLM 323
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 392 PSLLTYNT----LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
P+ +YN L++G C A ++ DM+ + + P +FT+ ++++ C +
Sbjct: 174 PTFKSYNVVLEILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWN 502
+ +L +M GC PN + LI L + E +++ G V +++++N
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 285
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 197/400 (49%), Gaps = 38/400 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S++H L +ARA D E+ L ++ N + + +I Y G+ + AV+ F
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQM-VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 327
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ RH ++P+V T ++L+ +LCK
Sbjct: 328 MR----------------------------------RHS--ILPDVVTLSMLMGSLCKYG 351
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G P++ ++ +L GY +G + + +F +L G PD T+
Sbjct: 352 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 411
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+P+ VTY +I A C+ K +A + M+ +
Sbjct: 412 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 471
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I C G + A EL ++ D S+II+ LCK G++ +A
Sbjct: 472 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 531
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P + Y+ L+ G C ++ +A R++D MV G+EPNV Y L+ G
Sbjct: 532 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 591
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CKIG EG+ + EML +G P+ +S++I+GL+++G
Sbjct: 592 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ ++ N LL + KR D + + + VP+VF
Sbjct: 137 AHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVF 196
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ +IL+K+LC + A +L M G V PN+V + T++ G+ GD+ A +F
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY ++ K + A + +M + V PN TY +I +
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 316
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M + +P ++ LC+ GK+++A +++ + K PD +
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 376
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P T+N LI L +A ++++M +
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+P+V TY +I C+IG + + +M+D+G P+K +++ LI+G G+ +
Sbjct: 437 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 496
Query: 484 GKVVS 488
+++S
Sbjct: 497 KELIS 501
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 14/410 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ V + T++ AL + + D F N
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF-NQM 468
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V P+ + N LI+ C + A ++ E+ + GM ++V ++I+ G +
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G PDA Y++LMDGY +G++ A++V D M G+EPN V Y +
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQR PS+ L +ID L + G+ A + +
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
D + ++ L K EA LF E ++ +++T NT+I GM ++ + EA
Sbjct: 649 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 708
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + + PNV TY+++I K G +E + M + GC PN + ++ L
Sbjct: 709 LFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 768
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS----DLDSGAGALDE 521
+ G +S + D NF L + + DL S G E
Sbjct: 769 KKNEIVRAGAYLS--------KIDERNFSLEHLTAMLLVDLFSSKGTCRE 810
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 11/265 (4%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ N + ++E FC+ K++ E
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC++GK A +L + + C P+
Sbjct: 178 A---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 234
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I KEG + +A LF E +RG P L+TYN+++ +C++ + +A MV
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
K V PN +TYN LI G+ G KE +R+ +EM P+ + S+L+ L + G
Sbjct: 295 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 354
Query: 482 EVGKVV-SMATASGSVESDSWNFLL 505
E V +MA + + S+N +L
Sbjct: 355 EARDVFDTMAMKGQNPDVFSYNIML 379
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 14/274 (5%)
Query: 70 FHPN---FSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
HP+ +S D Y ++ K+ +A R FDA+ S ++ N + C T++ Y
Sbjct: 543 LHPDAVVYSMLMDGY-CLVGKMEKALRVFDAMVS--AGIEPNVVVYC------TLVNGYC 593
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
GR + + F + + ++ S + +++ L Q R + F + ++
Sbjct: 594 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTES-GIAMDI 652
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T NI+++ L K + AI + E+ +M + N++T T++ G +E AK +F
Sbjct: 653 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 712
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
I VP+ TY++++ IK G + +A + M++ G EPN ++ K +
Sbjct: 713 ISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 772
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
A L + +R + ++DL +G
Sbjct: 773 IVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 806
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F + NV+ ++ +LNT+++ + Q +R + +F S + ++VPNV T +I+I
Sbjct: 671 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFA-SISRSRLVPNVVTYSIMI 729
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
L K+ VE A + M + G PN ++ + + +I A I +R +
Sbjct: 730 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 789
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVM 278
+ T +L+D + G + ++ +
Sbjct: 790 LEHLTAMLLVDLFSSKGTCREQIRFL 815
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 210/414 (50%), Gaps = 11/414 (2%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
YA F N + T++ +I+ L + + + + + +K + T+I +
Sbjct: 204 YAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM-ETLGVKPNVVTYNTIIHGHC 262
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKV 181
L G+ + A F ++ ++ + N+ ++ L + R + L+ M + +
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGG-----L 317
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VPN T N LI C K D++ A DEM S G++ +LVT+ + G + +A
Sbjct: 318 VPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADN 377
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ ++G +PDA T+ +L++GY + G A ++DEM G++P VTY +I
Sbjct: 378 MIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLG 437
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + EA L + Q +P + +ID C G ++ A +L K + +PD
Sbjct: 438 KRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEI 497
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T++ C+EGK+ EA++L DE +R I P ++YNTLI+G + ++ +A R+ D+M
Sbjct: 498 TYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G +P + TYN LIQG CK + +L+EM+ KG P+ +++ +IE +
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 197/367 (53%), Gaps = 3/367 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+E V+ +V + NT+++ ++ ++F+ + K + P+ +T N I LCK+
Sbjct: 241 HMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDK-GLEPDCYTYNSFISGLCKE 299
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E A ++ +M G+VPN VT+ ++ GY +GD++ A +++ +G + TY
Sbjct: 300 GRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTY 359
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+ + GR+ DA ++ EM + G+ P+ VT+ ++I +C+ + A LLD+M+
Sbjct: 360 NLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVG 419
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P+ +I +L + ++++A L+ ++ ++ +PD + + +I C G I
Sbjct: 420 KGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDR 479
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +L E + + P +TYNTL+ G C ++ EA +L D+M +G++P+ +YN LI
Sbjct: 480 AFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLIS 539
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G+ K G+ K+ R+ +EM+ G P +++ LI+GL ++ EGE + + S +
Sbjct: 540 GYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKN-QEGEHAEELLKEMVSKGIT 598
Query: 498 SDSWNFL 504
D +L
Sbjct: 599 PDDSTYL 605
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 175/363 (48%), Gaps = 39/363 (10%)
Query: 182 VPNVFTC-----------------------------------NILIKALCKKDDVEGAIR 206
VPN+ TC NI+I LCK+ ++ A
Sbjct: 178 VPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKE 237
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+ M ++G+ PN+VT+ TI+ G+ RG + A+ +F + D+G PD TY + G
Sbjct: 238 FIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLC 297
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K GRL +A ++ +M + G+ PN VTY +I+ +C +A D+M+ + + S
Sbjct: 298 KEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLV 357
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
I L EG++ DA + K + K MPD + +I+ C+ G A L DE
Sbjct: 358 TYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEM 417
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+G P+L+TY +LI + + + EA L+ + ++G+ P++ +N LI G C GN
Sbjct: 418 VGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNI 477
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNF 503
++L+EM + P++ +++ L++G G E +++ G ++ D S+N
Sbjct: 478 DRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG-IKPDHISYNT 536
Query: 504 LLT 506
L++
Sbjct: 537 LIS 539
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 146/307 (47%), Gaps = 1/307 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
++L++A C+ A+ + G VPN+ T +L ++ + A ++ ++
Sbjct: 150 DLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFR 209
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
T+ ++++ K G+L A + + ME GV+PN VTY +I C K
Sbjct: 210 MNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQR 269
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
AR + M + P I LC+EG++E+A L ++L +P+ + +I
Sbjct: 270 ARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALID 329
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C +G + +A DE +G + SL+TYN I + + +A + +M EKG+ P
Sbjct: 330 GYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP 389
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ T+N+LI G+C+ G+AK +L+EM+ KG P +++ LI L + E +
Sbjct: 390 DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALF 449
Query: 488 SMATASG 494
S G
Sbjct: 450 SKIQQEG 456
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 7/293 (2%)
Query: 240 KRVFGDI-LDRGWVPDATT--YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ +F ++ L R V TT + +L+ Y +L + +A++ +++ G PN T M
Sbjct: 128 RTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQM 187
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ F K ++ A L +M + S +I++LC+EGK++ A E +
Sbjct: 188 LSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGV 247
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ +TIIH C GK A+ +F ++G P TYN+ I+G+C+ L EA
Sbjct: 248 KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L M+E G+ PN TYN LI G+C G+ + +EM+ KG + +++L I L+
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF 367
Query: 476 ESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRI--VSDLDSGAGALDELLVK 525
G G+ ++ G + ++ + N L+ D G LDE++ K
Sbjct: 368 MEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 211/412 (51%), Gaps = 12/412 (2%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENLFITVIRNYGLAG 128
N + TY +IH L R+ D + +E+ IK G ++ ++++ + AG
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEI-----IKTGLVIDAAMYNSLVKGFCQAG 348
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R + A K F F R++R+ N ++ L + D ++ +P+ T
Sbjct: 349 RVQEAWK-FWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTF 407
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI LC+ A + +E G ++ ++++++ G G + +A +V+ +
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P++ Y L+ G+ ++ R +DAV++ +M DNG P +TY +I+ CK +K E
Sbjct: 468 DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQE 527
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A ++ +M++ + P +I L + K++DA +WK++L K D + + +IH
Sbjct: 528 ASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIH 587
Query: 369 WLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LC GK+ EA +F + ++ P+L+TYNTL+ G+ E+ + +A LW + E G+E
Sbjct: 588 GLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLE 647
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
P++ +YN I+G C EGI++L+E+L +G P ++++L+ + + G
Sbjct: 648 PDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/556 (23%), Positives = 241/556 (43%), Gaps = 77/556 (13%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
PP K P RL+ +I + + AL P F ++ +LA +
Sbjct: 2 PPAKLDPDPPPIHRLLELIKSEPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLATSS 61
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRS 151
L + + E+ + V+ + A P+ A+ F + +RS
Sbjct: 62 PSHLPRLLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRS 121
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKF---KVVPNVFTCNILIKALC------------ 196
N LL+A V+ +R+ F + H ++ PN+ T NI++++LC
Sbjct: 122 HNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLF 181
Query: 197 -----------------------KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
K+D ++ A+ +LDEMP + P++V + +LGG
Sbjct: 182 DSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKA 241
Query: 234 GDIENAKRVFGDIL-DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G+ E RV+ ++ D G P+ TY V++DG K GR + +V + M N ++P+ +T
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVIT 301
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR-- 350
YG++I C+ A + ++++ V +A+ ++ C+ G+V++A + W
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG 361
Query: 351 -------------------------------LLRKN--CMPDNAISSTIIHWLCKEGKIW 377
LL K+ C+PD T+IH LC+ G
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421
Query: 378 EAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +F+E G + +Y+++I G+C L +A ++++ M + G +PN YN LI
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-S 495
GFC++ + +RI +M D GC P +++ LI+GL ++ E V +G +
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541
Query: 496 VESDSWNFLLTRIVSD 511
+ ++ L+ + SD
Sbjct: 542 PDITTYGSLIRGLFSD 557
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 234/492 (47%), Gaps = 53/492 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ LA+ D LL E+ ++ P++ C L + AG E ++
Sbjct: 195 TYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFK----AGEFEKVMRV 250
Query: 137 FLRIEKFNVQR-SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ ++ K R ++ + N +L+ L + R+ V +++ + P+V T ILI L
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN-NLQPDVITYGILIHGL 309
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ DV+GA RV E+ G+V + + +++ G+ G ++ A + F D + +
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNL 368
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY +++ G G + +A+++ D +E D P+ VT+G +I C+ + +A + +
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ +I+ LC G++ DA ++++++ + C P++ I + +I C+
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY- 432
+ +A +++ + + G P+++TYNTLI G+C++ + EA + +MVE G P++ TY
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548
Query: 433 ----------------------------------NMLIQGFCKIGNAKEGIRILEEMLD- 457
N+LI G C G E + + +M +
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIVS--DLD 513
K C PN +++ L++GLYE+G + + + T G +E D S+N + + S +
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG-LEPDIISYNTRIKGLCSCDRIH 667
Query: 514 SGAGALDELLVK 525
G LDE+L +
Sbjct: 668 EGIQLLDEVLSR 679
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 11/284 (3%)
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG----VEPNEVTY 293
+A R IL G P ++ L+D +++ R +DA + + PN TY
Sbjct: 104 DAFRALPSIL--GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+++ + C A L D + +R+ P ++ L ++ +++ A +L + R
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPR 221
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELT 411
PD + ++ K G+ + +++D+ + G+ P+L TYN ++ G+C+
Sbjct: 222 SRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFK 281
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
E G +W+ MV ++P+V TY +LI G C+ G+ R+ E++ G + ++ L+
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLV 341
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSG 515
+G ++G E K A +G ++N ++ + DSG
Sbjct: 342 KGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGL---FDSG 382
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ + TY S+I L + D S+ ++ +K + +I AG+ + A
Sbjct: 540 FTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK-GLKVDVMMHNILIHGLCSAGKVDEA 598
Query: 134 VKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ F + EK N ++ + NTL++ L + D ++ S + + P++ + N I
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW-TSITEDGLEPDIISYNTRI 657
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K LC D + I++LDE+ S G++P ++T ++ + G I+
Sbjct: 658 KGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 212/428 (49%), Gaps = 10/428 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ + + +LA A D V+ L E++ + C E+ + I + AG + A+KTF R
Sbjct: 54 HEATVRRLAAAGDVDGVQYALQEMRLR-GVACTEDALVAAIGAFARAGSADRALKTFYRA 112
Query: 141 EKFNVQR-SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ VR N LL+AL++ V ++ N R K V PNV+T N+LI+ALC+ D
Sbjct: 113 SDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMR-KAGVDPNVYTYNLLIRALCQND 171
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A ++LDEM G P+ V+H TI+ G G +E A+ + VP +Y
Sbjct: 172 RVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYN 226
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ R+ + V++EM G++PN VTY +++AFCK ++ A +L M+
Sbjct: 227 AVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM 286
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ E+GKV DA +W ++ + P + +I LC G + A
Sbjct: 287 GCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA 346
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
F+ +R ++ P+ TY+TL+ G + +L A +W++M G +PNV Y +I
Sbjct: 347 LDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDV 406
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK + ++++ML C PN +F+ LI L + G G V +G +
Sbjct: 407 LCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 466
Query: 499 D-SWNFLL 505
D ++N LL
Sbjct: 467 DRTYNELL 474
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 220/483 (45%), Gaps = 60/483 (12%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN----PEIKCGENLFITVIRNYGLAGRPEL 132
N TY+ +I L + DA +L E+ + E+ G T++ GR E
Sbjct: 156 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHG-----TIVSGMCKLGRVEE 210
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTC 188
A + FL E VQ S N +++AL R + +V+ M + + PNV T
Sbjct: 211 A-RGFL-AETVPVQAS---YNAVVHALCGEFRMWEVFSVVNEMVQRG-----LQPNVVTY 260
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
++ A CK ++ A +L M SMG PN++T T ++ G+ G + +A ++ ++D
Sbjct: 261 TTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVD 320
Query: 249 RGW-----------------------------------VPDATTYTVLMDGYIKLGRLTD 273
GW +P+ATTY+ L+DG+ G L
Sbjct: 321 EGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDG 380
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ + +EM+ +G +PN V Y MI+ CK +A +L+D ML P++ +I
Sbjct: 381 AMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIG 440
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIP 392
LC+ G+V A ++ + R C P++ + ++H L +EG +A + E G
Sbjct: 441 RLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFEL 500
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
SL+TYNT+I +C+ A L M+ +G++P+ FT+N +I +CK G +L
Sbjct: 501 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 560
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+M C N ++++LI L G + ++ M +WN L+ I ++
Sbjct: 561 GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620
Query: 512 LDS 514
+ +
Sbjct: 621 IGT 623
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 165/378 (43%), Gaps = 49/378 (12%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ L DV+G L EM G+ +G + G + A + F D G
Sbjct: 58 VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117
Query: 252 V-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P Y L+D ++ + V V D M GV+PN TY ++I A C+ + AR
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+LD+M ++ P ++ +C+ G+VE+A R +P A + ++H L
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAVVHAL 232
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT------------------ 411
C E ++WE + +E +RG P+++TY T++ C++ EL
Sbjct: 233 CGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 292
Query: 412 -----------------EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+A +W MV++G P+ +YN+LI+G C IG+ K +
Sbjct: 293 LTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNS 352
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-----VESDSWNFLLTRIV 509
M PN T++S L++G +G+ + + +SG V ++ + L +++
Sbjct: 353 MKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMM 412
Query: 510 SDLDSGAGALDELLVKNC 527
D +D++L+ NC
Sbjct: 413 --FDQAESLIDKMLMDNC 428
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 210/422 (49%), Gaps = 6/422 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I ++ D +L + P++ + T++R +G+ + A++ R
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMNVAPDVV----TYNTILRTLCDSGKLKQAMEVLDR 184
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + L+ A + + R+K P+V T N+LI +CK+
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK-PDVVTYNVLINGICKEG 243
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ L+ MPS G PN++TH IL G +A+++ D+L +G P T+
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + G L A+ ++++M +G PN ++Y ++ FCK KK A LD M+ R
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GKV+ A E+ +L K C P +T+I L K GK A
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE R G P ++TY++L++G+ ++ EA + + D+ G+ PN TYN ++ G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK I L M+ K C P + ++++LIEG+ G E +++ + G V+
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 543
Query: 499 DS 500
S
Sbjct: 544 SS 545
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 164/315 (52%), Gaps = 6/315 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P++ C LI+ C+ + A V++ + G VP+++T+ ++ GY G+I+NA +
Sbjct: 89 IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQ 148
Query: 242 VFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V LDR V PD TY ++ G+L A++V+D P+ +TY ++IEA
Sbjct: 149 V----LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEAT 204
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK G+A LLD+M + P +I+ +C+EG++++A + + C P+
Sbjct: 205 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 264
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ +C G+ +A+KL D +G PS++T+N LI +C L A + +
Sbjct: 265 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 324
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M G PN +YN L+ GFCK I L+ M+ +GC+P+ +++ L+ L + G
Sbjct: 325 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 384
Query: 480 EGEVGKVVSMATASG 494
++++ ++ G
Sbjct: 385 VDVAVEILNQLSSKG 399
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 172/340 (50%), Gaps = 7/340 (2%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ L + ++E + L+ M G +P+++ T+++ G+ G + A V + G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VPD TY VL+ GY K G + +A++V+D M V P+ VTY ++ C K +A
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+LD LQ++ P +I+ C+E V A +L + K PD + +I+ +C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ EA K + G P+++T+N ++ MC + +A +L DM+ KG P+V
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
T+N+LI C+ G I ILE+M GC PN S++ L+ G + + + +
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Query: 491 TASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ G + ++N LLT + D +D L++L K C
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 154/310 (49%), Gaps = 14/310 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L++ I ++ LD A++ + + N T++ I+ + + E LL+++ +
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSY--GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLR 292
Query: 107 ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+P + N+ I + GL GR A+ ++ + S N LL+ + K
Sbjct: 293 KGCSPSV-VTFNILINFLCRQGLLGR---AIDILEKMPMHGCTPNSLSYNPLLHGFCKEK 348
Query: 164 RYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ D + +L SR + P++ T N L+ ALCK V+ A+ +L+++ S G P L+
Sbjct: 349 KMDRAIEYLDIMVSRGCY---PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ T++ G G E A ++ ++ +G PD TY+ L+ G + G++ +A+K ++
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E G+ PN +TY ++ CK +++ A + L M+ ++ P+ A +I+ + EG
Sbjct: 466 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 525
Query: 342 EDACELWKRL 351
++A +L L
Sbjct: 526 KEALDLLNEL 535
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 211/412 (51%), Gaps = 12/412 (2%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENLFITVIRNYGLAG 128
N + TY +IH L R+ D + +E+ IK G ++ ++++ + AG
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEI-----IKTGLVIDAAMYNSLVKGFCQAG 348
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R + A K F F R++R+ N ++ L + D ++ +P+ T
Sbjct: 349 RVQEAWK-FWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTF 407
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI LC+ A + +E G ++ ++++++ G G + +A +V+ +
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P++ Y L+ G+ ++ R +DAV++ +M DNG P +TY +I+ CK +K E
Sbjct: 468 DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQE 527
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A ++ +M++ + P +I L + K++DA +WK++L K D + + +IH
Sbjct: 528 ASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIH 587
Query: 369 WLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LC GK+ EA +F + ++ P+L+TYNTL+ G+ E+ + +A LW + E G+E
Sbjct: 588 GLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLE 647
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
P++ +YN I+G C EGI++L+E+L +G P ++++L+ + + G
Sbjct: 648 PDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/558 (24%), Positives = 246/558 (44%), Gaps = 81/558 (14%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
PP K P RL+ +I + + AL P F ++ +LA +
Sbjct: 2 PPAKLDPDPPPIHRLLELIKSEPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLATSS 61
Query: 93 A--FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSV 149
+ +LL L+ P E+ + V+ + A P+ A+ F + +
Sbjct: 62 PSHLPCLLNLLPRLRHRPRFS--ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGI 119
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKF---KVVPNVFTCNILIKALC---------- 196
RS N LL+A V+ +R+ F + H ++ PN+ T NI++++LC
Sbjct: 120 RSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVT 179
Query: 197 -------------------------KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K+D ++ A+ +LDEMP G+ P++V + +LGG
Sbjct: 180 LFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCF 239
Query: 232 WRGDIENAKRVFGDIL-DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G+ E RV+ ++ D G P+ TY V++DG K GR + +V + M N ++P+
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDV 299
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TYG++I C+ A + ++++ V +A+ ++ C+ G+V++A + W
Sbjct: 300 ITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDS 359
Query: 351 ---------------------------------LLRKN--CMPDNAISSTIIHWLCKEGK 375
LL K+ C+PD T+IH LC+ G
Sbjct: 360 AGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGF 419
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+A +F+E G + +Y+++I G+C L +A ++++ M + G +PN YN
Sbjct: 420 ANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNA 479
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI GFC++ + +RI +M D GC P +++ LI+GL ++ E V +G
Sbjct: 480 LISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENG 539
Query: 495 -SVESDSWNFLLTRIVSD 511
+ + ++ L+ + SD
Sbjct: 540 FTPDITTYGSLIRGLFSD 557
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 234/492 (47%), Gaps = 53/492 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ LA+ D LL E+ ++ P++ C L + AG E ++
Sbjct: 195 TYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFK----AGEFEKVMRV 250
Query: 137 FLRIEKFNVQR-SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ ++ K R ++ + N +L+ L + R+ V +++ + P+V T ILI L
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN-NLQPDVITYGILIHGL 309
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ DV+GA RV E+ G+V + + +++ G+ G ++ A + F D + +
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNL 368
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY +++ G G + +A+++ D +E D P+ VT+G +I C+ + +A + +
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ +I+ LC G++ DA ++++++ + C P++ I + +I C+
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY- 432
+ +A +++ + + G P+++TYNTLI G+C++ + EA + +MVE G P++ TY
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548
Query: 433 ----------------------------------NMLIQGFCKIGNAKEGIRILEEMLD- 457
N+LI G C G E + + +M +
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIVS--DLD 513
K C PN +++ L++GLYE+G + + + T G +E D S+N + + S +
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG-LEPDIISYNTRIKGLCSCDRIH 667
Query: 514 SGAGALDELLVK 525
G LDE+L +
Sbjct: 668 EGIQLLDEVLSR 679
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 11/284 (3%)
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG----VEPNEVTY 293
+A R IL G P ++ L+D +++ R +DA + + PN TY
Sbjct: 104 DAFRALPSIL--GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+++ + C A L D + +R+ P ++ L ++ +++ A +L + R
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPR 221
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELT 411
PD + ++ K G+ + +++D+ + G+ P+L TYN ++ G+C+
Sbjct: 222 SGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFK 281
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
E G +W+ MV ++P+V TY +LI G C+ G+ R+ E++ G + ++ L+
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLV 341
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSG 515
+G ++G E K A +G ++N ++ + DSG
Sbjct: 342 KGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGL---FDSG 382
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ + TY S+I L + D S+ ++ +K + +I AG+ + A
Sbjct: 540 FTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK-GLKVDVMMHNILIHGLCSAGKVDEA 598
Query: 134 VKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ F + EK N ++ + NTL++ L + D ++ S + + P++ + N I
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW-TSITEDGLEPDIISYNTRI 657
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K LC D + I++LDE+ S G++P ++T ++ + G I+
Sbjct: 658 KGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 210/422 (49%), Gaps = 6/422 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I ++ D +L + P++ + T++R +G+ + A++ R
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMNVAPDVV----TYNTILRTLCDSGKLKQAMEVLDR 241
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + L+ A + + R+K P+V T N+LI +CK+
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK-PDVVTYNVLINGICKEG 300
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ L+ MPS G PN++TH IL G +A+++ D+L +G P T+
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + G L A+ ++++M +G PN ++Y ++ FCK KK A LD M+ R
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GKV+ A E+ +L K C P +T+I L K GK A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE R G P ++TY++L++G+ ++ EA + + D+ G+ PN TYN ++ G
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK I L M+ K C P + ++++LIEG+ G E +++ + G V+
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 600
Query: 499 DS 500
S
Sbjct: 601 SS 602
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 164/315 (52%), Gaps = 6/315 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P++ C LI+ C+ + A V++ + G VP+++T+ ++ GY G+I+NA +
Sbjct: 146 IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQ 205
Query: 242 VFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V LDR V PD TY ++ G+L A++V+D P+ +TY ++IEA
Sbjct: 206 V----LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEAT 261
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK G+A LLD+M + P +I+ +C+EG++++A + + C P+
Sbjct: 262 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 321
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ +C G+ +A+KL D +G PS++T+N LI +C L A + +
Sbjct: 322 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 381
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M G PN +YN L+ GFCK I L+ M+ +GC+P+ +++ L+ L + G
Sbjct: 382 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 441
Query: 480 EGEVGKVVSMATASG 494
++++ ++ G
Sbjct: 442 VDVAVEILNQLSSKG 456
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 172/340 (50%), Gaps = 7/340 (2%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ L + ++E + L+ M G +P+++ T+++ G+ G + A V + G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VPD TY VL+ GY K G + +A++V+D M V P+ VTY ++ C K +A
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+LD LQ++ P +I+ C+E V A +L + K PD + +I+ +C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ EA K + G P+++T+N ++ MC + +A +L DM+ KG P+V
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
T+N+LI C+ G I ILE+M GC PN S++ L+ G + + + +
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Query: 491 TASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ G + ++N LLT + D +D L++L K C
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 157/314 (50%), Gaps = 22/314 (7%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKF--HPNFSHNYDTYHSIIHK--LARARAFDAVESLLT 102
L++ I ++ LD A++ + + PN H+II + + R DA E LL+
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNV-----ITHNIILRSMCSTGRWMDA-EKLLS 345
Query: 103 ELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
++ + +P + N+ I + GL GR A+ ++ + S N LL+
Sbjct: 346 DMLRKGCSPSV-VTFNILINFLCRQGLLGR---AIDILEKMPMHGCTPNSLSYNPLLHGF 401
Query: 160 VQNKRYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ K+ D + +L SR + P++ T N L+ ALCK V+ A+ +L+++ S G
Sbjct: 402 CKEKKMDRAIEYLDIMVSRGCY---PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 458
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P L+T+ T++ G G E A ++ ++ +G PD TY+ L+ G + G++ +A+K
Sbjct: 459 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 518
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++E G+ PN +TY ++ CK +++ A + L M+ ++ P+ A +I+ +
Sbjct: 519 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 578
Query: 338 EGKVEDACELWKRL 351
EG ++A +L L
Sbjct: 579 EGLAKEALDLLNEL 592
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 249/490 (50%), Gaps = 13/490 (2%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P +L ++ ++ L+IF G + H +D Y+ I+KL F ++ LL +
Sbjct: 79 PVQLCKLLELPLDVPTLLEIFERVGG-QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQ 137
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQN 162
+K+ I E++F+ ++++YG AG+P A++ L + + + + +S + +L LV
Sbjct: 138 MKEEG-IVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTG 196
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ +F + K V P VFT I++KALC ++V+ A +L +M G VPN +
Sbjct: 197 NCPQVATNVFYDMLSK-GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIV 255
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ T++ + + A ++ ++ G +PD T+ ++ G K+ ++ DA K++D M
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G P+ +TYG ++ C+ K EAR +L + P++A+ +I+ G+++
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLK 371
Query: 343 DACE-LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
+A L + ++ PD + ++H LCKEG + A+ L +E RG P+++TY L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G+C++ L EAG + +M +G+ N YN LI C+ + +L EM KGC
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIV--SDLDSGAG 517
P+ +++ LI GL + E ++ G+V ++ ++N L+ ++
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 518 ALDELLVKNC 527
++++L + C
Sbjct: 552 LVNDMLFRGC 561
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 171/387 (44%), Gaps = 45/387 (11%)
Query: 139 RIEKFNVQRSV---------RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
RI K N R + LNTL+N V + + + F P++FT N
Sbjct: 335 RIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYN 394
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
IL+ LCK+ + A +++EM G PN++T+ ++ G G +E A V ++ R
Sbjct: 395 ILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454
Query: 250 GWV-----------------------------------PDATTYTVLMDGYIKLGRLTDA 274
G PD TY L+ G K+ R+ +A
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ M +G N VTY +I A + +A L++DML R +I
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPS 393
C+ G +E EL+++++ D + +I+ LCK GK+ A + D RG +P
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN+++ G+C+ + EA L+D + +GV P+ FTYN I CK G +
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFY 694
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNE 480
++ G P+ ++++L+ L + N+
Sbjct: 695 RGIENGFVPSNLTWNVLVYTLLKQSNQ 721
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 9/334 (2%)
Query: 73 NFSHNYD--TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AG 128
NF D TY+ ++H L + + L+ E+ + C N+ I GL AG
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR---GCEPNVITYAILVNGLCKAG 439
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
E A + + + N L+ AL + ++ + + K P++FT
Sbjct: 440 LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTK-GCKPDLFTY 498
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N LI LCK D ++ A R+ M G V N VT+ T++ + RG + A + D+L
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG D TY L+ + K+G + +++ ++M +G+ + ++ +MI CK K
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L D + R +VP V++ LC+ G++++A L+ RL + PD +T I
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLI 401
W CKEG + +A F E G +PS LT+N L+
Sbjct: 679 WQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 179/343 (52%), Gaps = 2/343 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S N LL ++ + K + + L + F + PN++T +ILI
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTL-LSLSHQMDSFGIPPNIYTLHILI 103
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + V A VL ++ +G P+ T TT++ G G I A +F ++ G+
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L++G K+G + A++++ M +PN Y +I++ CK ++ EA NL
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P +I LC + + L ++ MPD +T++ LCK
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK+ EA + D+ +RG P+++TY L+ G C +E+ EA +++D MV KG PNV +
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
YN LI G+CKI + + + EM + P+ ++S LI GL
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 245/540 (45%), Gaps = 39/540 (7%)
Query: 6 HQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH 65
H + + S +I GA +S+ ++P P + +L++ I + ++ L + H
Sbjct: 29 HNRFHSKSLHFNTIDGA---ISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSH 85
Query: 66 YAGKFH--PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNP--------------E 109
F PN + +S H AF + +L +L P E
Sbjct: 86 QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL-KLGHQPDTATFTTLIRGIYVE 144
Query: 110 IKCGENLFI-----------------TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
K GE L + T+I G A++ + + N Q +V +
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT++++L ++++ +F K + P++FT N LI ALC + + +L+EM
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
++P++V+ T++ G + A V ++ RG P+ TYT LMDG+ L +
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+AVKV D M G PN ++Y +I +CK ++ +A L +M +++ +P + +I
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 383
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI- 391
LC +++DA L+ ++ + +P+ ++ +LCK + EA L E ++
Sbjct: 384 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD 443
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P + N I GMC + EL A L+ ++ KG++P+V+TY+++I G C+ G E ++
Sbjct: 444 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 503
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
EM + GC N ++ + G + +++ A G S L +++SD
Sbjct: 504 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 563
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 231/479 (48%), Gaps = 16/479 (3%)
Query: 14 CLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFH 71
C L +G A L+ I + P L+ I+ + + AL +F F
Sbjct: 107 CHLNRVGFAFSVLAKIL---KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGR 129
P+ TY ++I+ L + A LL + Q C N+F T+I + +
Sbjct: 164 PDVV----TYGTLINGLCKVGNTSAAIRLLGSMVQK---NCQPNVFAYNTIIDSLCKDRQ 216
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
A F + + + + N+L++AL + V + N K++P+V + N
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLL-NEMVDSKIMPDVVSFN 275
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
++ ALCK+ V A V+D+M G+ PN+VT+T ++ G+ +++ A +VF ++ +
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G +P+ +Y L++GY K+ R+ A+ + EM + P+ VTY +I C ++ +A
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 395
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L +M+ +P+ ++D LC+ + +A L K + N PD +++ I
Sbjct: 396 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 455
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
+C+ G++ A+ LF +G P + TY+ +I G+C L EA +L+ +M E G N
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 515
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
YN + +GF + I++L+EM+ +G + ++ +L ++ L + G + + +++
Sbjct: 516 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 574
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 155/313 (49%), Gaps = 10/313 (3%)
Query: 149 VRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V S NT+++AL + + +D+V M + V PNV T L+ C +++ A
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRG-----VEPNVVTYTALMDGHCLLSEMDEA 325
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
++V D M G +PN++++ T++ GY I+ A +FG++ + +PD TY+ L+ G
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ RL DA+ + EM PN VTY ++++ CK + EA LL + P
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ ID +C G++E A +L+ L K PD S +I+ LC+ G + EA KLF
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E E G + YNT+ G + E + A +L +MV +G + T + ++ G
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565
Query: 444 NAKEGIRILEEML 456
+ +IL E +
Sbjct: 566 LDQSLKQILREFV 578
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+++I+ + + D L E+ + E+ + T+I R + A+
Sbjct: 340 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQ-ELIPDTVTYSTLIHGLCHVERLQDAIAL 398
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + ++ + LL+ L +N RY + + + P++ NI I +C
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKN-RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 457
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++E A + + S G+ P++ T++ ++ G RG ++ A ++F ++ + G +
Sbjct: 458 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 517
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y + G+++ + A++++ EM G + T + ++ + +L +
Sbjct: 518 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREF 577
Query: 317 LQ 318
+Q
Sbjct: 578 VQ 579
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 209/417 (50%), Gaps = 19/417 (4%)
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
G + ++RN + + + A+ F + K S+ N LL+A+ + K++DLV +
Sbjct: 49 GSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV-ISL 107
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ + N++T NILI C++ + A+ +L +M +G P++VT +++L GY
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
I +A + +++ G+ PD T+T L+ G + ++AV ++D M G +PN VT
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
YGV++ CK A NLL+ M K + + VID LC+ +DA L+ +
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELT 411
K P+ S++I LC + +A +L D ER P+++T+N LI + +L
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +L+D+M+++ ++P++FTY+ LI GFC E + E M+ K CFPN +++ LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 472 EG-------------LYESGNEGEVGKVVSMATASGSV----ESDSWNFLLTRIVSD 511
G E G VG V+ T + D+ + ++VSD
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 225/448 (50%), Gaps = 13/448 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P +L+S I + + DL + + + SHN TY+ +I+ R
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL--GISHNLYTYNILINCFCRRSQIS 137
Query: 96 AVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+LL +L P I +L + Y R AV ++ + + +
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 153 NTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
TL++ L + NK + V L+ + + + PN+ T +++ LCK+ D++ A +L++M
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ + N+V ++T++ ++A +F ++ ++G P+ TY+ L+ R
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+DA +++ +M + + PN VT+ +I+AF K K EA L D+M++R P +
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I+ C ++++A +++ ++ K+C P+ +T+I+ CK +I E +LF E +RG
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ + +TY TLI G ++ + A ++ MV GV PN+ TYN L+ G CK G ++ +
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ E + P +++++IEG+ ++G
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 195/387 (50%), Gaps = 7/387 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE--LAVKTF 137
T+ ++IH L +L+ + Q C NL + GL R + LA
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQR---GCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ +V +T++++L + + D +F +K V PNV T + LI LC
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCN 307
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A R+L +M + PN+VT ++ +V G + A++++ +++ R PD T
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ L++G+ RL +A + + M PN VTY +I FCK K+ E L +M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR V ++ +I + ++A ++K+++ P+ +T++ LCK GK+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +F+ +R + P++ TYN +I GMC++ ++ + L+ + KGV+P+V YN +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPN 463
GFC+ G +E + +M + G P+
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 171/352 (48%), Gaps = 15/352 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+V+ + ++ ++DLA + + A K N Y ++I L + R D +L TE+
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVV----IYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ P + +L I+ + NY R A + + + + +V + N L++A V+
Sbjct: 287 ENKGVRPNVITYSSL-ISCLCNYE---RWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ ++ + K + P++FT + LI C D ++ A + + M S PN+V
Sbjct: 343 EGKLVEAEKLY-DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ T++ G+ I+ +F ++ RG V + TYT L+ G+ + +A V +M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+GV PN +TY +++ CK K +A + + + + K P+ +I+ +C+ GKV
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
ED +L+ L K PD I +T+I C++G EA LF + E G +P
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY S+I+ D + + EL + + C N+ + T+I + A R + V+ F
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMF-ELMISKD--CFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + + + + TL++ Q + D ++FK V PN+ T N L+ LCK
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCK 482
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+E A+ V + + M P + T+ ++ G G +E+ +F + +G PD
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
Y ++ G+ + G +A + +M ++G P+ T
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 206/392 (52%), Gaps = 13/392 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLM 171
F T+I+ + R A K F+R++K +V + TL+ L ++ ++
Sbjct: 164 FTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEML 223
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
S + F PNV + +I+I LCK + E AI + +EM G+ PN+VT + ++
Sbjct: 224 NDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLC 283
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G + AK++ ++ G VP+ TYT L+ G+ +G L A ++ M G EP+ +
Sbjct: 284 KEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVI 343
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+Y ++I +CK K EA L ++ML P ++ L GKV+DA EL+ R+
Sbjct: 344 SYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF-RV 402
Query: 352 LRKNCMP-DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAE 409
++ MP D I + LCK G I+EA KLF+E E ++ + T+ LI G+C++ +
Sbjct: 403 IKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGK 462
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L A L++ + E+G++P+ Y+ +I GFCK G + + ++M + GC P+ ++S+
Sbjct: 463 LETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSI 522
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
L+ G YES ++ KVV + +E D W
Sbjct: 523 LMRGFYES---NKLEKVVQL--LHRMIEKDVW 549
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 186/329 (56%), Gaps = 2/329 (0%)
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
FN + +V S + +++ L + ++ +F N V PNV T ++LI LCK+ V
Sbjct: 231 FNCRPNVISYSIIIDGLCKVGNWEEAICLF-NEMVDQGVQPNVVTFSVLIDMLCKEGQVI 289
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A ++L+ M +G+VPNL T+T+++ G+ GD+ +AK +F + +G+ PD +Y +L+
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+GY K ++ +A+K+ +EM G+ P+ T GV+++A K +A+ L +
Sbjct: 350 NGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMP 409
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+CC +D LC+ G + +A +L+ L N D +I LCK GK+ A +L
Sbjct: 410 KDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWEL 469
Query: 383 FDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F++ +E G P + Y+++I G C+ ++ +A L+ M E G P++ TY++L++GF +
Sbjct: 470 FEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYE 529
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
++ +++L M++K +P+ ++++
Sbjct: 530 SNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 153/302 (50%), Gaps = 7/302 (2%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
++F+ N L+ L K + + +M G+ P+L+T ++ I
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
I+ RG++PD T+T L+ G R+ +A K+ M+ G PN VTYG +I+ C
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 304 KKSGEARNLLDDMLQ--RKYV----PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
A +ML YV P+ +ID LC+ G E+A L+ ++ +
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P+ S +I LCKEG++ +AKKL + + G +P+L TY +LI G C +L A L
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ M KG EP+V +YNMLI G+CK +E +++ EML G +P+ + +L++ L+
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389
Query: 477 SG 478
+G
Sbjct: 390 AG 391
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 168/319 (52%), Gaps = 11/319 (3%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ RS+ S N LL L + + Y V ++K H + P++ T NILI LC + +
Sbjct: 87 MMRSIFSFNRLLAGLAKIEHYSQVFSLYKQ-MHLAGLWPDLLTLNILINCLCNVNRINEG 145
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ + + G +P++VT TT++ G I A ++F + G P+ TY L+ G
Sbjct: 146 LAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKG 205
Query: 265 YIKLGRLTDAVKVMDEMEDN------GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
LG + A+K EM ++ PN ++Y ++I+ CK EA L ++M+
Sbjct: 206 LCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVD 265
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P+ +ID+LC+EG+V A +L + +++ +P+ +++I C G +
Sbjct: 266 QGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNS 325
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AK+LF +G P +++YN LI G C++ ++ EA +L+++M+ G+ P+V T +L++
Sbjct: 326 AKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLK 385
Query: 438 GFC---KIGNAKEGIRILE 453
K+ +AKE R+++
Sbjct: 386 ALFLAGKVDDAKELFRVIK 404
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 129/279 (46%), Gaps = 8/279 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N TY S+I ++ + L + P++ + +I Y + E A
Sbjct: 306 NLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVIS----YNMLINGYCKTLKVEEA 361
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+K F + + V++ LL AL + D +F+ + + + ++ C I +
Sbjct: 362 MKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIK-PYAMPKDLCICCIFLD 420
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK + A+++ +E+ S M ++ T ++ G G +E A +F + + G P
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
DA Y+ ++ G+ K G++ A + +ME+NG P+ +TY +++ F + K + LL
Sbjct: 481 DAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLL 540
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
M+++ P + V D++C++ K ++ +L +R
Sbjct: 541 HRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFF 579
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 6/312 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N T+ +I L + + LL + Q I NLF ++I+ + L G A
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ---IGIVPNLFTYTSLIKGFCLVGDLNSAK 327
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F+ + + V S N L+N + + + +F H + P+V T +L+KA
Sbjct: 328 ELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLH-VGMWPDVKTSGVLLKA 386
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L V+ A + + M +L L G G I A ++F ++ D
Sbjct: 387 LFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLD 446
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+ L+DG K G+L A ++ +++ + G++P+ + Y MI FCK + +A L
Sbjct: 447 IETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQ 506
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + P ++ E K+E +L R++ K+ PD+ I + + +CK+
Sbjct: 507 KMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDE 566
Query: 375 KIWEAKKLFDEF 386
K E L F
Sbjct: 567 KYKEWLDLLQRF 578
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPN 184
LAG+ + A + F I+ + + + + L+ L +N ++ + L + + K+
Sbjct: 389 LAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE 448
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
F C LI LCK +E A + +++ G+ P+ + +++++ G+ +G ++ A +F
Sbjct: 449 TFGC--LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQ 506
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ + G PD TY++LM G+ + +L V+++ M + V P++ Y ++ + CK +
Sbjct: 507 KMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDE 566
Query: 305 KSGEARNLLDDMLQRKY 321
K E +LL +K+
Sbjct: 567 KYKEWLDLLQRFFVQKH 583
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 45/151 (29%)
Query: 374 GKIWEAKKLFDEFER----GSIPSLLTYN------------------------------- 398
KI ++F +++ G P LLT N
Sbjct: 102 AKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDV 161
Query: 399 ----TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
TLI G+C + EA +L+ M + G PNV TY LI+G C +GN ++ +E
Sbjct: 162 VTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQE 221
Query: 455 MLDK------GCFPNKTSFSLLIEGLYESGN 479
ML+ C PN S+S++I+GL + GN
Sbjct: 222 MLNDTSPYVFNCRPNVISYSIIIDGLCKVGN 252
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 233/456 (51%), Gaps = 14/456 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N D ALQ F + + F H+ DT+ II L RA + +L ++ + ++ E
Sbjct: 130 RNSDHALQFFRWVERAGL-FRHDRDTHLKIIEILGRASKLNHARCILLDMPKKG-VEWDE 187
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+LF+ +I +YG AG + +VK F ++++ V+R+++S + L +++ RY + F N
Sbjct: 188 DLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYF-N 246
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ V+P T NI+I VE A R +EM + P++VT+ T++ GY
Sbjct: 247 AMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIK 306
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ R P +YT ++ GY+ +GR+ D +++ +EM+ G++PN VTY
Sbjct: 307 KMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYS 366
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C G+K EA+N++ +M++R P +++ ++I C+ G+++ A ++ K ++R
Sbjct: 367 TLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIR 426
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----PSLLT----YNTLIAGM 404
+ + +I CK G A KL D+ I SL YN +I +
Sbjct: 427 LSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYL 486
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C S + ++A L+ +++KGV+ + +N LI+G K G + IL+ M +
Sbjct: 487 CNSGQTSKAETLFRQLMKKGVQDPI-AFNNLIRGHSKEGAPESAFEILKIMGRREVPREA 545
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
++ LLIE + G + + +G + S
Sbjct: 546 DAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSS 581
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 183/450 (40%), Gaps = 61/450 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL------FITVIRNYGLAGRPELA 133
TY+++I+ R + + E E+K G N+ + T+I+ Y GR +
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMK-------GRNIEPTVISYTTMIKGYVSVGRVDDG 346
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF------KVVPNVFT 187
++ F ++ F ++ + + +TLL L ++ + K ++ + + T
Sbjct: 347 LRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLIT 406
Query: 188 CN-----------------------------ILIKALCKKDDVEGAIRVLDEM------- 211
C +LI+ CK + A+++LD++
Sbjct: 407 CQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIIL 466
Query: 212 -PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
P + + I+ G A+ +F ++ +G V D + L+ G+ K G
Sbjct: 467 RPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGA 525
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A +++ M V Y ++IE+F K + +A+ LD M++ ++P S+L
Sbjct: 526 PESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRS 585
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
V++ L E+G+++ A + ++ K + + + I+ L G + EA D G
Sbjct: 586 VMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNG 645
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P ++ L++ +C + A +L D +E+ + +Y ++ G
Sbjct: 646 CEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAY 702
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
IL +++ KG + +S LI L E GN
Sbjct: 703 SILCKIMQKGGATDWSSCKDLIRSLNEEGN 732
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 141/346 (40%), Gaps = 50/346 (14%)
Query: 120 VIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSL-------NTLLNALVQNKRYDLVHLM 171
+I N+ +G + AVK + IEK + R SL N ++ L + + +
Sbjct: 439 LIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETL 498
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F+ K P F N LI+ K+ E A +L M + + ++ ++
Sbjct: 499 FRQLMKKGVQDPIAF--NNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFL 556
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G+ +AK +++ G +PD++ + +M+ + GR+ A +VM+ M + GV+ N
Sbjct: 557 KKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKEN-- 614
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+D L K+++ L G VE+A L
Sbjct: 615 ---------------------MD------------LVAKILEALLLRGHVEEALGRIDLL 641
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAEL 410
+ C PD ++ LC +GK A KL D ER S +Y ++ + + +
Sbjct: 642 MNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKT 698
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
A + +++KG + + LI+ + GN K+ IL M+
Sbjct: 699 LNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQA-DILSRMI 743
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 210/423 (49%), Gaps = 6/423 (1%)
Query: 73 NFS--HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
NFS H + TY +I L + D VE ++ ++ + + + ++ ++ AG+
Sbjct: 86 NFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHL-IDSRVLGFLVTSFAQAGKF 144
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+LA K + ++ + S N LLN LV+ + +FK + F PN +T NI
Sbjct: 145 DLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENL-AFHSPPNTWTFNI 203
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI+ LC+ +VE + + M S G +P++VT+ T++ G +++ A + ++ R
Sbjct: 204 LIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRN 263
Query: 251 -WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
PD TYT ++ G+ KLG+L A + +EM +G+EP VT+ V+I+ F K A
Sbjct: 264 DCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAA 323
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+ + M +P +ID C G + ++W + +N P+ S II+
Sbjct: 324 EAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINA 383
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK+ +I EA+ L + + + P YN +I G C++ + EA + +M EK P+
Sbjct: 384 LCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPD 443
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
T+ +LI G C G E + I ++ML GC P+ + S L+ L ++G E +V
Sbjct: 444 KVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQ 503
Query: 489 MAT 491
A+
Sbjct: 504 TAS 506
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 168/367 (45%), Gaps = 6/367 (1%)
Query: 126 LAGRPELAVK--TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
L P++ +K F R+ F++ + L+ +L Q +DLV ++ R ++
Sbjct: 69 LNNNPQVGLKFMEFCRL-NFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLID 127
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ L+ + + + A +++ E+ + + +L V G + A +F
Sbjct: 128 SR-VLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLF 186
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ L P+ T+ +L+ G ++G + ++ + M+ G P+ VTY +I CK
Sbjct: 187 KENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKA 246
Query: 304 KKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A +LL ++ R P +I + GK+E A L++ ++R P
Sbjct: 247 NELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVT 306
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I K G + A+ + ++ S IP ++T+ +LI G C + ++ ++WD M
Sbjct: 307 FNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMK 366
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+ V PN++TY+++I CK E +L ++ FP ++ +I+G ++GN
Sbjct: 367 ARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVD 426
Query: 482 EVGKVVS 488
E +V+
Sbjct: 427 EANVIVT 433
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 185/358 (51%), Gaps = 8/358 (2%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
N + S LL+ L + K Y V ++ R + P+ T NIL+ LC + V
Sbjct: 91 NPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLS-GISPDCCTLNILLNCLCNVNRVGE 149
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+ V+ + G +P++VT+TT++ G I A +F + G P+A TY LM
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 264 GYIKLGRLTDAVKVMDEMEDNG------VEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
G + G ++ A+K+ EM ++ +P ++Y ++I+A CK ++ EAR+L ++M
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P+ +I C GK E+A L+ ++ + P+ + +I LCKEGK+
Sbjct: 270 VQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 329
Query: 378 EAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EAK L + +RG +P+LLTYN+LI G C +L A L+ M KG EP+V Y +LI
Sbjct: 330 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 389
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G+CK +E +++ ML G P+ ++ L+ GL++ G G+ K+ + G
Sbjct: 390 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG 447
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 198/414 (47%), Gaps = 41/414 (9%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLM 171
+ T+I+ + R A F R++K + + TL+ L + + ++
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEML 228
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+S + P V + +I+I ALCK + A + +EM GM P ++++T+++ G+
Sbjct: 229 NDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFC 288
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G E AKR+F +++++G P+ T+ VL+D K G++ +A +++ M G+ PN +
Sbjct: 289 CGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 348
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +IE FC AR L M + P +I+ C+ KVE+A +L+ +
Sbjct: 349 TYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM 408
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLL---------------- 395
L+ PD ++ L + GK+ +AKKLF + IP L
Sbjct: 409 LQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCL 468
Query: 396 --------------------TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+N LI G+C++ +L A L++ + ++ ++P+V TYN++
Sbjct: 469 FEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIM 528
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
I FC+ G + + ++M GC P+K +++ LI G +ES +V +++ M
Sbjct: 529 IHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 582
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 194/405 (47%), Gaps = 25/405 (6%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLAL----QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P + L+ + R N+ +AL ++ + + + NF +Y II L + R
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 95 DAVESLLTELK---QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
D L E+K P + + ++I + G+ E A + F + VQ +V +
Sbjct: 259 DEARDLFEEMKVQGMTPTVIS----YTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT 314
Query: 152 LNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
N L++ L + + DL+ +M + +VPN+ T N LI+ C D+ A +
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRG-----IVPNLLTYNSLIEGFCLVGDLNSAREL 369
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
MPS G P+++ +T ++ GY +E A +++ +L G PD TY L+ G +
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G++ DA K+ M+ G+ + YG+ + CK EA L + + + Y +
Sbjct: 430 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL--KSYNIKLDI 487
Query: 328 CCK--VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
C +ID LC+ GK+E A EL+++L ++ PD + +IH C+ G++ +A LF +
Sbjct: 488 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547
Query: 386 FER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
E+ G P +TY TLI G ES +L + L MV++ V +V
Sbjct: 548 MEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 42/283 (14%)
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + F ++ P +++T L+ G K+ + + ++M +G+ P+ T +++
Sbjct: 80 AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C + GE ++ +L+R Y+P +I LC E ++ A L+ R+ + C P
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199
Query: 359 DNAISSTIIHWLCKEGKIW----------------------------------------- 377
+ T++ LC+ G I
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259
Query: 378 EAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA+ LF+E + +G P++++Y +LI G C + EA RL+++MV +GV+PNV T+N+LI
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLI 319
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
CK G E +LE M+ +G PN +++ LIEG G+
Sbjct: 320 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 362
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 217/441 (49%), Gaps = 23/441 (5%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R DLA+Q F +AG+ + H+ +Y+ ++ L ++ + +L + C
Sbjct: 3 RSSRPDLAIQFFDWAGE-QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHS---GC 58
Query: 113 GENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
NL F +IR AG+ A++ +++F+V V N L++ L ++ D
Sbjct: 59 SPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVK 118
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG--MVPNLVTHTTIL- 227
+F+N +V P++FT N +I LCK ++E A +L+EM G P++VT+ T++
Sbjct: 119 LFENMESS-RVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN 177
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G GD+E A + + G PD TY ++ GR+ +A +++ M
Sbjct: 178 AGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CS 234
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ VT+ +++ FCK A +L++M + +P +++ LC G+V+ A L
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 294
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI----------PSLLTY 397
+ ++R+ +PD ++++ LCK G+I EA KL E I P L TY
Sbjct: 295 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N ++ G+ + +++A L D+V +G P+V TYN LI G CK +E + +EM
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414
Query: 458 KGCFPNKTSFSLLIEGLYESG 478
GCFPN + ++ GL G
Sbjct: 415 LGCFPNDVTLGSVVFGLCRVG 435
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 212/446 (47%), Gaps = 32/446 (7%)
Query: 47 LVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+ +F+ N D A+++F + + +P+ TY+++I L ++ + LL E+
Sbjct: 103 LIHGLFKDGNPDQAVKLFENMESSRVNPDIF----TYNTVISGLCKSGNLEKARELLEEM 158
Query: 105 -----KQNPEIKCGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
K P+I L N G+ G E A++ ++ V + N++++
Sbjct: 159 IRRGGKSAPDIVTYNTLI-----NAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIH 213
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
AL R + K P++ T N L+ CK + A+ VL+EM ++
Sbjct: 214 ALCVAGRVVEAAEILKT----MSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL 269
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+++T+T ++ G G ++ A + +I+ +G++PD YT L+DG K G + +A K+
Sbjct: 270 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 329
Query: 278 MDEMEDNGV---------EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+ EM + P TY +++ K +A +L+ D++ R YVP
Sbjct: 330 VKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 389
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
+ID LC+ +V +AC+L + C P++ +++ LC+ G++ +A L E R
Sbjct: 390 NTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 449
Query: 389 G-SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
P+++ Y +LI G+C+S + +A + D M +GV + F Y LI G E
Sbjct: 450 KRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAE 509
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEG 473
+ + +EM+ +G P+ ++ L E
Sbjct: 510 AMAMYDEMVARGFLPDGSTSKTLEEA 535
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 174/370 (47%), Gaps = 42/370 (11%)
Query: 127 AGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
+ RP+LA++ F E+ + V S N LL+ LV+ S H+F+
Sbjct: 4 SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVK-------------SGHQFRTG--- 47
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+V ++ G PNLVT ++ G G A
Sbjct: 48 --------------------KVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRA 87
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ + PD + L+ G K G AVK+ + ME + V P+ TY +I CK
Sbjct: 88 LDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGN 147
Query: 306 SGEARNLLDDMLQR--KYVPSSALCCKVIDL-LCEEGKVEDACELWKRLLRKNCMPDNAI 362
+AR LL++M++R K P +I+ +C++G VE+A E+ + PD
Sbjct: 148 LEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVIT 207
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
++IIH LC G++ EA ++ P L+T+NTL+ G C++ L A + ++M
Sbjct: 208 YNSIIHALCVAGRVVEAAEILKTMS--CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 265
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ + P+V TY +L+ G C++G + +LEE++ +G P+ +++ L++GL +SG E
Sbjct: 266 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 325
Query: 483 VGKVVSMATA 492
K+V +A
Sbjct: 326 AHKLVKEMSA 335
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 28/364 (7%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKT 136
TY+SIIH L A R +A E L T + C +L F T++ + AG A++
Sbjct: 207 TYNSIIHALCVAGRVVEAAEILKT-------MSCSPDLVTFNTLLDGFCKAGMLPRALEV 259
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-HLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + N+ V + L+N L + + + +L+ + R + +P+V L+ L
Sbjct: 260 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY--IPDVIAYTSLVDGL 317
Query: 196 CKKDDVEGAIR---------VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
CK ++E A + +L EM S+ MVP L T+ +LGG + G I A + D+
Sbjct: 318 CKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 377
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG+VPD TY L+DG K R+ +A + DEM G PN+VT G ++ C+ +
Sbjct: 378 VARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRV 437
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A +L+ +M ++++ P+ + +ID LC+ +++DAC + + + D+ +
Sbjct: 438 DDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKL 497
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I + G++ EA ++DE RG +P T TL E A ++ + W ++ E
Sbjct: 498 IVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL-----EEAAMSNSVFEWTNLEENAS 552
Query: 426 EPNV 429
V
Sbjct: 553 SDRV 556
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 183/347 (52%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S+ LL ++ + K Y V L F V PNV+T NILI
Sbjct: 49 ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTV-LSLSTQMDSFGVPPNVYTLNILI 107
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + V A VL ++ +G P+ T TT++ G G I A +F ++D G+
Sbjct: 108 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 167
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G + A++++ ME +P+ V Y +I++ CK ++ EA NL
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 227
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M+ + P ++ LC + + L +++ +PD I ST++ LCK
Sbjct: 228 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 287
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK+ EA ++ D +RG P ++TY TL+ G C +E+ EA +++D MV KG P+V +
Sbjct: 288 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 347
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y LI G+CKI + + + EEM K P+ +++ L+ GL G
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVG 394
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 202/396 (51%), Gaps = 4/396 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q V +++++L ++++ +F +
Sbjct: 175 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 234
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P++FT L+ ALC + + +L++M + ++P++V +T++ G +
Sbjct: 235 -GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 293
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + ++ RG PD TYT LMDG+ + +AVKV D M G P+ ++Y +I
Sbjct: 294 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 353
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K +A L ++M +++++P + ++ LC G+++DA L+ ++ + MP
Sbjct: 354 GYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMP 413
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D S ++ LCK + EA L E ++ P + YN +I GMC + EL A L+
Sbjct: 414 DLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 473
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG+ P+V+TYN++I G CK G E ++ EM C P+ +++ + G ++
Sbjct: 474 SNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 533
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLD 513
+++ A G +DS FL+ ++S+ D
Sbjct: 534 NETLRAIQLLEEMLARG-FSADS-CFLMLSVLSEDD 567
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 2/265 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P + L+ K+ + + + +M+ GV PN T +
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + G A ++L +L+ + P +I LC EGK+ +A L+ +++ +
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P+ T+I+ LCK G A +L E+G+ P ++ Y ++I +C+ ++TEA
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ MV +G+ P++FTY L+ C + K +L +M++ P+ FS +++ L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285
Query: 475 YESGNEGEVGKVVSMATASGSVESD 499
+ G E ++V M G VE D
Sbjct: 286 CKEGKVTEAHEIVDMMIQRG-VEPD 309
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 38/259 (14%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T++ + L + AVK F + + V S TL+N + + D +F+
Sbjct: 313 YTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC 372
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT------------ 224
K + +P+ T N L+ LC ++ AI + EM + G +P+LVT++
Sbjct: 373 RK-EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHL 431
Query: 225 -----------------------TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
I+ G G++E A+ +F ++ +G P TY ++
Sbjct: 432 EEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIM 491
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ G K G L +A K+ EM+ N P+ TY + F + ++ A LL++ML R +
Sbjct: 492 IHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
Query: 322 VPSSALCCKVIDLLCEEGK 340
S C ++ +L E+ +
Sbjct: 552 SADS--CFLMLSVLSEDDR 568
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 233/456 (51%), Gaps = 14/456 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N D ALQ F + + F H+ DT+ II L RA + +L ++ + ++ E
Sbjct: 130 RNSDHALQFFRWVERAGL-FRHDRDTHLKIIEILGRASKLNHARCILLDMPKKG-VEWDE 187
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+LF+ +I +YG AG + +VK F ++++ V+R+++S + L +++ RY + F N
Sbjct: 188 DLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYF-N 246
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ V+P T NI+I VE A R +EM + P++VT+ T++ GY
Sbjct: 247 AMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIK 306
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ R P +YT ++ GY+ +GR+ D +++ +EM+ G++PN VTY
Sbjct: 307 KMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYS 366
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C G+K EA+N++ +M++R P +++ ++I C+ G+++ A ++ K ++R
Sbjct: 367 TLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIR 426
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----PSLLT----YNTLIAGM 404
+ + +I CK G A KL D+ I SL YN +I +
Sbjct: 427 LSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYL 486
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C S + ++A L+ +++KGV+ + +N LI+G K G + IL+ M +
Sbjct: 487 CNSGQTSKAETLFRQLMKKGVQDPI-AFNNLIRGHSKEGAPESAFEILKIMGRREVPREA 545
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
++ LLIE + G + + +G + S
Sbjct: 546 DAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSS 581
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 183/450 (40%), Gaps = 61/450 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL------FITVIRNYGLAGRPELA 133
TY+++I+ R + + E E+K G N+ + T+I+ Y GR +
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMK-------GRNIEPTVISYTTMIKGYVSVGRVDDG 346
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF------KVVPNVFT 187
++ F ++ F ++ + + +TLL L ++ + K ++ + + T
Sbjct: 347 LRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLIT 406
Query: 188 CN-----------------------------ILIKALCKKDDVEGAIRVLDEM------- 211
C +LI+ CK + A+++LD++
Sbjct: 407 CQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIIL 466
Query: 212 -PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
P + + I+ G A+ +F ++ +G V D + L+ G+ K G
Sbjct: 467 RPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGA 525
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A +++ M V Y ++IE+F K + +A+ LD M++ ++P S+L
Sbjct: 526 PESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRS 585
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
V++ L E+G+++ A + ++ K + + + I+ L G + EA D G
Sbjct: 586 VMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNG 645
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P ++ L++ +C + A +L D +E+ + +Y ++ G
Sbjct: 646 CEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAY 702
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
IL +++ KG + +S LI L E GN
Sbjct: 703 SILCKIMQKGGATDWSSCKDLIRSLNEEGN 732
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 151/373 (40%), Gaps = 55/373 (14%)
Query: 120 VIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSL-------NTLLNALVQNKRYDLVHLM 171
+I N+ +G + AVK + IEK + R SL N ++ L + + +
Sbjct: 439 LIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETL 498
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F+ K P F N LI+ K+ E A +L M + + ++ ++
Sbjct: 499 FRQLMKKGVQDPIAF--NNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFL 556
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G+ +AK +++ G +PD++ + +M+ + GR+ A +VM+ M + GV+ N
Sbjct: 557 KKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKEN-- 614
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+D L K+++ L G VE+A L
Sbjct: 615 ---------------------MD------------LVAKILEALLLRGHVEEALGRIDLL 641
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAEL 410
+ C PD ++ LC +GK A KL D ER S +Y ++ + + +
Sbjct: 642 MNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKT 698
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD-----KGCFPNKT 465
A + +++KG + + LI+ + GN K+ IL M+ G K
Sbjct: 699 LNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQA-DILSRMIKGEEKVHGSKKGKK 757
Query: 466 SFSLLIEGLYESG 478
S+ I+ ++ SG
Sbjct: 758 QASVSIDKIHVSG 770
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 204/361 (56%), Gaps = 3/361 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+++ Y G + A+ F + K+ + S+RS N+LL+ LV+ L++ R +
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMR-RL 60
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+VP+VFTC I++ A CK VE A+ + EM +G N V++ +++ GYV GDIE A
Sbjct: 61 DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIE 298
K V + ++G + + T T+L+ GY K ++ +A KV+ EME ++GV +E YG +I+
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K G+A + D+ML+ + +C +I+ C+ G+V + L + + + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D+ T++ C++G +A + D+ R I P+++TYNTL+ G+C + +A RLW
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M+++GV PN Y L+ G K+G+ + + +++L +G + +F+ +I GL +
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360
Query: 478 G 478
G
Sbjct: 361 G 361
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 197/442 (44%), Gaps = 80/442 (18%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMF 172
+ T++ Y G A ++ + ++ +V + NTLL L + Y L HLM
Sbjct: 245 YCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLML 304
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ V PN L+ L K D A+ + D++ + G+ ++ T++ G
Sbjct: 305 QRG-----VTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCK 359
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA------------------ 274
G+++ AK F + + G PD TY L DGY K+G + +A
Sbjct: 360 MGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEM 419
Query: 275 -----------------VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ ++ EM+ G+ PN VTYG +I +C + +A + +M+
Sbjct: 420 YNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMI 479
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL-------------------LRK-NC- 356
+ + P+ +C K++ L G++++A L +++ +RK +C
Sbjct: 480 GKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCW 539
Query: 357 --------------MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
+P+N + + + LCK GK+ +A++ F GS P TY TLI
Sbjct: 540 KIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLI 599
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + + EA L D+MV KG+ PN+ TYN L+ G CK G R+ +++ KG
Sbjct: 600 HGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLI 659
Query: 462 PNKTSFSLLIEGLYESGNEGEV 483
PN ++++LI+G +SG+ E
Sbjct: 660 PNVVTYNILIDGYCKSGSPREA 681
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 193/423 (45%), Gaps = 44/423 (10%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL--VQNKRYDLVHLMFKN 174
F T+I G + A +TF R+E+ + + TL + V N
Sbjct: 350 FNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKME 409
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
F P++ N LI L + I +L EM + G+ PN+VT+ ++ G+ +G
Sbjct: 410 KEEIF---PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQG 466
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV------------------- 275
++ A + +++ +G+ P+ + ++ +LGR+ +A
Sbjct: 467 RLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLE 526
Query: 276 -------------KVMDEMEDNGVE---PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
K+ D ++++ ++ PN V Y + + CK K +AR +
Sbjct: 527 DFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHG 586
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P + C +I G V +A L ++ K +P+ + +++ LCK G + A
Sbjct: 587 SFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRA 646
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++LFD+ +G IP+++TYN LI G C+S EA L M+++G+ P++ TY+ LI G
Sbjct: 647 RRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLING 706
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV---VSMATASGS 495
FCK + +E +++L EM +FS L+EG + G+ ++ K+ + MA S
Sbjct: 707 FCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAG 766
Query: 496 VES 498
+ S
Sbjct: 767 ITS 769
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 172/398 (43%), Gaps = 36/398 (9%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +++ Y G E A + + V R+ +L L+ + + + + +
Sbjct: 104 YNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREME 163
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ VV + + LI CK + AIRV DEM +G+ NL +++ GY G +
Sbjct: 164 KEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+R+ + PD+ +Y L+DGY + G + A V D+M G+EP VTY +
Sbjct: 224 HEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTL 283
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++ C+ +A L MLQR P+ C ++D L + G A LW +L +
Sbjct: 284 LKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--------------------GSI----- 391
+T+I+ LCK G++ AK+ F E G++
Sbjct: 344 NKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFK 403
Query: 392 -----------PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
PS+ YN+LI G+ S ++++ L +M +G+ PNV TY LI G+C
Sbjct: 404 IKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWC 463
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G + EM+ KG PN S ++ LY G
Sbjct: 464 DQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLG 501
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 158/327 (48%), Gaps = 37/327 (11%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+++K +K V+ A+ V D M G P+L + ++L V RG+ +A V+ +
Sbjct: 1 MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60
Query: 250 GWVPD-----------------------------------ATTYTVLMDGYIKLGRLTDA 274
VPD A +Y L+DGY+ LG + A
Sbjct: 61 DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC-KVID 333
V+ M + GV N+VT ++I+ +CK K EA +L +M + V +ID
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
C+ GK+ DA + +L+ + + +++I+ CK G++ E ++L + + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+Y TL+ G C ++A + D M+ KG+EP V TYN L++G C+ G+ K+ +R+
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGN 479
ML +G PN+ + L++GL++ G+
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGD 327
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
++ + E+G V++A ++ + + P ++++ L K G+ + A ++D+ R
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61
Query: 391 I-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
I P + T ++ C++ ++ A +M + G E N +YN L+ G+ +G+ +
Sbjct: 62 IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+L+ M +KG NK + +LLI+G + E KV+ V D + +
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAY 175
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 222/450 (49%), Gaps = 23/450 (5%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
+++ LAL+ F +AG F H ++Y I+H + RAR + + E+ N + G
Sbjct: 140 REDPKLALKFFKWAGS-QVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMG 198
Query: 114 E---NLF--ITVIRNYGLAGRP---------------ELAVKTFLRIEKFNVQRSVRSLN 153
N+F + RN ++G E A + F R+ F RS N
Sbjct: 199 FPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCN 258
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
LL+ L ++ LV F N + P+VFT N++I LCK+ D+E + R+ +M
Sbjct: 259 FLLHRLSKSGNGQLVRKFF-NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 317
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
MG+ P++VT+ +++ GY G +E +F ++ D G VPD TY L++ Y K ++
Sbjct: 318 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 377
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A + EM++NG++PN VTY +I+AFCK A L DM + +P+ +ID
Sbjct: 378 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLID 437
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
C+ G + +A +L +L+ + + ++ LCK G++ EA+++F + I P
Sbjct: 438 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ Y L+ G ++ + +A ++ M E ++P++ Y +I G C +E IL
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL 557
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
EEM +G N + +I+ +++G +
Sbjct: 558 EEMKSRGISANPVISTTIIDAYFKAGKSSD 587
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 206/441 (46%), Gaps = 42/441 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I + + + V SL E+K ++ C ++ + +I Y + A + F
Sbjct: 326 TYNSLIDGYGKVGSLEEVASLFNEMK---DVGCVPDIITYNGLINCYCKFEKMPRAFEYF 382
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ ++ +V + +TL++A + +F + R ++PN FT LI A CK
Sbjct: 383 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT-GLLPNEFTYTSLIDANCK 441
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A ++L++M G+ N+VT+T +L G G + A+ VF +L G P+
Sbjct: 442 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 501
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG----------------------- 294
YT L+ GYIK R+ DA+K++ +M + ++P+ + YG
Sbjct: 502 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 561
Query: 295 ------------VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+I+A+ K KS +A N +M + C +ID LC+ G VE
Sbjct: 562 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVE 621
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLI 401
A + + R+L P+ A+ +++I LCK I AKKLFDE + RG P + + LI
Sbjct: 622 LAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALI 681
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + L EA L M E +E ++ Y L+ GF + G + + EM++KG
Sbjct: 682 DGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 741
Query: 462 PNKTSFSLLIEGLYESGNEGE 482
P + L+ Y+ G E
Sbjct: 742 PEEVLCICLLREYYKRGQLDE 762
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 202/416 (48%), Gaps = 9/416 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I L + + L ++++ +P++ +L I YG G E
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL----IDGYGKVGSLEEVASL 346
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + + N L+N + ++ F ++ + PNV T + LI A C
Sbjct: 347 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN-GLKPNVVTYSTLIDAFC 405
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++GAI++ +M G++PN T+T+++ G++ A ++ D+L G +
Sbjct: 406 KEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 465
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+DG K GR+ +A +V M +G+ PN+ Y ++ + K ++ +A +L M
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P L +I C + K+E+ + + + + + IS+TII K GK
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A F E + G +++TY LI G+C++ + A + M+ G++PNV Y L
Sbjct: 586 SDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSL 645
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
I G CK + ++ +EM +G P+ T+F+ LI+G + GN E ++S T
Sbjct: 646 IDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMT 701
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 7/257 (2%)
Query: 245 DILDRGW------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+I D W V + + VL +++LG L +A + M + P + ++
Sbjct: 203 NIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLH 262
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K R +DM+ PS +ID LC+EG +E++ L+ ++ P
Sbjct: 263 RLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSP 322
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I K G + E LF+E + G +P ++TYN LI C+ ++ A +
Sbjct: 323 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 382
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+M G++PNV TY+ LI FCK G + I++ +M G PN+ +++ LI+ ++
Sbjct: 383 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKA 442
Query: 478 GNEGEVGKVVSMATASG 494
GN E K+++ +G
Sbjct: 443 GNLTEAWKLLNDMLQAG 459
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 75 SHNYDTYHSIIHKLARA-RAFDAVESL--LTELKQNPEI---------KCGE------NL 116
S N Y +++H +A R DA++ L +TE P++ C + L
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +++ G++ P + T + F +S +LN F
Sbjct: 556 ILEEMKSRGISANP--VISTTIIDAYFKAGKSSDALN------------------FFQEM 595
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V + T +LI LCK VE A+ M S+G+ PN+ +T+++ G I
Sbjct: 596 QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCI 655
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E+AK++F ++ RG PD T +T L+DG +K G L +A+ ++ M + +E + Y +
Sbjct: 656 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 715
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ F + + +AR ++M+++ +P LC ++ + G++++A EL + R
Sbjct: 716 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
Query: 357 MPDNA 361
+ ++A
Sbjct: 776 ITESA 780
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 153/350 (43%), Gaps = 3/350 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I +A LL ++ Q +K + ++ AGR A +
Sbjct: 428 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQ-AGVKLNIVTYTALLDGLCKAGRMIEAEEV 486
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + K + + + L++ ++ +R + + K + + P++ +I C
Sbjct: 487 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ-MTECNIKPDLILYGSIIWGHC 545
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E +L+EM S G+ N V TTI+ Y G +A F ++ D G
Sbjct: 546 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY VL+DG K G + AV M G++PN Y +I+ CK A+ L D+M
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R P +ID + G +++A L R+ D + ++++ + G++
Sbjct: 666 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 725
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+A+K F+E E+G +P + L+ + +L EA L ++M G+
Sbjct: 726 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 37/247 (14%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y SII R + + +L E+K I + T+I Y AG+ A+ F +
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRG-ISANPVISTTIIDAYFKAGKSSDALNFFQEM 595
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V+ ++ + L++ L + +L F + PNV LI LCK +
Sbjct: 596 QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRML-SLGLQPNVAVYTSLIDGLCKNNC 654
Query: 201 VEGAIRVLDEMPSMGMVPNLVT-----------------------------------HTT 225
+E A ++ DEM GM P++ +T+
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G+ G++ A++ F +++++G +P+ L+ Y K G+L +A+++ +EME G
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774
Query: 286 VEPNEVT 292
+ T
Sbjct: 775 LITESAT 781
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 92/213 (43%), Gaps = 15/213 (7%)
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G +Y +++ + + +A + + +++ + C + D+L
Sbjct: 158 GFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDML--------- 208
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
W R C+ + + + + G + EA + F ++P + N L+
Sbjct: 209 ---WST--RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 263
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ +S + ++DM+ G+ P+VFTYN++I CK G+ + R+ +M + G P+
Sbjct: 264 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 323
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+++ LI+G + G+ EV + + G V
Sbjct: 324 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCV 356
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 249/490 (50%), Gaps = 13/490 (2%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P +L ++ ++ L+IF G + H +D Y+ I+KL F ++ LL +
Sbjct: 79 PVQLCKLLELPLDVPTLLEIFERVGG-QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQ 137
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQN 162
+K+ I E++F+ ++++YG AG+P A++ L + + + + +S + +L LV
Sbjct: 138 MKEEG-IVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTG 196
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ +F + K V P VFT I++KALC ++V+ A +L +M G VPN +
Sbjct: 197 NCPQVATNVFYDMLSK-GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIV 255
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ T++ + + A ++ ++ G +PD T+ ++ G K+ ++ DA K++D M
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G P+ +TYG ++ C+ K EAR +L + P++A+ +I+ G+++
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLK 371
Query: 343 DACE-LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
+A L + ++ PD + ++H LCKEG + A+ L +E RG P+++TY L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G+C++ L EAG + +M +G+ N YN LI C+ + +L EM KGC
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIV--SDLDSGAG 517
P+ +++ LI GL + E ++ G+V ++ ++N L+ ++
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 518 ALDELLVKNC 527
++++L + C
Sbjct: 552 LVNDMLFRGC 561
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 171/387 (44%), Gaps = 45/387 (11%)
Query: 139 RIEKFNVQRSV---------RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
RI K N R + LNTL+N V + + + F P++FT N
Sbjct: 335 RIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYN 394
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
IL+ LCK+ + A +++EM G PN++T+ ++ G G +E A V ++ R
Sbjct: 395 ILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454
Query: 250 GWV-----------------------------------PDATTYTVLMDGYIKLGRLTDA 274
G PD TY L+ G K+ R+ +A
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ M +G N VTY +I A + +A L++DML R +I
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPS 393
C+ G +E EL+++++ D + +I+ LCK GK+ A + D RG +P
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN+++ G+C+ + EA L+D + +GV P+ FTYN I CK G +
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFY 694
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNE 480
++ G P+ ++++L+ L + N+
Sbjct: 695 RGIENGFVPSNLTWNVLVYTLLKQSNQ 721
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 9/334 (2%)
Query: 73 NFSHNYD--TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AG 128
NF D TY+ ++H L + + L+ E+ + C N+ I GL AG
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR---GCEPNVITYAILVNGLCKAG 439
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
E A + + + N L+ AL + ++ + + K P++FT
Sbjct: 440 LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTK-GCKPDLFTY 498
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N LI LCK D ++ A R+ M G V N VT+ T++ + RG + A + D+L
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG D TY L+ + K+G + +++ ++M +G+ + ++ +MI CK K
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L D + R +VP V++ LC+ G++++A L+ RL + PD +T I
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLI 401
W CKEG + +A F E G +PS LT+N L+
Sbjct: 679 WQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 232/484 (47%), Gaps = 57/484 (11%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+I + + DL L+ + + K + + S + + ++H LA A+ + + S L +N
Sbjct: 74 LISSELDPDLCLRYYSWLVK-NSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGS 132
Query: 110 IKCGENLFITV----------------IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
++F + + Y R EL + F R + + S S
Sbjct: 133 DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCK 192
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L+ AL++ R V ++K + K+ PNVFT N++I ALCK + A V+++M
Sbjct: 193 PLMIALLKENRSADVEYVYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKV 251
Query: 214 MGMVPNLVTHTTILGGY-------------------------------------VWRGD- 235
G PN+V++ T++ GY W+ D
Sbjct: 252 YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ + +VF ++LD+ P+ +Y L++G G++++A+ + D+M GV+PN +TY
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FCK EA ++ + + VP++ + +ID C+ GK++D L + + R+
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD + +I LC+ G I AKKLFD+ +P L+T++ L+ G C E +A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAM 491
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGL 474
L +M + G++P TYN++++G+CK GN K + +M ++ N S+++L++G
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 475 YESG 478
+ G
Sbjct: 552 SQKG 555
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 221/455 (48%), Gaps = 38/455 (8%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
L +L FH+ + +PN +Y + +++I L +A+ +D V S+ +++ C +L
Sbjct: 38 LSESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL 97
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+I ++ +P A I K +V + N LL Q +K DL +M
Sbjct: 98 S-ALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMK 156
Query: 173 KN------------------------SRHKFKVV------PNVFTCNILIKALCKKDDVE 202
+N ++ FK + PN T + LI CK DVE
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE 216
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
+L+EM MG+ ++ ++ ++ G+ +GDIE K +F ++L + P+ TY+ LM
Sbjct: 217 EGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLM 276
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ K + +A +++D M V P+ V Y V+ + K ++ +A +LD M++R
Sbjct: 277 NALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEE 336
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P++ +I+ LC+EG+V+DA + + + +K PD ST++ LC GKI EA L
Sbjct: 337 PNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDL 396
Query: 383 FDEFERGSI---PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ P + +N +I +C+ L A R++ MVE+G N+ TYN+LI G+
Sbjct: 397 LNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGY 456
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G + + + ++ +D G PN ++++LI GL
Sbjct: 457 LSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 40/455 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y+++I+ L + + + L E+K E K F +I + G E
Sbjct: 166 SYNTVINGLCKGKRLVEAKELFKEMKGG-ECKPNSVTFSALIDGFCKNGDVEEGFGLLEE 224
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+EK ++ V + L++ + +F N + V PNV T + L+ ALCKK
Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELF-NEMLRKNVTPNVVTYSCLMNALCKKQ 283
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++LD M + P++V +T + G G +A +V ++ RG P+ TY
Sbjct: 284 KWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYN 343
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++G K GR+ DA+ +++ M G +P+ VTY +++ C K EA +LL+ ++ +
Sbjct: 344 AIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK 403
Query: 320 KY------------------------------------VPSSALCCKV-IDLLCEEGKVE 342
++ PS+ + + ID GK+
Sbjct: 404 EFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLT 463
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLI 401
A ELWK + P+ A + +I+ LCK + AK LF++ G+ P++ YNTL+
Sbjct: 464 KALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLM 523
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
A +C + + +A L+ +M +P+V ++N++I G K G+ + +L EML+
Sbjct: 524 ASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLV 583
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
P+ +FS+LI + G E + + G V
Sbjct: 584 PDNITFSILINRFLKLGQLDEAASLYERMVSCGHV 618
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P+ +CN LI L K + I V +M S+ + P + + ++ +V A
Sbjct: 56 IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
V G I+ RG+ + + +L+ G+ + G A+ + M+ N + P+ V+Y +I C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
KGK+ EA+ L +M + P+S +ID C+ G VE+ L + + + D
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ S +I C +G I K+LF+E R ++ P+++TY+ L+ +C+ + EA ++ D M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN- 479
V P+V Y +L G K G A + I++L+ M+ +G PN +++ +I GL + G
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355
Query: 480 EGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
+ +G + +MA + +++ L+ + G G +DE
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLC-----GVGKIDE 392
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 165/342 (48%), Gaps = 14/342 (4%)
Query: 91 ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRS 148
RA DA++ L +K+ E N+ I N GL GR + A+ + K +
Sbjct: 318 GRASDAIKVLDLMVKRGEE---PNNVTYNAIIN-GLCKEGRVDDALGILETMAKKGKKPD 373
Query: 149 VRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V + +TL+ L ++ DL++L+ +F + P+VF N++I+ LCK+ + A
Sbjct: 374 VVTYSTLVKGLCGVGKIDEAVDLLNLLMSK---EFHIKPDVFAFNLVIQELCKQRRLRHA 430
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
RV M G N+VT+ ++ GY+ G + A ++ D +D G P+A TYTVL++G
Sbjct: 431 KRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLING 490
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K+ L+ A + ++ +G P Y ++ + C+ +ARNL +M + P
Sbjct: 491 LCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPD 550
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ID + G VE A EL +L N +PDN S +I+ K G++ EA L++
Sbjct: 551 VVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYE 610
Query: 385 EFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
G +P + +++L+ G + + + M +K V
Sbjct: 611 RMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 162/351 (46%), Gaps = 43/351 (12%)
Query: 77 NYDTYHSIIHKLAR-ARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPELA 133
N TY++II+ L + R DA+ L T K+ P++ + T+++ G+ + A
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT----YSTLVKGLCGVGKIDEA 393
Query: 134 VK--TFLRIEKFNVQRSVRSLNTLLNALVQNKR--------YDLVHLMFKNSRHKFKVV- 182
V L ++F+++ V + N ++ L + +R Y +V F ++ + ++
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453
Query: 183 -------------------------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
PN T +LI LCK + A + ++ + G
Sbjct: 454 DGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTR 513
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P + + T++ +E A+ +F ++ + PD ++ +++DG +K G + A ++
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKEL 573
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+ EM + + P+ +T+ ++I F K + EA +L + M+ +VP + L ++
Sbjct: 574 LLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSL 633
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
+GK E + +++ K+ + D+ ++STI+ LC K + +K+ +F +
Sbjct: 634 KGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQ 684
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 205/369 (55%), Gaps = 4/369 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F H+Y +Y S+I+KLAR+R F+AVE++L L+ N I+C E LF+ +I++YG A E
Sbjct: 77 FKHHYPSYSSLIYKLARSRRFEAVETILGHLR-NRNIRCNETLFVALIQHYGKAHLVEKG 135
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ F ++ FN R+++S N LLN LV ++ +F+ + ++ PN + NI+IK
Sbjct: 136 IELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQA-YEMDFRPNSVSYNIMIK 194
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
KK E A + DEM G+ P++VT+ + LG +G+++ A +F ++ ++G P
Sbjct: 195 GWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHP 254
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+A TY +LM+G+ +G+ +A K+M +ME +G + V YGV++ K E +LL
Sbjct: 255 NAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLL 314
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++M +R+ P +++ LC+EGKV DA ++ ++ C P+ A +I C
Sbjct: 315 NEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNA 374
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTE-AGRLWDDMVEKGVEPNVFT 431
G A K+ + G P L T+ +L+ G+ + + + ++M ++ + + T
Sbjct: 375 GDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAET 434
Query: 432 YNMLIQGFC 440
+ +LI C
Sbjct: 435 WRILIMDVC 443
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 184/398 (46%), Gaps = 6/398 (1%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTC 188
P A+ F + + S ++L+ L +++R++ V + + R++ + +F
Sbjct: 62 PCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVA 121
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K VE I + +MPS L + +L V A +F +
Sbjct: 122 --LIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYE 179
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+ P++ +Y +++ G+IK G A + DEM + GV+P+ VTY + C+ +
Sbjct: 180 MDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDT 239
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L +M ++ + P++ +++ C GK ++A +L + C ++
Sbjct: 240 ALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMT 299
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G I E + L +E ++ + P ++TYN L+ +C+ ++ +A ++ M G +P
Sbjct: 300 HLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDP 359
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TY M+I G+C G+ ++IL ML G +P+ +F+ L+ GL + N + V
Sbjct: 360 NAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFV 419
Query: 488 --SMATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
M ++++W L+ + L++L+
Sbjct: 420 LEEMEKRQLRFDAETWRILIMDVCGQHVEIGSHLNDLI 457
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 180/327 (55%), Gaps = 1/327 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N+L+ +CK+ ++ AI+ L+ MPS G PN++TH IL G +A+++
Sbjct: 49 PDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKL 108
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ +G P T+ +L++ + G L A+ ++++M +G PN ++Y ++ FCK
Sbjct: 109 LTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCK 168
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
KK A L+ M+ R P ++ LC++GKV+ A EL +L K C P
Sbjct: 169 EKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 228
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I L K GK +A +L E +G P ++TY++LIAG+ ++ EA + + D+
Sbjct: 229 YNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
GV+PN FTYN ++ G CK I L M+ KGC P + S+++LIEG+ G
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAK 348
Query: 482 EVGKVVSMATASGSVESDSWNFLLTRI 508
E ++++ + G V+ S ++ R+
Sbjct: 349 EALELLNELCSRGVVKKSSAEQVVVRL 375
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 1/282 (0%)
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ VLD P+++T+T ++ + A ++ ++ RG PD TY VL++G
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K GRL +A+K ++ M G +PN +T+ +++ + C + +A LL +M+++ PS
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+I+ LC +G + A ++ +++ C P++ + ++H CKE K+ A + +
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180
Query: 385 -EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
RG P ++TYNT++ +C+ ++ A L + + KG P + TYN +I G K+G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+ + +L EM KG P+ ++S LI GL G E K
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIK 282
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 161/324 (49%), Gaps = 2/324 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V + N L+N + + R D + F NS + PNV T NI+++++C A ++L
Sbjct: 51 VVTYNVLVNGMCKEGRLDEA-IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLL 109
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
EM G P++VT ++ +G + A + + G P++ +Y L+ G+ K
Sbjct: 110 TEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKE 169
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
++ A++ ++ M G P+ VTY M+ A CK K A LL+ + + P
Sbjct: 170 KKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITY 229
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
VID L + GK + A EL + K PD S++I L +EGK+ EA K F + E
Sbjct: 230 NTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEG 289
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P+ TYN+++ G+C++ + A M+ KG +P +Y +LI+G G AKE
Sbjct: 290 FGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKE 349
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+ +L E+ +G ++ +++
Sbjct: 350 ALELLNELCSRGVVKKSSAEQVVV 373
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
E+ R L K C PD + +I C E + +A KL DE RG P ++TYN L+ GM
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ L EA + + M G +PNV T+N++++ C G + ++L EM+ KGC P+
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121
Query: 465 TSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLL 505
+F++LI L G G ++ M T + S S+N LL
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 205/407 (50%), Gaps = 45/407 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+++S+I + + F ++E LL ++K + E FI + + YG A P+ A+ F R
Sbjct: 67 SFYSLIENFSNSLDFTSLEQLLHQMKCENRVFI-EKSFIIMFKAYGKAHLPQKALDLFHR 125
Query: 140 I-EKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLMFKNSRHKFKVVPNVFTCNILIK 193
+ +F+ +++V+S NT+LN ++Q +DL H++ NS + PN + N++IK
Sbjct: 126 MGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQ--PNGLSFNLVIK 183
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
ALC+ G+++ A VF + DR V
Sbjct: 184 ALCR-----------------------------------VGNVDQAVEVFRGMSDRNCVA 208
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY+ LM G GR+ +AV ++DEM+ G PN V + V+I A CK A L+
Sbjct: 209 DGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLV 268
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M + VP+ ++ LC +GK++ A L R++ C+P++ T++ K
Sbjct: 269 DNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKH 328
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G+ + ++ E+G + +Y++LI+G+ + + +LW +MVEKG +PN Y
Sbjct: 329 GRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVY 388
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ LI G C+ G E L EM +KG PN ++S L+ G +E+G+
Sbjct: 389 SALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGD 435
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 166/358 (46%), Gaps = 10/358 (2%)
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVF---TCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L++N L + H+ K VF + I+ KA K + A+ + M +
Sbjct: 70 SLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAE 129
Query: 215 GMVPNLV-THTTILGGYVWRGDIENAKRVFGDILDRGWV----PDATTYTVLMDGYIKLG 269
V + T+L + G + A + ++D P+ ++ +++ ++G
Sbjct: 130 FHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVG 189
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ AV+V M D + TY ++ C + EA +LLD+M P+
Sbjct: 190 NVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFN 249
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I LC++G + A +L + K C+P+ ++++H LC +GK+ +A L +
Sbjct: 250 VLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVAN 309
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+P+ +T+ TL+ G + + R+ + EKG N F+Y+ LI G K G + G
Sbjct: 310 KCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHG 369
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK-VVSMATASGSVESDSWNFLL 505
+++ +EM++KGC PN +S LI+GL G E + ++ M + S +++ L+
Sbjct: 370 MQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLM 427
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 182/437 (41%), Gaps = 77/437 (17%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L ++ + R N+D A+++F G N + TY +++H L D
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFR--GMSDRNCVADGYTYSTLMHGLCNEGRIDEAV 230
Query: 99 SLLTELK-----QNP------------------EIKCGENLFI-----------TVIRNY 124
SLL E++ NP K +N+F+ +++
Sbjct: 231 SLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGL 290
Query: 125 GLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVP 183
L G+ + A+ R+ + + TL++ V++ R D V ++ ++
Sbjct: 291 CLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYR--G 348
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N F+ + LI L K+ E +++ EM G PN + ++ ++ G G + AK
Sbjct: 349 NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYL 408
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ ++G P++ TY+ LM GY + G + A+ V EM DN +EV Y ++I CK
Sbjct: 409 IEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKN 468
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
GK+++A +WK++L + D
Sbjct: 469 -----------------------------------GKLKEALIVWKQMLSRGIKLDVVAY 493
Query: 364 STIIHWLCKEGKIWEAKKLFDEF---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S++IH C + + KLF++ P ++TYN L+ C ++ A + + M
Sbjct: 494 SSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTM 553
Query: 421 VEKGVEPNVFTYNMLIQ 437
+++G +P+ T ++ ++
Sbjct: 554 LDQGCDPDFITCDIFLK 570
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL- 247
+ILI LCK ++ A+ V +M S G+ ++V +++++ G+ +E ++F +L
Sbjct: 459 SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLC 518
Query: 248 -DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF------ 300
+ PD TY +L++ + ++ A+ +++ M D G +P+ +T + ++
Sbjct: 519 HNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDP 578
Query: 301 ---------------CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
K +++ A N+++ MLQ+ +P + + LC+ KV
Sbjct: 579 PQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKV 634
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 224/488 (45%), Gaps = 54/488 (11%)
Query: 20 GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD 79
GGA CS + T I + F++ +++ A +F +
Sbjct: 215 GGAVCSPDVVAYTTVIDCF-------------FKEGDVNKACDLFKEM--VQRGIPPDLV 259
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++H L +ARA E+ L ++ N + + +I Y G+ + AV+ F
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQM-VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 318
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ RH ++P+V T N+L+ +LCK
Sbjct: 319 MR----------------------------------RHS--ILPDVVTLNMLMGSLCKYG 342
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G P++ ++ +L GY +G + + +F +L G PD T++
Sbjct: 343 KIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFS 402
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+P+ VTY +I A C+ K +A + M+ +
Sbjct: 403 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ 462
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I C G + A EL ++ D S+II+ LCK G+I +A
Sbjct: 463 GVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDA 522
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P + Y+ L+ G C ++ +A R++D MV G+EPNV Y L+ G
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNG 582
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVE 497
+CKIG EG+ + EML KG P+ ++++I+GL+ +G T SG ++
Sbjct: 583 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAIN 642
Query: 498 SDSWNFLL 505
++N +L
Sbjct: 643 KCTYNIVL 650
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 176/356 (49%), Gaps = 3/356 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ + N LL + KR D + + + VP+VF
Sbjct: 128 AHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF 187
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ +IL+K+LC + A +L M G V P++V +TT++ + GD+ A +F
Sbjct: 188 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFK 247
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY+ ++ K + A + +M + GV P+ TY +I +
Sbjct: 248 EMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 307
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M + +P ++ LC+ GK+++A +++ + K PD
Sbjct: 308 QWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYK 367
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P + T++ LI L +A ++++M +
Sbjct: 368 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDH 427
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
GV+P+V TY +I C+IG + + +M+D+G P+K ++ LI+G G+
Sbjct: 428 GVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 151/316 (47%), Gaps = 2/316 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ V + T++ AL + + D F N
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF-NQM 459
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V P+ + + LI+ C + A ++ E+ + GM ++V ++I+ G I
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G PDA Y++LMDGY +G++ A++V D M G+EPN V YG +
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTL 579
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQ+ PS+ L +ID L G+ A + +
Sbjct: 580 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGI 639
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
+ + ++ K EA LF E ++ ++T NT+IAGM ++ + EA
Sbjct: 640 AINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 699
Query: 416 LWDDMVEKGVEPNVFT 431
L+ + G+ P V T
Sbjct: 700 LFASISRSGLVPCVVT 715
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 11/265 (4%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ + + +++ FC+ K++ E
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC++GK A +L + + C PD
Sbjct: 169 A---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 225
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I KEG + +A LF E +RG P L+TY++++ +C++ + +A MV
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV 285
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KGV P+ +TYN LI G+ G KE +R+ +EM P+ + ++L+ L + G
Sbjct: 286 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345
Query: 482 EVGKVV-SMATASGSVESDSWNFLL 505
E V +MA + + S+ +L
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIML 370
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 127/284 (44%), Gaps = 12/284 (4%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY ++I L R + DA+E + Q + + + +I+ + G A + L
Sbjct: 435 TYTTVIAALCRIGKMDDAMEKFNQMIDQG--VAPDKYAYHCLIQGFCTHGSLLKAKELIL 492
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
I ++ + ++++N L + R ++ L +H P+ ++L+
Sbjct: 493 EIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQH-----PDAVVYSMLMDG 547
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
C +E A+RV D M S G+ PN+V + T++ GY G I+ +F ++L +G P
Sbjct: 548 YCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 607
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y +++DG GR A EM ++G+ N+ TY +++ F K + EA L
Sbjct: 608 TILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFK 667
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
++ +I + + +VE+A +L+ + R +P
Sbjct: 668 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 200/396 (50%), Gaps = 48/396 (12%)
Query: 121 IRNYGLAGRPELAVKTFLR------IEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+R YG++ PE R ++ F +++ S N LL AL R H +F
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLF 276
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM---------------- 216
+ P+V T I++ C ++E AI++L EM + G+
Sbjct: 277 D----EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332
Query: 217 ----------VPNLVTH---------TTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V ++V H TT++ G+ +GD+ A+ F ++ RG D T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT L++G + G L +A +V+ EMED G++ + VTY V+I+ +CK K EA + + M+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q++ P+ + D LC++G V A EL + K + +++I+ LCK G +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 378 EA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A + + D E G P + TY T+I +C+S EL A L +M++KG++P + TYN+L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
GFC G + G R+LE ML+K PN T+++ L++
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 214/452 (47%), Gaps = 15/452 (3%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
LD A+Q+F + N +Y+ ++ L A L E+ P++
Sbjct: 238 LDEAVQLFQELPE------KNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVT---- 287
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNS 175
+ ++ Y E A+K + ++ + + +++ L + + D V ++
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
H + VFT ++ C+K D+ A DEM G+ + VT+T ++ G G+
Sbjct: 348 MHGVVLDAAVFT--TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A+RV ++ D+G DA TYTVL+DGY K+G++T+A V ++M V PN VTY
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ + CK A LL +M + + +I+ LC+ G +E A +
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +TII LC+ ++ A L E ++G P+++TYN L+ G C S +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
RL + M+EK + PN TYN L++ +C N K I + ML + PN+ ++++LI+G
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
++ N E S G + + S+N L+
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 136/269 (50%), Gaps = 7/269 (2%)
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
LVH N + +V PNV T L LCK+ DV A +L EM S G+ N+ T+ ++
Sbjct: 446 LVH----NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G G++E A R D+ + G PD TYT ++ + L A ++ EM D G+
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+P VTY V++ FC + + LL+ ML++ P++ ++ C E ++ E
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
++K +L + +P+ + +I CK + EA E E+G + +YN LI +
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681
Query: 406 ESAELTEAGRLWDDMVEK--GVEPNVFTY 432
+ + TEA RL++ M ++ EP+V+ +
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNF 710
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 10/313 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I+ L RA E +L E+ ++ + + +I Y G+ A +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEM-EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 140 IEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + V +V + L + L + +L+H M + N+FT N LI L
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG-----LELNIFTYNSLINGL 505
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++E A+R + +M G+ P++ T+TTI+G +++ A + ++LD+G P
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY VLM+G+ GR+ ++++ M + + PN TY +++ +C K +
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML ++ VP+ +I C+ +++A ++ K + + +I L K+ K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 376 IWEAKKLFDEFER 388
EA++LF++ +
Sbjct: 686 FTEARRLFEKMRK 698
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 190/354 (53%), Gaps = 2/354 (0%)
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
RN L + + AV F + K S+ + LL+A+ + K++DLV + F V
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLV-ISFGEKMEILGV 96
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
N++T NI+I LC++ + A+ +L +M +G P++VT ++L G+ I A
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ +++ G+ PD T+T L+ G + + ++AV +++ M G +P+ VTYG +I C
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + A NLL+ M + K + VID LC+ V+DA L+ + K PD
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 362 ISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S++I LC G+ +A +L D ER P+++T+N+LI + +L EA +L+D+M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+++ ++PN+ TYN LI GFC E +I M+ K C P+ +++ LI G
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 229/450 (50%), Gaps = 17/450 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHP-NFSHNYDTYHSIIHKLARARAF 94
+P+P + +L+S I + + DL + + K SHN TY+ +I+ L R
Sbjct: 60 RPFPSIVEFSKLLSAIAKMKKFDL---VISFGEKMEILGVSHNLYTYNIMINCLCRRSQL 116
Query: 95 D---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
A+ + +L P I +L + + R AV ++ + Q +
Sbjct: 117 SFALAILGKMMKLGYGPSIVTLNSL----LNGFCHGNRISEAVALVDQMVEMGYQPDTVT 172
Query: 152 LNTLLNALVQ-NKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVLD 209
TL++ L Q NK + V L+ R K P++ T +I LCK+ + + A+ +L+
Sbjct: 173 FTTLVHGLFQHNKASEAVALV---ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + ++V ++T++ +++A +F ++ ++G PD TY+ L+ G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +DA +++ +M + + PN VT+ +I+AF K K EA L D+M+QR P+
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFER 388
+I+ C ++++A +++ ++ K+C+PD +T+I+ CK K+ + +LF D R
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G + + +TY TLI G ++++ A ++ MV GV PN+ TYN L+ G CK G ++
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + E + P+ +++++ EG+ ++G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 218/443 (49%), Gaps = 13/443 (2%)
Query: 80 TYHSIIHKLAR----ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
T+ +++H L + + A VE ++ + Q + G VI G P+LA+
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG-----AVINGLCKRGEPDLALN 226
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++EK ++ V +T++++L + + D +F +K + P+VFT + LI L
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLISCL 285
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C A R+L +M + PN+VT +++ + G + A+++F +++ R P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L++G+ RL +A ++ M P+ VTY +I FCK KK + L D
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M +R V ++ +I + ++A ++K+++ P+ +T++ LCK GK
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A +F+ ++ + P + TYN + GMC++ ++ + L+ + KGV+P+V YN
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+I GFCK G +E + +M + G P+ +++ LI G++ +++ +
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 495 SVESDSWNFLLTRIVSD--LDSG 515
S L+T ++ D LD G
Sbjct: 586 FAGDASTYGLVTDMLHDGRLDKG 608
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 36/156 (23%)
Query: 375 KIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ EA LF E + PS++ ++ L++ + + + + M GV N++TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 434 MLI-----------------------------------QGFCKIGNAKEGIRILEEMLDK 458
++I GFC E + ++++M++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P+ +F+ L+ GL++ E +V G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 200/396 (50%), Gaps = 48/396 (12%)
Query: 121 IRNYGLAGRPELAVKTFLR------IEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+R YG++ PE R ++ F +++ S N LL AL R H +F
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLF 276
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM---------------- 216
+ P+V T I++ C ++E AI++L EM + G+
Sbjct: 277 D----EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332
Query: 217 ----------VPNLVTH---------TTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V ++V H TT++ G+ +GD+ A+ F ++ RG D T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT L++G + G L +A +V+ EMED G++ + VTY V+I+ +CK K EA + + M+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q++ P+ + D LC++G V A EL + K + +++I+ LCK G +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 378 EA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A + + D E G P + TY T+I +C+S EL A L +M++KG++P + TYN+L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
GFC G + G R+LE ML+K PN T+++ L++
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 214/452 (47%), Gaps = 15/452 (3%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
LD A+Q+F + N +Y+ ++ L A L E+ P++
Sbjct: 238 LDEAVQLFQELPE------KNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVT---- 287
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNS 175
+ ++ Y E A+K + ++ + + +++ L + + D V ++
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
H + VFT ++ C+K D+ A DEM G+ + VT+T ++ G G+
Sbjct: 348 MHGVVLDAAVFT--TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A+RV ++ D+G DA TYTVL+DGY K+G++T+A V ++M V PN VTY
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ + CK A LL +M + + +I+ LC+ G +E A +
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +TII LC+ ++ A L E ++G P+++TYN L+ G C S +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
RL + M+EK + PN TYN L++ +C N K I + ML + PN+ ++++LI+G
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
++ N E S G + + S+N L+
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+ N + +V PNV T L LCK+ DV A +L EM S G+ N+ T+ +++ G
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G++E A R D+ + G PD TYT ++ + L A ++ EM D G++P
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VTY V++ FC + + LL+ ML++ P++ ++ C E ++ E++K
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+L + +P+ + +I CK + EA E E+G + +YN LI + +
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 409 ELTEAGRLWDDMVEK--GVEPNVFTY 432
+ TEA RL++ M + EP+V+ +
Sbjct: 685 KFTEARRLFEKMRKDRLTAEPDVYNF 710
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 160/348 (45%), Gaps = 11/348 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I+ L RA E +L E+ ++ + + +I Y G+ A +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEM-EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 140 IEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + V +V + L + L + +L+H M + N+FT N LI L
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG-----LELNIFTYNSLINGL 505
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++E A+R + +M G+ P++ T+TTI+G +++ A + ++LD+G P
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY VLM+G+ GR+ ++++ M + + PN TY +++ +C K +
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML ++ VP+ +I C+ +++A ++ K + + +I L K+ K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 376 IWEAKKLFDEFERGSIPSLL-TYNTLIAGMCESAELTEAGRLWDDMVE 422
EA++LF++ + + + YN I L L D++VE
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 195/400 (48%), Gaps = 38/400 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++H L +ARA D E+ L ++ N + + +I Y G+ + AV+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQM-VNKGVLPDNWTYNNLIYGYSSTGQWKEAVR---- 312
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+FK R + ++P+V N L+ +LCK
Sbjct: 313 -------------------------------VFKEMRRQ-SILPDVVALNTLMGSLCKYG 340
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G P++ ++T +L GY +G + + +F +L G P T+
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFN 400
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+P+ VTY +I A C+ K +A + M+ +
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP +I C G + A EL ++ D +II+ LCK G++ +A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P + YN L+ G C ++ +A R++D MV G+EPNV Y L+ G
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CKIG EG+ + EML KG P+ ++++I+GL+E+G
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 182/365 (49%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ + LL + KR D + + + VP+VF
Sbjct: 126 AHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF 185
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ NIL+K+LC + A +L M G V P++V + T++ G+ GD+ A +F
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY+ ++ K + A + +M + GV P+ TY +I +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M ++ +P ++ LC+ GK+++A +++ + K PD +
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P + T+N LI L +A ++++M +
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+P+V TY +I C+IG + + +M+D+G P+K ++ LI+G G+ +
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 484 GKVVS 488
+++S
Sbjct: 486 KELIS 490
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 14/410 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ V + T++ AL + + D F N
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF-NQM 457
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
VVP+ + + LI+ C + A ++ E+ + GM ++V +I+ G +
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G PDA Y +LMDGY +G++ A++V D M G+EPN V YG +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQ+ PS+ L +ID L E G+ A + +
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
+ S ++ L K EA LF E ++ ++T NT+IAGM ++ + EA
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + G+ P TY+++I K G +E + M + GC P+ + ++ L
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS----DLDSGAGALDE 521
+ G +S + D NF L + + DL S G E
Sbjct: 758 KKNEIVRAGAYLS--------KIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ + + +++ FC+ K++ E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC +GK A +L + + C PD
Sbjct: 167 A---LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVA 223
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I KEG + +A LF E +RG P L+TY++++ +C++ + +A MV
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KGV P+ +TYN LI G+ G KE +R+ +EM + P+ + + L+ L + G
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 482 EVGKVV-SMATASGSVESDSWNFLL 505
E V +MA + + S+ +L
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIML 368
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 200/396 (50%), Gaps = 48/396 (12%)
Query: 121 IRNYGLAGRPELAVKTFLR------IEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+R YG++ PE R ++ F +++ S N LL AL R H +F
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLF 276
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM---------------- 216
+ P+V T I++ C ++E AI++L EM + G+
Sbjct: 277 D----EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332
Query: 217 ----------VPNLVTH---------TTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V ++V H TT++ G+ +GD+ A+ F ++ RG D T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT L++G + G L +A +V+ EMED G++ + VTY V+I+ +CK K EA + + M+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q++ P+ + D LC++G V A EL + K + +++I+ LCK G +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 378 EA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A + + D E G P + TY T+I +C+S EL A L +M++KG++P + TYN+L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
GFC G + G R+LE ML+K PN T+++ L++
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 214/452 (47%), Gaps = 15/452 (3%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
LD A+Q+F + N +Y+ ++ L A L E+ P++
Sbjct: 238 LDEAVQLFQELPE------KNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVT---- 287
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNS 175
+ ++ Y E A+K + ++ + + +++ L + + D V ++
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
H + VFT ++ C+K D+ A DEM G+ + VT+T ++ G G+
Sbjct: 348 MHGVVLDAAVFT--TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A+RV ++ D+G DA TYTVL+DGY K+G++T+A V ++M V PN VTY
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ + CK A LL +M + + +I+ LC+ G +E A +
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +TII LC+ ++ A L E ++G P+++TYN L+ G C S +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
RL + M+EK + PN TYN L++ +C N K I + ML + PN+ ++++LI+G
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
++ N E S G + + S+N L+
Sbjct: 646 CKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 3/266 (1%)
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+ N + +V PNV T L LCK+ DV A +L EM S G+ N+ T+ +++ G
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G++E A R D+ + G PD TYT ++ + L A ++ EM D G++P
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VTY V++ FC + + LL+ ML++ P++ ++ C E ++ E++K
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+L + +P+ + +I CK + EA E E+G + +YN LI + +
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 409 ELTEAGRLWDDMVEK--GVEPNVFTY 432
+ TEA RL++ M ++ EP+V+ +
Sbjct: 685 KFTEARRLFEKMRKERLTAEPDVYNF 710
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 10/313 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I+ L RA E +L E+ ++ + + +I Y G+ A +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEM-EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 140 IEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + V +V + L + L + +L+H M + N+FT N LI L
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG-----LELNIFTYNSLINGL 505
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++E A+R + +M G+ P++ T+TTI+G +++ A + ++LD+G P
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY VLM+G+ GR+ ++++ M + + PN TY +++ +C K +
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML ++ VP+ +I C+ +++A ++ K + + +I L K+ K
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 376 IWEAKKLFDEFER 388
EA++LF++ +
Sbjct: 686 FTEARRLFEKMRK 698
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 202/371 (54%), Gaps = 14/371 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLM 171
+ T+I+ + R A F+ ++K + + TL+ L Q ++ ++
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
R+ K P + + +I+I LCK + A + +EM + G++P+++++TT++ G+
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC 504
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G E AK +F ++LD G PD TT +VL+D K G++ +A K+++ + G + V
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T +++ C + +A L M + +P+ C ++ LC+ G ++ A EL K +
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624
Query: 352 LRK------NCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
L NC P NAIS S II LCK G+ EA++LF E + G IP +++Y +LI G
Sbjct: 625 LSDTSPYGINCKP-NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C S + +A L+++MV+ GV+P+V T+++LI CK G E +LE M+ +GC PN
Sbjct: 684 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 743
Query: 464 KTSFSLLIEGL 474
+++ L++GL
Sbjct: 744 TVTYTTLVKGL 754
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 237/495 (47%), Gaps = 58/495 (11%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQI----FHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P + L+ + + N+++ALQ+ + G++ +Y II L + R
Sbjct: 415 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 474
Query: 95 DAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
D L E+K P++ + T+I + L+G+ E A F + +Q V +
Sbjct: 475 DEARELFEEMKAQGIMPDVIS----YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530
Query: 152 LNTLLNALVQ-------NKRYDLV----------------------HLMFKNSR-----H 177
+ L++ L + NK ++V H + K ++
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS------MGMVPNLVTHTTILGGYV 231
K +PNV TC L+K LC+ +++ A+ + M S + PN ++++ I+ G
Sbjct: 591 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 650
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G + A+ +F ++ G +PD +YT L+ G+ + G+ DA + +EM D GV+P+
Sbjct: 651 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 710
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T+ V+I+ CK K EA LL+ M+QR +P++ ++ LC ++ +A +L+ ++
Sbjct: 711 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 770
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEA-----KKLFDEFERGS--IPSLLTYNTLIAGM 404
+ C+PD T++ LC+ G I A K L D + G+ P +++Y+ +I G+
Sbjct: 771 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 830
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ EA L+ +M GV PNV +Y LI GFC+ G ++ + EM+D+G N
Sbjct: 831 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNA 890
Query: 465 TSFSLLIEGLYESGN 479
++S++I G + G
Sbjct: 891 VTYSVMIHGFCKEGQ 905
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 201/397 (50%), Gaps = 19/397 (4%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLM 171
+ T+I+ + R A F+ ++K + + TL+ L Q ++ ++
Sbjct: 92 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 151
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
R+ K P + + +I+I LCK + A + EM + GM+P+++++T+++ G+
Sbjct: 152 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC 211
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G E AK +F ++LD G PD TT VL+D + K G++ +A ++++ M G + V
Sbjct: 212 HSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIV 271
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +I+ C + EA L M + P + ++ LC+ GK+ A L + +
Sbjct: 272 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331
Query: 352 LR-------KNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAG 403
L K PD SS +I LCKEGK+ EA +L + +RG I ++TY+TLI G
Sbjct: 332 LNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML-DKG--- 459
+C ++EA L+ M + G P+ TY L++G C+ GN +++ +EML D G
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451
Query: 460 --CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
C P S+S++I+GL + E E ++ A G
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQG 488
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 214/435 (49%), Gaps = 19/435 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPE---IKCGENLFITVIRNYGLAG--RPELAV 134
TY +++ L + + L E+ + IKC L I GL R + A
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F ++ + V S TL++ + +++ +F N + P+V T ++LI
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF-NEMLDVGIQPDVTTSSVLIDM 537
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCKK V A ++L+ + G + ++VT TT++ G + I A ++F + G +P+
Sbjct: 538 LCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPN 597
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDN------GVEPNEVTYGVMIEAFCKGKKSGE 308
T LM G + G + A+++ M + +PN ++Y ++I+ CK + E
Sbjct: 598 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 657
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
AR L +M +P +I C GK +DA L+ ++ PD S +I
Sbjct: 658 ARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 717
Query: 369 WLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCKEGK+ EA +L + +RG IP+ +TY TL+ G+C + ++EA +L+ M + G P
Sbjct: 718 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 777
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEML-DKGCF-----PNKTSFSLLIEGLYESGNEG 481
+V TY L++G C+ GN K + + ++ML D G + P+ S+S++I+GL + G E
Sbjct: 778 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 837
Query: 482 EVGKVVSMATASGSV 496
E ++ A G +
Sbjct: 838 EARELFKEMKALGVI 852
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 182/361 (50%), Gaps = 14/361 (3%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + +TL+ L R +F S K P+ T L+K LC+ ++ A+++
Sbjct: 382 IVTYSTLIKGLCMEHRISEATWLFM-SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 440
Query: 209 DEMPS------MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
EM + + P L++++ I+ G + A+ +F ++ +G +PD +YT L+
Sbjct: 441 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLI 500
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
G+ G+ A + +EM D G++P+ T V+I+ CK K EA LL+ ++QR +
Sbjct: 501 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 560
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
C ++ LC + ++ A +L+ ++ + CMP+ +T++ LC+ G I A +L
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620
Query: 383 FDE-------FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ P+ ++Y+ +I G+C+ EA L+ +M GV P+V +Y L
Sbjct: 621 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 680
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I GFC+ G K+ + EM+D G P+ T+FS+LI+ L + G E +++ + G
Sbjct: 681 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 740
Query: 496 V 496
+
Sbjct: 741 I 741
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 167/332 (50%), Gaps = 14/332 (4%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ + P+V T ++LI LCK+ V A +L+ M G + ++VT++T++ G I
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNG-----VEPNEVT 292
A +F + G PDA TY LM G + G + A+++ EM D G +P ++
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 167
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++I+ CK ++ EAR L +M + +P +I C GK E A L+ +L
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
PD S +I CKEGK+ EA +L + RG I ++TY+TLI G+C ++
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRIS 287
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD-------KGCFPNK 464
EA +L+ M + G P+ Y L++G C+ G + + +EML+ K P+
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
T+ S+LI+ L + G E +++ + G +
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCI 379
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 33/299 (11%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ FT NILI LC V + + + G +P++VT++
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI----------------- 50
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
PD TT ++L+D K G++ +A ++++ M G + VTY +I+ C
Sbjct: 51 ---------RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 101
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN------C 356
+ EA L M + P + ++ LC+ G + A +L + +L C
Sbjct: 102 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 161
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGR 415
P S II LCK+ + EA++LF E + +G +P +++Y +LI G C S + +A
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+++M++ G++P+V T +LI FCK G E +LE M+ +GC + ++S LI+GL
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 16/263 (6%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV---------MIEAF 300
G PD+ T+ +L++ + R+ + + M + G P+ VTY + +I+
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK K EA LL+ M+QR + +I LC E ++ +A L+ + + C PD
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF----ERGSI---PSLLTYNTLIAGMCESAELTEA 413
T++ LC+ G I A +L E R I P+L++Y+ +I G+C+ EA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ +M +G+ P+V +Y LI GFC G ++ + EMLD G P+ T+ +LI+
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244
Query: 474 LYESGNEGEVGKVVSMATASGSV 496
+ G E +++ + G +
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCI 267
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 217/460 (47%), Gaps = 53/460 (11%)
Query: 20 GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD 79
GGA CS P + ++ F++ +++ A +F ++
Sbjct: 211 GGAVCS-------------PDVVAYNTVIDGFFKEGDVNKACDLFKEM--VQRGIPPDFV 255
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++H L +ARA D E+ L ++ N + + +I Y G+ + AV+
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQM-VNKGVLPNNWTYNNLIYGYSSTGQWKEAVR---- 310
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+FK R + ++P+V T N+L+ +LCK
Sbjct: 311 -------------------------------VFKEMRRQ-SILPDVVTFNMLMGSLCKYG 338
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A V D M G P++ ++ +L GY +G + + +F +L G P T+
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFN 398
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL+ Y G L A+ + +EM D+GV+PN +TY +I A C+ K +A + M+ +
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I C G + A EL ++ D + S+II+ LCK G++ +A
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDA 518
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +FD G P+ + Y+ L+ G C ++ +A R++D MV G+EPN Y L+ G
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CKIG EG+ + EML KG P+ ++++I+GL+E+G
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 183/365 (50%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPELA+ F ++ + ++ + N LL + KR D + + + VP+VF
Sbjct: 124 AHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF 183
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ +IL+K+LC + A +L M G V P++V + T++ G+ GD+ A +F
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ RG PD TY+ ++ K + A + +M + GV PN TY +I +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + +M ++ +P ++ LC+ GK+++A +++ + K PD +
Sbjct: 304 QWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 365 TIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ +G + + LFD G P + T+N LI L +A ++++M +
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+PNV TY +I C+IG + + +M+D+G P+K ++ LI+G G+ +
Sbjct: 424 GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 484 GKVVS 488
+++S
Sbjct: 484 KELIS 488
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 191/410 (46%), Gaps = 14/410 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ Y G + A+ F + V+ +V + T++ AL + + D F N
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF-NQM 455
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V P+ + + LI+ C + A ++ E+ + GM ++V ++I+ G +
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A+ +F ++ G P A Y++LMDGY +G++ A++V D M G+EPN+V YG +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +CK + E +L +MLQ+ PS+ L +ID L E G+ A + +
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
+ S ++ L K EA LF E ++ ++T NT+IAGM ++ + EA
Sbjct: 636 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 695
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + G+ P V TY+++I K G +E + M + GC P+ + ++ L
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 755
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNF----LLTRIVSDLDSGAGALDE 521
+ G +S + D NF L T ++ DL S G E
Sbjct: 756 KKNEIVRAGAYLS--------KIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 132/265 (49%), Gaps = 11/265 (4%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P + TY +LMD + R A+ ++ G+ + + +++ FC+ K++ E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164
Query: 309 ARNLLDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAI 362
A LD +L R VP ++ LC++GK A +L + + C PD
Sbjct: 165 A---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I KEG + +A LF E +RG P +TY++++ +C++ + +A MV
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KGV PN +TYN LI G+ G KE +R+ +EM + P+ +F++L+ L + G
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK 341
Query: 482 EVGKVV-SMATASGSVESDSWNFLL 505
E V +MA + + S+N +L
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIML 366
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 14/274 (5%)
Query: 70 FHPN---FSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
HP +S D Y ++ K+ +A R FDA+ S I+ + ++ T++ Y
Sbjct: 530 LHPTAVVYSMLMDGY-CLVGKMEKALRVFDAMVS--------AGIEPNDVVYGTLVNGYC 580
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
GR + + F + + ++ S N +++ L + R + F + N
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-GIAMNK 639
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T +I+++ L K + AI + E+ +M + +++T T++ G +E AK +F
Sbjct: 640 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 699
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
I G VP TY++++ IK G + +A + M++ G EP+ ++ K +
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
A L + +R + ++DL +G
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 169/299 (56%), Gaps = 1/299 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN T NILI CK ++V GA+RV EM G+ PN+VT+ ++ G G ++ A
Sbjct: 224 ICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAV 283
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ P+ T+ VL++G+ K + +A+ + ++ME GV+PN +TY +I+A+
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + +A L + M+ R P + +I LC +G V+ A L ++ K D
Sbjct: 344 CKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I LCK+G+ +A KL DE FE+G PS +TYNTL+ G C L A +
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTR 463
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M KG + NV T+N+LI+GFC G ++ +L EML++G PN+T++ ++ E + E G
Sbjct: 464 MERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 223/443 (50%), Gaps = 23/443 (5%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
+L L+ F ++ K SH+ + I++ LA + + + S L + + + +F
Sbjct: 13 ELILRYFTWSQK-EFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAIF 71
Query: 118 ITVIR-------NYGLAGRPELAV----------KTFLRIEKFNVQRSVRSLNTLLNALV 160
+ N LA LA + F R + + S+ S N LL+ LV
Sbjct: 72 HAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLV 131
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ + +++ K K+ NV + NI++ LCK + A V+++M G+ PN+
Sbjct: 132 KESENGDMEFVYR-EMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNV 190
Query: 221 VTHTTILGGYVWRGDI---ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+T+ T++ GY G I A + +++ +G P+ TY +L+DG+ K ++ A++V
Sbjct: 191 ITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRV 250
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
EM+ G+ PN VTY ++I C K EA L D M+ P+ +I+ C+
Sbjct: 251 FGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCK 310
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
V +A L+ + ++ P+ +T+I CK+G++ +A L++ +RG P + T
Sbjct: 311 NKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVST 370
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN LIAG+C ++ A L ++MV K + +V TYN+LI CK G +++ +++L+EM
Sbjct: 371 YNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMF 430
Query: 457 DKGCFPNKTSFSLLIEGLYESGN 479
+KG P+ +++ L++G GN
Sbjct: 431 EKGLNPSHVTYNTLMDGYCREGN 453
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 186/422 (44%), Gaps = 62/422 (14%)
Query: 130 PELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
PEL ++ F +K F + S+ +LN+L K+Y + KF ++
Sbjct: 12 PELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFL----DKFVKYEKDYSV 67
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNL---------------------VTHTTIL 227
+ + A+ D +L +M + V NL ++ +L
Sbjct: 68 SAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLL 127
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G V + + + V+ +++ R + ++ ++++G K+G+L A V+++M+ GV
Sbjct: 128 SGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVS 187
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
PN +TY +I+ +CK + GK+ A +
Sbjct: 188 PNVITYNTLIDGYCK--------------------------------MGRIGKMYKADAI 215
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCE 406
K ++ K P+ + +I CK+ + A ++F E +R G P+++TYN LI G+C
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCS 275
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
++ EA L D MV +EPNV T+N+LI GFCK E I + +M +G PN +
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIV--SDLDSGAGALDELL 523
++ LI+ + G + + +M G E ++N L+ + D+ + ++E++
Sbjct: 336 YTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV 395
Query: 524 VK 525
K
Sbjct: 396 SK 397
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 1/211 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F +EK V + + TL++A ++ R + ++ N + P V T N LI
Sbjct: 317 AINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY-NMMIDRGIFPEVSTYNCLI 375
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+K DV+ A +++EM S + ++VT+ ++ +G+ A ++ ++ ++G
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TY LMDGY + G L A+ V ME G + N VT+ V+I+ FC + +A L
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGL 495
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
L++ML+R VP+ + + + E+G V D
Sbjct: 496 LNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 189/364 (51%), Gaps = 12/364 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-----LVHLM 171
+ TVI Y L G+ E A K F ++ N++ + N+ ++ L + +R + L L+
Sbjct: 255 YNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLL 314
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+ +VPN T N LI C K D++ A DEM + G+V ++ T+ ++
Sbjct: 315 ------ESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
IE A+ + ++ ++G PD TY + ++GY + G A+ + DEM + + P
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVE 428
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +I+ F K + EA ++ +P + +ID C G ++ A +L K +
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
+PD +T++ C+E K+ EAKKL DE ERG P ++YNTLI+G + ++
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A ++D+M+ G +P + TYN LIQG+ KIG A +L EM KG P+ +++ +
Sbjct: 549 KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYV 608
Query: 471 IEGL 474
IE +
Sbjct: 609 IEAM 612
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 197/363 (54%), Gaps = 2/363 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+E + V+ +V + NT++N +++ +FK + K + P+ +T N I LCK+
Sbjct: 242 HMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDK-NLKPDCYTYNSFISRLCKE 300
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E A VL ++ G+VPN VT+ ++ G +GD++ A ++++RG V TY
Sbjct: 301 RRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTY 360
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L+ R+ +A ++ EM + GVEP+ VTY + I +C+ + +A +L D+M++
Sbjct: 361 NLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE 420
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P+ +ID+ + ++ +A E +K+ +++ +PD + + +I C G I
Sbjct: 421 KNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDR 480
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +L E + + P +T+NTL+ G C ++ EA +L D+M E+G++P+ +YN LI
Sbjct: 481 AFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLIS 540
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G+ K G+ K+ + + +EML G P +++ LI+G + G +++ + G
Sbjct: 541 GYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITP 600
Query: 498 SDS 500
DS
Sbjct: 601 DDS 603
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+ + +++ A+C+ +K EA L+ M + + +P + C ++ LL + K++ A +++
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAEL 410
+++ N I S+I+ T+N +I +C +
Sbjct: 208 MVKMN------IKSSIV----------------------------TFNIMINILCREGKW 233
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A M GV+PNV TYN +I G+C G + +I + M DK P+ +++
Sbjct: 234 KKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSF 293
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIVS--DLDSGAGALDELL 523
I L + E V+ SG V + ++N L+ + DLD DE++
Sbjct: 294 ISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMM 349
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 225/411 (54%), Gaps = 13/411 (3%)
Query: 33 PPIKPWPQRLYPKRL--VSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR 90
P +P P+ + KR+ V+ + ++ + AL +FH + F H Y +Y ++++KLAR
Sbjct: 31 PHERPTPK--FRKRIPFVTEVKTVEDPEEALSLFHRYKE--QGFRHYYPSYAALLYKLAR 86
Query: 91 ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
+R FDAVE++L +K + E++C E++FI + ++YG PE AV+ F R+ +FN R+++
Sbjct: 87 SRMFDAVETILAHMK-DTEMQCRESVFIALFQHYG----PEKAVELFNRMPQFNCTRTIQ 141
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N LLN L+ N R+D + +F S ++ PN T NI++K K + A V DE
Sbjct: 142 SFNALLNVLIDNDRFDEANDIFGKS-YEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDE 200
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + P++VT+ +++G +GD++ A + D+ +G + TY +LM+G + +
Sbjct: 201 MLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEK 260
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+A K+M +M G + V +GV++ K K EA++LL +M +R+ P
Sbjct: 261 TEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNI 320
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
+I+ LC+EGK +A ++ + C+P+ A ++ LC+ G A + +
Sbjct: 321 LINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSR 380
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
P T+N ++ G+ +S + + + ++M ++ +E ++ ++ +I+ C
Sbjct: 381 HCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRKLEFDLESWETIIKSAC 431
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 145/290 (50%), Gaps = 4/290 (1%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E A +F + ++ L++ I R +A + + + G PN VT+ +M
Sbjct: 122 EKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFNIM 181
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++ + G+A + D+MLQ++ PS +I LC +G ++ A L + + +K
Sbjct: 182 VKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGK 241
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+ + ++ LC K EAKKL FD RG + + L+ + + ++ EA
Sbjct: 242 HANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKS 301
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L +M ++ ++P+V TYN+LI CK G A E ++L EM GC PN ++ ++++GL
Sbjct: 302 LLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLC 361
Query: 476 ESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVS--DLDSGAGALDEL 522
+ G+ E + + +M T+ S+++N ++ ++ ++D L+E+
Sbjct: 362 QIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEM 411
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 126/257 (49%), Gaps = 10/257 (3%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK-VMDEMEDNGVEPNEVTY 293
D E A +F ++G+ +Y L+ + R+ DAV+ ++ M+D ++ E +
Sbjct: 54 DPEEALSLFHRYKEQGFRHYYPSYAALLYKLAR-SRMFDAVETILAHMKDTEMQCRESVF 112
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+ + + K A L + M Q + ++++L + + ++A +++ +
Sbjct: 113 IALFQHYGPEK----AVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYE 168
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTE 412
P+ + ++ +G+ +A ++FDE + + PS++TYN+LI +C +L +
Sbjct: 169 MGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDK 228
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A L +DM +KG N TY +L++G C + +E +++ +M +GC +F +L+
Sbjct: 229 AMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMN 288
Query: 473 GLYESGNEGEVGKVVSM 489
L G G+V + S+
Sbjct: 289 DL---GKRGKVEEAKSL 302
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 217/440 (49%), Gaps = 13/440 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + + D A ++F + S + TY++++ L R +
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVE--CSPSMVTYNTLLDGLFRTGKLERAM 65
Query: 99 SLLTE-LKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+L E L + N+ +T GL AG+ E A++ F +++ +V + + L
Sbjct: 66 ALFQEMLDRRSHDVISFNILVT-----GLCRAGKIETALEFFRKMDD-RCSPNVITYSVL 119
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ L + R + ++ + + P+V T IL+ LCK+ V A VL EM G
Sbjct: 120 IDGLCKANRVSQAVELLESMKAR-GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
VPNLVT+ ++L G + +A + D+ RG P+ TY L+DG K+GR+ DA
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ +M D G P+ + Y ++I CK + E+ LL + P VI L
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSL 394
C ++++AC L + + C PD + ST+I LCK GK+ EA L++ G +
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+TY+TLI G+C++ + EA L MV G P+ TYN LI+G C + + E I ++EE
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418
Query: 455 MLDKGCFPNKTSFSLLIEGL 474
M C P+ ++++LI G+
Sbjct: 419 MERSNCAPSAVTYNILIHGM 438
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 230/459 (50%), Gaps = 16/459 (3%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
++ P + L+ +FR L+ A+ +F + SH+ +++ ++ L RA
Sbjct: 39 VECSPSMVTYNTLLDGLFRTGKLERAMALFQ---EMLDRRSHDVISFNILVTGLCRA--- 92
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSL 152
+E+ L E + + +C N+ + GL A R AV+ ++ V +
Sbjct: 93 GKIETAL-EFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 151
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKV--VPNVFTCNILIKALCKKDDVEGAIRVLDE 210
L++ L + + V ++ R VPN+ T N L+ LC+ V A+ ++ +
Sbjct: 152 TILVDGLCKESK---VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 208
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G PN+VT+ T++ G G +++A + D++D+G PD Y +L++G K +
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +++ ++ G++P+ VTY +I C+ + EA LL + R P L
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
+ID LC+ GKV++A +L++ + C D ST+I LCK G++ EA L R G
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE-G 448
+ PS +TYN+LI G+C+ L EA L ++M P+ TYN+LI G C++
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ +EM+D G P+ ++S+L+EGL +S + E+ +V
Sbjct: 449 LDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 487
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 228/435 (52%), Gaps = 14/435 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY+S+I L + D + L +K ++C ++ + T++ G+ E A+
Sbjct: 9 NVVTYNSLIDGLCKNNEPDRAQELFEHMKS---VECSPSMVTYNTLLDGLFRTGKLERAM 65
Query: 135 KTFLRIEKFNVQRS--VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
F ++ +RS V S N L+ L + + + F+ + + PNV T ++LI
Sbjct: 66 ALF---QEMLDRRSHDVISFNILVTGLCRAGKIETALEFFR--KMDDRCSPNVITYSVLI 120
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + V A+ +L+ M + G P+++T+T ++ G + A V ++LD G V
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L+ G + R++DA+ +M +M G PN VTYG +I+ CK + +A +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L DM+ + P + +I+ LC+ +V+++ L +R + PD S++I+ LC+
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++ EA +L + RG P ++ Y+TLI G+C++ ++ EA L++ M G + +V T
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMA 490
Y+ LI G CK G E +L M+ G P+ +++ LI+GL + + E ++V M
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 420
Query: 491 TASGSVESDSWNFLL 505
++ + + ++N L+
Sbjct: 421 RSNCAPSAVTYNILI 435
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 205/405 (50%), Gaps = 13/405 (3%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
P+ A + F ++ S+ + NTLL+ L + + + +F+ + +V + N
Sbjct: 26 PDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS--HDVISFN 83
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
IL+ LC+ +E A+ +M PN++T++ ++ G + A + + R
Sbjct: 84 ILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 142
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD TYT+L+DG K ++ A +V+ EM D G PN VTY ++ C+ ++ +A
Sbjct: 143 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L+ DM R P+ +ID LC+ G+V+DAC + ++ K PD I + +I+
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK ++ E+ L G I P ++TY+++I G+C S L EA RL + +G P+
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE----VG 484
V Y+ LI G CK G E + E M GC + ++S LI+GL ++G E +
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382
Query: 485 KVVSMATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
++V M T ++ ++N L+ + ++ LD ++E+ NC
Sbjct: 383 RMVRMGTPPSTM---TYNSLIKGLCDLNHLDEAIELVEEMERSNC 424
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 169/313 (53%), Gaps = 3/313 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T N LI LCK ++ + A + + M S+ P++VT+ T+L G G +E A +
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++LDR D ++ +L+ G + G++ A++ +M+D PN +TY V+I+ CK
Sbjct: 68 FQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCK 125
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A LL+ M R P ++D LC+E KV A E+ + +L C+P+
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++H LC+ ++ +A L + RG P+++TY TLI G+C+ + +A + DM+
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+KG P++ YNMLI G CK E I +L + G P+ ++S +I GL S
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305
Query: 482 EVGKVVSMATASG 494
E +++ + G
Sbjct: 306 EACRLLLYVKSRG 318
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 186/417 (44%), Gaps = 45/417 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
LV+ + R ++ AL+ F K S N TY +I L +A LL +K
Sbjct: 85 LVTGLCRAGKIETALEFFR---KMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKA 141
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQ--RSVRSLNTLLNALVQNKR 164
C ++ I GL ++A + E + ++ + N+LL+ L + +R
Sbjct: 142 R---GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 198
Query: 165 YD-----------------------LVHLMFKNSRHKFKV-----------VPNVFTCNI 190
L+ + K R K P++ N+
Sbjct: 199 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 258
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK D V+ +I +L S G+ P++VT+++++ G ++ A R+ + RG
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD Y+ L+DG K G++ +A + + M +G + + VTY +I+ CK + EA
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAH 378
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL M++ PS+ +I LC+ +++A EL + + R NC P + +IH +
Sbjct: 379 LLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 438
Query: 371 CKEGKIWEAK-KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL-WDDMVEKG 424
C+ ++ A F E + G IP +TY+ L+ G+ +S +L E L D MV+ G
Sbjct: 439 CRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 205/369 (55%), Gaps = 4/369 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F H+Y +Y S+I+KLAR+R F+AVE++L L+ N I+C E LF+ +I++YG A E
Sbjct: 77 FKHHYPSYSSLIYKLARSRRFEAVETILGHLR-NRNIRCNETLFVALIQHYGKAHLVEKG 135
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ F ++ FN R+++S N LLN LV ++ +F+ + ++ PN + NI+IK
Sbjct: 136 IELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQA-YEMGFRPNSVSYNIMIK 194
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
KK E A + DEM G+ P++VT+ + LG +G+++ A +F ++ ++G P
Sbjct: 195 GWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHP 254
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+A TY +LM+G+ +G+ +A K+M +ME +G + V YGV++ K E +LL
Sbjct: 255 NAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLL 314
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++M +R+ P +++ LC+EGKV DA ++ ++ C P+ A +I C
Sbjct: 315 NEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNA 374
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTE-AGRLWDDMVEKGVEPNVFT 431
G A K+ + G P L T+ +L+ G+ + + + ++M ++ + + T
Sbjct: 375 GDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAET 434
Query: 432 YNMLIQGFC 440
+ +LI C
Sbjct: 435 WRILIMDVC 443
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 180/383 (46%), Gaps = 6/383 (1%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTC 188
P A+ F + + S ++L+ L +++R++ V + + R++ + +F
Sbjct: 62 PCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVA 121
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K VE I + +MPS L + +L V A +F +
Sbjct: 122 --LIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYE 179
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G+ P++ +Y +++ G+IK G A + DEM + GV+P+ VTY + C+ +
Sbjct: 180 MGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDT 239
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L +M ++ + P++ +++ C GK ++A +L + C ++
Sbjct: 240 ALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMT 299
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G I E + L +E ++ + P ++TYN L+ +C+ ++ +A ++ M G +P
Sbjct: 300 HLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDP 359
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TY M+I G+C G+ ++IL ML G +P+ +F+ L+ GL + N + V
Sbjct: 360 NAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFV 419
Query: 488 --SMATASGSVESDSWNFLLTRI 508
M ++++W L+ +
Sbjct: 420 LEEMEKRQLRFDAETWRILIMDV 442
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA LF+ + E+G +Y++LI + S + + + + N + LI
Sbjct: 64 EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-S 495
Q + K ++GI + +M CF SF++L+ L + + ++ A G
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183
Query: 496 VESDSWNFLLTRIVSD--LDSGAGALDELLVK 525
S S+N ++ + + DE+L K
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEK 215
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 200/397 (50%), Gaps = 19/397 (4%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ + LL+A+ + ++DLV + + N++T +ILI
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLV-ISLGEQMQNLGISHNLYTYSILI 123
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G P++VT ++L G+ I +A + G +++ G+
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD+ T+ L+ G + R ++AV ++D M G +P+ VTYG+++ CK A +L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M Q K P + +ID LC V DA L+ + K P+ +++I LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G+ +A +L D ER P+++T++ LI + +L EA +L+D+M+++ ++P++FT
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG-------------LYESG 478
Y+ LI GFC E + E M+ K CFPN +++ LI+G E
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 479 NEGEVGKVVSMATASGSV----ESDSWNFLLTRIVSD 511
G VG V+ T E D+ + ++VSD
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 209/425 (49%), Gaps = 6/425 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ ++ +A+ FD V SL E QN I + +I + + LA+ ++
Sbjct: 84 FSKLLSAIAKMNKFDLVISL-GEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
K + + +LN+LLN R D V L+ + ++ P+ FT N LI L + +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ--PDSFTFNTLIHGLFRHN 200
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+ ++D M G P+LVT+ ++ G RGDI+ A + + P Y
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++D + DA+ + EM++ G+ PN VTY +I C + +A LL DM++R
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
K P+ +ID +EGK+ +A +L+ +++++ PD S++I+ C ++ EA
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K +F+ + P+++TYNTLI G C++ + E L+ +M ++G+ N TY LI G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
F + + ++M+ G P+ ++S+L++GL +G + E VV +E
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG-KVETALVVFEYLQRSKMEP 499
Query: 499 DSWNF 503
D + +
Sbjct: 500 DIYTY 504
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 227/451 (50%), Gaps = 16/451 (3%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIK-CGENLFITVIRNYGLAGRPE--LAVK 135
T++++IH L R RA +AV L +K C +L I GL R + LA+
Sbjct: 188 TFNTLIHGLFRHNRASEAVA-----LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++E+ ++ V NT+++AL K + +F +K + PNV T N LI+ L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCL 301
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C A R+L +M + PN+VT + ++ +V G + A++++ +++ R PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY+ L++G+ RL +A + + M PN VTY +I+ FCK K+ E L +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M QR V ++ +I + + ++A ++K+++ +PD S ++ LC GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A +F+ +R + P + TYN +I GMC++ ++ + L+ + KGV+PNV TY
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ GFC+ G +E + EM ++G P+ +++ LI G++ +++ +
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Query: 495 SVESDSWNFLLTRIVSDLDSGAGALDELLVK 525
V S L+T ++ D G LD+ +K
Sbjct: 602 FVGDASTIGLVTNMLHD-----GRLDKSFLK 627
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 177/405 (43%), Gaps = 46/405 (11%)
Query: 20 GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD 79
G +LS + K P + ++ + +N++ AL +F + N
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD--NKGIRPNVV 292
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I L + LL+++ K NP + F +I + G+ A K
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT----FSALIDAFVKEGKLVEAEKL 348
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + K ++ + + ++L+N + R D MF+ K PNV T N LIK C
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFC 407
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V+ + + EM G+V N VT+TT++ G+ + +NA+ VF ++ G +PD
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY++L+DG G++ A+ V + ++ + +EP+ TY +MIE CK
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA------------- 514
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
GKVED +L+ L K P+ +T++ C++G
Sbjct: 515 ----------------------GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
EA LF E E G +P TYNTLI + + L +M
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FGD++ P ++ L+ K+ + + + ++M++ G+ N TY +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
+I FC+ G + +A +L+ M++
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P S +I L + +A L R++ K C PD +++ LCK G I A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + E+G I P ++ YNT+I +C + +A L+ +M KG+ PNV TYN LI+
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ PN +FS LI+ + G E K+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 218/442 (49%), Gaps = 42/442 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ F++ +++ A +F+ S + TY+ +++ L +ARA D E
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEM--VQRGISPDLSTYNCVVNALCKARAMDKAE 271
Query: 99 SLLTELKQNPEIKCGEN-LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
++L ++ + +N + ++I Y G+ + AV+ V + + S
Sbjct: 272 AILRQMVDKGVLP--DNWTYNSLIYGYSSTGQWKEAVR---------VSKKMTSQG---- 316
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
++P+V T N L+ +LCK ++ A V D M G
Sbjct: 317 -----------------------ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQK 353
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
++ ++ +L GY +G + + +F +L G PD+ + VL+ Y K G L A +
Sbjct: 354 TDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATII 413
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+EM + GVEP+ VTY +I A C+ K +A + M+ + PS + +I C
Sbjct: 414 FNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCT 473
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLT 396
G + A +L +++ K PD + II+ LCK G++ +A+ +FD G P+++
Sbjct: 474 HGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMV 533
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNTL+ G C ++ A R++D MV G++PNV Y L+ G+CK+G EG+ + E+L
Sbjct: 534 YNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL 593
Query: 457 DKGCFPNKTSFSLLIEGLYESG 478
KG P+ T +++++ GL+++G
Sbjct: 594 HKGIKPSTTLYNIILHGLFQAG 615
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 192/412 (46%), Gaps = 47/412 (11%)
Query: 113 GENLFITVIRNYGL-------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
G + + YG+ A RP+L + F ++ K + ++ LL L + KR
Sbjct: 100 GPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRT 159
Query: 166 -DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVT 222
+ + ++ H VP+VF+ I++K+LC A +L M G V PN V
Sbjct: 160 AEALDILLHRMPH-LGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVA 218
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ T++ G+ GD+ A +F +++ RG PD +TY +++ K + A ++ +M
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
D GV P+ TY +I + + EA + M + +P ++ LC+ GK++
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338
Query: 343 DA-----------------------------------CELWKRLLRKNCMPDNAISSTII 367
DA EL+ +L PD+ I + +I
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
K G + A +F+E E+G P ++TY+T+IA +C ++ +A ++ M+++GV
Sbjct: 399 KAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVA 458
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
P++ TY+ LIQGFC G+ + ++ +M++KG P+ F+ +I L + G
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG 510
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 177/362 (48%), Gaps = 4/362 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L+ A + D ++F R + V P+V T + +I ALC+ ++ A+ ++M
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQ-GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ P++ T+ ++ G+ GD+ AK + ++++G PD + +++ KLGR+
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRV 512
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
DA + D G+ PN + Y +++ +C K A + D M+ P+ + +
Sbjct: 513 MDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTL 572
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
++ C+ G++++ L++ +L K P + + I+H L + G+ AK F E E G
Sbjct: 573 VNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGI 632
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
TY+ ++ G+ +++ EA L+ ++ V+ ++ T N++I G +I +E
Sbjct: 633 AMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKD 692
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS 510
+ + G P+ ++S+++ L + G E + S +G + +S LL +V
Sbjct: 693 LFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQ--LLNHVVR 750
Query: 511 DL 512
+L
Sbjct: 751 EL 752
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 137/268 (51%), Gaps = 5/268 (1%)
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM-DEMEDNGVEPNEVTYGVMIEAFC 301
FG +L G D + L+ G + R +A+ ++ M G P+ +Y +++++ C
Sbjct: 131 FGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLC 190
Query: 302 KGKKSGEARNLLDDMLQRKYV--PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+KSG+A LL M + V P++ VID +EG V AC+L+ ++++ PD
Sbjct: 191 SDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPD 250
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ + +++ LCK + +A+ + + ++G +P TYN+LI G + + EA R+
Sbjct: 251 LSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSK 310
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M +G+ P+V T N L+ CK G K+ + + M KG + S+ +++ G G
Sbjct: 311 KMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKG 370
Query: 479 NEGEVGKVVSMATASG-SVESDSWNFLL 505
++ ++ ++ + G + +S +N L+
Sbjct: 371 CLVDLTELFNLMLSDGIAPDSHIFNVLI 398
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P TYG++++ + + +L+ + + ++ LCE + +A
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 346 E-LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS---IPSLLTYNTLI 401
+ L R+ C+PD ++ LC + K +A +L G +P+ + YNT+I
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + ++ +A L+++MV++G+ P++ TYN ++ CK + IL +M+DKG
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
P+ +++ LI G +G E +V T+ G
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F + NV+ + +LN ++ + Q +R + +F S + +VP+V T +I++
Sbjct: 655 AILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFA-SISRSGLVPSVVTYSIMM 713
Query: 193 KALCKKDDVEGAIRVLDEMPSMGM-VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
L K+ VE A + M + G PN ++ + + +I A I +R +
Sbjct: 714 TNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSF 773
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVM 278
D +T T+L+D + G + ++ +
Sbjct: 774 SLDHSTTTLLIDLFSSKGTCREHIRFL 800
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 207/429 (48%), Gaps = 40/429 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+SI+ L +ARA D E +L ++ + ++ + +I Y +G + + K F +
Sbjct: 301 TYNSIVDALCKARAMDKAELVLRQM-VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRK 359
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + +P + T N + +LCK
Sbjct: 360 MTSKGL------------------------------------IPGIVTFNSFMSSLCKHG 383
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A + M + G +P+LV+++ +L GY G + +F + D+G V + +
Sbjct: 384 RSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFN 443
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ + K G + +A+ V EM+ GV P+ VTY +I AFC+ + +A M+
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC-MPDNAISSTIIHWLCKEGKIWE 378
P++ + +I C G + A EL ++ K P+ S+IIH LC EG++ +
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563
Query: 379 AKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +F+ G P+++T+N+LI G C ++ +A + D MV G+EP+V TYN L+
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVS 623
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-V 496
G+CK G +G+ + EML K P ++S++++GL+ +G K+ SG+ V
Sbjct: 624 GYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV 683
Query: 497 ESDSWNFLL 505
+ D++ LL
Sbjct: 684 DIDTYKILL 692
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 179/384 (46%), Gaps = 10/384 (2%)
Query: 121 IRNYGL-------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ YG+ A RP+L F R+ + ++ NT L L KR D +
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG--MVPNLVTHTTILGGYV 231
+ VPN + N +IK+LC + A+ ++ M G P++V+ T++ G+
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G++ A + +++ +G PD TY ++D K + A V+ +M D GVEP+ +
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +I + E+ + M + +P + LC+ G+ +DA E+++ +
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
K MPD S ++H EG+ + LF ++G + + +N LI+ + +
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM 455
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA ++ +M +GV P+V TY+ LI FC++G + + +M+ G PN + L
Sbjct: 456 DEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSL 515
Query: 471 IEGLYESGNEGEVGKVVSMATASG 494
I G G+ + ++VS + G
Sbjct: 516 IHGFCMHGDLVKAKELVSEMMSKG 539
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 197/433 (45%), Gaps = 11/433 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y ++H A F + +L + + I + F +I + G + A+ F
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSM-ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTE 464
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKALCKK 198
++ V+ V + +TL++A + R L M K S+ + PN + LI C
Sbjct: 465 MQGQGVRPDVVTYSTLISAFCRMGR--LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522
Query: 199 DDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D+ A ++ EM S G+ PN+V ++I+ G + +A VF ++ G P T
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+DGY +G++ A V+D M G+EP+ VTY ++ +CK K + L +ML
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+K P++ V+D L G+ A +++ ++ D ++ LC+
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 702
Query: 378 EAKKLFDEFERGSIP---SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EA LF + G++ + NT+I + + EA L+ + G+ PNV TY +
Sbjct: 703 EAITLFHKL--GAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGV 760
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS- 493
+I K G+ +E + M GC P+ + +I L + G+ + G +S +
Sbjct: 761 MIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTI 820
Query: 494 GSVESDSWNFLLT 506
S+E+ + + L++
Sbjct: 821 ISLEASTTSLLMS 833
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + T N LI C +E A VLD M S+G+ P++VT+ T++ GY G I++ +
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L + P TY++++DG GR + A K+ EM D+G + TY ++++ C+
Sbjct: 638 FREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 697
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA L + + VI+ L + + E+A +L+ + +P+ +
Sbjct: 698 NDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVST 757
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+IH L KEG + EA +F E+ G PS N +I + + ++ +AG +
Sbjct: 758 YGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 817
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ T ++L+ F G +E I+ L
Sbjct: 818 GTIISLEASTTSLLMSLFSSKGKHREQIKFL 848
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 270 RLTDAVKVM-DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR--KYVPSSA 326
R +AV V+ M D G PN ++Y +I++ C +S EA +++ M + + P
Sbjct: 206 RTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 265
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
VI ++G+V AC L +++K PD ++I+ LCK + +A+ + +
Sbjct: 266 SFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQM 325
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
++G P LTY +I G S E+ +++ M KG+ P + T+N + CK G +
Sbjct: 326 VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS 385
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFL 504
K+ I + M KG P+ S+S+L+ G G ++ + SMA +N L
Sbjct: 386 KDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNIL 445
Query: 505 LT 506
++
Sbjct: 446 IS 447
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 28/280 (10%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIK-LGRLTDAV--------------KVMDEM 281
++A +F ++L +G + ++G++ L R D+V ++ E
Sbjct: 91 DDAHHLFDELLRQG----TPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREE 146
Query: 282 EDNGVEPNEV-TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
V P V TYG++++ C+ ++ +L+ + + LC +
Sbjct: 147 AGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKR 206
Query: 341 VEDACE-LWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEA----KKLFDEFERGSIPSL 394
++A + L R+ C+P NAIS +T+I LC + + EA +++ E R S P +
Sbjct: 207 TDEAVDVLLHRMSDLGCVP-NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCS-PDV 264
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+++NT+I G + E+++A L ++MV+KGVEP+V TYN ++ CK + +L +
Sbjct: 265 VSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQ 324
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
M+DKG P+ +++ +I G SG+ E K+ T+ G
Sbjct: 325 MVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 143/328 (43%), Gaps = 12/328 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N YHS+IH + L++E+ + F ++I + GR A
Sbjct: 508 NTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDV 567
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK-----NSRHKFKVVPNVFTCNIL 191
F + + ++ + N+L++ Y LV M K ++ + P+V T N L
Sbjct: 568 FNLVIHIGDRPTIVTFNSLIDG------YCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ CK ++ + + EM + P VT++ +L G G AK++F +++D G
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
D TY +L+ G + +A+ + ++ + + +I A K ++ EA +
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L + VP+ + +I L +EG VE+A ++ + + C P + + + II L
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNT 399
++G I +A + + G+I SL T
Sbjct: 802 QKGDIVKAGYYMSKVD-GTIISLEASTT 828
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 94/248 (37%), Gaps = 8/248 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++ ++ D L E+ ++K + V+ AGR A K F
Sbjct: 617 TYNTLVSGYCKSGKIDDGLILFREMLHK-KVKPTTVTYSIVLDGLFHAGRTSAAKKMFHE 675
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL---IKALC 196
+ + + LL L +N D +F HK + F IL I AL
Sbjct: 676 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF----HKLGAMDCKFDITILNTVINALY 731
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K E A + + + G+VPN+ T+ ++ + G +E A +F + G P +
Sbjct: 732 KVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSR 791
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
++ ++ G + A M +++ + T +++ F K E L
Sbjct: 792 LLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFLPAK 851
Query: 317 LQRKYVPS 324
Q Y S
Sbjct: 852 YQFFYGAS 859
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 199/375 (53%), Gaps = 9/375 (2%)
Query: 112 CGENLFITVIRNYGLAGRPEL-------AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
CG +I NY R L A+ F R+ S+ LL+ + + KR
Sbjct: 38 CGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKR 97
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+D+V +F+ + + P ++TCNI++ +C+ A L +M +G P+LVT T
Sbjct: 98 FDVVISLFEQMQ-ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFT 156
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++L G+ IE+A +F I+ G+ P+ TYT L+ K L AV++ ++M DN
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN 216
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ PN VTY ++ C+ + +A LL DM++R P+ +ID + GK+ +A
Sbjct: 217 GIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEA 276
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAG 403
EL+K +++ + PD + +I+ LC G++ EA+++F E G P+ +TY TLI G
Sbjct: 277 KELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHG 336
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C+S + + +++ +M +KG+ N TY +LIQG+C +G + +M + P+
Sbjct: 337 FCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPD 396
Query: 464 KTSFSLLIEGLYESG 478
++++L++GL +G
Sbjct: 397 IRTYNVLLDGLCYNG 411
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 179/350 (51%), Gaps = 2/350 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +++ + R E A+ F +I + +V + TL++ L +N+ + +F N
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIF-NQM 213
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ PNV T N L+ LC+ A +L +M G+ PN++T T ++ +V G I
Sbjct: 214 GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKI 273
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
AK ++ ++ PD TYT L++G GRL +A ++ ME NG PNEVTY +
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL 333
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK K+ + + +M Q+ V ++ +I C G+ + A E++ ++ +
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRA 393
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
PD + ++ LC G + +A +F + + +++TY +I GMC+ ++ +A
Sbjct: 394 PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFD 453
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
L+ + KG++PNV TY +I GFC+ G E + ++M + G PN++
Sbjct: 454 LFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNES 503
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+P +T L+ K+ R + + ++M+ G+ P T +++ C+ + A
Sbjct: 79 LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASC 138
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L M++ + P ++ C ++EDA L+ +++ P+ +T+IH LC
Sbjct: 139 FLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC 198
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K + A ++F++ + G P+++TYN+L++G+CE ++A L DM+++G++PNV
Sbjct: 199 KNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI 258
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
T+ LI F K+G E + + M+ +P+ +++ LI GL G E ++ +
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318
Query: 491 TASG 494
++G
Sbjct: 319 ESNG 322
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 14/329 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR-ARAFDAV 97
P + L+ + + ++L+ A++IF+ G N TY+S++ L R DA
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMGD--NGIRPNVVTYNSLVSGLCEIGRWSDAA 242
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
L +K+ I+ F +I + G+ A + + + + +V V + L+N
Sbjct: 243 WLLRDMMKRG--IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALIN 300
Query: 158 ALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L R D + +LM N + PN T LI CK VE ++ EM
Sbjct: 301 GLCTYGRLDEARQMFYLMESNGYY-----PNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQ 355
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G+V N +T+T ++ GY G + A+ VF + R PD TY VL+DG G +
Sbjct: 356 KGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEK 415
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ + M ++ N VTY ++I+ CK K +A +L + + P+ +I
Sbjct: 416 ALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 475
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAI 362
C G + +A L+K++ +P+ ++
Sbjct: 476 GFCRRGFIHEADALFKKMKEDGFLPNESV 504
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 217/416 (52%), Gaps = 5/416 (1%)
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRS 151
D ++ L + PE+ N I + L GR A + L++E V S
Sbjct: 231 LDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVIS 290
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+T++N Q V + + + K + PN +T N +I LCK V A RVL EM
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIK-GLKPNPYTYNGVILLLCKTGKVAEAERVLREM 349
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
S G+ P+ V +TT++ G+ G++ +A R+F ++ R PD TYT ++ G + GR+
Sbjct: 350 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRV 409
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A K+ EM +EP+EVTY +I+ +CK K EA +L + MLQ P+ +
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 469
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGS 390
D LC+ G+V+ A EL + RK + +++++ LCK G I +A KL + E G
Sbjct: 470 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P +TY TL+ C+S E+ A L M+++ ++P V T+N+L+ GFC G ++G +
Sbjct: 530 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 589
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+L+ ML+KG PN T+++ LI+ N ++ A G V + +++N L+
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 36/306 (11%)
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
N + + PN+ T L LCK +V+ A +L EM G+ N+ T+ +++ G
Sbjct: 452 NQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKA 511
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G+I+ A ++ D+ G+ PDA TYT LMD Y K + A +++ +M D ++P VT+
Sbjct: 512 GNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTF 571
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
V++ FC + LL ML++ +P++ + L++
Sbjct: 572 NVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT--------------------TYNSLIK 611
Query: 354 KNCMPDNAISST-IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTE 412
+ C+ +N ++T I +C +G +P TYN LI G C++ + E
Sbjct: 612 QYCIRNNMRATTEIYRGMCAKG---------------VVPDGNTYNILIKGHCKARNMKE 656
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A L DMV KG V +YN LI+GF K E + E+M +G ++ +++ +
Sbjct: 657 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716
Query: 473 GLYESG 478
Y+ G
Sbjct: 717 INYDEG 722
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 72/302 (23%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM--------------------------- 281
+ W D + + ++ G L +A K+ D+M
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK 235
Query: 282 ---------EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+ GV N +Y ++ + C+ + EA LL M R +P VI
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295
Query: 333 D-----------------------------------LLCEEGKVEDACELWKRLLRKNCM 357
+ LLC+ GKV +A + + ++ +
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRL 416
PD I +T+I CK G + A +LFDE ++ I P +TY +I G+C++ + EA +L
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ +MV K +EP+ TY LI G+CK G KE + +ML G PN +++ L +GL +
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 477 SG 478
G
Sbjct: 476 CG 477
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 2/289 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++ L + D LL E+ + ++ + +++ AG + AVK
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKG-LELNIYTYNSLVNGLCKAGNIDQAVKL 520
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+E + TL++A +++ H + + + ++ P V T N+L+ C
Sbjct: 521 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTVVTFNVLMNGFC 579
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+E ++L M G++PN T+ +++ Y R ++ ++ + +G VPD
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 639
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+ G+ K + +A + +M G +Y +I+ F K KK EAR L + M
Sbjct: 640 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 699
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ V + D+ +EGK+E EL + K + D +T
Sbjct: 700 RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 220/443 (49%), Gaps = 11/443 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L ++ + R L AL ++ HP ++ TY ++H L++AR
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP---DFLTYTKLVHGLSKARRLRDAV 59
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+L E+ + L + V+++ L R + A + + + + + + L++
Sbjct: 60 QVLQEMVSARHVPDNTTLTV-VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L + +R D + + + P V T N +I C+ V+ A +++M + G P
Sbjct: 119 LCKCERLDEAVALVETMAER-GCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHP 177
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+++T+T ++GG+ D+ + G++ RG+ PD TY+ ++DG K GRL DAV +
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 237
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+EM P +TY +I +C+ EA LL M+ K P ++ C+
Sbjct: 238 EEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKM 294
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
G+++DA EL+++++ PD ++++ LC EG++ +A +L +E RG P++ TY
Sbjct: 295 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 354
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N ++ G C++ ++ +A L D +G PN TYN+L+ G C+ G + ++ L+++
Sbjct: 355 NCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 414
Query: 458 KG--CFPNKTSFSLLIEGLYESG 478
+G C + ++++++ L G
Sbjct: 415 EGGPCPTSVAMYAIILDALCRDG 437
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 187/356 (52%), Gaps = 12/356 (3%)
Query: 155 LLNALVQNKRY-DLVHLM--FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
L++ L + +R D V ++ ++RH VP+ T +++++LC D V+ A +++EM
Sbjct: 45 LVHGLSKARRLRDAVQVLQEMVSARH----VPDNTTLTVVVQSLCLGDRVDDARELVEEM 100
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
GM N +T++ ++ G ++ A + + +RG P TY ++ G+ + R+
Sbjct: 101 LHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRV 160
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A M++M G P+ +TY +I FCK + G LL ++ +R + P V
Sbjct: 161 DEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTV 220
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
ID LC+ G++ DA ++++ + +C P +++I C+ G + EA +L + +
Sbjct: 221 IDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKC 277
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P ++TY TL++ C+ L +A L+ MV + P+V T+ L+ G C G ++ +
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
+LEE+ +GC P +++ +++G ++ + ++V+ + G V + ++N L+
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILV 393
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 188/382 (49%), Gaps = 14/382 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+SII RAR D + ++ +P+I + +I + + ++
Sbjct: 146 TYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII----TYTALIGGFCKSRDVGRGLEL 201
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + + +T+++ L + R +F+ + P T N LI C
Sbjct: 202 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE----EMSCAPTAITYNSLIGGYC 257
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ D++ AIR+L +M P++VT+TT++ + G +++A +F ++ PD
Sbjct: 258 RAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 317
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+DG GR+ DA+++++E+ G P TY +++ +CK + +A L+ D
Sbjct: 318 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAISSTIIHWLCKEG 374
R +VP++ ++ C G+ + A + +L + C A+ + I+ LC++G
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 437
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ +A + ++E +RG +P+ T+ T++ +C++ + +A L ++M++ G P T +
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 497
Query: 434 MLIQGFCKIGNAKEGIRILEEM 455
++ +C+ G ++ + E+
Sbjct: 498 AVVSAYCRAGMIQKADELASEL 519
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
P + + +I LC+ G++ A ++ + P LTY L+ G+ ++ L +A ++
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVL 62
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+MV P+ T +++Q C + ++EEML +G N ++S L++GL +
Sbjct: 63 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 122
Query: 478 GNEGE-VGKVVSMATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
E V V +MA + ++N ++T +D G +++++ + C
Sbjct: 123 ERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 205/414 (49%), Gaps = 21/414 (5%)
Query: 108 PEIKCGENLFITVIRNYGLAGRP-ELAVKTFLRIEKFNVQRSVRSL--------NTLLNA 158
P+ KC +N T I +YGL+ P L KT L I F + + S+ TL
Sbjct: 20 PDPKCNKNKSKTKIVHYGLSIPPFHLQQKTPLPIPIFIIFALIISVVSICCINQQTLFPC 79
Query: 159 LVQNKRYDLVHLMFKNSR--HKFKVV---------PNVFTCNILIKALCKKDDVEGAIRV 207
+ V K S K++ P+V T N+LI +CK+ ++ AI+
Sbjct: 80 FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L+ MPS G PN++TH IL G +A+++ D+L +G P T+ +L++ +
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G L A+ ++++M +G PN ++Y ++ FCK KK A LD M+ R P
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++ LC++GKV+ A E+ +L K C P +T+I L K GK A KL DE
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 388 R-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
R G P ++TY++L++G+ ++ EA + + D+ G+ PN TYN ++ G CK
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 379
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
I L M+ K C P + ++++LIEG+ G E +++ + G V+ S
Sbjct: 380 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSS 433
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S + CKE + +A KL DE +GS P ++TYN LI G+C+ L EA + ++M
Sbjct: 86 SFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 145
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G +PNV T+N++++ C G + ++L +ML KGC P+ +F++LI L G G
Sbjct: 146 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 205
Query: 483 VGKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
++ G + S S+N LL + +D LD ++ + C
Sbjct: 206 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 253
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY++++ L + D +L +L C L + TVI G+ E A+K
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSK---GCSPVLITYNTVIDGLSKVGKTERAIKLL 315
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + ++ + + ++L++ L + + D + F + + PN T N ++ LCK
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEA-IKFFHDLEGLGIRPNAITYNSIMLGLCK 374
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ AI L M S P T+T ++ G + G + A + ++ RG V ++
Sbjct: 375 SRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434
Query: 258 YTV 260
V
Sbjct: 435 EQV 437
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 195/371 (52%), Gaps = 3/371 (0%)
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
F +Q N LLN LV+ + L+ ++ + + P+V T N L+KALC+ V
Sbjct: 48 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVR 106
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+ +L+EM S G+ P+ T TT++ G+V G IE A RV +L+ G T VL+
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+GY KLGR+ DA+ + + +G EP+++TY + C+ G A ++D M+Q +
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P V++ LC+ G++E+A + +++ + C+PD +T+I LC ++ EA L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ +G P + T+N LI +C+ + A RL+++M G P+ TYN LI C
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDS 500
+G + + +L++M GC + +++ +I+GL + E +V G S + +
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 406
Query: 501 WNFLLTRIVSD 511
+N L+ + D
Sbjct: 407 FNTLIDGLCKD 417
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 202/401 (50%), Gaps = 5/401 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+++++ L RA +L E+ + E F T+++ + G E A++ R
Sbjct: 91 TFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAALRVKAR 149
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + ++N L+N + R D + + + F+ P+ T N + LC+
Sbjct: 150 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE--PDQITYNTFVNGLCQN 207
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D V A++V+D M G P++ T+ ++ G +E AK + ++DRG +PD TT+
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ RL +A+ + ++ GV P+ T+ ++I A CK A L ++M
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC GK+ A +L K + C +TII LCK+ +I E
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 387
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++FD+ + +G + +T+NTLI G+C+ ++ +A L + M+ +G++PN TYN ++
Sbjct: 388 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 447
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+CK G+ K+ ILE M G + ++ LI GL ++G
Sbjct: 448 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 170/334 (50%), Gaps = 1/334 (0%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
D V L+ + F + + N L+ L + ++ V EM + G+ P++VT T
Sbjct: 35 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ + A + ++ RG PD TT+T LM G+++ G + A++V M + G
Sbjct: 95 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+VT V+I +CK + +A + + + P ++ LC+ V A
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
++ ++++ PD + +++ LCK G++ EAK + ++ +RG +P + T+NTLIA +
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C L EA L + KGV P+V+T+N+LI CK+G+ +R+ EEM + GC P++
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+++ LI+ L G G+ ++ ++G S
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + NTL+ AL R + + + K V P+V+T NILI ALCK D A+R+
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLALRLF 322
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EM + G P+ VT+ T++ G + A + D+ G TY ++DG K
Sbjct: 323 EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 382
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
R+ +A +V D+M+ G+ N +T+ +I+ CK KK +A L++ M+ P++
Sbjct: 383 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 442
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
++ C++G ++ A ++ + + D T+I+ LCK G+ A K+
Sbjct: 443 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 502
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA-K 446
+G P+ YN ++ + + +A L+ +M E G P+ TY ++ +G C+ G K
Sbjct: 503 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIK 562
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + EM+DKG P +SF +L EGL G
Sbjct: 563 EAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 227/480 (47%), Gaps = 44/480 (9%)
Query: 66 YAGK-FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIR 122
Y K F S + TY S+I L R D V S P C N + T+I
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLI--LGYCRNND-VNSAYKVFNMMPNKGCRRNEVSYTTIIH 292
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
AGR + + F ++ + + +VR+ +++AL N R +L + N +
Sbjct: 293 GLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDR-NLEGMDLFNEMRERSCE 351
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T +++ A+CK+ ++ + R+L+EM G+VP++VT+ ++ GY G IE A +
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411
Query: 243 FG-----------------------------------DILDRGWVPDATTYTVLMDGYIK 267
G +L+ P TY L+ K
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G A K++D +++NG+ P++ TY V I+ CK K+ EA +L + + ++ + +
Sbjct: 472 AGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVM 531
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ID C+ GK+++A L +R+ ++C+P+++ +++I+ +CKEGK+ E + +
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591
Query: 388 R-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ G P++ TY LI M + A R+++ MV G +P+V+TY I +C GN K
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS-WNFLL 505
E ++ M++ G P+ +++LLI G + V+ +G S WN L+
Sbjct: 652 EAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 236/528 (44%), Gaps = 87/528 (16%)
Query: 37 PWPQRLYPK---RLVSMIFRQQ---NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR 90
P Q+L P VS +F N ++ALQ F+ P F H ++ ++ L
Sbjct: 73 PSFQKLIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIP 132
Query: 91 ARAF-----------------DAVESLLTELKQ----NPEIKCGENLFITVIRNYGLAGR 129
F D + LL L+Q + +IK F +R+Y
Sbjct: 133 NNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIK-----FKLSVRSYN---E 184
Query: 130 PELAVKTFLRIEKFN----------VQRSVRSLNTLLNALVQNKRYDLVHL-MFKNSRHK 178
+ + FL I++ + ++ +LNT++NA +K ++V ++ + +
Sbjct: 185 LLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAY--SKMGNIVEANLYVSKIFQ 242
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P+ FT LI C+ +DV A +V + MP+ G N V++TTI+ G G I+
Sbjct: 243 AGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDE 302
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+F + + P TYTV++ R + + + +EM + EPN TY VM++
Sbjct: 303 GISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVD 362
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A CK +K E+R +L++M+++ VPS +I CEEG++E A E+ + NC P
Sbjct: 363 AMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRP 422
Query: 359 DN-----------------------------------AISSTIIHWLCKEGKIWEAKKLF 383
+ +++IH CK G A KL
Sbjct: 423 NERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLL 482
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
D E G +P TY+ I +C+S + EA L++ + EKG++ N Y LI G CK
Sbjct: 483 DLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKA 542
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
G E I +LE M + C PN ++++ LI G+ + EG+V + +SM
Sbjct: 543 GKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCK---EGKVQEGLSMV 587
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
S+ +YN L+ + + E R++ +M+ + PN++T N ++ + K+GN E +
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ G P+ +++ LI G + + KV +M G
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 219/432 (50%), Gaps = 16/432 (3%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLF 117
A + F++A + F+H+ +Y ++ L R + + L E + N +K +
Sbjct: 43 AFEFFNWASR--NGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFC 100
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
T++R+YG AG A+K F ++ V SV + N+LL L++ R ++ H +F
Sbjct: 101 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 160
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V P+ +T NILI+ CK V+ R EM P++VT+ T++ G G +
Sbjct: 161 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 220
Query: 238 NAKRVFGDILD--RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V ++ + PD TYT L+ GY + +A+ V +EM G++PN++TY
Sbjct: 221 IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 280
Query: 296 MIEAFCKGKKSGEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I+ C+ +K + + +L + R +VP + +++ C+ G ++A +++K++
Sbjct: 281 LIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKEL 340
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--------ERGSIPSLLTYNTLIAGMCE 406
PD+A S +I LC+ G A++LFD+ + G P + YN + +C+
Sbjct: 341 KVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCK 400
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + +A R++ +++KG + + +Y LI G CK G + G ++L ML + P+ +
Sbjct: 401 NGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFET 459
Query: 467 FSLLIEGLYESG 478
+ LLI G + G
Sbjct: 460 YVLLINGFLQKG 471
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 162/330 (49%), Gaps = 12/330 (3%)
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
CN L+++ AI++ M S G+ P+++T ++L + RG A VF ++
Sbjct: 100 CNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMC 159
Query: 248 DR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G PD T+ +L+ G+ K + + + EM EP+ VTY +++ C+ K
Sbjct: 160 GTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKV 219
Query: 307 GEARNLLDDMLQR--KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
A N++ M+++ P ++ C + ++++A +++ ++ + P++ +
Sbjct: 220 RIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYN 279
Query: 365 TIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T+I LC+ K + K++ RG +P TYNTL+ C++ EA +++ M E
Sbjct: 280 TLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKE 339
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK-------GCFPNKTSFSLLIEGLY 475
V+P+ TY++LI+ C+ G+ + ++ +++ D+ GC P +++ + + L
Sbjct: 340 LKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLC 399
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLL 505
++G + +V G+ + S+ L+
Sbjct: 400 KNGKTHKAERVFRQLMKKGTQDPPSYKTLI 429
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 211/480 (43%), Gaps = 59/480 (12%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR----AFDAVESLLTELKQ-NPEIK 111
+D + F +F N + TY++++ L RA A + V+ ++ ++K +P++
Sbjct: 184 VDEGFRFFKEMSRF--NCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVV 241
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
+ T++R Y + + A+ F + ++ + + NTL+ L + +++D + +
Sbjct: 242 T----YTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEI 297
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+ VP+ T N L+ A C + + A+++ +M + + P+ T++ ++
Sbjct: 298 LGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLC 357
Query: 232 WRGDIENAKRVFG-----DIL--DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
RGD E A+++F DIL D G P Y + D K G+ A +V ++
Sbjct: 358 QRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKK 417
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G + + +Y +I CK LL ML+R YVP +I+ ++G+ A
Sbjct: 418 GTQ-DPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILA 476
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCK---------------EGKIWEAKKLFDEFER- 388
+ +R+L+ + +P ++ +I+ L K + KI + L R
Sbjct: 477 YKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRL 536
Query: 389 --GS--------IPSLLTYN-------TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
GS I LL N LI +C++ +L +A ++ +EKG ++
Sbjct: 537 LFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINV 596
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL---YESGNEGEVGKVVS 488
N++I+G CK+ E + +++K N S L EGL E+G E K VS
Sbjct: 597 CNVVIEGLCKMKRPLEAFGLYYMLVEKS---NHQQLSCL-EGLRTALEAGGRSEEAKFVS 652
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 40/267 (14%)
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ Y G +A+K+ M+ +GV P+ +T+ ++ K ++ A ++ D+M
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM--- 158
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
C + PD + +I CK + E
Sbjct: 159 -------------------------CGTY------GVTPDTYTFNILIRGFCKNSMVDEG 187
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEK--GVEPNVFTYNMLI 436
+ F E R + P ++TYNTL+ G+C + ++ A + MV+K + P+V TY L+
Sbjct: 188 FRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLV 247
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+G+C E + + EEM+ +G PN +++ LI+GL E ++ +++ A
Sbjct: 248 RGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGF 307
Query: 497 ESDSWNFLLTRIVSDLDSGAGALDELL 523
D+ + + + AG DE L
Sbjct: 308 VPDTCTY---NTLMNAQCDAGNFDEAL 331
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 162/377 (42%), Gaps = 13/377 (3%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
+Q +D AL +F N TY+++I L + FD ++ +L
Sbjct: 253 KQEIDEALVVFEEM--VSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPD 310
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T++ AG + A+K F ++++ VQ + + L+ L Q ++ +F
Sbjct: 311 TCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFD 370
Query: 174 NSRHKFKVV------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ ++ P V N + LCK A RV ++ G + ++ T++
Sbjct: 371 KLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG-TQDPPSYKTLI 429
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ G E ++ +L R +VPD TY +L++G+++ G A K ++ M +
Sbjct: 430 IGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYL 489
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P + ++ K + E+ + + M+ RK + L + LL G A ++
Sbjct: 490 PKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQI 549
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCE 406
+ L M D +I ++C+ GK+ +A+K+ E+G + N +I G+C+
Sbjct: 550 VELLYDNGYMVD---MEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCK 606
Query: 407 SAELTEAGRLWDDMVEK 423
EA L+ +VEK
Sbjct: 607 MKRPLEAFGLYYMLVEK 623
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 201/416 (48%), Gaps = 39/416 (9%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V V + N L++ L + + D M + V P+ T N ++ LCK E A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDR-GVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+L M P+ T+ T++ G + +++ AK + + + G+VPD TY++L DG
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K GR+ +A +++ EM NG PN VTY +I+ CK K+ +A LL+ ++ +VP
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
++D LC+EG+++ A ++ + +L++ C P + ++ LC+ G++ EA +F
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244
Query: 385 EFE----------------------------------RGSIPSLLTYNTLIAGMCESAEL 410
E RG+ P + YN L+ G C+ L
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT-PYIDVYNALMDGYCKEGRL 303
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
E +++DM +G PN+ TYN+++ G CK G E LE M GC P+ S++++
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363
Query: 471 IEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELL 523
I+GL+++ E +V+ +G ++ ++N L+ + + D G L ++
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 419
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 200/436 (45%), Gaps = 18/436 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N TY+++I L +A + LL L + P++ + ++ GR + A
Sbjct: 149 NLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV----TYTIIVDGLCKEGRLDKA 204
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+K + K SV + L+ L + R D H +FK K + L+
Sbjct: 205 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK-DCTADALAYVSLVN 263
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK + A +V+D + P + + ++ GY G ++ VF D+ RG VP
Sbjct: 264 GYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP 320
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TY ++MDG K G++ +A ++ M G P+ V+Y ++I+ K K EAR +L
Sbjct: 321 NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 380
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D M+Q P + ++ C+E + +DA + K +++ PDN +T+I L +
Sbjct: 381 DQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQT 440
Query: 374 GKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++ +A +L E R + + TYNT+I +C+ L +A L D M GVE N T
Sbjct: 441 NRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVT 500
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMA 490
YN+ I CK G E +L EM ++ S++ +I GL ++ K+ M
Sbjct: 501 YNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMV 557
Query: 491 TASG-SVESDSWNFLL 505
G + S ++N L+
Sbjct: 558 AVKGLCITSHTFNLLI 573
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 210/487 (43%), Gaps = 83/487 (17%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V + ++ LD AL++ G + + TY +++ L R D + E+
Sbjct: 191 IVDGLCKEGRLDKALKMVE--GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM-V 247
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + +++++ Y + R + A K ++ + N L++ + R D
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKV---VDGIRGTPYIDVYNALMDGYCKEGRLD 304
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ +F++ + VPN+ T NI++ LCK V+ A L+ M S G VP++V++ I
Sbjct: 305 EIPNVFEDMACR-GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G + A++V ++ G PDA TY LM + K R DAV ++ M GV
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC--------CK-------- 330
+P+ VTY +I + + G+A L+ +ML+ V S+ CK
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483
Query: 331 --------------------VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
ID LC+EG++++A L + + + D +T+I L
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGL 540
Query: 371 CKEGKIWEAKKLFDEF-------------------------------------ERGSIPS 393
CK ++ A KL E +RG PS
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN +I +C+ ++ +A L+D+M +G+ + +Y +LI G C G KE +++LE
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 660
Query: 454 EMLDKGC 460
EM C
Sbjct: 661 EMASSDC 667
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 130/236 (55%), Gaps = 1/236 (0%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+R PD TY +L+DG K + A +++ EM D GV P+ VT+ +++ CK K
Sbjct: 3 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A +LL M +R PS +I LC++ V+ A L + +PD S +
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK G+I EA +L E G P+L+TYNTLI G+C++++ +A L + +V G
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
P+V TY +++ G CK G + ++++E ML +GC P+ +++ L+EGL +G E
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDE 238
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M + V P+ TY ++I+ CK K+ +A +L +M+ R P + ++D LC+ GK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNT 399
E A L + +NC P +T+I LCK+ + AK L DEF G +P ++TY+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L G+C+ + EA L +M G PN+ TYN LI G CK ++ +LE ++ G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVV 487
P+ +++++++GL + G + K+V
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMV 208
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%)
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
ER P + TYN LI G+C++++ +A + +MV++GV P+ T+N ++ G CK G +
Sbjct: 3 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+L M ++ C P+ +++ LI GL + N +V +SG V
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV 112
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 193/352 (54%), Gaps = 3/352 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G E A + + ++ ++ SV SLN++L ++ + + MF ++ + NVFT
Sbjct: 312 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES--GLANVFT 369
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N L+ LCK+ + A + DE+ + G+ PN+V++ I+ G+ + +I A +V+ ++L
Sbjct: 370 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 429
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
D G+ P+A T+T+LMDGY K G + +A + M+D + P + T G++I+ CK +S
Sbjct: 430 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 489
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
E R+L + + + +VP+ +ID +EG + A +++ + P +++I
Sbjct: 490 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLI 549
Query: 368 HWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
CK I A KL ++ +R + + Y TLI G C+ ++ A L +++ G+
Sbjct: 550 DGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 609
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
PN F YN +I GF + N +E I + ++M+++G + +++ LI+GL +SG
Sbjct: 610 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 661
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 71/367 (19%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA- 239
+ PNV + N +I C+KD++ A +V EM G PN VT T ++ GY +GDIENA
Sbjct: 398 ISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAF 457
Query: 240 ----------------------------------KRVFGDILDRGWVPDATTYTVLMDGY 265
+ +F + +G+VP Y ++DG+
Sbjct: 458 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 517
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
IK G + A V EM + G+ P+ VTY +I+ FCKG A LL+DM ++
Sbjct: 518 IKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 577
Query: 326 ALCCKVIDLLCEE-----------------------------------GKVEDACELWKR 350
+ID C+ VE+A +L+K+
Sbjct: 578 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 637
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAE 409
++ + D +++I L K G++ A + E +G +P + LI G+C +
Sbjct: 638 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 697
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
A ++ +DM K + P+V YN LI G K GN +E R+ +EMLD+G P+ ++ +
Sbjct: 698 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDI 757
Query: 470 LIEGLYE 476
L+ G ++
Sbjct: 758 LVNGKFK 764
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 5/366 (1%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N +Y++II R +A + E+ N F ++ Y G E A
Sbjct: 399 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG-FTPNAVTFTILMDGYFKKGDIENAF 457
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
F R++ N+ + +L ++ L + R ++ L K F VP N +I
Sbjct: 458 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF--VPTCMPYNTIID 515
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
K+ ++ A V EM +G+ P+ VT+T+++ G+ +I+ A ++ D+ +G
Sbjct: 516 GFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKM 575
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y L+DG+ K + A ++++E+ G+ PN Y MI F EA +L
Sbjct: 576 DIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLY 635
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M+ +ID L + G++ A ++ +L K +PD+ + +I+ LC +
Sbjct: 636 KKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNK 695
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G+ A+K+ ++ + IPS+L YNTLIAG + L EA RL D+M+++G+ P+ TY
Sbjct: 696 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITY 755
Query: 433 NMLIQG 438
++L+ G
Sbjct: 756 DILVNG 761
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 158/304 (51%), Gaps = 20/304 (6%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+I + LC K + A+ +L EM + G +P T T+++ V G++ A R+ D+++
Sbjct: 197 SIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVN 256
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G + T LM GY G L A+ +++E+ ++G+ PN+VTY V+I+ CK +
Sbjct: 257 CGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEK 316
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS---- 364
A +M + K + SS I EG ++ C+ W+ M ++A+ S
Sbjct: 317 AFEFYSEM-KTKGIRSSVYSLNSI----LEGYLK--CQSWQNAFT---MFNDALESGLAN 366
Query: 365 -----TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
T++ WLCKEGK+ EA L+DE +G P++++YN +I G C + A +++
Sbjct: 367 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 426
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ G PN T+ +L+ G+ K G+ + I M D P T+ ++I+GL ++G
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486
Query: 479 NEGE 482
E
Sbjct: 487 RSFE 490
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 151/299 (50%), Gaps = 2/299 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P T +I A K+ +V A+R+ D+M + G NL T+++ GY +G++ +A
Sbjct: 225 IPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 284
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ +I + G VP+ TY+VL+DG K G + A + EM+ G+ + + ++E +
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + A + +D L+ ++ LC+EGK+ +AC LW ++ K P+
Sbjct: 345 KCQSWQNAFTMFNDALESGLANVFTF-NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVV 403
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ II C++ I A K++ E + G P+ +T+ L+ G + ++ A ++ M
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ + P T ++I+G CK G + EG + + + +G P ++ +I+G + GN
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 522
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 73/307 (23%)
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++DR V Y +D I+ G + +A + + + GVE ++ Y + + C
Sbjct: 149 FSCLMDR-LVECTKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCL 205
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL--------------- 347
SG A +LL +M ++P VI +EG V +A L
Sbjct: 206 KPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAV 265
Query: 348 WKRLLRKNCM--------------------PDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
L++ CM P+ S +I CK G I +A + + E +
Sbjct: 266 ATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK 325
Query: 388 ----RGSIPSL-------------------------------LTYNTLIAGMCESAELTE 412
R S+ SL T+NTL++ +C+ ++ E
Sbjct: 326 TKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNE 385
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A LWD+++ KG+ PNV +YN +I G C+ N ++ +EMLD G PN +F++L++
Sbjct: 386 ACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMD 445
Query: 473 GLYESGN 479
G ++ G+
Sbjct: 446 GYFKKGD 452
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + N+DLAL++ + + + Y ++I + R +
Sbjct: 540 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKR--KGLKMDIKAYGTLIDGFCKRRDMKSAH 597
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
LL EL+ + ++ ++I + E A+ + ++ + +++ +L++
Sbjct: 598 ELLNELR-GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDG 656
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L+++ R L++ + H EM S G++P
Sbjct: 657 LLKSGR-----LLYASDIHT-------------------------------EMLSKGILP 680
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ HT ++ G +G ENA+++ D+ + +P Y L+ G+ K G L +A ++
Sbjct: 681 DDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLH 740
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKG 303
DEM D G+ P+ +TY +++ KG
Sbjct: 741 DEMLDRGLVPDNITYDILVNGKFKG 765
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 209/445 (46%), Gaps = 51/445 (11%)
Query: 43 YPKRLVS-------MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
YP +VS ++ + LD A +F S + TY+SII L++ARA D
Sbjct: 198 YPPDVVSYNTVINGLLREGRQLDTAYHLFDQM--LDQGLSPDVVTYNSIISALSKARAMD 255
Query: 96 AVESLLTELKQNPEI--KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
+L + +N + + N +++ Y +G+P A+ F R+ + V+
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHN---SLLHGYCSSGKPNDAIGVFKRMCRDGVE------- 305
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
P+VFT N L+ LCK A ++ D M
Sbjct: 306 -----------------------------PDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G PN T+ T+L GY G + + ++ G PD + +L+ Y K G++ D
Sbjct: 337 RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDD 396
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ + +M G+ P+ VTYG++++A C K +A ++ P + + +I
Sbjct: 397 AMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIH 456
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP- 392
LC K + A EL ++ + P+N +T+++ LCKEG + AK +FD R +
Sbjct: 457 GLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQR 516
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++TYNTLI G C ++ EA +L + MV GV+PN TYN +I G+CK G ++ +
Sbjct: 517 DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYES 477
+M KG P ++S +++GL+++
Sbjct: 577 RQMASKGVNPGIVTYSTILQGLFQA 601
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 187/425 (44%), Gaps = 45/425 (10%)
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRS-----VR 150
E++ L++ P + C N+F I GL R + A+ + + R V
Sbjct: 144 EAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVV 203
Query: 151 SLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
S NT++N L++ R D + +F + + P+V T N +I AL K ++ A VL
Sbjct: 204 SYNTVINGLLREGRQLDTAYHLFDQMLDQ-GLSPDVVTYNSIISALSKARAMDKAAVVLV 262
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M G +PN +TH ++L GY G +A VF + G PD TY LM K G
Sbjct: 263 RMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNG 322
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +A K+ D M G +PN TYG ++ + + +LLD M++ P +
Sbjct: 323 RSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFN 382
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I + GKV+DA L+ ++ R+ PD ++ LC GK+ +A F
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN-------------------- 428
G P + + LI G+C + +A L +M+ +G+ PN
Sbjct: 443 GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARA 502
Query: 429 ---------------VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
V TYN LI G+C G E ++LE M+ G PN+ +++ +I G
Sbjct: 503 KNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMING 562
Query: 474 LYESG 478
++G
Sbjct: 563 YCKNG 567
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 159/315 (50%), Gaps = 12/315 (3%)
Query: 186 FTCNILIKALCKKDDVEGAIRV-LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF- 243
T + L+KALC K A+ + L MP +G PN+ ++T +L G + A +
Sbjct: 127 ITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLH 186
Query: 244 ----GDILDRGWVPDATTYTVLMDGYIKLGRLTD-AVKVMDEMEDNGVEPNEVTYGVMIE 298
D G+ PD +Y +++G ++ GR D A + D+M D G+ P+ VTY +I
Sbjct: 187 TMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIIS 246
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A K + +A +L M++ +P+ ++ C GK DA ++KR+ R P
Sbjct: 247 ALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEP 306
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +T++ +LCK G+ EA+K+FD +RG P+ TY TL+ G L + L
Sbjct: 307 DVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLL 366
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D MV G++P+ + +N+LI + K G + + + +M +G P+ ++ ++++ L
Sbjct: 367 DMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMV 426
Query: 478 GN----EGEVGKVVS 488
G + G+++S
Sbjct: 427 GKVDDAMAQFGRLIS 441
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 150/294 (51%), Gaps = 9/294 (3%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PNL+T++ ++ G ++ A G ++ GW +A T++ L+ R ++A+ +
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148
Query: 278 -MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML-----QRKYVPSSALCCKV 331
+ M G PN +Y ++++ C +S +A +LL M+ + Y P V
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208
Query: 332 IDLLCEEGK-VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK-LFDEFERG 389
I+ L EG+ ++ A L+ ++L + PD ++II L K + +A L + G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
++P+ +T+N+L+ G C S + +A ++ M GVEP+VFTYN L+ CK G + E
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+I + M+ +G PN ++ L+ G G+ ++ ++ M +G ++ D + F
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNG-IQPDHYIF 381
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 181/413 (43%), Gaps = 3/413 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++H A + + LL + +N I+ +F +I Y G+ + A+
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRN-GIQPDHYIFNILIGTYTKHGKVDDAMLL 400
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + + + +++AL + D F + + P+ LI LC
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE-GLTPDAVVFRNLIHGLC 459
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+D + A + EM G+ PN + T+L G + AK +F ++ D
Sbjct: 460 ARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVI 519
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+DGY G++ +A K+++ M +GV+PNEVTY MI +CK + +A +L M
Sbjct: 520 TYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQM 579
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++ L + + A EL+ +++ D + I+ LC+
Sbjct: 580 ASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCT 639
Query: 377 WEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A ++F T+N +I + + EA L+ ++ +G+ PNV TY ++
Sbjct: 640 DDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 699
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
++ + G +E + + GC N + L+ L + G + G +S
Sbjct: 700 MKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLS 752
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 209/433 (48%), Gaps = 9/433 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY+ +IH L + F +E LK + C N F +I Y A+
Sbjct: 278 NLITYNVLIHGLCK---FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIK 193
+ +EK N+ S S ++N L K L + L+ K + K PNV + LI
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK--PNVVVYSTLIM 392
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+ +E A R+LD M G+ P++ + I+ G +E A +I RG P
Sbjct: 393 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 452
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
DA T+ + GY K G++T+A K DEM D+G+ PN Y V+I K EA ++
Sbjct: 453 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 512
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ +P C I L + G+V++A +++ L K +PD S++I CK+
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ +A +L DE +G P++ YN L+ G+C+S ++ A +L+D M EKG+EP+ TY
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+ +I G+CK N E + EM KG P+ ++ L+ G + G+ + +
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 692
Query: 493 SGSVESDSWNFLL 505
G + S+N L+
Sbjct: 693 KGFATTLSFNTLI 705
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 202/417 (48%), Gaps = 38/417 (9%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L+ +I + AG A+ F + V V++ + ++ L++N R +F
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ K +VP+VFT + LI CK+ +VE A + DEM G+ PN+ + ++ G GD
Sbjct: 551 KEK-GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 609
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I+ A+++F + ++G PD+ TY+ ++DGY K + +A + EM GV+P+ Y
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ CK +A NL +MLQ+ + + + +ID C+ K+++A +L++ ++ K
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQEASQLFQEMIAKQ 728
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE---------------------------- 387
MPD+ +T+I W CK GK+ EA LF E +
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788
Query: 388 --------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+G P +TY +I C+ L EA +L D++V KG+ +++LI
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK + E ++L+EM + G P+ + S L+ +E+G E +V + G V
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLV 905
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 218/447 (48%), Gaps = 47/447 (10%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++II L++A + + L E+ Q +K F I Y G+ A K F +
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 480
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLM-----FKNSRHKFKVVPNVFTCNILIKAL 195
+ + N L L+ N + +LM F++ H V+P+V TC+ I L
Sbjct: 481 ----LDHGLMPNNPLYTVLI-NGHFKAGNLMEALSIFRH-LHALGVLPDVQTCSAFIHGL 534
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
K V+ A++V E+ G+VP++ T+++++ G+ +G++E A + ++ +G P+
Sbjct: 535 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+DG K G + A K+ D M + G+EP+ VTY MI+ +CK + EA +L +
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654
Query: 316 MLQRKYVPSSAL-------CCK---------------------------VIDLLCEEGKV 341
M + P S + CCK +ID C+ K+
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 714
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
++A +L++ ++ K MPD+ +T+I W CK GK+ EA LF E ER I +TY +L
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G + + +E L++ MV KGV+P+ TY ++I CK N E ++ +E++ KG
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVV 487
T LLI L + + E K++
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLL 861
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 162/314 (51%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++PN +LI K ++ A+ + + ++G++P++ T + + G + G ++ A
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+VF ++ ++G VPD TY+ L+ G+ K G + A ++ DEM G+ PN Y +++
Sbjct: 545 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK AR L D M ++ P S +ID C+ V +A L+ + K P +
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 664
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + ++H CKEG + +A LF E + + L++NTLI G C+S ++ EA +L+ +M
Sbjct: 665 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEM 724
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ K + P+ TY +I CK G +E + +EM ++ + +++ L+ G + G
Sbjct: 725 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQS 784
Query: 481 GEVGKVVSMATASG 494
EV + A G
Sbjct: 785 SEVFALFEKMVAKG 798
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 218/460 (47%), Gaps = 19/460 (4%)
Query: 28 TITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLA-LQIFHYAGKFHPNFSHNYDTYHSIIH 86
TI V+ I P +L P + +++ + Q D L F Y + D++ +
Sbjct: 56 TIMVSSHI---PSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAV 112
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVI---RNYGLAGRP---ELAVKTFLRI 140
+L + F +LT++ + P ++ +V+ RNYG P ++ + ++ R+
Sbjct: 113 QLCNSELFGLANGVLTQMIRTP--YSSSSILDSVLFWFRNYG-GSSPVVFDILIDSYKRM 169
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ + N A + L+ S + +VPN +T I+ LC+
Sbjct: 170 GMLD-----EAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKR 224
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A +EM G+ P+ + ++ G++ GDI+ R+ ++ G + TY V
Sbjct: 225 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 284
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G K G++ A +++ M G +PN T+ ++IE +C+ G A LLD+M +R
Sbjct: 285 LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 344
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VPS+ +I+ LC + A +L +++ P+ + ST+I EG+I EA+
Sbjct: 345 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 404
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+L D G P + YN +I+ + ++ ++ EA ++ +G++P+ T+ I G+
Sbjct: 405 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 464
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
K G E + +EMLD G PN +++LI G +++GN
Sbjct: 465 SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 504
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 2/259 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P+ F N L+ CK+ D+E A+ + EM G L + T++ GY I+ A
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEAS 718
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F +++ + +PD TYT ++D + K G++ +A + EM++ + + VTY ++ +
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 778
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K +S E L + M+ + P VI C+E + +A +L ++ K +
Sbjct: 779 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 838
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
I +I LCK + EA KL DE E G PSL +TL+ E+ ++ EA R+++
Sbjct: 839 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 898
Query: 420 MVEKGVEPNVFTYNMLIQG 438
+ G+ P+ T L+ G
Sbjct: 899 VKSLGLVPDTTTLIDLVNG 917
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
C + + K +P+ + I LC+ ++ EAK F+E ++ G P + LI G
Sbjct: 194 CNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 253
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
++ E R+ D MV G+ N+ TYN+LI G CK G ++ IL+ M+ GC PN
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 464 KTSFSLLIEGLYESGNEG 481
+F LLIEG N G
Sbjct: 314 SRTFCLLIEGYCREHNMG 331
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 195/383 (50%), Gaps = 37/383 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ + LL+A+ + ++D+V + + N +T +ILI
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGIPHNHYTYSILI 123
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G PN+VT +++L GY I A + + G+
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T+ L+ G + ++A+ ++D M G +P+ VTYGV++ CK + A NL
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC- 371
L+ M Q K P + +ID LC+ ++DA L+K + K P+ S++I LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 372 ----------------------------------KEGKIWEAKKLFDEFERGSI-PSLLT 396
KEGK+ EA+KL+DE + SI PS++T
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y++LI G C L EA ++++ MV K P+V TYN LI+GFCK +EG+ + EM
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 457 DKGCFPNKTSFSLLIEGLYESGN 479
+G N ++++LI+GL+++G+
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGD 446
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 224/464 (48%), Gaps = 25/464 (5%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQ---------NLDLALQIFHYAGKFHPNFSHNYDT 80
TV+P + +R + + S +R++ LD A+ +F K P S
Sbjct: 27 TVSPSFSFFWRRAFSGK-TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPS--IIE 83
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ ++ +A+ FD V SL E QN I + +I + + LA+ ++
Sbjct: 84 FSKLLSAIAKMNKFDVVISL-GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
K + ++ +L++LLN +KR LV MF PN T N LI L
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ-----PNTVTFNTLIHGLF 197
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ A+ ++D M + G P+LVT+ ++ G RGD + A + + P
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y ++DG K + DA+ + EME G+ PN VTY +I C + +A LL DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++RK P +ID +EGK+ +A +L+ +++++ P S++I+ C ++
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 377 WEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EAK++F EF + P ++TYNTLI G C+ + E ++ +M ++G+ N TYN+
Sbjct: 378 DEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LIQG + G+ I +EM+ G PN +++ L++GL ++G
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 228/503 (45%), Gaps = 44/503 (8%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK--FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ R+ L LAL + K + PN + H + A V+ +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
Q + F T+I L + A+ R+ Q + + ++N L +
Sbjct: 182 YQPNTVT-----FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
DL + N + K+ P V N +I LCK ++ A+ + EM + G+ PN+VT++
Sbjct: 237 TDLAFNLL-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ G +A R+ D+++R PD T++ L+D ++K G+L +A K+ DEM
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED- 343
++P+ VTY +I FC + EA+ + + M+ + P +I C+ +VE+
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 344 ----------------------------------ACELWKRLLRKNCMPDNAISSTIIHW 369
A E++K ++ P+ +T++
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK GK+ +A +F+ +R + P++ TYN +I GMC++ ++ + L+ ++ KGV+P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
V YN +I GFC+ G+ +E + +EM + G PN ++ LI G+ +++
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 489 MATASGSVESDSWNFLLTRIVSD 511
+ G S L+T ++ D
Sbjct: 596 EMRSCGFAGDASTIGLVTNMLHD 618
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 10/269 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDA 96
P + L++ LD A Q+F + H P+ TY+++I + + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV----TYNTLIKGFCKYKRVEE 414
Query: 97 VESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ E+ Q + G + + +I+ AG ++A + F + V ++ + NTL
Sbjct: 415 GMEVFREMSQRGLV--GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L+ L +N + + ++F+ + K+ P ++T NI+I+ +CK VE + + G
Sbjct: 473 LDGLCKNGKLEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++V + T++ G+ +G E A +F ++ + G +P++ Y L+ ++ G +
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ EM G + T G++ G+
Sbjct: 592 ELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLT 396
E K++DA L+ +++ P S ++ + K K L ++ + IP + T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+ LI C ++L A + M++ G EPN+ T + L+ G+C E + ++++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G PN +F+ LI GL+ E ++ A G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 198/381 (51%), Gaps = 2/381 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+IR + G + + F +E+ +V + NTL++A + R D + K+ K
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK- 74
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ PN+ + N++I LC++ ++ A +L+EM G P+ VT+ T+L GY G+ A
Sbjct: 75 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 134
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ +++ G P TYT L++ K L A++ D+M G+ PNE TY +I+
Sbjct: 135 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
F + EA +L++M + + PS I C ++E+A + + ++ K PD
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
STII C++G++ A ++ E E+G P +TY++LI G+CE LTEA L
Sbjct: 255 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 314
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ G+ P+ FTY LI +C G+ + + + +EM+ KG P+ ++S+LI GL +
Sbjct: 315 EMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 374
Query: 479 NEGEVGKVVSMATASGSVESD 499
E +++ SV SD
Sbjct: 375 RTREAKRLLFKLIYEESVPSD 395
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 166/300 (55%), Gaps = 1/300 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ +V PNV+T NILI+ C +++ + EM G +PN+VT+ T++ Y G I+
Sbjct: 3 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + + +G P+ +Y V+++G + G + +A ++++EM G P+EVTY ++
Sbjct: 63 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+CK +A + +M++ PS +I+ +C+ + A E + ++ +
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 182
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P+ +T+I ++G + EA ++ +E E G PS++TYN I G C + EA +
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+MVEKG+ P+V +Y+ +I GFC+ G ++ +EM++KG P+ ++S LI+GL E
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 203/428 (47%), Gaps = 18/428 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+ II+ L R + +L E+ E + T++ Y G A+
Sbjct: 79 NLISYNVIINGLCREGSMKEAWEILEEMGYKG-FTPDEVTYNTLLNGYCKEGNFHQALVI 137
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + V SV + L+N++ + + + F R + + PN T LI
Sbjct: 138 HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFS 196
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + A R+L+EM G P++VT+ + G+ +E A V +++++G PD
Sbjct: 197 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV 256
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y+ ++ G+ + G L A ++ EM + GV P+ VTY +I+ C+ ++ EA +L +M
Sbjct: 257 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 316
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L P +I+ C EG + A L ++ K +PD S +I+ L K+ +
Sbjct: 317 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 376
Query: 377 WEAKKL-FDEFERGSIPSLLTYNTLI---------------AGMCESAELTEAGRLWDDM 420
EAK+L F S+PS +TY+TLI G C + EA R+++ M
Sbjct: 377 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 436
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
VE+ +P YN++I G C+ GN + + +EM+ G P+ + LI+ L++ G
Sbjct: 437 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMN 496
Query: 481 GEVGKVVS 488
E+ +V+
Sbjct: 497 EEMSEVIG 504
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 246/513 (47%), Gaps = 47/513 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ + R+ ++ A +I G + F+ + TY+++++ + F
Sbjct: 78 PNLISYNVIINGLCREGSMKEAWEILEEMG--YKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ E+ +N P + + +I + A A++ F ++ ++ + R+ TL
Sbjct: 136 VIHAEMVRNGVSPSVVT----YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191
Query: 156 LNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
++ + N+ Y +++ M ++ P+V T N I C + +E A+ V+ EM
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESG-----FSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ P++V+++TI+ G+ +G+++ A ++ +++++G PDA TY+ L+ G ++ RL
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
T+A + EM D G+ P+E TY +I A+C +A +L D+M+ + ++P + +
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 366
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH---------------WLCKEGKI 376
I+ L ++ + +A L +L+ + +P + T+I C +G +
Sbjct: 367 INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLM 426
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA ++F+ ER P YN +I G C L +A L+ +M+ G P+ T L
Sbjct: 427 HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 486
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS-LLIEGLYESGNEGEVGKV-------- 486
I+ K G +E ++ + L + C N+ + +L+E ++ GN V V
Sbjct: 487 IKALFKEGMNEEMSEVIGDTL-RSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNKLS 545
Query: 487 ---VSMATASGSVESDSWNFLLTRIVSDLDSGA 516
V+ + G++ S L+RI+++ D A
Sbjct: 546 LKCVASSVPPGALTQTSQKIFLSRIIANFDGTA 578
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P++ TYN LI G C EL + + +M G PNV TYN LI +CK+G E +
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFLL 505
L+ M KG PN S++++I GL G+ E +++ M + + ++N LL
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ V PNV+TYN+LI+GFC +G ++G+ EM GC PN +++ LI+ + G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 480 EGEV-GKVVSMATASGSVESDSWNFLL 505
E G + SM++ S+N ++
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVII 87
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 193/352 (54%), Gaps = 3/352 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G E A + + ++ ++ SV SLN++L ++ + + MF ++ + NVFT
Sbjct: 194 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES--GLANVFT 251
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N L+ LCK+ + A + DE+ + G+ PN+V++ I+ G+ + +I A +V+ ++L
Sbjct: 252 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 311
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
D G+ P+A T+T+LMDGY K G + +A + M+D + P + T G++I+ CK +S
Sbjct: 312 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 371
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
E R+L + + + +VP+ +ID +EG + A +++ + P +++I
Sbjct: 372 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLI 431
Query: 368 HWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
CK I A KL ++ +R + + Y TLI G C+ ++ A L +++ G+
Sbjct: 432 DGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 491
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
PN F YN +I GF + N +E I + ++M+++G + +++ LI+GL +SG
Sbjct: 492 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 543
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 178/400 (44%), Gaps = 72/400 (18%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V + NTLL+ L + + + ++ K + PNV + N +I C+KD++ A +V
Sbjct: 248 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAK-GISPNVVSYNNIILGHCRKDNINAACKV 306
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENA---------------------------- 239
EM G PN VT T ++ GY +GDIENA
Sbjct: 307 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 366
Query: 240 -------KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+ +F + +G+VP Y ++DG+IK G + A V EM + G+ P+ VT
Sbjct: 367 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 426
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE-------------- 338
Y +I+ FCKG A LL+DM ++ +ID C+
Sbjct: 427 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 486
Query: 339 ---------------------GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
VE+A +L+K+++ + D +++I L K G++
Sbjct: 487 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 546
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A + E +G +P + LI G+C + A ++ +DM K + P+V YN LI
Sbjct: 547 YASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLI 606
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
G K GN +E R+ +EMLD+G P+ ++ +L+ G ++
Sbjct: 607 AGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 5/366 (1%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N +Y++II R +A + E+ N F ++ Y G E A
Sbjct: 281 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG-FTPNAVTFTILMDGYFKKGDIENAF 339
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
F R++ N+ + +L ++ L + R ++ L K F VP N +I
Sbjct: 340 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGF--VPTCMPYNTIID 397
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
K+ ++ A V EM +G+ P+ VT+T+++ G+ +I+ A ++ D+ +G
Sbjct: 398 GFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKM 457
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y L+DG+ K + A ++++E+ G+ PN Y MI F EA +L
Sbjct: 458 DIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLY 517
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M+ +ID L + G++ A ++ +L K +PD+ + +I+ LC +
Sbjct: 518 KKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNK 577
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G+ A+K+ ++ + IPS+L YNTLIAG + L EA RL D+M+++G+ P+ TY
Sbjct: 578 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITY 637
Query: 433 NMLIQG 438
++L+ G
Sbjct: 638 DILVNG 643
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 164/320 (51%), Gaps = 20/320 (6%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+I + LC K + A+ +L EM + G +P T T+++ V G++ A R+ D+++
Sbjct: 79 SIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVN 138
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G + T LM GY G L A+ +++E+ ++G+ PN+VTY V+I+ CK +
Sbjct: 139 CGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEK 198
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS---- 364
A +M + K + SS I EG ++ C+ W+ M ++A+ S
Sbjct: 199 AFEFYSEM-KTKGIRSSVYSLNSI----LEGYLK--CQSWQNAFT---MFNDALESGLAN 248
Query: 365 -----TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
T++ WLCKEGK+ EA L+DE +G P++++YN +I G C + A +++
Sbjct: 249 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 308
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ G PN T+ +L+ G+ K G+ + I M D P T+ ++I+GL ++G
Sbjct: 309 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 368
Query: 479 NEGEVGKVVSMATASGSVES 498
E + + + G V +
Sbjct: 369 RSFEGRDLFNKFVSQGFVPT 388
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 159/334 (47%), Gaps = 35/334 (10%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P++ NIL+ A+ +K+ A + ++M +G+ + T +L + G+I A+
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 241 RVF------GDILDR-----------------------------GWVPDATTYTVLMDGY 265
+ F G LD+ GW+P T+T ++
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+K G + +A+++ D+M + G N +++ +C A L++++ + VP+
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ID C+ G +E A E + + K ++I+ K A +F++
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ ++ T+NTL++ +C+ ++ EA LWD+++ KG+ PNV +YN +I G C+ N
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++ +EMLD G PN +F++L++G ++ G+
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGD 334
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 38/313 (12%)
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
M P++ +L V + A+ + +L G D T V++ +K G + +A
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ + + GVE ++ Y + + C SG A +LL +M ++P
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIP------------ 108
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSL 394
P+ +S I + KEG + EA +L D+ G +L
Sbjct: 109 ----------------------PEGTFTSVITACV-KEGNVAEALRLKDDMVNCGKSMNL 145
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+L+ G C L A L +++ E G+ PN TY++LI G CK GN ++ E
Sbjct: 146 AVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSE 205
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--L 512
M KG + S + ++EG + + + + A SG ++N LL+ + + +
Sbjct: 206 MKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKM 265
Query: 513 DSGAGALDELLVK 525
+ DE++ K
Sbjct: 266 NEACNLWDEVIAK 278
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + N+DLAL++ + + + Y ++I + R +
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKR--KGLKMDIKAYGTLIDGFCKRRDMKSAH 479
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
LL EL+ + ++ ++I + E A+ + ++ + +++ +L++
Sbjct: 480 ELLNELR-GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDG 538
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L+++ R L++ + H EM S G++P
Sbjct: 539 LLKSGR-----LLYASDIHT-------------------------------EMLSKGILP 562
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ HT ++ G +G ENA+++ D+ + +P Y L+ G+ K G L +A ++
Sbjct: 563 DDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLH 622
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKG 303
DEM D G+ P+ +TY +++ KG
Sbjct: 623 DEMLDRGLVPDNITYDILVNGKFKG 647
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 203/426 (47%), Gaps = 39/426 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+SI+H L +ARA D E +L ++ N I+ E + +I Y GR + A K
Sbjct: 306 NVVTYNSIVHALCKARAMDKAELVLRQMFDN-SIQPDEVTYTAMIHGYSCLGRWKEAAK- 363
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
MFK + ++P++ T N L+ +LC
Sbjct: 364 ----------------------------------MFKEMTRE-GLIPDIVTFNSLMDSLC 388
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A + + + G P++++++ +L GY G + +F + D G V D+
Sbjct: 389 KHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSH 448
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+ +L++ + K G + +A+ + EM GV PN VTY +I A C+ + +A L M
Sbjct: 449 CFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC-MPDNAISSTIIHWLCKEGK 375
+ P++ + +I C G + A EL ++ + P+ S+IIH LC EG+
Sbjct: 509 ISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGR 568
Query: 376 IWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A+ +F+ G P + T+N+LI G C ++ +A + D MV G EP+V TY+
Sbjct: 569 VMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYST 628
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI G+ K G +G+ + EML K P ++SL+++GL+ +G K+ SG
Sbjct: 629 LINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688
Query: 495 SVESDS 500
+ S S
Sbjct: 689 TAMSIS 694
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 202/461 (43%), Gaps = 48/461 (10%)
Query: 111 KCGENLFITVIRNYGL-------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ G + + YG+ A RP+L F R+ + ++ NT L L K
Sbjct: 155 EAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAK 214
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM-GMVPNLVT 222
R D M + + VP+ F+ N +IK+LC + A+ +L M G P++V+
Sbjct: 215 RTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVS 274
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+T ++ G G+I A +F +++ +G VP+ TY ++ K + A V+ +M
Sbjct: 275 YTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMF 334
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
DN ++P+EVTY MI + + EA + +M + +P ++D LC+ + +
Sbjct: 335 DNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSK 394
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE--------------- 387
+A E++ + K PD S ++H EG+ + LF
Sbjct: 395 EAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILI 454
Query: 388 ---------------------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+G P+++TY T+IA +C L +A M+ G++
Sbjct: 455 NAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK 514
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC-FPNKTSFSLLIEGLYESGNEGEVGK 485
PN Y+ LIQGFC G+ + ++ EM+D+G PN T FS +I L G
Sbjct: 515 PNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQD 574
Query: 486 VVSMATASGS-VESDSWNFLLTR--IVSDLDSGAGALDELL 523
V ++ G + ++N L+ +V +D G LD ++
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMV 615
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 166/349 (47%), Gaps = 3/349 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L+NA + D L+F R + V PNV T +I ALC+ + A+ L +M
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQ-GVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGR 270
S+G+ PN V + +++ G+ GD+ AK + +++D+G P+ T ++ ++ GR
Sbjct: 509 ISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGR 568
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A V + + G P+ T+ +I+ +C K +A +LD M+ P
Sbjct: 569 VMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYST 628
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
+I+ + G+++D L++ +L K P S ++ L + G+ AKK+F E E G
Sbjct: 629 LINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ S+ TY ++ G+C + EA L+ + ++ + N +I K+ +E
Sbjct: 689 TAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAH 748
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ + G PN +++ ++I L + G+ E + S +G S
Sbjct: 749 DLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPS 797
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 180/387 (46%), Gaps = 18/387 (4%)
Query: 75 SHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
S N TY ++I L R R DA+E L + +K ++ ++I+ + G A
Sbjct: 479 SPNVVTYATVIAALCRMGRLADAMEKLSQMISIG--LKPNTVVYHSLIQGFCTHGDLIKA 536
Query: 134 VKTFLRIEKFNVQR-SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV------PNVF 186
+ + + R ++ ++++++L R N++ F +V P++F
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGR-------VMNAQDVFNLVIHIGDRPDIF 589
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI C ++ A VLD M S G P++VT++T++ GY G I++ +F ++
Sbjct: 590 TFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREM 649
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L + P TY++++DG + GR + A K+ EM ++G + TY ++++ C+ +
Sbjct: 650 LCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCT 709
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA L + A+ +I L + + E+A +L+ + +P+ + +
Sbjct: 710 DEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVM 769
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I L KEG + EA +F E+ G PS N +I + + E+ +AG + +
Sbjct: 770 IINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTII 829
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRIL 452
T ++LI F G +E I+ L
Sbjct: 830 SLEASTTSLLISLFASKGRYREQIKFL 856
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 214/423 (50%), Gaps = 13/423 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++S+I+ A F ++E +L +K + E FI + + YG A PE AV F R
Sbjct: 92 TFYSLINNYANLGDFKSLEKVLDRMKCEKRV-IFEKCFIVIFKAYGKAHLPEKAVDLFDR 150
Query: 140 IE-KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-----KFKVVPNVFTCNILIK 193
+ +F +R+ +S N++LN ++Q L H + H + PNV T N++IK
Sbjct: 151 MACEFECKRTGKSFNSVLNVIIQE---GLFHRALEFYNHVIGAKGVSISPNVLTFNLVIK 207
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
A+CK V+ AI+V +M P++ T+ T++ G I+ A + ++ G P
Sbjct: 208 AMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFP 267
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
T+ VL++G K G L+ A K++D M G PNEVTY +I C K +A +LL
Sbjct: 268 SPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLL 327
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVED-ACELWKRLLRKNCMPDNAISSTIIHWLCK 372
D M+ K VP+ +I+ L ++G+ D AC L R C+ + + ST+I L K
Sbjct: 328 DRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCV-NEYVYSTLISGLFK 386
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK EA LF E +G + + Y+ +I G+C + +A + +M KG PN +T
Sbjct: 387 EGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYT 446
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+ L++GF + GN+ + + ++M N+ +S+LI GL + G E V +
Sbjct: 447 CSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQML 506
Query: 492 ASG 494
G
Sbjct: 507 GKG 509
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 220/449 (48%), Gaps = 18/449 (4%)
Query: 47 LVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
++++I ++ AL+ + H G + S N T++ +I + + D + ++
Sbjct: 167 VLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMT 226
Query: 106 QNPEIKCGENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-- 161
KC +++ GL A R + AV ++ S + N L+N L +
Sbjct: 227 IR---KCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG 283
Query: 162 --NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
++ LV MF +PN T N LI LC K +E AI +LD M S VPN
Sbjct: 284 DLSRAAKLVDNMFLKG-----CIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPN 338
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+VT+ TI+ G V +G + V + +RG+ + Y+ L+ G K G+ +A+ +
Sbjct: 339 VVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFK 398
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM G E N + Y +I+ C+ K +A +L +M + P++ C ++ E G
Sbjct: 399 EMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAG 458
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYN 398
A E+WK + + N + S +IH LCK+GK+ EA ++ + +G P ++ Y+
Sbjct: 459 NSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYS 518
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
++I G+ + + +A +L+++M+ +G +P+V TYN+L+ CK + I +L ML
Sbjct: 519 SMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSML 578
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
D+GC P+ + ++ + L E + + G+
Sbjct: 579 DRGCDPDLVTCTIFLRMLREKLDPPQDGR 607
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 41/281 (14%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG---------- 303
D+T Y+ L++ Y LG KV+D M+ E + V+ +A+ K
Sbjct: 90 DSTFYS-LINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLF 148
Query: 304 ---------KKSGEARN-LLDDMLQR-------------------KYVPSSALCCKVIDL 334
K++G++ N +L+ ++Q P+ VI
Sbjct: 149 DRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKA 208
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
+C+ G V+DA ++++ + + C PD T++ LCK +I EA L DE + G PS
Sbjct: 209 MCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPS 268
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+T+N LI G+C+ +L+ A +L D+M KG PN TYN LI G C G ++ I +L+
Sbjct: 269 PVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLD 328
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
M+ C PN ++ +I GL + G + V+++ G
Sbjct: 329 RMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 26/251 (10%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKN 174
++ VI G+P+ AV+ + + + ++L+ + + V +
Sbjct: 411 VYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDM 470
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
++H F N ++LI LCK V+ A+ V +M G P++V +++++ G G
Sbjct: 471 AKHNF--TQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAG 528
Query: 235 DIENAKRVFGDILDRG--WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+E+A +++ ++L +G PD TY +L++ K ++ A+ +++ M D G +P+ VT
Sbjct: 529 LVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT 588
Query: 293 YGVMIEAFC-KGKKSGEARNLLDD--------------------MLQRKYVPSSALCCKV 331
+ + K + R LD+ MLQ+ P + +V
Sbjct: 589 CTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARV 648
Query: 332 IDLLCEEGKVE 342
++ LC+ KV+
Sbjct: 649 VENLCKPKKVQ 659
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 215/433 (49%), Gaps = 15/433 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ L +A D ++L ++ + +P +K + VI AGR E A +
Sbjct: 79 TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLK----TYTVVIDGLSKAGRVEEARRI 134
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS---RHKFKVVPNVFTCNILIK 193
F+ + + L+ L ++ + + + ++K + +H VP+V T LI
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194
Query: 194 ALCKKDDVEGAIRVLD-EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + A +V D E G +P+ VT+T+I+ G G +E F ++ +RG+
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PDA TY L+DG++K + A +V +M +G + VTY ++++ CK + EA
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M +R V + ++D C EG V A EL++R+L + C P+ + II LC+
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374
Query: 373 EGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG-RLWDDMVEKGVEPNVF 430
GK+ +A F++ +R P + T+N + G+C+ + G L++ MV +G PN+
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLH 434
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
+Y++L+ G C+ G + + I EM+ +G P+ F+ LI L +G E +V
Sbjct: 435 SYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL 494
Query: 491 TASGSVESDSWNF 503
+ D+W++
Sbjct: 495 ERRSA--PDAWSY 505
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 182/354 (51%), Gaps = 16/354 (4%)
Query: 141 EKFNV-QRSVR--------SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
E F+V +R+VR + N ++ L + +R D + K K K +P T L
Sbjct: 25 EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEK-KCLPTTVTYTAL 83
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ L K ++ A+ VL++M G P L T+T ++ G G +E A+R+F D+L G
Sbjct: 84 VDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 143
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEM----EDNGVEPNEVTYGVMIEAFCKGKKSG 307
PDA YT L+ G K G+ +A + E P+ VTY +I+ CK +
Sbjct: 144 RPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRIL 203
Query: 308 EARNLLDD-MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EAR + DD ++R ++P + +ID LC+ G+VE+ CE + + + PD + +
Sbjct: 204 EARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 263
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I K I +A +++ + + G++ S +TYN ++ G+C++ + EA + M E+G
Sbjct: 264 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 323
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
V TY+ L+ GFC GN + + MLD+GC PN S++++I GL +G
Sbjct: 324 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 164/306 (53%), Gaps = 6/306 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ ++I LC++ ++ A VL+ G P+ VT+ + G +++A ++
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ ++ +P TYT L+DG +K GRL +A+ V+++M + G P TY V+I+ K
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK----RLLRKNCMP 358
+ EAR + DML P + + +I LC+ GK E+A L+K R +P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
D +++I LCK G+I EA+++FD+ ERG IP +TY ++I G+C+ + E
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ +M +G EP+ TY LI GF K + R+ +ML G + +++++++GL +
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304
Query: 477 SGNEGE 482
+G E
Sbjct: 305 AGRVAE 310
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 195/493 (39%), Gaps = 95/493 (19%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF 74
LL+ + +C +T+T T LV + + LD A+ +
Sbjct: 64 LLKKMDEKKCLPTTVTYTA-------------LVDGLLKAGRLDEAMAVLEQM--VEKGN 108
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPEL 132
S TY +I L++A + + ++ N C + F+ +I+ +G+PE
Sbjct: 109 SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGN---GCRPDAFVYTALIKGLCKSGKPEE 165
Query: 133 AVKTF----LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
A + R V + +L++ L + R +F + + +P+ T
Sbjct: 166 AYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTY 225
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL- 247
+I LCK VE EM + G P+ VT+ ++ G++ I A RV+ +L
Sbjct: 226 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 285
Query: 248 ----------------------------------DRGWVPDATTYTVLMDGYIKLGRLTD 273
+RG V TY+ LMDG+ G ++
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS--------S 325
AV++ M D G EPN V+Y ++I C+ K +A + +LQR+ P
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLH 405
Query: 326 ALCCKV----------------------------IDLLCEEGKVEDACELWKRLLRKNCM 357
LC ++ +D +C G +E A E+++ ++ +
Sbjct: 406 GLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVA 465
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
PD + +T+I WLC G++ EA ++F E ER S P +Y +L+ G+ + EA L
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDGLSRCERMEEARLLS 525
Query: 418 DDMVEKGVEPNVF 430
M +G P +
Sbjct: 526 FHMKLQGCAPRHY 538
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
VI+ LC E ++++A + +R +R C PD + I LCK ++ +A +L + E+
Sbjct: 13 VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 72
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+P+ +TY L+ G+ ++ L EA + + MVEKG P + TY ++I G K G +E
Sbjct: 73 CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 132
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
RI +ML GC P+ ++ LI+GL +SG E + A A
Sbjct: 133 RIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANA 175
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
C PD + +I+ LC+E ++ EA + + R G P +TYN I G+C++ + +A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+L M EK P TY L+ G K G E + +LE+M++KG P +++++I+GL
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 475 YESGNEGEVGKV 486
++G E ++
Sbjct: 123 SKAGRVEEARRI 134
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P ++ + +I G+C L EA + + V G EP+ TYN+ I G CK + ++
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
L++M +K C P +++ L++GL ++G E V+ G +S +V D
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG----NSPTLKTYTVVID 120
Query: 512 LDSGAGALDE 521
S AG ++E
Sbjct: 121 GLSKAGRVEE 130
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 203/379 (53%), Gaps = 13/379 (3%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+E+ V + + NTL+NA + ++ + LV M + P +FT N LI L
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG-----LKPGLFTYNALINGL 304
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK+ E A RVLDEM +G+ PN T +L + D+ A+RVF ++L RG VPD
Sbjct: 305 CKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDL 364
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+++ ++ + + G L A+ ++M+ G+ P+ V Y ++I +C+ A + ++
Sbjct: 365 ISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNE 424
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++R V +++ LC ++DA EL+K ++ + PD +T+IH CK+G
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 484
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A LF+ S+ P ++TYNTL+ G C+ E+ +A LW DM+ + + P+ ++++
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI GFC +G E R+ +EM +KG P + + +I+G +GN + ++ + G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 495 SVESD--SWNFLLTRIVSD 511
V D ++N L+ V +
Sbjct: 605 -VPPDCITYNTLINSFVKE 622
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 167/322 (51%), Gaps = 1/322 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VP+ ILI C+ DDV GA+++ +EM G V ++VT+ T+L G +++A
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++++RG PD T T L+ GY K G +T A+ + + M ++P+ VTY +++ F
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + +A+ L DM+ R+ PS +I+ C G V +A LW + K P
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTL 574
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+TII + G + +A + G P +TYNTLI + A L ++
Sbjct: 575 VTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINN 634
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M E+G+ PN+ TYN ++ GF + G +E +L +M+DKG P+K++++ LI G N
Sbjct: 635 MEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDN 694
Query: 480 EGEVGKVVSMATASGSVESDSW 501
E +V G V D +
Sbjct: 695 MKEAFRVHDEMLQRGFVPDDKF 716
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 187/364 (51%), Gaps = 2/364 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F +IR Y A + + F + K S+ + N LL A+V+ DL ++++
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+V NV+T NI++ ALCK ++ L EM G+ +LVT+ T++ Y RG
Sbjct: 216 VKSGNIV-NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + + +G P TY L++G K G A +V+DEM G+ PN T+
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
M+ C+ + EA + ++MLQR VP ++ + G++ A ++++
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD I + +I+ C+ + A K+ +E ERG + ++TYNTL+ G+C L +A
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ +MVE+GV P+ +T LI G+CK GN + + + E M + P+ +++ L++G
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514
Query: 475 YESG 478
+ G
Sbjct: 515 CKVG 518
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 1/295 (0%)
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
L +N + V +V T N L+ LC+ ++ A + EM G+ P+ T TT++ G
Sbjct: 419 LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 478
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
Y G++ A +F + R PD TY LMDG+ K+G + A ++ +M + P+
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPS 538
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+++ ++I FC EA L D+M ++ P+ C +I G + A +
Sbjct: 539 YISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLN 598
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
++ + PD +T+I+ KE A L + ERG +P+L+TYN ++ G
Sbjct: 599 TMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHG 658
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ EA + M++KG+ P+ TY LI G+ N KE R+ +EML +G P+
Sbjct: 659 RMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 134/284 (47%), Gaps = 8/284 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++++ L R + D + L E+ + P+ T+I Y G A+
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT----LTTLIHGYCKDGNMTKALSL 491
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + +++ V + NTL++ + + ++ + + ++ P+ + +ILI C
Sbjct: 492 FETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR-EIFPSYISFSILINGFC 550
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
V A R+ DEM G+ P LVT TI+ GY+ G++ A ++ G PD
Sbjct: 551 SLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCI 610
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L++ ++K A +++ ME+ G+ PN VTY ++ F + + EA +L M
Sbjct: 611 TYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM 670
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ + P + +I+ + +++A + +L++ +PD+
Sbjct: 671 IDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 25/230 (10%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI--------------- 332
PN +I + KK EA++LL ++++ V + +I
Sbjct: 97 PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156
Query: 333 -DLL----CEEGKVEDACELWKRLLRKN--CMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
DLL + K+ + E ++ LLRK C+ NA ++ ++ + K G + A K++++
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQ-LLRKRGFCVSINACNA-LLGAIVKVGWVDLAWKVYED 214
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
F + G+I ++ T N ++ +C+ +L G +M EKGV ++ TYN L+ +C+ G
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
E +++ M KG P +++ LI GL + G+ +V+ G
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG 324
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 215/435 (49%), Gaps = 17/435 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIH------KLARARAFDAVESL 100
++S+ + +++A + YA F S T++ +++ KL +AR F
Sbjct: 220 MLSLFLKLNRMEMAWVL--YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIG---F 274
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
+ L P + + T+I Y G E A + + ++ + +L++ +
Sbjct: 275 MEGLGFKPNVVS----YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 330
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ R + +F + + +VPN T N LI C K D+E A DEM G++P++
Sbjct: 331 KEGRLEEASGLF-DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSV 389
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T+ ++ G + A + ++ +G +PDA TY +L++GY + G A + +E
Sbjct: 390 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 449
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G+EP VTY +I + + EA +L + +L + P + ++D C G
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 509
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNT 399
VE A L K + RK+ PD +T++ C+EGK+ EA+ L DE +R I P ++YNT
Sbjct: 510 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 569
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI+G ++ +A R+ D+M+ G P + TYN LI+ CK +L+EM++KG
Sbjct: 570 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 629
Query: 460 CFPNKTSFSLLIEGL 474
P+ +++ LIEG+
Sbjct: 630 ISPDDSTYLSLIEGM 644
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 204/388 (52%), Gaps = 9/388 (2%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E + +V S NT+++ + + R K + P+ +T LI +CK+
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK-GIEPDSYTYGSLISGMCKEG 333
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A + D+M +G+VPN VT+ T++ GY +GD+E A +++ +G +P +TY
Sbjct: 334 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 393
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ GR+ +A ++ EM G+ P+ +TY ++I + + + +A +L ++ML +
Sbjct: 394 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 453
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +I +L ++++A +L++++L + PD + + ++ C G + A
Sbjct: 454 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 513
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L E +R S+P +T+NTL+ G C ++ EA L D+M +G++P+ +YN LI G
Sbjct: 514 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 573
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ + G+ K+ R+ +EML G P +++ LI+ L ++ EG++ + + + +
Sbjct: 574 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN-QEGDLAEELLKEMVNKGISP 632
Query: 499 DSWNFLLTRIVSDLDSGAGALDELLVKN 526
D +L L G G +D L+ N
Sbjct: 633 DDSTYL------SLIEGMGNVDTLVEDN 654
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 3/355 (0%)
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
+A EL + L ++ +V+ S+ + L+ + +R D F + K +VP +
Sbjct: 157 IATNRELFDELTLSRDRLSVKSSI-VFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKI 214
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
TCN ++ K + +E A + EM + + + T ++ G ++ A+ G
Sbjct: 215 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 274
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G+ P+ +Y ++ GY G + A +++D M G+EP+ TYG +I CK +
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L D M++ VP++ +ID C +G +E A +++K MP + +
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++H L EG++ EA + E ++G IP +TYN LI G +A L ++M+ KG
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+EP TY LI + KE + E++LD+G P+ F+ +++G +GN
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 509
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 2/260 (0%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
DR V + + +L+ +L R +A K M++ G+ P T M+ F K +
Sbjct: 172 DRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRME 231
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A L +M + + + ++++LC+EGK++ A E + P+ +TII
Sbjct: 232 MAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTII 291
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
H G I A+++ D +G P TY +LI+GMC+ L EA L+D MVE G+
Sbjct: 292 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 351
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PN TYN LI G+C G+ + +EM+ KG P+ ++++LL+ L+ G GE +
Sbjct: 352 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 411
Query: 487 VSMATASGSV-ESDSWNFLL 505
+ G + ++ ++N L+
Sbjct: 412 IKEMRKKGIIPDAITYNILI 431
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 225/444 (50%), Gaps = 20/444 (4%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE-------- 109
D AL +F A SH ++H LARAR F +LL+ L + E
Sbjct: 85 DAALHLFRLAPSRPSLVSHA-----QLLHILARARRFHDARALLSSLPPHAEPLFPHLAE 139
Query: 110 ----IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
F ++R + AG+ A+ F + K + S+RS N LLN LVQ+
Sbjct: 140 VYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDP 199
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+ +++ R V+P+ FT I+ KA C+ V A+ ++EM MG+ NLV +
Sbjct: 200 GMAAMVYGQMRIA-GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA 258
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ Y G E+A+R+ + +G P+ TYT+L+ GY K GR+ +A +V+ EM++ G
Sbjct: 259 VMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
Query: 286 -VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+ +EV YG+MI +C+ + +A + ++M + + +I+ LC+ G++E+
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
++ + + PD +T+I C+EG + +A ++ R G + LTYNTL+ G
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + +A RLW M+++GV PN + + L+ G K G ++ + + +E L +G N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498
Query: 464 KTSFSLLIEGLYESGNEGEVGKVV 487
+F+ +I GL + G E +++
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELL 522
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 211/487 (43%), Gaps = 72/487 (14%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y+++I+ L + + V+ +L E+ ++ ++ + + T+I Y G A +
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGMRPDKYSYNTLIDGYCREGSMRKAFEM 416
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + + + + NTLL D L LM K V PN +C+ L+
Sbjct: 417 CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG-----VAPNEISCSTLL 471
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
L K E A+ + E + G+ N++T T++ G G + A+ + + +
Sbjct: 472 DGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCP 531
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMED----------------------------- 283
PD+ TY L DGY KLG+L A +M++ME
Sbjct: 532 PDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDI 591
Query: 284 ------NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
G+ PN VTYG +I +CK EA NL +M+ P+ +C ++ +
Sbjct: 592 HSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYK 651
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISS--------------------------TIIHWLC 371
EGKV++A + ++L+ + +P +IS+ II LC
Sbjct: 652 EGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLC 711
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G+I +AK LF+ + +P TY++LI G S + EA L D M+ G+ PN+
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII 771
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TYN LI G CK G + + ++ KG PN +++ LI+ + G E K+
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 491 TASGSVE 497
G +E
Sbjct: 832 VEEGYME 838
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 201/454 (44%), Gaps = 53/454 (11%)
Query: 80 TYHSIIHKLARARAFD-AVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVK 135
TY++++ A D A+ LK+ EI C T++ AG+ E A+
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCS-----TLLDGLFKAGKTEQALN 485
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++V + NT++N L + R + + + + P+ T L
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK-ELRCPPDSLTYRTLFDGY 544
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK + A ++++M +G P++ + + G+ + ++ RG P+
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L+ G+ K G L +A + EM +NG+ PN ++ F K K EA +L
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664
Query: 316 MLQRKYVPSSALCCKVIDL--------------------------LCEEGKVEDACELWK 349
++ +P ++ ID LC+ G++ DA L++
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESA 408
L K +PDN S++IH G I EA L D G P+++TYN+LI G+C+S
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA----------------KEGIRIL 452
+L+ A L++ + KG+ PN TYN LI +CK G +E I++L
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLL 844
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
++M++ PN ++ LI G +SGN E+ K+
Sbjct: 845 DQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 878
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 197/443 (44%), Gaps = 34/443 (7%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ +F+ + AL + + + N T++++I+ L + E
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNL--WKETLARGLAKNVITFNTVINGLCKIGRMAEAE 519
Query: 99 SLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
LL +K E++C + + T+ Y G+ A ++E SV N+ +
Sbjct: 520 ELLDRMK---ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
K++ V+ + + + PN+ T LI CK+ ++ A + EM + GM
Sbjct: 577 TGHFIAKQWHKVNDIHSEMSAR-GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+ + ++ + G ++ A V +++ +P + T+ +D
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID---------KISH 686
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V+D + D V + V+I CK + +A++L + + ++++P + +I
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLL 395
G +++A L +L P+ +++I+ LCK GK+ A LF++ + +G P+ +
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806
Query: 396 TYNTLIAGMCESAELTEAGRL----------------WDDMVEKGVEPNVFTYNMLIQGF 439
TYNTLI C+ + TEA +L D M+E V+PN TY LI G+
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGY 866
Query: 440 CKIGNAKEGIRILEEMLDKGCFP 462
K GN +E ++ +EM +G P
Sbjct: 867 IKSGNMEEISKLYDEMHIRGLLP 889
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 169/357 (47%), Gaps = 27/357 (7%)
Query: 177 HKFKVVPN---VFTCNILIKALCKKDDVEGAIRVLDEMPSMG--MVPNL----------- 220
H F++ P+ + + L+ L + A +L +P + P+L
Sbjct: 89 HLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSA 148
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
V+ +L + G + +A VF + G P + L++ ++ G A V +
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM----LQRKYVPSSALCCKVIDLLC 336
M GV P+E T +M +A+C+ + +A +++M L+ V A V+D C
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA----VMDCYC 264
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP-SL 394
G EDA + + L RK P+ + ++ CK+G++ EA+++ E E G I
Sbjct: 265 GMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE 324
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ Y +I G C+ + +A R+ ++M + G+ N+F YN +I G CK+G +E ++L+E
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVS 510
M D G P+K S++ LI+G G+ + ++ M +G + + ++N LL S
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N++I LCK + A + + + + +P+ T+++++ G G I+ A + +L
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P+ TY L+ G K G+L+ AV + ++++ G+ PN +TY +I+ +CK K+ E
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L M+ EEG +E+A +L +++ N P+ T+IH
Sbjct: 824 AFKLKQKMV-------------------EEGYMEEAIKLLDQMIENNVDPNYITYCTLIH 864
Query: 369 WLCKEGKIWEAKKLFDEFE-RGSIPS 393
K G + E KL+DE RG +P+
Sbjct: 865 GYIKSGNMEEISKLYDEMHIRGLLPT 890
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N ++ L ++ R +F++ R+K + +P+ FT + LI ++ A + D M
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNK-RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
S G+ PN++T+ +++ G G + A +F + +G P+ TY L+D Y K G+ T
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 273 DA----------------VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+A +K++D+M +N V+PN +TY +I + K E L D+M
Sbjct: 823 EAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882
Query: 317 LQRKYVPSS 325
R +P++
Sbjct: 883 HIRGLLPTN 891
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 215/435 (49%), Gaps = 17/435 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIH------KLARARAFDAVESL 100
++S+ + +++A + YA F S T++ +++ KL +AR F
Sbjct: 198 MLSLFLKLNRMEMAWVL--YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIG---F 252
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
+ L P + + T+I Y G E A + + ++ + +L++ +
Sbjct: 253 MEGLGFKPNVVS----YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 308
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ R + +F + + +VPN T N LI C K D+E A DEM G++P++
Sbjct: 309 KEGRLEEASGLF-DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSV 367
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T+ ++ G + A + ++ +G +PDA TY +L++GY + G A + +E
Sbjct: 368 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 427
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G+EP VTY +I + + EA +L + +L + P + ++D C G
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 487
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNT 399
VE A L K + RK+ PD +T++ C+EGK+ EA+ L DE +R I P ++YNT
Sbjct: 488 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 547
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI+G ++ +A R+ D+M+ G P + TYN LI+ CK +L+EM++KG
Sbjct: 548 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 607
Query: 460 CFPNKTSFSLLIEGL 474
P+ +++ LIEG+
Sbjct: 608 ISPDDSTYLSLIEGM 622
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 204/389 (52%), Gaps = 9/389 (2%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E + +V S NT+++ + + R K + P+ +T LI +CK+
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK-GIEPDSYTYGSLISGMCKEG 311
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A + D+M +G+VPN VT+ T++ GY +GD+E A +++ +G +P +TY
Sbjct: 312 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 371
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ GR+ +A ++ EM G+ P+ +TY ++I + + + +A +L ++ML +
Sbjct: 372 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 431
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +I +L ++++A +L++++L + PD + + ++ C G + A
Sbjct: 432 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 491
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L E +R S+P +T+NTL+ G C ++ EA L D+M +G++P+ +YN LI G
Sbjct: 492 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 551
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ + G+ K+ R+ +EML G P +++ LI+ L ++ EG++ + + + +
Sbjct: 552 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN-QEGDLAEELLKEMVNKGISP 610
Query: 499 DSWNFLLTRIVSDLDSGAGALDELLVKNC 527
D +L L G G +D L+ N
Sbjct: 611 DDSTYL------SLIEGMGNVDTLVEDNA 633
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 3/355 (0%)
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
+A EL + L ++ +V+ S+ + L+ + +R D F + K +VP +
Sbjct: 135 IATNRELFDELTLSRDRLSVKSSI-VFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKI 192
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
TCN ++ K + +E A + EM + + + T ++ G ++ A+ G
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 252
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G+ P+ +Y ++ GY G + A +++D M G+EP+ TYG +I CK +
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L D M++ VP++ +ID C +G +E A +++K MP + +
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++H L EG++ EA + E ++G IP +TYN LI G +A L ++M+ KG
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+EP TY LI + KE + E++LD+G P+ F+ +++G +GN
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 487
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 2/260 (0%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
DR V + + +L+ +L R +A K M++ G+ P T M+ F K +
Sbjct: 150 DRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRME 209
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A L +M + + + ++++LC+EGK++ A E + P+ +TII
Sbjct: 210 MAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTII 269
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
H G I A+++ D +G P TY +LI+GMC+ L EA L+D MVE G+
Sbjct: 270 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 329
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PN TYN LI G+C G+ + +EM+ KG P+ ++++LL+ L+ G GE +
Sbjct: 330 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 389
Query: 487 VSMATASGSV-ESDSWNFLL 505
+ G + ++ ++N L+
Sbjct: 390 IKEMRKKGIIPDAITYNILI 409
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 222/477 (46%), Gaps = 55/477 (11%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL----KQNPEI 110
Q+ LAL+ F +A K F H + Y ++H L AR + ++L EL + P
Sbjct: 110 QDARLALRFFEWA-KGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSW 168
Query: 111 KCGENLFIT---VIRNYGL----------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+ L+ T + +G+ G E A + FL++ KF V RS N LL+
Sbjct: 169 DVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLH 228
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L + R DL FK+ + +VFT NI+I LCK+ D+E A + +M G
Sbjct: 229 RLSKVGRGDLSRKFFKDMGAA-GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFT 287
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++VT+ +++ G+ G ++ +F + D PD TY L++ + K R+ A +
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL--- 334
+ EM+ NG++PN VTY I+AFCK EA DM + P+ +ID
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407
Query: 335 --------------------------------LCEEGKVEDACELWKRLLRKNCMPDNAI 362
LCEEG++++A E+++ +L P+
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++H K ++ AK + E + I P LL Y T++ G+C + L EA L ++
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E G+ N Y L+ + K G A E + +LEEMLD G + ++ LI+GL +SG
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 216/476 (45%), Gaps = 77/476 (16%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I L + + SL T++K+ P+I + ++I +G G + +
Sbjct: 257 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVT----YNSLIDGHGKLGLLDECICI 312
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNS----------------- 175
F +++ + V + N L+N + +R ++ +H M N
Sbjct: 313 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 372
Query: 176 -------------RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ + PN FT LI A CK ++ A+++++E+ G+ N+VT
Sbjct: 373 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 432
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL-------------- 268
+T +L G G ++ A+ VF +L+ G P+ TYT L+ G+IK
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492
Query: 269 ---------------------GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
RL +A ++ E++++G+ N V Y +++A+ K ++
Sbjct: 493 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 552
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA LL++ML + + C +ID LC+ G V++A + R+ P+ A+ + ++
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK AKKLFDE ++G +P + Y LI G + L EA L D M+E G+E
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGME 672
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
++ Y LI G G ++ +L+EM+ KG P++ + LI+ Y G E
Sbjct: 673 LDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDE 728
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 197/449 (43%), Gaps = 22/449 (4%)
Query: 14 CLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFH 71
C+ + + A C IT L++ + + + A + H A
Sbjct: 311 CIFEQMKDADCDPDVITYNA-------------LINCFCKFERMPKAFEFLHEMKANGLK 357
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
PN TY + I + ++++ + E + ++I AG
Sbjct: 358 PNVV----TYSTFIDAFCKEGMLQEAIKFFVDMRR-VALTPNEFTYTSLIDANCKAGNLA 412
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A+K I + ++ +V + LL+ L + R +F+ + V PN T L
Sbjct: 413 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA-GVAPNQETYTAL 471
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ K ++E A +L EM + P+L+ + TIL G +E AK + G+I + G
Sbjct: 472 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+A YT LMD Y K G+ T+A+ +++EM D G+ EVTY +I+ CK EA +
Sbjct: 532 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMH 591
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
M + P+ A+ ++D LC+ E A +L+ +L K MPD + +I
Sbjct: 592 HFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 651
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G + EA L D E G L Y LI G+ S ++ +A L D+M+ KGV P+
Sbjct: 652 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 711
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
Y LI+ + +G E + + EM +G
Sbjct: 712 VYMCLIKKYYALGKVDEALELQNEMAKRG 740
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 1/279 (0%)
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
VP + + G +E A F + P + L+ K+GR + K
Sbjct: 182 VPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRK 241
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+M G++ + TY +MI+ CK AR+L M + + P +ID
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLL 395
+ G +++ +++++ +C PD + +I+ CK ++ +A + E + G P+++
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY+T I C+ L EA + + DM + PN FTY LI CK GN E ++++EE+
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L G N +++ L++GL E G E +V +G
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 460
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 143/294 (48%), Gaps = 9/294 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +TY +++H +A+ + + +L E+K+ IK L+ T++ +GL L
Sbjct: 464 NQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLLLYGTIL--WGLCNESRLEEAK 520
Query: 137 FL--RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
L I++ + + TL++A ++ + + + + V C LI
Sbjct: 521 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA-LIDG 579
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK V+ A+ M +G+ PN+ +T ++ G E AK++F ++LD+G +PD
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
YT L+DG +K G L +A+ + D M + G+E + Y +I + +ARNLLD
Sbjct: 640 KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLD 699
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC---MPDNAISST 365
+M+ + +P + +I GKV++A EL + ++ + D+A+ S
Sbjct: 700 EMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSV 753
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 7/257 (2%)
Query: 245 DILDRGW------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
D+ D W VP + L I+LG L +A + +M V P + ++
Sbjct: 169 DVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLH 228
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K + +R DM S +ID LC+EG +E A L+ ++ P
Sbjct: 229 RLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTP 288
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I K G + E +F++ + P ++TYN LI C+ + +A
Sbjct: 289 DIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFL 348
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+M G++PNV TY+ I FCK G +E I+ +M PN+ +++ LI+ ++
Sbjct: 349 HEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKA 408
Query: 478 GNEGEVGKVVSMATASG 494
GN E K+V +G
Sbjct: 409 GNLAEALKLVEEILQAG 425
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 205/426 (48%), Gaps = 9/426 (2%)
Query: 51 IFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
+ R + + ALQ+F P S TY+ +I A DA SLL E+ +
Sbjct: 1 MVRAGSHNQALQLFRENPCQLPASSV---TYNVLIRGFCNASDLDAAFSLLREMDVEG-M 56
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
+C + +++ GR A++ F +E + Q V S TL+N L + R D
Sbjct: 57 QCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAF 116
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+F+ PN FT N L+ LCK+D ++ A V+ E P++VT+ T++
Sbjct: 117 DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAA 176
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ A F + + G+VP ++ ++ G + RL DA++V +EM D PN
Sbjct: 177 LFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPN 236
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VTY V+I+ CK + EA+ LLD M+ P ++ G+++ A L +
Sbjct: 237 LVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR 296
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESA 408
R++ + C+PD + +I LCK G++ +A ++F E P+++TY+ LI G C ++
Sbjct: 297 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRAS 356
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ E G++ M E PNV TYN +I G + +E + EM + G P+ ++
Sbjct: 357 RVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413
Query: 469 LLIEGL 474
L L
Sbjct: 414 GLKRAL 419
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N+LI+ C D++ A +L EM GM N T + IL G G + A F
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86
Query: 247 LDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGK 304
L+ PD +YT L++G KLGR+ A + +M G PN TY +++ CK
Sbjct: 87 LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ AR ++ + +R + P ++ L + G+V++A + ++ + +P +
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
II LC+ ++ +A ++F+E +R P+L+TY+ +I G+C+S +L EA +L D MV +
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266
Query: 424 GVEPN-----------------------------------VFTYNMLIQGFCKIGNAKEG 448
G P+ V TY ++I CK+G +
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
I E++ C PN ++S LI G + E GKV+
Sbjct: 327 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM 365
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 144/283 (50%), Gaps = 17/283 (6%)
Query: 47 LVSMIFRQQNLDLALQIFH---YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
L++ + + +D A +F AG PN TY++++ L + DA +++TE
Sbjct: 102 LINGLCKLGRVDAAFDLFRKMVAAGGCRPNAF----TYNALVDGLCKQDRLDAARAVITE 157
Query: 104 LKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
++ P++ L + + GR + A+ TF ++ + ++ S N ++ L
Sbjct: 158 ARKRDFAPDVVTYNTLMAALFQ----LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLC 213
Query: 161 QNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
+ +R D + + + F PN+ T +++I LCK D ++ A ++LD M S G P+
Sbjct: 214 RARRLADALEVFNEMIDRDFH--PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 271
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
LV +T ++ G+ G +++A + ++ +G +PD TYTV++D K+GR+ DA ++
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 331
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
E+ N PN VTY +I +C+ + E ++ +M R V
Sbjct: 332 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRPNV 374
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+ + G +A +LF E S +TYN LI G C +++L A L +M +G++ N
Sbjct: 1 MVRAGSHNQALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCND 60
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
T ++++QG C+ G + + + L+ P+ S++ LI GL + G +
Sbjct: 61 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120
Query: 489 MATASGSVESDSWNF 503
A+G +++ +
Sbjct: 121 KMVAAGGCRPNAFTY 135
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 254/561 (45%), Gaps = 100/561 (17%)
Query: 26 LSTITVTPPIKPWPQR----LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTY 81
L+ I PI+P + L P + +I N L + F +A KF ++ ++
Sbjct: 37 LTIIDSVNPIEPALESKVPFLSPSIVTYIIKNPPNSLLGFRFFIWASKFRR--LRSWVSH 94
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENL----FITVIRNYGLAGRPELAVKTF 137
+ II L + F+ +L E+K +CG ++ F +I+ Y E AV++F
Sbjct: 95 NMIIDMLIKDNGFELYWQVLKEIK-----RCGFSISADAFTVLIQAYAKMDMIEKAVESF 149
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ F+ + V + NT+L+ +V+ K L+ L N K +PN+ T +ILI +CK
Sbjct: 150 EMMKDFDCKPDVFTYNTVLHVMVR-KEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCK 208
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A+++ DEM ++PN +T+T I+ G + A R+F + D G +PD+ T
Sbjct: 209 SGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVT 268
Query: 258 YTVLMDGYIKLGRLTDAVKVMD-----------------------------------EME 282
Y L+ G+ KLGR+ +A+ ++ +M
Sbjct: 269 YNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMT 328
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
++ ++P+ + Y +M++ K K +A LL++M +R VP + +I C+ G ++
Sbjct: 329 EHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLD 388
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLI 401
+A L + + +C + +I +C+ G + +A+++F+E E+ G PS++T+N LI
Sbjct: 389 EAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALI 448
Query: 402 AGMCESAELTEAGRLW----------------------------DDMVEK---------- 423
G C++ + +A L+ MVE+
Sbjct: 449 DGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKA 508
Query: 424 ----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
G PN+ TYN+LI GFCK GN ++ +E+ KG P+ ++ LI G
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568
Query: 474 LYESGNEGEVGKVVSMATASG 494
L + E + V+ +G
Sbjct: 569 LLSANREEDAFTVLDQILKNG 589
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 186/369 (50%), Gaps = 4/369 (1%)
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNI 190
L + F+ KF RS S N +++ L+++ ++L + K R F + + FT +
Sbjct: 74 LGFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFT--V 131
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI+A K D +E A+ + M P++ T+ T+L V + + A ++ +L
Sbjct: 132 LIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN 191
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+P+ T+++L+DG K G+ +A+++ DEM + PN++TY ++I C+ +K+ A
Sbjct: 192 CLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAY 251
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L M +P S ++ C+ G+V++A L K + + D S +I L
Sbjct: 252 RLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGL 311
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+ + +A+ + + +I P ++ Y ++ G+ ++ + +A RL ++M E+G+ P+
Sbjct: 312 FRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDT 371
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
YN LI+G+C +G E + E+ CF + ++++LI G+ SG G+ ++ +
Sbjct: 372 HCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNE 431
Query: 490 ATASGSVES 498
G S
Sbjct: 432 MEKHGCYPS 440
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 217/484 (44%), Gaps = 38/484 (7%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
++ ++ R++ + LAL I++ K N N T+ +I + ++ + E+ Q
Sbjct: 167 VLHVMVRKEVVLLALGIYNRMLKL--NCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQ 224
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
I + + +I A + ++A + F+ ++ + N LL+ + R D
Sbjct: 225 R-RILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVD 283
Query: 167 -LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+ L+ + ++ + ++C LI L + E A +M + P+++ +T
Sbjct: 284 EALGLLKYFEKDRYVLDKQGYSC--LIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTI 341
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G G ++A R+ ++ +RG VPD Y L+ GY LG L +A + E+ N
Sbjct: 342 MMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKND 401
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ TY ++I C+ G+A+ + ++M + PS +ID C+ G +E A
Sbjct: 402 CFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQ 461
Query: 346 ELWKRL---------LR----KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
L+ ++ LR N + D A T++ LC G I +A + + + G
Sbjct: 462 LLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFA 521
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++TYN LI G C++ + A +L+ ++ KG+ P+ TY LI G ++ +
Sbjct: 522 PNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTV 581
Query: 452 LEEMLDKGCFP---------------NKTS--FSLLIEGLYE-SGNEGEVGKVVSMATAS 493
L+++L GC P NK + FSL ++ L G + EV K V
Sbjct: 582 LDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEK 641
Query: 494 GSVE 497
G VE
Sbjct: 642 GEVE 645
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 179/440 (40%), Gaps = 45/440 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ +FR + + A Q+++ H N + Y ++ L++A F LL E+ +
Sbjct: 307 LIDGLFRARRFEDA-QVWYRKMTEH-NIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTE 364
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P+ C + +I+ Y G + A L I K + S + L+ + ++
Sbjct: 365 RGLVPDTHC----YNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSG 420
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE--------------------- 202
+F N K P+V T N LI CK ++E
Sbjct: 421 LVGDAQQIF-NEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRL 479
Query: 203 --GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
GA RVLD MV L IL Y + + D G+ P+ TY +
Sbjct: 480 SQGANRVLDTASLQTMVEQLCDSGLILKAY----------NILMQLTDSGFAPNIITYNI 529
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ K G + A K+ E++ G+ P+ VTYG +I + +A +LD +L+
Sbjct: 530 LIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNG 589
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + + + C K+ A LW + LR D+ + ++ ++G++ EA
Sbjct: 590 CTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENF-EKGEVEEAV 648
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ E + + + L Y + G+C++ L EA +++ + E V + LI
Sbjct: 649 RGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRL 708
Query: 440 CKIGNAKEGIRILEEMLDKG 459
K+GN I +DKG
Sbjct: 709 LKVGNLDLAAEIFLYTIDKG 728
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 244/463 (52%), Gaps = 15/463 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ L ++L ++ +++ AL +F A + P ++H+ + I+ +L+ + V
Sbjct: 5 PKPLSARQLFKLLKAEKSPKSALALFDSASR-QPGYTHSPHIFLLILRRLSDPKLVVHV- 62
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLN 157
+ + EL + + KC E++ +TV++ Y + P A+ F ++E+ F + +RS N LLN
Sbjct: 63 TRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLN 122
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
A ++ + F ++PN+ T NILIK KK A +LD M S +
Sbjct: 123 AFIEANLLEKAE-SFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLK 181
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ ++ T++ G V GD+ +A VF ++ +RG VPD Y +++DG+ K G ++
Sbjct: 182 PDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEI 241
Query: 278 MDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK-----YVPSSALCCKV 331
+ + + + V PN VTY VMI CK + E+ + + M + + + SS +C
Sbjct: 242 WERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICG-- 299
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
LC+ G V+ A E++K +++++ + D + +++ C+ GKI E+ +L+ + +
Sbjct: 300 ---LCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC 356
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
++++YN I G+ E+ ++ EA +W+ + +G + TY +LI G CK G+ + ++I
Sbjct: 357 HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKI 416
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+E D G + ++S +++GL + G E +V G
Sbjct: 417 LKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYG 459
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 211/444 (47%), Gaps = 51/444 (11%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAV 134
N TY+ +I+ L + FD + +K+N +C +LF GL G + AV
Sbjct: 254 NVVTYNVMINGLCKMGRFDESLEMWERMKKN---ECEMDLFTYSSLICGLCDVGNVDGAV 310
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + K +V V + N LLN + + ++L +M K + H NV + NI
Sbjct: 311 EVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH------NVVSYNI 364
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
I+ L + VE AI V + + G + T+ ++ G G + A ++ + D G
Sbjct: 365 FIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGG 424
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKV---MD---------------------------- 279
DA Y+ ++DG K GR+ +A+ + MD
Sbjct: 425 DKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAI 484
Query: 280 ----EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
EME G P V+Y +I CK ++ +A + + +ML++ + P ++D L
Sbjct: 485 CFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGL 544
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSL 394
C+ K++ A LW+++L K PD + + ++H LC GKI +A L+ ++ + +P+L
Sbjct: 545 CQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNL 604
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+T+NTL+ G+ ++ E A +W M + G +P++ +YN+ ++G C G +GI + ++
Sbjct: 605 VTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDD 664
Query: 455 MLDKGCFPNKTSFSLLIEGLYESG 478
L G P ++ +L+ + + G
Sbjct: 665 ALKNGILPTSITWYILVRAVLKLG 688
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 196/418 (46%), Gaps = 41/418 (9%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V +V + N ++N L + R+D M++ + K + ++FT + LI LC +V+GA
Sbjct: 251 VYPNVVTYNVMINGLCKMGRFDESLEMWERMK-KNECEMDLFTYSSLICGLCDVGNVDGA 309
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGY-----------VW------------------RGD 235
+ V EM +V ++VT+ +L G+ +W RG
Sbjct: 310 VEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGL 369
Query: 236 IENAK-----RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
EN K V+ + RG D+TTY VL+ G K G L A+K++ E +D G + +
Sbjct: 370 FENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDA 429
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
Y +++ K + EA ++ M + S +C +I+ K+E+A ++
Sbjct: 430 FAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFRE 489
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAE 409
+ K C P +T+I+ LCK + +A E E+ P ++TY+ L+ G+C+ +
Sbjct: 490 METKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKK 549
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A LW ++ KG+EP+V +N+L+ G C G ++ + + M C PN + +
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNT 609
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIVS--DLDSGAGALDELL 523
L++GLY++ E E+ V+ + D S+N L + S + G D+ L
Sbjct: 610 LMDGLYKA-RECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDAL 666
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 231/465 (49%), Gaps = 41/465 (8%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q L ++ QIF +F ++ T++ +I A +R F + +L +K+ +
Sbjct: 42 QNELSISPQIFKSRPQFG-SYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRV-LT 99
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDL----- 167
E +FI + + G A P AV F R+ + +++V+S N++LN ++Q +
Sbjct: 100 ETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY 159
Query: 168 VHLMFKNSR--------------------------HKFKVVP------NVFTCNILIKAL 195
+H+ NS+ F+ +P +VFT + L+ L
Sbjct: 160 LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGL 219
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK+ V+ A+ +LDEM + G +PN VT ++ GD+ A ++ ++ +G VP+
Sbjct: 220 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 279
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L+ G G+L A+ ++++M + PN+VTYG +I K +++ + ++L
Sbjct: 280 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 339
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M +R + + +I L +EGK E+A LWK + K C P+ + I LC++ K
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EA+ + E +G +P+ TY++L+ G + + +A +W +M+ + + NV ++
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L+ G C+ G +E + + ML +G P+ ++S +I+GL + G+
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 504
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 220/492 (44%), Gaps = 74/492 (15%)
Query: 47 LVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
++++I ++ + A + + H G F N TY+ II L + D E+
Sbjct: 142 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREM- 200
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFL--RIEKFNVQRSVRSLNTLLNALVQN- 162
P C ++F GL + FL ++ + + N L++AL +N
Sbjct: 201 --PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 258
Query: 163 ---KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
+ LV MF VPN T N LI LC K ++ A+ +L++M S VPN
Sbjct: 259 DLSRAAKLVDNMFLKG-----CVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPN 313
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
VT+ TI+ G V + E+ + + +RG + Y+ L+ G K G+ +AV++
Sbjct: 314 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK 373
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS-------------- 325
EM + G +PN V YG I+ C+ +K EA ++L +ML + ++P++
Sbjct: 374 EMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 433
Query: 326 --------------------ALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+CC V+ + LCE G++ +A +W +L + PD S
Sbjct: 434 DSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYS 493
Query: 365 TIIHWLCKEGKIWEAKKLFDEF---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++I LC G + + KLF E E S P ++TYN L +C LT A L + M+
Sbjct: 494 SMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSML 553
Query: 422 EKGVEPNVFTYNMLIQGFC-KIGNAKEG--------------------IRILEEMLDKGC 460
++G +P+ T N+ ++ +I ++G +RI+EEML +
Sbjct: 554 DEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFL 613
Query: 461 FPNKTSFSLLIE 472
P +++S +I+
Sbjct: 614 PPEPSTWSRVIQ 625
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 189/431 (43%), Gaps = 26/431 (6%)
Query: 72 PNFS-HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
P FS H + +HK AR F SL P+ + ++ + ++ G
Sbjct: 2 PKFSIHQLNPLTISLHKPARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKSRPQFGSY 61
Query: 131 ELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+L TF R IE + R ++ +L+ + + R L +F
Sbjct: 62 KLGDATFYRLIENYATSREFHFIHQVLDRMKREGRV-LTETIF----------------- 103
Query: 190 ILIKALCKKDDVEG-AIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
ILI C K + G A+ M + + + + ++L + GD A + + +
Sbjct: 104 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 163
Query: 248 ---DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+G+ P+ TY +++ KLG++ AV EM P+ TY ++ CK +
Sbjct: 164 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 223
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA LLD+M +P+ +ID L + G + A +L + K C+P+ +
Sbjct: 224 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 283
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T+IH LC +GK+ +A L ++ +P+ +TY T+I G+ + + + M E+
Sbjct: 284 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER 343
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G + N + Y+ LI G K G ++ +R+ +EM +KGC PN + I+GL E
Sbjct: 344 GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 403
Query: 484 GKVVSMATASG 494
++ + G
Sbjct: 404 EDILQEMLSKG 414
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 42/281 (14%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
DAT Y L++ Y +V+D M+ G E + ++ +A K GEA N
Sbjct: 65 DATFYR-LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFF 123
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M DL C ++ N++ + II +E
Sbjct: 124 HRMAN--------------DLHC----------------KQTVKSFNSVLNVII----QE 149
Query: 374 GKIWEAKK----LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
G A K +F +G P+LLTYN +I +C+ ++ A + +M K P+V
Sbjct: 150 GDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDV 209
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
FTY+ L+ G CK E + +L+EM +GC PN +F++LI+ L ++G+ K+V
Sbjct: 210 FTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDN 269
Query: 490 ATASGSVESD-SWNFLLTRIV--SDLDSGAGALDELLVKNC 527
G V ++ ++N L+ + LD L++++ C
Sbjct: 270 MFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKC 310
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 106/256 (41%), Gaps = 25/256 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y + I L R D E +L E+ + + ++++ + G + A+
Sbjct: 383 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP-NAFTYSSLMKGFFKKGDSQKAILV 441
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + +++ +V + LLN L ++ R ++ + + + P+V + +IK LC
Sbjct: 442 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGE-GLKPDVVAYSSMIKGLC 500
Query: 197 KKDDVEGAIRVLDEMPSM--GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
V+ +++ EM P++VT+ + + ++ A + +LD G PD
Sbjct: 501 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 560
Query: 255 ATTYTVLM-----------DGYIKLGRLT----------DAVKVMDEMEDNGVEPNEVTY 293
+ T + + DG + L L A+++++EM + P T+
Sbjct: 561 SLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTW 620
Query: 294 GVMIEAFCKGKKSGEA 309
+I+ CK K+ E
Sbjct: 621 SRVIQRTCKPKRIRET 636
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 225/444 (50%), Gaps = 20/444 (4%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE-------- 109
D AL +F A SH ++H LARAR F +LL+ L + E
Sbjct: 85 DAALHLFRLAPSRPSLVSHA-----QLLHILARARRFHDARALLSSLPPHAEPLFPHLAE 139
Query: 110 ----IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
F ++R + AG+ A+ F + K + S+RS N LLN LVQ+
Sbjct: 140 VYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDP 199
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+ +++ R V+P+ FT I+ KA C+ V A+ ++EM MG+ NLV +
Sbjct: 200 GMAAMVYGQMRIA-GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA 258
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ Y G E+A+R+ + +G P+ TYT+L+ GY K GR+ +A +V+ EM++ G
Sbjct: 259 VMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
Query: 286 -VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+ +EV YG+MI +C+ + +A + ++M + + +I+ LC+ G++E+
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
++ + + PD +T+I C+EG + +A ++ R G + LTYNTL+ G
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + +A RLW M+++GV PN + + L+ G K G ++ + + +E L +G N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498
Query: 464 KTSFSLLIEGLYESGNEGEVGKVV 487
+F+ +I GL + G E +++
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELL 522
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 214/451 (47%), Gaps = 18/451 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ +F+ + AL + + + N T++++I+ L + E
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNL--WKETLARGLAKNVITFNTVINGLCKIGRMAEAE 519
Query: 99 SLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
LL +K E++C + + T+ Y G+ A ++E SV N+ +
Sbjct: 520 ELLDRMK---ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
K++ V+ + + + PN+ T LI CK+ ++ A + EM + GM
Sbjct: 577 TGHFIAKQWHKVNDIHSEMSAR-GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+ + ++ + G ++ A V +++ +P + T+ +D
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID---------KISH 686
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V+D + D V + V+I CK + +A++L + + ++++P + +I
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLL 395
G +++A L +L P+ +++I+ LCK GK+ A LF++ + +G P+ +
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TYNTLI C+ + TEA +L MVE+G++P V TY++LI G C G +E I++L++M
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
++ PN ++ LI G +SGN E+ K+
Sbjct: 867 IENNVDPNYITYCTLIHGYIKSGNMEEISKL 897
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 208/476 (43%), Gaps = 72/476 (15%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y+++I+ L + + V+ +L E+ ++ ++ + + T+I Y G A +
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGMRPDKYSYNTLIDGYCREGSMRKAFEM 416
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + + + + NTLL D L LM K V PN +C+ L+
Sbjct: 417 CRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG-----VAPNEISCSTLL 471
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
L K E A+ + E + G+ N++T T++ G G + A+ + + +
Sbjct: 472 DGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCP 531
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMED----------------------------- 283
PD+ TY L DGY KLG+L A +M++ME
Sbjct: 532 PDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDI 591
Query: 284 ------NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
G+ PN VTYG +I +CK EA NL +M+ P+ +C ++ +
Sbjct: 592 HSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYK 651
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISS--------------------------TIIHWLC 371
EGKV++A + ++L+ + +P +IS+ II LC
Sbjct: 652 EGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLC 711
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G+I +AK LF+ + +P TY++LI G S + EA L D M+ G+ PN+
Sbjct: 712 KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII 771
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
TYN LI G CK G + + ++ KG PN +++ LI+ + G E K+
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKL 827
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 199/439 (45%), Gaps = 37/439 (8%)
Query: 80 TYHSIIHKLARARAFD-AVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVK 135
TY++++ A D A+ LK+ EI C T++ AG+ E A+
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCS-----TLLDGLFKAGKTEQALN 485
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++V + NT++N L + R + + + + P+ T L
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK-ELRCPPDSLTYRTLFDGY 544
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK + A ++++M +G P++ + + G+ + ++ RG P+
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L+ G+ K G L +A + EM +NG+ PN ++ F K K EA +L
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664
Query: 316 MLQRKYVPSSALCCKVIDL--------------------------LCEEGKVEDACELWK 349
++ +P ++ ID LC+ G++ DA L++
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESA 408
L K +PDN S++IH G I EA L D G P+++TYN+LI G+C+S
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+L+ A L++ + KG+ PN TYN LI +CK G E ++ ++M+++G P ++S
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYS 844
Query: 469 LLIEGLYESGNEGEVGKVV 487
+LI GL G E K++
Sbjct: 845 ILIYGLCTQGYMEEAIKLL 863
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 169/357 (47%), Gaps = 27/357 (7%)
Query: 177 HKFKVVPN---VFTCNILIKALCKKDDVEGAIRVLDEMPSMG--MVPNL----------- 220
H F++ P+ + + L+ L + A +L +P + P+L
Sbjct: 89 HLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSA 148
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
V+ +L + G + +A VF + G P + L++ ++ G A V +
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM----LQRKYVPSSALCCKVIDLLC 336
M GV P+E T +M +A+C+ + +A +++M L+ V A V+D C
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHA----VMDCYC 264
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP-SL 394
G EDA + + L RK P+ + ++ CK+G++ EA+++ E E G I
Sbjct: 265 GMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE 324
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ Y +I G C+ + +A R+ ++M + G+ N+F YN +I G CK+G +E ++L+E
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVS 510
M D G P+K S++ LI+G G+ + ++ M +G + + ++N LL S
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 1/206 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N++I LCK + A + + + + +P+ T+++++ G G I+ A + +L
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P+ TY L+ G K G+L+ AV + ++++ G+ PN +TY +I+ +CK K+ E
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L M++ P+ +I LC +G +E+A +L +++ N P+ T+IH
Sbjct: 824 AFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIH 883
Query: 369 WLCKEGKIWEAKKLFDEFE-RGSIPS 393
K G + E KL+DE RG +P+
Sbjct: 884 GYIKSGNMEEISKLYDEMHIRGLLPT 909
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N ++ L ++ R +F++ R+K + +P+ FT + LI ++ A + D M
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNK-RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
S G+ PN++T+ +++ G G + A +F + +G P+ TY L+D Y K G+ T
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A K+ +M + G++P +TY ++I C EA LLD M++ P+ C +I
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ G +E+ +L+ + + +P N I +
Sbjct: 883 HGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 205/396 (51%), Gaps = 2/396 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T++R + G+ A+ F ++ Q +V + TL+N L ++++ +F
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI 188
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + P++FT N LI ALC + + +L+EM ++PN+V+ ++ G +
Sbjct: 189 AK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKV 247
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A V ++ G PD TY LMDG+ + +AVKV D M NG N V+Y +
Sbjct: 248 TEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTL 307
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I +CK ++ +A L ++M +++ +P++ +I LC G+++DA L+ ++
Sbjct: 308 INGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ 367
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
+P+ S ++ +LCK ++ EA L E ++ P + YN I GMC + +L A
Sbjct: 368 IPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARD 427
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ ++ +G++P+V+T+N++I+G CK G E ++ EM + GC N +++ + +GL
Sbjct: 428 LFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLL 487
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
++ +++ A G S LL +++SD
Sbjct: 488 QNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 182/343 (53%), Gaps = 2/343 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + + LL ++ + K Y V L F + P+V+T I+I
Sbjct: 40 ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTV-LSLSKKMDSFGIPPDVYTLTIVI 98
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + V+ A+ VL ++ +G P+ T TT++ G G I A VF ++ G+
Sbjct: 99 NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQ 158
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY LM+G K +LT+A+ + EM G+ P+ TY +I A C + L
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL 218
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L++M++ K +P+ V+D LC+EGKV +A ++ +++ PD + ++ C
Sbjct: 219 LNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCL 278
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++ EA K+FD R G + ++++YNTLI G C+ + +A L+++M + + PN T
Sbjct: 279 RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
Y+ LI G C +G ++ I + EM+ G PN ++S+L++ L
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYL 381
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 6/267 (2%)
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+ L DA+ M P + ++ + K K +L M P
Sbjct: 32 LHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDV 91
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
VI+ C +V+ A + ++L+ PD A +T++ LC GKI EA +FD+
Sbjct: 92 YTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDK 151
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
G P+++TY TL+ G+C+ +LTEA L+ +M+ KG+ P++FTYN LI C +
Sbjct: 152 MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE 211
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
K +L EM+ PN S +++++ L + G E VV M G VE D +
Sbjct: 212 WKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMI-QGGVEPDVVTYA 270
Query: 505 LTR----IVSDLDSGAGALDELLVKNC 527
+ S++D D ++ C
Sbjct: 271 ALMDGHCLRSEMDEAVKVFDMMVRNGC 297
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P + L+ K+ + + + +M+ G+ P+ T +
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + A ++L +L+ + P +A ++ LC GK+ +A +++ +++ +
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
P+ T+++ LCK+ ++ EA LF E +G P + TYN+LI +C E
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L ++MV+ + PNV + N+++ CK G E +++ M+ G P+ +++ L++G
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276
Query: 475 YESGNEGEVGKVVSMATASGSV 496
E KV M +G V
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCV 298
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 1/272 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++ + L + AVK F + + +V S NTL+N + +R D +F+
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ +++PN T + LI LC ++ AI + +EM + G +PNLVT++ +L +
Sbjct: 329 RQ-ELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRL 387
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A + I PD Y + +DG + G L A + + G++P+ T+ +M
Sbjct: 388 AEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIM 447
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I CK EA L +M + + + + L + K A +L + +L +
Sbjct: 448 IRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGF 507
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
D + ++ ++ L +G K++ EF R
Sbjct: 508 SADVSTTALLVKMLSDDGLDQSVKQILCEFMR 539
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 231/465 (49%), Gaps = 41/465 (8%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q L ++ QIF +F ++ T++ +I A +R F + +L +K+ +
Sbjct: 66 QNELSISPQIFKSRPQFG-SYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRV-LT 123
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDL----- 167
E +FI + + G A P AV F R+ + +++V+S N++LN ++Q +
Sbjct: 124 ETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY 183
Query: 168 VHLMFKNSR--------------------------HKFKVVP------NVFTCNILIKAL 195
+H+ NS+ F+ +P +VFT + L+ L
Sbjct: 184 LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGL 243
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK+ V+ A+ +LDEM + G +PN VT ++ GD+ A ++ ++ +G VP+
Sbjct: 244 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 303
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L+ G G+L A+ ++++M + PN+VTYG +I K +++ + ++L
Sbjct: 304 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 363
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M +R + + +I L +EGK E+A LWK + K C P+ + I LC++ K
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EA+ + E +G +P+ TY++L+ G + + +A +W +M+ + + NV ++
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L+ G C+ G +E + + ML +G P+ ++S +I+GL + G+
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 528
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 220/492 (44%), Gaps = 74/492 (15%)
Query: 47 LVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
++++I ++ + A + + H G F N TY+ II L + D E+
Sbjct: 166 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREM- 224
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFL--RIEKFNVQRSVRSLNTLLNALVQN- 162
P C ++F GL + FL ++ + + N L++AL +N
Sbjct: 225 --PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 282
Query: 163 ---KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
+ LV MF VPN T N LI LC K ++ A+ +L++M S VPN
Sbjct: 283 DLSRAAKLVDNMFLKG-----CVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPN 337
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
VT+ TI+ G V + E+ + + +RG + Y+ L+ G K G+ +AV++
Sbjct: 338 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK 397
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS-------------- 325
EM + G +PN V YG I+ C+ +K EA ++L +ML + ++P++
Sbjct: 398 EMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 457
Query: 326 --------------------ALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+CC V+ + LCE G++ +A +W +L + PD S
Sbjct: 458 DSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYS 517
Query: 365 TIIHWLCKEGKIWEAKKLFDEF---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++I LC G + + KLF E E S P ++TYN L +C LT A L + M+
Sbjct: 518 SMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSML 577
Query: 422 EKGVEPNVFTYNMLIQGFC-KIGNAKEG--------------------IRILEEMLDKGC 460
++G +P+ T N+ ++ +I ++G +RI+EEML +
Sbjct: 578 DEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFL 637
Query: 461 FPNKTSFSLLIE 472
P +++S +I+
Sbjct: 638 PPEPSTWSRVIQ 649
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 189/431 (43%), Gaps = 26/431 (6%)
Query: 72 PNFS-HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
P FS H + +HK AR F SL P+ + ++ + ++ G
Sbjct: 26 PKFSIHQLNPLTISLHKPARLSPFFYFSSLPLSSNSTPDAQNELSISPQIFKSRPQFGSY 85
Query: 131 ELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+L TF R IE + R ++ +L+ + + R L +F
Sbjct: 86 KLGDATFYRLIENYATSREFHFIHQVLDRMKREGRV-LTETIF----------------- 127
Query: 190 ILIKALCKKDDVEG-AIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
ILI C K + G A+ M + + + + ++L + GD A + + +
Sbjct: 128 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 187
Query: 248 ---DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+G+ P+ TY +++ KLG++ AV EM P+ TY ++ CK +
Sbjct: 188 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 247
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA LLD+M +P+ +ID L + G + A +L + K C+P+ +
Sbjct: 248 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 307
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T+IH LC +GK+ +A L ++ +P+ +TY T+I G+ + + + M E+
Sbjct: 308 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER 367
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G + N + Y+ LI G K G ++ +R+ +EM +KGC PN + I+GL E
Sbjct: 368 GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 427
Query: 484 GKVVSMATASG 494
++ + G
Sbjct: 428 EDILQEMLSKG 438
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 42/281 (14%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
DAT Y L++ Y +V+D M+ G E + ++ +A K GEA N
Sbjct: 89 DATFYR-LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFF 147
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M DL C ++ N++ + II +E
Sbjct: 148 HRMAN--------------DLHC----------------KQTVKSFNSVLNVII----QE 173
Query: 374 GKIWEAKK----LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
G A K +F +G P+LLTYN +I +C+ ++ A + +M K P+V
Sbjct: 174 GDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDV 233
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
FTY+ L+ G CK E + +L+EM +GC PN +F++LI+ L ++G+ K+V
Sbjct: 234 FTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDN 293
Query: 490 ATASGSVESD-SWNFLLTRIV--SDLDSGAGALDELLVKNC 527
G V ++ ++N L+ + LD L++++ C
Sbjct: 294 MFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKC 334
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 106/256 (41%), Gaps = 25/256 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y + I L R D E +L E+ + + ++++ + G + A+
Sbjct: 407 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP-NAFTYSSLMKGFFKKGDSQKAILV 465
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + +++ +V + LLN L ++ R ++ + + + P+V + +IK LC
Sbjct: 466 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGE-GLKPDVVAYSSMIKGLC 524
Query: 197 KKDDVEGAIRVLDEMPSM--GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
V+ +++ EM P++VT+ + + ++ A + +LD G PD
Sbjct: 525 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 584
Query: 255 ATTYTVLM-----------DGYIKLGRLT----------DAVKVMDEMEDNGVEPNEVTY 293
+ T + + DG + L L A+++++EM + P T+
Sbjct: 585 SLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTW 644
Query: 294 GVMIEAFCKGKKSGEA 309
+I+ CK K+ E
Sbjct: 645 SRVIQRTCKPKRIRET 660
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 181/347 (52%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F R+ + S+ + LL ++ + K Y V ++K F + N +T NILI
Sbjct: 38 ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQ-MDSFGIPHNTYTLNILI 96
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + + A VL ++ +G P+ T TT++ G G I A ++F + G+
Sbjct: 97 NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ 156
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L++G K+G + A++ + ME P V Y +I++ CK ++ EA +L
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSL 216
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
DML + P++ +I LC G ++A L+ ++ + MPD +T++ LCK
Sbjct: 217 FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCK 276
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + +A + D + + P ++TYN+L+ G C +E+ + ++D MV KG P+V +
Sbjct: 277 EGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVIS 336
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y LI G+CKI + + + EEM +G P+ +++ LI GL G
Sbjct: 337 YTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 383
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 167/309 (54%), Gaps = 1/309 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K++P+ T N L+ ALCK+ V A V+D M + P++VT+ +++ G+ R ++
Sbjct: 259 KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKT 318
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
VF ++ +G VP +YT L++GY K+ + A+ + +EM G+ P+ VTY +I
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C + +A L +M+ +P + D LC+ ++ +A L K + N PD
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPD 438
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
I S ++ +C+ G++ A+ LF + +G P + TY +I G+C+ L EA +L+
Sbjct: 439 IHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFG 498
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M E G PN TYN++ +GF + I++ +EML +G + ++ +LL+E L + G
Sbjct: 499 EMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558
Query: 479 NEGEVGKVV 487
+ V +++
Sbjct: 559 LDQSVKQIL 567
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 230/517 (44%), Gaps = 48/517 (9%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR-- 92
++P P + +L++ I R ++ L ++ F HN T + +I+
Sbjct: 48 MRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSF--GIPHNTYTLNILINSFCHLNRL 105
Query: 93 --AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
AF + +L +L P F T+IR + G+ A++ F ++ Q V
Sbjct: 106 GFAFSVLGDIL-KLGYQPSTAT----FTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVL 160
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ TL+N L + + F S + P V + +I +LCK + A+ + +
Sbjct: 161 TYGTLINGLCKVGNTS-TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSD 219
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G+ PN T+++++ G G + A R+F ++ R +PD T+ L+D K G
Sbjct: 220 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGM 279
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ A V+D M + ++P+ VTY +++ C + G+ N+ D M+++ VPS
Sbjct: 280 VVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTT 339
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
+I+ C+ ++ A L++ + ++ +PD +T+IH LC G++ +A LF E G
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399
Query: 390 SIPSLLTYNTL-----------------------------------IAGMCESAELTEAG 414
IP L+TY L + GMC + EL A
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ + KG+ P+V TY ++I G C+ G E ++ EM + GC PN +++L+ G
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGF 519
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+ ++ + G S LL ++SD
Sbjct: 520 LRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSD 556
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 156/297 (52%), Gaps = 6/297 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I++A +F +L P ++ L+ ++ + + + +M+ G+ N T +
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + G A ++L D+L+ Y PS+A +I LC EGK+ +A +L+ ++ +
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
PD T+I+ LCK G A + E R P+++ Y+T+I +C+ +LTEA
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ DM+ KG+ PN FTY+ LI G C +G+ KE IR+ M+ + P++ +F+ L++ L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Query: 475 YESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGAGALDELLVKNC 527
+ G + VV + S ++ D ++N L+ + S++ D ++ K C
Sbjct: 275 CKEGMVVKAHYVVDVMIQS-DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y ++I+ + + D L E+ Q I + T+I GR A+ F
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIP-DTVTYNTLIHGLCHVGRLRDAIALFHE 394
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + L + L +N R ++ K + P++ +I++ +C+
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT-NLDPDIHIYSIVMDGMCRAG 453
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++E A + ++ S G+ P++ T+T ++ G +G + A ++FG++ + G P+A TY
Sbjct: 454 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYN 513
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++ G+++ A+++ EM G + T +++E + +L + +Q
Sbjct: 514 LITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 183/325 (56%), Gaps = 2/325 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN +T N +I LCK V A RVL EM S G+ P+ V +TT++ G+ G++ +A R+
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ R PD TYT ++ G + GR+ +A K+ EM +EP+EVTY +I+ +CK
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K EA +L + MLQ P+ + D LC+ G+V+ A EL + RK +
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++++ LCK G I +A KL + E G P +TY TL+ C+S E+ A L M+
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++ ++P V T+N+L+ GFC G ++G ++L+ ML+KG PN T+++ LI+ N
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520
Query: 482 EVGKVVSMATASGSV-ESDSWNFLL 505
++ A G V + +++N L+
Sbjct: 521 ATTEIYRGMCAKGVVPDGNTYNILI 545
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 3/400 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I L + E +L E+ I ++ T+I + G A + F
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEG-IAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 283
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++K + + ++ L Q R +F K ++ P+ T LI CK+
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK-RLEPDEVTYTALIDGYCKEG 342
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + ++M MG+ PN+VT+T + G G+++ A + ++ +G + TY
Sbjct: 343 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 402
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G K G + AVK+M +ME G P+ VTY +++A+CK ++ A LL ML R
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P+ +++ C G +ED +L K +L K MP+ +++I C +
Sbjct: 463 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 522
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+++ +G +P TYN LI G C++ + EA L DMV KG V +YN LI+G
Sbjct: 523 TEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 582
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
F K E + E+M +G ++ +++ + Y+ G
Sbjct: 583 FYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEG 622
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 2/289 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++ L + D LL E+ + ++ + +++ AG + AVK
Sbjct: 362 NIVTYTALADGLCKCGEVDTANELLHEMCRKG-LELNIYTYNSLVNGLCKAGNIDQAVKL 420
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+E + TL++A +++ H + + + ++ P V T N+L+ C
Sbjct: 421 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTVVTFNVLMNGFC 479
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+E ++L M G++PN T+ +++ Y R ++ ++ + +G VPD
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 539
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+ G+ K + +A + +M G +Y +I+ F K KK EAR L + M
Sbjct: 540 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ V + D+ +EGK+E EL + K + D +T
Sbjct: 600 RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
KL +E + +G P+ TYN +I +C++ ++ EA R+ +M+ +G+ P+ Y LI GF
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
CK+GN R+ +EM + P+ +++ +I GL ++G E K+
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 315
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 219/446 (49%), Gaps = 11/446 (2%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIK 111
Q +DLA +F K + T++++I+ L + F + + + P +
Sbjct: 144 QRVDLAFSVFSKMIKL--GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVY 201
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
+ T+I G A F ++E+ Q +V + N L+++L ++K + +
Sbjct: 202 T----YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F + K ++ P++FT N LI+ LC + A +L+EM S+ ++PN+ T ++
Sbjct: 258 FSYMKAK-RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAIC 316
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G + A+ VF + + G PD TY+ LM GY + +A K+ D M G +P+
Sbjct: 317 KEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAF 376
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+Y ++I+ +CK K+ EA+ L ++M+ + P + +I LC+ G++ +A +L+K +
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAEL 410
+PD S ++ CKEG + +A +LF + + P + YN LI MC+ L
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A +L+ ++ +G+ PNV Y +I CK G E + M GC P++ S++++
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556
Query: 471 IEGLYESGNEGEVGKVVSMATASGSV 496
I G + +E +++ G V
Sbjct: 557 IRGFLQYKDESRAAQLIGEMRDRGFV 582
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 177/343 (51%), Gaps = 1/343 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL+A+V+ +Y + + P+++T +ILI V+ A V +M +
Sbjct: 100 LLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKL 159
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ P+ VT T++ G G A F D G P TYT +++G K+G T A
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAA 219
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ +ME+ G +PN VTY ++I++ CK K EA ++ M ++ P +I
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
LC + ++A L + N MP+ + ++ +CKEGK+ EA+ +F E G P
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TY++L+ G E+ EA +L+D M+ KG +P+ F+YN+LI+G+CK E ++
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
EM+ +G P+ +++ LI GL + G E + ++G++
Sbjct: 400 EMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNL 442
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 182/356 (51%), Gaps = 2/356 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++E + + +L+ L++ +R DL +F + K + P+ T N LI LCK
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF-SKMIKLGLQPDAVTFNTLINGLCKV 178
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
A+ D+ + G P + T+TTI+ G G+ A +F + + G P+ TY
Sbjct: 179 GKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTY 238
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L+D K + +A+ + M+ + P+ TY +I+ C ++ EA LL++M
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+P+ ++D +C+EGKV +A ++K + PD S++++ +I E
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+KLFD +G P +YN LI G C++ + EA +L+++M+ +G+ P+ YN LI
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
G C++G +E + + M G P+ ++S+L++G + G G+ ++ + ++
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQST 474
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+ + +D A Q+F+ H + + Y+++IH L + + L + N +
Sbjct: 387 KAKRIDEAKQLFNEM--IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP- 443
Query: 113 GENLFITVIRNYGLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
+LF + G L A + F ++ ++ + N L++A+ +
Sbjct: 444 --DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN------ 495
Query: 171 MFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
K++R F ++PNV +I LCK+ ++ A+ M G P+ ++
Sbjct: 496 -LKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
I+ G++ D A ++ G++ DRG+V +A T T
Sbjct: 555 VIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 215/409 (52%), Gaps = 4/409 (0%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N T+++++ L A + DAV L +L + + E ++ TV+ G E +
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAV-VLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLS 189
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+E+ N + VR+ + +++AL ++ D + + K + PN+FT N LI L
Sbjct: 190 LLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQK-NIPPNIFTYNSLIDGL 248
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK E +L EM ++ + PN+ T + ++ G G +E+A V ++++G PD
Sbjct: 249 CKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDI 308
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY+ +MDGY G++ A +V + + D G++PN +Y ++I +CK K +A L +
Sbjct: 309 ITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGE 368
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ Q+ P + ++ L E G++ DA +++ +LR PD + ST++ K G
Sbjct: 369 ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGL 428
Query: 376 IWEAKKLFDEFERGSIPSLLT-YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EA LF + ER + ++ Y +I G+C++ + EA +++ + G+ P+V TYN+
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+I GFC+ G E IL +M D GC N +++++++G + S E+
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEI 537
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 210/401 (52%), Gaps = 9/401 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y ++++ L++ + SLL ++Q P+++ + + ++ L + A+
Sbjct: 171 YGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL----DAAINLL 226
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ N+ ++ + N+L++ L + +++ V + + + PNV T +ILI LCK
Sbjct: 227 NEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVN-LNINPNVHTFSILIDGLCK 285
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ VE A V+ M G+ P+++T++ I+ GY RG ++ A+RVF + D+G P+ +
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y++L++GY K L A+++ E+ G++P+ VTY ++ + + G+A+ + D+ML
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P L ++ + G VE+A L+ +L R + + + +I+ LCK ++
Sbjct: 406 RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVR 465
Query: 378 EAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA +F++ G IP + TYN +I G C E + M + G N TYN+++
Sbjct: 466 EAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIM 525
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
QGF + E + ++EM +G + T+ +LI L E+
Sbjct: 526 QGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 222/479 (46%), Gaps = 49/479 (10%)
Query: 57 LDLALQIFHYAGKFHP-----NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
LD A+ +FH + P +FS + T ++ H + AV SL E++ I
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKH-------YSAVVSLFREMRI-LGIP 94
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHL 170
+++ V +Y L R + A K + +V + NTLL L +NK D V L
Sbjct: 95 ISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVL 154
Query: 171 MFKNSRHKF----------------------------------KVVPNVFTCNILIKALC 196
K R K P+V T +I+I ALC
Sbjct: 155 FKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALC 214
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +++ AI +L+EM + PN+ T+ +++ G G E K + ++++ P+
Sbjct: 215 KDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVH 274
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+++L+DG K G++ DA +VM M + GVEP+ +TY +++ +C + AR + + +
Sbjct: 275 TFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVL 334
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P+ +I+ C++ + A +L+ + +K PD STI+H L + G+I
Sbjct: 335 RDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRI 394
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+AKK+FDE R G P + ++TL+ G + + EA L+ + + N+ Y ++
Sbjct: 395 GDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVV 454
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
I G CK +E I E++ G P+ +++++I G G EV ++ +G
Sbjct: 455 INGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 179/392 (45%), Gaps = 40/392 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
++ + + NLD A+ + + + N N TY+S+I L + ++ V++LL+E+
Sbjct: 209 VIDALCKDINLDAAINLLNEMKQ--KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM-V 265
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
N I + F +I G+ E A + + + V+ + + + +++ + D
Sbjct: 266 NLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVD 325
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+F R K + PN+F+ +ILI CKK ++ A+++ E+ G+ P+ VT++TI
Sbjct: 326 RARRVFNVLRDK-GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTI 384
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
L G + G I +AK++F ++L G PD ++ L+ GY K G + +A+ + ++E N
Sbjct: 385 LHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRE 444
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+ N Y V+I CK + EA + + + PS L
Sbjct: 445 DTNISFYTVVINGLCKNDRVREAHAIFEKL------PSIGL------------------- 479
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMC 405
+PD + +I C+EG E K + + E P+ +TYN ++ G
Sbjct: 480 ----------IPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFF 529
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
S +++E +M +G + T +LI
Sbjct: 530 RSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 227/449 (50%), Gaps = 14/449 (3%)
Query: 57 LDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCG 113
+D AL I H A F P +Y++++ R+ R E++ E+ Q+ +
Sbjct: 150 IDKALSIVHLSQAHGFMPGVL----SYNAVLDATIRSKRNISFAENVFKEMLQS---QVS 202
Query: 114 ENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
N+F +IR + LAG ++A++ F R+EK +V + NTL++ + ++ D +
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
++ K + PN+ + N++I LC++ ++ VL EM G + VT+ T++ GY
Sbjct: 263 LRSMALK-GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYC 321
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G+ A + ++L G P TYT L+ K G + A + +D+M G+ PNE
Sbjct: 322 KEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNER 381
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +++ F + EA +L +M+ + PS +I+ C GK+ DA + + +
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
K PD ST++ C+ + EA ++ + +G P +TY++LI G CE
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA L+D+M+ G+ P+ FTY LI +C G+ ++ I++ EM++KG P+ ++S+L
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVESD 499
I GL + E +++ SV SD
Sbjct: 562 INGLNKQARTREAKRLLLKLFYEESVPSD 590
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 240/496 (48%), Gaps = 49/496 (9%)
Query: 23 RCSLSTITVTPP-----------IKPWPQRLY-------PKRLVSMIFRQQN-LDLALQI 63
R SLST T +P +K P +L+ P+ +++ + QN +L L+
Sbjct: 9 RRSLSTFTSSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNNQELILKF 68
Query: 64 FHYAGKFHPNFSHNYDTYHS---IIHKLARARAFDAVESLLTELK-QNPEIKCGENLFIT 119
+A H + T +H L R + + ++L ++ + + + +F +
Sbjct: 69 LTWAN------PHQFFTLRCKCITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRS 122
Query: 120 VIRNYGLAGRP----ELAVKTFLRI-------------EKFNVQRSVRSLNTLLNALVQN 162
+ Y L +L VK++ R+ + V S N +L+A +++
Sbjct: 123 LQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRS 182
Query: 163 KR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
KR +FK +V PNVFT NILI+ C +++ A+R D M G +PN+V
Sbjct: 183 KRNISFAENVFKEMLQS-QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVV 241
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ T++ GY I++ + + +G P+ +Y V+++G + GR+ + V+ EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEM 301
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G +EVTY +I+ +CK +A + +ML+ PS +I +C+ G +
Sbjct: 302 NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNM 361
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
A E ++ + P+ +T++ ++G + EA ++ E + G PS++TYN L
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G C + ++ +A + +DM EKG+ P+V +Y+ ++ GFC+ + E +R+ +M+ KG
Sbjct: 422 INGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481
Query: 461 FPNKTSFSLLIEGLYE 476
P+ ++S LI+G E
Sbjct: 482 KPDTITYSSLIQGFCE 497
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 213/444 (47%), Gaps = 28/444 (6%)
Query: 56 NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
NLD+AL+ F K N TY+++I + R D LL + +K E
Sbjct: 220 NLDVALRFFDRMEK--KGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA----LKGLEP 273
Query: 116 LFIT---VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
I+ VI GR + + K + NTL+ + + +M
Sbjct: 274 NLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 173 KNS-RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
RH P+V T LI ++CK ++ A LD+M G+ PN T+TT++ G+
Sbjct: 334 AEMLRHGLS--PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G + A RV +++D G+ P TY L++G+ G++ DA+ V+++M++ G+ P+ V
Sbjct: 392 QKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+Y ++ FC+ EA + M+ + P + +I CE+ + ++AC+L+ +
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEM 511
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
LR PD + +I+ C EG + +A +L +E E+G +P ++TY+ LI G+ + A
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQ---------------GFCKIGNAKEGIRILEEM 455
EA RL + + P+ TY+ LI+ GFC G E ++ E M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 456 LDKGCFPNKTSFSLLIEGLYESGN 479
L+K P+ T+++++I G G+
Sbjct: 632 LEKNHKPDGTAYNVMIHGHCRGGD 655
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 215/428 (50%), Gaps = 18/428 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+ +I+ L R + +LTE+ + E + T+I+ Y G A+
Sbjct: 274 NLISYNVVINGLCREGRMKEISFVLTEMNKRG-YSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + SV + +L++++ + + R + + PN T L+
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR-GLCPNERTYTTLVDGFS 391
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+K + A RVL EM G P++VT+ ++ G+ G + +A V D+ ++G PD
Sbjct: 392 QKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y+ ++ G+ + + +A++V +M G++P+ +TY +I+ FC+ +++ EA +L D+M
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEM 511
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L+ P +I+ C EG ++ A +L ++ K +PD S +I+ L K+ +
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLI---------------AGMCESAELTEAGRLWDDM 420
EAK+L + F S+PS +TY+TLI G C +TEA ++++ M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+EK +P+ YN++I G C+ G+ ++ + +EM+ G + + L++ L++ G
Sbjct: 632 LEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKV 691
Query: 481 GEVGKVVS 488
E+ V++
Sbjct: 692 NELNSVIA 699
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ +F E + + P++ TYN LI G C + L A R +D M +KG PNV TYN LI
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SV 496
G+CK+ +G +L M KG PN S++++I GL G E+ V++ G S+
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308
Query: 497 ESDSWNFLL 505
+ ++N L+
Sbjct: 309 DEVTYNTLI 317
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 153/327 (46%), Gaps = 35/327 (10%)
Query: 74 FSHNYDTYHSII--HKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAG 128
FS + TY+++I H +A + DA+ ++L ++K+ P++ + R+Y
Sbjct: 411 FSPSVVTYNALINGHCIA-GKMVDAI-AVLEDMKEKGLTPDVVSYSTVLSGFCRSYD--- 465
Query: 129 RPELAVKTFLRIEKFNVQRSVR----SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN 184
V LR+++ V + ++ + ++L+ + +R +F + + + P+
Sbjct: 466 -----VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLF-DEMLRVGLPPD 519
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
FT LI A C + D++ AI++ +EM G++P++VT++ ++ G + AKR+
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLL 579
Query: 245 DILDRGWVPDATTYTVLMD---------------GYIKLGRLTDAVKVMDEMEDNGVEPN 289
+ VP TY L++ G+ G +T+A +V + M + +P+
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPD 639
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
Y VMI C+G +A +L +M++ ++ + ++ L +EGKV + +
Sbjct: 640 GTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIA 699
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKI 376
+LR + + + ++ +EG +
Sbjct: 700 NVLRSCELSEAEQAKVLVEINHREGNM 726
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL------------- 227
V+P+V T ++LI L K+ A R+L ++ VP+ VT+ T++
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 228 --GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
G+ +G + A +VF +L++ PD T Y V++ G+ + G + A + EM +G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ VT +++ K K E +++ ++L+ + + ++++ EG ++
Sbjct: 671 FLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 346 ELWKRLLRKNCMPD 359
++ + + +P+
Sbjct: 731 DVLAEMAKDGFLPN 744
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 195/383 (50%), Gaps = 37/383 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ + LL+A+ + ++D+V + + N +T +ILI
Sbjct: 679 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGIPHNHYTYSILI 737
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G PN+VT +++L GY I A + + G+
Sbjct: 738 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 797
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T+ L+ G + ++A+ ++D M G +P+ VTYGV++ CK + A NL
Sbjct: 798 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 857
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC- 371
L+ M Q K P + +ID LC+ ++DA L+K + K P+ S++I LC
Sbjct: 858 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 917
Query: 372 ----------------------------------KEGKIWEAKKLFDEFERGSI-PSLLT 396
KEGK+ EA+KL+DE + SI PS++T
Sbjct: 918 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 977
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y++LI G C L EA ++++ MV K P+V TYN LI+GFCK +EG+ + EM
Sbjct: 978 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 1037
Query: 457 DKGCFPNKTSFSLLIEGLYESGN 479
+G N ++++LI+GL+++G+
Sbjct: 1038 QRGLVGNTVTYNILIQGLFQAGD 1060
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 226/474 (47%), Gaps = 17/474 (3%)
Query: 11 APSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKF 70
APS LL+ I C +++ Y ++L + LD A+ +F K
Sbjct: 632 APS-LLKDIKSGVCK-KALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKS 689
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
P S + ++ +A+ FD V SL E QN I + +I + +
Sbjct: 690 RPFPS--IIEFSKLLSAIAKMNKFDVVISL-GEQMQNLGIPHNHYTYSILINCFCRRSQL 746
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVF 186
LA+ ++ K + ++ +L++LLN +KR LV MF PN
Sbjct: 747 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ-----PNTV 801
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI L + A+ ++D M + G P+LVT+ ++ G RGD + A + +
Sbjct: 802 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
P Y ++DG K + DA+ + EME G+ PN VTY +I C +
Sbjct: 862 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A LL DM++RK P +ID +EGK+ +A +L+ +++++ P S++
Sbjct: 922 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981
Query: 367 IHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
I+ C ++ EAK++F EF + P ++TYNTLI G C+ + E ++ +M ++G
Sbjct: 982 INGFCMHDRLDEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ N TYN+LIQG + G+ I +EM+ G PN +++ L++GL ++G
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 181/332 (54%), Gaps = 2/332 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+V+ K+YD+V + + +++T NI+I C V A+ +
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVV-ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P+ VT +++ G+ R + +A + +++ G+ PD Y ++D K
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
R+ DA E+E G+ PN VTY ++ C + +A LL DM+++K P+
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EF 386
++D + GKV +A EL++ ++R + PD S++I+ LC +I EA ++FD
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G + +++YNTLI G C++ + + +L+ +M ++G+ N TYN LIQGF + G+
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +M G P+ ++++L+ GL ++G
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 517
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 228/503 (45%), Gaps = 44/503 (8%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK--FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ R+ L LAL + K + PN + H + A V+ +
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
Q + F T+I L + A+ R+ Q + + ++N L +
Sbjct: 796 YQPNTVT-----FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
DL + N + K+ P V N +I LCK ++ A+ + EM + G+ PN+VT++
Sbjct: 851 TDLAFNLL-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ G +A R+ D+++R PD T++ L+D ++K G+L +A K+ DEM
Sbjct: 910 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED- 343
++P+ VTY +I FC + EA+ + + M+ + P +I C+ +VE+
Sbjct: 970 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029
Query: 344 ----------------------------------ACELWKRLLRKNCMPDNAISSTIIHW 369
A E++K ++ P+ +T++
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK GK+ +A +F+ +R + P++ TYN +I GMC++ ++ + L+ ++ KGV+P+
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
V YN +I GFC+ G+ +E + +EM + G PN ++ LI G+ +++
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 1209
Query: 489 MATASGSVESDSWNFLLTRIVSD 511
+ G S L+T ++ D
Sbjct: 1210 EMRSCGFAGDASTIGLVTNMLHD 1232
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
T L + N DL M K+ + P++ N L+ A+ K + I + +M
Sbjct: 162 TRLRDIKLNDAIDLFSDMVKS-----RPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 216
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+G+ +L T ++ + + A + G +L G+ PD T L++G+ + R++D
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 276
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
AV ++D+M + G +P+ V Y +I++ CK K+ +A + ++ ++ P+ +++
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
LC + DA L +++K P+ S ++ K GK+ EAK+LF+E R SI P
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++TY++LI G+C + EA +++D MV KG +V +YN LI GFCK ++G+++
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
EM +G N +++ LI+G +++G+ + + S G + D W +
Sbjct: 457 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTY 506
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 226/457 (49%), Gaps = 7/457 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+RL R L+ A+ +F K P F D ++ ++ + + + +D V SL ++
Sbjct: 157 ERLSKTRLRDIKLNDAIDLFSDMVKSRP-FPSIVD-FNRLLSAIVKLKKYDVVISLGKKM 214
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ I+ F VI + + LA+ ++ K + ++ +L+N + R
Sbjct: 215 -EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 273
Query: 165 Y-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D V L+ K +K P++ N +I +LCK V A E+ G+ PN+VT+
Sbjct: 274 VSDAVSLVDKMVEIGYK--PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 331
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T ++ G +A R+ D++ + P+ TY+ L+D ++K G++ +A ++ +EM
Sbjct: 332 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 391
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
++P+ VTY +I C + EA + D M+ + + +I+ C+ +VED
Sbjct: 392 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 451
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
+L++ + ++ + + +T+I + G + +A++ F + + G P + TYN L+
Sbjct: 452 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 511
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ EL +A +++DM ++ ++ ++ TY +I+G CK G +E + + KG P
Sbjct: 512 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 571
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
+ +++ ++ GL G EV + + G +++D
Sbjct: 572 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 608
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 175/402 (43%), Gaps = 35/402 (8%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I + A R E +K F + + + + + NTL+ Q D F
Sbjct: 438 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF- 496
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F + P+++T NIL+ LC ++E A+ + ++M M ++VT+TT++ G G +E
Sbjct: 497 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 556
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F + +G PD TYT +M G G L + + +M+ G+ N+ T
Sbjct: 557 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT------ 610
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPS------SALCCKVIDLL----------------- 335
G + A L+ ML Y PS S +C K + LL
Sbjct: 611 -LSDGDITLSAE-LIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSR 668
Query: 336 --CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP- 392
E K++DA L+ +++ P S ++ + K K L ++ + IP
Sbjct: 669 NGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH 728
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ TY+ LI C ++L A + M++ G EPN+ T + L+ G+C E + ++
Sbjct: 729 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 788
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++M G PN +F+ LI GL+ E ++ A G
Sbjct: 789 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 830
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 198/476 (41%), Gaps = 65/476 (13%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY ++++ L + + LL+++ K P + L ++N G+ A
Sbjct: 327 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN----GKVLEA 382
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + + ++ + + ++L+N L + R D + MF K + +V + N LI
Sbjct: 383 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLIN 441
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE +++ EM G+V N VT+ T++ G+ GD++ A+ F + G P
Sbjct: 442 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 501
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY +L+ G G L A+ + ++M+ ++ + VTY +I CK K EA +L
Sbjct: 502 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 561
Query: 314 DDMLQRKYVPS--------SALCCKVI-------------------DLLCEEGKVEDACE 346
+ + P S LC K + D +G + + E
Sbjct: 562 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAE 621
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCK---------------------------EGKIWEA 379
L K++L P ++ I +CK E K+ +A
Sbjct: 622 LIKKMLSCGYAP--SLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDA 679
Query: 380 KKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF E + PS++ ++ L++ + + + L + M G+ N +TY++LI
Sbjct: 680 VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 739
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
FC+ + +L +M+ G PN + S L+ G S E +V +G
Sbjct: 740 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 10/269 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDA 96
P + L++ LD A Q+F + H P+ TY+++I + + +
Sbjct: 973 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV----TYNTLIKGFCKYKRVEE 1028
Query: 97 VESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ E+ Q + G + + +I+ AG ++A + F + V ++ + NTL
Sbjct: 1029 GMEVFREMSQRGLV--GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L+ L +N + + ++F+ + K+ P ++T NI+I+ +CK VE + + G
Sbjct: 1087 LDGLCKNGKLEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++V + T++ G+ +G E A +F ++ + G +P++ Y L+ ++ G +
Sbjct: 1146 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 1205
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ EM G + T G++ G+
Sbjct: 1206 ELIKEMRSCGFAGDASTIGLVTNMLHDGR 1234
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 193/383 (50%), Gaps = 37/383 (9%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + K++DLV + ++ ++++ NILI C++ + A+ V
Sbjct: 79 SIVEFNKLLSAIAKMKKFDLV-ISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+ L+ G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D+M G +P+ VTYG ++ CK A +LL M + K +
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC---------------- 371
+ID LC+ ++DA L+ ++ K PD +++I LC
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 372 -------------------KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
KEGK+ EA+KL+DE + SI P + TY++LI G C L
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +++ M+ K PNV TYN LI+GFCK +EG+ + EM +G N +++ LI
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 472 EGLYESGNEGEVGKVVSMATASG 494
+GL+++G+ K+ + G
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDG 460
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 215/435 (49%), Gaps = 7/435 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
T++++IH L +L+ ++ Q C +L + V+ G +LA+
Sbjct: 187 TFNTLIHGLFLHNKASEAVALVDQMVQRG---CQPDLVTYGAVVNGLCKRGDIDLALSLL 243
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++EK ++ V NT+++ L + K D +F K + P+VFT N LI LC
Sbjct: 244 KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK-GIRPDVFTYNSLISCLCN 302
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A R+L M + PN+VT + ++ +V G + A++++ +++ R PD T
Sbjct: 303 YGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ L++G+ RL +A + + M PN VTY +I+ FCK K+ E L +M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR V ++ +I L + G + A +++K+++ PD S ++ LCK GK+
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +F+ ++ + P + TYN +I GMC++ ++ + L+ + KGV+PNV Y +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
GFC+ G +E + EM + G P+ ++ LI G++ +++ + G V
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 497 ESDSWNFLLTRIVSD 511
S ++ ++ D
Sbjct: 603 GDASTISMVINMLHD 617
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 177/354 (50%), Gaps = 38/354 (10%)
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
NAL+ K D + L + + + +P++ N L+ A+ K + I + + M ++ +
Sbjct: 54 NALLNLKLDDAIGLFGEMVQSR--PLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRI 111
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+L ++ ++ + R + A V G ++ G+ PD T + L++GY R++DAV
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 171
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
++D+M + G +P+ VT+ +I K+ EA L+D M+QR P V++ LC
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLC 231
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLL 395
+ G ++ A L K++ + D I +TII LCK I +A LF++ E +G P +
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291
Query: 396 TYNTLIAGMC-----------------------------------ESAELTEAGRLWDDM 420
TYN+LI+ +C + +L EA +L+D+M
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+++ ++P++FTY+ LI GFC E + E M+ K CFPN +++ LI+G
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 114/229 (49%), Gaps = 4/229 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVK 135
N TY+++I +A+ + L E+ Q + G + + T+I+ AG ++A K
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F ++ V + + + LL+ L + + + ++F+ K K+ P+++T NI+I+ +
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPDIYTYNIMIEGM 510
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK VE + + G+ PN++ +TT++ G+ +G E A +F ++ + G +PD+
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
Y L+ ++ G + +++ EM G + T ++I G+
Sbjct: 571 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ +A LF E + +PS++ +N L++ + + + L + M + ++++YN
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+LI FC+ + +L +M+ G P+ + S L+ G S
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHS 163
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 204/397 (51%), Gaps = 12/397 (3%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ R D V SL ++++ +I+C F +I+ + + A+ TF +I K +
Sbjct: 89 VVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 148 SVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V + NTLL+ L R +L H MF+ + PNV T L+ LC++ +
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR-----PNVVTFTTLMNGLCREGRIVE 202
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLM 262
A+ +LD M G+ P +T+ TI+ G +GD +A + + + +P+ Y+ ++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K GR +DA + EM++ G+ P+ TY MI FC + +A LL +ML+RK
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I+ +EGK +A EL+ +L + +P+ S++I CK+ ++ A+ +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F +G P+L+T+NTLI G C + + + L +M E G+ + TYN LI GF
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G+ + +L+EM+ G P+ + L++GL ++G
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 202/381 (53%), Gaps = 6/381 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV L+ +V+ +R DLV +++ K ++ ++++ ILIK C + A+
Sbjct: 78 SVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ +G+ P++VT T+L G + A +F + + P+ T+T LM+G +
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSA 326
GR+ +AV ++D M ++G++P ++TYG +++ CK + A NLL M + + +P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +ID LC++G+ DA L+ + K PD +++I C G+ +A++L E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
ER P ++TYN LI + + EA L+D+M+ +G+ PN TY+ +I GFCK
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFL 504
+ M KGC PN +F+ LI+G + + +++ T +G V ++ ++N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 505 LT--RIVSDLDSGAGALDELL 523
+ +V DL++ L E++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMI 457
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I+ + + + +LL ++++ I ++ +I + GR A F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ + + + N+++ + R+ + + + K+ P+V T N LI A K+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEG 339
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+++++ G+ + ++ A+ +F + +G P+ T+
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM + G+ + TY +I F A +LL +M+
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++D M K P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+ LI G+CK G +G+ + EM +G N ++ LI G + GN
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 214/458 (46%), Gaps = 28/458 (6%)
Query: 57 LDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
L AL F K HP+ T+++++H L D V L Q E C
Sbjct: 130 LPFALSTFGKITKLGLHPDVV----TFNTLLHGLCVE---DRVSEALNLFHQMFETTCRP 182
Query: 115 NL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM- 171
N+ F T++ GR AV R+ + +Q + + T+++ + K+ D V +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC--KKGDTVSALN 240
Query: 172 -FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ ++PNV + +I +LCK A + EM G+ P+L T+ +++ G+
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G +A+++ ++L+R PD TY L++ ++K G+ +A ++ DEM G+ PN
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY MI+ FCK + A ++ M + P+ +ID C +++D EL
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ + D +T+IH G + A L E G P ++T +TL+ G+C++ +
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 410 LTEAGRLWDDMVEK-----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
L +A ++ M + GVEP+V TYN+LI G G E + EEM +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGS 495
G P+ ++S +I+GL + E ++ SM + S S
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 209/427 (48%), Gaps = 21/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N Y +II L + ++L TE+++ +LF ++I + +GR A
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP---DLFTYNSMIVGFCSSGRWSDAE 310
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + + V + N L+NA V+ ++ ++ + ++PN T + +I
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDG 369
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK++ ++ A + M + G PNL+T T++ GY I++ + ++ + G V D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TTY L+ G+ +G L A+ ++ EM +G+ P+ VT +++ C K +A +
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 315 DMLQRK-----------YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
M + K P +I L EGK +A EL++ + + +PD
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S++I LCK+ ++ EA ++FD S P+++T+ TLI G C++ + + L+ +M
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G+ N TY LI GF K+GN + I +EM+ G +P+ + ++ GL+ ++ E
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW---SKEE 666
Query: 483 VGKVVSM 489
+ + V+M
Sbjct: 667 LKRAVAM 673
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I + + E LL E+ K +P++ L ++ EL +
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R + + + +++++ + R D MF K PN+ T N LI C
Sbjct: 352 LPR----GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK-GCSPNLITFNTLIDGYC 406
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + +L EM G+V + T+ T++ G+ GD+ A + +++ G PD
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ TY ++I K
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+ +T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ CK G++ + +LF E RG + + +TY TLI G + + A ++ +M+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ G K + +LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 72/311 (23%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +F D+L +P + LM +++ R + + +ME + + ++ +
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 296 MIEAFCKGKK-----------------------------------SGEARNLLDDMLQRK 320
+I+ FC K EA NL M +
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKR------------------------------ 350
P+ +++ LC EG++ +A L R
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 351 -LLRK-----NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
LLRK + +P+ I S II LCK+G+ +A+ LF E E+G P L TYN++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C S ++A +L +M+E+ + P+V TYN LI F K G E + +EML +G PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 464 KTSFSLLIEGL 474
++S +I+G
Sbjct: 360 TITYSSMIDGF 370
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P P + ++ +Q LD A +F+ S N T++++I A+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKR 410
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D LL E+ + + + T+I + L G A+ + + + + +
Sbjct: 411 IDDGMELLHEMTETGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 154 TLLNALVQNKRYDLVHLMFK---------NSRHKFK-VVPNVFTCNILIKALCKKDDVEG 203
TLL+ L N + MFK ++ H F V P+V T NILI L +
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A + +EMP G+VP+ +T+++++ G + ++ A ++F + + + P+ T+T L++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K GR+ D +++ EM G+ N +TY +I F K A ++ +M+ P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 324 SS 325
+
Sbjct: 650 DT 651
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 31/331 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY S+I + DA E + + C NL F T+I Y A R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATK---GCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + + + NTL++ N DL+ M + + P++ TC+
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-----LCPDIVTCDT 470
Query: 191 LIKALCKKDDVEGAIRVLDEM-----------PSMGMVPNLVTHTTILGGYVWRGDIENA 239
L+ LC ++ A+ + M P G+ P++ T+ ++ G + G A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ ++ RG VPD TY+ ++DG K RL +A ++ D M PN VT+ +I
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC---EEGKVEDACELWKRLLRKNC 356
+CK + + L +M +R V ++ I L+C + G + A ++++ ++
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAI---TYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
PD ++ L + ++ A + ++ +
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 89/572 (15%)
Query: 1 MLRHLHQKITAPSCLLQSIGGARCS-------LSTITVTPPIKPWPQRLYP---KRLVSM 50
R + Q + PS + +S +S + PI+P + L P K +++
Sbjct: 6 FFRSVIQFYSKPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALEPLVPFLSKNIITS 65
Query: 51 IFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+ + + N L + F +A + S ++ +I L+ D L ELK
Sbjct: 66 VIKDEVNRQLGFRFFIWASRRERLRSRE--SFGLVIDMLSEDNGCDLYWQTLEELKSGG- 122
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
+ F +I Y G E AV++F R+++F+ + V + N +L +++ + + ++
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLA 182
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
N K PN++T IL+ L KK A ++ D+M G+ PN VT+T ++ G
Sbjct: 183 FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG---- 285
RG ++A+++F ++ G PD+ + L+DG+ KLGR+ +A +++ E +G
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302
Query: 286 -------------------------------VEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
++P+ + Y ++I+ K K +A LL
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + P + VI LC G +E+ L + PD + +I +C+ G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 375 KIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEA-------------------- 413
+ EA+++F E E+ G PS+ T+N LI G+C+S EL EA
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 414 ---GRLWDDMVEK----------------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
R +D MVE G P++ +YN+LI GFC+ G+ +++L
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ KG P+ +++ LI GL+ G E E K+
Sbjct: 543 LQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN--AKRVFGDIL 247
+LI A K E A+ M P++ T+ IL + R ++ A V+ ++L
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-VMMREEVFFMLAFAVYNEML 190
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
P+ T+ +LMDG K GR +DA K+ D+M G+ PN VTY ++I C+ +
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+AR L +M P S ++D C+ G++ +A EL + + + S++I
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + + +A +L+ + +I P ++ Y LI G+ ++ ++ +A +L M KG+
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ + YN +I+ C G +EG + EM + FP+ + ++LI + +G E ++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 487 VSMATASG 494
+ SG
Sbjct: 431 FTEIEKSG 438
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 11/350 (3%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPEL 132
S N TY +I L + + D L E++ N N ++ + GR
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN---ALLDGFCKLGRMVE 286
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + EK +R ++L++ L + +RY ++ N K + P++ ILI
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK-NIKPDIILYTILI 345
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ L K +E A+++L MPS G+ P+ + ++ RG +E + + ++ +
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PDA T+T+L+ + G + +A ++ E+E +G P+ T+ +I+ CK + EAR L
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 313 LDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
L M + ++ S + D + E G + A PD + +I+
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 369 WLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
C+ G I A KL + + +G P +TYNTLI G+ EA +L+
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE-AKKLFDEFE 387
C +I + G E A E + R+ +C PD + I+ + +E + A +++E
Sbjct: 131 CVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEML 190
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ + P+L T+ L+ G+ + ++A +++DDM +G+ PN TY +LI G C+ G+A
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ ++ EM G +P+ + + L++G + G E +++ + G V
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 161/414 (38%), Gaps = 57/414 (13%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEI--KCGENLFITVIRNYGLAGRPELAVKTFL 138
Y+++I L + SL E+ + C + I + GL E + F
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE---EIFT 432
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV--VPNVF-----TCNIL 191
IEK SV + N L++ L ++ L+ HK +V ++F + N
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLL----HKMEVGRPASLFLRLSHSGNRS 488
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ + + A R L G P++V++ ++ G+ GDI+ A ++ + +G
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD+ TY L++G ++GR +A K+ +D
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFYAKDD---------------------------- 580
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIHWL 370
+ S A+ ++ C + KV A LW + L+K +C+ D ++ I
Sbjct: 581 ---------FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDE--TANEIEQC 629
Query: 371 CKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
KEG+ A ++L + R +L Y + G+C+S EA ++ + EK +
Sbjct: 630 FKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTP 689
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ LI G CK I + LD + L+ L ES + E+
Sbjct: 690 PSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEI 743
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 232/459 (50%), Gaps = 22/459 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P R L+ ++ N++ AL+I N TY+++I +A+A
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEM--ITRGLKLNVVTYNAMIGGIAKAGEMAKAM 401
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
SL E+ P+ L ++++ +A EL + R + S + + L
Sbjct: 402 SLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR----KLTPSPFTYSVL 457
Query: 156 LNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
++ L + K +++ M +N V PNVF LIKA ++ E AI +L M
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNG-----VKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ G++P+L + ++ G +E AK + D+ ++G P+A TY ++ Y K G +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A + +M +G+ PN V Y ++I+ C + EA + ML++ +P +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
I L + GK ++A ++ + L+ +PD + +++I CKEG I +A +L+DE I
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692
Query: 392 -PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+++ YNTLI G+C+ E+T+A L+D++ EK + P+V TY+ +I G+CK GN E +
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+ +EM+ KG P+ + +LI+G G EG + K +S+
Sbjct: 753 LFDEMISKGISPDGYIYCILIDG---CGKEGNLEKALSL 788
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 169/316 (53%), Gaps = 1/316 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K+ P+ FT ++LI LC D++ A VLD+M G+ PN+ + T++ YV E A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ G +PD Y L+ G + ++ +A ++ +M + G++PN TYG I
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+ K + A DML VP++ + +I C+ G +A +K +L K +PD
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
S IIH L K GK EA +F +F + G +P + YN+LI+G C+ ++ +A +L+D
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M+ G+ PN+ YN LI G CK+G + + +E+ +K P+ ++S +I+G +SG
Sbjct: 686 EMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSG 745
Query: 479 NEGEVGKVVSMATASG 494
N E K+ + G
Sbjct: 746 NLTEAFKLFDEMISKG 761
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 226/458 (49%), Gaps = 27/458 (5%)
Query: 80 TYHSIIHKLARARAFDAVES--LLTELKQNPEIKCGENLFITVIRNYGLAGRPEL-AVKT 136
TY ++I A + D ++ +L+E+++ +C NLF N + G + AV
Sbjct: 244 TYTNVIK--AHCKVGDVIKGKMVLSEMEK----ECKPNLFT---YNAFIGGLCQTGAVDE 294
Query: 137 FLRIEKFNVQRSV----RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
L ++K +++ + + L++ + KR L+F+ S + PN FT LI
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFE-SMPSSGLNPNRFTYTALI 353
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K+ ++E A+R+ DEM + G+ N+VT+ ++GG G++ A +F ++L G
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLE 413
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY +L+DGY+K + A +++ EM+ + P+ TY V+I C +A +
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
LD M++ P+ + +I +E + E A EL K ++ +PD + +I LC+
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
K+ EAK L D E+G P+ TY I +S E+ A R + DM+ G+ PN
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y +LI+G C +GN E + + ML+KG P+ ++S +I L ++G E V
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 492 ASGSVESDSWNFLLTRIVS------DLDSGAGALDELL 523
+G V FL ++S D++ + DE+L
Sbjct: 654 KTGVVPD---VFLYNSLISGFCKEGDIEKASQLYDEML 688
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 191/406 (47%), Gaps = 8/406 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N Y ++I + ++ LL + N P++ C L I + R A + E A
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR----AKKVEEA 540
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + ++ + + +N ++ + FK+ +VPN ILIK
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS-GIVPNNVIYTILIK 599
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C + A+ M G++P++ ++ I+ G + A VF L G VP
Sbjct: 600 GHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVP 659
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y L+ G+ K G + A ++ DEM NG+ PN V Y +I CK + +AR L
Sbjct: 660 DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELF 719
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D++ ++ VP +ID C+ G + +A +L+ ++ K PD I +I KE
Sbjct: 720 DEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 779
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
G + +A LF E ++ S+ SL +N+LI C+ ++ EA L+DDMV+K + PN+ TY
Sbjct: 780 GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 839
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+LI + K +E ++ +M + PN +++ L+ + GN
Sbjct: 840 ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 219/459 (47%), Gaps = 41/459 (8%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY + I+ +++ E ++ + I ++ +I+ + G A+ T
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSG-IVPNNVIYTILIKGHCDVGNTVEALST 613
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + +R+ + ++++L +N + +F K VVP+VF N LI C
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL-KTGVVPDVFLYNSLISGFC 672
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ D+E A ++ DEM G+ PN+V + T++ G G++ A+ +F +I ++ VPD
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVV 732
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY+ ++DGY K G LT+A K+ DEM G+ P+ Y ++I+ K +A +L +
Sbjct: 733 TYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA 792
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
Q+K V S + +ID C+ GKV +A EL+ ++ K P+ + +I K +
Sbjct: 793 -QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMM 851
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA++LF + E R IP+ LTY +L+ + + L+ DM +G+ + Y ++
Sbjct: 852 EEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVM 911
Query: 436 IQGFCKIGNAKEGIRILEEMLDKG------------------------------------ 459
+CK G + E +++L + L +G
Sbjct: 912 ASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEEL 971
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+KT +LL+ G Y+SGNE E KV+ + G V +
Sbjct: 972 SLSSKTCNTLLL-GFYKSGNEDEASKVLGVMQRLGWVPT 1009
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 220/431 (51%), Gaps = 13/431 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+ +I L RA+ + + LL ++ + IK + + I Y +G ++A + F
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGAFINLYSKSGEIQVAERYF--- 579
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV----VPNVFTCNILIKALC 196
K + + N + L++ D+ + + S K + +P++ + +I +L
Sbjct: 580 -KDMLSSGIVPNNVIYTILIKG-HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+ V + G+VP++ + +++ G+ GDIE A +++ ++L G P+
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++G KLG +T A ++ DE+E+ + P+ VTY +I+ +CK EA L D+M
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + P + C +ID +EG +E A L+ +K+ +A +S +I CK GK+
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS-LIDSFCKHGKV 816
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA++LFD+ ++ P+++TY LI ++ + EA +L+ DM + + PN TY L
Sbjct: 817 IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG- 494
+ + +IGN + I + ++M +G + ++ ++ + G E K+++ + G
Sbjct: 877 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936
Query: 495 SVESDSWNFLL 505
+E D ++ L+
Sbjct: 937 KLEDDVFDALI 947
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 35/327 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + CN L++ L K + + +V M +VP++ T+T ++ + GD+ K V
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 243 FGD----------------------------------ILDRGWVPDATTYTVLMDGYIKL 268
+ ++++G PD TYT+L+DG+ K
Sbjct: 265 LSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQ 324
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
R +A + + M +G+ PN TY +I+ F K EA + D+M+ R +
Sbjct: 325 KRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTY 384
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
+I + + G++ A L+ +L PD + +I K + +A +L E +
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKA 444
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
R PS TY+ LI+G+C S++L +A + D M+ GV+PNVF Y LI+ + + +
Sbjct: 445 RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGL 474
I +L+ M+ G P+ ++ LI GL
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGL 531
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 134/255 (52%), Gaps = 2/255 (0%)
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+V+G +++ VPD TYT ++ + K+G + V+ EME +PN TY I
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGL 286
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ EA + M+++ P ++D C++ + ++A +++ + P+
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I KEG I EA ++ DE RG +++TYN +I G+ ++ E+ +A L+++
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ G+EP+ +TYN+LI G+ K + + +L EM + P+ ++S+LI GL S +
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 480 EGEVGKVVSMATASG 494
+ +V+ +G
Sbjct: 467 LQKANEVLDQMIRNG 481
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 162/368 (44%), Gaps = 12/368 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L+S ++ +++ A Q+ Y H + N Y+++I+ L +
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQL--YDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
L E+++ P++ + T+I Y +G A K F + + L
Sbjct: 717 ELFDEIEEKDLVPDVVT----YSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ + + +F ++ K V ++ N LI + CK V A + D+M
Sbjct: 773 IDGCGKEGNLEKALSLFHEAQQK--SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 830
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ PN+VT+T ++ Y +E A+++F D+ R +P+ TYT L+ Y ++G +
Sbjct: 831 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 890
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ +ME G+ + + YGVM A+CK KS EA LL+ L + +I L
Sbjct: 891 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 950
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSL 394
C+E ++ EL + ++ + +T++ K G EA K+ +R G +P+
Sbjct: 951 CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 1010
Query: 395 LTYNTLIA 402
L+ I+
Sbjct: 1011 LSLTDSIS 1018
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N + + I+ F EA ++ + + P+ C ++ L + + +++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESA 408
++ +PD + +I CK G + + K + E E+ P+L TYN I G+C++
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTG 290
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ EA + M+EKG+ P+ TY +L+ GFCK +KE I E M G PN+ +++
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 469 LLIEGLYESGNEGEVGKV 486
LI+G + GN E ++
Sbjct: 351 ALIDGFIKEGNIEEALRI 368
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 185/377 (49%), Gaps = 10/377 (2%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVP 183
G AVK IE + + +V NT+++ L + N+ YDL M ++R F P
Sbjct: 129 GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM--DARGIF---P 183
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ T LI C + GA +LDEM + P + + ++ G+++ AK +
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ G P TY+ LMDGY +G + +A ++ M GV PN +Y +MI CK
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 303
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K+ EA NLL +ML + VP + +ID LC+ G++ A L + + D
Sbjct: 304 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 363
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
++++ LCK + +A LF + ERG P++ TY LI G+C+ L A L+ ++
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 423
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KG +V+TY ++I G CK G E + I +M D GC PN +F ++I L+E +
Sbjct: 424 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 483
Query: 483 VGKVVSMATASGSVESD 499
K++ A G + D
Sbjct: 484 AEKLLHEMIAKGLLVLD 500
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 169/328 (51%), Gaps = 2/328 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +L +L + K+Y L + + N T NILI C + + VL ++
Sbjct: 13 FNKILGSLAKMKQY-LTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKI 71
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G P+ +T T++ G +G+++ + ++ +G+ D +Y L++G K+G
Sbjct: 72 LKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGET 131
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
AVK++ +ED PN V Y +I+ CK K EA +L +M R P + +
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
I C G++ A L ++ KN P I + +I+ LCKEG + EAK L + I
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251
Query: 392 -PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P ++TY+TL+ G C E+ A +++ MV+ GV PNV++YN++I G CK E +
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+L EML K P+ +++ LI+GL +SG
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSG 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML ++ P K++ L + + A L K++ K + + +I+ C G+
Sbjct: 1 MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60
Query: 376 IWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ + + + + G P +T NTL+ G+C E+ ++ D +V +G + + +Y
Sbjct: 61 MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ G CKIG + +++L + D+ PN ++ +I+GL + E + S A G
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180
Query: 495 SV-ESDSWNFLLTR--IVSDLDSGAGALDELLVKN 526
++ ++ L+ ++ L LDE+++KN
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 204/381 (53%), Gaps = 6/381 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV L+ +V+ +R DLV +++ K ++ ++++ NILIK C + A+
Sbjct: 78 SVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ +G+ P++VT TT+L G + A +F + + P+ T+T LM+G +
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSA 326
GR+ +AV ++D M ++G++P ++TYG +++ CK + A NLL M + + +P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +ID LC++G+ DA L+ + K PD +++I C G+ +A++L E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
ER P ++TYN LI + + EA L+D+M+ +G+ PN TY+ +I GFCK
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFL 504
+ M KGC PN +F+ LI+G + + +++ T +G V ++ ++N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 505 LT--RIVSDLDSGAGALDELL 523
+ +V DL++ L E++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMI 457
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 203/397 (51%), Gaps = 12/397 (3%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ R D V SL ++++ +I+C F +I+ + + A+ TF +I K +
Sbjct: 89 VVRMERPDLVISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 148 SVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V + TLL+ L R +L H MF+ + PNV T L+ LC++ +
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCR-----PNVVTFTTLMNGLCREGRIVE 202
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLM 262
A+ +LD M G+ P +T+ TI+ G +GD +A + + + +P+ Y+ ++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K GR +DA + EM++ G+ P+ TY MI FC + +A LL +ML+RK
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I+ +EGK +A EL+ +L + +P+ S++I CK+ ++ A+ +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F +G P+L+T+NTLI G C + + + L +M E G+ + TYN LI GF
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G+ + +L+EM+ G P+ + L++GL ++G
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I+ + + + +LL ++++ I ++ +I + GR A F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ + + + N+++ + R+ + + + K+ P+V T N LI A K+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEG 339
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+++++ G+ + ++ A+ +F + +G P+ T+
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM + G+ + TY +I F A +LL +M+
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++D M K P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+ LI G+CK G +G+ + EM +G N ++ LI G + GN
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 209/427 (48%), Gaps = 21/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N Y +II L + ++L TE+++ +LF ++I + +GR A
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP---DLFTYNSMIVGFCSSGRWSDAE 310
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + + V + N L+NA V+ ++ ++ + ++PN T + +I
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDG 369
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK++ ++ A + M + G PNL+T T++ GY I++ + ++ + G V D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TTY L+ G+ +G L A+ ++ EM +G+ P+ VT +++ C K +A +
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 315 DMLQRK-----------YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
M + K P +I L EGK +A EL++ + + +PD
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S++I LCK+ ++ EA ++FD S P+++T+ TLI G C++ + + L+ +M
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G+ N TY LI GF K+GN + I +EM+ G +P+ + ++ GL+ ++ E
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW---SKEE 666
Query: 483 VGKVVSM 489
+ + V+M
Sbjct: 667 LKRAVAM 673
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 213/458 (46%), Gaps = 28/458 (6%)
Query: 57 LDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
L AL F K HP+ T+ +++H L D V L Q E C
Sbjct: 130 LPFALSTFGKITKLGLHPDVV----TFTTLLHGLCVE---DRVSEALNLFHQMFETTCRP 182
Query: 115 NL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM- 171
N+ F T++ GR AV R+ + +Q + + T+++ + K+ D V +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC--KKGDTVSALN 240
Query: 172 -FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ ++PNV + +I +LCK A + EM G+ P+L T+ +++ G+
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G +A+++ ++L+R PD TY L++ ++K G+ +A ++ DEM G+ PN
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY MI+ FCK + A ++ M + P+ +ID C +++D EL
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ + D +T+IH G + A L E G P ++T +TL+ G+C++ +
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 410 LTEAGRLWDDMVEK-----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
L +A ++ M + GVEP+V TYN+LI G G E + EEM +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGS 495
G P+ ++S +I+GL + E ++ SM + S S
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I + + E LL E+ K +P++ L ++ EL +
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R + + + +++++ + R D MF K PN+ T N LI C
Sbjct: 352 LPR----GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK-GCSPNLITFNTLIDGYC 406
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + +L EM G+V + T+ T++ G+ GD+ A + +++ G PD
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ TY ++I K
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+ +T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ CK G++ + +LF E RG + + +TY TLI G + + A ++ +M+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ G K + +LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 72/311 (23%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +F D+L +P + LM +++ R + + +ME + + ++ +
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 296 MIEAFCKGKK-----------------------------------SGEARNLLDDMLQRK 320
+I+ FC K EA NL M +
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKR------------------------------ 350
P+ +++ LC EG++ +A L R
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 351 -LLRK-----NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
LLRK + +P+ I S II LCK+G+ +A+ LF E E+G P L TYN++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C S ++A +L +M+E+ + P+V TYN LI F K G E + +EML +G PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 464 KTSFSLLIEGL 474
++S +I+G
Sbjct: 360 TITYSSMIDGF 370
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P P + ++ +Q LD A +F+ S N T++++I A+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKR 410
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D LL E+ + + + T+I + L G A+ + + + + +
Sbjct: 411 IDDGMELLHEMTETGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 154 TLLNALVQNKRYDLVHLMFK---------NSRHKFK-VVPNVFTCNILIKALCKKDDVEG 203
TLL+ L N + MFK ++ H F V P+V T NILI L +
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A + +EMP G+VP+ +T+++++ G + ++ A ++F + + + P+ T+T L++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K GR+ D +++ EM G+ N +TY +I F K A ++ +M+ P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 324 SS 325
+
Sbjct: 650 DT 651
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 31/331 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY S+I + DA E + + C NL F T+I Y A R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATK---GCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + + + NTL++ N DL+ M + + P++ TC+
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-----LCPDIVTCDT 470
Query: 191 LIKALCKKDDVEGAIRVLDEM-----------PSMGMVPNLVTHTTILGGYVWRGDIENA 239
L+ LC ++ A+ + M P G+ P++ T+ ++ G + G A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ ++ RG VPD TY+ ++DG K RL +A ++ D M PN VT+ +I
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC---EEGKVEDACELWKRLLRKNC 356
+CK + + L +M +R V ++ I L+C + G + A ++++ ++
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAI---TYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
PD ++ L + ++ A + ++ +
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 235/454 (51%), Gaps = 10/454 (2%)
Query: 25 SLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSI 84
S+ST+ P K + + VS++ R+++ AL IF+ A + F+HN TY +
Sbjct: 42 SISTMETNPKTK----FISHESTVSLMKRERDPQRALDIFNKASQ-QKGFNHNNATYSVL 96
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF- 143
+ L R + F AV+++L ++K + E+LF+ ++R++ + ++ F I+
Sbjct: 97 LDNLVRHKKFLAVDAILHQMKYET-CRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIA 155
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V+ S+ +++T LN L+ + DL + ++H + PN NIL+K CK D++
Sbjct: 156 RVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDS 215
Query: 204 AIRVLDEMPSMGM-VPNLVTHTTILGGYVWRGDIENAKRVFGDILD-RGWVPDATTYTVL 261
A RV++EM G+ PN +T++T++ + + A +F D++ RG PD + V+
Sbjct: 216 AFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVM 275
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++G+ + G + A ++D M+ NG PN Y ++ FCK K EA+ + D++ +
Sbjct: 276 INGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGL 335
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+ +++ LC G++++A +L + C D + I+ L EG+ EA +
Sbjct: 336 KLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQ 395
Query: 382 LFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ D++ G + +Y ++ +C + EL +A + M ++G+ P+ T+N L+ C
Sbjct: 396 MLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLC 455
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ GN + G+R+L L G P S+ ++E +
Sbjct: 456 ESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESI 489
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 214/432 (49%), Gaps = 20/432 (4%)
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGR---PELAVKTFLRIEK---FNVQRSVRS 151
ES ++ ++ NP+ K FI+ L R P+ A+ F + + FN + S
Sbjct: 40 ESSISTMETNPKTK-----FISHESTVSLMKRERDPQRALDIFNKASQQKGFNHNNATYS 94
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ LL+ LV++K++ V + +++ N L++ + D + + + + +
Sbjct: 95 V--LLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLN-LMRHFSRFDLHDKVMEMFNLI 151
Query: 212 PSMGMV-PNLVTHTTILGGYVWRGDIENAKRVF-GDILDRGWVPDATTYTVLMDGYIKLG 269
+ V P+L +T L + G+++ A+++ + P+ + +L+ + K G
Sbjct: 152 QVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNG 211
Query: 270 RLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSAL 327
+ A +V++EM+ +G+ PN +TY +++ +S EA L +DM+ ++ + P +
Sbjct: 212 DIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVI 271
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I+ C G+VE A + + + C P+ S +++ CKEGKI EAK++FDE +
Sbjct: 272 FNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVK 331
Query: 388 RGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ + + Y TL+ +C + E+ EA +L +M + TYN++++G G ++
Sbjct: 332 KTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSE 391
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLL 505
E +++L++ +G NK S+ +++ L +G + K +S+ + G +WN L+
Sbjct: 392 EALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELV 451
Query: 506 TRIVSDLDSGAG 517
R+ ++ G
Sbjct: 452 VRLCESGNTEIG 463
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 169/392 (43%), Gaps = 23/392 (5%)
Query: 1 MLRH-----LHQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQ 55
++RH LH K+ L+Q I + SL+ I+ ++++
Sbjct: 131 LMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTC---------------LNLLIDSG 175
Query: 56 NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
+DLA ++ YA K + N ++ ++ + D+ ++ E+K++
Sbjct: 176 EVDLARKLLLYA-KHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSI 234
Query: 116 LFITVIRNYGLAGRPELAVKTFL-RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ T++ R + AV+ F I K + N ++N ++ + ++
Sbjct: 235 TYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDF 294
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ K PNV+ + L+ CK+ ++ A +V DE+ G+ + V +TT++ G
Sbjct: 295 MK-KNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNG 353
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+I+ A ++ G++ DA TY V++ G GR +A++++D+ GV N+ +Y
Sbjct: 354 EIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYR 413
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ A C + +A L M +R P A +++ LCE G E + L
Sbjct: 414 IILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGI 473
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+P ++ +CKE K+ +L D
Sbjct: 474 GLIPAPKSWGAVVESICKERKLVHVFELLDSL 505
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 226/453 (49%), Gaps = 21/453 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIF---HYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
P R L+ + +Q+ L+ A + + G F N + Y +I L + R D
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA-----YSILIDGLLKGRNAD 332
Query: 96 AVESLLTELKQ-----NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
A L+ E+ +P + + FI V+ G E A F + F V R
Sbjct: 333 AANGLVHEMVSHGFSIDPMMY---DYFICVMSK---EGAMEKAKALFDGMITFGVTPGAR 386
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ +L+ + K + + + + +V + +T +K +C D++GA ++ E
Sbjct: 387 AYASLIEGFFREKNVRKGYELLVEIKKR-NIVISPYTYGTAVKGMCSSGDLDGAYNIVKE 445
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G PN+V +TT++ ++ + +A RV ++ ++G PD Y L+ G K +
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A + EM +NG +P+ TYG I + + + A + +ML+ +P+ LC
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+I+ C++GKV +AC ++ ++ + + D + +++ L K GK+ +A+++F E +G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + +Y TLI G + + +A ++D+MV+ G+ NV YNML+ GFC+ G ++
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+L+EM KG PN ++ +I+G +SG+ E
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAE 718
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 241/517 (46%), Gaps = 61/517 (11%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF 74
+++ +G + C + + T IK + Q+ V ++ + +A F
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTF---------- 491
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PE---------------------- 109
Y+S+I L++A+ D S L E+ +N P+
Sbjct: 492 -----CYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADK 546
Query: 110 -----IKCG----ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
++CG + L +I Y G+ A F + + + ++ L+N LV
Sbjct: 547 YVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLV 606
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+N + + +F R K + P+VF+ LI K +++ A + DEM G+ N+
Sbjct: 607 KNGKVNDAEEIFHEMRGK-GIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNV 665
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+ + +LGG+ G+IE AK + ++ +G+ P+A TY ++DGY K G L +A ++ DE
Sbjct: 666 IIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDE 725
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M+ G+ P+ Y +++ C+ A + + ++ SSA +I+ + + GK
Sbjct: 726 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVFKFGK 784
Query: 341 VEDACELWKRLLR----KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLL 395
E ++ RL+ K P++ + +I +LCKEG + AK+LF ++ ++ P+++
Sbjct: 785 TELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVI 844
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY +L+ G + +E ++D+++ G+EP+ Y+++I F K G + + +L++M
Sbjct: 845 TYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Query: 456 -----LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+D GC + ++ L+ G + G KVV
Sbjct: 905 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVV 941
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 175/356 (49%), Gaps = 13/356 (3%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+PN C LI CKK V A M G++ + T+T ++ G V G + +A+
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAE 615
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++ +G PD +Y L+DG+ KLG + A + DEM G+ N + Y +++ F
Sbjct: 616 EIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGF 675
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ + +A+ LLD+M + + P++ C +ID C+ G + +A +L+ + K +PD+
Sbjct: 676 CRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE--SAELTE--AGRL 416
+ +T++ C+ + A +F+ E+G S +N LI + + ELT RL
Sbjct: 736 FVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRL 795
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
D +K +PN TYN++I CK GN + + M P +++ L+ G +
Sbjct: 796 MDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDK 855
Query: 477 SGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD-LDSGAGA-----LDELLVKN 526
G E+ V A+G +E D N + + I++ L G LD++ KN
Sbjct: 856 MGRRSEMFSVFDEVIAAG-IEPD--NIMYSVIINAFLKEGMTTKALVLLDQMFAKN 908
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 1/292 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VP+ + N+LI LCK+ +E A +L EM S+G+ + V ++ ++ G + + + A
Sbjct: 276 LVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAAN 335
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ +++ G+ D Y + K G + A + D M GV P Y +IE F
Sbjct: 336 GLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGF 395
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K + LL ++ +R V S + +C G ++ A + K + C P+
Sbjct: 396 FREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNV 455
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
I +T+I ++ + +A ++ E E+G P YN+LI G+ ++ ++ EA +
Sbjct: 456 VIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
MVE G +P+ FTY I G+ + G + ++EML+ G PNK + LI
Sbjct: 516 MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLI 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 164/346 (47%), Gaps = 23/346 (6%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L++ ++ D +F +++ +VP++ CN L+ AL K++ ++ V M
Sbjct: 158 LIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVE 217
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVF--------------GDILD-------RGWV 252
+V ++ ++ ++G + G+++ AK V + L+ +G V
Sbjct: 218 RNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLV 277
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P +Y +L+DG K RL DA ++ EM G+ + V Y ++I+ KG+ + A L
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGL 337
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ +M+ + + I ++ +EG +E A L+ ++ P +++I +
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
E + + +L E +R + S TY T + GMC S +L A + +M G PNV
Sbjct: 398 EKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVI 457
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
Y LI+ F + + +R+L+EM ++G P+ ++ LI GL ++
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 12/272 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F N TY +II ++ L E+K + ++ T++ E A
Sbjct: 696 FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVP-DSFVYTTLVDGCCRLNDVERA 754
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCN 189
+ F EK S N L+N + + + D+++ + S KF PN T N
Sbjct: 755 ITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGK-PNDVTYN 812
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
I+I LCK+ ++E A + M ++P ++T+T++L GY G VF +++
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-----EDNGVEPNEVTYGVMIEAFCKGK 304
G PD Y+V+++ ++K G T A+ ++D+M D+G + + T ++ F K
Sbjct: 873 GIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 932
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ A ++++M++ KY+P S+ ++I+ C
Sbjct: 933 EMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 46/233 (19%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLD---------EMPSMGMV-------------- 217
+VP+ F L+ C+ +DVE AI + + P ++
Sbjct: 731 LVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTD 790
Query: 218 ---------------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
PN VT+ ++ G++E AK +F + +P TYT L+
Sbjct: 791 MINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+GY K+GR ++ V DE+ G+EP+ + Y V+I AF K + +A LLD M + V
Sbjct: 851 NGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAV 910
Query: 323 P-----SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
S + C ++ + G++E A ++ + ++R +PD SST+I +
Sbjct: 911 DDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPD---SSTVIELI 960
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 56/278 (20%)
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
VW + + G DR + +L+DGYI+ G L +AV V +D
Sbjct: 133 VWSSIVRCLREFVGKSDDR-----VLLFGILIDGYIEKGFLDEAVFVFSSTKD------- 180
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
L VPS A C ++D L + +++ +++K
Sbjct: 181 --------------------------LDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF--DEFERGSIPSLLTYNTLIAGMCESA 408
++ +N + D +I C++G + AK + E E G+ +
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGT---------------ATL 259
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ EA L M KG+ P+ +YN+LI G CK ++ +L EM G F + ++S
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYS 319
Query: 469 LLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLL 505
+LI+GL + N + G V M + S++ +++ +
Sbjct: 320 ILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFI 357
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 243/514 (47%), Gaps = 46/514 (8%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PE 109
++++LD A ++F+ N Y +IH L AR D L ++K + P
Sbjct: 265 QRKDLDSAFKVFNEMPL--KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
++ + +I++ + R A+ +E+ ++ ++ + L+++L +++
Sbjct: 323 VR----TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS---------------- 213
+ K ++PNV T N LI CK+ +E A+ V++ M S
Sbjct: 379 ELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 214 ---------MGMV---------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
MG++ P++VT+ +++ G G+ ++A R+ + DRG VPD
Sbjct: 438 YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT ++D K R+ +A + D +E GV PN V Y +I+ +CK K EA +L+
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML + +P+S +I LC +GK+++A L +++++ P + + +IH L K+G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
A F + G+ P TY T I C L +A + M E GV P++FTY+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI+G+ +G +L+ M D GC P++ +F LI+ L E + G + S
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 495 SVESDSWNFLLTRIVS-DLDSGAGALDELLVKNC 527
+E D+ LL ++V + A + ++L++ C
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 245/559 (43%), Gaps = 96/559 (17%)
Query: 32 TPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA 91
+P +K + P + S+ + AL H+ + +P + H+ +Y S++ L
Sbjct: 78 SPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQ-NPRYKHSVYSYASLLTLLINN 136
Query: 92 RAFDAVESL-LTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
V + L +K + G+ L++ + R R EL K +
Sbjct: 137 GYVGVVFKIRLLMIKSCDSV--GDALYVLDLCRKMNKDERFELKYKLI-----------I 183
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRV 207
NTLLN+L R+ LV M + KV PN++T N ++ CK +VE A +
Sbjct: 184 GCYNTLLNSLA---RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY 240
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG----------------- 250
+ ++ G+ P+ T+T+++ GY R D+++A +VF ++ +G
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 251 ------------------WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
P TYTVL+ R ++A+ ++ EME+ G++PN T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE------ 346
Y V+I++ C K +AR LL ML++ +P+ +I+ C+ G +EDA +
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 347 ----------------------------LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ ++L + +PD +++I C+ G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +L +RG +P TY ++I +C+S + EA L+D + +KGV PNV Y LI
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG--- 494
G+CK G E +LE+ML K C PN +F+ LI GL G E + G
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 495 SVESDSWNFLLTRIVSDLD 513
+V +D+ L+ R++ D D
Sbjct: 601 TVSTDT--ILIHRLLKDGD 617
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 198/449 (44%), Gaps = 57/449 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+I R+ FD+ LL+ L + + + + ++I + + R E A F
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ V +V L++ + + D HLM + K +PN T N LI LC
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADG 581
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + ++M +G+ P + T T ++ + GD ++A F +L G PDA TYT
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+ Y + GRL DA +M +M +NGV P+ TY +I+ + ++ A ++L M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 320 KYVPSSALCCKVIDLLCE------EGKVEDAC------------ELWKRLLRKNCMPDNA 361
PS +I L E +G + C EL ++++ + P+
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+I +C+ G + A+K+FD +R G PS L +N L++ C+ + EA ++ DD
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD---------------------- 457
M+ G P + + +LI G K G + G + + +L
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Query: 458 -------------KGCFPNKTSFSLLIEG 473
GC + ++SLLIEG
Sbjct: 882 VEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 202/399 (50%), Gaps = 40/399 (10%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
D AL +FH F H+Y +Y ++++KLAR+R F+AVE++L L Q+ ++C + LF
Sbjct: 62 DKALSLFH--DYLQNGFRHDYPSYSALVYKLARSRRFEAVETVLGYL-QDFNVRCRDTLF 118
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSR 176
I + +YG G A++ F + FN R+++S N LLN LV N R +D L ++S
Sbjct: 119 IALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSE 178
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
F++ N NILIK KK + A +V DEM + P++VT+ +++G G++
Sbjct: 179 MGFRL--NSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGEL 236
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
AK +F D++ +G P+A TY +LM+G +G +A K++ +ME G +P + +GV+
Sbjct: 237 GKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVL 296
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ K K EA+ LL +M +R++ P + +I+ LC+EGKV +A
Sbjct: 297 MNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEA------------ 344
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
K LF+ G + TY L G C+ E E ++
Sbjct: 345 ----------------------YKTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKV 382
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+ M+ P + T+N + G K G+ +LEEM
Sbjct: 383 LNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEM 421
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 195/404 (48%), Gaps = 4/404 (0%)
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
I + N P+ A+ F + + S + L+ L +++R++ V +
Sbjct: 49 IPFVNNVKEVEDPDKALSLFHDYLQNGFRHDYPSYSALVYKLARSRRFEAVETVL-GYLQ 107
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
F V L + K V AIR+ +EM + L + +L V +
Sbjct: 108 DFNVRCRDTLFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLF 167
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+AK++F + G+ ++ + +L+ G++K G A KV DEM + VEP+ VTY +I
Sbjct: 168 DAKQLFDRSSEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLI 227
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
C+ + G+A+ L DM+++ P++ +++ LC G+ ++A ++ + + C
Sbjct: 228 GYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCK 287
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRL 416
P N +++ L K+GKI EAK L E ++ P ++ YN LI +C+ ++ EA +
Sbjct: 288 PKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKT 347
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+M G E N TY ML GFC++G +EG+++L ML P +F+ + GL +
Sbjct: 348 LFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMK 407
Query: 477 SGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGAL 519
SG+ +G + M +++SD W L R GAG++
Sbjct: 408 SGSIDGAFFVLEEMEKRKMALDSDGWE-ALVRCCCSEHRGAGSV 450
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 10/250 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE--NLFITVIRNYGLA--GRPELAVK 135
TY+S+I L R + L ++ IK G+ N + GL G + A K
Sbjct: 222 TYNSLIGYLCRNGELGKAKGLFKDM-----IKKGKRPNAVTYALLMEGLCSMGEYKEAKK 276
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+E + + L+N L + + + L+ + + + P+V NILI L
Sbjct: 277 MLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKR-RFRPDVVIYNILINHL 335
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK+ V A + L EM G N T+ + G+ G+ E +V +L P
Sbjct: 336 CKEGKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRI 395
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+ + G +K G + A V++EME + + + ++ C + + L +
Sbjct: 396 ETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDSDGWEALVRCCCSEHRGAGSVLLCES 455
Query: 316 MLQRKYVPSS 325
+++ V +S
Sbjct: 456 LIRHNLVVAS 465
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 110/274 (40%), Gaps = 36/274 (13%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I+ + G A K F + + V+ SV + N+L+ L +N +FK+
Sbjct: 188 FNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMI 247
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K K PN T +L++ LC + + A ++L +M G P + ++ +G I
Sbjct: 248 KKGKR-PNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKI 306
Query: 237 ENAKRVFGDILDRGWVPD-----------------------------------ATTYTVL 261
E AK + ++ R + PD A TY +L
Sbjct: 307 EEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRML 366
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
DG+ ++G + +KV++ M + P T+ + K A +L++M +RK
Sbjct: 367 ADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKM 426
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
S ++ C E + + L + L+R N
Sbjct: 427 ALDSDGWEALVRCCCSEHRGAGSVLLCESLIRHN 460
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 172/328 (52%), Gaps = 1/328 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N LL+A+V+ ++Y + + PN T NILI C V+ VL ++
Sbjct: 93 FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G+ P ++T TT++ G G+ A +F D++ RG PD TYT +++G K+G
Sbjct: 153 IKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGET 212
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A ++ +M + G +P+ VTY +I++ CK + EA ++ M + P+ +
Sbjct: 213 AAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSL 272
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I LC + ++A + + N MPD S +I CKEG + EA+ + E G
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+++TYN+L+ G E+ EA +L+D M+ +G +P+VF+Y++LI G+C + E +
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ EM+ +G PN S++ LI + G
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLG 420
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 201/383 (52%), Gaps = 7/383 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY +II+ L + A L+ K+ E+ C ++ + T+I + A+ F
Sbjct: 198 TYTTIINGLCKMGETAAAAGLI---KKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIF 254
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + +V S +L+ L R+ M N ++P++ T ++LI CK
Sbjct: 255 SYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAML-NEMTSLNIMPDIVTFSLLIDIFCK 313
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ +V A VL M MG+ PN++T+ +++ GY + ++ A+++F ++ RG PD +
Sbjct: 314 EGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFS 373
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y++L++GY + R+ +A ++ +EM G+ PN V+Y +I AFC+ K EAR L DM
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Y+P +++ C++G + A L++ + P+ + + +I +CK G +
Sbjct: 434 TNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLN 493
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A+KLF E F G P + Y T+I G+C+ L EA + M E G PN F+YN++I
Sbjct: 494 HARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVII 553
Query: 437 QGFCKIGNAKEGIRILEEMLDKG 459
+GF + + ++++ EM DKG
Sbjct: 554 RGFLQHKDESRAVQLIGEMRDKG 576
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 210/424 (49%), Gaps = 9/424 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
T+ ++I+ L +A F L ++ P++ + T+I G A
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYT----YTTIINGLCKMGETAAAAGL 218
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + Q V + +TL+++L +++ + +F + K + P V + LI+ LC
Sbjct: 219 IKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAK-GISPTVVSYTSLIQGLC 277
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ A +L+EM S+ ++P++VT + ++ + G++ A+ V + + G P+
Sbjct: 278 SFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVI 337
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY LM GY + +A K+ D M G +P+ +Y ++I +C K+ EA+ L ++M
Sbjct: 338 TYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEM 397
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + P++ +I C+ GK+ +A EL+K + +PD S ++ CK+G +
Sbjct: 398 IHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYL 457
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +LF + + P+L+ Y LI MC+S L A +L+ ++ G++P+V Y +
Sbjct: 458 GKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTI 517
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G CK G E + +M + GC PN+ S++++I G + +E +++ G
Sbjct: 518 INGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGF 577
Query: 496 VESD 499
V +
Sbjct: 578 VADE 581
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV-KVMDEMEDNGVEPNEVTY 293
+I++A F +L R +P + L+ +++ + DAV + +ME G+ PN T
Sbjct: 70 NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++I FC + ++L +++ P+ +I+ LC+ G+ A EL+ ++
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA 189
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ C PD +TII+ LCK G+ A L + E G P ++TY+TLI +C+ + E
Sbjct: 190 RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNE 249
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A ++ M KG+ P V +Y LIQG C KE +L EM P+ +FSLLI+
Sbjct: 250 ALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLID 309
Query: 473 GLYESGNEGEVGKVVSMATASG 494
+ GN E V+ T G
Sbjct: 310 IFCKEGNVLEAQGVLKTMTEMG 331
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN+ ILI ++CK ++ A ++ E+ G+ P++ +TTI+ G G ++ A
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEA 533
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
F + + G P+ +Y V++ G+++ + AV+++ EM D G +E T
Sbjct: 534 FRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 223/453 (49%), Gaps = 23/453 (5%)
Query: 43 YPKRLVSMIFR--QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+ L+ ++ R + N D +L+ F A K P F + +Y I+H L+RAR + V
Sbjct: 96 FSNELMDLVLRNLRLNPDASLEFFKLASK-QPKFRPDVSSYCKIVHILSRARMYKEVRVY 154
Query: 101 LTEL----KQN--------------PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK 142
L EL K N E +F +++ Y G + A+ F + K
Sbjct: 155 LNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGK 214
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
S+RS N+LL+ LVQN L+ ++P++F+ I++ A CK+ V+
Sbjct: 215 CGRVPSLRSCNSLLSNLVQNGE-AFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVD 273
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A + EM PN+VT+ +++ GYV GD+ AK+V + ++G ++ TYT+L+
Sbjct: 274 EAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLI 333
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
GY K G++ A K+ M + + +E YGV+I A+C + +A + D ML+
Sbjct: 334 KGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLK 393
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
++ +C +I+ C+ G V A E+ + N PD+ +T++ CK+ +A KL
Sbjct: 394 MNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKL 453
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
DE +G +++TYNTL+ + + A +W+ M ++GV PN TY L+ F K
Sbjct: 454 CDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFK 513
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+G + I ++ L KG + T ++ +I G
Sbjct: 514 VGTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+LI A C V+ A+R+ D M +G+ N V +++ GY G + A V + D
Sbjct: 366 VLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDW 425
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
PD+ Y L+DG+ K A K+ DEM + GV VTY +++ A
Sbjct: 426 NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
++ + M +R P+ C ++D + G + A +WK L K + +T+I
Sbjct: 486 LHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICG 545
Query: 370 LCKEGKIWEAKKLF 383
CK K+ +A+++F
Sbjct: 546 FCKMEKLVQAQEIF 559
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 8/278 (2%)
Query: 77 NYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+S+I L V +L++E K PE + +I+ Y G+ E A
Sbjct: 290 NVVTYNSLIDGYVSLGDVCGAKKVLALMSE-KGIPE---NSRTYTLLIKGYCKRGQMEQA 345
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K F + + N+ L++A R D L +++ K + N CN LI
Sbjct: 346 EKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDA-LRIRDAMLKVGLKMNTVICNSLIN 404
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK V A VL M + P+ + T+L G+ + D A ++ ++ ++G
Sbjct: 405 GYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNF 464
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY L+ +G + A+ + + M GV PNEVTY +++AF K A +
Sbjct: 465 TVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIW 524
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
D L + + S L +I C+ K+ A E++ ++
Sbjct: 525 KDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 106/225 (47%), Gaps = 25/225 (11%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ +Y ++ + + E R L++++ +LC+ + A +
Sbjct: 130 PDVSSYCKIVHILSRARMYKEVRVYLNELV----------------VLCKNNYIASA--V 171
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCK----EGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
W L+ + + + S T+ + K +G A +FD + G +PSL + N+L++
Sbjct: 172 WDELV--SVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLS 229
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ ++ E +A +++ M+ G+ P++F+Y +++ +CK G E ++EM C P
Sbjct: 230 NLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEP 289
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR 507
N +++ LI+G G+ KV+++ + G E+ LL +
Sbjct: 290 NVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIK 334
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++I Y G A + + ++ +N++ NTLL+ + + + + + H
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF-IKAFKLCDEMHN 459
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V V T N L+K L VE A+ + + M G+ PN VT+ T+L + G +
Sbjct: 460 KGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDR 519
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
A ++ D L +G+ T Y ++ G+ K+ +L A ++ +M++
Sbjct: 520 AMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 219/391 (56%), Gaps = 13/391 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
Q+ D AL +F+ + F H+Y +Y ++++KLAR+R F+AVE+LL L QN I+C E
Sbjct: 463 QDPDDALSLFNQYQQM--GFKHDYPSYSALVYKLARSRNFEAVETLLDYL-QNINIRCRE 519
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFK 173
LFI +I++YG + PE AV+ F R+ FN R++ S NTLLN LV+N R+ D + + +
Sbjct: 520 TLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDR 579
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+++ F+ N + NI+IK K + + A +V +EM + P +VT +++G +
Sbjct: 580 STKMGFR--RNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGK 637
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
GD++ A + D++ + P+A TY +LM+G LG+ +A K+M +M+ G +P + +
Sbjct: 638 GDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNF 697
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
GV++ + + +++ LL +M +R++ P +I+ LC+EG+ +A ++ +
Sbjct: 698 GVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQV 757
Query: 354 KNCMPDNAISSTIIHWLCK----EGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAE 409
C P+ A ++ C+ EG + K L G P L ++ L+ G+ ++ +
Sbjct: 758 GGCEPNAATYRMMVDGFCQVEDFEGGL---KVLSAMLMCGHCPRLESFCDLVVGLLKNGK 814
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ A + ++M ++ + ++ + L++ C
Sbjct: 815 IDGACFVLEEMEKRKMRFHLEAWEALVKDAC 845
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 192/401 (47%), Gaps = 8/401 (1%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTC 188
P+ A+ F + ++ + S + L+ L +++ ++ V + ++ + +F
Sbjct: 465 PDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIA 524
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K E A+ + MPS LV+ T+L V +A +F
Sbjct: 525 --LIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTK 582
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC-KGKKSG 307
G+ ++ ++ +++ G++ G A +V +EM D V+P VT+ +I C KG G
Sbjct: 583 MGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDG 642
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL+DM+Q+++ P++ +++ LC GK ++A ++ + + C P ++
Sbjct: 643 -AMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLM 701
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + G+I ++K L E +R P ++TYN LI +C+ EA ++ +M G E
Sbjct: 702 SDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCE 761
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGK 485
PN TY M++ GFC++ + + G+++L ML G P SF L+ GL ++G +G
Sbjct: 762 PNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFV 821
Query: 486 VVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKN 526
+ M ++W L+ D GAG L L +N
Sbjct: 822 LEEMEKRKMRFHLEAWEALVKDACPG-DRGAGGLVRELKQN 861
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 213/431 (49%), Gaps = 51/431 (11%)
Query: 121 IRNYGLAGRPELAVKTFLR------IEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+R YG++ PE R IE F ++V S N LL L R + +F
Sbjct: 226 VRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLF 285
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN------------- 219
+ P+V T ILI C ++E A+++LD+M + G+ PN
Sbjct: 286 D----EMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCD 341
Query: 220 -------------LVTH---------TTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+V H TT+L G+ +GD+ +A+R F ++ +G D T
Sbjct: 342 KGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVT 401
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT L++G + G L +A KV+ EM ++ +EVTY V+++ +CK K EA + + M+
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR P+ + D LC++G V+ A EL + K + +++I+ LCK G +
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD 521
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A + + + + P + TY TLI +C+S EL A L +M++ G++P + TYN+L+
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLM 581
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
GFC G + G ++LE ML+K PN T+++ L++ Y GN + + S +V
Sbjct: 582 NGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ-YCIGNNMKSTTEIYKGMCSRNV 640
Query: 497 E--SDSWNFLL 505
E +++N L+
Sbjct: 641 EPNENTYNILI 651
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 192/399 (48%), Gaps = 8/399 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+ ++ L A + L E+ P++ + +I Y G E AVK
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVT----YGILIHGYCALGELENAVKL 316
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ V+ + +++ L R D + ++ HK + V+T ++
Sbjct: 317 LDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYT--TVLSGF 374
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C K D+ A R DEM G+ + VT+TT++ G G+++ A++V ++L R D
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYTVL+DGY K G++ +A +V + M GV PN VTY + + CK A LL +
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + ++ +I+ LC+ G ++ A + PD +T+I LCK G+
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A L E + G P+++TYN L+ G C S + +L + M+EK + PN TYN
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L++ +C N K I + M + PN+ ++++LI+G
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 145/294 (49%), Gaps = 1/294 (0%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T +L+ CK+ + A +V + M G+ PN+VT+T + G +GD++ A + ++
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++G +A TY L++G K G L A++ M +M+ G++P+ TY +I+A CK +
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A +LL +ML P+ +++ C G+VE +L + +L KN P+ +++
Sbjct: 556 DRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ C + +++ R P+ TYN LI G C++ + EA ++M+EKG
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+Y+ LI+ K E ++ +M +G ++ I+ + N
Sbjct: 676 RLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDN 729
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PNV T L LCK+ DV+ A +L EM + G+ N T+ +++ G G ++ A
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R D+ G PD TYT L+D K G L A ++ EM DNG++P VTY V++ F
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C + + LL+ ML++ P++ ++ C ++ E++K + +N P+
Sbjct: 585 CMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNE 644
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I CK + EA+ +E E+G + +Y+ LI + + + EA +L+ D
Sbjct: 645 NTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHD 704
Query: 420 MVEKG--VEPNVFTY 432
M ++G EP+V+ +
Sbjct: 705 MRKEGFTAEPDVYNF 719
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 10/289 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++ L + A LL E+ N ++ + ++I AG + A++T
Sbjct: 468 NVVTYTALSDGLCKQGDVQAANELLHEM-SNKGLELNACTYNSLINGLCKAGYLDQAMRT 526
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
++ ++ V + TL++AL + ++ +DL+ M N + P + T N+L+
Sbjct: 527 MADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG-----IKPTIVTYNVLM 581
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C VEG ++L+ M + PN T+ +++ Y ++++ ++ + R
Sbjct: 582 NGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVE 641
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +L+ G+ K + +A +EM + G +Y +I K KK EAR L
Sbjct: 642 PNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKL 701
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
DM + + + ID E +E L L+ + + A
Sbjct: 702 FHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIVKSKA 750
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LL + Q PS C V+ L +++A EL++ L KN N ++ LC
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDKNVCSYN----ILLKVLC 273
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ +A++LFDE S P ++TY LI G C EL A +L DDMV +GVEPN
Sbjct: 274 GAGRVEDARQLFDEM--ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATV 331
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
Y ++ C G + + ++E+M+ ++ ++ ++ G G+
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 233/453 (51%), Gaps = 42/453 (9%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR-------------------AFDAVESL 100
A+ +FH A F N ++ T + ++ LAR+R +F ++ +L
Sbjct: 58 AVSLFHSALDF--NLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSAL 115
Query: 101 LTELK--QNPEIKCGE-----------NLFITVIRNYGLA--GRPELAVKTFLRIEKFNV 145
+ Q P++ G N+FI I GL G A+ + + +V
Sbjct: 116 IECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSV 175
Query: 146 QRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ S NTL+N L + K+ + V L+ + PN TC L+ LCK ++ A
Sbjct: 176 SPDIVSYNTLINGLCKAKKLKEAVGLLLE--MEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L+ M G ++V + T++ G+ G+++ K +F ++L +G + TY+ L+ G
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+LG+ +A V++ M ++G+ P+ VTY +I+ CK ++ A +LL+ M+++ PS
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ ++ LC+EG V DA ++ + ++ K D +T++ LC +GK+ EA KLF+
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413
Query: 385 EF---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E P++ T+N LI G+C+ LT+A ++ MV+KG N+ TYNML+ G K
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G KE + + +++LD G PN ++S+LI+G
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 180/373 (48%), Gaps = 3/373 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F FN+ S + N L++AL +++ Y L +++ H V+P+ + + LI
Sbjct: 58 AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTH-VDVLPSFGSLSALI 116
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ + V+ + G N+ +L G G + A + ++ +
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD +Y L++G K +L +AV ++ EME G PN VT +++ CK + EA L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L+ M ++ + L +I C G ++ EL+ +L K + S ++H LC+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G+ EA + + E G P ++TY LI G+C+ T A L + MVEKG EP+ T
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMA 490
YN+L+ G CK G + +IL M++KG + +++ L++GL + G E K+ SM
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 491 TASGSVESDSWNF 503
+E + + F
Sbjct: 417 DNENCLEPNVFTF 429
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 174/359 (48%), Gaps = 12/359 (3%)
Query: 145 VQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V + L++ L ++ R DL++LM + P+ T N+L+ LCK+
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE-----PSNVTYNVLLSGLCKEGL 369
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG--WVPDATTY 258
V A ++L M G ++VT+ T++ G +G ++ A ++F + D P+ T+
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L+ G K GRLT AVK+ +M G N VTY +++ K K EA L +L
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+VP+S +ID C+ + A L+ + P +T++ LCKEG + +
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 549
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AK LF E + P ++++NT+I G ++ + L MVE G+ P+ T++ LI
Sbjct: 550 AKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 609
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
K+G E LE M+ G P+ + L++GL G+ E+ ++ A G+V
Sbjct: 610 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 201/455 (44%), Gaps = 44/455 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
+Y+++I+ L +A+ LL E++ C N GL GR + A++
Sbjct: 181 SYNTLINGLCKAKKLKEAVGLLLEMEA---AGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++K V TL++ N D +F K + NV T + L+ LC+
Sbjct: 238 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK-GISANVVTYSCLVHGLCR 296
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A VL+ M G+ P++VT+T ++ G G +A + ++++G P T
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y VL+ G K G + DA K++ M + G + + VTY +++ C K EA L + M
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 318 QRKYV--PSSALCCKVIDLLCEEG-----------------------------------K 340
+ P+ +I LC+EG K
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
+++A ELWK++L +P++ S +I CK + AK LF E G P+L YNT
Sbjct: 477 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 536
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+A +C+ L +A L+ +M EP++ ++N +I G K G+ + + +M++ G
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
P+ +FS LI L + G E + ASG
Sbjct: 597 LRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 223/477 (46%), Gaps = 30/477 (6%)
Query: 47 LVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
L+S NLD ++F GK S N TY ++H L R + ++L +
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGK---GISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311
Query: 106 QN---PEIKCGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQ 161
++ P++ L + ++ GR A+ L +EK +V + N LL+ L +
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKD----GRATHAMDLLNLMVEKGEEPSNV-TYNVLLSGLCK 366
Query: 162 N----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM--PSMG 215
+ ++ +M + + +V T N L+K LC K V+ A+++ + M
Sbjct: 367 EGLVIDAFKILRMMIEKGKK-----ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ PN+ T ++GG G + A ++ ++ +G + TY +L+ G +K G++ +A+
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ ++ D G PN TY ++I+ FCK + A+ L +M P+ ++ L
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL-FDEFERGSIPSL 394
C+EG +E A L++ + NC PD +T+I K G K+L E G P
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDA 601
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
LT++TLI + + EL EA + MV G P+ Y+ L++G G+ E I +L +
Sbjct: 602 LTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQ 661
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS---MATASGSVESDSWNFLLTRI 508
M KG ++ S ++ L S E +V +++ T+ G+ S S N LL ++
Sbjct: 662 MAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGA--SISCNELLMQL 716
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 170/364 (46%), Gaps = 40/364 (10%)
Query: 152 LNTLLNALVQ--NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
L T L +L Q N ++ +F +S F ++P+ TCN L+ AL + + A V
Sbjct: 40 LETQLRSLCQKPNSQFTEAVSLF-HSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYR 98
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M + ++P+ + + ++ + + V G +L RG+ + +++ G + G
Sbjct: 99 RMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNG 158
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ +A+ ++ EM V P+ V+Y +I
Sbjct: 159 GVFEAMGLIREMGRKSVSPDIVSYNTLING------------------------------ 188
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER- 388
LC+ K+++A L + C P++ +T++ LCK+G++ EA +L + ++
Sbjct: 189 -----LCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK 243
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G ++ Y TLI+G C + L L+D+M+ KG+ NV TY+ L+ G C++G KE
Sbjct: 244 GFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA 303
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTR 507
+L M + G P+ +++ LI+GL + G ++++ G S+ ++N LL+
Sbjct: 304 NTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSG 363
Query: 508 IVSD 511
+ +
Sbjct: 364 LCKE 367
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 204/412 (49%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY + + + + + +LL ++++ IK ++ +I GR + F+
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ + ++ + N ++ + R+ + + + K+ PNV T N LI A K+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEG 337
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+ +++ G+ + ++ A+ +F + +G PD T+T
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM G+ N VTY +I FC A +L M+
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++ M K P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+N LI G+CK G +G+ + EM +G + + LI G + GN
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 206/404 (50%), Gaps = 16/404 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ ++ + R D V SL ++++ +I+C F +I+ + + A+ TF ++
Sbjct: 84 FNKLMGAVVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142
Query: 141 EKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
K + V + TLL+ L + R DL H + + P+V T L+ LC
Sbjct: 143 TKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR---------PDVLTFTTLMNGLC 193
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDA 255
++ V A+ +LD M G+ P+ +T+ T + G GD +A + + + + P+
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y+ ++DG K GR +D+ + EM+D G+ PN VTY MI FC + A+ LL +
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML+RK P+ +I+ +EGK +A EL+ +L + +P+ +++I CK+ +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A+ +F +G P + T+ TLI G C + + + L +M +G+ N TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI GFC +G+ + + ++M+ G P+ + + L++GL ++G
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 20/394 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+ +I + + A + LL E+ K +P + L ++ EL
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R + + + N++++ + R D MF K P+VFT LI
Sbjct: 347 DEMLPR----GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLID 401
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C ++ + +L EMP G+V N VT+ T++ G+ GD+ A + ++ G P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCK 302
D T L+DG G+L DA+++ M+ NGVEP+ +TY ++I
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ CK G++ + +LF E RG + + Y TLI G + + A ++ +M+
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
GV P+ T ++ GF + + +LE++
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 161/359 (44%), Gaps = 69/359 (19%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV N L+ A+V+ +R DLV +++ K ++ ++++ ILIK C + A+
Sbjct: 80 SVIDFNKLMGAVVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY--------- 258
FG + G PD T+
Sbjct: 139 -----------------------------------FGKLTKLGLHPDVVTFTTLLHGLCL 163
Query: 259 ----------------------TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
T LM+G + GR+ +AV ++D M +NG++P+++TYG
Sbjct: 164 DHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTF 223
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ CK + A NLL M + ++ P+ + +ID LC++G+ D+ L+ + K
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
P+ + +I C G+ A++L E ER P+++TYN LI + + EA
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+D+M+ +G+ PN TYN +I GFCK + M KGC P+ +F+ LI+G
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 160/362 (44%), Gaps = 22/362 (6%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N TY+++I+ + F L E+ I + ++I + R + A
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP-NTITYNSMIDGFCKQDRLDAAE 378
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNI 190
F + V + TL++ KR D L+H M + +V N T N
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG-----LVANTVTYNT 433
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI---- 246
LI C D+ A+ + +M S G+ P++VT T+L G G +++A +F +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 247 --LD-----RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
LD G PD TY +L+ G I G+ +A ++ +EM G+ P+ +TY MI+
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK + EA + M + + P+ +I+ C+ G+V+D EL+ + R+ + D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
I T+I+ K G I A +F E G P +T ++ G EL A + +
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673
Query: 419 DM 420
D+
Sbjct: 674 DL 675
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E AI + +M +P+++ ++G V + ++ + + D ++T+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + +L A+ ++ G+ P+ VT+ ++ C + EA +L + +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P +++ LC EG+V +A L R++ PD T + +CK G A
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 381 KLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L + E S P+++ Y+ +I G+C+ +++ L+ +M +KG+ PN+ TYN +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
FC G R+L+EML++ PN +++ LI + G E ++
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ +++++ L + R D MF + K PNV T N LI CK V+ + + E
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSK-SFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+V + + + T++ G+ G+I A +F +++ G PD T ++ G+
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664
Query: 271 LTDAVKVMDEME 282
L AV ++++++
Sbjct: 665 LERAVAMLEDLQ 676
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 204/397 (51%), Gaps = 12/397 (3%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ R D V SL ++++ +I+C F +I+ + + A+ TF ++ K +
Sbjct: 89 VVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 147
Query: 148 SVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V + NTLL+ L R +L H MF+ + PNV T L+ LC++ +
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR-----PNVVTFTTLMNGLCREGRIVE 202
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLM 262
A+ +LD M G+ P +T+ TI+ G +GD +A + + + +P+ Y+ ++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K GR +DA + EM++ G+ P+ TY MI FC + +A LL +ML+RK
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I+ +EGK +A EL+ +L + +P+ S++I CK+ ++ A+ +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F +G P+L+T+NTLI G C + + + L +M E G+ + TYN LI GF
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G+ + +L+EM+ G P+ + L++GL ++G
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 202/381 (53%), Gaps = 6/381 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV L+ +V+ +R DLV +++ K ++ ++++ ILIK C + A+
Sbjct: 78 SVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ +G+ P++VT T+L G + A +F + + P+ T+T LM+G +
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSA 326
GR+ +AV ++D M ++G++P ++TYG +++ CK + A NLL M + + +P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +ID LC++G+ DA L+ + K PD +++I C G+ +A++L E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
ER P ++TYN LI + + EA L+D+M+ +G+ PN TY+ +I GFCK
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFL 504
+ M KGC PN +F+ LI+G + + +++ T +G V ++ ++N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 505 LT--RIVSDLDSGAGALDELL 523
+ +V DL++ L E++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMI 457
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I+ + + + +LL ++++ I ++ +I + GR A F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ + + + N+++ + R+ + + + K+ P+V T N LI A K+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEG 339
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+++++ G+ + ++ A+ +F + +G P+ T+
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM + G+ + TY +I F A +LL +M+
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++D M K P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+ LI G+CK G +G+ + EM +G N ++ LI G + GN
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 214/458 (46%), Gaps = 28/458 (6%)
Query: 57 LDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
L AL F K HP+ T+++++H L D V L Q E C
Sbjct: 130 LPFALSTFGKLTKLGLHPDVV----TFNTLLHGLCVE---DRVSEALNLFHQMFETTCRP 182
Query: 115 NL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM- 171
N+ F T++ GR AV R+ + +Q + + T+++ + K+ D V +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC--KKGDTVSALN 240
Query: 172 -FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ ++PNV + +I +LCK A + EM G+ P+L T+ +++ G+
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G +A+++ ++L+R PD TY L++ ++K G+ +A ++ DEM G+ PN
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY MI+ FCK + A ++ M + P+ +ID C +++D EL
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ + D +T+IH G + A L E G P ++T +TL+ G+C++ +
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 410 LTEAGRLWDDMVEK-----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
L +A ++ M + GVEP+V TYN+LI G G E + EEM +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGS 495
G P+ ++S +I+GL + E ++ SM + S S
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 209/427 (48%), Gaps = 21/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N Y +II L + ++L TE+++ +LF ++I + +GR A
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP---DLFTYNSMIVGFCSSGRWSDAE 310
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + + V + N L+NA V+ ++ ++ + ++PN T + +I
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDG 369
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK++ ++ A + M + G PNL+T T++ GY I++ + ++ + G V D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TTY L+ G+ +G L A+ ++ EM +G+ P+ VT +++ C K +A +
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 315 DMLQRK-----------YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
M + K P +I L EGK +A EL++ + + +PD
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S++I LCK+ ++ EA ++FD S P+++T+ TLI G C++ + + L+ +M
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G+ N TY LI GF K+GN + I +EM+ G +P+ + ++ GL+ ++ E
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW---SKEE 666
Query: 483 VGKVVSM 489
+ + V+M
Sbjct: 667 LKRAVAM 673
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I + + E LL E+ K +P++ L ++ EL +
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R + + + +++++ + R D MF K PN+ T N LI C
Sbjct: 352 LPR----GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK-GCSPNLITFNTLIDGYC 406
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + +L EM G+V + T+ T++ G+ GD+ A + +++ G PD
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ TY ++I K
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+ +T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ CK G++ + +LF E RG + + +TY TLI G + + A ++ +M+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ G K + +LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 72/311 (23%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +F D+L +P + LM +++ R + + +ME + + ++ +
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 296 MIEAFCKGKK-----------------------------------SGEARNLLDDMLQRK 320
+I+ FC K EA NL M +
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKR------------------------------ 350
P+ +++ LC EG++ +A L R
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 351 -LLRK-----NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
LLRK + +P+ I S II LCK+G+ +A+ LF E E+G P L TYN++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C S ++A +L +M+E+ + P+V TYN LI F K G E + +EML +G PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 464 KTSFSLLIEGL 474
++S +I+G
Sbjct: 360 TITYSSMIDGF 370
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P P + ++ +Q LD A +F+ S N T++++I A+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKR 410
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D LL E+ + + + T+I + L G A+ + + + + +
Sbjct: 411 IDDGMELLHEMTETGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 154 TLLNALVQNKRYDLVHLMFK---------NSRHKFK-VVPNVFTCNILIKALCKKDDVEG 203
TLL+ L N + MFK ++ H F V P+V T NILI L +
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A + +EMP G+VP+ +T+++++ G + ++ A ++F + + + P+ T+T L++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K GR+ D +++ EM G+ N +TY +I F K A ++ +M+ P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 324 SS 325
+
Sbjct: 650 DT 651
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 31/331 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY S+I + DA E + + C NL F T+I Y A R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATK---GCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + + + NTL++ N DL+ M + + P++ TC+
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-----LCPDIVTCDT 470
Query: 191 LIKALCKKDDVEGAIRVLDEM-----------PSMGMVPNLVTHTTILGGYVWRGDIENA 239
L+ LC ++ A+ + M P G+ P++ T+ ++ G + G A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ ++ RG VPD TY+ ++DG K RL +A ++ D M PN VT+ +I
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC---EEGKVEDACELWKRLLRKNC 356
+CK + + L +M +R V ++ I L+C + G + A ++++ ++
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAI---TYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
PD ++ L + ++ A + ++ +
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 203/381 (53%), Gaps = 6/381 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV L+ +V+ +R DLV +++ K ++ ++++ NILIK C + A+
Sbjct: 78 SVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ +G+ P++VT TT+L G + A F + + P+ T+T LM+G +
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSA 326
GR+ +AV ++D M ++G++P ++TYG +++ CK + A NLL M + + +P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +ID LC++G+ DA L+ + K PD +++I C G+ +A++L E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
ER P ++TYN LI + + EA L+D+M+ +G+ PN TY+ +I GFCK
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFL 504
+ M KGC PN +F+ LI+G + + +++ T +G V ++ ++N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 505 LT--RIVSDLDSGAGALDELL 523
+ +V DL++ L E++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMI 457
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 202/397 (50%), Gaps = 12/397 (3%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ R D V SL ++++ +I+C F +I+ + + A+ TF +I K +
Sbjct: 89 VVRMERPDLVISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 148 SVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V + TLL+ L R D H MF+ + PNV T L+ LC++ +
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR-----PNVVTFTTLMNGLCREGRIVE 202
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLM 262
A+ +LD M G+ P +T+ TI+ G +GD +A + + + +P+ Y+ ++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K GR +DA + EM++ G+ P+ TY MI FC + +A LL +ML+RK
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I+ +EGK +A EL+ +L + +P+ S++I CK+ ++ A+ +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F +G P+L+T+NTLI G C + + + L +M E G+ + TYN LI GF
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G+ + +L+EM+ G P+ + L++GL ++G
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I+ + + + +LL ++++ I ++ +I + GR A F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ + + + N+++ + R+ + + + K+ P+V T N LI A K+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEG 339
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+++++ G+ + ++ A+ +F + +G P+ T+
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM + G+ + TY +I F A +LL +M+
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++D M K P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+ LI G+CK G +G+ + EM +G N ++ LI G + GN
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 209/427 (48%), Gaps = 21/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N Y +II L + ++L TE+++ +LF ++I + +GR A
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP---DLFTYNSMIVGFCSSGRWSDAE 310
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + + V + N L+NA V+ ++ ++ + ++PN T + +I
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDG 369
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK++ ++ A + M + G PNL+T T++ GY I++ + ++ + G V D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TTY L+ G+ +G L A+ ++ EM +G+ P+ VT +++ C K +A +
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 315 DMLQRK-----------YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
M + K P +I L EGK +A EL++ + + +PD
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S++I LCK+ ++ EA ++FD S P+++T+ TLI G C++ + + L+ +M
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G+ N TY LI GF K+GN + I +EM+ G +P+ + ++ GL+ ++ E
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW---SKEE 666
Query: 483 VGKVVSM 489
+ + V+M
Sbjct: 667 LKRAVAM 673
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 213/458 (46%), Gaps = 28/458 (6%)
Query: 57 LDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
L AL F K HP+ T+ +++H L D V L Q E C
Sbjct: 130 LPFALSTFGKITKLGLHPDVV----TFTTLLHGLCVE---DRVSEALDFFHQMFETTCRP 182
Query: 115 NL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM- 171
N+ F T++ GR AV R+ + +Q + + T+++ + K+ D V +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC--KKGDTVSALN 240
Query: 172 -FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ ++PNV + +I +LCK A + EM G+ P+L T+ +++ G+
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G +A+++ ++L+R PD TY L++ ++K G+ +A ++ DEM G+ PN
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY MI+ FCK + A ++ M + P+ +ID C +++D EL
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ + D +T+IH G + A L E G P ++T +TL+ G+C++ +
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 410 LTEAGRLWDDMVEK-----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
L +A ++ M + GVEP+V TYN+LI G G E + EEM +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGS 495
G P+ ++S +I+GL + E ++ SM + S S
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I + + E LL E+ K +P++ L ++ EL +
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R + + + +++++ + R D MF K PN+ T N LI C
Sbjct: 352 LPR----GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK-GCSPNLITFNTLIDGYC 406
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + +L EM G+V + T+ T++ G+ GD+ A + +++ G PD
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ TY ++I K
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+ +T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ CK G++ + +LF E RG + + +TY TLI G + + A ++ +M+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ G K + +LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 2/245 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +F D+L +P + LM +++ R + + +ME + + ++ +
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ FC K A + + + P ++ LC E +V +A + + ++
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
C P+ +T+++ LC+EG+I EA L D E G P+ +TY T++ GMC+ + A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 415 RLWDDMVE-KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L M E + PNV Y+ +I CK G + + EM +KG FP+ +++ +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 474 LYESG 478
SG
Sbjct: 300 FCSSG 304
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P P + ++ +Q LD A +F+ S N T++++I A+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKR 410
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D LL E+ + + + T+I + L G A+ + + + + +
Sbjct: 411 IDDGMELLHEMTETGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 154 TLLNALVQNKRYDLVHLMFK---------NSRHKFK-VVPNVFTCNILIKALCKKDDVEG 203
TLL+ L N + MFK ++ H F V P+V T NILI L +
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A + +EMP G+VP+ +T+++++ G + ++ A ++F + + + P+ T+T L++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K GR+ D +++ EM G+ N +TY +I F K A ++ +M+ P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 324 SS 325
+
Sbjct: 650 DT 651
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 31/331 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY S+I + DA E + + C NL F T+I Y A R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATK---GCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + + + NTL++ N DL+ M + + P++ TC+
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-----LCPDIVTCDT 470
Query: 191 LIKALCKKDDVEGAIRVLDEM-----------PSMGMVPNLVTHTTILGGYVWRGDIENA 239
L+ LC ++ A+ + M P G+ P++ T+ ++ G + G A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ ++ RG VPD TY+ ++DG K RL +A ++ D M PN VT+ +I
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC---EEGKVEDACELWKRLLRKNC 356
+CK + + L +M +R V ++ I L+C + G + A ++++ ++
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAI---TYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
PD ++ L + ++ A + ++ +
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 219/391 (56%), Gaps = 13/391 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
Q+ D AL +F+ + F H+Y +Y ++++KLAR+R F+AVE+LL L QN I+C E
Sbjct: 101 QDPDDALSLFNQYQQM--GFKHDYPSYSALVYKLARSRNFEAVETLLDYL-QNINIRCRE 157
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFK 173
LFI +I++YG + PE AV+ F R+ FN R++ S NTLLN LV+N R+ D + + +
Sbjct: 158 TLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDR 217
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+++ F+ N + NI+IK K + + A +V +EM + P +VT +++G +
Sbjct: 218 STKMGFRR--NSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGK 275
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
GD++ A + D++ + P+A TY +LM+G LG+ +A K+M +M+ G +P + +
Sbjct: 276 GDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNF 335
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
GV++ + + +++ LL +M +R++ P +I+ LC+EG+ +A ++ +
Sbjct: 336 GVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQV 395
Query: 354 KNCMPDNAISSTIIHWLCK----EGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAE 409
C P+ A ++ C+ EG + K L G P L ++ L+ G+ ++ +
Sbjct: 396 GGCEPNAATYRMMVDGFCQVEDFEGGL---KVLSAMLMCGHCPRLESFCDLVVGLLKNGK 452
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ A + ++M ++ + ++ + L++ C
Sbjct: 453 IDGACFVLEEMEKRKMRFHLEAWEALVKDAC 483
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 191/399 (47%), Gaps = 8/399 (2%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTC 188
P+ A+ F + ++ + S + L+ L +++ ++ V + ++ + +F
Sbjct: 103 PDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIA 162
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K E A+ + MPS LV+ T+L V +A +F
Sbjct: 163 --LIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTK 220
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC-KGKKSG 307
G+ ++ ++ +++ G++ G A +V +EM D V+P VT+ +I C KG G
Sbjct: 221 MGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDG 280
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL+DM+Q+++ P++ +++ LC GK ++A ++ + + C P ++
Sbjct: 281 -AMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLM 339
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + G+I ++K L E +R P ++TYN LI +C+ EA ++ +M G E
Sbjct: 340 SDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCE 399
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGK 485
PN TY M++ GFC++ + + G+++L ML G P SF L+ GL ++G +G
Sbjct: 400 PNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFV 459
Query: 486 VVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLV 524
+ M ++W L+ D GAG L LV
Sbjct: 460 LEEMEKRKMRFHLEAWEALVKDACPG-DRGAGGLVRELV 497
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 232/450 (51%), Gaps = 17/450 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS--HNYDTYHSIIHKLARARA 93
+P+P + +L+S I + D+ + + G+ N HN+ TY +++ R
Sbjct: 76 RPFPSIIEFSKLLSAIAKMNKFDVVISL----GEQMQNLGIPHNHYTYSILLNCFCRRSQ 131
Query: 94 FD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
AV + +L P+I +L + Y R AV ++ + +
Sbjct: 132 LPLALAVLGKMMKLGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMVEMGYKPDTV 187
Query: 151 SLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ NTL++ L + NK + V L+ + + P++FT ++ LCK+ D++ A+ +L
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTVVNGLCKRGDIDLALSLLK 245
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + N+V + TI+ G +++A +F + +G PD TY L+ G
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +DA +++ +M + + PN VT+ +I+AF K K EA L D+M+QR P+
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I+ C ++++A +++ ++ K+C+PD +T+I CK ++ E +LF E +R
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G + + +TYNTLI G+ ++ + A +++ MV GV P++ TY++L+ G CK G ++
Sbjct: 426 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 485
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + E + PN +++++IEG+ ++G
Sbjct: 486 LVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 219/436 (50%), Gaps = 9/436 (2%)
Query: 80 TYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKT 136
T++++IH L +A +AV + + + C +LF TV+ G +LA+
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARG----CQPDLFTYGTVVNGLCKRGDIDLALSL 243
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++EK ++ +V NT+++ L + K D +F K + P+VFT N LI LC
Sbjct: 244 LKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNSLISCLC 302
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
A R+L +M + PN+VT +++ + G + A+++F +++ R P+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 362
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L++G+ RL +A ++ M P+ VTY +I+ FCK K+ E L +M
Sbjct: 363 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREM 422
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
QR V ++ +I L + G + A +++K+++ PD S ++ LCK GK+
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 482
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +F+ ++ + P++ TYN +I GMC++ ++ + L+ + KGV+PNV Y +
Sbjct: 483 EKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 542
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I GFC+ G +E + EM + G P+ ++ LI G++ +++ + G
Sbjct: 543 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 602
Query: 496 VESDSWNFLLTRIVSD 511
V S ++ ++ D
Sbjct: 603 VGDASTISMVINMLHD 618
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 196/398 (49%), Gaps = 37/398 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ + LL+A+ + ++D+V + + N +T +IL+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGIPHNHYTYSILL 123
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G P++VT +++L GY I A + +++ G+
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYK 183
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD T+ L+ G + ++AV ++D M G +P+ TYG ++ CK A +L
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 243
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC- 371
L M + K + + +ID LC+ ++DA +L+ ++ K PD +++I LC
Sbjct: 244 LKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCN 303
Query: 372 ----------------------------------KEGKIWEAKKLFDEFERGSI-PSLLT 396
KEGK+ EA+KLFDE + SI P+++T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 363
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN+LI G C L EA +++ MV K P+V TYN LI+GFCK +EG+ + EM
Sbjct: 364 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMS 423
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G N +++ LI+GL+++G+ K+ + G
Sbjct: 424 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 187/395 (47%), Gaps = 11/395 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V+ + ++ ++DLAL + K N Y++II L + + D L +++
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEK--GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMET 284
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P++ N I+ + NYG R A + + + + +V + N+L++A +
Sbjct: 285 KGIKPDV-FTYNSLISCLCNYG---RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEG 340
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ +F + + PN+ T N LI C D ++ A ++ M S +P++VT+
Sbjct: 341 KLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T++ G+ +E +F ++ RG V + TY L+ G + G A K+ +M
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
+GV P+ +TY ++++ CK K +A + + + + K P+ +I+ +C+ GKVED
Sbjct: 460 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+L+ L K P+ I +T+I C++G EA LF E E G++P YNTLI
Sbjct: 520 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 579
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+ + L +M G + T +M+I
Sbjct: 580 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFL 138
TY+++I +A+ + L E+ Q + G + + T+I+ AG ++A K F
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYNTLIQGLFQAGDCDMAQKIFK 455
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++ V + + + LL+ L + + + ++F+ K K+ PN++T NI+I+ +CK
Sbjct: 456 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPNIYTYNIMIEGMCKA 514
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
VE + + G+ PN++ +TT++ G+ +G E A +F ++ + G +PD+ Y
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 574
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
L+ ++ G + +++ EM G + T ++I G+
Sbjct: 575 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 620
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 373 EGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
E K+ +A LF E + PS++ ++ L++ + + + L + M G+ N +T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
Y++L+ FC+ + +L +M+ G P+ + S L+ G
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 160
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 196/400 (49%), Gaps = 6/400 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y++++ A DA L+ E+ P+ + T+IR GR A+
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVEPD----AYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V + LL A + Y + R K P++ T N+++ +C++
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEG 116
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ AI L +PS G PN V++ +L G E+A+ + G++ +G P+ T+
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ + G + A++V++++ G PN ++Y ++ AFCK KK +A LD M+ R
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC G+V+ A EL +L K C P +T+I L K GK EA
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E +G P ++TY+T+ AG+C + +A R + + + G+ PN YN +I G
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK I + M+ GC PN++++++LIEGL G
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 396
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 162/307 (52%), Gaps = 4/307 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N ++ C ++ A R++ EMP + P+ T+ T++ G RG NA V ++L
Sbjct: 4 NAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R VPD TYT+L++ K A+K++DEM D G P+ VTY V++ C+ + +
Sbjct: 61 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L ++ P++ V+ LC + EDA EL + +K C P+ + +I
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+LC++G + A ++ ++ + G P+ L+YN L+ C+ ++ +A D MV +G P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
++ +YN L+ C+ G + +L ++ DKGC P S++ +I+GL ++G E +++
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300
Query: 488 SMATASG 494
+ + G
Sbjct: 301 NEMVSKG 307
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKT 136
TY+ +++ + + R DA+E L K P C N + V++ A R E A +
Sbjct: 104 TYNVVVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 159
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKA 194
+ + +V + N L++ L R LV L K+ PN + N L+ A
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLC---RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 216
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK+ ++ A+ LD M S G P++V++ T+L G+++ A + + D+G P
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 276
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+Y ++DG K G+ +A+++++EM G++P+ +TY + C+ + +A
Sbjct: 277 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 336
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P++ L +I LC+ + A +L+ ++ CMP+ + + +I L EG
Sbjct: 337 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 396
Query: 375 KIWEAKKLFDEF 386
I EA+ L DE
Sbjct: 397 LIKEARDLLDEL 408
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 156/314 (49%), Gaps = 16/314 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFS--HNYDTYHSIIHKLARARAFDAVESLLTEL 104
+V+ I ++ +D A++ K P++ N +Y+ ++ L A ++ E L+ E+
Sbjct: 108 VVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 163
Query: 105 KQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
Q P N+ I+ + GL E A++ +I K+ + S N LL+A +
Sbjct: 164 GQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 220
Query: 163 KRYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
K+ D + L SR + P++ + N L+ ALC+ +V+ A+ +L ++ G P L
Sbjct: 221 KKMDKAMAFLDLMVSRGCY---PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 277
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+++ T++ G G + A + +++ +G PD TY+ + G + R+ DA++ +
Sbjct: 278 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 337
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
++D G+ PN V Y +I CK +++ A +L M+ +P+ + +I+ L EG
Sbjct: 338 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 397
Query: 341 VEDACELWKRLLRK 354
+++A +L L +
Sbjct: 398 IKEARDLLDELCSR 411
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ YN ++AG C + +L A RL + E VEP+ +TYN LI+G C G + +L+E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 455 MLDKGCFPNKTSFSLLIEG 473
ML + C P+ ++++L+E
Sbjct: 58 MLRRRCVPDVVTYTILLEA 76
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 190/359 (52%), Gaps = 2/359 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G + A++ R + VQ V NT+++ + ++K + ++ K
Sbjct: 303 TLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSK 362
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
++ P+VFT N LI C ++ AI + ++M S ++P++ T + ++ G+ G+I+
Sbjct: 363 -RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE 421
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK V ++ + PD TY+ LMDGY + + A + + M GV N +Y +MI
Sbjct: 422 AKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMIN 481
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK K EA L +M ++ P +ID LC+ G++ A EL + + P
Sbjct: 482 GFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQP 541
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D ++I+ LCK+ + +A L + + +G P + TY L+ G+C+S +L +A +++
Sbjct: 542 DIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVF 601
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+D++ KG +V+ Y ++IQGFC G E + +L +M + GC P+ ++ ++I L+E
Sbjct: 602 EDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFE 660
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 162/315 (51%), Gaps = 4/315 (1%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD-EMPSMGMVPNLVTHT 224
D + N H FK++ IK C E +I ++ G P+ +T T
Sbjct: 210 DFLQSRLFNVLHSFKILIEYH--KTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLT 267
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T + G+ +G I A ++ G+ D +Y L++G K+G A++++ +
Sbjct: 268 TFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGK 327
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
V+P+ V Y +I+ CK K +A +L + + ++ P +I C GK++DA
Sbjct: 328 LVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDA 387
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAG 403
+L+ ++ KN +PD S ++ CK+G I EAK + + SI P ++TY++L+ G
Sbjct: 388 IDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDG 447
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C E+ +A +++ M +GV NV +YN++I GFCKI E +++ +EM K FP+
Sbjct: 448 YCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPD 507
Query: 464 KTSFSLLIEGLYESG 478
++S LI+GL +SG
Sbjct: 508 VITYSSLIDGLCKSG 522
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 144/280 (51%), Gaps = 1/280 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+V+T +IL+ CK +++ A VL M + P++VT+++++ GY ++ A+
Sbjct: 399 IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAE 458
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + RG + +Y ++++G+ K+ + +A+K+ EM + P+ +TY +I+
Sbjct: 459 SIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGL 518
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + A L+D+M R P ++D LC++ V+ A L +L + PD
Sbjct: 519 CKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDM 578
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ ++ LC+ GK+ +A+K+F D +G + Y +I G C+ EA L
Sbjct: 579 NTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSK 638
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
M E G P+ TY ++I + ++L EM+ +G
Sbjct: 639 MEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 164/380 (43%), Gaps = 68/380 (17%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP-NVFTCNIL 191
AV F R+ + N +L +LV++K Y V + + + +FK + N CNIL
Sbjct: 94 AVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTV--LSLSQKMEFKGIKLNFLNCNIL 151
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV--------- 242
I + C+ + A VL V IL R ++E+ KR+
Sbjct: 152 INSFCQLGLIPFAFSVLTRG---------VYWIEILKDCFDRKNLEDFKRLCWIVLILWD 202
Query: 243 -----FGDILDRGWVPDATTYTVLMD---GYIKLGRLTDAVKVMDEME-----DNGVEPN 289
D L ++ +L++ +IK L + ++ E NG EP+
Sbjct: 203 FKRLFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPD 262
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+T I+ FC + +A + D ++ + +I+ LC+ G+ + A EL
Sbjct: 263 TITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL-- 320
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAE 409
LR+N +GK+ + P ++ YNT+I GMC+
Sbjct: 321 --LRRN-----------------DGKLVQ-------------PDVVMYNTIIDGMCKDKH 348
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ +A L+ + V K + P+VFTYN LI GFC +G K+ I + +M K P+ +FS+
Sbjct: 349 VNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSI 408
Query: 470 LIEGLYESGNEGEVGKVVSM 489
L++G + GN E V++M
Sbjct: 409 LVDGFCKDGNIKEAKNVLAM 428
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 7/266 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +++ Y L A F + V +V+S N ++N + K D +FK
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
HK ++ P+V T + LI LCK + A+ ++DEM G P+++T+ +IL + +
Sbjct: 501 HK-QIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A + + +G PD TYT+L+ G + G+L DA KV +++ G + Y VM
Sbjct: 560 DKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVM 619
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN- 355
I+ FC EA LL M + +P + +I L E+ + + A +L + ++ +
Sbjct: 620 IQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Query: 356 --CMPDNAISSTIIH--WLCKEGKIW 377
+ D+ ++S ++ W C +W
Sbjct: 680 LVALTDDLVASILVRRTW-CARLALW 704
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQI---FHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
+P + L+ + + + AL++ HY G+ P+ TY+SI+ L +
Sbjct: 505 FPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQ-QPDII----TYNSILDALCKKHHV 559
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF--LRIEKFNVQRSVRSL 152
D +LLT+LK I+ N + +++ +G+ E A K F L ++ +N+ V +
Sbjct: 560 DKAITLLTKLK-GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD--VYAY 616
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
++ +D L + + +P+ T I+I +L +KD+ + A ++L EM
Sbjct: 617 TVMIQGFCDKGLFDEA-LALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675
Query: 213 SMGMVPNL 220
G++ L
Sbjct: 676 MRGLLVAL 683
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 242/501 (48%), Gaps = 38/501 (7%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
++ P +L ++ N+ ++++F + G + H++D Y +I KL F ++
Sbjct: 74 HKITPFQLYKLLELPLNVSTSMELFSWTGS-QNGYRHSFDVYQVLIGKLGANGEFKTIDR 132
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNA 158
LL ++K + I E+LFI+++R+Y AG P + L + ++ + + +S N +L
Sbjct: 133 LLIQMK-DEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
LV + + +F + + K+ P +FT +++KA C ++++ A+ +L +M G VP
Sbjct: 192 LVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N V + T++ + A ++ ++ G VPDA T+ ++ G K R+ +A K++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI------ 332
+ M G P+++TYG ++ CK + A++L + + + V + L +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 333 -------DLLCEEGKVEDACE-------LWKRLL------------RKNCMPDNAISSTI 366
D++ G V D C WK L K C P+ + +
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ CK GKI EA + +E G P+ + +N LI+ C+ + EA ++ +M KG
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+P+V+T+N LI G C++ K + +L +M+ +G N +++ LI G E K
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 486 VVSMATASGS-VESDSWNFLL 505
+V+ GS ++ ++N L+
Sbjct: 551 LVNEMVFQGSPLDEITYNSLI 571
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 202/404 (50%), Gaps = 8/404 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++IH L++ + LL E+ + E F VI R A K
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET-FNDVILGLCKFDRINEAAKM 309
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ + L+N L + R D +F P + N LI
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFV 364
Query: 197 KKDDVEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
++ A VL +M S G+VP++ T+ +++ GY G + A V D+ ++G P+
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+YT+L+DG+ KLG++ +A V++EM +G++PN V + +I AFCK + EA + +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M ++ P +I LCE +++ A L + ++ + + + +T+I+ + G+
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
I EA+KL +E +GS +TYN+LI G+C + E+ +A L++ M+ G P+ + N+
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI G C+ G +E + +EM+ +G P+ +F+ LI GL +G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 192/384 (50%), Gaps = 6/384 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR + A F RI K + NTL++ V + R D + + + +VP+V T
Sbjct: 336 GRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI K+ V A+ VL +M + G PN+ ++T ++ G+ G I+ A V ++
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P+ + L+ + K R+ +AV++ EM G +P+ T+ +I C+ +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL DM+ V ++ +I+ G++++A +L ++ + D +++I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 368 HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LC+ G++ +A+ LF++ R G PS ++ N LI G+C S + EA +MV +G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P++ T+N LI G C+ G ++G+ + ++ +G P+ +F+ L+ L + G + +
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 487 VSMATASGSVESD-SWNFLLTRIV 509
+ G V + +W+ LL I+
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSII 715
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 194/384 (50%), Gaps = 13/384 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++++IH D +++L+++ + I + ++I Y G LA++ +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ +V S L++ + + D + + N + PN N LI A CK+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL-NEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A+ + EMP G P++ T +++ G +I++A + D++ G V + TY
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L++ +++ G + +A K+++EM G +E+TY +I+ C+ + +AR+L + ML+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+ PS+ C +I+ LC G VE+A E K ++ + PD +++I+ LC+ G+I +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+F + + G P +T+NTL++ +C+ + +A L D+ +E G PN T+++L+Q
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Query: 440 CKIGNAKEGIRILEEMLDKGCFPN 463
I +E LD+ F N
Sbjct: 715 -----------IPQETLDRRRFYN 727
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 185/325 (56%), Gaps = 2/325 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN +T N +I LCK V A +VL M + + P+ V +TT++ G+ G++ ++
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ + VPD TYT ++ G + G++ +A K+ EM G++P+EVTY +I+ +CK
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA +L + M+++ P+ ++D LC+ G+V+ A EL + K P+
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I+ LCK G I +A KL +E + G P +TY T++ C+ E+ +A L M+
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+KG++P + T+N+L+ GFC G ++G R+++ MLDKG PN T+F+ L++ N
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619
Query: 482 EVGKVVSMATASGSV-ESDSWNFLL 505
++ A G V +++++N L+
Sbjct: 620 ATIEIYKGMHAQGVVPDTNTYNILI 644
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 173/318 (54%), Gaps = 2/318 (0%)
Query: 179 FKVVPNVFTCNILIKALCKK-DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V+ +V +CN+ + L D + A RV E +G+ N V++ IL G ++
Sbjct: 210 YGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVK 269
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + + RG VPD +Y+V++DGY ++ +L +K+M+E++ G++PN+ TY +I
Sbjct: 270 EAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSII 329
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + EA +L M ++ P + + +I + G V +L+ + RK +
Sbjct: 330 SFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIV 389
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD +++IH LC+ GK+ EA+KLF E +G P +TY LI G C++ E+ EA L
Sbjct: 390 PDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSL 449
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ MVEKG+ PNV TY L+ G CK G +L EM +KG PN +++ LI GL +
Sbjct: 450 HNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCK 509
Query: 477 SGNEGEVGKVVSMATASG 494
GN + K++ +G
Sbjct: 510 VGNIEQAVKLMEEMDLAG 527
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 221/437 (50%), Gaps = 16/437 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELK---QNPEIKCGENLFITVIRNYGLAGRPELA 133
N +Y+ I+H L + SLL +++ P++ + ++ Y +
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVS----YSVIVDGYCQVEQLGKV 306
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY---DLVHLMFKNSRHKFKVVPNVFTCNI 190
+K +++ ++ + + N++++ L + R + V + KN R + P+
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR----IFPDNVVYTT 362
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI K +V ++ DEM +VP+ VT+T+++ G G + A+++F ++L +G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TYT L+DGY K G + +A + ++M + G+ PN VTY +++ CK + A
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL +M ++ P+ +I+ LC+ G +E A +L + + PD +TI+
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542
Query: 371 CKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK G++ +A +L ++G P+++T+N L+ G C S L + RL M++KG+ PN
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
T+N L++ +C N + I I + M +G P+ ++++LI+G ++ N E +
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662
Query: 490 ATASG-SVESDSWNFLL 505
G S+ + S+N L+
Sbjct: 663 MVEKGFSLTAASYNSLI 679
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 200/404 (49%), Gaps = 3/404 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+SII L + E +L +K N I ++ T+I +G +G + K
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVLRVMK-NQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +++ + + ++++ L Q + +F K + P+ T LI C
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK-GLKPDEVTYTALIDGYC 438
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +++ A + ++M G+ PN+VT+T ++ G G+++ A + ++ ++G P+
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L++G K+G + AVK+M+EM+ G P+ +TY +++A+CK + +A LL M
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L + P+ +++ C G +ED L K +L K MP+ ++++ C +
Sbjct: 559 LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+++ +G +P TYN LI G C++ + EA L +MVEKG +YN L
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSL 678
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I+GF K +E ++ EEM G K + + ++ YE GN
Sbjct: 679 IKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGN 722
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 193/434 (44%), Gaps = 50/434 (11%)
Query: 40 QRLYPKR-----LVSMIFRQQNLDLALQIFHYAG--KFHPNFSHNYDTYHSIIHKLARAR 92
QR++P L+S + N+ + ++F K P+F TY S+IH L +A
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFV----TYTSMIHGLCQAG 406
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
L +E+ + +K E + +I Y AG + A
Sbjct: 407 KVVEARKLFSEM-LSKGLKPDEVTYTALIDGYCKAGEMKEAF------------------ 447
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+L N +V+ + PNV T L+ LCK +V+ A +L EM
Sbjct: 448 -SLHNQMVEKG-----------------LTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G+ PN+ T+ ++ G G+IE A ++ ++ G+ PD TYT +MD Y K+G +
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMA 549
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A +++ M D G++P VT+ V++ FC + L+ ML + +P++ ++
Sbjct: 550 KAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLM 609
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
C + E++K + + +PD + +I CK + EA L E E+G
Sbjct: 610 KQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFS 669
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ +YN+LI G + + EA +L+++M G Y++ + + GN + + +
Sbjct: 670 LTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729
Query: 452 LEEMLDKGCFPNKT 465
+E ++K C KT
Sbjct: 730 CDEAIEK-CLVKKT 742
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 204/412 (49%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY + + + + + +LL ++++ IK ++ +I GR + F+
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ + ++ + N ++ + R+ + + + K+ PNV T N LI A K+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEG 337
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+ +++ G+ + ++ A+ +F + +G PD T+T
Sbjct: 338 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM G+ N VTY +I FC A +L M+
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++ M K P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+N LI G+CK G +G+ + EM +G + + LI G + GN
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 206/404 (50%), Gaps = 16/404 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ ++ + R D V SL ++++ +I+C F +I+ + + A+ TF ++
Sbjct: 84 FNKLMGAVVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142
Query: 141 EKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
K + V + TLL+ L + R DL H + + P+V T L+ LC
Sbjct: 143 TKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR---------PDVLTFTTLMNGLC 193
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDA 255
++ V A+ +LD M G+ P+ +T+ T + G GD +A + + + + P+
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y+ ++DG K GR +D+ + EM+D G+ PN VTY MI FC + A+ LL +
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML+RK P+ +I+ +EGK +A EL+ +L + +P+ +++I CK+ +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A+ +F +G P + T+ TLI G C + + + L +M +G+ N TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI GFC +G+ + + ++M+ G P+ + + L++GL ++G
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 20/394 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+ +I + + A + LL E+ K +P + L ++ EL
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R + + + N++++ + R D MF K P+VFT LI
Sbjct: 347 DEMLPR----GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLID 401
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C ++ + +L EMP G+V N VT+ T++ G+ GD+ A + ++ G P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCK 302
D T L+DG G+L DA+++ M+ NGVEP+ +TY ++I
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ CK G++ + +LF E RG + + Y TLI G + + A ++ +M+
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
GV P+ T ++ GF + + +LE++
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 161/359 (44%), Gaps = 69/359 (19%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV N L+ A+V+ +R DLV +++ K ++ ++++ ILIK C + A+
Sbjct: 80 SVIDFNKLMGAVVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY--------- 258
FG + G PD T+
Sbjct: 139 -----------------------------------FGKLTKLGLHPDVVTFTTLLHGLCL 163
Query: 259 ----------------------TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
T LM+G + GR+ +AV ++D M +NG++P+++TYG
Sbjct: 164 DHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTF 223
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ CK + A NLL M + ++ P+ + +ID LC++G+ D+ L+ + K
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
P+ + +I C G+ A++L E ER P+++TYN LI + + EA
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+D+M+ +G+ PN TYN +I GFCK + M KGC P+ +F+ LI+G
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 22/368 (5%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N TY+++I+ + F L E+ I + ++I + R + A
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP-NTITYNSMIDGFCKQDRLDAAE 378
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNI 190
F + V + TL++ KR D L+H M + +V N T N
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG-----LVANTVTYNT 433
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI---- 246
LI C D+ A+ + +M S G+ P++VT T+L G G +++A +F +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 247 --LD-----RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
LD G PD TY +L+ G I G+ +A ++ +EM G+ P+ +TY MI+
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK + EA + M + + P+ +I+ C+ G+V+D EL+ + R+ + D
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
I T+I+ K G I A +F E G P +T ++ G EL A + +
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673
Query: 419 DMVEKGVE 426
D+ +E
Sbjct: 674 DLQRYQLE 681
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E AI + +M +P+++ ++G V + ++ + + D ++T+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + +L A+ ++ G+ P+ VT+ ++ C + EA +L + +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P +++ LC EG+V +A L R++ PD T + +CK G A
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 381 KLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L + E S P+++ Y+ +I G+C+ +++ L+ +M +KG+ PN+ TYN +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
FC G R+L+EML++ PN +++ LI + G E ++
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 224/458 (48%), Gaps = 30/458 (6%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ L PKR++ ++ ++N AL IF +F P +SH +H I+ +L FD
Sbjct: 5 PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRF-PGYSHTPYVFHHILKRL-----FD--- 55
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLN 157
P++ V Y P+ A+ F R+ E F Q +RS N+LLN
Sbjct: 56 ---------PKL---------VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN 97
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
AL+++ ++D F + PN+ T NILIK C+K + A +L+ M G
Sbjct: 98 ALIESNKWDEAESFFL-YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFS 156
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ ++ T++ G + +A ++F ++ +RG PD Y +L+DG+ K G + +A ++
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 216
Query: 278 MDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ + + V PN +Y VMI CK K E+ + M + + +I LC
Sbjct: 217 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 276
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLT 396
G ++ A ++K + PD + +T+++ + G+I E +L+ E+ ++++
Sbjct: 277 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS 336
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN LI G+ E+A++ EA +W+ + EK + TY +L+ G CK G + + ILEE
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 396
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ + ++S +I GL G EV V+ T G
Sbjct: 397 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 221/449 (49%), Gaps = 10/449 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++IH L + D + E+ +N P++ ++ T++ Y AGR E ++
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV----VYNTMLNGYLRAGRIEECLEL 322
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ +EK R+V S N L+ L +N + D +++ K + T +L+ LC
Sbjct: 323 WKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLC 380
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+ +L+E + + +++++ G G ++ V + G P+
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPY 440
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+++G+++ +L DA++ M G P VTY +I K ++ EA L+ +M
Sbjct: 441 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
LQ+ + P+ +++ LC+ K++ A LW + L K PD + + IIH LC GK+
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 560
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +L+ E +R +P+L+T+NTL+ G + + A ++WD +++ G++P++ +YN+
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNIT 620
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
++G C + + L + +D+G P ++++L++G E V + +
Sbjct: 621 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASMKGNPG 680
Query: 496 VESDSWNFLLTRIVSDLDSGAGALDELLV 524
++ + F+ ++ S LD L LV
Sbjct: 681 MQMRYFGFVCDKLSSPLDVQQPVLCLFLV 709
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 226/473 (47%), Gaps = 54/473 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + R++ D A ++ ++ + FS + +Y ++I+ LA+ L E+ +
Sbjct: 130 LIKISCRKKQFDKAKELLNWM--WGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE 187
Query: 107 ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQN 162
P++ C + +I + G A + + R+ K +V ++ S N ++N L +
Sbjct: 188 RGVTPDVAC----YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 243
Query: 163 KRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
++D + H M KN R + +++T + LI LC +++GA RV EM G+ P
Sbjct: 244 GKFDESFEIWHRMKKNERGQ-----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 298
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFG-------------DILDRG-------------W- 251
++V + T+L GY+ G IE ++ +IL RG W
Sbjct: 299 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWE 358
Query: 252 -------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D+ TY VL+ G K G L A+ +++E E+ + + Y MI C+
Sbjct: 359 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 418
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ E +LD M + P+ +C VI+ K+EDA + ++ K C P +
Sbjct: 419 RLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 478
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T+I+ L K + EA L E ++G P+++TY+ L+ G+C+ +L A LW +EK
Sbjct: 479 TLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 538
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
G +P+V +N++I G C G ++ +++ EM + C PN + + L+EG Y+
Sbjct: 539 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYK 591
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 137/292 (46%), Gaps = 9/292 (3%)
Query: 245 DILDR-----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
DI R G P +Y L++ I+ + +A E G+ PN TY ++I+
Sbjct: 74 DIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKI 133
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K+ +A+ LL+ M + + P +I+ L + G + DA +L+ + + PD
Sbjct: 134 SCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPD 193
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLW 417
A + +I K+G I A ++++ +G P++ +YN +I G+C+ + E+ +W
Sbjct: 194 VACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIW 253
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M + +++TY+ LI G C GN R+ +EM + G P+ ++ ++ G +
Sbjct: 254 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 313
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G E ++ + G S+N L+ + + +D + L K+C
Sbjct: 314 GRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDC 365
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 235/482 (48%), Gaps = 57/482 (11%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL----KQN-------- 107
+L F A K NF N +++ ++H L+RAR +D S L EL K N
Sbjct: 77 SLHFFKLASK-QSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWN 135
Query: 108 ------PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ K +F +++ Y G + A+ F + K S+RS N LL++LV+
Sbjct: 136 ELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
L++ + ++ +VP+VFTC+I++ A CK V A+ + EM +G N+V
Sbjct: 196 KGESSNAILVYDHI-NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVV 254
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ +++ G V GD+E A+ V + +RG + + T T+L+ GY + +L +A KV+ EM
Sbjct: 255 TYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314
Query: 282 E-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
E G+ +E YGV+I+ +C+ K +A L D+ML + +C +I+ C+ G+
Sbjct: 315 ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQ 374
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNT 399
V +A L R++ + P++ ST++ C+EG + +A +++E R I S ++T+N+
Sbjct: 375 VSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNS 434
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPN------------------------------- 428
L+ G+C +A +W M+++GV P+
Sbjct: 435 LLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARG 494
Query: 429 ----VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ +N +I GFCK+ E M + G P+ ++ LI+G + GN E
Sbjct: 495 YGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAF 554
Query: 485 KV 486
KV
Sbjct: 555 KV 556
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 171/311 (54%), Gaps = 1/311 (0%)
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K K ++P++ N LI L K + +L EM G+ PN+VT+ T++ G+
Sbjct: 557 KEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCD 616
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G ++ A + D++++G+ P+ + ++ +LGR+ +A ++ +M + V +
Sbjct: 617 EGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGY 676
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ + +A S + + LD+ + +P+S + I LC+ GKV+DA +++ LL
Sbjct: 677 FDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLL 736
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELT 411
+ PDN T+IH G + +A L DE +RG P+++TYN LI G+C+S L
Sbjct: 737 LRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLD 796
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A +L+D + KG+ PNV +YN+LI G+CK GN +E + + +ML +G P+ ++S LI
Sbjct: 797 RAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALI 856
Query: 472 EGLYESGNEGE 482
G + G+ G+
Sbjct: 857 YGFCKQGDMGK 867
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 158/299 (52%), Gaps = 1/299 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+V + + +LI C+ ++ A+R+ DEM ++G+ NL ++ GY G + A+
Sbjct: 320 MVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAE 379
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R+ ++D P++ +Y+ LMDG+ + G +T A+ V +EM G++ N VT+ +++
Sbjct: 380 RLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGL 439
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ +A ++ ML+R P C ++DLL + G+ A LW +L +
Sbjct: 440 CRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRST 499
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I+ CK K+ EA++ F+ E G P +TY TLI G C+ + EA ++ +
Sbjct: 500 YAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEK 559
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M ++ + P++ YN LI G K +E + +L EM KG PN ++ LI G + G
Sbjct: 560 MEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEG 618
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 197/440 (44%), Gaps = 78/440 (17%)
Query: 115 NLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV--HL 170
NLFI +I Y G+ A + +R+ ++++ S +TL++ R LV +
Sbjct: 358 NLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFC---REGLVTKAI 414
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
N + + NV T N L+K LC+ E A+ V M G+ P+ V++ T+L
Sbjct: 415 SVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G+ A ++ DIL RG+ + +++G+ K+ ++ +A + + M++ G EP+
Sbjct: 475 FKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDG 534
Query: 291 VTYGVMIEAFC-----------------------------------KGKKSGEARNLLDD 315
VTY +I+ +C K KK+ E +LL +
Sbjct: 535 VTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSE 594
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + P+ +I C+EG+++ A + ++ K P+ I S I+ L + G+
Sbjct: 595 MCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGR 654
Query: 376 IWEAKKL---------------FDEFERG---------------------SIPSLLTYNT 399
I EA L FD + S+P+ + YN
Sbjct: 655 IDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNI 714
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
IAG+C+S ++ +A +++ ++ +G P+ FTY LI G+ GN + + +EML +G
Sbjct: 715 AIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRG 774
Query: 460 CFPNKTSFSLLIEGLYESGN 479
PN +++ LI GL +SGN
Sbjct: 775 LAPNIITYNALINGLCKSGN 794
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 161/350 (46%), Gaps = 17/350 (4%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
+ Y+S+I L +++ V LL+E+ +P + + T+I + GR + A
Sbjct: 570 ELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVT----YGTLIAGWCDEGRLDKAFT 625
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + + +V + ++++L + R D +++ + V +VF + L
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK-----MVNLDVFLDHGYFDRL 680
Query: 196 CKKDD----VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
K DD + LDE +PN V + + G G +++AK++F +L RG+
Sbjct: 681 HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGF 740
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY L+ GY G + DA + DEM G+ PN +TY +I CK A+
Sbjct: 741 SPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQK 800
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L D + + P+ +ID C+ G +A +L ++L++ P S +I+ C
Sbjct: 801 LFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFC 860
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
K+G + +A L DE E + ++ + L+ G + E+ + +L + M
Sbjct: 861 KQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 171/385 (44%), Gaps = 29/385 (7%)
Query: 129 RPEL--------AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK 180
RPEL + + ++ N Q S L+++L L N L + + F+
Sbjct: 32 RPELIDRISRLLVLGRYHALKDLNFQFSDYILDSVLLKLKFNPIASLHFFKLASKQSNFR 91
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
PNV + L+ L + + L+E+ + P+ +++++ VW +
Sbjct: 92 --PNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSLV---VWNELV---- 138
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RVF D + P T + +++ Y + G + +A+ V D M G P+ + ++ +
Sbjct: 139 RVFEDF---KFSP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSL 193
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ +S A + D + + VP C +++ C++G V A + K + +
Sbjct: 194 VRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNV 253
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++I G + A+ + ERG + + +T LI G C +L EA ++ +
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLRE 313
Query: 420 M-VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M +G+ + + Y +LI G+C++ + +R+ +EML+ G N + LI G ++G
Sbjct: 314 MERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNG 373
Query: 479 NEGEVGKVVSMATASGSVESDSWNF 503
E +++ M +E +S+++
Sbjct: 374 QVSEAERLL-MRMVDWDLEPESYSY 397
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 224/453 (49%), Gaps = 23/453 (5%)
Query: 43 YPKRLVSMIFR--QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+ L+ ++ R + N D +L+ F A K P F + +Y I+H L+RAR + V
Sbjct: 96 FSNELMDLVLRNLRLNPDASLEFFKLASK-QPKFRPDVSSYCKIVHILSRARMYKEVRVY 154
Query: 101 LTEL----KQN--------------PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK 142
L EL K N E +F +++ + G + A+ F + K
Sbjct: 155 LNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGK 214
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
S+RS N+LL+ LVQN L+ ++P++F+ I++ A CK+ V+
Sbjct: 215 CGRVPSLRSCNSLLSNLVQNGE-AFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVD 273
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A + EM PN+VT+ +++ GYV GD+ AK+V + ++G ++ TYT+L+
Sbjct: 274 EAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLI 333
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
GY K G++ A K++ M + + +E YGV+I A+C + +A + D ML+
Sbjct: 334 KGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLK 393
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
++ +C +I+ C+ G V A E+ + N PD+ +T++ CK+ +A KL
Sbjct: 394 MNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKL 453
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
DE +G +++TYNTL+ + + A +W+ M ++GV PN TY L+ F K
Sbjct: 454 CDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFK 513
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+G + I ++ L KG + T ++ +I G
Sbjct: 514 VGTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 183/415 (44%), Gaps = 9/415 (2%)
Query: 77 NYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+S+I L V +L++E K PE + +I+ Y G+ E A
Sbjct: 290 NVVTYNSLIDGYVSLGDVCGAKKVLALMSE-KGIPE---NSRTYTLLIKGYCKRGQMEQA 345
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K + + N+ L++A R D L +++ K + N CN LI
Sbjct: 346 EKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDA-LRIRDAMLKVGLKMNTVICNSLIN 404
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK V A VL M + P+ + T+L G+ + D A ++ ++ ++G
Sbjct: 405 GYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNF 464
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY L+ +G + A+ + + M GV PNEVTY +++AF K A +
Sbjct: 465 TVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIW 524
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D L + + S L +I C+ K+ A E++ ++ PD T+I CK
Sbjct: 525 KDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKV 584
Query: 374 GKIWEAKKLFDEFERGSIPSLL-TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + EA KL D ER I S YN+LI G+ S EL + L +M + + PNV TY
Sbjct: 585 GNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTY 644
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
LI G+C G + +M+DKG PN S ++ LY G E ++
Sbjct: 645 GSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 192/428 (44%), Gaps = 17/428 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ F+ D A+ I+ A F+ + Y+++I + +
Sbjct: 499 PNEVTYCTLLDAFFKVGTFDRAMMIWKDA--LSKGFTKSITLYNTMICGFCKMEKLVQAQ 556
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ ++K+ P+ E + T+I Y G A+K E+ + S N+L
Sbjct: 557 EIFLKMKELGFPPD----EITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSL 612
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ + +++ ++ + +++ ++ PNV T LI C K ++ A +M G
Sbjct: 613 ITGVFRSEELQKLNGLLAEMKNR-ELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKG 671
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ PN++ + I+ G I+ A + I D + L + R +
Sbjct: 672 IAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDL---RHLETQ 728
Query: 276 KVMDEMEDNGVE---PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
K++D + N + Y + I CK K + R +L D+L + + P + C +I
Sbjct: 729 KIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLI 788
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSI 391
GKV +A L ++ +P+ + + +I+ LCK G + A++LF++ R G
Sbjct: 789 HACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLS 848
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++TYNTLI G C+ TEA L D M E+G+ P+ TY+ LI G G +++ + +
Sbjct: 849 PTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGL 908
Query: 452 LEEMLDKG 459
L EM+ G
Sbjct: 909 LNEMMKAG 916
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 184/432 (42%), Gaps = 72/432 (16%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++I Y G A + + ++ +N++ NTLL+ + + + + + H
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF-IKAFKLCDEMHN 459
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V V T N L+K L VE A+ + + M G+ PN VT+ T+L + G +
Sbjct: 460 KGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDR 519
Query: 239 AKRVFGDILDRGWV-----------------------------------PDATTYTVLMD 263
A ++ D L +G+ PD TY L+D
Sbjct: 520 AMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K+G L +A+K+ D E +G+ + Y +I + ++ + LL +M R+ P
Sbjct: 580 GYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA---- 379
+ +I C++G ++ A + +++ K P+ I S I+ L + GKI EA
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699
Query: 380 ----------------------------KKLFDEFERG--SIP--SLLTYNTLIAGMCES 407
+K+ D F + SIP + + YN I G+C+S
Sbjct: 700 HQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKS 759
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ + R+ D++ KG P+ +TY LI +G E + ++M++ G PN +
Sbjct: 760 KNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVY 819
Query: 468 SLLIEGLYESGN 479
+ LI GL +SGN
Sbjct: 820 NALINGLCKSGN 831
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 161/309 (52%), Gaps = 8/309 (2%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N LI + + ++++ +L EM + + PN+VT+ +++ G+ +G ++ A + ++D
Sbjct: 610 NSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMID 669
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G P+ + ++ + G++ +A ++ ++ D ++P + +E + E
Sbjct: 670 KGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD--IDP-IAAHAHSVELPKSDLRHLE 726
Query: 309 ARNLLDDMLQRKY---VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ ++D ++ + ++ + I LC+ ++D + LL K PDN +
Sbjct: 727 TQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCS 786
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+IH GK+ EA L D+ G +P+++ YN LI G+C+S L A RL++ + KG
Sbjct: 787 LIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKG 846
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG-NEGEV 483
+ P V TYN LI G+CK G E + + ++M ++G P+ ++S LI GLY G +E V
Sbjct: 847 LSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSV 906
Query: 484 GKVVSMATA 492
G + M A
Sbjct: 907 GLLNEMMKA 915
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 3/197 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+ N NI I LCK +++ R+L ++ G P+ T+ +++ G + A
Sbjct: 743 ISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFC 802
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D+++ G VP+ Y L++G K G L A ++ +++ G+ P VTY +I+ +C
Sbjct: 803 LRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYC 862
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK---NCMP 358
KG ++ EA L D M + PSS +I L EGK E + L +++ + +
Sbjct: 863 KGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVM 922
Query: 359 DNAISSTIIHWLCKEGK 375
D ++ + W K+ +
Sbjct: 923 DPLVARAYVKWRDKQSE 939
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 366 IIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
I+ ++G A +FD + G +PSL + N+L++ + ++ E +A +++ M+ G
Sbjct: 192 ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ P++F+Y +++ +CK G E ++EM C PN +++ LI+G G+
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311
Query: 485 KVVSMATASGSVESDSWNFLLTR 507
KV+++ + G E+ LL +
Sbjct: 312 KVLALMSEKGIPENSRTYTLLIK 334
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R++ S + ++ + E+G + A ++ + + +P ++++ L + G+ ++
Sbjct: 180 REFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFK 239
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A ++++ G +P + +Y ++ C+ + EA +M EPNV TYN LI
Sbjct: 240 ALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLID 299
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G+ +G+ ++L M +KG N +++LLI+G + G + K++
Sbjct: 300 GYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLI 349
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 22/142 (15%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VPN+ N LI LCK +++ A R+ +++ G+ P +VT+ T++ GY G A
Sbjct: 812 LVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEAL 871
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ + + G P + TY+ L+ G G+ +V +++EM
Sbjct: 872 ELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM------------------- 912
Query: 301 CKGKKSGEARNLLDDMLQRKYV 322
K+G+ +++D ++ R YV
Sbjct: 913 ---MKAGKGSSVMDPLVARAYV 931
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 2/365 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S LL ++ + K Y V L F + P+V+T NILI
Sbjct: 96 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTV-LSLSTQMDSFGIPPDVYTLNILI 154
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + A VL ++ +G P+ T T++ G G I A +F + G+
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY LM+G K+G + A++++ M PN + Y +I++ CK ++ EA NL
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 274
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P +I LC + + L ++ MP+ + ST++ LCK
Sbjct: 275 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 334
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG I A + D +RG P ++TY L+ G C +E+ EA +++D MV KG PNV +
Sbjct: 335 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 394
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN+LI G+C+I + + +LE+M +G + +++ LI GL G +
Sbjct: 395 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 454
Query: 492 ASGSV 496
ASG +
Sbjct: 455 ASGQI 459
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 2/299 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G A++ + + N + +V + NT++++L ++++ +F K + P++F
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK-GISPDIF 288
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI ALC + + +L+EM + ++PN+V +T++ G I A V +
Sbjct: 289 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 348
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG PD TYT LMDG+ + +AVKV D M G PN +Y ++I +C+ ++
Sbjct: 349 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A LL+ M + + + +I LC G+++ A L+ ++ +PD +
Sbjct: 409 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 468
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+ +LCK + EA L E ++ + +L YN I GMC + EL A L+ ++ +G
Sbjct: 469 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 6/297 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P +T L+ K+ + + + +M+ G+ P+ T +
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC ++ G A ++L +L+ P + +I LC EGK+ +A L+ + + +
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD T+++ LCK G A +L ++ P+++ YNT+I +C+ ++TEA
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ +M+ KG+ P++FTYN LI C + K +L EM++ PN FS +++ L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTR----IVSDLDSGAGALDELLVKNC 527
+ G VV M G VE D + + S++D D ++ K C
Sbjct: 333 CKEGMIAIAHDVVDMMIKRG-VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+IH L + V +LL E+ N +I +F TV+ G +A
Sbjct: 289 TYNSLIHALCNLCEWKHVTTLLNEMV-NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDM 347
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K V+ V + L++ D +F HK VPNV + NILI C+
Sbjct: 348 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK-GCVPNVRSYNILINGYCQIQ 406
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A+ +L++M G++ + VT+ T++ G G +++A +F +++ G +PD TY
Sbjct: 407 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 466
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+L+D K L +A+ ++ +E + ++ + + Y + I+ C+ + AR+L ++
Sbjct: 467 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 194/385 (50%), Gaps = 3/385 (0%)
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
E+ Q V + N L+N LV K Y + + + K + PN F+ NILI++ +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEML-KAGIAPNTFSFNILIRSFARTRR 169
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYT 259
+ A+ + M P+L T ++ G E A VF +++ G+V PD +T
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ +K R+ +A +V +ME G P+ + Y MI+ K + EA +LD+ML +
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP+ +++ LC+ G +E A EL++ + P++ I +++IH K G++ EA
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LFDE E G P ++T+ +I G+C+S +A + +++M+ G +PNV TY +IQG
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
KIG RI++ M+ GCFP+ ++ L++G + G E +++ S +
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 499 DSWNFLLTRIVSDLDSGAGALDELL 523
L + + D S LD+L
Sbjct: 470 LQLYSSLVKGLCDGGSVENTLDDLF 494
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 17/410 (4%)
Query: 77 NYDTYHSIIHKLARAR-AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N +++ +I AR R A DAV E+ + K + F+ ++ AG E A +
Sbjct: 153 NTFSFNILIRSFARTRRADDAVTCF--EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE 210
Query: 136 TFLRIEKFNVQRSVRSLNT-LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F + R+L+T ++ L++ KR +F K P+ N +I
Sbjct: 211 VFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVF-GQMEKCGFPPDAIAYNTMIDG 269
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L K + A++VLD M + VP VT+ ++ G +E A+ +F + G+ P+
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPN 329
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+ YT L+ G+ K GR+ +A + DEM + G P+ +T+ VMI+ CK +A +
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M++ P+ +I L + G+V +A + K ++ C PD+ ++ CK G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449
Query: 375 KIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG------VEP 427
++ EA +L DE ++ S P+L Y++L+ G+C+ + DD+ E+ ++P
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENT---LDDLFEQSKAAAENLDP 506
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ +I G CK G E RI + M+ +GC P+ T++++LI GL S
Sbjct: 507 GLCCS--IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS 554
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 209/427 (48%), Gaps = 29/427 (6%)
Query: 77 NYDTYHSIIHKLAR----ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N TY +II L++ A AF ++ ++ + +I ++ + GR +
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT-----YICLLDGFCKLGRLDE 453
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNAL-----VQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
A + ++K + +++ ++L+ L V+N DL F+ S+ + +
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDL----FEQSKAAAENLDPGLC 509
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--IENAKRVFGD 245
C+I++ LCK ++ A R+ M S G P+ T+ ++ G + +E A + D
Sbjct: 510 CSIIV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G++PDA TYT L G K+G + AVK+++E G + V Y + C +
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A +L +M+++ P +A C +I+ L + K+EDAC+ + ++ K P A +
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 366 IIHWLCKEGKIWEAKKLFDEFE----RGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
++ LC G + EA F FE RG + S++ Y+ LI G C++ ++ A +L++DM
Sbjct: 689 LVQALCHAGNVDEA---FHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ +G P T L G + G ++ +L+EM G P+ +F+ +++GL +S
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDES 805
Query: 481 GEVGKVV 487
G++ K+V
Sbjct: 806 GKLLKLV 812
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 222/499 (44%), Gaps = 64/499 (12%)
Query: 47 LVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
LV+ + + L+ A ++F A F PN Y S+IH A++ SL E+
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSV----IYTSLIHGFAKSGRMKEACSLFDEM 356
Query: 105 KQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ P++ +I +G E A K+F + + + +V + T++ L +
Sbjct: 357 VEAGYRPDVI----THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Query: 162 NKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
R + +M H P+ T L+ CK ++ A ++LDE+ PNL
Sbjct: 413 IGRVANAFRIMKGMIAHG--CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470
Query: 221 VTHTTILGGYVWRGDIEN------------------------------------AKRVFG 244
+++++ G G +EN A R+F
Sbjct: 471 QLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQ 530
Query: 245 DILDRGWVPDATTYTVLMDGYIKL--GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ G PDATTY +L++G + R+ A ++ ++E G P+ VTY + CK
Sbjct: 531 RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCK 590
Query: 303 GKKSGEARNLLDDMLQRKY----VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ A +L++ R + V +ALC LC +G+V+ A L++ ++R+ P
Sbjct: 591 IGEVDRAVKMLEEASSRGWNADVVAYTALCTG----LCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D A II+ L K K+ +A K FDE +G P++ TY L+ +C + + EA +
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706
Query: 418 DDMVEKG-VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ M+ +G + +V Y+ LI GFCK +++ E+M+ +G P + + L +GL
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766
Query: 477 SGNEGEVGKVVSMATASGS 495
SG + +++ A GS
Sbjct: 767 SGKTEKAQELLQEMAAGGS 785
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 4/276 (1%)
Query: 183 PNVFTCNILIKALCK--KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
P+ T NILI LC+ ++ VE A +L ++ +G +P+ VT+T + G G+++ A
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ + RGW D YT L G G++ AV + EM G P+ Y +I
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL-RKNCMPD 359
KGKK +A D+M+ + P+ A ++ LC G V++A ++ +L R +
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGS 718
Query: 360 NAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
I +IH CK K+ A KLF D RG++P+ +T +L G+ S + +A L
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+M G P+ T+ ++ G K + + +++++E
Sbjct: 779 EMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + AV F + + + ++N L++ K+ + F K + P V T
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK-PTVAT 685
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMG-MVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
L++ALC +V+ A + M + G +V +++ + ++ G+ ++ A ++F D+
Sbjct: 686 YTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG VP A T L DG ++ G+ A +++ EM G P+ T+ +++ K +S
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDES 805
Query: 307 GEARNLLDD 315
G+ L+ +
Sbjct: 806 GKLLKLVQE 814
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 217/430 (50%), Gaps = 46/430 (10%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+ TVI + G + A T+ + + V + N+++ AL + +K ++++ M
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
KN V+P+ T N ++ C + AI L +M S G+ P++VT++ ++
Sbjct: 259 KNG-----VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G A+++F + RG P+ TTY L+ GY G L + ++D M NG+ P+
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ ++I A+ K K +A + M Q+ P++ VI +LC+ G+VEDA +++++
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 353 RKNCMPDNAISSTIIHWL-----------------------------------CKEGKIW 377
+ P N + +++IH L CKEG++
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 378 EAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E++KLF+ R G P+++TYNTLI G C + ++ EA +L MV G++PN TY+ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS- 495
G+CKI ++ + + +EM G P+ +++++++GL+++ ++ T SG+
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 496 VESDSWNFLL 505
+E ++N +L
Sbjct: 614 IELSTYNIIL 623
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 168/352 (47%), Gaps = 4/352 (1%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AGR +L + K + + LL L +KR + + +PNVF
Sbjct: 100 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVF 159
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ NIL+K LC ++ + A+ +L M G P++V++TT++ G+ GD + A +
Sbjct: 160 SYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++LDRG +PD TY ++ K + A++V++ M NGV P+ +TY ++ +C
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ EA L M P ++D LC+ G+ +A +++ + ++ P+
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T++ +G + E L D R I P ++ LI + ++ +A ++ M +
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+G+ PN TY +I CK G ++ + E+M+D+G P ++ LI GL
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 238/525 (45%), Gaps = 54/525 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-AV 97
P + +++ F++ + D A +H + TY+SII L +A+A D A+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEM--LDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E L T +K C + +++ Y +G+P+ A+ ++ V+ V + + L++
Sbjct: 252 EVLNTMVKNGVMPDC--MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 158 ALVQNKR---------------------------------------YDLVHLMFKNSRHK 178
L +N R + L+ LM +N H
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH- 368
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
P+ + +ILI A K+ V+ A+ V +M G+ PN VT+ ++G G +E+
Sbjct: 369 ----PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A F ++D G P Y L+ G + A +++ EM D G+ N + + +I+
Sbjct: 425 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ CK + E+ L + M++ P+ +I+ C GK+++A +L ++ P
Sbjct: 485 SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP 544
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
+ ST+I+ CK ++ +A LF E E + P ++TYN ++ G+ ++ A L+
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ E G + + TYN+++ G CK + +++ + + +F+++I+ L +
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 664
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDEL 522
G E K + +A +S + + W + R++++ G G L+EL
Sbjct: 665 GRNDE-AKDLFVAFSSNGLVPNYWTY---RLMAENIIGQGLLEEL 705
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 40/339 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
+V P++ T ILI K LC A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---GWVPDATTYTV 260
+ VL M +G +PN+ ++ +L G + A + + D G PD +YT
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++G+ K G A EM D G+ P+ VTY +I A CK + +A +L+ M++
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P ++ C G+ ++A K++ PD S ++ +LCK G+ EA+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K+FD +RG P + TY TL+ G L E L D MV G+ P+ + +++LI +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G + + + +M +G PN ++ +I L +SG
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY +L+ + GRL + + G + + + +++ C K++ +A +
Sbjct: 84 TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL--RKNCMPDNAIS-STII 367
+ L M + +P+ ++ LC+E + ++A EL + R P + +S +T+I
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ KEG +A + E +RG +P ++TYN++IA +C++ + +A + + MV+ GV
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ TYN ++ G+C G KE I L++M G P+ ++SLL++ L ++G E K+
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 487 VSMATASG 494
T G
Sbjct: 324 FDSMTKRG 331
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 144/300 (48%), Gaps = 2/300 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I + CK+ V + ++ + M +G+ PN++T+ T++ GY G ++ A ++
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G P+ TY+ L++GY K+ R+ DA+ + EME +GV P+ +TY ++++ +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+++ A+ L + + + ++ LC+ +DA ++++ L + +
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I L K G+ EAK LF F G +P+ TY + + L E +L+ M +
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G + N +++ + G L M+D+ F + S + L L G E
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQE 773
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC---MPDNAISS 364
+AR++ D++L+R S + + + + A + R+ R PD
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYG 91
Query: 365 TIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL-WDDMVE 422
+I C+ G++ L + ++G + + L+ G+C ++A + M E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK---GCFPNKTSFSLLIEGLYESGN 479
G PNVF+YN+L++G C ++E + +L M D G P+ S++ +I G ++ G+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 106/252 (42%), Gaps = 12/252 (4%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+D A+++ +G N TY ++I+ + + L E++ + P+I
Sbjct: 527 MDEAMKLL--SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT- 583
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ +++ R A + ++RI + Q + + N +L+ L +NK D MF+
Sbjct: 584 ---YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Query: 174 N-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N K+ F NI+I AL K + A + S G+VPN T+ + +
Sbjct: 641 NLCLMDLKLEARTF--NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+G +E ++F + D G D+ ++ ++ G +T A + +++ T
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758
Query: 293 YGVMIEAFCKGK 304
+ I+ GK
Sbjct: 759 ASLFIDLLSGGK 770
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 215/430 (50%), Gaps = 46/430 (10%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+ TV+ + G + A T+ + + V + ++++ AL + +K ++++ M
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
KN V+P+ T N ++ C + AI L +M S G+ PN+VT+++++
Sbjct: 264 KNG-----VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G A+++F + RG PD TY L+ GY G L + ++D M NG++P+
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ ++I A+ K +K +A + M Q P+ VID+LC+ G V+DA +++++
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 353 RKNCMPDNAISSTIIHWL-----------------------------------CKEGKIW 377
+ P+ + +++IH L CKEG++
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498
Query: 378 EAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E++KLFD R G P ++TYNTLI G C + ++ EA +L MV GV+P++ TY LI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS- 495
G+C++ + + + +EM+ G PN +++++++GL+ + ++ T SG+
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618
Query: 496 VESDSWNFLL 505
+E ++N +L
Sbjct: 619 LELSTYNIIL 628
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 184/407 (45%), Gaps = 39/407 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AGR +L + K + + LL L +KR + + +P+VF
Sbjct: 105 AGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVF 164
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ N L+K LC ++ + A+ +L M G P++V++ T+L G+ GD + A +
Sbjct: 165 SYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 244 GDILDRGWVPDATTYTVL-----------------------------------MDGYIKL 268
++LDRG +PD TY+ + + GY
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G+ +A+ + +M +GVEPN VTY ++ CK +S EAR + D M +R P A
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
++ +G + + L ++R PD+ + + +I K+ K+ +A +F + +
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P+++ Y T+I +C+S + +A ++ M+++G+ PN+ Y LI G C +
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDK 464
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ EMLD+G N F+ +I+ + G E K+ + G
Sbjct: 465 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 206/442 (46%), Gaps = 10/442 (2%)
Query: 77 NYDTYHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY S+++ L + R+ +A + +T+ P+I + T+++ Y G
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT----YRTLLQGYATKGALVEM 360
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + +Q N L+ A + ++ D L+F R + + PNV +I
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR-QHGLNPNVVCYGTVID 419
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK V+ A+ ++M G+ PN++ +T+++ G + A+ + ++LDRG
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + ++D + K GR+ ++ K+ D M GV+P+ +TY +I+ C K EA LL
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M+ P +I+ C +++DA L+K ++ P+ + I+ L
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+ AK+L+ + G+ L TYN ++ G+C++ EA R++ ++ ++ T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMAT 491
N++I K G E + G P+ ++SL+ E L E G+ E+ + +SM
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Query: 492 ASGSVESDSWNFLLTRIVSDLD 513
S +S N ++ +++ D
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGD 741
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 40/340 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
KV P V T ILI K LC A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---GWVPDATTYTV 260
+ VL M +G +P++ ++ +L G + A + + D G PD +Y
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++G+ K G A EM D G+ P+ VTY +I A CK + +A +L+ M++
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P ++ C G+ ++A K++ P+ S+++++LCK G+ EA+
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K+FD +RG P + TY TL+ G L E L D MV G++P+ +N+LI +
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
K + + + +M G PN + +I+ L +SG+
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 196/428 (45%), Gaps = 4/428 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ A A + +LL + +N I+ ++F +I Y + + A+ F +
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNG-IQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +V T+++ L ++ D L F+ + + PN+ LI LC D
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE-GLTPNIIVYTSLIHGLCTCD 460
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ EM G+ N + +I+ + G + ++++F ++ G PD TY
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG G++ +A K++ M GV+P+ VTYG +I +C+ + +A L +M+
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ L + A EL+ + + + + + I+H LCK EA
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++F + T+N +I + + + EA L+ G+ P+V TY+++ +
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVE 497
+ G+ +E + M + GC + + ++ L + G+ G + M S+E
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLE 760
Query: 498 SDSWNFLL 505
+ + +FLL
Sbjct: 761 ASTASFLL 768
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 6/293 (2%)
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P + T+ ++G G ++ G+++ +G+ DA T+T L+ G R +DA+
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 276 K-VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK---YVPSSALCCKV 331
V+ M + G P+ +Y +++ C +S EA LL M + P V
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
++ +EG + A + +L + +PD S+II LCK + +A ++ + + G
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+P +TYN+++ G C S + EA M GVEPNV TY+ L+ CK G + E +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
I + M +G P+ ++ L++G G E+ ++ + +G ++ D F
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG-IQPDHHVF 379
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 138/317 (43%), Gaps = 2/317 (0%)
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
+ ++ + N Y S+IH L +D E L+ E+ + I F ++I
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIFFNSIID 489
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
++ GR + K F + + V+ + + NTL++ + D + S V
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA-SMVSVGVK 548
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T LI C+ ++ A+ + EM S G+ PN++T+ IL G AK +
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ I G + +TY +++ G K +A+++ + ++ T+ +MI A K
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA++L VP + + L E+G +E+ +L+ + C D+ +
Sbjct: 669 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 728
Query: 363 SSTIIHWLCKEGKIWEA 379
++I+ L + G I A
Sbjct: 729 LNSIVRKLLQRGDITRA 745
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC---MPDNAISS 364
+AR++ D++L+R S + + + A + R+ R P +
Sbjct: 38 DARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYA 96
Query: 365 TIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL-WDDMVE 422
+I C+ G++ L + ++G +T+ L+ G+C ++A + M E
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK---GCFPNKTSFSLLIEGLYESGN 479
G P+VF+YN L++G C ++E + +L M D G P+ S++ ++ G ++ G+
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 245/540 (45%), Gaps = 82/540 (15%)
Query: 26 LSTITVTPPIKPWPQRLYP---KRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTY 81
+S + PI+P + L P K +++ + +++ N L + F +A + S +++
Sbjct: 38 ISILAKKKPIEPALEPLVPFLSKNIITSVIKEEVNRQLGFRFFIWASRRERLRSG--ESF 95
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
+I L+ D L ELK + F +I Y G E AV++F R++
Sbjct: 96 GLVIDMLSEDNGCDLYWQTLEELKSGG-VSVDSYCFCVLISAYAKMGLAEKAVESFGRMK 154
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+F+ + V + N +L +++ + ++ N K PN++T IL+ L KK
Sbjct: 155 EFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
A ++ D+M G+ PN VT+T ++ G RG E+A+++F ++ G PD+ + L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNAL 274
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+DG+ KLGR+ +A +++ E +G Y +I+ + ++ +A L +ML+R
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNI 334
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL----------- 370
P L +I L + GK+EDA +L + + K PD + +I L
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 371 ------------------------CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
C+ G + +A+++F E E+ G PS+ T+N LI G+C
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLC 454
Query: 406 ESAELTEA-----------------------GRLWDDMVEKGV----------------E 426
+S EL EA R +D MV+ G
Sbjct: 455 KSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNS 514
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P++ +YN+LI GFC+ G+ +++L + KG P+ +++ LI GL+ G E E K+
Sbjct: 515 PDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 158/352 (44%), Gaps = 15/352 (4%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPEL 132
S N TY +I L + + + L E+K N N ++ + GR
Sbjct: 230 SPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHN---ALLDGFCKLGRMVE 286
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + EK +R ++L++ L + +RY ++ N + + P++ ILI
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKR-NIKPDIILYTILI 345
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ L K +E A+++L MPS G+ P+ + ++ RG +E + + ++ +
Sbjct: 346 QGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PDA T+T+L+ + G + A ++ E+E +G P+ T+ +I+ CK + EAR L
Sbjct: 406 PDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 313 LDDMLQRKYVPSSALC------CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
L M + P+S + D + + G + A + PD + +
Sbjct: 466 LHKMEVGR--PASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVL 523
Query: 367 IHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
I+ C+EG I A KL + + +G P +TYNTLI G+ EA +L+
Sbjct: 524 INGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE-AKKLFDEFE 387
C +I + G E A E + R+ +C PD + I+ + +E + A +++E
Sbjct: 131 CVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEML 190
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ + P+L T+ L+ G+ + ++A +++DDM +G+ PN TY +LI G C+ G+ +
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPE 250
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ ++ EM G +P+ + + L++G + G E +++ + G V
Sbjct: 251 DARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 153/388 (39%), Gaps = 57/388 (14%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEI--KCGENLFITVIRNYGLAGRPELAVKTFL 138
Y+++I L + SL E+ + C + I + GL + E + FL
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAE---EIFL 432
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV--VPNVF-----TCNIL 191
IEK SV + N L++ L ++ L+ HK +V ++F + N
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLL----HKMEVGRPASLFLRLAHSGNRS 488
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ + + A + L G P++V++ ++ G+ GDI+ A ++ + +G
Sbjct: 489 FDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGL 548
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD+ TY L++G ++GR +A K+ +D
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFYAKDD---------------------------- 580
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIHWL 370
+ S A+ ++ C K+ A LW + L+K +C+ D ++ I
Sbjct: 581 ---------FRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDE--TANEIEQC 629
Query: 371 CKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
KEG+ A ++L + R +L Y + G+C+S EA ++ + EK +
Sbjct: 630 FKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTP 689
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+ LI G CK I + LD
Sbjct: 690 PSCVKLIHGLCKREQLDAAIDVFLYTLD 717
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 183/349 (52%), Gaps = 3/349 (0%)
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
E+ Q V + N L+N LV K Y + + + K + PN F+ NILI++ +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEML-KAGIAPNTFSFNILIRSFARTRR 169
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYT 259
+ A+ + M P+L T ++ G E A VF +++ G+V PD +T
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ +K R+ +A +V +ME G P+ + Y MI+ K + EA +LD+ML +
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP+ +++ LC+ G +E A EL++ + P++ I +++IH K G++ EA
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LFDE E G P ++T+ +I G+C+S +A + +++M+ G +PNV TY +IQG
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
KIG RI++ M+ GCFP+ ++ L++G + G E +++
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 198/422 (46%), Gaps = 40/422 (9%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
A+ F +AG+ F H+ TY+ +++ L + + ++ E+ +K G
Sbjct: 102 AISFFRWAGE-QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM-----LKAG------ 149
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+A TF S N L+ + + +R D F+ + K
Sbjct: 150 ------------IAPNTF-------------SFNILIRSFARTRRADDAVTCFEIMKRK- 183
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP-NLVTHTTILGGYVWRGDIEN 238
+ P++ T IL+ LCK E A V EM +MG VP + HT ++ + ++
Sbjct: 184 RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKE 243
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ VFG + G+ PDA Y ++DG K G +A+KV+D M P EVTYG+++
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ CK A L M + P+S + +I + G++++AC L+ ++ P
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRP 363
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D + +I LCK G +A K F+E RG P+++TY T+I G+ + + A R+
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M+ G P+ TY L+ GFCK+G E ++L+E+ PN +S L+ GL +
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDG 483
Query: 478 GN 479
G+
Sbjct: 484 GS 485
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 201/410 (49%), Gaps = 17/410 (4%)
Query: 77 NYDTYHSIIHKLARAR-AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N +++ +I AR R A DAV E+ + K + F+ ++ AG E A +
Sbjct: 153 NTFSFNILIRSFARTRRADDAVTCF--EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE 210
Query: 136 TFLRIEKFNVQRSVRSLNT-LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F + R+L+T ++ L++ KR +F K P+ N +I
Sbjct: 211 VFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVF-GQMEKCGFPPDAIAYNTMIDG 269
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L K + A++VLD M + VP VT+ ++ G +E A+ +F + G+ P+
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPN 329
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+ YT L+ G+ K GR+ +A + DEM + G P+ +T+ VMI+ CK +A +
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M++ P+ +I L + G+V +A + K ++ C PD+ ++ CK G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449
Query: 375 KIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG------VEP 427
++ EA +L DE ++ S P+L Y++L+ G+C+ + + DD+ E+ ++P
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE---KTLDDLFEQSKAAAETLDP 506
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ +I G CK G E RI + M+ +GC P+ T++++LI GL S
Sbjct: 507 GLCCS--IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS 554
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 207/420 (49%), Gaps = 15/420 (3%)
Query: 77 NYDTYHSIIHKLAR----ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N TY +II L++ A AF ++ ++ + +I ++ + GR +
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT-----YICLLDGFCKLGRLDE 453
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNIL 191
A + ++K + +++ ++L+N L + + +F+ S+ + + C+I+
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSII 513
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--IENAKRVFGDILDR 249
+ LCK ++ A R+ M S G P+ T+ ++ G + +E A + D+
Sbjct: 514 V-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G++PDA TYT L G K+G + AVK+++E G + V Y + C + A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L +M+++ P +A C +I+ L + K+EDAC+ + ++ K P A + ++
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692
Query: 370 LCKEGKIWEAKKLFDE-FERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC G + EA F+ RG + S++ Y+ LI G C++ ++ A +L++DM+ +G P
Sbjct: 693 LCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
T L G + G ++ +L+EM G P+ +F+ +++GL +S G++ K+V
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 167/344 (48%), Gaps = 5/344 (1%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+VFT N L+ L + + + +EM G+ PN + ++ + ++A F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAFCK 302
+ + PD T+ +L+D K G A +V EM G V P+ + M+ K
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EAR + M + + P + +ID L + G ++A ++ +L K C+P
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++ LCK G + A++LF G P+ + Y +LI G +S + EA L+D+MV
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
E G P+V T+ ++I G CK GN ++ + EEM+ GC PN +++ +I+GL + G
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 482 EVGKVVSMATASGSV-ESDSWNFLLTRI--VSDLDSGAGALDEL 522
+++ A G +S ++ LL + LD A LDEL
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 219/498 (43%), Gaps = 62/498 (12%)
Query: 47 LVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
LV+ + + L+ A ++F A F PN Y S+IH A++ SL E+
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSV----IYTSLIHGFAKSGRMKEACSLFDEM 356
Query: 105 KQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ P++ +I +G E A K+F + + + +V + T++ L +
Sbjct: 357 VEAGYRPDVI----THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
R + K P+ T L+ CK ++ A ++LDE+ PNL
Sbjct: 413 IGRVANAFRIMKG-MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471
Query: 222 THTTILGGYVWRGDIEN------------------------------------AKRVFGD 245
+++++ G G +E A R+F
Sbjct: 472 LYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQR 531
Query: 246 ILDRGWVPDATTYTVLMDGYIKL--GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G PDATTY +L++G + R+ A ++ ++E G P+ VTY + CK
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591
Query: 304 KKSGEARNLLDDMLQRKY----VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+ A +L++ R + V +ALC LC +G+V+ A L++ ++R+ PD
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTG----LCYQGQVDRAVSLFQEMVRQGGAPD 647
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
A II+ L K K+ +A K FDE +G P++ TY L+ +C + + EA ++
Sbjct: 648 AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707
Query: 419 DMVEKG-VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M+ +G + +V Y+ LI GFCK +++ E+M+ +G P + + L +GL S
Sbjct: 708 SMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767
Query: 478 GNEGEVGKVVSMATASGS 495
G + +++ A GS
Sbjct: 768 GKTEKAQELLQEMAAGGS 785
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 168/383 (43%), Gaps = 38/383 (9%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N Y S+++ L + + L E + L ++I GR + A
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEAC 526
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--NSRHKFKVVPNVFTCNILI 192
+ F R+ + + N L+N L ++ R + V F + K +P+ T L
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRS-RENRVERAFALLHDLEKVGYLPDAVTYTPLC 585
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK +V+ A+++L+E S G ++V +T + G ++G ++ A +F +++ +G
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PDA Y +++G IK+ +L DA K DEM G +P TY +++A C EA +
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ ML R + S + I +IH CK
Sbjct: 706 FESMLARGELVGSVM----------------------------------IYDALIHGFCK 731
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
K+ A KLF D RG++P+ +T +L G+ S + +A L +M G P+ T
Sbjct: 732 ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Query: 432 YNMLIQGFCKIGNAKEGIRILEE 454
+ ++ G K + + +++++E
Sbjct: 792 FTAILDGLRKSDESGKLLKLVQE 814
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+ D TY LM+ + + + +EM G+ PN ++ ++I +F + +++
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA--- 170
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+DA ++ + RK C PD ++
Sbjct: 171 --------------------------------DDAVTCFEIMKRKRCKPDLHTFLILVDC 198
Query: 370 LCKEGKIWEAKKLFDE-FERGSIPSLLTYNT-LIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK G +A ++F E G +P +T ++ + ++ + EA ++ M + G P
Sbjct: 199 LCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPP 258
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ YN +I G K G+A+E +++L+ ML K C P + ++ +L+ L ++G ++
Sbjct: 259 DAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELF 318
Query: 488 SMATASG 494
+ ASG
Sbjct: 319 RVMAASG 325
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 215/430 (50%), Gaps = 46/430 (10%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+ TV+ + G + A T+ + + V + ++++ AL + +K ++++ M
Sbjct: 204 YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV 263
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
KN V+P+ T N ++ C + AI L +M S G+ PN+VT+++++
Sbjct: 264 KNG-----VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G A+++F + RG PD TY L+ GY G L + ++D M NG++P+
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ ++I A+ K +K +A + M Q P+ VID+LC+ G V+DA +++++
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 353 RKNCMPDNAISSTIIHWL-----------------------------------CKEGKIW 377
+ P+ + +++IH L CKEG++
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498
Query: 378 EAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E++KLFD R G P ++TYNTLI G C + ++ EA +L MV GV+P++ TY LI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS- 495
G+C++ + + + +EM+ G PN +++++++GL+ + ++ T SG+
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618
Query: 496 VESDSWNFLL 505
+E ++N +L
Sbjct: 619 LELSTYNIIL 628
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 192/420 (45%), Gaps = 42/420 (10%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AGR +L + K + + LL L +KR + + +P+VF
Sbjct: 105 AGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVF 164
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ N L+K LC ++ + A+ +L M G P++V++ T+L G+ GD + A +
Sbjct: 165 SYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 244 GDILDRGWVPDATTYTVL-----------------------------------MDGYIKL 268
++LDRG +PD TY+ + + GY
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G+ +A+ + +M +GVEPN VTY ++ CK +S EAR + D M +R P A
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
++ +G + + L ++R PD+ + + +I K+ K+ +A +F + +
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P+++ Y T+I +C+S + +A ++ M+++G+ PN+ Y LI G C +
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDK 464
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLL 505
++ EMLD+G N F+ +I+ + G E K+ + G V+ D ++N L+
Sbjct: 465 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYNTLI 523
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 206/442 (46%), Gaps = 10/442 (2%)
Query: 77 NYDTYHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY S+++ L + R+ +A + +T+ P+I + T+++ Y G
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT----YRTLLQGYATKGALVEM 360
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + +Q N L+ A + ++ D L+F R + + PNV +I
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR-QHGLNPNVVCYGTVID 419
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK V+ A+ ++M G+ PN++ +T+++ G + A+ + ++LDRG
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + ++D + K GR+ ++ K+ D M GV+P+ +TY +I+ C K EA LL
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M+ P +I+ C +++DA L+K ++ P+ + I+ L
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+ AK+L+ + G+ L TYN ++ G+C++ EA R++ ++ ++ T+
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMAT 491
N++I K G E + G P+ ++SL+ E L E G+ E+ + +SM
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Query: 492 ASGSVESDSWNFLLTRIVSDLD 513
S +S N ++ +++ D
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGD 741
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 40/340 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
KV P V T ILI K LC A
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---GWVPDATTYTV 260
+ VL M +G +P++ ++ +L G + A + + D G PD +Y
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++G+ K G A EM D G+ P+ VTY +I A CK + +A +L+ M++
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P ++ C G+ ++A K++ P+ S+++++LCK G+ EA+
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K+FD +RG P + TY TL+ G L E L D MV G++P+ +N+LI +
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
K + + + +M G PN + +I+ L +SG+
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 196/428 (45%), Gaps = 4/428 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ A A + +LL + +N I+ ++F +I Y + + A+ F +
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRN-GIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +V T+++ L ++ D L F+ + + PN+ LI LC D
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE-GLTPNIIVYTSLIHGLCTCD 460
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ EM G+ N + +I+ + G + ++++F ++ G PD TY
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG G++ +A K++ M GV+P+ VTYG +I +C+ + +A L +M+
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ L + A EL+ + + + + + I+H LCK EA
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++F + T+N +I + + + EA L+ G+ P+V TY+++ +
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVE 497
+ G+ +E + M + GC + + ++ L + G+ G + M S+E
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLE 760
Query: 498 SDSWNFLL 505
+ + +FLL
Sbjct: 761 ASTASFLL 768
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 6/293 (2%)
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P + T+ ++G G ++ G+++ +G+ DA T+T L+ G R +DA+
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 276 K-VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK---YVPSSALCCKV 331
V+ M + G P+ +Y +++ C +S EA LL M + P V
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
++ +EG + A + +L + +PD S+II LCK + +A ++ + + G
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+P +TYN+++ G C S + EA M GVEPNV TY+ L+ CK G + E +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
I + M +G P+ ++ L++G G E+ ++ + +G ++ D F
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG-IQPDHHVF 379
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 138/317 (43%), Gaps = 2/317 (0%)
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
+ ++ + N Y S+IH L +D E L+ E+ + I F ++I
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIFFNSIID 489
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
++ GR + K F + + V+ + + NTL++ + D + S V
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA-SMVSVGVK 548
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T LI C+ ++ A+ + EM S G+ PN++T+ IL G AK +
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ I G + +TY +++ G K +A+++ + ++ T+ +MI A K
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA++L VP + + L E+G +E+ +L+ + C D+ +
Sbjct: 669 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 728
Query: 363 SSTIIHWLCKEGKIWEA 379
++I+ L + G I A
Sbjct: 729 LNSIVRKLLQRGDITRA 745
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC---MPDNAISS 364
+AR++ D++L+R S + + + A + R+ R P +
Sbjct: 38 DARHVFDELLRRGRGASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYA 96
Query: 365 TIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL-WDDMVE 422
+I C+ G++ L + ++G +T+ L+ G+C ++A + M E
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK---GCFPNKTSFSLLIEGLYESGN 479
G P+VF+YN L++G C ++E + +L M D G P+ S++ ++ G ++ G+
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 480 E 480
Sbjct: 217 S 217
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 222/499 (44%), Gaps = 54/499 (10%)
Query: 41 RLYPKRLVSMIFRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVE 98
RL P +V +++R +N L L + G PNF H + ++IH L R+ R DA
Sbjct: 75 RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQS 134
Query: 99 SLLTELKQNP----EI---------KCGEN--LFITVIRNYGLA---------------- 127
LL ++++ EI CG N +F +IR Y A
Sbjct: 135 CLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK 194
Query: 128 -------------------GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV 168
G ELA + I + V +V +LN ++NAL ++ + + V
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+ K V P++ T N LI A K +E A +++ MP G P + T+ T++
Sbjct: 255 GTFLSQVQEK-GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G G E AK VF ++L G PD+TTY L+ K G + + KV +M V P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V + M+ F + +A + + + +P + + +I C +G + A L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+L++ C D +TI+H LCK + EA KLF+E ER P T LI G C+
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L+ M EK + +V TYN L+ GF K+G+ I +M+ K P S+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 468 SLLIEGLYESGNEGEVGKV 486
S+L+ L G+ E +V
Sbjct: 554 SILVNALCSKGHLAEAFRV 572
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 216/419 (51%), Gaps = 11/419 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
FS TY+++I+ L + ++ + + E+ ++ P+ +L + + G
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK----GDV 356
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
K F + +V + +++++ ++ D LM+ NS + ++P+ I
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA-LMYFNSVKEAGLIPDNVIYTI 415
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI+ C+K + A+ + +EM G ++VT+ TIL G R + A ++F ++ +R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD+ T T+L+DG+ KLG L +A+++ +M++ + + VTY +++ F K A+
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ DM+ ++ +P+ +++ LC +G + +A +W ++ KN P I +++I
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK--GVEP 427
C+ G + + ++ G +P ++YNTLI G +++A L M E+ G+ P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+VFTYN ++ GFC+ KE +L +M+++G P++++++ +I G N E ++
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 140/283 (49%), Gaps = 4/283 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++I+H L + + + L E+ + L I +I + G + A++ F +
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI-LIDGHCKLGNLQNAMELFQK 505
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ ++ V + NTLL+ + D ++ + K +++P + +IL+ ALC K
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKG 564
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A RV DEM S + P ++ +++ GY G+ + + ++ G+VPD +Y
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 260 VLMDGYIKLGRLTDAVKVMDEMED--NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ G+++ ++ A ++ +ME+ G+ P+ TY ++ FC+ + EA +L M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+R P + +I+ + + +A + +L++ PD+
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N+ + ++I + + +K EA + + + S C +I L G VE A ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+ + R + + +++ LCK+GK+ + + E+G P ++TYNTLI+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ EA L + M KG P V+TYN +I G CK G + + EML G P+ T++
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 468 SLLIEGLYESGNEGEVGKVVS 488
L+ + G+ E KV S
Sbjct: 344 RSLLMEACKKGDVVETEKVFS 364
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 331 VIDLL----CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
V DLL + K+ +A E + L K + +I L + G + A ++ E
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 387 ERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
R + ++ T N ++ +C+ ++ + G + EKGV P++ TYN LI + G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFL 504
+E ++ M KG P +++ +I GL + G +V + SG S +S ++ L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 505 L 505
L
Sbjct: 347 L 347
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 196/400 (49%), Gaps = 6/400 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y++++ A DA L+ E+ P+ + T+IR GR A+
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMPVEPD----AYTYNTLIRGLCGRGRTANALAVLDE 183
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V + LL A + Y + R K P++ T N+++ +C++
Sbjct: 184 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEG 242
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ AI L +PS G PN V++ +L G E+A+ + G++ +G P+ T+
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ + G + A++V++++ G PN ++Y ++ AFCK KK +A LD M+ R
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC G+V+ A EL +L K C P +T+I L K GK EA
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 422
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E +G P ++TY+T+ AG+C + +A R + + + G+ PN YN +I G
Sbjct: 423 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 482
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK I + M+ GC PN++++++LIEGL G
Sbjct: 483 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 522
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 13/318 (4%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKT 136
TY+ +++ + + R DA+E L K P C N + V++ A R E A +
Sbjct: 230 TYNVVVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 285
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKA 194
+ + +V + N L++ L R LV L K+ PN + N L+ A
Sbjct: 286 MGEMGQKGCPPNVVTFNMLISFLC---RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 342
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK+ ++ A+ LD M S G P++V++ T+L G+++ A + + D+G P
Sbjct: 343 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 402
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+Y ++DG K G+ +A+++++EM G++P+ +TY + C+ + +A
Sbjct: 403 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 462
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P++ L +I LC+ + A +L+ ++ CMP+ + + +I L EG
Sbjct: 463 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 522
Query: 375 KIWEAKKLFDEF-ERGSI 391
I EA+ L DE RG +
Sbjct: 523 LIKEARDLLDELCSRGVV 540
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 162/330 (49%), Gaps = 16/330 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFS--HNYDTYHSIIHKLARARAFDAVESLLTEL 104
+V+ I ++ +D A++ K P++ N +Y+ ++ L A ++ E L+ E+
Sbjct: 234 VVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 289
Query: 105 KQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
Q P N+ I+ + GL E A++ +I K+ + S N LL+A +
Sbjct: 290 GQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 346
Query: 163 KRYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
K+ D + L SR + P++ + N L+ ALC+ +V+ A+ +L ++ G P L
Sbjct: 347 KKMDKAMAFLDLMVSRGCY---PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+++ T++ G G + A + +++ +G PD TY+ + G + R+ DA++ +
Sbjct: 404 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 463
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
++D G+ PN V Y +I CK +++ A +L M+ +P+ + +I+ L EG
Sbjct: 464 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 523
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+++A +L L + + + I+ I L
Sbjct: 524 IKEARDLLDELCSRGVVRKSLINKGAIRLL 553
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 174/325 (53%), Gaps = 1/325 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL+A+V+ +Y V + + PN++T +I + C+ V+ VL ++ +
Sbjct: 98 LLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKL 157
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ P +VT TT++ G G+ A +F D++ +G PD TY +++G K+G A
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ +ME+ G +PN VTY +I++ C+ + EA ++ M + P +I
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
LC+ + ++A L + N MPD + ++ CKEGK+ EA + E G P+
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPN 337
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TY++L+ G ++ EA +L+ M+ KG +PN+F+YN+LI G+CK E +++
Sbjct: 338 VVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFN 397
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESG 478
EM+ +G PN S++ LI G + G
Sbjct: 398 EMIHQGLTPNNVSYNTLIHGFCQLG 422
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 199/383 (51%), Gaps = 7/383 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY++II+ L + A LL K+ E C N+ + T+I + A+ F
Sbjct: 200 TYNTIINGLCKIGETAAAAGLL---KKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF 256
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + + + +L+ L + R+ + N ++P++ T N+L+ CK
Sbjct: 257 SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALL-NEMTSLNIMPDIVTFNVLVDTFCK 315
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ V A+ VL M MG+ PN+VT+++++ GY D+ A+++F ++ +G P+ +
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +L++GY K R+ +A+++ +EM G+ PN V+Y +I FC+ K EA++L +M
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+P ++D C++G + A L++ + P+ + + ++H +CK G
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A+KLF E F +G P + Y T+I G+C+ L EA + +M G P+ +YN++I
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVII 555
Query: 437 QGFCKIGNAKEGIRILEEMLDKG 459
+G + + + ++ EM D+G
Sbjct: 556 RGLLQHKDESRALLLVGEMRDRG 578
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 183/361 (50%), Gaps = 2/361 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R +L ++ K +Q ++ + TL+N L + + +F + K P+V+T
Sbjct: 143 RVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK-GCQPDVYTY 201
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N +I LCK + A +L +M G PN+VT++T++ + A +F +
Sbjct: 202 NTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKA 261
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G PD TYT L+ G K R +A +++EM + P+ VT+ V+++ FCK K E
Sbjct: 262 KGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSE 321
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L M + P+ ++ V +A +L+ ++ K C P+ + +I+
Sbjct: 322 ALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILIN 381
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK +I EA +LF+E +G P+ ++YNTLI G C+ +L EA L+ +M G P
Sbjct: 382 GYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP 441
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
++FTY++L+ GFCK G + R+ M PN +++L+ + +SGN + K+
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLF 501
Query: 488 S 488
S
Sbjct: 502 S 502
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 205/404 (50%), Gaps = 7/404 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
T+ ++I+ L + F L ++ C +++ T+I G A
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAK---GCQPDVYTYNTIINGLCKIGETAAAAGLL 221
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E+ Q ++ + +TL+++L +++ + +F + K + P++FT LI+ LCK
Sbjct: 222 KKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK-GISPDIFTYTSLIQGLCK 280
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A +L+EM S+ ++P++VT ++ + G + A V + + G P+ T
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ LM GY + +A K+ M G +PN +Y ++I +CK K+ EA L ++M+
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P++ +I C+ GK+ +A +L++ + +PD S ++ CK+G +
Sbjct: 401 HQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLG 460
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +LF + + P+L+ Y L+ MC+S +A +L+ ++ +G++P+V Y +I
Sbjct: 461 KAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTII 520
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
G CK G E + M GC P++ S++++I GL + +E
Sbjct: 521 NGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDE 564
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 112 CGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
C N+F +I Y A R + A++ F + + + S NTL++ Q +
Sbjct: 369 CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+F+N + P++FT +IL+ CK+ + A R+ M S + PNLV +T ++
Sbjct: 429 DLFRNMCTNGNL-PDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G+ ++A+++F ++ +G P YT +++G K G L +A++ ME +G P+
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E++Y V+I + K A L+ +M R ++ C + +C+ KV
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPC---LSEVCQGKKV 596
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 186/341 (54%), Gaps = 2/341 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V + NTL+ A + D + R V P++ T N ++ LCK +E A ++
Sbjct: 189 NVVTYNTLVAAFCRAGEVDAAERLVGVMREG-GVRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
DEM G+ P+ V++ T++ GY G + A VF ++ +G VPD T+T L+ +
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G L AV ++ +M + G+ NE T+ +I+ FC+ +A + +M + + PS
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVC 367
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-F 386
+I+ C+ G++++A EL + K PD STI+ CK G A +L +
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
++G +P +TY++LI G+CE L +A L++ M++ G++P+ FTY LI G CK GN +
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ + + +EM+ KG P+ ++S+LI+GL +S E +++
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 163/305 (53%), Gaps = 2/305 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVL-DEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V PNV+T NIL++ALC + E A+ V+ D+M G PN+VT+ T++ + G+++ A
Sbjct: 150 VAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAA 209
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+R+ G + + G P T+ +++G K GR+ DA K+ DEM G+ P+ V+Y ++
Sbjct: 210 ERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSG 269
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+CK EA + +M Q+ VP +I +C G +E A L ++ + +
Sbjct: 270 YCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMN 329
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I C+ G + +A E I PS++ YN LI G C+ + EA L
Sbjct: 330 EFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIH 389
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M KG++P+V TY+ ++ G+CKIG+ + +ML KG P+ ++S LI GL E
Sbjct: 390 EMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449
Query: 479 NEGEV 483
G+
Sbjct: 450 RLGDA 454
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 219/462 (47%), Gaps = 53/462 (11%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++++ RA DA E L+ +++ ++ F TV+ AGR E A K
Sbjct: 189 NVVTYNTLVAAFCRAGEVDAAERLVGVMREGG-VRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + S NTL++ + +F K VVP+V T LI A+C
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK-GVVPDVVTFTSLIHAMC 306
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++E A+ ++ +M G+ N T T ++ G+ G +++A ++ + P
Sbjct: 307 RAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVV 366
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y VL++GY KLGR+ +A +++ EME G++P+ VTY ++ +CK + A L M
Sbjct: 367 CYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKM 426
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L++ VP + +I LCEE ++ DACEL++++L+ PD +T+I CKEG +
Sbjct: 427 LKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNV 486
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL------------------- 416
+A L DE ++G +P ++TY+ LI G+ +SA EA RL
Sbjct: 487 QKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEAL 546
Query: 417 -------------------------------WDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ M+++ + + Y++LI G C+ GN
Sbjct: 547 MHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNI 606
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ + +++L G PN TS L+ GL+E G E V+
Sbjct: 607 MKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVI 648
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 145/282 (51%), Gaps = 3/282 (1%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P+L+ + +L + + +A+R+ +L G P+ TY +L+ G+ +A
Sbjct: 115 GYAPSLLAYNAVLLA-LSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 275 VKVM-DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
+ V+ D+M G PN VTY ++ AFC+ + A L+ M + PS V++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
LC+ G++EDA +++ + R+ PD +T++ CK G + EA +F E ++G +P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++T+ +LI MC + L A L M E+G+ N FT+ LI GFC+ G + + +
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+EM + P+ +++LI G + G E +++ A G
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 194/413 (46%), Gaps = 26/413 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y++++ +A ++ E+ Q P++ F ++I AG E AV
Sbjct: 262 SYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV----TFTSLIHAMCRAGNLERAVAL 317
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + ++ + + L++ +N D L K R + ++ P+V N+LI C
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMR-ECRIQPSVVCYNVLINGYC 376
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A ++ EM + GM P++VT++TIL GY GD ++A + +L +G VPDA
Sbjct: 377 KLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI 436
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY+ L+ G + RL DA ++ ++M G++P+E TY +I+ CK +A +L D+M
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P +ID L + + ++A L +L ++ +PDN ++H C+ +
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC-CRTAEF 555
Query: 377 WEAKKLFDEFERGSI--------PSLL---------TYNTLIAGMCESAELTEAGRLWDD 419
L F + S+L Y+ LI G C + +A
Sbjct: 556 KSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQ 615
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
++ G PN + L++G + G E +++E+L+ + + LI+
Sbjct: 616 LLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 213/453 (47%), Gaps = 18/453 (3%)
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQ---------------NPEIKCGENLFITV 120
H Y H L +AR +D+ +S+L L Q P ++F +
Sbjct: 861 HLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLL 920
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK 180
IR Y G + AV+TF + + SV + N +L ++V++KR +LV +F+ K
Sbjct: 921 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-G 979
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PNV T NILI LC + +++ A +L +M G VP +VT+ T+L Y +G + A
Sbjct: 980 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 1039
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ +G D TY V +D R A ++ +M + PNEVTY +I F
Sbjct: 1040 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K K G A + ++M + P+ +I C G E+A L + +
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDD 419
T+++ LCK K AK+L + + + Y LI G+C++ L EA +L +
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 1219
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + GV P+V TY+ LI GFC++GN K I+ M G NK +S LI + GN
Sbjct: 1220 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 1279
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
E KV ++ +G + + N L++ + D
Sbjct: 1280 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 1312
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 207/408 (50%), Gaps = 6/408 (1%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N TY+++I+ + + E+ + ++ + +I + G E A+
Sbjct: 1086 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKF-DLSPNCVTYNALIGGHCHVGDFEEAL 1144
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ +E ++ + + TLLN L ++++++L + + R VV ++ +LI
Sbjct: 1145 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI-AYTVLIDG 1203
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK ++ A++++ M G+ P+++T+++++ G+ G+I++AK + + G V +
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y+ L+ + + G +T+A+KV M NG + T V++ + C+ K GEA L
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + VP+S +I+ G +A + +++ P +++ LCK G
Sbjct: 1324 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 1383
Query: 375 KIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+ EAKK + G++ S++ YNTL+A C+S L EA L+D MV+ V P+ +TY
Sbjct: 1384 NLVEAKKFLNRLHYIPGAVDSVM-YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 1442
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGC-FPNKTSFSLLIEGLYESGN 479
+ L+ G C+ G A + + + +G FPN ++ L++GL ++G+
Sbjct: 1443 SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 1490
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FTCN+L+ +LC+ + A + L M +G+VPN +T+ I+ GY GD NA F D
Sbjct: 1300 FTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDD 1359
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ G P TY L+ G K G L +A K ++ + + V Y ++ CK
Sbjct: 1360 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGN 1419
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK-VEDACELWKRLLRKNCMPDNAISS 364
EA L D M+Q +P S ++ LC +GK V C + R P++ + +
Sbjct: 1420 LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYT 1479
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ L K G A F+E ++G+ P + +N +I ++ +A + M
Sbjct: 1480 CLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWW 1539
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GV PN+ TYN+L+ GF K + + M+ +G FP+K +F LI GL +SG
Sbjct: 1540 GVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 1594
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 185/407 (45%), Gaps = 6/407 (1%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY S++ L R +A AV T + + ++ ++ AG P+ A F
Sbjct: 1441 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFE 1499
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ K + N ++++ + + + F R + V PN+ T NIL+ KK
Sbjct: 1500 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRW-WGVCPNLATYNILLHGFSKK 1558
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ + + M G+ P+ +T +++ G G + ++ G ++ G + D T+
Sbjct: 1559 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 1618
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L++ Y + G++ A +++ M GV P+ TY + K E+ +L +ML+
Sbjct: 1619 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 1678
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+P A +I+ +C G ++ A +L + S ++ L GK +
Sbjct: 1679 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 1738
Query: 379 AKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + D R +P++ T+ TL+ C A++ EA +L M G++ +V YN+LI
Sbjct: 1739 AMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIM 1798
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN--EGE 482
G C G++ + EEM + PN T++++L++ + + N +GE
Sbjct: 1799 GMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1845
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 183/451 (40%), Gaps = 11/451 (2%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
HP+F TY S++ L + + L L P ++ T++ +G
Sbjct: 1366 HPSFF----TYGSLLKGLCKGGNLVEAKKFLNRLHYIPG-AVDSVMYNTLLAETCKSGNL 1420
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN--VFTC 188
AV F ++ + NV + ++LL L + + +F + + + PN ++TC
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
L+ L K + A +EM G P+ V I+ RG + A F +
Sbjct: 1481 --LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRW 1538
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P+ TY +L+ G+ K L + + M G+ P+++T+ +I K
Sbjct: 1539 WGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDL 1598
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
LL M+ + +I+ E GK+ A +L + PD + I +
Sbjct: 1599 GVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFN 1658
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K+ E+ + E E G IP Y TLI GMC ++ A +L D+M G
Sbjct: 1659 GLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGS 1718
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ + +++G G ++ + +L+ ML P +F+ L+ E K+
Sbjct: 1719 HEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLK 1778
Query: 488 SMATASG-SVESDSWNFLLTRIVSDLDSGAG 517
+ G ++ ++N L+ + ++ DS A
Sbjct: 1779 GVMELCGLKLDVVAYNVLIMGMCANGDSAAA 1809
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 34/274 (12%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FT NILI + + A +++ M ++G+ P+ T+ I G + + V +
Sbjct: 1616 FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 1675
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L+ G +P Y L++G ++G + A K+ DEME G +EV M+ K
Sbjct: 1676 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 1735
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ +A +LD ML+ + +P+ A ++ C + K+ +A +L K M
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL------KGVME------- 1782
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
LC G ++ YN LI GMC + + A L+++M + +
Sbjct: 1783 ----LC-----------------GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDL 1821
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
PN+ TY +L+ N +G ++L ++ ++G
Sbjct: 1822 CPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 207/421 (49%), Gaps = 10/421 (2%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
L A D V+ L E++ + C E+ + I + AG + A+KTF R +
Sbjct: 8 LPAAGDVDGVQYALQEMRLR-GVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66
Query: 148 -SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
VR N LL+AL++ V ++ N R K V PNV+T N+LI+ALC+ D V+ A +
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMR-KAGVDPNVYTYNLLIRALCQNDRVDAARK 125
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+LDEM G P+ V+H TI+ G G +E A+ + VP +Y ++
Sbjct: 126 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALC 180
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
R+ + V++EM G++PN VTY +++AFCK ++ A +L M+ P+
Sbjct: 181 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
++ E+GKV DA +W ++ + P + +I LC G + A F+
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300
Query: 387 ERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+R ++ P+ TY+TL+ G + +L A +W++M G +PNV Y +I CK
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 360
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFL 504
+ ++++ML C PN +F+ LI L + G G V +G +D ++N L
Sbjct: 361 DQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNEL 420
Query: 505 L 505
L
Sbjct: 421 L 421
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 219/483 (45%), Gaps = 60/483 (12%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN----PEIKCGENLFITVIRNYGLAGRPEL 132
N TY+ +I L + DA +L E+ + E+ G T++ GR E
Sbjct: 103 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHG-----TIVSGMCKLGRVEE 157
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTC 188
A + FL E VQ S N +++AL R + +V+ M + PNV T
Sbjct: 158 A-RGFL-AETVPVQAS---YNAVVHALCGEFRMWEVFSVVNEMVQRGLQ-----PNVVTY 207
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
++ A CK ++ A +L M SMG PN++T T ++ G+ G + +A ++ ++D
Sbjct: 208 TTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVD 267
Query: 249 RGW-----------------------------------VPDATTYTVLMDGYIKLGRLTD 273
GW +P+ATTY+ L+DG+ G L
Sbjct: 268 EGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDG 327
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ + +EM+ +G +PN V Y MI+ CK +A +L+D ML P++ +I
Sbjct: 328 AMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIG 387
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIP 392
LC+ G+V A ++ + R C P++ + ++H L +EG +A + E G
Sbjct: 388 RLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFEL 447
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
SL+TYNT+I +C+ A L M+ +G++P+ FT+N +I +CK G +L
Sbjct: 448 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 507
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+M C N ++++LI L G + ++ M +WN L+ I ++
Sbjct: 508 GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567
Query: 512 LDS 514
+ +
Sbjct: 568 IGT 570
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 49/370 (13%)
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTY 258
DV+G L EM G+ +G + G + A + F D G P Y
Sbjct: 13 DVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVY 72
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+D ++ + V V D M GV+PN TY ++I A C+ + AR +LD+M +
Sbjct: 73 NHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSR 132
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P ++ +C+ G+VE+A R +P A + ++H LC E ++WE
Sbjct: 133 KGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAVVHALCGEFRMWE 187
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT-------------------------- 411
+ +E +RG P+++TY T++ C++ EL
Sbjct: 188 VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 247
Query: 412 ---------EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+A +W MV++G P+ +YN+LI+G C IG+ K + M P
Sbjct: 248 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLP 307
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-----VESDSWNFLLTRIVSDLDSGAG 517
N T++S L++G +G+ + + +SG V ++ + L +++ D
Sbjct: 308 NATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMM--FDQAES 365
Query: 518 ALDELLVKNC 527
+D++L+ NC
Sbjct: 366 LIDKMLMDNC 375
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 221/428 (51%), Gaps = 6/428 (1%)
Query: 48 VSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN 107
+ +I R+++ AL IF+ + F HN TY +I+ KLAR F AV+ +L ++
Sbjct: 97 IDLIKREKDPQHALNIFNMVSE-QNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYE 155
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR-SVRSLNTLLNALVQNKRYD 166
K E +F+ +++++ + E + + I+ ++ S ++L+T LN L+ + R D
Sbjct: 156 T-CKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVD 214
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-PSMGMVPNLVTHTT 225
L + +++ PNV NIL+K CK D++ A +++EM S PNLVT++T
Sbjct: 215 LARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYST 274
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ G G ++ A +F +++ R VPD TY VL++G+ + G+ A V+ M+ N
Sbjct: 275 LMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSN 334
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G PN Y +++ CK K +A+ +L ++ P + +I+ LC GK ++A
Sbjct: 335 GCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEA 394
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
EL + + C D+ + ++ LC+EGK EA + ++ ++G + +Y ++
Sbjct: 395 IELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNS 454
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + EL A L M+ +G +P+ T N L+ CK G + L ++++ G P
Sbjct: 455 LTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPG 514
Query: 464 KTSFSLLI 471
++ +LI
Sbjct: 515 LETWEVLI 522
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 145/272 (53%), Gaps = 1/272 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ +TL++ L +N R +F+ + +VP+ T N+LI C+ + A V+
Sbjct: 271 TYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQF 330
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M S G PN+ ++ ++ G G +E+AK V +I G PDA TYT L++ + G+
Sbjct: 331 MKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGK 390
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+A+++++EM++NG + + VT+ V++ C+ K EA ++++ + Q+ +
Sbjct: 391 SDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRI 450
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK-KLFDEFERG 389
V++ L ++ +++ A EL +LR+ P A S+ ++ LCK G + +A LFD E G
Sbjct: 451 VLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMG 510
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
P L T+ LI +C +L L D++V
Sbjct: 511 FQPGLETWEVLIGLICRERKLLYVFELLDELV 542
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 110/211 (52%), Gaps = 3/211 (1%)
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSALCCKVIDLLCEEGKVEDAC 345
+PN + ++++ CK A ++++M ++ P+ ++D LC G+V++A
Sbjct: 230 KPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAF 289
Query: 346 ELWKRLL-RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAG 403
+L++ ++ R + +PD + +I+ C+ GK A+ + + G P++ Y+ L+ G
Sbjct: 290 DLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDG 349
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C+ +L +A + ++ G++P+ TY LI C+ G + E I +LEEM + GC +
Sbjct: 350 LCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQAD 409
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+F++L+ GL G E +V G
Sbjct: 410 SVTFNVLLGGLCREGKFEEALDMVEKLPQQG 440
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 223/448 (49%), Gaps = 13/448 (2%)
Query: 80 TYHSIIHKL-ARARAFDAVESL--LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
T+++++ L ++A+ DAV+ + ++ P++ + T+I G +A++
Sbjct: 12 TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVIT----YSTIINGLCKMGNTTMALQL 67
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++E+ + +V + NT++++L ++ R + F + K + P+VFT + ++ C
Sbjct: 68 LKKMEEKGCKPNVVAYNTIIDSLCKD-RLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
V A + +M ++PN VT T ++ G + I A VF + ++G PD
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+DGY ++ +A K+ + M+ G PN +Y ++I CK + EA+ LL +M
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++ C+ G+ ++A EL K + +P+ S ++ LCK G +
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA +L + I P++ Y LI GMC +L A L+ ++ KG++P V TY ++
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVM 366
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G K G + E + EM GC PN +++++I+G +G+ +++ G
Sbjct: 367 ISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG- 425
Query: 496 VESDSWNFLLTRIVSDLDSGAGALDELL 523
+DS F R++SDL+S + + +
Sbjct: 426 FSADSSTF---RMLSDLESSDEIISQFM 450
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 167/312 (53%), Gaps = 5/312 (1%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M +G+ P LVT T+L G + I +A ++F +++ G PD TY+ +++G K+G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
T A++++ +ME+ G +PN V Y +I++ CK + EA + +M++ P
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++ C G+V +A L+K+++ +N +P+ + +I LCK+ I EA +F+ E+G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + TYN L+ G C +++ EA +L++ M KG PNV +YN+LI G CK G E
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV 509
+L EM K P+ ++S L+ G + G E +++ + G + N + IV
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLP----NLITYSIV 296
Query: 510 SDLDSGAGALDE 521
D G LDE
Sbjct: 297 LDGLCKHGHLDE 308
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 177/339 (52%), Gaps = 4/339 (1%)
Query: 142 KFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
K +Q ++ + NTLL+ L + K D V L + K P+V T + +I LCK +
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLF--DEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
A+++L +M G PN+V + TI+ + A F +++ G PD TY+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G+ LGR+ +A + +M + V PN+VT+ ++I+ CK + EA + + M ++
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P ++D C ++++A +L+ + RK C P+ + +I+ CK G+I EAK
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L E S+ P + TY+TL+ G C+ EA L +M G+ PN+ TY++++ G
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK G+ E +L+ M + PN +++LIEG+ G
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFG 339
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 224/499 (44%), Gaps = 54/499 (10%)
Query: 41 RLYPKRLVSMIFRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVE 98
RL P +V +++R +N L L + G PNF H + ++IH L R+ R DA
Sbjct: 65 RLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQS 124
Query: 99 SLLTELKQNP----EI---------KCGEN--LFITVIRNYGLA---------------- 127
+L ++++ EI CG N +F +IR + A
Sbjct: 125 CVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSK 184
Query: 128 -------------------GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV 168
G ELA + + I + V +V +LN ++NAL ++ + + V
Sbjct: 185 GYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKV 244
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+ K V P++ T N LI A + +E A ++ MPS G P + T+ T++
Sbjct: 245 GTFLSEVQEK-GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVIN 303
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G G E AK VF ++L G PD+TTY L+ K G + + +M V P
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V + M+ F + +A + + + +P + + +I C +G + +A L
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+L++ C D +TI+H LCK + EA KLF+E ERG P T LI G C+
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L+ M EK ++ +V TYN L+ GF K+G+ I +M+ K P SF
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543
Query: 468 SLLIEGLYESGNEGEVGKV 486
S+L+ L G+ E +V
Sbjct: 544 SILVNALCSKGHLSEAFRV 562
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 231/451 (51%), Gaps = 13/451 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + L+S Q ++ A ++ H FS TY+++I+ L + ++
Sbjct: 257 YPDIVTYNTLISAYSSQGLMEEAFELMHAMPS--KGFSPGVYTYNTVINGLCKHGKYERA 314
Query: 98 ESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+ + E+ ++ P+ +L + + G A E F + +V + ++
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLLMEACKK-GDAVETE---NIFSDMRSRDVVPDLVCFSS 370
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+++ ++ D LM+ NS + ++P+ ILI+ C+K + A+ + +EM
Sbjct: 371 MMSLFTRSGNLDKA-LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ 429
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G ++VT+ TIL G R + A ++F ++ +RG PD+ T T+L+DG+ KLG L +A
Sbjct: 430 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNA 489
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+++ +M++ ++ + VTY +++ F K A+ + DM+ ++ +P+ +++
Sbjct: 490 MELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNA 549
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
LC +G + +A +W ++ K+ P I +++I C+ G + + ++ G +P
Sbjct: 550 LCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEK--GVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
++YNTLI G + +++A L M EK G+ P+VFTYN ++ GFC+ KE +
Sbjct: 610 CISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAV 669
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
L +M+++G P++++++ LI G N E
Sbjct: 670 LRKMIERGVNPDRSTYTSLINGFVSQDNLTE 700
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 139/283 (49%), Gaps = 4/283 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++I+H L + + + L E+ + L I +I + G + A++ F +
Sbjct: 437 TYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTI-LIDGHCKLGNLQNAMELFKK 495
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ ++ V + NTLL+ + D ++ + K +++P + +IL+ ALC K
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISFSILVNALCSKG 554
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A RV DEM S + P ++ +++ GY G+ + + ++ G+VPD +Y
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDN--GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ G++K ++ A ++ +ME+ G+ P+ TY ++ FC+ + EA +L M+
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+R P + +I+ + + +A +L++ PD+
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 216/417 (51%), Gaps = 7/417 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
F N TY ++I+ L + A LL ++Q C N+ F T+I + +
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG---NCQPNVVVFSTLIDSLCKDRQVT 227
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A F + + ++ + N+L++ L + + V + N K++P+VFT N +
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLM-NEMVDSKIMPDVFTLNTV 286
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ ALCK+ V A V+D M G+ PN+VT+ ++ G+ R +++ A +VF ++ +
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
V + +Y L++GY K+ + A+ + +EM + PN VTY +I C + +A +
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M+ R +P + D LC+ ++ A L K + N PD I +TI+ +C
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G++ +A+ LF +G P++ TYN +I G+C+ L EA +L+ +M + G PN
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
TYN++ +GF + A I +LEEML +G + ++ +LL+ L + G + V +++
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 183/365 (50%), Gaps = 2/365 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ TF R+ S N LL ++ + K + + L F + P+V+T I+I
Sbjct: 54 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTL-LSLSRQMDSFGIPPDVYTLAIVI 112
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+LC + V+ A L ++ +G P+ T TT++ G G I A +F ++ G+
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G + A++++ ME +PN V + +I++ CK ++ EA N+
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P+ +I LC+ + + L ++ MPD +T++ LCK
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + EA + D RG P+++TYN L+ G C E+ A +++D MV K NV +
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN LI G+CKI + + + + EEM + PN +++ LI GL G + +
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412
Query: 492 ASGSV 496
A G +
Sbjct: 413 ARGQI 417
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 195/394 (49%), Gaps = 2/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q +V +TL+++L ++++ +F K
Sbjct: 180 TLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITK 239
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PN+ T N LI LCK + + +++EM ++P++ T T++ G +
Sbjct: 240 -GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE 298
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V ++ RG P+ TY LMDG+ + AVKV D M N ++Y +I
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 358
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK + +A L ++M +++ P++ +I LC G+++DA L+ ++ + +P
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLW 417
D T+ +LCK + +A L E + P + Y T++ GMC + EL +A L+
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG++PNV+TYN++I G CK G E ++ EM GC PN +++L+ G +
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ A G S LL ++SD
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 572
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 153/311 (49%), Gaps = 6/311 (1%)
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+H T + ++ A F +L + P + L+ K + + + +M
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G+ P+ T ++I + C + A + L +L+ + P + +I LC EGK+
Sbjct: 97 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
+A L+ +++ + P+ T+I+ LCK G A +L E+G+ P+++ ++TL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ ++TEA ++ +M+ KG+ PN+ TYN LI G CK+ K ++ EM+D
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGA 516
P+ + + +++ L + G E VV M G VE + ++N L+ + +++D
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVAV 335
Query: 517 GALDELLVKNC 527
D ++ K+C
Sbjct: 336 KVFDTMVHKDC 346
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 212/408 (51%), Gaps = 17/408 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I+ L++ F+ + L+ E+ + +K + +I YG + LA L+
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTG-LKVSAYTYNPLI--YGYFNKGMLAEALSLQ 327
Query: 140 IEKF--NVQRSVRSLNTLLNALVQNKRY-----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
E +V + N+ + L + R L ++ N ++P+V + N LI
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------LLPDVVSYNTLI 381
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C+ ++ A + DE+ S+ + P +VT+ T+L G +G++E A+++ ++++ G
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TYT+L++G K+G L+ A + DEM G+E + Y I K + A +L
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++ML + + P + V+D LC+ G +E+A EL ++++ +PD ++IIH +
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561
Query: 373 EGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ + +++F E +G PS++TY LI G L A + +M EKG+ PNV T
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
YN LI G CK+ + EM++KG FPNK S+++LI GN
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 160/303 (52%), Gaps = 1/303 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K ++ P+V CN +++ L KD + A+ V M G+ P +VT+ T+L Y G ++
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+ ++ RG P+ TY VL++G K G A ++ EM G++ + TY +I
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLI 311
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ EA +L ++M+ + P+ A I LC+ G++ DA + +L N +
Sbjct: 312 YGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLL 371
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRL 416
PD +T+I+ C+ G + +A LFDE + P+++TYNTL+ G+C EL A +L
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+M+ +G+ P++ TY +L+ G CK+G+ +EML +G + +++ I G +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Query: 477 SGN 479
G+
Sbjct: 492 LGD 494
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+F + P + T N L+ + CK V+ + +L EM G PN VT+ ++ G +G+ E
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
AK + G++L G A TY L+ GY G L +A+ + +EM G P TY I
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFI 346
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + +A L DML +P +I C G + A L+ L
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P +T++ LC++G++ A++L + G P ++TY L+ G C+ L+ A
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+D+M+ +G+E + + Y I G K+G+ + EEML KG P+ ++++++GL +
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 477 SGNEGEVGKVVSMATASGSV 496
GN E +++ + G +
Sbjct: 527 LGNLEEASELLQKMVSDGVI 546
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 112/200 (56%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ N+++ LCK ++E A +L +M S G++P+ VT+T+I+ ++ G + + +
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L +G P TYTVL+ G+ GRL A EM++ G+ PN +TY +I CK
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A N +M+++ P+ +I+ C G ++A L+K++L + PD+
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691
Query: 363 SSTIIHWLCKEGKIWEAKKL 382
S ++ L K+ K+ ++L
Sbjct: 692 HSALLKQLGKDCKLQAVRQL 711
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I + K + ++ D M++ + P C +++ +L ++ + A E+++ +
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
P +T++ CK GK+ + L E + RG P+ +TYN LI G+ + E +A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L +M++ G++ + +TYN LI G+ G E + + EEM+ KG P +++ I G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 474 LYESGNEGEVGKVVS 488
L + G + + +S
Sbjct: 349 LCKLGRMSDAMQQLS 363
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+P+ T +I A + + + EM S G+ P++VT+T ++ G+ +G +E A
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
F ++ ++G +P+ TY L++G K+ R+ A EM + G+ PN+ +Y ++I
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
C EA +L ML R P S ++ L ++ K++ +L
Sbjct: 665 CNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 211/407 (51%), Gaps = 11/407 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
KPW + + L + ++ + AL +FH + F H+Y +Y S+I+KLA++R FD
Sbjct: 45 KPWEEVPFLTDLKEI----EDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFD 98
Query: 96 AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
AV+ +L L + ++C E+LF+ +I++YG AG + AV F ++ F+ R+++SLNTL
Sbjct: 99 AVDQIL-RLVRYRNVRCRESLFMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTL 157
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+N LV N + F ++ ++ PN + NILIK K D E A +V DEM M
Sbjct: 158 INVLVDNGELEKAKSFFDGAK-DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++VT+ +++G D+ A + D++ + P+A T+ +LM G G +A
Sbjct: 217 VQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAK 276
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+M +ME G +P V YGV++ K K EA+ LL +M +R+ P + +++ L
Sbjct: 277 KLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHL 336
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--ERGSIPS 393
C EG+V +A + K C P+ A I+ C+ G + + R S P+
Sbjct: 337 CTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHS-PT 395
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
T+ +++G+ + L A + + M +K + + L+ C
Sbjct: 396 PATFVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLLCDLC 442
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 193/398 (48%), Gaps = 6/398 (1%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTC 188
PE A+ F + ++ + S ++L+ L +++ +D V + + R++ + ++F
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMA 121
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K V+ A+ V ++ S V + + T++ V G++E AK F D
Sbjct: 122 --LIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
P++ ++ +L+ G++ A KV DEM + V+P+ VTY +I C+ G+
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGK 239
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +LL+DM++++ P++ ++ LC G+ +A +L + + C P ++
Sbjct: 240 ATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMS 299
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K GKI EAK L E ++ I P + YN L+ +C + EA R +M KG +P
Sbjct: 300 DLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKP 359
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TY M++ GFC+IG+ G+ +L ML P +F ++ GL + GN V+
Sbjct: 360 NAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVL 419
Query: 488 S-MATASGSVESDSW-NFLLTRIVSDLDSGAGALDELL 523
M S +W N L + D + AL E +
Sbjct: 420 EVMGKKKLSFGYSAWQNLLCDLCIKDGGAYCEALSEAI 457
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 142/300 (47%), Gaps = 10/300 (3%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV-KVMDEMEDNGVEPNEVTY 293
D E A +F + G+ D +Y+ L+ K R DAV +++ + V E +
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAK-SRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I+ + K +A ++ + V + +I++L + G++E A +
Sbjct: 120 MALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAK-KLFDE-FERGSIPSLLTYNTLIAGMCESAELT 411
P N++S I+ + WEA K+FDE E PS++TYN+LI +C + ++
Sbjct: 180 MRLRP-NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMG 238
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A L +DM++K + PN T+ +L++G C G E +++ +M +GC P ++ +L+
Sbjct: 239 KATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLM 298
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDS--WNFLLTRIVSD--LDSGAGALDELLVKNC 527
L + G E K++ ++ D +N L+ + ++ + L E+ +K C
Sbjct: 299 SDLGKRGKIDE-AKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGC 357
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 214/468 (45%), Gaps = 53/468 (11%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--- 127
+P FSH +Y S++H L R ESLL + ++F +++ G
Sbjct: 103 YPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSS 162
Query: 128 -------------GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
G A++ F +K N++ LL +++ +V L F
Sbjct: 163 FVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS-PMVALEFYL 221
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
PNV+T N+L+ LCK+ V+ A + DE+ G+ P V+ T++ GY G
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281
Query: 235 DIE-----------------------------------NAKRVFGDILDRGWVPDATTYT 259
++E +A +F ++ DRG VP+ T+T
Sbjct: 282 NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFT 341
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G K GR+ A+++ +M G++ + V Y +I+ CKG EAR + +M +R
Sbjct: 342 TLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKR 401
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P ++D C+EG +E A E+ K ++++ DN + II LC++GKI +A
Sbjct: 402 GLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDA 461
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++ E R + P TY ++ G C+ ++ +L +M G P V TYN+L+ G
Sbjct: 462 ERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNG 521
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
CK G K +L ML+ G P+ ++++L++G + G G+ V
Sbjct: 522 LCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNV 569
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 182/400 (45%), Gaps = 45/400 (11%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+R++ M L+ L+I + N T++ ++++L + + + E+
Sbjct: 205 ERMIKMSSPMVALEFYLEILD------SGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
++ ++ F T+I Y +G E + + +E+F V V + + L++ L + +
Sbjct: 259 RKTG-LQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQ 317
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ + +FK + +VPN T LI CK V+ A+ + +M + G+ +LV +
Sbjct: 318 LEDANHLFKEMCDR-GLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYN 376
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG--------------- 269
T++ G G A++ G++ RG +PD TYT L+DG K G
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKE 436
Query: 270 --------------------RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
++ DA + + EM G++P++ TY ++++ FCK
Sbjct: 437 GIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMG 496
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LL +M ++P +++ LC++G+V++A L +L +PD+ + ++
Sbjct: 497 FKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAE 409
CK GK+ + + + + E G + +Y +L+ + ++++
Sbjct: 557 HCKHGKLGDFQNV--KTEMGLVSDYASYRSLLHELSKASK 594
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 12/291 (4%)
Query: 216 MVPNLVTH------TTILGGYVWRGDIENAKRVFGDILD-RGWVPDATTYTVLMDGYIKL 268
MV L+ H ++L V R +A VF IL+ +G + + + LM Y +
Sbjct: 116 MVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEF 175
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G ++DA++ + + ++ ++E K A ++L Y P+
Sbjct: 176 GYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTF 235
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA---KKLFDE 385
+++ LC+EGKV+DA ++ + + P +T+I+ CK G + E K + +E
Sbjct: 236 NVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEE 295
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
F P + TY+ LI G+C+ +L +A L+ +M ++G+ PN T+ LI G CK G
Sbjct: 296 FR--VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRV 353
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ I ++M KG + ++ LI+GL + G E K V T G +
Sbjct: 354 DLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLI 404
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 201/429 (46%), Gaps = 30/429 (6%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLAGRPE 131
FSH ++ ++ L RAR + + L E + N +K + F ++IR+YG AG +
Sbjct: 96 FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQ 155
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+VK F +++ + SV + N+LL+ L++ R + H +F R + V P+ +T N L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMV------------------PNLVTHTTILGGYVWR 233
I CK V+ A R+ +M G V PN+V++TT++ GY +
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 275
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED--NGVEPNEV 291
+I+ A VF D+L RG P+A TY L+ G + R + ++ D P+
Sbjct: 276 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 335
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T+ ++I+A C A + +ML K P SA +I LC + + A L+ L
Sbjct: 336 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 395
Query: 352 LRK-------NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGM 404
K C P A + + +LC GK +A+K+F + + + +Y TLI G
Sbjct: 396 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGH 455
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + A L M+ + P++ TY +LI G KIG A L+ ML P
Sbjct: 456 CREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 515
Query: 465 TSF-SLLIE 472
T+F S+L E
Sbjct: 516 TTFHSVLAE 524
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/552 (21%), Positives = 232/552 (42%), Gaps = 67/552 (12%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPW---PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH 71
L++S G A ++ + +K P L L+S++ ++ +A +F + +
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--------------- 116
+Y T++++I+ + D + +++ ++K N+
Sbjct: 204 GVTPDSY-TFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNV 262
Query: 117 --FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ T++R Y + + AV F + ++ + + NTL+ L + RYD + +
Sbjct: 263 VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIG 322
Query: 175 SRHKFKV-VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
F P+ T NILIKA C ++ A++V EM +M + P+ +++ ++ R
Sbjct: 323 GNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMR 382
Query: 234 GDIENAKRVFGDILDRGWV-------PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ + A+ +F ++ ++ + P A Y + + G+ A KV ++ GV
Sbjct: 383 NEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV 442
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+ + +Y +I C+ K A LL ML+R++VP +ID L + G+ A +
Sbjct: 443 Q-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 501
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCK---------------EGKIWE--------AKKLF 383
+R+LR + +P +++ L K E +I + + LF
Sbjct: 502 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLF 561
Query: 384 D--EFERGSIPSLLTYNT--------LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ E+ + L Y+ L+ +CE+ +L +A L +EK ++ T N
Sbjct: 562 SSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCN 621
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATA 492
+I+G CK E + E+++ G + +L L +G E+ V MAT
Sbjct: 622 TVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATL 681
Query: 493 SGSVESDSWNFL 504
ESD + L
Sbjct: 682 R---ESDDCSVL 690
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 35/245 (14%)
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM---------LQRKYV 322
D ++ D + + G E ++ +M+E + + ARN L + LQ +Y
Sbjct: 82 ADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYF 141
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
S +I G +++ +L++ + + P ++++ L K G+ A L
Sbjct: 142 NS------LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 383 FDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG---------------- 424
FDE R G P T+NTLI G C+++ + EA R++ DM G
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKA 255
Query: 425 --VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
V PNV +Y L++G+C E + + +ML +G PN +++ LI+GL E+ E
Sbjct: 256 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE 315
Query: 483 VGKVV 487
+ ++
Sbjct: 316 IKDIL 320
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ Y G + + ++F + G P T+ L+ +K GR A + DEM
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 285 -GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
GV P+ T+ +I FCK EA + DM +L GKV+
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM----------------EL---AGKVKI 243
Query: 344 ACELWKRLLRK--NCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTL 400
A + +L+K + P+ +T++ C + +I EA +F D RG P+ +TYNTL
Sbjct: 244 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 303
Query: 401 IAGMCESAELTEAGRLWDDMVEKG------VEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
I G+ E+ E D++ G P+ T+N+LI+ C G+ +++ +E
Sbjct: 304 IKGLSEAHRYDEI----KDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 359
Query: 455 MLDKGCFPNKTSFSLLIEGL 474
ML+ P+ S+S+LI L
Sbjct: 360 MLNMKLHPDSASYSVLIRTL 379
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 203/397 (51%), Gaps = 12/397 (3%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ R D V SL ++++ +I+C F +I+ + + A+ TF +I K +
Sbjct: 89 VVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 148 SVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V + NTLL+ L R +L H MF+ + PNV T L+ LC++ +
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR-----PNVVTFTTLMNGLCREGRIVE 202
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD-RGWVPDATTYTVLM 262
A+ +LD M G+ P +T+ TI+ G GD +A + + + +P+ Y+ ++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAII 262
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K GR +DA + EM++ G+ P+ TY MI FC + +A LL +ML+RK
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I+ +EGK +A EL+ +L + +P+ S++I CK+ ++ A+ +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F +G P+L+T+NTLI G C + + + L +M E G+ + TYN LI GF
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G+ + +L+EM+ G P+ + L++GL ++G
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 206/412 (50%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I+ + + + LL ++++ I ++ +I + GR A F
Sbjct: 221 TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ + + + N+++ + R+ + + + K+ P+V T N LI A K+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEG 339
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+++++ G+ + ++ A+ +F + +G P+ T+
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM + G+ + TY +I F A +LL +M+
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++D M K P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+ LI G+CK G +G+ + EM +G N ++ LI G + GN
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 202/381 (53%), Gaps = 6/381 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV L+ +V+ +R DLV +++ K ++ ++++ ILIK C + A+
Sbjct: 78 SVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ +G+ P++VT T+L G + A +F + + P+ T+T LM+G +
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSA 326
GR+ +AV ++D M ++G++P ++TYG +++ CK + A +LL M + + +P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +ID LC++G+ DA L+ + K PD +++I C G+ +A++L E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
ER P ++TYN LI + + EA L+D+M+ +G+ PN TY+ +I GFCK
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFL 504
+ M KGC PN +F+ LI+G + + +++ T +G V ++ ++N L
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 505 LT--RIVSDLDSGAGALDELL 523
+ +V DL++ L E++
Sbjct: 437 IHGFYLVGDLNAALDLLQEMI 457
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 209/427 (48%), Gaps = 21/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N Y +II L + ++L TE+++ +LF ++I + +GR A
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP---DLFTYNSMIVGFCSSGRWSDAE 310
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + + V + N L+NA V+ ++ ++ + ++PN T + +I
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDG 369
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK++ ++ A + M + G PNL+T T++ GY I++ + ++ + G V D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TTY L+ G+ +G L A+ ++ EM +G+ P+ VT +++ C K +A +
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 315 DMLQRK-----------YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
M + K P +I L EGK +A EL++ + + +PD
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S++I LCK+ ++ EA ++FD S P+++T+ TLI G C++ + + L+ +M
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G+ N TY LI GF K+GN + I +EM+ G +P+ + ++ GL+ ++ E
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW---SKEE 666
Query: 483 VGKVVSM 489
+ + V+M
Sbjct: 667 LKRAVAM 673
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 211/456 (46%), Gaps = 24/456 (5%)
Query: 57 LDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
L AL F K HP+ T+++++H L D V L Q E C
Sbjct: 130 LPFALSTFGKITKLGLHPDVV----TFNTLLHGLCVE---DRVSEALNLFHQMFETTCRP 182
Query: 115 NL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
N+ F T++ GR AV R+ + +Q + + T+++ + + +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ ++PNV + +I +LCK A + EM G+ P+L T+ +++ G+
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G +A+++ ++L+R PD TY L++ ++K G+ +A ++ DEM G+ PN +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y MI+ FCK + A ++ M + P+ +ID C +++D EL +
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
+ D +T+IH G + A L E G P ++T +TL+ G+C++ +L
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 412 EAGRLWDDMVEK-----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+A ++ M + GVEP+V TYN+LI G G E + EEM +G
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGS 495
P+ ++S +I+GL + E ++ SM + S S
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS 578
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I + + E LL E+ K +P++ L ++ EL +
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R + + + +++++ + R D MF K PN+ T N LI C
Sbjct: 352 LPR----GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK-GCSPNLITFNTLIDGYC 406
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + +L EM G+V + T+ T++ G+ GD+ A + +++ G PD
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ TY ++I K
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+ +T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ CK G++ + +LF E RG + + +TY TLI G + + A ++ +M+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ G K + +LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 72/311 (23%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +F D+L +P + LM +++ R + + +ME + + ++ +
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119
Query: 296 MIEAFCKGKK-----------------------------------SGEARNLLDDMLQRK 320
+I+ FC K EA NL M +
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKR------------------------------ 350
P+ +++ LC EG++ +A L R
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239
Query: 351 -LLRK-----NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
LLRK + +P+ I S II LCK+G+ +A+ LF E E+G P L TYN++I G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C S ++A +L +M+E+ + P+V TYN LI F K G E + +EML +G PN
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 464 KTSFSLLIEGL 474
++S +I+G
Sbjct: 360 TITYSSMIDGF 370
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 135/297 (45%), Gaps = 13/297 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ +Q LD A +F+ S N T++++I A+ D
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
LL E+ + + + T+I + L G A+ + + + + +TLL+
Sbjct: 416 ELLHEMTETGLVA-DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 159 LVQNKRYDLVHLMFK---------NSRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVL 208
L N + MFK ++ H F V P+V T NILI L + A +
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EMP G+VP+ +T+++++ G + ++ A ++F + + + P+ T+T L++GY K
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
GR+ D +++ EM G+ N +TY +I F K A ++ +M+ P +
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 31/331 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY S+I + DA E + + C NL F T+I Y A R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATK---GCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + + + NTL++ N DL+ M + + P++ TC+
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-----LCPDIVTCDT 470
Query: 191 LIKALCKKDDVEGAIRVLDEM-----------PSMGMVPNLVTHTTILGGYVWRGDIENA 239
L+ LC ++ A+ + M P G+ P++ T+ ++ G + G A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ ++ RG VPD TY+ ++DG K RL +A ++ D M PN VT+ +I
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC---EEGKVEDACELWKRLLRKNC 356
+CK + + L +M +R V ++ I L+C + G + A ++++ ++
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAI---TYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
PD ++ L + ++ A + ++ +
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 187/366 (51%), Gaps = 6/366 (1%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ +V + N LL L + R+D +F+ K P+ FT IL++ LC+ + +E A
Sbjct: 4 EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDK-SCQPDAFTFAILLRGLCRSNQLEKAR 62
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
++L M MG VP+ + ++ GY D A + +++ +P TYT ++DG
Sbjct: 63 KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K R DAVK++DEM D G PN TY V++E C+ +K EA+ +L++M R Y P
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDV 182
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
I LC+ +V++A K L R PD +T+I+ LCK G + A ++ D
Sbjct: 183 VTYNSFIKGLCKCDRVDEA---RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDH 239
Query: 386 FE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
RG P ++TY++LI G C+ E+ A L D M++ G PN+ YN L+ ++G+
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNF 503
+ +L EM +G P+ S++ I+GL ++ + V G + S++
Sbjct: 300 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359
Query: 504 LLTRIV 509
L+ I+
Sbjct: 360 LIVDIL 365
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 204/409 (49%), Gaps = 22/409 (5%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL--AVKT 136
TY +I+ L +A R DAV+ LL E++ C N++ + GL +L A K
Sbjct: 114 TYTNIVDGLCKAERTRDAVK-LLDEMRDK---GCSPNIYTYNVIVEGLCEERKLDEAKKM 169
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ V + N+ + L + R D + V P+V + +I LC
Sbjct: 170 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA----RMPVTPDVVSYTTVINGLC 225
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K D++ A R+LD M + G P++VT+++++ G+ G++E A + +L G P+
Sbjct: 226 KSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 285
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+ +LG + A ++ EME G P+ V+Y I+ CK ++ +A+ + D M
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 345
Query: 317 LQRKYVPSSA----------LCCKVIDLLCEEGKVEDACELWKRLL-RKNCMPDNAISST 365
++R P+++ L ++D LC+ G+ ++AC L+ ++L K C PD +
Sbjct: 346 VERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNV 405
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
++ CK +I +A ++ + + +++T+N L+ G+C L++A + MV++G
Sbjct: 406 MLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 465
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
P+ TY L+ CK G + + + EE + GC P+ ++S LI GL
Sbjct: 466 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 514
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 217/447 (48%), Gaps = 25/447 (5%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y+++I ++A+ F L E+ +N P + + ++ A R AVK
Sbjct: 80 YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVV----TYTNIVDGLCKAERTRDAVKLL 135
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + N ++ L + ++ D M + + P+V T N IK LCK
Sbjct: 136 DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR-GYFPDVVTYNSFIKGLCK 194
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D V+ A + L MP + P++V++TT++ G GD+++A R+ + +RG PD T
Sbjct: 195 CDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVT 251
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ L+DG+ K G + A+ ++D M G PN V Y ++ A + G+A ++L +M
Sbjct: 252 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 311
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII---------- 367
+R + P ID LC+ +V+ A ++ R++ + C P+ + S +I
Sbjct: 312 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLL 371
Query: 368 HWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
LCK G+ EA LF + E+ P + YN ++ C+ ++ +A ++ M+EK
Sbjct: 372 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC 431
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
NV T+N+L+ G C + +L M+D+G P+ ++ L++ + + G +
Sbjct: 432 -CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 490
Query: 486 VVSMATASGSV-ESDSWNFLLTRIVSD 511
+ A G V + +++ L+T +V +
Sbjct: 491 LFEEAVKGGCVPDVVTYSALITGLVHE 517
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 204/452 (45%), Gaps = 21/452 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPE 131
+ HN TY+ ++ +L R D ++ E+ C + F I GL + + E
Sbjct: 3 YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDK---SCQPDAFTFAILLRGLCRSNQLE 59
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K R+++ N L++ + K + F K +P V T +
Sbjct: 60 KARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA-FKFLAEMVKNHCLPTVVTYTNI 118
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ LCK + A+++LDEM G PN+ T+ I+ G ++ AK++ ++ RG+
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY + G K R+ +A K + M V P+ V+Y +I CK A
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASR 235
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+LD M R P +ID C+ G+VE A L +L+ C P+ ++++ L
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G I +A+ + E E RG P +++YN I G+C++ + +A ++D MVE+G PN
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355
Query: 431 TYNMLI----------QGFCKIGNAKEGIRILEEMLD-KGCFPNKTSFSLLIEGLYESGN 479
+Y+MLI G CK G E + ++LD K C P+ ++++++ +
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415
Query: 480 EGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+ ++ +WN L+ + D
Sbjct: 416 IDKALQIHKQMLEKNCCNVVTWNILVHGLCVD 447
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 196/412 (47%), Gaps = 26/412 (6%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPE 131
S N TY+ I+ L R D + +L E+ P++ + + I+ R +
Sbjct: 144 SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV----TYNSFIKGLCKCDRVD 199
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K R+ V V S T++N L ++ D M + ++ P+V T + L
Sbjct: 200 EARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNR-GCTPDVVTYSSL 255
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK +VE A+ +LD M +G PN+V + ++LG G I A+ + ++ RG+
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG----------VMIEAFC 301
PD +Y +DG K R+ A V D M + G PN +Y V+++ C
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375
Query: 302 KGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
KG + EA L +L K P ++D C+ +++ A ++ K++L KNC N
Sbjct: 376 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC--N 433
Query: 361 AIS-STIIHWLCKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
++ + ++H LC + ++ +A+ L + G IP +TY TL+ MC+ + A L++
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ V+ G P+V TY+ LI G A+E + +++++ P+ + LL
Sbjct: 494 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 68/301 (22%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC-------- 301
G+ + TY L+ + R A V EM D +P+ T+ +++ C
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 302 ---------------------------KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
K K G+A L +M++ +P+ ++D
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
LC+ + DA +L + K C P+ + I+ LC+E K+ EAKK+ +E RG P
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 394 LLTYN--------------------------------TLIAGMCESAELTEAGRLWDDMV 421
++TYN T+I G+C+S +L A R+ D M
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+G P+V TY+ LI GFCK G + + +L+ ML GC PN +++ L+ L+ G+ G
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301
Query: 482 E 482
+
Sbjct: 302 K 302
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 216/417 (51%), Gaps = 7/417 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
F N TY ++I+ L + A LL ++Q C N+ F T+I + +
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG---NCQPNVVVFSTLIDSLCKDRQVT 227
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A F + + ++ + N+L++ L + + V + N K++P+VFT N +
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLM-NEMVDSKIMPDVFTLNTV 286
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ ALCK+ V A V+D M G+ PN+VT+ ++ G+ R +++ A +VF ++ +
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
V + +Y L++GY K+ + A+ + +EM + PN VTY +I C + +A +
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M+ R +P + D LC+ ++ A L K + N PD I +TI+ +C
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G++ +A+ LF +G P++ TYN +I G+C+ L EA +L+ +M + G PN
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
TYN++ +GF + A I +LEEML +G + ++ +LL+ L + G + V +++
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 183/365 (50%), Gaps = 2/365 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ TF R+ S N LL ++ + K + + L F + P+V+T I+I
Sbjct: 54 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTL-LSLSRQMDSFGIPPDVYTLAIVI 112
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+LC + V+ A L ++ +G P+ T TT++ G G I A +F ++ G+
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G + A++++ ME +PN V + +I++ CK ++ EA N+
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P+ +I LC+ + + L ++ MPD +T++ LCK
Sbjct: 233 FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK 292
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + EA + D RG P+++TYN L+ G C E+ A +++D MV K NV +
Sbjct: 293 EGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN LI G+CKI + + + + EEM + PN +++ LI GL G + +
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412
Query: 492 ASGSV 496
A G +
Sbjct: 413 ARGQI 417
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 195/394 (49%), Gaps = 2/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q +V +TL+++L ++++ +F K
Sbjct: 180 TLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITK 239
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PN+ T N LI LCK + + +++EM ++P++ T T++ G +
Sbjct: 240 -GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE 298
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V ++ RG P+ TY LMDG+ + AVKV D M N ++Y +I
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 358
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK + +A L ++M +++ P++ +I LC G+++DA L+ ++ + +P
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLW 417
D T+ +LCK + +A L E + P + Y T++ GMC + EL +A L+
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG++PNV+TYN++I G CK G E ++ EM GC PN +++L+ G +
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ A G S LL ++SD
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 572
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 153/311 (49%), Gaps = 6/311 (1%)
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+H T + ++ A F +L + P + L+ K + + + +M
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G+ P+ T ++I + C + A + L +L+ + P + +I LC EGK+
Sbjct: 97 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
+A L+ +++ + P+ T+I+ LCK G A +L E+G+ P+++ ++TL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ ++TEA ++ +M+ KG+ PN+ TYN LI G CK+ K ++ EM+D
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGA 516
P+ + + +++ L + G E VV M G VE + ++N L+ + +++D
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVAV 335
Query: 517 GALDELLVKNC 527
D ++ K+C
Sbjct: 336 KVFDTMVHKDC 346
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 200/399 (50%), Gaps = 11/399 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+ + + +LA A D V+ L E++ + C E + + + AG P+ A+KTF R
Sbjct: 63 AHEAAVRRLAAAGDVDGVQLELQEMRLR-GVPCTEGALVAAVGAFARAGAPDRALKTFYR 121
Query: 140 -IEKFNVQRSV--RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ R R N L++AL++ V L+ N R K V PNVFT N+L++ALC
Sbjct: 122 AVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMR-KDGVQPNVFTYNLLVRALC 180
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ V A ++LDEM + G P+ VT+ TI+ G ++ A V P A
Sbjct: 181 QNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS-----AAPPVAA 235
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y ++ + R+ + V+ +M G++PN +TY ++ AFCK + A +L M
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P+ A ++ L +G+V DA ++WK ++ + P + +I LC G +
Sbjct: 296 VITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDL 355
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A + ++ E+ G P+ TY+TLI G ++ +L A +W+DM G +PNV Y +
Sbjct: 356 KGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNM 415
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ FCK + ++++ML + C PN +F+ LI L
Sbjct: 416 VGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSL 454
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 4/302 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T ++ A CK ++ A +L M G PN+ T T ++GG G + +A +
Sbjct: 267 PNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDM 326
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ ++ GW P +Y VL+ G +G L A V+++ME +G PN TY +I+ F K
Sbjct: 327 WKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSK 386
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A ++ +DM + P+ + ++ + C++ A L ++L +NC P+
Sbjct: 387 AGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVT 446
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I LC ++ A +F E R G P+ TYN L+ G+ +A ++ +M
Sbjct: 447 FNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQ 506
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G+E ++ TYN ++ G C++ +E + + M+ +G P+ +F+ +I + EG
Sbjct: 507 NHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCK---EG 563
Query: 482 EV 483
EV
Sbjct: 564 EV 565
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 166/380 (43%), Gaps = 51/380 (13%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA-KRVFGDILDRG 250
++ L DV+G L EM G+ +G + G + A K + + D G
Sbjct: 68 VRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 127
Query: 251 WV-PDATT-YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
P A Y L+D ++ + V M +GV+PN TY +++ A C+ + G
Sbjct: 128 CARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGA 187
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
AR +LD+M + P ++ LC G+V++A E+ P A + +I
Sbjct: 188 ARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNAVIL 242
Query: 369 WLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEA-------------- 413
LC+E ++ E + D RG P+++TY T++ C++ EL A
Sbjct: 243 ALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTP 302
Query: 414 ---------------GR------LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
GR +W MV +G P+ +YN+LI+G C +G+ K +L
Sbjct: 303 NVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVL 362
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-----VESDSWNFLLTR 507
+M GCFPN ++S LI+G ++G+ + + T SG V ++ +
Sbjct: 363 NDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKK 422
Query: 508 IVSDLDSGAGALDELLVKNC 527
++ + +D++LV+NC
Sbjct: 423 LM--FNQAESLIDKMLVENC 440
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 154/358 (43%), Gaps = 37/358 (10%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T++ + AG +A R+ +V + L+ L + R M+K
Sbjct: 272 YTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMV 331
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ P+ + N+LI+ LC D++GA VL++M G PN T++T++ G+ GD+
Sbjct: 332 AE-GWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDL 390
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A ++ D+ G P+ YT ++ + K A ++D+M PN VT+ +
Sbjct: 391 DGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTL 450
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW-------- 348
I + C ++ G A + +M + P+ +++ L EG DA ++
Sbjct: 451 IRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510
Query: 349 ---------------------------KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
R++ + PD + IIH CKEG++ A
Sbjct: 511 ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAW 570
Query: 382 LFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ + ++L Y L+A +C +L +A M+ +G+ PN T+N+L++G
Sbjct: 571 ILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ + R+ +TL++ + D + N + PNV ++ CKK
Sbjct: 365 MEQHGCFPNARTYSTLIDGFSKAGDLDGA-ISIWNDMTRSGCKPNVVVYTNMVGVFCKKL 423
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A ++D+M PN VT T++ + A VF ++ G P+ TY
Sbjct: 424 MFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYN 483
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G + G DA++++ EM+++G+E + VTY ++ C+ + EA + M+ R
Sbjct: 484 ELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVR 543
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P + +I C+EG+V A + + NC + + + ++ LC + K+ +A
Sbjct: 544 GIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDA 603
Query: 380 K-KLFDEFERGSIPSLLTYNTLIAGM 404
L G P+ +T+N L+ G+
Sbjct: 604 MVYLLKMLYEGIYPNTVTWNVLVRGV 629
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGR 129
N N T++++I L R + E++++ P + L + R G
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFRE----GN 494
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
A++ + ++ ++ S+ + NT+++ L Q R + F + P+ FT
Sbjct: 495 CGDALQMVIEMQNHGIELSLVTYNTVVSGLCQ-MRMGREAMFFVGRMIVRGIQPDAFTFT 553
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+I A CK+ +V A +L M + N++ +T ++ + +E+A +L
Sbjct: 554 AIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYE 613
Query: 250 GWVPDATTYTVLMDGYIK 267
G P+ T+ VL+ G +
Sbjct: 614 GIYPNTVTWNVLVRGVFR 631
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 210/400 (52%), Gaps = 17/400 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I+ L++ F+ + L+ E+ + +K + +I YG + LA L+
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTG-LKVSAYTYNPLI--YGYFNKGMLAEALSLQ 327
Query: 140 IEKF--NVQRSVRSLNTLLNALVQNKRY-----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
E +V + N+ + L + R L ++ N ++P+V + N LI
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------LLPDVVSYNTLI 381
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C+ ++ A + DE+ S+ + P +VT+ T+L G +G++E A+++ ++++ G
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TYT+L++G K+G L+ A + DEM G+E + Y I K + A +L
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++ML + + P + V+D LC+ G +E+A EL ++++ +PD ++IIH +
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561
Query: 373 EGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ + +++F E +G PS++TY LI G L A + +M EKG+ PNV T
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
YN LI G CK+ + EM++KG FPNK S+++LI
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 160/303 (52%), Gaps = 1/303 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K ++ P+V CN +++ L KD + A+ V M G+ P +VT+ T+L Y G ++
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+ ++ RG P+ TY VL++G K G A ++ EM G++ + TY +I
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLI 311
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ EA +L ++M+ + P+ A I LC+ G++ DA + +L N +
Sbjct: 312 YGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLL 371
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRL 416
PD +T+I+ C+ G + +A LFDE + P+++TYNTL+ G+C EL A +L
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+M+ +G+ P++ TY +L+ G CK+G+ +EML +G + +++ I G +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Query: 477 SGN 479
G+
Sbjct: 492 LGD 494
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+F + P + T N L+ + CK V+ + +L EM G PN VT+ ++ G +G+ E
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
AK + G++L G A TY L+ GY G L +A+ + +EM G P TY I
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFI 346
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + +A L DML +P +I C G + A L+ L
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P +T++ LC++G++ A++L E G P ++TY L+ G C+ L+ A
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+D+M+ +G+E + + Y I G K+G+ + EEML KG P+ ++++++GL +
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 477 SGNEGEVGKVVSMATASGSV 496
GN E +++ + G +
Sbjct: 527 LGNLEEASELLQKMVSDGVI 546
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 109/194 (56%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ N+++ LCK ++E A +L +M S G++P+ VT+T+I+ ++ G + + +
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L +G P TYTVL+ G+ GRL A EM++ G+ PN +TY +I CK
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A N +M+++ P+ +I+ C G ++A L+K++L + PD+
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691
Query: 363 SSTIIHWLCKEGKI 376
S ++ L K+ K+
Sbjct: 692 HSALLKQLGKDCKL 705
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I + K + ++ D M++ + P C +++ +L ++ + A E+++ +
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
P +T++ CK GK+ + L E + RG P+ +TYN LI G+ + E +A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L +M++ G++ + +TYN LI G+ G E + + EEM+ KG P +++ I G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 474 LYESG 478
L + G
Sbjct: 349 LCKLG 353
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+P+ T +I A + + + EM S G+ P++VT+T ++ G+ +G +E A
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
F ++ ++G +P+ TY L++G K+ R+ A EM + G+ PN+ +Y ++I
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
C EA +L ML R P S ++ L ++ K++
Sbjct: 665 CNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 221/452 (48%), Gaps = 13/452 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+IH L +A D LL E++ I G + VIR AGR A+
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG-IPPGVAVHNGVIRGLCKAGRFGDALGY 87
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + N L++ALV++ R + +F++ + +PNV T +I LC
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ AI +LD M G PN++T++ ++ G G + + ++ RG+ PD
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++G K RL +A++++ M +G P VTY ++E FC+ K+ A L+ M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+R P VI LC + +++DA L K+++ C+PD STII LCK+ ++
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 377 ---WEAKKLFDEFE----RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
W+ + + E G P+ TY +I G+C + + +A L M++ V P++
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+++M+I CK + +I M ++ C PN +++ LI+GL + G + +V +
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 490 ATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
S ++N +L D G G ++E
Sbjct: 448 MVESFRPGVATYNSVL-----DGLCGVGRIEE 474
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 5 LHQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIF 64
+H + C G A T+ T K P + LV + + ++ A QIF
Sbjct: 67 VHNGVIRGLCKAGRFGDALGYFKTVAGT---KCTPDIITFNILVDALVKSGRVEEAFQIF 123
Query: 65 ---HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
H + + PN TY ++I+ L + D LL + E C N+ +
Sbjct: 124 ESMHTSSQCLPNVV----TYTTVINGLCKDGKLDRAIELLDLMN---ETGCCPNVITYSV 176
Query: 122 RNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNS 175
GL AGR + + + Q V NTLLN L +++R D LV LM ++
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ P V T N L++ C+ V+ A R++ M G P+++ + T++ G
Sbjct: 237 CY-----PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR------LTDAVKVMDEMEDNGVEPN 289
+++A+ + ++ VPD TY+ ++DG K R L A ++++ M+ G PN
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
TY V+IE C+ +KS +A LL M+ + VP + VI LC+ ++ A +++
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFG 411
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAE 409
+ + C P+ + +I L K G++ +A ++F+ P + TYN+++ G+C
Sbjct: 412 MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGR 471
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ EA R+ + M+ K P+ +Y LI+G C++ +E + + + KG
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 47/366 (12%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+N LN LV+ ++ +F+ R VPN FT LI LCK ++ A +LDEM
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREER----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ P + H ++ G G +A F + PD T+ +L+D +K GR+
Sbjct: 57 RDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 272 TD------------------------------------AVKVMDEMEDNGVEPNEVTYGV 295
+ A++++D M + G PN +TY V
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++E CK ++ + LL +M +R + P + +++ LC+ ++++A EL + ++R
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C P ++++ C+ ++ A +L ERG P ++ YNT+IAG+C A L +A
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA------KEGIRILEEMLDKGCFPNKTSFS 468
L MV P+V TY+ +I G CK + ILE M GC PN +++
Sbjct: 297 ALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356
Query: 469 LLIEGL 474
++IEGL
Sbjct: 357 VVIEGL 362
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 5/231 (2%)
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
++ G+ AV++ E PNE TYG +I CK K +A LLD+M R P
Sbjct: 9 VRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGV 65
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
A+ VI LC+ G+ DA +K + C PD + ++ L K G++ EA ++F+
Sbjct: 66 AVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFES 125
Query: 386 FERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
S +P+++TY T+I G+C+ +L A L D M E G PNV TY++L++G CK G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G +L+EM +G P+ ++ L+ GL +S E ++V + SG
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 159/353 (45%), Gaps = 23/353 (6%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ + + + LD AL++ TY+S++ R++ D
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLM--IRSGCYPTVVTYNSLMELFCRSKQVDRAF 261
Query: 99 SLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L+ + E C ++ + TVI R + A ++ V + +T++
Sbjct: 262 RLIQVMS---ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Query: 157 NALVQNKRYD----------LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ L ++ R D ++ +M + PN T ++I+ LC+ + A+
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTG-----CPPNAGTYAVVIEGLCRARKSQQALA 373
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+L M +VP+L + + ++G D++ A ++FG + +R P+ Y L+DG
Sbjct: 374 LLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLS 433
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K G + AV+V + M ++ P TY +++ C + EA +++ M+ ++ P A
Sbjct: 434 KGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+I LC VE+A EL++ + K + + + +++ LCK+ ++ +A
Sbjct: 493 SYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 149/321 (46%), Gaps = 11/321 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFH-YAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
+P + L+ + R + +D A ++ + + P NY+T +I L R D
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT---VIAGLCRDARLDD 294
Query: 97 VESLLTEL---KQNPEIKCGENLFITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVRS 151
++LL ++ + P++ + + +++ + + E A + +++ + +
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
++ L + ++ + + +VVP++ + +++I +LCK D++ A ++ M
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDS-EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
PN V + ++ G G+++ A RVF +++ + P TY ++DG +GR+
Sbjct: 414 SERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRI 472
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+AV++++ M P+ +YG +I C+ EA L + + + + +
Sbjct: 473 EEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVL 532
Query: 332 IDLLCEEGKVEDACELWKRLL 352
++ LC++ ++ DA + +L+
Sbjct: 533 VNELCKKKRLSDAHGVANKLI 553
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
++ L + G+ +A +LF E ER +P+ TY +LI G+C++ +L +A L D+M ++G+
Sbjct: 5 LNLLVRAGQHGQAVQLFRE-ER-CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P V +N +I+G CK G + + + + C P+ +F++L++ L +SG E ++
Sbjct: 63 PGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 487 V-SMATAS 493
SM T+S
Sbjct: 123 FESMHTSS 130
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 80 TYHSIIHKLARARAFDA---VESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
TY +II L + DA +E+ L+ + C N + VI A + + A+
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL 372
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
R+ V + S + ++ +L ++ D + +F + + PN LI
Sbjct: 373 ALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER-ECKPNPVAYAALIDG 431
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L K +V+ A+RV + M P + T+ ++L G G IE A R+ ++ + PD
Sbjct: 432 LSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+Y L+ G ++ + +A ++ +E G Y V++ CK K+ +A + +
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550
Query: 315 DMLQRKY 321
+++ Y
Sbjct: 551 KLIEAGY 557
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 184/359 (51%), Gaps = 2/359 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y G E A + + ++ + +L++ + + R + +F +
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF-DKM 269
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ +VPN T N LI C K D+E A DEM G++P++ T+ ++ G +
Sbjct: 270 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 329
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A + ++ +G +PDA TY +L++GY + G A + +EM G+EP VTY +
Sbjct: 330 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSL 389
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I + + EA +L + +L + P + +ID C G VE A L K + RK+
Sbjct: 390 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSV 449
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD +T++ C+EGK+ EA+ L DE + RG P ++YNTLI+G ++ +A
Sbjct: 450 PPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFX 509
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ D+M+ G P + TYN LI+ CK +L+EM++KG P+ +++ LIEG+
Sbjct: 510 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 202/389 (51%), Gaps = 9/389 (2%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E + +V S NT+++ + + R K + P+ +T LI +CK+
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK-GIEPDSYTYGSLISGMCKEG 257
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A + D+M +G+VPN VT+ T++ GY +GD+E A +++ +G +P +TY
Sbjct: 258 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 317
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ GR+ +A ++ EM G+ P+ +TY ++I + + + A +L ++ML +
Sbjct: 318 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK 377
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +I +L ++++A +L++++L + PD + + +I C G + A
Sbjct: 378 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERA 437
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L E +R S+P +T+NTL+ G C ++ EA L D+M +G++P+ +YN LI G
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISG 497
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ + G+ K+ + +EML G P +++ LI+ L ++ EG++ + + + +
Sbjct: 498 YGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKN-QEGDLAEELLKEMVNKGISP 556
Query: 499 DSWNFLLTRIVSDLDSGAGALDELLVKNC 527
D +L L G G +D L+ N
Sbjct: 557 DDSTYL------SLIEGMGNVDTLVEDNA 579
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 156/285 (54%), Gaps = 5/285 (1%)
Query: 199 DDVEGAIRVLDE----MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
D +EG ++ E M +G PN+V++ TI+ GY RG+IE A+R+ + +G PD
Sbjct: 183 DLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 242
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+ TY L+ G K GRL +A + D+M + G+ PN VTY +I+ +C A + D
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M+++ +PS + ++ L EG++ +A ++ K + +K +PD + +I+ + G
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
A L +E +G P+ +TY +LI + + EA L++ ++++GV P+V +N
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+I G C GN + +L+EM K P++ +F+ L++G G
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 467
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
V DLL EGK++ A E + P+ +TIIH G I A+++ D +G
Sbjct: 181 VFDLL--EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 238
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P TY +LI+GMC+ L EA L+D MVE G+ PN TYN LI G+C G+ +
Sbjct: 239 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 298
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+EM+ KG P+ ++++LL+ L+ G GE ++ G + ++ ++N L+
Sbjct: 299 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 355
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 207/404 (51%), Gaps = 16/404 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ ++ + R D V SL ++++ +I C F +I+ + + A+ TF +I
Sbjct: 80 FNKLMGVVVRMERPDLVISLYQKMERK-QIPCDVYSFNILIKCFCSCSKLPFALSTFGKI 138
Query: 141 EKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
K Q V + +TLL+ L R DL H M + PNV T L+ LC
Sbjct: 139 TKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR---------PNVVTFTTLMNGLC 189
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDA 255
++ V A+ +LD M G+ PN +T+ TI+ G GD +A + + + + P+
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y+ ++DG K GR +DA + EM++ G+ P+ TY MI+ FC + EA+ LL +
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML+RK P+ +I+ +E K +A EL+ +L + +P+ +++I CK+ +
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A+ +F +G P + T+NTLI G C + + + L +M E G+ + TYN
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI GFC +G+ + + ++M+ G P+ + + L++GL ++G
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 206/415 (49%), Gaps = 13/415 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I+ + + + +LL ++++ IK ++ +I GR A
Sbjct: 212 NQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNL 271
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ +++ + + + N +++ + R+ + + + K+ PNV T + LI A
Sbjct: 272 YTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLER-KINPNVVTYSALINAYV 330
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A + DEM G++PN +T+ +++ G+ + ++ A+ +F + +G PD
Sbjct: 331 KERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF 390
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+ L+DGY R+ D +++ EM + G+ + TY +I FC A +L M
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISST 365
+ P C ++D LC+ GK++DA E++K + + PD +
Sbjct: 451 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I L EGK EA++L+ E RG +P+ +TY+++I G+C+ + L EA +++D M K
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKS 570
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
P+V T+N L+ G+CK G +G+ + EM +G + ++ LI G + GN
Sbjct: 571 FSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGN 625
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 199/373 (53%), Gaps = 10/373 (2%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV N L+ +V+ +R DLV +++ K ++ +V++ NILIK C + A+
Sbjct: 76 SVIDFNKLMGVVVRMERPDLVISLYQKMERK-QIPCDVYSFNILIKCFCSCSKLPFALST 134
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ +G P++VT +T+L G + A D+ + P+ T+T LM+G +
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL----DLFHQMCRPNVVTFTTLMNGLCR 190
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSA 326
GR+ +AV ++D M ++G++PN++TYG +++ CK + A NLL M + ++ P+
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +ID L ++G+ DA L+ + K PD + +I C G+ EA++L E
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
ER P+++TY+ LI + + EA L+D+M+ +G+ PN TYN +I GFCK
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFL 504
+ M KGC P+ +F+ LI+G + + +++ T +G V ++ ++N L
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430
Query: 505 LTR--IVSDLDSG 515
+ +V DL++
Sbjct: 431 IHGFCLVGDLNAA 443
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 176/391 (45%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I + + + LL E+ K NP + L ++ EL +
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R + + + N++++ + R D MF K P+VFT N LI C
Sbjct: 346 LPR----GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK-GCSPDVFTFNTLIDGYC 400
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ +L EM G+V + T+ T++ G+ GD+ A + ++ G PD
Sbjct: 401 GAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 460
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ TY ++I K
Sbjct: 461 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGK 520
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L +M R VP++ +I+ LC++ ++++A +++ + K+ PD +T
Sbjct: 521 FLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 580
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ CK G++ + +LF E RG + +TY TLI G + + A ++ +M+ G
Sbjct: 581 LVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG 640
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ K + +LE++
Sbjct: 641 VYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 161/368 (43%), Gaps = 26/368 (7%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
K +PN TY ++I+ + R F E L E+ I + ++I +
Sbjct: 314 KINPNVV----TYSALINAYVKERKFFEAEELYDEMLPRGIIP-NTITYNSMIDGFCKQN 368
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPN 184
R + A F + V + NTL++ KR D L+H M + +V +
Sbjct: 369 RLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG-----LVAD 423
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
T N LI C D+ A+ + +M S G+ P++VT T+L G G +++A +F
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483
Query: 245 DI------LD-----RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
+ LD G PD TY +L+ G I G+ +A ++ EM G+ PN +TY
Sbjct: 484 AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
MI CK + EA + D M + + P ++ C+ G+V+D EL+ + R
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGR 603
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ + D T+IH K G I A +F E G P +T +++ + EL
Sbjct: 604 RGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKR 663
Query: 413 AGRLWDDM 420
A + +D+
Sbjct: 664 AVAMLEDL 671
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +F D++ +P + LM +++ R + + +ME + + ++ +
Sbjct: 58 LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ FC K A + + + + P ++ LC E +V +A +L+ ++
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C P+ +T+++ LC+EG++ EA L D E G P+ +TY T++ GMC+ + A
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233
Query: 415 RLWDDMVEKG-VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L M E ++PNV Y+ +I G K G + + EM +KG FP+ +++ +I+G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293
Query: 474 LYESGNEGEVGKVV 487
SG E +++
Sbjct: 294 FCSSGRWSEAQRLL 307
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 6/224 (2%)
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L G+ ++ L DA+ + +M + P+ + + ++ + ++ +L M +RK
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKM-ERK 106
Query: 321 YVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P + I C K+ A + ++ + PD ST++H LC E ++ EA
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166
Query: 380 KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
LF + R P+++T+ TL+ G+C + EA L D MVE G++PN TY ++ G
Sbjct: 167 LDLFHQMCR---PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223
Query: 440 CKIGNAKEGIRILEEMLDKGCF-PNKTSFSLLIEGLYESGNEGE 482
CKIG+ + +L +M + PN +S +I+GL++ G +
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSD 267
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 13/297 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ +Q LD A +F+ S + T++++I A+ D
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMAT--KGCSPDVFTFNTLIDGYCGAKRIDDGT 409
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
LL E+ + + + T+I + L G A+ ++ V + + NTLL+
Sbjct: 410 ELLHEMTETGLVA-DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 468
Query: 159 LVQNKRYDLVHLMFKN----------SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
L N + MFK SR V P+V T NILI L + A +
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELY 528
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
EMP G+VPN +T+++++ G + ++ A ++F + + + PD T+ L+ GY K
Sbjct: 529 KEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
GR+ D +++ EM G+ + +TY +I F K A ++ +M+ P +
Sbjct: 589 GRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDT 645
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 245/502 (48%), Gaps = 27/502 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ L P RL+ ++ +++ AL +F A + P FS + +H I+ ++A A
Sbjct: 5 PKSLSPHRLLKLLKAEKSPLSALNVFDAAVR-RPGFSPSSAVFHHILRRVA------ADP 57
Query: 99 SLLTELKQNPEI------KCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRS 151
LL L P I C E++ +T+++ Y P A+ F + F ++RS
Sbjct: 58 GLL--LAHAPRIIAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRS 115
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
NTLLNA V++ ++ FK +V PNV T N+L+K +CKK + E +L M
Sbjct: 116 FNTLLNAFVESHQWARAENFFKYFEAA-RVSPNVETYNVLMKVMCKKGEFEKGRGLLTWM 174
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
GM P+ +T+ T++GG GD+ A VF ++ +RG PD Y +++DG+ K G
Sbjct: 175 WGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDF 234
Query: 272 TDAVKVMDE-MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A ++ + + + V P+ V+Y VMI CK + E + + M + +
Sbjct: 235 VKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSA 294
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+I L E G + A ++++ ++ + PD + +++ LCK G + E +L++E + S
Sbjct: 295 LIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCS 354
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ ++ +YN + G+ E+ ++ +A LWD + +E + TY +++ G C G ++
Sbjct: 355 LRNVRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQ 410
Query: 451 ILEEMLDK--GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTR 507
+LEE + G ++ ++S LI L + G E VV + G S N L+
Sbjct: 411 VLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDG 470
Query: 508 IV--SDLDSGAGALDELLVKNC 527
V S LDS E+ K C
Sbjct: 471 FVKHSKLDSAVKVFREMSGKGC 492
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 191/400 (47%), Gaps = 15/400 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++IH L+ A + E+ P++ + + + AG E +
Sbjct: 291 TYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCK----AGNVEECFEL 346
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + K ++ R+VRS N L L +N + D +++ + + T +++ LC
Sbjct: 347 WEEMGKCSL-RNVRSYNIFLKGLFENGKVDDAMMLWDG-----LLEADSATYGVVVHGLC 400
Query: 197 KKDDVEGAIRVLDEMPSM--GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
V A++VL+E GM + +++++ G ++ A V + RG +
Sbjct: 401 WNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFN 460
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+ VL+DG++K +L AVKV EM G V+Y ++I + ++ EA + ++
Sbjct: 461 SHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVN 520
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ML++ + P +I L E ++ A LW + L PD + + +IH LC G
Sbjct: 521 EMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSG 580
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
K+ +A +L+ + +L+T+NT++ G + A ++W ++E ++P++ +YN+
Sbjct: 581 KVEDALQLYSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNI 640
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++G C G + + L++ L +G P ++++L+ +
Sbjct: 641 TLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 175/367 (47%), Gaps = 43/367 (11%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P+V TCN ++ LCK +VE + +EM + N+ ++ L G G +++A
Sbjct: 320 VRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL-RNVRSYNIFLKGLFENGKVDDAM 378
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME--DNGVEPNEVTYGVMIE 298
++ +L+ D+ TY V++ G G + A++V++E E + G++ +E Y +I
Sbjct: 379 MLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLIN 434
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A CK + EA +++ M +R +S +C +ID + K++ A ++++ + K C
Sbjct: 435 ALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSL 494
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +I+ L + + EA +E E+G P ++TY+TLI G+ ES + A RLW
Sbjct: 495 TVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLW 554
Query: 418 DDMVEKGVEPNVFTYNMLI----------------------------------QGFCKIG 443
++ G +P++ YN++I +GF K+G
Sbjct: 555 HQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIMEGFYKVG 614
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWN 502
N + +I +L+ P+ S+++ ++GL G + + A G + + +WN
Sbjct: 615 NCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWN 674
Query: 503 FLLTRIV 509
L+ ++
Sbjct: 675 ILVRAVI 681
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 201/442 (45%), Gaps = 44/442 (9%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N +TY+ ++ + + F+ LLT + + + T+I +G A+
Sbjct: 145 SPNVETYNVLMKVMCKKGEFEKGRGLLTWM-WGAGMSPDRITYGTLIGGVAKSGDLGFAL 203
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F + + V+ V N +++ + + M++ + V P+V + N++I
Sbjct: 204 EVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISG 263
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK + + + M +L T++ ++ G GD+ A++V+ +++ RG PD
Sbjct: 264 LCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPD 323
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEME------------------DNG----------- 285
T +++G K G + + ++ +EM +NG
Sbjct: 324 VVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDG 383
Query: 286 -VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK-------YVPSSALCCKVIDLLCE 337
+E + TYGV++ C A +L++ R+ + SS +I+ LC+
Sbjct: 384 LLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSS-----LINALCK 438
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLT 396
EG++++A + + + ++ C ++ + + +I K K+ A K+F E +G ++++
Sbjct: 439 EGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVS 498
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN LI G+ + EA ++M+EKG +P++ TY+ LI G + +R+ + L
Sbjct: 499 YNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFL 558
Query: 457 DKGCFPNKTSFSLLIEGLYESG 478
D G P+ ++++I L SG
Sbjct: 559 DTGHKPDIIMYNIVIHRLCSSG 580
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 222/480 (46%), Gaps = 86/480 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ L + F+A E ++ E+ + P NL + +R G G A
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNL-VDGLRKKGNIGS---AFDL 342
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+++KF V S+ N L+N++ ++ + D +F N HK + PN T +ILI + C
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK-GLFPNDVTYSILIDSFC 401
Query: 197 KKDDVEGAIRVL-----------------------------------DEMPSMGMVPNLV 221
K+ ++ A+ L DEM + G+ PN+V
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVV 461
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+T+++ GY G++ NA R++ ++ +G P+ T+T L+ G R+ +A K+ EM
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ V PNEVTY V+IE CK + A LLD+M+++ VP + +I LC G+V
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581
Query: 342 EDACE-------------------------------------------LWKRLLRKNCMP 358
+A E L + +L N +P
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 641
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ + + +L EG I +A +L D G + + +TYN LI G C+ + EA +
Sbjct: 642 NQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ G+ P+ +Y+ +I +C+ G+ KE I++ E ML++G P+ +++ LI G +G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 218/478 (45%), Gaps = 47/478 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P LV + ++ N+ A + + KF + + Y+++I+ + + D E
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF--GVAPSLFVYNALINSMCKDGKLDEAE 375
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
SL + + + +I ++ G+ ++A+ ++ + ++ +V ++L++
Sbjct: 376 SLFNNMGHKGLFP-NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+ + +F + PNV LI CK+ ++ A R+ EM G+ P
Sbjct: 435 HCKLGKLRAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISP 493
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N T T ++ G + A ++FG++++ +P+ TY VL++G+ K G A +++
Sbjct: 494 NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELL 553
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML--QRKY------VPSSALCCK 330
DEM + G+ P+ TY +I C + EAR ++D+ Q+K +P+
Sbjct: 554 DEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTA 613
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+I+ LC+ G ++ A L + +L N +P+ + + +L EG I +A +L D G
Sbjct: 614 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGF 673
Query: 391 IPSLLTYNTLIAGMC------ESAE-----------------------------LTEAGR 415
+ + +TYN LI G C E+AE L EA +
Sbjct: 674 LANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK 733
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
LW+ M+ +GV P+ YN LI G C G + + ++M+ +G PN+ +++ LI G
Sbjct: 734 LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 194/413 (46%), Gaps = 16/413 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKF-HPNFSHNYDTYHSIIHKLARARAFDA 96
+P + L+ ++ LD+AL H+ GK Y S+I + A
Sbjct: 387 FPNDVTYSILIDSFCKRGKLDVAL---HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+SL E+ N +K ++ ++I Y G A + + + + + + L+
Sbjct: 444 AKSLFDEMIANG-LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L R + +F ++ V+PN T N+LI+ CK+ + A +LDEM G+
Sbjct: 503 SGLCHANRMAEANKLF-GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDR--------GWVPDATTYTVLMDGYIKL 268
VP+ T+ ++ G G + A+ D+ G +P+ TYT L++G K+
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G + A + EM + PN+ TY ++ + + + E L D+L ++ ++
Sbjct: 622 GLMDKAELLCREMLASNSLPNQNTYACFLD-YLTSEGNIEKAIQLHDVLLEGFLANTVTY 680
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FE 387
+I C+ G++++A E+ ++ PD STII+ C+ G + EA KL++
Sbjct: 681 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN 740
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
RG P + YN LI G C + ELT+A L DDM+ +GV+PN TYN LI G C
Sbjct: 741 RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 220/489 (44%), Gaps = 68/489 (13%)
Query: 40 QRLYPKRLVSMIFRQQNLD---LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF-- 94
Q L P + ++ Q LD LAL+ F++ G H NF H+ ++ +IH L ++ +
Sbjct: 55 QTLKPHHVEKVLI--QTLDDSRLALRFFNFLG-LHKNFDHSTTSFCILIHALVQSNLYWP 111
Query: 95 -DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
++ L NPE LF + + +Y K N ++ +
Sbjct: 112 ASSLLQTLLLRGLNPE-----GLFESFLDSY----------------RKCNFSTTL-GFD 149
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L+ VQN+R +L L+ ++P + T + ++ L + A+ + DE+ S
Sbjct: 150 LLIQTYVQNRR-ELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVS 208
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G+ P++ +T ++ D A+ V G + G TY V + G K R+ +
Sbjct: 209 SGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWE 268
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
AV++ + + G+ + TY ++ CK ++ ++++M++ +VPS A ++D
Sbjct: 269 AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVD 328
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
L ++G + A +L ++ + P + + +I+ +CK+GK+ EA+ LF+ +G P
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388
Query: 393 SLLT-----------------------------------YNTLIAGMCESAELTEAGRLW 417
+ +T Y++LI+G C+ +L A L+
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D+M+ G++PNV Y LI G+CK G R+ EM KG PN +F+ LI GL +
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508
Query: 478 GNEGEVGKV 486
E K+
Sbjct: 509 NRMAEANKL 517
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 1/167 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+PN T + L + ++E AI++ D + G + N VT+ ++ G+ G I+ A
Sbjct: 640 LPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAE 698
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
V +++D G PD +Y+ ++ Y + G L +A+K+ + M + GV P+ V Y +I C
Sbjct: 699 VLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCC 758
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ +A L DDM++R P+ A +I C V + +
Sbjct: 759 VTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 213/453 (47%), Gaps = 18/453 (3%)
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQ---------------NPEIKCGENLFITV 120
H Y H L +AR +D+ +S+L L Q P ++F +
Sbjct: 110 HLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLL 169
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK 180
IR Y G + AV+TF + + SV + N +L ++V++KR +LV +F+ K
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-G 228
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PNV T NILI LC + +++ A +L +M G VP +VT+ T+L Y +G + A
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ +G D TY V +D R A ++ +M + PNEVTY +I F
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K K G A + ++M + P+ +I C G E+A L + +
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 408
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDD 419
T+++ LCK K AK+L + + + Y LI G+C++ L EA +L +
Sbjct: 409 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 468
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + GV P+V TY+ LI GFC++GN K I+ M G NK +S LI + GN
Sbjct: 469 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 528
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
E KV ++ +G + + N L++ + D
Sbjct: 529 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 561
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 207/408 (50%), Gaps = 6/408 (1%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N TY+++I+ + + E+ + ++ + +I + G E A+
Sbjct: 335 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKF-DLSPNCVTYNALIGGHCHVGDFEEAL 393
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ +E ++ + + TLLN L ++++++L + + R VV ++ +LI
Sbjct: 394 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI-AYTVLIDG 452
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK ++ A++++ M G+ P+++T+++++ G+ G+I++AK + + G V +
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y+ L+ + + G +T+A+KV M NG + T V++ + C+ K GEA L
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + VP+S +I+ G +A + +++ P +++ LCK G
Sbjct: 573 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 632
Query: 375 KIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+ EAKK + G++ S++ YNTL+A C+S L EA L+D MV+ V P+ +TY
Sbjct: 633 NLVEAKKFLNRLHYIPGAVDSVM-YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTY 691
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGC-FPNKTSFSLLIEGLYESGN 479
+ L+ G C+ G A + + + +G FPN ++ L++GL ++G+
Sbjct: 692 SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 739
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FTCN+L+ +LC+ + A + L M +G+VPN +T+ I+ GY GD NA F D
Sbjct: 549 FTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDD 608
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ G P TY L+ G K G L +A K ++ + + V Y ++ CK
Sbjct: 609 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGN 668
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK-VEDACELWKRLLRKNCMPDNAISS 364
EA L D M+Q +P S ++ LC +GK V C + R P++ + +
Sbjct: 669 LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYT 728
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ L K G A F+E ++G+ P + +N +I ++ +A + M
Sbjct: 729 CLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWW 788
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GV PN+ TYN+L+ GF K + + M+ +G FP+K +F LI GL +SG
Sbjct: 789 GVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 843
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 185/407 (45%), Gaps = 6/407 (1%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY S++ L R +A AV T + + ++ ++ AG P+ A F
Sbjct: 690 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFE 748
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ K + N ++++ + + + F R + V PN+ T NIL+ KK
Sbjct: 749 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRW-WGVCPNLATYNILLHGFSKK 807
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ + + M G+ P+ +T +++ G G + ++ G ++ G + D T+
Sbjct: 808 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 867
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L++ Y + G++ A +++ M GV P+ TY + K E+ +L +ML+
Sbjct: 868 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 927
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+P A +I+ +C G ++ A +L + S ++ L GK +
Sbjct: 928 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 987
Query: 379 AKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + D R +P++ T+ TL+ C A++ EA +L M G++ +V YN+LI
Sbjct: 988 AMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIM 1047
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN--EGE 482
G C G++ + EEM + PN T++++L++ + + N +GE
Sbjct: 1048 GMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1094
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 179/449 (39%), Gaps = 7/449 (1%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
HP+F TY S++ L + + L L P ++ T++ +G
Sbjct: 615 HPSFF----TYGSLLKGLCKGGNLVEAKKFLNRLHYIPG-AVDSVMYNTLLAETCKSGNL 669
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
AV F ++ + NV + ++LL L + + +F + + + PN
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 729
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ L K + A +EM G P+ V I+ RG + A F + G
Sbjct: 730 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TY +L+ G+ K L + + M G+ P+++T+ +I K
Sbjct: 790 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 849
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL M+ + +I+ E GK+ A +L + PD + I + L
Sbjct: 850 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K+ E+ + E E G IP Y TLI GMC ++ A +L D+M G +
Sbjct: 910 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 969
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+ +++G G ++ + +L+ ML P +F+ L+ E K+ +
Sbjct: 970 VAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGV 1029
Query: 490 ATASG-SVESDSWNFLLTRIVSDLDSGAG 517
G ++ ++N L+ + ++ DS A
Sbjct: 1030 MELCGLKLDVVAYNVLIMGMCANGDSAAA 1058
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 34/274 (12%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FT NILI + + A +++ M ++G+ P+ T+ I G + + V +
Sbjct: 865 FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 924
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L+ G +P Y L++G ++G + A K+ DEME G +EV M+ K
Sbjct: 925 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ +A +LD ML+ + +P+ A ++ C + K+ +A +L K M
Sbjct: 985 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL------KGVME------- 1031
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
LC G ++ YN LI GMC + + A L+++M + +
Sbjct: 1032 ----LC-----------------GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDL 1070
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
PN+ TY +L+ N +G ++L ++ ++G
Sbjct: 1071 CPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 178/347 (51%), Gaps = 2/347 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N LL L ++ R D V+ + N VPN +T L+++LC+ E A V
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTY-NDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G PN+ +++ ++ G ++ A + +++D G P+ TY L+ G K+G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L +AV + M G P+ V Y V+I+ F K GEA L ++ML++ +P+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
++ +G+ L+K +LR+ C+P+ + ++ CK G + EA +LF E G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +++YNTLI GMC + EA RL +M+ GV P++ +YN+LI G+ K G I
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ E+ G P+ S+S +I+ L +G G V A+GS
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 172/321 (53%), Gaps = 2/321 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL +L Q +R++ +F+ + PNVF+ +ILI LC+ V+ A +L+EM
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDG 116
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G PN+VT+ ++L G G ++ A +F ++ RG PD Y VL+DG+ K G + +A
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ +EM + G P TY ++ F + + G ++L DML++ VP+ ++D
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
C+ G + +A L+ + C PD +T+I +C +GK EA++L E R + P
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+++YN LI G +S L A +L+ ++ + G+EP+ F+Y+ +I C+ G + +
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 454 EMLDKGCFPNKTSFSLLIEGL 474
+M+ G P+ L+ GL
Sbjct: 357 DMIANGSAPDAAVVIPLVIGL 377
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 192/407 (47%), Gaps = 7/407 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAV 134
N TY ++ L +A+ F+ S+ + C N+F I GL + + A
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ---GCSPNVFSYSILIAGLCRGQKVDEAA 107
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + Q +V + +LL+ L + + +F ++ P+ N+LI
Sbjct: 108 ELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYR-GCPPDGVVYNVLIDG 166
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
KK D+ A R+ +EM G +P + T+ ++L G+ +G+ + +F D+L +G VP+
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+ L+DG+ K+G + +A ++ EM G P+ V+Y +I C K EA+ LL
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M++ P +ID + G ++ A +L+ + + PD STII LC+ G
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Query: 375 KIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ A +F D GS P L+ G+C LTE+ L+ MV+ P + YN
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+L+ CK + + I E+ ++G P+ +++E L S ++
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDK 453
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 13/353 (3%)
Query: 47 LVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ + R Q +D A ++ + G PN TY S++ L + L + +
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVV----TYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 105 --KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ P N+ I G G A + F + + +V + N+LL+ +
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGE---AYRLFEEMLEKGCIPTVFTYNSLLSGFSRK 205
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ V +FK+ + VPN+FT N L+ CK D+ A R+ EM S+G P++V+
Sbjct: 206 GEFGRVQSLFKDMLRQ-GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ T++ G +G A+R+ +++ G PD +Y +L+DGY K G L A+K+ E+
Sbjct: 265 YNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+G+EP+ +Y +I+ C+ K G A + DM+ P +A+ ++ LC ++
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
++CEL++ +++ C+P + +++ LCK + + ++F E ERG P +
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 4/200 (2%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
++Y ++E K + +DML VP++ ++ LC+ + E+A +++
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ + C P+ S +I LC+ K+ EA +L +E + G P+++TY +L++G+C+ +
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L EA L+ MV +G P+ YN+LI GF K G+ E R+ EEML+KGC P +++
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 470 LIEGLYESGNEGEVGKVVSM 489
L+ G +GE G+V S+
Sbjct: 198 LLSGF---SRKGEFGRVQSL 214
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
++++L + G+ + + +L C+P+ ++ LC+ + EA+ +F +G
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ +Y+ LIAG+C ++ EA L ++M++ G +PNV TY L+ G CK+G KE +
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLT 506
+ M+ +GC P+ +++LI+G + G+ GE ++ G + + ++N LL+
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 153/601 (25%), Positives = 257/601 (42%), Gaps = 121/601 (20%)
Query: 14 CLLQSIGGARCSLSTITVTP-PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHP 72
C + +IG R S+ + P P P + + +I Q++ ALQ F +A P
Sbjct: 68 CNVSNIG--RSSVVNLQSKPISTTPVPTH---QHIAHLILEQKSASQALQTFRWASNL-P 121
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
NF HN TY ++IHKL R F+ V+ +L E+ + E++F+T++R G A
Sbjct: 122 NFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQ 181
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+K I KF S++ N++L+ LV+ + DL ++ V + +T IL+
Sbjct: 182 MIKVLDLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNGVSGDDYTFGILM 240
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD---- 248
K LC + + A ++L M S G PN V + T++ G + A+ + ++++
Sbjct: 241 KGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSDV 300
Query: 249 ---------------------------RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
G+VPD T T ++ K GR+T+ V+V++ +
Sbjct: 301 TFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERV 360
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS-------------SALC 328
E G + V Y +I+ FC K+ +L DM + +P+ S +
Sbjct: 361 ESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGML 420
Query: 329 CKVIDL----------------------LCEEGKVEDACELWK----------------- 349
IDL LC G++ED ++ +
Sbjct: 421 DSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYN 480
Query: 350 ----RLLRKN--------------CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
L +KN P S I C EG I +AK+++D+ + G
Sbjct: 481 SIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGG 540
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+PS+L Y LI G C+ + EA L ++MV+ G P T+N LI FC G ++
Sbjct: 541 VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALK 600
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD------SWNFL 504
++E+M+ +GC P+ S+S +++ L N+G+ K V + VE D +WN +
Sbjct: 601 LMEDMVGRGCLPDMGSYSPMVDALC---NKGDFQKAVRLFLQ--MVEKDILPDYSTWNSM 655
Query: 505 L 505
L
Sbjct: 656 L 656
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 2/195 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N +I L KK+ E A+ L +M + P V + + G+ G I +AKRV+ ++
Sbjct: 480 NSIIYGLYKKNQFEEALEFLTKMEKL--FPRAVDRSLRILGFCNEGSIGDAKRVYDQMIK 537
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G VP Y L+ G+ + G + +A ++++EM D+G P T+ +I AFC K G
Sbjct: 538 EGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGS 597
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L++DM+ R +P ++D LC +G + A L+ +++ K+ +PD + ++++
Sbjct: 598 ALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLL 657
Query: 369 WLCKEGKIWEAKKLF 383
L +E E LF
Sbjct: 658 CLTQETVWLEGDNLF 672
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP+V LI C+ +V A +++EM G P T ++ + +G + +A +
Sbjct: 541 VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALK 600
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D++ RG +PD +Y+ ++D G AV++ +M + + P+ T+ M+
Sbjct: 601 LMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLT 660
Query: 302 KGKKSGEARNLLDDMLQ 318
+ E NL LQ
Sbjct: 661 QETVWLEGDNLFHLQLQ 677
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 207/402 (51%), Gaps = 3/402 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ ++I+ L + F L ++ + + + T+I G LA F +
Sbjct: 47 TFTTLINGLGKVGKFAQAVELFDDMVARG-CQPDDYTYTTIINGLCKIGETALAAGLFKK 105
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ Q +V + +TL+++L + +R + +F + K + P +FT LI+ LC
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLIQGLCNFS 164
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A +L+EM S+ ++PN+VT ++ + G + A+ V + + G PD TY
Sbjct: 165 RWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYN 224
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
LM GY + +A K+ D M G +P+ +Y ++I +CK K+ EA+ L ++M+ +
Sbjct: 225 SLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQ 284
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P++ +I LC+ G++ +A +L+K + +P+ + ++ CK+G + +A
Sbjct: 285 GSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKA 344
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+LF + + P+L+ YN L+ MC+S L +A L+ ++ G++PNV Y +I G
Sbjct: 345 FRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIING 404
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
CK G E + M D GC P++ S++++I G + +E
Sbjct: 405 LCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDE 446
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 1/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T NILI C+ V+ VL + +G+ P +VT TT++ G G A +
Sbjct: 8 PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F D++ RG PD TYT +++G K+G A + +ME+ G + N VTY +I + CK
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA ++ M + P+ +I LC + ++A L + N MP+
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++ CKEGK+ A+ + E G P ++TYN+L+ G E+ EA +L+D M+
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
KG +P+VF+Y++LI G+CK E ++ EM+ +G PN S++ LI GL + G
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 199/383 (51%), Gaps = 7/383 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY +II+ L + L K+ E C N+ + T+I + R A+ F
Sbjct: 82 TYTTIINGLCKIGETALAAGLF---KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF 138
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ ++ ++ + +L+ L R+ + N ++PNV T N+L+ CK
Sbjct: 139 SYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALL-NEMTSLNIMPNVVTFNVLVDTFCK 197
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ V A VL M MG+ P++VT+ +++ GY ++ A+++F ++ +G PD +
Sbjct: 198 EGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFS 257
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y++L++GY K R+ +A ++ +EM G PN V+Y +I C+ + EA++L +M
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMH 317
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+P+ ++D C++G + A L++ + P+ + + +++ +CK G +
Sbjct: 318 TNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLK 377
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A++LF E F G P++ Y T+I G+C+ L EA + +M + G P+ F+YN++I
Sbjct: 378 DARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVII 437
Query: 437 QGFCKIGNAKEGIRILEEMLDKG 459
+GF + + + ++ EM D+G
Sbjct: 438 RGFLQHKDESRAVHLIGEMRDRG 460
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 136/293 (46%), Gaps = 37/293 (12%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P+ T +L++ + +L R+ V+ + G++P VT+ +I K K +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L DDM+ R P +I+ LC+ G+ A L+K++ C + ST+IH
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK ++ EA +F + I P++ TY +LI G+C + EA L ++M + PN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 429 VFTYNMLIQGFCKIGN--AKEGI---------------------------------RILE 453
V T+N+L+ FCK G A EG+ ++ +
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
M+ KGC P+ S+S+LI G ++ E ++ + GS ++ S+N L+
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 4/228 (1%)
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
ME G+ PN T ++I FC+ ++ ++L ++ P+ +I+ L + GK
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNT 399
A EL+ ++ + C PD+ +TII+ LCK G+ A LF + E G +++TY+T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI +C+ + EA ++ M K + P +FTY LIQG C KE +L EM
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLL 505
PN +F++L++ + G V+ T G VE D ++N L+
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMG-VEPDVVTYNSLM 227
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S NTL++ L Q R +FKN H +PN++T IL+ CK+ + A R+
Sbjct: 292 SYNTLIHGLCQLGRLREAQDLFKN-MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRA 350
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M S + PNLV + ++ G++++A+ +F ++ G P+ YT +++G K G
Sbjct: 351 MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
L +A++ MED+G P+E +Y V+I F + K A +L+ +M R ++ +
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAG 466
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L++ + + +D A Q+F+ H + N +Y+++IH L + + L +
Sbjct: 261 LINGYCKAKRIDEAKQLFNEM--IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHT 318
Query: 107 NPEIKCGENLFITVIRNYGLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
N + NL+ I G + L A + F ++ ++ ++ N L+NA+ ++
Sbjct: 319 NGNLP---NLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375
Query: 165 YDLVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
K++R F + PNV +I LCK+ ++ A+ M G P
Sbjct: 376 -------LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ ++ I+ G++ D A + G++ DRG++ DA T
Sbjct: 429 DEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 212/425 (49%), Gaps = 10/425 (2%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL-TELKQN--PEIK 111
++ DLA ++F F H+ T ++++ AR + +LL EL P+++
Sbjct: 36 KDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVE 95
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHL 170
N+ IT Y LA PE A +E+ + V S+++ N +L+ L ++ +
Sbjct: 96 -TWNVLIT---GYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F+ + + ++ T ++ L K ++ A+ +++++ + G P + T+ +L G
Sbjct: 152 HFETTTTNGCTI-DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G +E A + I+D G PD TYT L+DG K R +A K+ EM G+ +
Sbjct: 211 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDT 270
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
V Y +I + K +A ++ M + VP +ID LC+ G++ A ++K
Sbjct: 271 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS 330
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAE 409
+ + P+ + S +IH LCK K+ A ++ + ++ P +TYN LI G+C+S +
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A +D+M+E G +P+V+TYN+L+ GFCK GN + ++M C PN ++
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGT 450
Query: 470 LIEGL 474
LI GL
Sbjct: 451 LISGL 455
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 11/382 (2%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTC 188
AV +I ++ + N LLN L + R DL+ + N P+V T
Sbjct: 184 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-----CTPDVVTY 238
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI L K+ A ++ EM G+V + V +T ++ G + G I A V+ +
Sbjct: 239 TSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTS 298
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G VPD T + ++DG K GR+ AV++ ME G+ PNEV Y +I CK +K
Sbjct: 299 QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 358
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L M + P + +ID LC+ G VE A + +L C PD + ++
Sbjct: 359 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVS 418
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK G A +FD+ P+++TY TLI+G+C+ +LT+A + M E+G P
Sbjct: 419 GFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPP 478
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ F Y+ L+ G CK G + G + +EM G N + + LI L ++ E +
Sbjct: 479 DSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLF 537
Query: 488 SMATASGSVESDSWNFLLTRIV 509
+ G ++N +++ ++
Sbjct: 538 NAIRKEGMPHPYAYNSIISTLI 559
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 164/337 (48%), Gaps = 5/337 (1%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY S+I L + R+F+A + L E+ + + +IR AG+ A +
Sbjct: 237 TYTSLIDGLGKEKRSFEAYK-LFKEMALRGLV-LDTVCYTALIRGLLQAGKIPQASSVYK 294
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ V +L+T+++ L + R +FK+ + + PN + LI LCK
Sbjct: 295 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKA 353
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
++ A+ +L +M P+ +T+ ++ G GD+E A+ F ++L+ G PD TY
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L+ G+ K G A V D+M + PN VTYG +I CK ++ +A M +
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R P S + ++D LC+ GK+E C L+ + R + ++ + +I LCK ++ E
Sbjct: 474 RGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDE 532
Query: 379 AKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
A LF+ + +P YN++I+ + +SA++ R
Sbjct: 533 AVSLFNAIRKEGMPHPYAYNSIISTLIKSAKVNPCTR 569
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 170/365 (46%), Gaps = 9/365 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++++ L + + LL ++ N P++ + ++I G R A K
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV----TYTSLIDGLGKEKRSFEAYKL 257
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + L+ L+Q + ++K + VP+V T + +I LC
Sbjct: 258 FKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ-GCVPDVVTLSTMIDGLC 316
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+R+ M + G+ PN V ++ ++ G ++ A + + PD
Sbjct: 317 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 376
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+DG K G + A DEM + G +P+ TY +++ FCK + A + DDM
Sbjct: 377 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P+ +I LC+ ++ A ++ + + C PD+ + S+++ LCK GK+
Sbjct: 437 SSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKL 496
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
LFDE ER + + T LI +C++ + EA L++ + ++G+ P+ + YN +I
Sbjct: 497 EGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 555
Query: 437 QGFCK 441
K
Sbjct: 556 STLIK 560
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+ T L+D + + R +A ++ P+ T+ V+I +C ++ EA
Sbjct: 54 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113
Query: 310 RNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
++ +M + V PS V+ LC+ GKV A + ++ C D + I+
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
WL K KI +A L ++ G P++ TYN L+ G+C+ L EA L +V+ G P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+V TY LI G K + E ++ +EM +G + ++ LI GL ++G + V
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293
Query: 488 SMATASGSV 496
T+ G V
Sbjct: 294 KTMTSQGCV 302
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 243/492 (49%), Gaps = 27/492 (5%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
+L L+ F ++ K + S+ + ++H LA ++ + V S L +N E ++F
Sbjct: 59 ELVLRFFKWSQKEY-RLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKN-EKHTVSSVF 116
Query: 118 ITVIRNYGLAGRPEL-----------------AVKTFLRIEKFNVQRSVRSLNTLLNALV 160
+++ + G G L A + F R + + + S+ S N LL+ALV
Sbjct: 117 HSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALV 176
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ + V ++K K ++ N+ T NI I LC+ + A +++M + G+ PN+
Sbjct: 177 KENKIGDVEYVYK-EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNV 235
Query: 221 VTHTTILGGYVWRGD---IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
VT+ T++ GY RG + A+ ++L P+ T+ L+DG+ K + A K
Sbjct: 236 VTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKA 295
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+EM+ G++PN VTY +I C K EA +L D M+ P+ +I+ C+
Sbjct: 296 FEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCK 355
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLT 396
+ +++A +++ + ++ +P+ +T+I CKEG + E L + G +P++ T
Sbjct: 356 KKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 415
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN LIAG+C +L A L ++M KG++ +V TYN+LI G CK ++ ++L EM
Sbjct: 416 YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF 475
Query: 457 DKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLLTRI--VSDLD 513
+ G PN +++ L++G G + + M ++N L+ ++ L+
Sbjct: 476 NLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLE 535
Query: 514 SGAGALDELLVK 525
+ G L+E+L K
Sbjct: 536 AANGLLNEMLEK 547
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 172/385 (44%), Gaps = 57/385 (14%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLMF--- 172
F+ + N G+ EL ++ F +K + + + + +L+ L +KRY V
Sbjct: 47 FLDQLLNAGVDS--ELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSF 104
Query: 173 -KNSRHKFKVV------------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
KN +H V ++L+ A K ++ A G +
Sbjct: 105 VKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLS 164
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
L + +L V I + + V+ +++ R + T+ + ++G + G+L A ++
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE 224
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
+M+ G+ PN VTY +++ +CK G A G
Sbjct: 225 DMKAWGISPNVVTYNTLVDGYCK---RGSA-----------------------------G 252
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYN 398
K+ A K +L P+ +T+I CK+ + AKK F+E ++ G P+++TYN
Sbjct: 253 KMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN 312
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
+LI G+C + +L EA LWD MV G++PN+ TYN LI GFCK KE ++ +++ +
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372
Query: 459 GCFPNKTSFSLLI-----EGLYESG 478
PN +F+ +I EG+ E G
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEG 397
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 24/361 (6%)
Query: 74 FSHNYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
S N TY++++ K A E+ + E+ N +I E F T+I +
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLAN-KICPNEVTFNTLIDGFCKDENV 289
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN-KRYDLVHLMFKNSRHKFKVVPNVFTCN 189
A K F ++K ++ ++ + N+L+N L N K + + L K K PN+ T N
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLK--PNIVTYN 347
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI CKK ++ A +V D++ +VPN++T T++ Y G +E + +LD
Sbjct: 348 ALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE 407
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G +P+ +TY L+ G + L A ++++EME+ G++ + VTY ++I+ CK KS A
Sbjct: 408 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 467
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LL++M P+ ++D C EGK++ A + R+ ++ P+ + +I
Sbjct: 468 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527
Query: 370 LCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
CK K+ A L +E E+G P+ TY+ + RL +M+EKG P+
Sbjct: 528 YCKINKLEAANGLLNEMLEKGLNPNRTTYDIV--------------RL--EMLEKGFSPD 571
Query: 429 V 429
+
Sbjct: 572 I 572
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 240/472 (50%), Gaps = 17/472 (3%)
Query: 10 TAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH--YA 67
T P L ++ ++ +PP +P L + + + + D + ++H +
Sbjct: 16 TQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTL-----IDNLRKARQYDAVVSVYHKMVS 70
Query: 68 GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA 127
P F+ S ++ + AF +V SL+T+ + NL + V++ + +
Sbjct: 71 ALVLPRFTSLSALTESFVNTHHPSFAF-SVLSLMTKRGFGVNVY---NLNL-VLKGFCRS 125
Query: 128 GRPELAVKTFLRIEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
G+ + A+ F ++++ V + NTL+N + KR ++F+ + PN+
Sbjct: 126 GQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNL 185
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T ++LI CK +V + +L+EM G+ ++ +++++ + GDIE + +F +
Sbjct: 186 VTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDE 245
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L R P+ TY+ LM G + GR +A +++ +M GV P+ V Y V+ + CK +
Sbjct: 246 MLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGR 305
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+G+A +LD M+Q+ P + V++ LC+E +++DA + + +++K PD +T
Sbjct: 306 AGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNT 365
Query: 366 IIHWLCKEGKIWEAKKLFDEF--ERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
++ LC GKI EA L+ E+ + P + T N LI G+C+ + +A R+ MVE
Sbjct: 366 LLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVE 425
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G++ N+ TYN LI+G+ E +++ + ++ G PN ++S++I GL
Sbjct: 426 MGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGL 477
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 215/500 (43%), Gaps = 56/500 (11%)
Query: 56 NLDLALQIFHYAGK------FHPNFSHNYD-------TYHSIIHKLARARAFDAVESLLT 102
NL+L L+ F +G+ NYD TY+++++ +A+ L
Sbjct: 114 NLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFE 173
Query: 103 ELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+K+ + + + +I Y +G + +E+ ++ V ++L++A
Sbjct: 174 AMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGE 233
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ +F + KV PNV T + L++ L + A +L +M + G+ P++V
Sbjct: 234 GDIETGRELFDEMLRR-KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVA 292
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+T + G G +A +V ++ +G P TY V+++G K R+ DA V++ M
Sbjct: 293 YTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMV 352
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY--VPSSALCCKVIDLLCEEGK 340
G +P+ VTY +++ C K EA +L +L K+ P C +I LC+EG+
Sbjct: 353 KKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGR 412
Query: 341 VEDAC-----------------------------------ELWKRLLRKNCMPDNAISST 365
V DA +LWK + P++ S
Sbjct: 413 VHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSV 472
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ LCK + A+ LF + + I P+++ YN L+ +C L +A L+ +M
Sbjct: 473 MINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVN 532
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG----NE 480
+V ++N++I G K G+ K +L EM P+ +FS+LI + G
Sbjct: 533 HNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAM 592
Query: 481 GEVGKVVSMATASGSVESDS 500
G K+VS G V DS
Sbjct: 593 GLYEKMVSCGHVPGVVVFDS 612
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 168/346 (48%), Gaps = 10/346 (2%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ C+ LI L K + + V +M S ++P + + + +V A V
Sbjct: 40 PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN--GVEPNEVTYGVMIEAF 300
+ RG+ + +++ G+ + G+ A+ + +M+ N V P+ VTY ++ F
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159
Query: 301 CKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK K+ EAR L + M + P+ +ID C+ G+V + L + + R+ D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWD 418
+ S++I C EG I ++LFDE R + P+++TY+ L+ G+ + EA +
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
DM +GV P+V Y +L G CK G A + I++L+ M+ KG P ++++++ GL +
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339
Query: 479 NEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSGAGALDELL 523
+ VV M G ++ ++N LL + GAG + E +
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLC-----GAGKIHEAM 380
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 8/280 (2%)
Query: 151 SLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ NTLL L ++ DL L+ KF V P+VFTCN LI+ LCK+ V A R
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLS---EKFHVKPDVFTCNNLIQGLCKEGRVHDAAR 418
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+ M MG+ N+VT+ ++ GY+ + A +++ ++ G+ P++ TY+V+++G
Sbjct: 419 IHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLC 478
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K+ L+ A + +M+D+G+ P + Y ++ + C+ +AR+L +M +
Sbjct: 479 KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ID + G V+ A EL + + +PD S +I+ K G + EA L+++
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKM 598
Query: 387 ER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
G +P ++ +++L+ G E + L M +K V
Sbjct: 599 VSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDV 638
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 144/317 (45%), Gaps = 12/317 (3%)
Query: 80 TYHSIIHKLARA----RAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
TY++++ L A A D + LL+E P++ NL I+ GR A
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNL----IQGLCKEGRVHDAA 417
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNA-LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + +Q ++ + N L+ L K + + L F PN T +++I
Sbjct: 418 RIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFS--PNSMTYSVMIN 475
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK + A + +M G+ P ++ + ++ +E A+ +F ++ +
Sbjct: 476 GLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNV 535
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D ++ +++DG +K G + A +++ EM + P+ VT+ ++I F K EA L
Sbjct: 536 DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLY 595
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ M+ +VP + ++ +G+ E L ++ K+ + D+ ++STI+ LC
Sbjct: 596 EKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHM 655
Query: 374 GKIWEAKKLFDEFERGS 390
+ + +K+ +F + S
Sbjct: 656 SRNLDVEKILPKFSQQS 672
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +++ ++ +V N L+ +L + + +F+ R+ V +V + NI+I
Sbjct: 490 FCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNV-DVVSFNIIIDGTL 548
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K DV+ A +L EM M +VP+ VT + ++ + G ++ A ++ ++ G VP
Sbjct: 549 KAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVV 608
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+ L+ GY G + ++ +M D V + ++ C ++ + +L
Sbjct: 609 VFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKF 668
Query: 317 LQRKYVPSSALCCKVIDLL 335
Q+ S K +LL
Sbjct: 669 SQQSEHTSKGTTIKCHELL 687
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 190/335 (56%), Gaps = 6/335 (1%)
Query: 144 NVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
+V + S NTL+N L + K+ + V L+ + PN TC L+ LCK ++
Sbjct: 28 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLE--MEAAGCFPNSVTCTTLMDGLCKDGRMD 85
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+ +L+ M G ++V + T++ G+ G+++ K +F ++L +G + TY+ L+
Sbjct: 86 EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLV 145
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
G +LG+ +A V++ M ++G+ P+ VTY +I+ CK ++ A +LL+ M+++
Sbjct: 146 HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE 205
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
PS+ ++ LC+EG V DA ++ + ++ K D +T++ LC +GK+ EA KL
Sbjct: 206 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 265
Query: 383 FDEF---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
F+ E P++ T+N LI G+C+ LT+A ++ MV+KG N+ TYNML+ G
Sbjct: 266 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 325
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
K G KE + + +++LD G PN ++S+LI+G
Sbjct: 326 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 168/328 (51%), Gaps = 38/328 (11%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NI++K LC+ V A+ ++ EM + P++V++ T++ G ++ A + ++
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P++ T T LMDG K GR+ +A+++++ M+ G + + V YG +I FC
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 309 ARNLLDDMLQR----KYVPSSALC---CK----------------------------VID 333
+ L D+ML + V S L C+ +ID
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
LC++G+ A +L ++ K P N + ++ LCKEG + +A K+ E+G
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMV--EKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
++TYNTL+ G+C+ ++ EA +L++ M E +EPNVFT+NMLI G CK G + ++
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I +M+ KG N ++++L+ G ++G
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAG 329
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 201/458 (43%), Gaps = 52/458 (11%)
Query: 47 LVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
L+S NLD ++F GK S N TY ++H L R + ++L +
Sbjct: 109 LISGFCNNGNLDRGKELFDEMLGK---GISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 165
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR- 164
++ + V + L++ L ++ R
Sbjct: 166 EH------------------------------------GIHPDVVTYTGLIDGLCKDGRA 189
Query: 165 ---YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
DL++LM + P+ T N+L+ LCK+ V A ++L M G ++V
Sbjct: 190 THAMDLLNLMVEKGEE-----PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV 244
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRG--WVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
T+ T++ G +G ++ A ++F + D P+ T+ +L+ G K GRLT AVK+
Sbjct: 245 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 304
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
+M G N VTY +++ K K EA L +L +VP+S +ID C+
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMR 364
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYN 398
+ A L+ + P +T++ LCKEG + +AK LF E + P ++++N
Sbjct: 365 MLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFN 424
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
T+I G ++ + L MVE G+ P+ T++ LI K+G E LE M+
Sbjct: 425 TMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVAS 484
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G P+ + L++GL G+ E+ ++ A G+V
Sbjct: 485 GFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 201/455 (44%), Gaps = 44/455 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
+Y+++I+ L +A+ LL E++ C N GL GR + A++
Sbjct: 35 SYNTLINGLCKAKKLKEAVGLLLEMEA---AGCFPNSVTCTTLMDGLCKDGRMDEAMELL 91
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++K V TL++ N D +F K + NV T + L+ LC+
Sbjct: 92 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK-GISANVVTYSCLVHGLCR 150
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A VL+ M G+ P++VT+T ++ G G +A + ++++G P T
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y VL+ G K G + DA K++ M + G + + VTY +++ C K EA L + M
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270
Query: 318 QRKYV--PSSALCCKVIDLLCEEG-----------------------------------K 340
+ P+ +I LC+EG K
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
+++A ELWK++L +P++ S +I CK + AK LF E G P+L YNT
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 390
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+A +C+ L +A L+ +M EP++ ++N +I G K G+ + + +M++ G
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
P+ +FS LI L + G E + ASG
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 117/219 (53%), Gaps = 2/219 (0%)
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++++ C+ EA L+ +M ++ P +I+ LC+ K+++A L +
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEA 413
C P++ +T++ LCK+G++ EA +L + ++ G ++ Y TLI+G C + L
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+D+M+ KG+ NV TY+ L+ G C++G KE +L M + G P+ +++ LI+G
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 474 LYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIVSD 511
L + G ++++ G S+ ++N LL+ + +
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 221
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 6/314 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE-NLFITVIRNYGLA--GRPELAVKT 136
TY++++ L D L + N C E N+F + GL GR AVK
Sbjct: 245 TYNTLMKGLCDKGKVDEALKLFNSMFDNEN--CLEPNVFTFNMLIGGLCKEGRLTKAVKI 302
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ K ++ + N LL ++ + ++K VPN FT +ILI C
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD-LGFVPNSFTYSILIDGFC 361
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A + EM + G+ P L + T++ G +E AK +F ++ + PD
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 421
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
++ ++DG +K G ++ +M + G+ P+ +T+ +I K + EA++ L+ M
Sbjct: 422 SFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERM 481
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + P + + ++ L +G + L ++ K + D I STI+ LC +
Sbjct: 482 VASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQE 541
Query: 377 WEAKKLFDEFERGS 390
+ +L F +G+
Sbjct: 542 VDVMELLPTFFQGT 555
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 81/197 (41%), Gaps = 1/197 (0%)
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+A F + + ++ NTL+ +L + + +F+ + P++ + N +
Sbjct: 368 IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA-NCEPDIISFNTM 426
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I K D + + +M MG+ P+ +T +T++ G+++ AK ++ G+
Sbjct: 427 IDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGF 486
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PDA Y L+ G G T+ + ++ +M G + ++ C + +
Sbjct: 487 TPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVME 546
Query: 312 LLDDMLQRKYVPSSALC 328
LL Q +S C
Sbjct: 547 LLPTFFQGTSEGASISC 563
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 203/378 (53%), Gaps = 14/378 (3%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNIL 191
AV F R+ + N N +L +LV++K Y V ++ + + +F+ + PN+ CNIL
Sbjct: 46 AVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTV--LYLSQKMEFRGIKPNLVNCNIL 103
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD--- 248
I + C+ + A VL ++ MG PN +T T++ G G I + + G + D
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163
Query: 249 -------RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
PD T+T+L+DG+ K GR+ +A V+ M G++P VTY +++ +
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K+ +A+++ + M Q P +I+ C+ +++A EL K + K +P+
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S++I LCK GKI A KL DE +RG P+++TY++++ +C++ ++ A L M
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+G++PN++TY +LI+G C+ G ++ ++ E++L KG N +++++I+G + G
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403
Query: 481 GEVGKVVSMATASGSVES 498
E ++S +G + +
Sbjct: 404 DEALTLLSKMEDNGCIPN 421
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 172/348 (49%), Gaps = 10/348 (2%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM---FKNSR 176
+I ++ G A +I K + + +LNTL+ L N + H + K++
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 177 HKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F + P+V+T IL+ CK+ V+ A VL M G+ P +VT+ +++ GY
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+ AK +F + G PD +Y++L++G+ K+ + +A++++ EM + PN
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I+ CK K A L+D+M R P+ ++D LC+ +V++A L +
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAE 409
+ + P+ + +I LC+ GK+ +A+K+F D +G ++ TY +I G C+
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
EA L M + G PN TY ++I K + ++L EM++
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 15/283 (5%)
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+P T TT + D+++A +F +L + P + ++ +K +
Sbjct: 27 FIPYFSTSTT----FHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVL 82
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS--------AL 327
+ +ME G++PN V ++I +FC+ A ++L +L+ Y P++ L
Sbjct: 83 YLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGL 142
Query: 328 CC--KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
C K+ D C GK++DA +L+ +++ +N PD + ++ CKEG++ EAK +
Sbjct: 143 CLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAM 202
Query: 386 FE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+G P ++TYN+L+ G ++ +A +++ M + GV P++ +Y++LI GFCKI
Sbjct: 203 MMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM 262
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
E + +L+EM K PN ++S LI+GL +SG K+V
Sbjct: 263 MDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLV 305
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
IK G + +++ Y L + A F + + V ++S + L+N + K D
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAM 267
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+ K HK +++PNV T + LI LCK + A++++DEM G PN+VT+++IL
Sbjct: 268 ELLKEMHHK-QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 326
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
++NA + + ++G P+ TYT+L+ G + G+L DA KV +++ G N
Sbjct: 327 LCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLN 386
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
TY VMI+ FC EA LL M +P++ +I L ++ + E A +L
Sbjct: 387 VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLC 446
Query: 350 RLLRKN 355
++ N
Sbjct: 447 EMIETN 452
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 243/544 (44%), Gaps = 104/544 (19%)
Query: 35 IKPWPQRLY--PKRLVSMIFRQ---QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHK-L 88
+KP+ L P L+S++ + QN + LQ + Y P+ +H+ + +
Sbjct: 22 LKPYIPHLSTNPSLLISLLNSKTLIQNPNTLLQFYTY---LPPSITHHSPLPLLSLLPSI 78
Query: 89 ARARAFDAVESLLTEL-----------------KQNPEIKC---GENLFITVIRNYGLAG 128
R R F A +SLL+ K N + C + L I Y G
Sbjct: 79 LRYRHFYAAKSLLSSFIPVDKSSSLHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACG 138
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL---MFKNSRHKFKVVPNV 185
RP A + F R+++ +Q ++ + NTLLNALV+ + L +F + K V N
Sbjct: 139 RPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFI-KIGVKINT 197
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+ NILI C ++ AIRVL +M G P+ +T+ TIL G +G + A+ + D
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ ++G P+ TT+ +L+ G +LG L +A V++ M N V P+ TY VMI FCK +
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317
Query: 306 SGEAR-----------------------------------NLLDDMLQRKYVPSSALCCK 330
EA L+++M R P+S
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF---- 386
++ ++GK+++ + +++ C+PD +T+I W CK GK+ EA +L DE
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 387 --------------------------------ERGSIPSLLTYNTLIAGMCESAELTEAG 414
RG ++Y TLI G + + ++A
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
RLWD+M EK + P++ TYN +I G C++G + I L+E+L+ G P++ +++ +I G
Sbjct: 498 RLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGY 557
Query: 475 YESG 478
+ G
Sbjct: 558 CQEG 561
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 191/342 (55%), Gaps = 7/342 (2%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+++ LM +NS VVP+ +T N++I CK+ + A+R+ +EM ++ + P++VT+ T
Sbjct: 288 NVIELMSQNS-----VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNT 342
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G G E ++ ++ RG P++ TY V++ ++K G++ + K + +ME++G
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
P+ VTY +I CK K EA L+D+M ++ ++ LC E K+++A
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
+L R+ D T+I K K +A +L+DE E+ IPS++TYN++IAG+
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ + +A D+++E G+ P+ TYN +I G+C+ G ++ + +M++K P+
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
+ + L+ GL + G + K+ + + G V++ S+N ++
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTII 624
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 210/455 (46%), Gaps = 38/455 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++I+ L + + LL ++K N + F ++ G + A
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDMK-NKGLFPNRTTFNILVVGCCRLGWLKEAANVIEL 292
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + +V + N +++ + R + + K+ P+V T N LI +
Sbjct: 293 MSQNSVVPDAWTYNVMISGFCKQGRIAEA-MRLREEMENLKLSPDVVTYNTLINGCFEHG 351
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
E ++++EM GM PN VT+ ++ +V +G ++ + + + G +PD TY
Sbjct: 352 SSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYN 411
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL------ 313
L+ + K+G++ +A ++MDEM G++ ++VT M+ A C+ +K EA +LL
Sbjct: 412 TLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR 471
Query: 314 -----------------------------DDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
D+M +++ +PS +I LC+ GK A
Sbjct: 472 GYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQA 531
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
+ LL +PD +TIIH C+EG++ +A + ++ E+ P ++T NTL+ G
Sbjct: 532 IDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCG 591
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C+ L +A +L++ + KG + + +YN +I CK E +LEEM +K P+
Sbjct: 592 LCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPD 651
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+++ ++ GL ++G + + +S G E+
Sbjct: 652 CYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 170/338 (50%), Gaps = 2/338 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G E K +E ++ + + N ++ V+ + D V + +P++ T
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEES-GCLPDIVT 409
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI CK ++ A R++DEM G+ + VT T+L ++ A +
Sbjct: 410 YNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSAR 469
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
RG+ D +Y L+ GY K + + A+++ DEM++ + P+ +TY MI C+ K+
Sbjct: 470 RRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A + LD++L+ VP +I C+EG+VE A + +++ KN PD +T++
Sbjct: 530 QAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLL 589
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCKEG + +A KLF+ + +G ++YNT+I +C+ EA L ++M EK +
Sbjct: 590 CGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG 649
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
P+ +TYN ++ G G K+ + ++ +KG N+
Sbjct: 650 PDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQ 687
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 2/365 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S LL ++ + K Y V L F + P+V+T NILI
Sbjct: 134 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTV-LSLSTQMDSFGIPPDVYTLNILI 192
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + A VL ++ +G P+ T T++ G G I A +F + G+
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY LM+G K+G + A++++ M PN + Y +I++ CK ++ EA NL
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P +I LC + + L ++ MP+ + ST++ LCK
Sbjct: 313 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 372
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG I A + D +RG P ++TY L+ G C +E+ EA +++D MV KG PNV +
Sbjct: 373 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 432
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN+LI G+C+I + + +LE+M +G + +++ LI GL G +
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492
Query: 492 ASGSV 496
ASG +
Sbjct: 493 ASGQI 497
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 193/386 (50%), Gaps = 2/386 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G A++ + + N + +V + NT++++L ++++ +F K + P++F
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK-GISPDIF 326
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI ALC + + +L+EM + ++PN+V +T++ G I A V +
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG PD TYT LMDG+ + +AVKV D M G PN +Y ++I +C+ ++
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A LL+ M + + + +I LC G+++ A L+ ++ +PD +
Sbjct: 447 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 506
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ +LCK + EA L E ++ + +L YN I GMC + EL A L+ ++ KG+
Sbjct: 507 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 566
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+P+V TYN++I G CK G E ++ +M + GC + ++ +I G S +
Sbjct: 567 QPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQ 626
Query: 486 VVSMATASGSVESDSWNFLLTRIVSD 511
++ A G S L+ ++SD
Sbjct: 627 LLQEMLAEGFSADVSTTTLIVEMLSD 652
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 203/408 (49%), Gaps = 7/408 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
F + TY ++++ L + A LL + Q C N+ + T+I + +
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK---NCRPNVIAYNTIIDSLCKDRQVT 307
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A F + + + + N+L++AL + V + N K++PNV + +
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL-NEMVNSKIMPNVVVFSTV 366
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ ALCK+ + A V+D M G+ P++VT+T ++ G+ R +++ A +VF ++ +G
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VP+ +Y +L++GY ++ R+ A+ ++++M G+ + VTY +I C + A
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M+ +P ++D LC+ + +A L K + N D + + I +C
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G++ A+ LF +G P + TYN +I G+C+ L EA +L+ M E G +
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGC 606
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
YN +I+GF + ++L+EML +G + ++ +L++E L + G
Sbjct: 607 IYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 6/297 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P +T L+ K+ + + + +M+ G+ P+ T +
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC ++ G A ++L +L+ P + +I LC EGK+ +A L+ + + +
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD T+++ LCK G A +L ++ P+++ YNT+I +C+ ++TEA
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ +M+ KG+ P++FTYN LI C + K +L EM++ PN FS +++ L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370
Query: 475 YESGNEGEVGKVVSMATASGSVESD--SWNFLLTR--IVSDLDSGAGALDELLVKNC 527
+ G VV M G VE D ++ L+ + S++D D ++ K C
Sbjct: 371 CKEGMIAIAHDVVDMMIKRG-VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 160/334 (47%), Gaps = 2/334 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+IH L + V +LL E+ N +I +F TV+ G +A
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMV-NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDM 385
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K V+ V + L++ D +F HK VPNV + NILI C+
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK-GCVPNVRSYNILINGYCQIQ 444
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A+ +L++M G++ + VT+ T++ G G +++A +F +++ G +PD TY
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+D K L +A+ ++ +E + ++ + + Y + I+ C+ + AR+L ++ +
Sbjct: 505 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSK 564
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I LC+ G +++A +L++++ C D I +TII + + + A
Sbjct: 565 GLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGA 624
Query: 380 KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA 413
+L E + ++ TLI M L ++
Sbjct: 625 TQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQS 658
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 170/307 (55%), Gaps = 1/307 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K +VP+ + +I LC D+ A ++L++M G+ PN+V ++T++ GY G IE
Sbjct: 143 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 202
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+R+ + G PD Y ++ K G++ +A + E++ G++P+ VT+G I
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 262
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ K K EA D+ML +P++ L +I+ + G + +A +++ L +
Sbjct: 263 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 322
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD S IH L K G++ EA K+F E E+G +P + TY++LI+G C+ E+ +A L
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
D+M KG+ PN+F YN L+ G CK G+ + ++ + M +KG P+ ++S +I+G +
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 442
Query: 477 SGNEGEV 483
S N E
Sbjct: 443 SENVAEA 449
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 196/411 (47%), Gaps = 55/411 (13%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L+ +I + AG A+ F + V V++ + ++ L++N R +F
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ K +VP+VFT + LI CK+ +VE A + DEM G+ PN+ + ++ G GD
Sbjct: 352 KEK-GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 410
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I+ A+++F + ++G PD+ TY+ ++DGY K + +A + EM GV+P+ Y
Sbjct: 411 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 470
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ CK +A NL +MLQ+ + + + +ID C+ K+++A +L++ ++ K
Sbjct: 471 LVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQEASQLFQEMIAKQ 529
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE------------------RGSIPSLLTY 397
MPD+ +T+I W CK GK+ EA LF E + +G P +TY
Sbjct: 530 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTY 589
Query: 398 -----------------------------------NTLIAGMCESAELTEAGRLWDDMVE 422
+ LI +C+ +LTEA +L D+M E
Sbjct: 590 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 649
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
G++P++ + L++ F + G E R+ E + G P+ T+ L+ G
Sbjct: 650 LGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 221/473 (46%), Gaps = 64/473 (13%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++II L++A + + L E+ Q +K F I Y G+ A K F +
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 281
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLM-----FKNSRHKFKVVPNVFTCNILIKAL 195
+ + N L L+ N + +LM F++ H V+P+V TC+ I L
Sbjct: 282 ----LDHGLMPNNPLYTVLI-NGHFKAGNLMEALSIFRH-LHALGVLPDVQTCSAFIHGL 335
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
K V+ A++V E+ G+VP++ T+++++ G+ +G++E A + ++ +G P+
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+DG K G + A K+ D M + G+EP+ VTY MI+ +CK + EA +L +
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455
Query: 316 MLQRKYVPSSAL-------CCK---------------------------VIDLLCEEGKV 341
M + P S + CCK +ID C+ K+
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 515
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-------------- 387
++A +L++ ++ K MPD+ +T+I W CK GK+ EA LF E +
Sbjct: 516 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFE 575
Query: 388 ----RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+G P +TY +I C+ L EA +L D++V KG+ +++LI CK
Sbjct: 576 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 635
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ E ++L+EM + G P+ + S L+ +E+G E +V + G V
Sbjct: 636 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLV 688
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 176/362 (48%), Gaps = 20/362 (5%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++PN +LI K ++ A+ + + ++G++P++ T + + G + G ++ A
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 345
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+VF ++ ++G VPD TY+ L+ G+ K G + A ++ DEM G+ PN Y +++
Sbjct: 346 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK AR L D M ++ P S +ID C+ V +A L+ + K P +
Sbjct: 406 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 465
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + ++H CKEG + +A LF E + + L++NTLI G C+S ++ EA +L+ +M
Sbjct: 466 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEM 525
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEG-----------------IRILEEMLDKGCFPN 463
+ K + P+ TY +I CK G +E + E+M+ KG P+
Sbjct: 526 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPD 585
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV---SDLDSGAGALD 520
+ ++ L+I + N E K+ G + + + LL + DL + LD
Sbjct: 586 EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 645
Query: 521 EL 522
E+
Sbjct: 646 EM 647
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 157/300 (52%), Gaps = 1/300 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VPN +T I+ LC+ + A +EM G+ P+ + ++ G++ GDI+
Sbjct: 6 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 65
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R+ ++ G + TY VL+ G K G++ A +++ M G +PN T+ ++IE +
Sbjct: 66 RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGY 125
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ G A LLD+M +R VPS+ +I+ LC + A +L +++ P+
Sbjct: 126 CREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 185
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ ST+I EG+I EA++L D G P + YN +I+ + ++ ++ EA +
Sbjct: 186 VVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 245
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ +G++P+ T+ I G+ K G E + +EMLD G PN +++LI G +++GN
Sbjct: 246 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 305
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 132/276 (47%), Gaps = 1/276 (0%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+VPN T+T I G + AK F ++ G PD + L+DG+++ G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + +++ D M G+ N +TY V+I CK K +A +L M+ P+S C
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+I+ C E + A EL + ++N +P +I+ LC + A KL ++ G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+++ Y+TLI G + EA RL D M GV P++F YN +I K G +E
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
L E+ +G P+ +F I G ++G E K
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 276
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 7/243 (2%)
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M + G+ PN TY ++ C+ K+ EA+ ++M + P C +ID EG
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 341 VEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN 398
+++ + K ++ +P N I+ + +IH LCK GK+ +A ++ G P+ T+
Sbjct: 61 IDEVLRI-KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
LI G C + A L D+M ++ + P+ +Y +I G C + ++LE+M
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGA 518
G PN +S LI G G E +++ + SG V D F I+S L S AG
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG-VAPDI--FCYNAIISCL-SKAGK 235
Query: 519 LDE 521
++E
Sbjct: 236 MEE 238
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 56/300 (18%)
Query: 115 NLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
N+FI GL +G + A K F + + ++ + +T+++ +++ +F
Sbjct: 394 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 453
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K V P+ F N L+ CK+ D+E A+ + EM G L + T++ GY
Sbjct: 454 HEMPSK-GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCK 511
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED--------- 283
I+ A ++F +++ + +PD TYT ++D + K G++ +A + EM++
Sbjct: 512 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVF 571
Query: 284 --------NGVEPNEVTYGVMI----------EAF------------------------- 300
GV+P+EVTYG++I EAF
Sbjct: 572 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + EA LLD+M + PS A C ++ E GK+++A +++ + +PD
Sbjct: 632 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 691
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 127/297 (42%), Gaps = 24/297 (8%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + ++ + +N+ A +FH + P H++ Y++++H + +
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP---HSF-VYNALVHGCCKEGDMEK 483
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+L E+ Q F T+I Y + + + A + F + + + T++
Sbjct: 484 AMNLFREMLQKGFATTLS--FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 541
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVF----------------TCNILIKALCKKDD 200
+ + + + +L+FK + + +V VF T ++I A CK+D+
Sbjct: 542 DWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 601
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A ++ DE+ GM+ H ++ R D+ A ++ ++ + G P +
Sbjct: 602 LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACST 661
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ + + G++ +A +V + ++ G+ P+ T ++ S +ARNL+ ++
Sbjct: 662 LVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 226/480 (47%), Gaps = 30/480 (6%)
Query: 9 ITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAG 68
+ A LLQ + A C+ + +T T I + P + + R
Sbjct: 26 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM-------------- 71
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYG 125
+ TY+S+IH L A D +L EL +N P L I R
Sbjct: 72 -LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRR 130
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVP 183
L L + LR N+ + + A Q+ RY+ M ++ R +P
Sbjct: 131 LDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGR-----IP 185
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+V T N I LCK ++ + +L+EM G+ P++VT +I+ G I++A +VF
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME--DNGVEPNEVTYGVMIEAFC 301
+L+RG VPD+ TY++++D + RL +V++ M+ G T+ I A C
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALC 305
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM-PDN 360
+ K A+N+L M++ +P+ VID LC+ G V+DA +L +++L C PD
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWD 418
+T+I CK G++ +A +L E + +I P ++TYNTLI G + L +A L
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQ 425
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M G +PNV TY LI G+ K G +E + +EM KGCFP+ +++ ++ ++G
Sbjct: 426 EMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAG 485
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 169/365 (46%), Gaps = 50/365 (13%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+V T LI LCK D++ A +L +M G PN+VT+T ++ G +A +
Sbjct: 9 SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 68
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+L G PD TY L+ G R+ DA V+ E+ NG PN +TY ++ C+
Sbjct: 69 KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR 128
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK-------RLLRKNC 356
++ +AR L+ +M+ R ++C V+ + C G E C+ + ++
Sbjct: 129 RRLDQARGLIREMILR-----GSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGR 183
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
+PD +T I LCK GK+ + ++ +E +RG I P ++T+ ++I+G+C++ + +A +
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQ 243
Query: 416 LWDDMVEKGVEPN-------------------------------------VFTYNMLIQG 438
++ M+E+G P+ V+T+N I
Sbjct: 244 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
C+ G IL M++ G PN S++ +I+GL +SGN + K+ SG +
Sbjct: 304 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 363
Query: 499 DSWNF 503
D F
Sbjct: 364 DVIFF 368
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 147/280 (52%), Gaps = 3/280 (1%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G ++VT+TT++ G GD++ A+ + + D G P+ TYT L+DG K R
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
DA++ + M +G EP+ VTY +I C + +A +L ++++ + P+
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK---EGKIWEAKKLFDEFE 387
++ C +++ A L + ++ + + + + I C+ + +E + + E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G IP ++TYNT I+G+C++ +L + + ++M G+ P+V T+ +I G CK +
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
++ + ML++GC P+ ++S++++ L + V +V+
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVL 280
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 194/410 (47%), Gaps = 14/410 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++ I L +A D +L E+ + P++ F ++I A R + A +
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVV----TFCSIISGLCKANRIDDAFQV 244
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKAL 195
F + + + + +L+ L + R D V + ++ + K V V+T N I AL
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PD 254
C+ A +L M G +PNL+++ ++ G G++++A ++ +LD G PD
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ L+ G+ K GRL+ A +++ EM+ N P+ VTY +I+ K +A+ LL
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLL 424
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M P+ +I+ + G E+A L+ + K C PD +T++ K
Sbjct: 425 QEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKA 484
Query: 374 GKIWEAKKLFDEFERGSI---PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
G + +A+ ++ + + + P +TY LI G C + + + L +M +G + +
Sbjct: 485 GMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSY 544
Query: 431 TYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
TYN+LI + + + + ++MLD+ C P+ + F+ L+ +G+
Sbjct: 545 TYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGD 594
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 167/360 (46%), Gaps = 10/360 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L ++ + R LD ++ + T+++ I L R+ F +
Sbjct: 255 PDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAK 314
Query: 99 SLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTL 155
++L + ++ + NL + VI +G + A K + ++ + V NTL
Sbjct: 315 NILLGMIESGSLP---NLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 371
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ + R H + + K VP+V T N LI K ++ A +L EM ++G
Sbjct: 372 ISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVG 431
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
PN+VT+ ++ GY G E A+ +F ++ +G PD TY ++ + K G ++ A
Sbjct: 432 CKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAE 491
Query: 276 KVMDEMEDNG--VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
V ++++ P+ +TY ++I+ +C+ + + + LL +M R + S +I
Sbjct: 492 GVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIA 551
Query: 334 LLCEEGKV-EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
L E +V A +++++L ++C+P +I ++++ + G + A+ + E E+G +
Sbjct: 552 KLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHL 611
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M G + +V TY LI G CK G+ +L++M D GC PN +++ LI+GL ++
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 480 EGEVGKVVSMATASGSVESD--SWNFLLTRI-VSDLDSGAGALDELLVKN 526
+ + V SG E D ++N L+ + +++ AG + + LV+N
Sbjct: 61 PHDAIQTVKRMLRSG-CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRN 109
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 243/512 (47%), Gaps = 64/512 (12%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPWP---QRLYP---KRLVSMIFRQQNL-DLALQIFHYA 67
L + GA S +TV + P ++L P +V+ + R+Q +L + F +
Sbjct: 28 LFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWT 87
Query: 68 GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA 127
+ ++ T++ +I LA+ FD +L ELK N I+ F +I Y +
Sbjct: 88 TRRRS--FRSWVTHNLVIDMLAKDDGFDTYWKILEELK-NSNIQIPPPTFSVLIAAYAKS 144
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G E AV++F +++ F + V + N++L+ +VQ + + L+ L N K PN T
Sbjct: 145 GMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVF-LLALAVYNQMLKLNYNPNRAT 203
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
IL+ LCK + A+++ DEM G+ PN + +T IL G ++ R+ +
Sbjct: 204 FVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK 263
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVM----------------------------D 279
G PD+ T L+DG+ KLG++ +A ++ D
Sbjct: 264 VSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYD 323
Query: 280 EMED-------NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
E+++ G+EP+ V Y ++I FC+ A N+L+DM QR P + +I
Sbjct: 324 EVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALI 383
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSI 391
C+ G ++ A L + + +C P + + +I +C+ G + EA+++F++ E G
Sbjct: 384 KGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCS 443
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF------------TYNMLIQGF 439
PS++T+N LI G+C++ EL EA L+ M E G P++F T N GF
Sbjct: 444 PSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTAN----GF 498
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
++ ++ R+L++M+ GC P+ + L+
Sbjct: 499 HRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 530
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 183/372 (49%), Gaps = 4/372 (1%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFT 187
RPEL + F+ + RS + N +++ L ++ +D + + ++ ++ P F+
Sbjct: 76 RPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFS 135
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+LI A K E A+ +M G P++ T+ +IL V + A V+ +L
Sbjct: 136 --VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQML 193
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ P+ T+ +L++G K G+ DA+K+ DEM G+ PN + Y +++ C+ K++
Sbjct: 194 KLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+ LL+ M P S C ++D C+ G++++A L + ++ + S++I
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLI 313
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + + E ++ + F+ G P ++ Y LI G CE + A + +DM ++G+
Sbjct: 314 DGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS 373
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ + YN LI+GFC +G + + E+ CFP ++++LI G+ +G E ++
Sbjct: 374 PDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQI 433
Query: 487 VSMATASGSVES 498
+ G S
Sbjct: 434 FNQMENLGCSPS 445
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 199/417 (47%), Gaps = 23/417 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PE-IKCGENLFITVIRNYGLAGRPEL 132
N Y I+ L +A+ D V LL +K + P+ I C ++ + G+ +
Sbjct: 235 NTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCN-----ALLDGFCKLGQIDE 289
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK--VVPNVFTCNI 190
A EK ++ ++L++ L + KRYD V + R FK + P+V I
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ---EWCRKMFKAGIEPDVVLYTI 346
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI+ C+ V+ A+ +L++M G+ P+ + ++ G+ G ++ A+ + +I
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P + TYT+L+ G + G L +A ++ ++ME+ G P+ +T+ +I+ CK + EAR
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466
Query: 311 NLLDDMLQRK----YVPSSALCCKVIDLLCEEGKV---EDACELWKRLLRKNCMPDNAIS 363
+L M K ++ S +V+D +V EDA + ++++ C P +A+
Sbjct: 467 HLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVY 526
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG-MCESAELTEAGRLWDDMVE 422
++ W C++GK+ A L+ ++ R S+PS +A E EL +A R +M
Sbjct: 527 KCLMTWSCRKGKLSVAFSLWLKYLR-SLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNF 585
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
K + Y + + G C+ ++E ++I + + N S +LI GL + GN
Sbjct: 586 KLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGN 642
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 217/475 (45%), Gaps = 80/475 (16%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFH-YAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
P + +L+ +F + +D A+Q+ H HP+ Y++II RA D+
Sbjct: 90 PDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLI----AYNAIITGFCRANRIDSA 145
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+L +K N G + P++ + N L+
Sbjct: 146 YQVLDRMK-----------------NKGFS--PDIV-----------------TYNILIG 169
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+L D L FKN K P V T ILI+A + ++ A+++LDEM + +
Sbjct: 170 SLCSRGMLDSA-LEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQ 228
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ T+ +I+ G G ++ A ++ I +G+ PD TY +L+ G + G+ ++
Sbjct: 229 PDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYEL 288
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
M +M G E N VTY V+I + C+ K E LL DM ++ P +I LC+
Sbjct: 289 MSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCK 348
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE------------ 385
EG+V+ A E+ ++ C+PD +TI+ LCK+ + EA +F++
Sbjct: 349 EGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASS 408
Query: 386 ------------------------FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++G P +TYN+LI+ +C + EA L DM
Sbjct: 409 YNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDME 468
Query: 422 EKGVE--PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ E P+V +YN+++ G CK+ + I +L M+DKGC PN+T+++ LIEG+
Sbjct: 469 MESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 162/342 (47%), Gaps = 14/342 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA----RAFDAVESLLT 102
L+ Q +D A+++ N + TY+SII + R RAF + S+ +
Sbjct: 202 LIEATLLQGGIDEAMKLLDEM--LEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISS 259
Query: 103 ELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ P++ + ++R G+ E + + + +V + + L++++ ++
Sbjct: 260 K-GYAPDVI----TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRD 314
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ + + K+ + K + P+ + + LI ALCK+ V+ AI VLD M S G VP++V
Sbjct: 315 GKVEEGVGLLKDMKKK-GLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVN 373
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ TIL + + A +F + + G P+A++Y + G A+ ++ EM
Sbjct: 374 YNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEML 433
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-LQRKYVPSSALCCKVIDL-LCEEGK 340
D GV+P+ +TY +I C+ EA LL DM ++ S + ++ L LC+ +
Sbjct: 434 DKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSR 493
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
V DA E+ ++ K C P+ + +I + G + +A+ L
Sbjct: 494 VSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 113/231 (48%), Gaps = 5/231 (2%)
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK E+ L ++ + + P LC K+I L ++ A ++ +L + PD
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDL 126
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ II C+ +I A ++ D + +G P ++TYN LI +C L A +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++++ +P V TY +LI+ G E +++L+EML+ P+ +++ +I G+ G
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+++S ++ G + + ++N LL +++ ++G + +++ + C
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGC 297
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 150/335 (44%), Gaps = 18/335 (5%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
I P ++ + R+ +D A QI ++ + TY+ ++ L +
Sbjct: 225 INLQPDMFTYNSIIRGMCREGYVDRAFQIISSISS--KGYAPDVITYNILLRGLLNQGKW 282
Query: 95 DAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+A L++++ C N+ + +I + G+ E V ++K ++
Sbjct: 283 EAGYELMSDMVAR---GCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCY 339
Query: 153 NTLLNALVQNKRYDL----VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ L+ AL + R DL + +M + VP++ N ++ LCK+ + A+ +
Sbjct: 340 DPLIAALCKEGRVDLAIEVLDVMISDG-----CVPDIVNYNTILACLCKQKRADEALSIF 394
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+++ +G PN ++ ++ G A + ++LD+G PD TY L+ +
Sbjct: 395 EKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRD 454
Query: 269 GRLTDAVKVMD--EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
G + +A++++ EME + +P+ V+Y +++ CK + +A +L M+ + P+
Sbjct: 455 GMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNET 514
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+I+ + G + DA +L L+ + + +++
Sbjct: 515 TYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHS 549
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 185/367 (50%), Gaps = 48/367 (13%)
Query: 151 SLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ NTL+NAL+ R + L+ M N P + T ++IK LCK+ ++E A R
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAANG-----CPPELITFGLIIKGLCKEGEIEAAFR 192
Query: 207 VLDEMPSM--GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
V+DEM + G+ P+++T ++L G I +A VF L+RG P+ TY+ L+DG
Sbjct: 193 VVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 252
Query: 265 Y-----------------------------------IKLGRLTDAVKVMDEMEDNGVEPN 289
+K+GR+ DAV V+ +M D G P+
Sbjct: 253 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 312
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VTY +I+ F K ++ EA LL +ML+ + PS + LC G+ ++A E+
Sbjct: 313 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 372
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCES 407
+ + C P+ S+I+ LCK G++ EA F++ R + P ++ Y+ LI G+C++
Sbjct: 373 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 432
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
++ EA + M+ G P+V T+++LI G C G G+ + M ++GC P+ ++
Sbjct: 433 GKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTY 492
Query: 468 SLLIEGL 474
+ L++ L
Sbjct: 493 ATLVDRL 499
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 217/419 (51%), Gaps = 16/419 (3%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPEL 132
N TY+++++ L + R+ +A SLL ++ N PE+ F +I+ G E
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAF-SLLEQMAANGCPPELI----TFGLIIKGLCKEGEIEA 189
Query: 133 A---VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
A V IE + V + N++L+ L + +R H +FK + + PNV T +
Sbjct: 190 AFRVVDEMFMIES-GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER-GCRPNVVTYS 247
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI L K ++ A+++L +M +G N VT++T++ G + G +E+A V + D
Sbjct: 248 TLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G +PDA TY L+DG+ K RL +AV ++ EM + G P+ VTY + C+ + EA
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIH 368
+LD M R P++ ++D LC+ G+V +A ++++ R + + I+ S +I
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 427
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK GKI EA + + R G IP ++T++ LI G+C++ + L+ M E+G P
Sbjct: 428 GLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVP 487
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
++ TY L+ C+ E + ++M G P++++ +I GL E + + ++
Sbjct: 488 DMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 201/405 (49%), Gaps = 10/405 (2%)
Query: 84 IIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+I L ++R D +L ++ P++ + +I G R + A F
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVV----TYGALIDGLGKQRRVKEAYDLFEEA 56
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+V + NT+++ L + R + ++ + F P V T + LI LC+ +
Sbjct: 57 RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHE 116
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ ++L+EM G PN VT+ T++ + +G + A + + G P+ T+ +
Sbjct: 117 VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGL 176
Query: 261 LMDGYIKLGRLTDAVKVMDEME--DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++ G K G + A +V+DEM ++G+ P+ +T+ +++ CK ++ +A N+ L+
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R P+ +ID L + K+++A +L +++ C + ST++ L K G++ +
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + + + G +P +TYNTLI G + L EA L +M+E G P+V TY L
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G C+ G E + IL+ M +GC PN ++S +++GL ++G E
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 171/320 (53%), Gaps = 5/320 (1%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LCK V+ AI + +M + P++VT+ ++ G + ++ A +F + +G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN-GVEPNEVTYGVMIEAFCKGKKSGEA 309
P TY ++DG K GR+ +A+ + D+M + G P VTY +I+ C+ + +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LL++M R P++ +++ L +G+ ++A L +++ C P+ II
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 370 LCKEGKIWEAKKLFDEF---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCKEG+I A ++ DE E G P ++T+N+++ G+C+ + +A ++ +E+G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGK 485
PNV TY+ LI G K+ E +++L +M++ GC N ++S +++GL + G E V
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300
Query: 486 VVSMATASGSVESDSWNFLL 505
+ M A ++ ++N L+
Sbjct: 301 LRQMRDAGCLPDAVTYNTLI 320
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 15/316 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY ++I L++ D LL ++ E+ C N + TV+ GR E AV
Sbjct: 242 NVVTYSTLIDGLSKMAKMDEALQLLAKM---VELGCRANTVTYSTVVDGLLKVGRMEDAV 298
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNI 190
++ + NTL++ + +R L+ M + H P+V T
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH-----PSVVTYTT 353
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL-DR 249
L LC+ + A+ +LD M + G PN +T+++I+ G G + A F + D
Sbjct: 354 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 413
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
P Y+ L+DG K G++ +A + ++ M G P+ VT+ ++I C +
Sbjct: 414 VVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 473
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L M +R VP ++D LC +V++A +L++++ PD + T+IH
Sbjct: 474 LELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533
Query: 370 LCKEGKIWEAKKLFDE 385
L + + +AK++ DE
Sbjct: 534 LLEVNRDEDAKRIQDE 549
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 243/507 (47%), Gaps = 42/507 (8%)
Query: 25 SLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKF--HPNFSHNYDTYH 82
+LST +P P + RL++ I + ++ L + F P+ +
Sbjct: 29 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 88
Query: 83 SIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK 142
S+ H AF A+ +L +L P+ F T+IR + G+ A+ F ++
Sbjct: 89 SLCHLNRVDFAFSALAKIL-KLGHQPD----ATTFTTLIRGLCVEGKIGEALHLFDKMIG 143
Query: 143 FNVQRSVRSLNTLLNALVQNKRY-----------------------DLVHLMFK------ 173
Q +V + TL+N L ++++ L+H + K
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203
Query: 174 -----NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
N K++P+VFT N ++ ALCK+ V A V+D M G+ PN+VT+ ++
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G+ R +++ A +VF ++ + V + +Y L++GY K+ + A+ + +EM + P
Sbjct: 264 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 323
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N VTY +I C + +A +L +M+ R +P + D LC+ ++ A L
Sbjct: 324 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 383
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCES 407
K + N PD I +TI+ +C+ G++ +A+ LF +G P++ TYN +I G+C+
Sbjct: 384 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 443
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L EA +L+ +M + G PN TYN++ +GF + A I +LEEML +G + ++
Sbjct: 444 GLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTT 503
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+LL+ L + G + V +++ ++S
Sbjct: 504 TLLVGMLSDDGLDQSVKQILCKPSSSS 530
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 199/414 (48%), Gaps = 24/414 (5%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCG 113
LD AL F+ HP S D + ++ +A+ + + V SL T++ P++
Sbjct: 562 LDDALSSFNRMLHMHPPPS-TVD-FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
L I ++ R A ++ K Q V + TL+N L + ++ K
Sbjct: 620 NIL----INSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK--------MITK 667
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ P++FT N LI ALC + + +L+EM + ++PN+V +T++
Sbjct: 668 G------ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G I A V ++ RG PD TYT LMDG+ + +AVKV D M G PN +Y
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++I +C+ ++ +A LL+ M + + + +I LC G+++ A L+ ++
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTE 412
+PD ++ +LCK + EA L E ++ + +L YN I GMC + EL
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
A L+ ++ KG++P+V TYN++I G CK G E ++ +M + + N TS
Sbjct: 902 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 179/377 (47%), Gaps = 24/377 (6%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S LL ++ + K Y V L F + P+V+T NILI
Sbjct: 565 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTV-LSLSTQMDSFGIPPDVYTLNILI 623
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG---YVWRG---DI---------- 236
+ C + A VL ++ +G P++VT+ T++ G + +G DI
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHAL 683
Query: 237 ------ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
++ + ++++ +P+ ++ ++D K G + A V+D M GVEP+
Sbjct: 684 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 743
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +++ C + EA + D M+ + VP+ +I+ C+ +++ A L ++
Sbjct: 744 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 803
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ + + D +T+IH LC G++ A LF E G IP L+TY L+ +C++
Sbjct: 804 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 863
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L EA L + ++ ++ YN+ I G C+ G + + + KG P+ ++++
Sbjct: 864 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNI 923
Query: 470 LIEGLYESGNEGEVGKV 486
+I GL + G E K+
Sbjct: 924 MIHGLCKRGLLDEANKL 940
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 159/339 (46%), Gaps = 18/339 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ L+ ++ K + + +M S G+ P++ T ++ + + A V
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L G+ PD TY LM+G K M G+ P+ TY +I A C
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCN 685
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ LL++M+ K +P+ + V+D LC+EG + A ++ ++++ PD
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++ C ++ EA K+FD +G +P++ +YN LI G C+ + +A L + M
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+G+ + TYN LI G C +G + I + EM+ G P+ ++ +L++ L ++ +
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865
Query: 482 EVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALD 520
E V+ A ++++D L+ I D AG L+
Sbjct: 866 E-AMVLLKAIEGSNLDAD---ILVYNIAIDGMCRAGELE 900
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 14/299 (4%)
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ ++ A+ + M M P+ V T +L + + G PD T
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L++ + L RL A V+ ++ G +P+ VTYG ++ CK M+
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MIT 666
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +I LC + + L ++ MP+ + ST++ LCKEG I
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + D +RG P ++TY L+ G C +E+ EA +++D MV KG PNV +YN+LI
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G+C+I + + +LE+M +G + +++ LI GL G + ASG +
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 845
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+H T + ++ A F +L + P + L+ K + + + +M
Sbjct: 12 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G+ P+ T ++I + C + A + L +L+ + P + +I LC EGK+
Sbjct: 72 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
+A L+ +++ + P+ T+I+ LCK+ ++ EA +F E +G P+++TYN+L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G+C+ E L ++MV+ + P+VFT N ++ CK G E +++ M+ +G
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251
Query: 461 FPNKTSFSLLIEG 473
PN +++ L++G
Sbjct: 252 EPNVVTYNALMDG 264
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 221/435 (50%), Gaps = 5/435 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ + P RL S++ Q + LALQ+F F + + +Y II KL R+R F +E
Sbjct: 4 PKPISPFRLSSLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEME 63
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+L++L++ E +F VI YG A P+ A++TF I +F QR+V+SLN+LLNA
Sbjct: 64 QILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNA 123
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L++ K ++ + + KF P+V T N+LI A C + A V DEM + P
Sbjct: 124 LLKCKEFEKFDGIL-SGIDKF-ATPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCP 181
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKV 277
N+VT T++ G ++ A R+ D++ V P+A Y LM G ++ L+ A ++
Sbjct: 182 NVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFEL 241
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
EM N + + Y +I A K + E +L++M + P + +I C
Sbjct: 242 KKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCN 301
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
E E A + + ++ K C PD + II LCKEGK EA LF++ RG P + +
Sbjct: 302 EKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGS 361
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y L G+CE + EA + D+MV KG P + ++ C+ GN + ++L ++
Sbjct: 362 YRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLV 421
Query: 457 DKGCFPNKTSFSLLI 471
KG + ++SL +
Sbjct: 422 -KGNVIDGDAWSLAV 435
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 174/385 (45%), Gaps = 13/385 (3%)
Query: 41 RLYPKRLV-----SMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
R PK ++ S R + D A+Q F +F + +S+++ L + + F+
Sbjct: 74 RFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFR--CQRTVKSLNSLLNALLKCKEFE 131
Query: 96 AVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
+ +L+ + + P++ C N+ I + G G A F + + +V +V +
Sbjct: 132 KFDGILSGIDKFATPDV-CTYNVLINACCSSGSLGD---AWNVFDEMLRKHVCPNVVTFG 187
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
TL++ L + R D + ++ F V PN F L+K LC+ +++ A + EM +
Sbjct: 188 TLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVA 247
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+ + ++T++ G + V ++ + G PD TY ++ G+
Sbjct: 248 NKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEA 307
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A V++EM G +P+ ++Y V+I CK K EA +L +DM +R P + D
Sbjct: 308 AYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFD 367
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS 393
LCE + +A + ++ K P +A + + LC+EG + K+ + +G++
Sbjct: 368 GLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVKGNVID 427
Query: 394 LLTYNTLIAGMCESAELTEAGRLWD 418
++ ++ +C+ +L+ L D
Sbjct: 428 GDAWSLAVSKVCKKEKLSNGSELVD 452
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRL 416
PD + +I+ C G + +A +FDE R + P+++T+ TLI+G+C + L EA RL
Sbjct: 146 PDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRL 205
Query: 417 WDDMVEK-GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+DMV+ V+PN F Y L++G C++ + +EM+ + +S LI L+
Sbjct: 206 KEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALF 265
Query: 476 ESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVS--DLDSGAGALDELLVKNC 527
+ G + EV V+ +G ++ ++N +++ + D ++ G L+E++ K C
Sbjct: 266 KVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGC 320
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 199/399 (49%), Gaps = 10/399 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ FH+ H + H+ ++ I AR V SL+ ++ + I F
Sbjct: 73 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR-SLRIGPSPKTFAI 131
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
V Y AG+P+ AVK FL + + + + S NT+L+ L ++KR + + +F+ R +F
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V + T N+++ C A+ VL EM G+ PNL T+ T+L G+ G I +A
Sbjct: 192 SV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
F ++ R D TYT ++ G+ G + A V DEM GV P+ TY MI+
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK A + ++M++R Y P+ +I L G+ EL +R+ + C P+
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMC---ESAELTEAGR 415
+ +I + + ++ +A LF++ G +P+L TYN LI+GM S ++ AG+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGK 429
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGN---AKEGIRI 451
L +MVE+G P FT+N ++ G GN AKE +R+
Sbjct: 430 LLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRL 468
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 7/312 (2%)
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ L+H M ++ P+ T I+ + + A+++ M G +L +
Sbjct: 111 WSLIHRM-----RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFN 165
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
TIL +E A +F + R V D TY V+++G+ + R A++V+ EM +
Sbjct: 166 TILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ PN TY M++ F + + A +M +R V+ G+++ A
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
++ ++R+ +P A + +I LCK+ + A +F+E RG P++ TYN LI G
Sbjct: 285 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + E + L M +G EPN TYNM+I+ + + ++ + + E+M C PN
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Query: 464 KTSFSLLIEGLY 475
++++LI G++
Sbjct: 405 LDTYNILISGMF 416
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 153/302 (50%), Gaps = 3/302 (0%)
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
++ M S+ + P+ T + Y G + A ++F ++ + G D ++ ++D
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K R+ A ++ + + VTY V++ +C K++ +A +L +M++R P+
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
++ G++ A E + + +++C D +T++H G+I A+ +FDE
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 387 ER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
R G +PS+ TYN +I +C+ + A ++++MV +G EPNV TYN+LI+G G
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYE-SGNEGEVGKVVSMATASGSVESDSWNFL 504
G +++ M ++GC PN +++++I E S E +G M + D++N L
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 505 LT 506
++
Sbjct: 412 IS 413
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 3/176 (1%)
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L+ M + PS V + GK + A +L+ + C D A +TI+ L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
CK ++ +A +LF +TYN ++ G C +A + +MVE+G+ PN+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
TYN +++GF + G + EM + C + +++ ++ G G GE+ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF---GVAGEIKRA 284
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 208/417 (49%), Gaps = 6/417 (1%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
+F N H++ TY+ + L +A D + +K + I L ++ ++ G
Sbjct: 94 RFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDG-ISPNSRLLGFLVSSFAEKG 152
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
+ L T L ++ + V+ +N+LLN LV+ R + +F+ +F+ + T
Sbjct: 153 K--LHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFE-EHLRFQSCNDTKTF 209
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI-L 247
NILI+ LC E A+ +L M G +P++VT+ T++ G+ +++ A +F D+
Sbjct: 210 NILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKS 269
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G PD TYT ++ GY K G++ +A ++D+M G+ P VT+ V+++ + K +
Sbjct: 270 SSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMH 329
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A + M+ P +ID C G+V LW+ + + P+ S +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ LCKE ++ +A++L + + IP YN +I G C++ ++ EA + ++M +K +
Sbjct: 390 NALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCK 449
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
P+ T+ +LI G C G E + I +M+ GC P+K + S L+ L ++G E
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 181/377 (48%), Gaps = 5/377 (1%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+ R+ AG +LA + F ++ + + R L L+++ + + + S +
Sbjct: 109 LTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS---Y 165
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+V N L+ L K D VE A+++ +E + T ++ G G E A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN-GVEPNEVTYGVMIE 298
+ G + G +PD TY L+ G+ K L A ++ D+++ + G P+ VTY MI
Sbjct: 226 VELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMIS 285
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K EA LLDDML+ P++ ++D + G++ A E+ +++ C P
Sbjct: 286 GYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFP 345
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I C+ G++ + +L++E RG P+ TY+ LI +C+ L +A L
Sbjct: 346 DVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELL 405
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ K + P F YN +I GFCK G E I I+EEM K C P+K +F++LI G
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 478 GNEGEVGKVVSMATASG 494
G E + A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +IR G+ E AV+ + F + + NTL+ ++ + MF + +
Sbjct: 209 FNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVK 268
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
P+V T +I CK ++ A +LD+M +G+ P VT ++ GY G++
Sbjct: 269 SSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ + G ++ G PD T+T L+DGY ++G++ ++ +EM G+ PN TY ++
Sbjct: 329 HTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I A CK + +AR LL + + +P + VID C+ GKV +A + + + +K C
Sbjct: 389 INALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKC 448
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD + +I C +G+++EA +F + G P +T ++L++ + ++ EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 416 LWDDMVEKG 424
L + + KG
Sbjct: 509 L-NQIAHKG 516
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 176/331 (53%), Gaps = 2/331 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ N ++ +LV+ K Y +FK + K + P++FT NILI C + + VL
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVK-GIEPDLFTLNILINCFCHLGQMTFSFTVL 68
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
++ +G PN +T T++ G +G+++ + ++ +G+ D +Y L++G K+
Sbjct: 69 GKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKI 128
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G A+K++ +ED PN V Y +I+ CK K EA +L +M R P+
Sbjct: 129 GETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITY 188
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
+I C G++ +A L ++ KN P+ + ++ LCKEGK+ EAK L +
Sbjct: 189 STLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTK 248
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P++++YNTL+ G C E+ A +++ MV+KGV PNV++YN++I CK E
Sbjct: 249 EGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDE 308
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +L E+L K PN ++S LI+G + G
Sbjct: 309 AMNLLREVLHKNMVPNTVTYSSLIDGFCKLG 339
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 188/349 (53%), Gaps = 6/349 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV N +I LCK V A + EM + G+ PN++T++T++ G+ G + A +
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGL 207
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ + P+ TYT+LMD K G++ +A ++ M GV+PN V+Y +++ +C
Sbjct: 208 LNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCL 267
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A+ + M+Q+ P+ +ID LC+ +V++A L + +L KN +P+
Sbjct: 268 IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVT 327
Query: 363 SSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S++I CK G+I A L E + RG ++TY +L+ +C++ L +A L+ M
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
E+G++PN +TY LI G CK G K ++ + +L KGC N +++++I GL + G
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447
Query: 482 EVGKVVSMATASGSVESDSWNF-LLTRIVSDLDSGAGA---LDELLVKN 526
E + S +G + D+ F ++ R + + D A L E++ K+
Sbjct: 448 EALAMKSKMEENGCI-PDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKD 495
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 151/296 (51%), Gaps = 1/296 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + N ++ +L K AI + +M G+ P+L T ++ + G + + V
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
G IL G+ P+ T LM G G + ++ D++ G + ++V+Y ++ CK
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ A LL + R P+ + +ID LC++ V +A +L+ + + P+
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
ST+I+ C G++ EA L +E +I P++ TY L+ +C+ ++ EA L M
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++GV+PNV +YN L+ G+C IG + ++ M+ KG PN S++++I+ L +S
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS 303
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N + N TY ++ L + ++LL + + +K + T++ Y L G +
Sbjct: 215 NINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG-VKPNVVSYNTLMDGYCLIGEVQN 273
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + F + + V +V S N +++ L ++KR D + + HK +VPN T + LI
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK-NMVPNTVTYSSLI 332
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK + A+ +L EM G ++VT+T++L +++ A +F + +RG
Sbjct: 333 DGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TYT L+DG K GR +A K+ + G N TY VMI CK EA +
Sbjct: 393 PNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAM 452
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
M + +P + +I L E+ + + A +L ++ K+ +
Sbjct: 453 KSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI-WEAKKLFDEFER 388
K++ L + A L+K++ K PD + +I+ C G++ + L +
Sbjct: 15 KIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKL 74
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P+ +T NTL+ G+C E+ ++ D +V +G + + +Y L+ G CKIG +
Sbjct: 75 GYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSA 134
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG------SVESDSWN 502
+++L + D+ PN ++ +I+GL + E + S A G + + +
Sbjct: 135 LKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYG 194
Query: 503 FLLTRIVSDLDSGAGALDELLVKN 526
F L L G L+E+++KN
Sbjct: 195 FCLA---GQLMEAFGLLNEMILKN 215
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%)
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P ++ +N ++ + + A L+ M KG+EP++FT N+LI FC +G +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESG 478
L ++L G PN + + L++GL G
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKG 94
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 225/431 (52%), Gaps = 18/431 (4%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+H II L RA + +L ++ + ++ E
Sbjct: 23 KNXEHALQFFRWVERSNL-FEHNRETHHKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+L++ +I +YG AG + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 81 DLWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
P T NI+I VE A R ++M S ++P++VT+ T++ GY
Sbjct: 140 KMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ R P TYT L+ GY+ + R+ DA+++++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+++ P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIA 402
+ + +I CK G+ +A KL D I PS YN LI
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRPQSTLHLEPS--AYNPLIE 377
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+C + + +A L +++ GV+ + N LI+G + G+ +L+ ML +
Sbjct: 378 YLCNNGQTAKAESLVRQLMKLGVQ-DPTALNALIRGHSQEGSPDSAFELLKIMLRRKARS 436
Query: 463 NKTSFSLLIEG 473
K+++ L++
Sbjct: 437 EKSAYDSLVQS 447
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 137/312 (43%), Gaps = 44/312 (14%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N TH I+ + +A+ + D+ +G D + +L+D Y K G + ++VK+
Sbjct: 44 NRETHHKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLLIDSYGKAGIVQESVKLF 103
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME+ GVE +Y + + + + M+ ++Y
Sbjct: 104 QKMEELGVERTIKSYDALFKVILRRGRY---------MMAKRY----------------- 137
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTY 397
+ ++L + P + +I GK+ A + F++ + R +P ++TY
Sbjct: 138 ---------FNKMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTY 188
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I G ++ EA + + +M + +EP V TY LI+G+ + + +R++EEM
Sbjct: 189 NTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKG 248
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------D 511
G PN ++S L+ GL + E ++ +D+ FL R++S D
Sbjct: 249 FGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFL--RLISGQCKAGD 306
Query: 512 LDSGAGALDELL 523
LD+ A L ++
Sbjct: 307 LDAAADVLKAMI 318
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++ L A+ S+L E+ + ++F+ +I AG + A
Sbjct: 254 NAITYSTLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADV 313
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD-----LVHLMFKN----SRHKFKVVPNVFT 187
+ + +V L+ + +YD L L+ K+ + + P+ +
Sbjct: 314 LKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRPQSTLHLEPSAY- 372
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI+ LC A ++ ++ +G V + ++ G+ G ++A + +L
Sbjct: 373 -NPLIEYLCNNGQTAKAESLVRQLMKLG-VQDPTALNALIRGHSQEGSPDSAFELLKIML 430
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R + + Y L+ Y+K DA +D M +NG P+ + ++E+
Sbjct: 431 RRKARSEKSAYDSLVQSYLKKSEPADAKAALDSMIENGHLPDPALFRSVMESL 483
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 201/400 (50%), Gaps = 11/400 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + HP+++H+ ++ + AR R F++ +L+ ++ + L I
Sbjct: 86 ALQFFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAIL 145
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
R Y G+P AV+TFL + + +++ + S NTLL+ L ++KR + H + K +F
Sbjct: 146 AER-YASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRF 204
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P+ T NIL C A+RVL EM G+ P +VT+ T+L GY I+ A
Sbjct: 205 R--PDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEA 262
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ R D TYT ++ G+ G + A +V EM GV PN TY +I+
Sbjct: 263 WEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQV 322
Query: 300 FCKGKKSGEARNLLDDMLQRKY-VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
CK A + ++M + VP+ VI LC G +E A +R+
Sbjct: 323 LCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRA 382
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMC---ESAELTEAG 414
+ +I + C G++ +A ++F + GS +P+L TYN LI+ M +S +L AG
Sbjct: 383 CVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAG 442
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGN---AKEGIRI 451
+L DMV++G P FT+N ++ G GN AKE +R+
Sbjct: 443 KLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEILRM 482
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 157/327 (48%), Gaps = 6/327 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ F + I A + D A ++ M S+ + P+ T + Y G A R
Sbjct: 104 PSSFDHAVDIAA--RMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRT 161
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F + + G D ++ L+D K R+ A ++ + P+ VTY ++ +C
Sbjct: 162 FLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCL 220
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K++ A +L +M+QR P+ ++ ++++A E + + ++ C D
Sbjct: 221 IKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVT 280
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+IH G + +AK++F E + G +P++ TYN LI +C+ + A ++++M
Sbjct: 281 YTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMA 340
Query: 422 EKGV-EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+GV PNV TYN++I+G C +G+ + + +E M + G +++++I ++G
Sbjct: 341 REGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEV 400
Query: 481 GEVGKVV-SMATASGSVESDSWNFLLT 506
+ +V M S D++N L++
Sbjct: 401 EKALEVFGKMGDGSCLPNLDTYNVLIS 427
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 2/232 (0%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ + V I A + S A L+ M + PS + + GK A
Sbjct: 104 PSSFDHAVDIAARMRDFNSAWA--LVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRT 161
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCES 407
+ + D +T++ LCK ++ A L P +TYN L G C
Sbjct: 162 FLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLI 221
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
A R+ +MV++G+EP + TYN +++G+ + KE EM + C + ++
Sbjct: 222 KRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTY 281
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGAL 519
+ +I G +G+ + +V G V + + L +++ DS A+
Sbjct: 282 TTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAV 333
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 236/467 (50%), Gaps = 20/467 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG--ENLF 117
ALQ + + + F+H +T I+ L R + +L + + E+ F
Sbjct: 102 ALQFYRWVERAGL-FTHTPETTLKIVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAF 160
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+++I +YG AG + +VK F ++++ + R+V+S + L +++ RY ++ + N+
Sbjct: 161 VSLIDSYGRAGIVQESVKLFKKMKELGLDRTVKSYDALFKVILRRGRY-MMAKRYYNAML 219
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
V P T NIL+ + ++ A+R ++M S G++P++VT+ T++ GY ++
Sbjct: 220 LEGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVD 279
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+++F ++ R VP+ ++T ++ GY+ GR+ DA+KV +EM+ GV+PN VT+ ++
Sbjct: 280 EAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLL 339
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
C +K EAR++L +M++R P +AL K++ C+ G ++ A ++ K ++R +
Sbjct: 340 PGLCDAEKMAEARDVLGEMVERYIAPKDNALFMKMMSCQCKAGDLDAAADVLKAMVRLSI 399
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMC 405
+ +I CK +A+KL D+ I PS YN +I +C
Sbjct: 400 PTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSEMEPS--AYNLMIGYLC 457
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
E +A + +++KGV+ +V +N LI+G K GN I++ M +G +
Sbjct: 458 EHGRTGKAETFFRQLLKKGVQDSV-AFNNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVD 516
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSD 511
S+ LLIE G + + SG + ES + ++ + D
Sbjct: 517 SYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDD 563
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 193/445 (43%), Gaps = 51/445 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I+ R + D E L E+K +I F T+++ Y AGR + A+K F
Sbjct: 264 TYNTLINGYFRFKKVDEAEKLFVEMK-GRDIVPNVISFTTMLKGYVAAGRIDDALKVFEE 322
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN-------VFTCN--- 189
++ V+ +V + +TLL L ++ + ++ + P + +C
Sbjct: 323 MKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERY-IAPKDNALFMKMMSCQCKA 381
Query: 190 --------------------------ILIKALCKKDDVEGAIRVLDEM--------PSMG 215
+LI++ CK + + A ++LD++ P
Sbjct: 382 GDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQND 441
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ ++G G A+ F +L +G V D+ + L+ G+ K G A
Sbjct: 442 SEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKG-VQDSVAFNNLIRGHSKEGNPDSAF 500
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++M M GV + +Y ++IE++ + + +A+ LD ML+ ++P S+L V++ L
Sbjct: 501 EIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESL 560
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
++G+V+ A + K ++ K + + I+ L G + EA D G P
Sbjct: 561 FDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEALGRIDLLMHNGCEPD- 619
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
++ L++ +CE + A +L D ++E+ + Y+ ++ G IL +
Sbjct: 620 --FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAYSILCK 677
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGN 479
+L+KG + +S LI+ L + GN
Sbjct: 678 ILEKGGSTDWSSRDELIKSLNQEGN 702
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 144/317 (45%), Gaps = 28/317 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTEL---------KQNPEIK-CGENLFITVIRNYGLAGRP 130
Y +I +A +D E LL +L + + E++ NL I + +G G+
Sbjct: 406 YGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKA 465
Query: 131 ELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNV 185
E TF R + K VQ SV + N L+ + + ++++ +M + V +V
Sbjct: 466 E----TFFRQLLKKGVQDSV-AFNNLIRGHSKEGNPDSAFEIMKIMGRRG-----VARDV 515
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+ +LI++ +K + A LD M G +P + +++ G ++ A RV
Sbjct: 516 DSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKS 575
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++++G + +++ + G + +A+ +D + NG EP+ + ++ C+ +K
Sbjct: 576 MVEKGAKENMDLVLKILEALLLRGHVEEALGRIDLLMHNGCEPD---FDHLLSVLCEKEK 632
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ A LLD +L+R + ++ KV+D L GK +A + ++L K D +
Sbjct: 633 TIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAYSILCKILEKGGSTDWSSRDE 692
Query: 366 IIHWLCKEGKIWEAKKL 382
+I L +EG +A L
Sbjct: 693 LIKSLNQEGNTKQADVL 709
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K V + N LI+ K+ + + A ++ M G+ ++ ++ ++ Y+ +G+ +A
Sbjct: 475 KGVQDSVAFNNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADA 534
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
K +L+ G +P+++ Y +M+ GR+ A +VM M + G + N ++EA
Sbjct: 535 KTALDGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGAKENMDLVLKILEA 594
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
EA +D ++ P ++ +LCE+ K A +L +L ++C+ D
Sbjct: 595 LLLRGHVEEALGRIDLLMHNGCEPDFD---HLLSVLCEKEKTIAALKLLDFVLERDCIID 651
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEA 413
+I ++ L GK A + + E+G + + LI + + +A
Sbjct: 652 FSIYDKVLDALLAAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQA 706
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 224/447 (50%), Gaps = 10/447 (2%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGEN 115
+D AL I H A F +Y++++ R+ R E++ E+ E + N
Sbjct: 150 IDKALSIVHLAQAH--GFMPGVLSYNAVLDATIRSKRNISFAENVFKEM---LESQVSPN 204
Query: 116 LFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+F +IR + AG ++A+ F ++E +V + NTL++ + ++ D + +
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 264
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ K + PN+ + N++I LC++ ++ VL EM G + VT+ T++ GY
Sbjct: 265 SMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G+ A + ++L G P TYT L+ K G + A++ +D+M G+ PNE TY
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+++ F + EA +L +M + PS +I+ C GK+EDA + + +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
K PD ST++ C+ + EA ++ E E+G P +TY++LI G CE E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A L+++M+ G+ P+ FTY LI +C G+ ++ +++ EM++KG P+ ++S+LI
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 473 GLYESGNEGEVGKVVSMATASGSVESD 499
GL + E +++ SV SD
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSD 590
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 196/364 (53%), Gaps = 3/364 (0%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFK 173
++F V+++Y + A+ + V S N +L+A +++KR +FK
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+V PNVFT NILI+ C +++ A+ + D+M + G +PN+VT+ T++ GY
Sbjct: 195 EMLES-QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
I++ ++ + +G P+ +Y V+++G + GR+ + V+ EM G +EVTY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I+ +CK +A + +ML+ PS +I +C+ G + A E ++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ P+ +T++ ++G + EA ++ E + G PS++TYN LI G C + ++ +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A + +DM EKG+ P+V +Y+ ++ GFC+ + E +R+ EM++KG P+ ++S LI+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 473 GLYE 476
G E
Sbjct: 494 GFCE 497
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 215/427 (50%), Gaps = 18/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+ +I+ L R V +LTE+ + E + T+I+ Y G A+
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + SV + +L++++ + + R + + PN T L+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFS 391
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+K + A RVL EM G P++VT+ ++ G+ G +E+A V D+ ++G PD
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y+ ++ G+ + + +A++V EM + G++P+ +TY +I+ FC+ +++ EA +L ++M
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L+ P +I+ C EG +E A +L ++ K +PD S +I+ L K+ +
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLI---------------AGMCESAELTEAGRLWDDM 420
EAK+L + F S+PS +TY+TLI G C +TEA ++++ M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ K +P+ YN++I G C+ G+ ++ + +EM+ G + + L++ L++ G
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 481 GEVGKVV 487
E+ V+
Sbjct: 692 NELNSVI 698
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ +F E + P++ TYN LI G C + + A L+D M KG PNV TYN LI
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SV 496
G+CK+ +G ++L M KG PN S++++I GL G EV V++ G S+
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 497 ESDSWNFLL 505
+ ++N L+
Sbjct: 309 DEVTYNTLI 317
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 147/329 (44%), Gaps = 39/329 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRP 130
FS + TY+++I+ + ++L ++K+ +P++ + R+Y
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD----- 465
Query: 131 ELAVKTFLRIEKFNVQRSVR----SLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVV 182
V LR+++ V++ ++ + ++L+ + +R DL M + +
Sbjct: 466 ---VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-----VGLP 517
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ FT LI A C + D+E A+++ +EM G++P++VT++ ++ G + AKR+
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 243 FGDILDRGWVPDATTYTVLMD---------------GYIKLGRLTDAVKVMDEMEDNGVE 287
+ VP TY L++ G+ G +T+A +V + M +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ Y +MI C+ +A L +M++ ++ + ++ L +EGKV + +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+LR + + + ++ +EG +
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNM 726
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL------------- 227
V+P+V T ++LI L K+ A R+L ++ VP+ VT+ T++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 228 --GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
G+ +G + A +VF +L + PD T Y +++ G+ + G + A + EM +G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ VT +++A K K E +++ +L+ + + ++++ EG ++
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 346 ELWKRLLRKNCMPDNAIS 363
++ + + +P N IS
Sbjct: 731 DVLAEMAKDGFLP-NGIS 747
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 222/442 (50%), Gaps = 5/442 (1%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
+ L P + +++ Q + +AL F++A + +SH+ Y++++ L++ +
Sbjct: 163 RSLKPPLVCAVLRSQADERVALNFFYWADR-QWRYSHHPVVYYTMLDVLSKTKLCQGARR 221
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
+L L I+C F V+ +Y AG+ A++ ++K V+ S+ NT + L
Sbjct: 222 VL-RLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVL 280
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ + + L F + P++ T N LIK C + +E A+ ++ +PS G P+
Sbjct: 281 VKGGKLEKA-LKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPD 339
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDIL-DRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
V++ T++G IE K + ++ + +PD TY L+ K G DA+ +
Sbjct: 340 KVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFL 399
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
E +D G ++V Y ++ +FC+ + EA++L+ DM R P ++D C
Sbjct: 400 KEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRL 459
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTY 397
G++++A ++ +++ + C P+ + +++ LC GK EA+++ + E P+ +TY
Sbjct: 460 GRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITY 519
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
++ G+ +L+EA L +MVEKG P N+LIQ C+ E + LEE L+
Sbjct: 520 GAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLN 579
Query: 458 KGCFPNKTSFSLLIEGLYESGN 479
KGC N +F+ +I G + G+
Sbjct: 580 KGCAINVVNFTTVIHGFCQIGD 601
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 165/329 (50%), Gaps = 1/329 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S T++ L + K+ + V + + ++P+ T N LI L K + A+ L E
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 401
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
G + V ++ I+ + +G ++ AK + D+ RG PD TYT ++DG+ +LGR
Sbjct: 402 AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGR 461
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A K++ +M +G +PN V+Y ++ C KS EAR +++ + + P++
Sbjct: 462 IDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGA 521
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
V+ L EGK+ +AC+L + ++ K P + +I LC+ K+ EAKK +E +G
Sbjct: 522 VMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 581
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+++ + T+I G C+ ++ A + DDM G P+ TY L K G E
Sbjct: 582 CAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAA 641
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ +ML KG P ++ +I + G
Sbjct: 642 ELIVKMLSKGLDPTPVTYRSVIHRYSQWG 670
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 2/302 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ L K +GA RVL M G+ ++ Y G + NA RV + G
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAG 265
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P + + +K G+L A+K ++ M+ G++P+ VTY +I+ +C + +A
Sbjct: 266 VEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 325
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA-CELWKRLLRKNCMPDNAISSTIIHW 369
L+ + + P V+ LC+E K+E+ C + K + N +PD +T+IH
Sbjct: 326 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHM 385
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
L K G +A E + +G + Y+ ++ C+ + EA L DM +G P+
Sbjct: 386 LSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPD 445
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
V TY ++ GFC++G E +IL++M GC PN S++ L+ GL SG E ++++
Sbjct: 446 VVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 505
Query: 489 MA 490
++
Sbjct: 506 VS 507
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 181/427 (42%), Gaps = 48/427 (11%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P ++ L+ M+ + + D AL A F + Y +I+H + D +
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQD--KGFHIDKVGYSAIVHSFCQKGRMDEAK 431
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
SL+ ++ NP++ + ++ + GR + A K ++ K + + S L
Sbjct: 432 SLVIDMYSRGCNPDVVT----YTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTAL 487
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT---------------------------- 187
LN L + + M S + PN T
Sbjct: 488 LNGLCHSGKSLEAREMINVSEEHW-WTPNAITYGAVMHGLRREGKLSEACDLTREMVEKG 546
Query: 188 -------CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
N+LI++LC+ V A + L+E + G N+V TT++ G+ GD+E A
Sbjct: 547 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 606
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V D+ G PDA TYT L D K GRL +A +++ +M G++P VTY +I +
Sbjct: 607 SVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRY 666
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ + + NLL+ ML+R+ P + +VI+ LC+ G +E+A +L ++LR D
Sbjct: 667 SQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDA 724
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++ K+G A K+ F R P L + + +L EA L
Sbjct: 725 NTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLR 784
Query: 420 MVEKGVE 426
VE+G++
Sbjct: 785 FVERGIQ 791
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 190/445 (42%), Gaps = 51/445 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++++ L + + + V+ L+ ++ N + + + T+I G + A+
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 401
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++++ Q R D LV M+ + P+V T ++
Sbjct: 402 AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCN-----PDVVTYTAIVDGF 456
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ ++ A ++L +M G PN V++T +L G G A+ + + W P+A
Sbjct: 457 CRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 516
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR----- 310
TY +M G + G+L++A + EM + G P V ++I++ C+ +K EA+
Sbjct: 517 ITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 576
Query: 311 ------------------------------NLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
++LDDM P + + D L ++G+
Sbjct: 577 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGR 636
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTL 400
+++A EL ++L K P ++IH + G++ + L ++ + P YN +
Sbjct: 637 LDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ-PFRTVYNQV 695
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ L EA +L ++ + + T ++L++ + K G A ++ M +
Sbjct: 696 IEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNL 755
Query: 461 FPN-----KTSFSLLIEG-LYESGN 479
P+ K S L+++G L E+ N
Sbjct: 756 TPDLKLCEKVSKKLVLDGKLVEADN 780
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 217/399 (54%), Gaps = 7/399 (1%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
Q+ D AL +F+ + F H+Y +Y ++++KLAR+R F+AVE+LL L QN I+C E
Sbjct: 392 QDPDDALSLFNQYQQM--GFKHDYPSYSALVYKLARSRNFEAVETLLDYL-QNINIRCRE 448
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFK 173
LFI +I++YG + PE A++ F R+ FN R++ S NTLLN LV+ R+ D + + +
Sbjct: 449 TLFIALIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDR 508
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+++ F+ N + NI+IK K + + A +V +EM + P +VT +++G +
Sbjct: 509 STKMGFR--RNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGK 566
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
GD++ A + D++ + P+A TY +LM+G LG+ +A K+M +M+ G +P + +
Sbjct: 567 GDLDGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNF 626
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
GV++ + + + + LL +M +R++ P +I+ LC+EG+ +A ++ +
Sbjct: 627 GVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQV 686
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTE 412
C P+ A ++ C+ K+ G P L ++ L+ G+ ++ ++
Sbjct: 687 GGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDG 746
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
A + ++M ++ + ++ + L++ C G+ +
Sbjct: 747 ACFVLEEMEKRKMRFHLEAWEALVKDACPGDRGAGGLDV 785
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 189/395 (47%), Gaps = 8/395 (2%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTC 188
P+ A+ F + ++ + S + L+ L +++ ++ V + ++ + +F
Sbjct: 394 PDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIA 453
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K E AI + MPS +V+ T+L V +A +F
Sbjct: 454 --LIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRSTK 511
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC-KGKKSG 307
G+ ++ ++ +++ G++ G A +V +EM D V+P VT+ +I C KG G
Sbjct: 512 MGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDG 571
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL+DM+Q+++ P++ +++ LC GK ++A ++ + + C P ++
Sbjct: 572 -AMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLM 630
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + G+I + K L E +R P ++TYN LI +C+ EA ++ +M G E
Sbjct: 631 SDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCE 690
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGK 485
PN TY M++ GFC++ + + G+++L ML G P SF L+ GL ++G +G
Sbjct: 691 PNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFV 750
Query: 486 VVSMATASGSVESDSWNFLLTRIVSDLDSGAGALD 520
+ M ++W L+ D GAG LD
Sbjct: 751 LEEMEKRKMRFHLEAWEALVKDACPG-DRGAGGLD 784
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 221/452 (48%), Gaps = 13/452 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+IH L +A D LL E++ I G + VI+ AGR A+
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG-IPPGVAVHNGVIKGLCKAGRFGDALGY 87
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + N L++ALV++ R + +F++ + +PNV T +I LC
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ AI +LD M G PN++T++ ++ G G + + ++ RG+ PD
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++G K RL +A++++ M +G P VTY ++E FC+ K+ A L+ M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+R P VI LC + +++DA L K+++ C+PD STII LCK+ ++
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 377 ---WEAKKLFDEFE----RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
W+ + + E G P+ TY +I G+C + + +A L M++ V P++
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+++M+I CK + +I M ++ C PN +++ LI+GL + G + +V +
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 490 ATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
S ++N +L D G G ++E
Sbjct: 448 MVESFRPGVATYNSVL-----DGLCGVGRIEE 474
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 5 LHQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIF 64
+H + C G A T+ T K P + LV + + ++ A QIF
Sbjct: 67 VHNGVIKGLCKAGRFGDALGYFKTVAGT---KCTPDIITFNILVDALVKSGRVEEAFQIF 123
Query: 65 ---HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
H + + PN TY ++I+ L + D LL + E C N+ +
Sbjct: 124 ESMHTSSQCLPNVV----TYTTVINGLCKDGKLDRAIELLDLMN---ETGCCPNVITYSV 176
Query: 122 RNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNS 175
GL AGR + + + Q V NTLLN L +++R D LV LM ++
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ P V T N L++ C+ V+ A R++ M G P+++ + T++ G
Sbjct: 237 CY-----PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR------LTDAVKVMDEMEDNGVEPN 289
+++A+ + ++ VPD TY+ ++DG K R L A ++++ M+ G PN
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
TY V+IE C+ +KS +A LL M+ + VP + VI LC+ ++ A +++
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFG 411
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAE 409
+ + C P+ + +I L K G++ +A ++F+ P + TYN+++ G+C
Sbjct: 412 MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGR 471
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ EA R+ + M+ K P+ +Y LI+G C++ +E + + + KG
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 47/366 (12%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+N LN LV+ ++ +F+ R VPN FT LI LCK ++ A +LDEM
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREER----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ P + H ++ G G +A F + PD T+ +L+D +K GR+
Sbjct: 57 RDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 272 TD------------------------------------AVKVMDEMEDNGVEPNEVTYGV 295
+ A++++D M + G PN +TY V
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++E CK ++ + LL +M +R + P + +++ LC+ ++++A EL + ++R
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C P ++++ C+ ++ A +L ERG P ++ YNT+IAG+C A L +A
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA------KEGIRILEEMLDKGCFPNKTSFS 468
L MV P+V TY+ +I G CK + ILE M GC PN +++
Sbjct: 297 ALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356
Query: 469 LLIEGL 474
++IEGL
Sbjct: 357 VVIEGL 362
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 5/231 (2%)
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
++ G+ AV++ E PNE TYG +I CK K +A LLD+M R P
Sbjct: 9 VRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGV 65
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
A+ VI LC+ G+ DA +K + C PD + ++ L K G++ EA ++F+
Sbjct: 66 AVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFES 125
Query: 386 FERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
S +P+++TY T+I G+C+ +L A L D M E G PNV TY++L++G CK G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G +L+EM +G P+ ++ L+ GL +S E ++V + SG
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 158/352 (44%), Gaps = 21/352 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ + + + LD AL++ TY+S++ R++ D
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLM--IRSGCYPTVVTYNSLMELFCRSKQVDRAF 261
Query: 99 SLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L+ + E C ++ + TVI R + A ++ V + +T++
Sbjct: 262 RLIQVMS---ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Query: 157 NALVQNKRYDL---------VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+ L ++ R D + M K + PN T ++I+ LC+ + A+ +
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQT----GCPPNAGTYAVVIEGLCRARKSQQALAL 374
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L M +VP+L + + ++G D++ A ++FG + +R P+ Y L+DG K
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G + AV+V + M ++ P TY +++ C + EA +++ M+ ++ P A
Sbjct: 435 GGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+I LC VE+A EL++ + K + + + +++ LCK+ ++ +A
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 149/321 (46%), Gaps = 11/321 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFH-YAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
+P + L+ + R + +D A ++ + + P NY+T +I L R D
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT---VIAGLCRDARLDD 294
Query: 97 VESLLTEL---KQNPEIKCGENLFITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVRS 151
++LL ++ + P++ + + +++ + + E A + +++ + +
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
++ L + ++ + + +VVP++ + +++I +LCK D++ A ++ M
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDS-EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
PN V + ++ G G+++ A RVF +++ + P TY ++DG +GR+
Sbjct: 414 SERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRI 472
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+AV++++ M P+ +YG +I C+ EA L + + + + +
Sbjct: 473 EEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVL 532
Query: 332 IDLLCEEGKVEDACELWKRLL 352
++ LC++ ++ DA + +L+
Sbjct: 533 VNELCKKKRLSDAHGVANKLI 553
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
++ L + G+ +A +LF E ER +P+ TY +LI G+C++ +L +A L D+M ++G+
Sbjct: 5 LNLLVRAGQHGQAVQLFRE-ER-CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P V +N +I+G CK G + + + + C P+ +F++L++ L +SG E ++
Sbjct: 63 PGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 487 V-SMATAS 493
SM T+S
Sbjct: 123 FESMHTSS 130
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 80 TYHSIIHKLARARAFDA---VESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
TY +II L + DA +E+ L+ + C N + VI A + + A+
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL 372
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
R+ V + S + ++ +L ++ D + +F + + PN LI
Sbjct: 373 ALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER-ECKPNPVAYAALIDG 431
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L K +V+ A+RV + M P + T+ ++L G G IE A R+ ++ + PD
Sbjct: 432 LSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+Y L+ G ++ + +A ++ +E G Y V++ CK K+ +A + +
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550
Query: 315 DMLQRKY 321
+++ Y
Sbjct: 551 KLIEAGY 557
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 228/496 (45%), Gaps = 33/496 (6%)
Query: 22 ARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTY 81
+ C+L + + P P RL RL+ NLD + KFH ++
Sbjct: 111 SYCTLILLLIRSKFIP-PARLLLIRLIDGNLPVLNLD--------SEKFHIEIANALFGL 161
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR-- 139
S++ + +AFD + + + +N C ++F + R P L FL
Sbjct: 162 TSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARK---GTFPSLKTCNFLLSS 218
Query: 140 ----------IEKFNVQRS-----VRSLNTLLNALVQN-KRYDLVHLMFKNSRHKFKVVP 183
E F V V S ++NAL + K + + L K K + P
Sbjct: 219 LVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMK--MEKLGISP 276
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
NV T N +I LC+ ++ A + ++M G+ PNL T+ ++ G + + V
Sbjct: 277 NVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVL 336
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+++ G+ P+ + L+DGY K+G + A+K+ D M + P VT +++ FCK
Sbjct: 337 DEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKS 396
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ A N L+++L C V+ LC++ + A K +L +N P + +
Sbjct: 397 DQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 456
Query: 364 STIIHWLCKEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ ++ LCK+GK EA +L F E+GS S +T N LI G+C + +L EA R+ +M+E
Sbjct: 457 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE 516
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G+ + TYN LI GFC G + R+ EEM +G P+ +++ L+ GL G +
Sbjct: 517 RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDD 576
Query: 483 VGKVVSMATASGSVES 498
K+ ASG + +
Sbjct: 577 AIKLWDEFKASGLISN 592
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 214/438 (48%), Gaps = 26/438 (5%)
Query: 55 QNLDLALQIFHYAGKF-HPNFSHNYDTYHSIIHKLARARAFDAVES---LLTEL-KQNPE 109
Q DL + + Y+ +F + FS D ++ LAR F ++++ LL+ L K N
Sbjct: 172 QAFDLLIHV--YSTQFRNLGFSCAVDVFY----LLARKGTFPSLKTCNFLLSSLVKANEF 225
Query: 110 IKCGENL-------------FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
KC E F VI G+ E A++ F+++EK + +V + N ++
Sbjct: 226 EKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCII 285
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
N L QN R D + + K V PN+ T LI L K + + VLDEM G
Sbjct: 286 NGLCQNGRLDNAFELKEKMTVK-GVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGF 344
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+V ++ GY G+IE A ++ ++ + P + T LM G+ K ++ A
Sbjct: 345 NPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAEN 404
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
++E+ +G+ + ++ CK + A ML R + PS L ++ LC
Sbjct: 405 ALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLC 464
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLL 395
++GK +A ELW RLL K S+ +IH LC GK+ EA ++ E ERG +
Sbjct: 465 KDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRI 524
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TYN LI G C ++ RL ++M ++G++P+++TYN L++G C +G + I++ +E
Sbjct: 525 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 584
Query: 456 LDKGCFPNKTSFSLLIEG 473
G N ++ +++EG
Sbjct: 585 KASGLISNIHTYGIMMEG 602
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 196/375 (52%), Gaps = 9/375 (2%)
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-----PNVFTCNILI 192
R K + R+ R + LL LV D HL + + F+++ + T N LI
Sbjct: 438 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHL--EATELWFRLLEKGSPASKVTSNALI 495
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC + A R++ EM G+ + +T+ ++ G+ G +E R+ ++ RG
Sbjct: 496 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQ 555
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L+ G +G+L DA+K+ DE + +G+ N TYG+M+E +CK + + NL
Sbjct: 556 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 615
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+++L +K +S + +I C+ G V A +L + + K +P+ A S++IH +C
Sbjct: 616 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCN 675
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + +AK L DE + G +P+++ Y LI G C+ ++ A W +M+ + PN FT
Sbjct: 676 IGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFT 735
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMA 490
Y ++I G+CK+GN ++ +L +M + G P+ ++++L G ++ + KV MA
Sbjct: 736 YTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMA 795
Query: 491 TASGSVESDSWNFLL 505
T V+ ++ L+
Sbjct: 796 TEGLPVDEITYTTLV 810
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 140/260 (53%), Gaps = 1/260 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+++T N L++ LC ++ AI++ DE + G++ N+ T+ ++ GY IE+ +
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++L + ++ Y +++ + + G + A+++++ M+ G+ PN TY +I
Sbjct: 614 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 673
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C +A++L+D+M + +VP+ +I C+ G+++ A W ++ N P+
Sbjct: 674 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 733
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I CK G + +A L + E G +P ++TYN L G C++ ++ A ++ D
Sbjct: 734 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 793
Query: 420 MVEKGVEPNVFTYNMLIQGF 439
M +G+ + TY L+ G+
Sbjct: 794 MATEGLPVDEITYTTLVHGW 813
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 1/249 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++R G+ + A+K + + + ++ + ++ + R + V +F K
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK- 622
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K+ N NI+IKA C+ +V A+++L+ M S G++PN T+++++ G G +E+A
Sbjct: 623 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 682
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
K + ++ G+VP+ YT L+ GY KLG++ A EM + PN+ TY VMI+
Sbjct: 683 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 742
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+CK +A NLL M + VP + + C+ +++A ++ ++ + D
Sbjct: 743 YCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVD 802
Query: 360 NAISSTIIH 368
+T++H
Sbjct: 803 EITYTTLVH 811
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 111/233 (47%), Gaps = 4/233 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++ +A + VE+L EL + +++ ++ +I+ + G A++
Sbjct: 592 NIHTYGIMMEGYCKANRIEDVENLFNEL-LSKKMELNSIVYNIIIKAHCQNGNVAAALQL 650
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ + + + ++L++ + D HL+ + + F VPNV LI
Sbjct: 651 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGF--VPNVVCYTALIGGY 708
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++ A EM S + PN T+T ++ GY G++E A + + + G VPD
Sbjct: 709 CKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDV 768
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
TY VL +G+ K + +A KV D+M G+ +E+TY ++ + +G+
Sbjct: 769 VTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWNPPTITGQ 821
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 199/403 (49%), Gaps = 51/403 (12%)
Query: 149 VRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V S T++N + K Y H M ++ P+V T + +I ALCK ++ A
Sbjct: 196 VVSYTTVINGFFKEGDSGKAYSTYHEMLDR-----RISPDVVTYSSIIAALCKGQAMDKA 250
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA----KRVFGDILD-RGWVPDATTYT 259
+ VL M G++PN T+T+I+ GY G + A K+V D ++ G PD TY
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ GY G L ++D M NG+ P+ Y ++I A+ K K EA + M Q+
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC-------- 371
P + VI +LC+ G+VEDA +++++ + P N + +++IH LC
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 430
Query: 372 ---------------------------KEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
KEG++ E++KLFD R G P ++TY+TLI G
Sbjct: 431 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + ++ EA +L MV G++PN TY LI G+CKI + + + +EM G P+
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLL 505
+++++++GL+++ ++ T SG+ +E ++N +L
Sbjct: 551 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 593
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 233/496 (46%), Gaps = 26/496 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ F++ + A +H S + TY SII L + +A D
Sbjct: 194 PDVVSYTTVINGFFKEGDSGKAYSTYHEM--LDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 99 SLLTELKQNPEI-KCGENLFITVIRNYGLAGRPELAVKTFLR------IEKFNVQRSVRS 151
+LT + +N + C + +++ Y +G+P+ A+ FL+ +E ++ + +
Sbjct: 252 EVLTSMVKNGVMPNC--RTYTSIMHGYCSSGQPKEAIG-FLKKVRSDGVEPDGLEPDIAT 308
Query: 152 LNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
TLL + L+ LM +N H P+ + NILI A K+ V+ A+ V
Sbjct: 309 YCTLLQGYATKGALVGMHALLDLMVRNGIH-----PDHYVYNILICAYAKQGKVDEAMLV 363
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
+M G+ P+ VT+ ++G G +E+A F ++D G P Y L+ G
Sbjct: 364 FSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 423
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ A +++ EM D G+ N + + +I++ CK + E+ L D M++ P
Sbjct: 424 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 483
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ID C GK+++A +L ++ P+ T+I+ CK ++ +A LF E E
Sbjct: 484 YSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEME 543
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ P ++TYN ++ G+ ++ A L+ + E G + + TYN+++ G CK
Sbjct: 544 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 603
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
+ +R+ + + +F+++I+ L + G GE K + +A +S + + W +
Sbjct: 604 DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGE-AKDLFVAFSSNGLVPNYWTY--- 659
Query: 507 RIVSDLDSGAGALDEL 522
R++++ G G L+EL
Sbjct: 660 RLMAENIIGQGLLEEL 675
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 16/359 (4%)
Query: 130 PELAVKTFLRIEKFN---VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNV 185
P AV + R+ + V +V + L+ + R DL N K F+V
Sbjct: 65 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAIT 124
Query: 186 FTCNILIKALCKKDDVEGAIR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA---KR 241
FT L+K LC A+ VL M + +P++ + T +L G + A
Sbjct: 125 FT--PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPH 182
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D G PD +YT +++G+ K G A EM D + P+ VTY +I A C
Sbjct: 183 MMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALC 242
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN- 360
KG+ +A +L M++ +P+ ++ C G+ ++A K++ PD
Sbjct: 243 KGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGL 302
Query: 361 ----AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
A T++ +G + L D R I P YN LI + ++ EA
Sbjct: 303 EPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAML 362
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ M ++G+ P+ TY +I CK G ++ + E+M+D+G P ++ LI GL
Sbjct: 363 VFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 421
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 182/411 (44%), Gaps = 3/411 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ A A + +LL + +N I ++ +I Y G+ + A+ F +
Sbjct: 308 TYCTLLQGYATKGALVGMHALLDLMVRNG-IHPDHYVYNILICAYAKQGKVDEAMLVFSK 366
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + ++ L ++ R + L F+ + + P N LI LC +
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE-GLSPGNIVYNSLIHGLCTCN 425
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
E A ++ EM G+ N + +I+ + G + ++++F ++ G PD TY+
Sbjct: 426 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 485
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY G++ +A+K++ M G++PN VTY +I +CK + G+A L +M
Sbjct: 486 TLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESS 545
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ L + + A EL+ R+ + + + I+H LCK +A
Sbjct: 546 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 605
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++F + T+N +I + + EA L+ G+ PN +TY ++ +
Sbjct: 606 LRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAEN 665
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G +E ++ M D GC + + ++ L + G G +SM
Sbjct: 666 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 716
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 143/300 (47%), Gaps = 2/300 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I + CK+ V + ++ D M +G+ P+++T++T++ GY G ++ A ++
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G P+ TY L++GY K+ R+ DA+ + EME +GV P+ +TY ++++ +
Sbjct: 505 SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+++ A+ L + + + ++ LC+ +DA +++ L + +
Sbjct: 565 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 624
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I L K G+ EAK LF F G +P+ TY + + L E +L+ M +
Sbjct: 625 NIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 684
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G + N +++ + G L M+D+ F + S + L L G E
Sbjct: 685 NGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQE 743
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 13/257 (5%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV-----MDEMEDNGVEPNEV 291
E+A+ VF ++L RG A+ Y L + R + A V M V P
Sbjct: 32 EDARHVFDELLRRGR--GASIYG-LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVH 88
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL-WKR 350
TY ++I C+ + L +++++ + + ++ LC + + DA ++ +R
Sbjct: 89 TYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL----FDEFERGSIPSLLTYNTLIAGMCE 406
+ +CMPD + ++ LC E + EA +L D GS P +++Y T+I G +
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFK 208
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A + +M+++ + P+V TY+ +I CK + + +L M+ G PN +
Sbjct: 209 EGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRT 268
Query: 467 FSLLIEGLYESGNEGEV 483
++ ++ G SG E
Sbjct: 269 YTSIMHGYCSSGQPKEA 285
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFT 187
R A + ++RI + Q + + N +L+ L +NK D MF+N K+ F
Sbjct: 566 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF- 624
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
NI+I AL K A + S G+VPN T+ + + +G +E ++F +
Sbjct: 625 -NIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 683
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D G D+ ++ ++ G +T A + +++ T + I+ GK
Sbjct: 684 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGK 740
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 182/343 (53%), Gaps = 1/343 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL+A+V+ +Y + + PN++T +ILI V+ A VL ++ +
Sbjct: 103 LLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKL 162
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ P +VT TT++ G A +F D++ RG PD TYT +++G K+G A
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ +ME+ G +PN VTY +I++ K ++ EA ++ M + P +I
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQG 282
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
LC + ++A L + N MPD + ++ +CKEGK+ EA+ + E G P
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TY++L+ G +E+ EA +L+D M+ KG +P+VF+YN+LI G+CK+ E ++
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN 402
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
EM+ +G PN S++ LI GL + G+ E + +G++
Sbjct: 403 EMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNL 445
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 202/383 (52%), Gaps = 7/383 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY +II+ L + A LL +++ E C N+ + T+I ++ R A+ F
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKME---EAGCQPNVVTYSTIIDSHRKDRRVNEALDIF 261
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + + + N+L+ L ++ + N ++P++ T N+L+ +CK
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALL-NEMRSLNIMPDIVTFNVLVDTICK 320
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ V A VL M MG+ P++VT+++++ GY R ++ A+++F ++ +G PD +
Sbjct: 321 EGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFS 380
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +L++GY K+ R+ +A ++ +EM G+ PN V+Y +I C+ EARNL +M
Sbjct: 381 YNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMH 440
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+P+ ++D C++G A L++ + P+ + + +I +CK G +
Sbjct: 441 TNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLR 500
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A+KLF E F +G P+ Y T+I G+C+ L EA + +M E G P+ +YN++I
Sbjct: 501 DARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVII 560
Query: 437 QGFCKIGNAKEGIRILEEMLDKG 459
+GF + ++++ EM DKG
Sbjct: 561 RGFLHHKDESRAVQLIGEMRDKG 583
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 198/389 (50%), Gaps = 5/389 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I G A ++E+ Q +V + +T++++ +++R + +F +
Sbjct: 206 YTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK 265
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + P++FT N LI+ LC + A +L+EM S+ ++P++VT ++ G +
Sbjct: 266 VK-GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ V + + G PD TY+ LM GY + +A K+ D M G +P+ +Y ++
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNIL 384
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I +CK K+ EA+ L ++M+ + P++ +I LC+ G + +A L+K +
Sbjct: 385 INGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN 444
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAELTEAGR 415
+P+ S ++ CK+G +A +LF + S P+L+ YN LI MC+S L +A +
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARK 504
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ ++ KG++PN Y +I G CK G E + M + GC P++ S++++I G
Sbjct: 505 LFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFL 564
Query: 476 ESGNEGEVGKVVSMATASG---SVESDSW 501
+E +++ G V + +W
Sbjct: 565 HHKDESRAVQLIGEMRDKGFIADVGTTAW 593
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 185/361 (51%), Gaps = 2/361 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R +LA +I K +Q ++ + TL+N L + ++ +F + + P+V+T
Sbjct: 148 RVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR-GCRPDVYTY 206
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+I LCK + A +L +M G PN+VT++TI+ + + A +F +
Sbjct: 207 TTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKV 266
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G PD TY L+ G + +A +++EM + P+ VT+ V+++ CK K E
Sbjct: 267 KGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSE 326
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A+ +L M + P ++ +V +A +L+ ++ K C PD + +I+
Sbjct: 327 AQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILIN 386
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK +I EAK+LF+E +G P+ ++YNTLI G+C+ L EA L+ +M G P
Sbjct: 387 GYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLP 446
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N+FTY++L+ GFCK G + R+ M PN +++LI+ + +SGN + K+
Sbjct: 447 NLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506
Query: 488 S 488
S
Sbjct: 507 S 507
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+ +D A Q+F+ H + N +Y+++IH L + + +L + N +
Sbjct: 392 KRIDEAKQLFNEM--IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNL---P 446
Query: 115 NLFITVIRNYGLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
NLF I G + A + F ++ + ++ N L++A+ ++ +F
Sbjct: 447 NLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K + PN +I LCK+ ++ A+ M G P+ +++ I+ G++
Sbjct: 507 SELFVK-GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLH 565
Query: 233 RGDIENAKRVFGDILDRGWVPDATT 257
D A ++ G++ D+G++ D T
Sbjct: 566 HKDESRAVQLIGEMRDKGFIADVGT 590
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 221/462 (47%), Gaps = 51/462 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II+ L ++ A L EL + +P++ + T+I + AG E A +
Sbjct: 39 TYNTIINGLCKSNDLGAGMELFEELVERGHHPDVV----TYNTLIDSLCKAGDLEEARRL 94
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-HLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ +V + + L+N L + R D L+ + +R V+PN+ T N + L
Sbjct: 95 HGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154
Query: 196 CKKDDVEGAIRVLDEM--PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK+ A ++ + S+ + P+ VT +T++ G G I+ A VF D++ G+VP
Sbjct: 155 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 214
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TY L++G K ++ A +++ M D GV P+ +TY V+++AFCK + EA LL
Sbjct: 215 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 274
Query: 314 DDMLQRKYVPSSALCCKV-----IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
M R P+ + KV I C+ G E A L++ ++ KN PD +I
Sbjct: 275 HGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV-- 425
LCK G++ A+ + D G P+++TYN L+ G+C+S + EA + ++MV G
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394
Query: 426 ---------------------------------EPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+P+ TYN+L+ G K G ++ I +L
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
EEM+ KG P+ +F+ GL+ SGN +++ + A G
Sbjct: 455 EEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKG 496
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 184/343 (53%), Gaps = 14/343 (4%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V N +L +L + +F+ + V P + T N +I LCK +D+ + +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+E+ G P++VT+ T++ GD+E A+R+ GD+ RG VP+ TY+VL++G K+
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 269 GRLTDAVKVMDEMEDNGVE--PNEVTYGVMIEAFCKGKKSGEA----RNLLDDMLQRKYV 322
GR+ +A +++ EM + PN +TY ++ CK + EA R+L D L +
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL--RVS 178
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P + +ID LC+ G++++AC ++ ++ +P+ + +++ LCK K+ A +
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF-----TYNMLI 436
+ ++G P ++TY+ L+ C+++ + EA L M +G PNV T+N+LI
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G CK GN ++ + EEM+ K P+ +F LI+GL ++G
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 209/437 (47%), Gaps = 19/437 (4%)
Query: 67 AGKFHPNFSH-----NYDTYHSIIHKLARARAFDAVESLLTELKQN-----PEIKCGENL 116
A + H + S N TY +I+ L + D L+ E+ + P I +
Sbjct: 91 ARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 150
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ + A EL LR V + +TL++ L + + D +F +
Sbjct: 151 LDGLCKQSMTAEACELMRS--LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 208
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
VPNV T N L+ LCK D +E A +++ M G+ P+++T++ ++ + +
Sbjct: 209 AG-GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 267
Query: 237 ENAKRVFGDILDRG-----WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+ A + + RG VPD T+ +L+ G K G A + +EM ++P+ +
Sbjct: 268 DEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 327
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T+G +I+ CK + AR++LD M P+ ++ LC+ G++E+AC+ + +
Sbjct: 328 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 387
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAEL 410
+ C+PD+ ++++ LC+ + +A +L E + G P +TYN L+ G+ +S +
Sbjct: 388 VSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKT 447
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A + ++MV KG +P+ FT+ G + GN + +L +L KG P+ T+ S +
Sbjct: 448 EQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 507
Query: 471 IEGLYESGNEGEVGKVV 487
++ + SG +V ++
Sbjct: 508 LDWVCRSGKLDDVKAMI 524
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 190/412 (46%), Gaps = 37/412 (8%)
Query: 3 RHLHQKITAPSCLL----------------QSIGGARCSLSTITVTPPIKPWPQRLYPKR 46
R L Q++T SC + QS+ C L ++ P +
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186
Query: 47 LVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARA----RAFDAVESL 100
L+ + + +D A +F AG + PN TY+++++ L +A RA +ES+
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVI----TYNALVNGLCKADKMERAHAMIESM 242
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR-----SLNTL 155
+ + P++ + ++ + A R + A++ + +V + N L
Sbjct: 243 VDK-GVTPDVI----TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ + ++ +F+ K + P+V T LI LCK VE A +LD M ++G
Sbjct: 298 IAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ PN+VT+ ++ G G IE A + +++ G VPD+ TY L+ + R DA+
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+++ E++ G +P+ VTY ++++ K K+ +A +L++M+ + + P S L
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
G + EL + +L K +PD S+I+ W+C+ GK+ + K + EFE
Sbjct: 477 HRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query: 366 IIHWLCKEGKIWEAKKLF-DEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ LC+ G A ++F E R G P+++TYNT+I G+C+S +L L++++VE+
Sbjct: 7 VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G P+V TYN LI CK G+ +E R+ +M +GC PN ++S+LI GL + G E
Sbjct: 67 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126
Query: 484 GKVVSMAT 491
+++ T
Sbjct: 127 RELIQEMT 134
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 207/420 (49%), Gaps = 7/420 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++S+I A F ++E +L ++ + E F+ + + YG A PE AV F R
Sbjct: 62 TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVV-EKCFVVIFKAYGKAHLPEKAVGLFDR 120
Query: 140 IE-KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN---SRHKFKVVPNVFTCNILIKAL 195
+ +F +R+V+S N++LN ++Q + L F N + PNV T N++IK +
Sbjct: 121 MAYEFECKRTVKSFNSVLNVIIQEGLF-YRALEFYNHVIGAKGVNISPNVLTFNLVIKTM 179
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK V+ A+++ +MP P++ T+ T++ G I+ A + ++ G P
Sbjct: 180 CKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSP 239
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+ VL++G K G L K++D M G PNEVTY +I C K +A +LLD
Sbjct: 240 VTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDR 299
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+ K VP+ +I+ L ++G+ D + + + + + S +I L KEGK
Sbjct: 300 MVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGK 359
Query: 376 IWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EA +LF E + + Y+ +I G+C + EA + +M +PN +TY+
Sbjct: 360 SQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSS 419
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L++GF + GN + I + ++M N+ +S+LI GL + G E V + G
Sbjct: 420 LMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKG 479
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 208/432 (48%), Gaps = 10/432 (2%)
Query: 60 ALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI 118
AL+ + H G N S N T++ +I + + D + ++ P KC +++
Sbjct: 150 ALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDM---PVSKCQPDVYT 206
Query: 119 TVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
GL A R + AV ++ S + N L+N L + V + N
Sbjct: 207 YCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMF 266
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K PN T N LI LC K +E AI +LD M S VPN+VT+ TI+ G V +G
Sbjct: 267 LK-GCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRA 325
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ RV + +RG+ + Y+ L+ G K G+ +A+++ EM E N + Y +
Sbjct: 326 LDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAV 385
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ C+ K EA +L +M + P++ ++ E G A E+WK + + N
Sbjct: 386 IDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNF 445
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+ S +IH LCK+GK+ EA ++ + +G P ++ Y ++I G+ + + +A +
Sbjct: 446 TQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQ 505
Query: 416 LWDDMV--EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+++M+ E +P+V TYN+L+ CK + I +L MLD+GC P+ + + +
Sbjct: 506 LYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRT 565
Query: 474 LYESGNEGEVGK 485
L E + + G+
Sbjct: 566 LREKLDPPQDGR 577
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 135/317 (42%), Gaps = 44/317 (13%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D+T Y+ L+D Y LG KV+D M E + V+ +A+ K +A L
Sbjct: 60 DSTFYS-LIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLF 118
Query: 314 DDMLQR---------------------------------------KYVPSSALCCKVIDL 334
D M P+ VI
Sbjct: 119 DRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKT 178
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
+C+ G V+DA ++++ + C PD T++ LCK +I EA L DE + G PS
Sbjct: 179 MCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPS 238
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+T+N LI G+C+ +L +L D+M KG PN TYN LI G C G ++ I +L+
Sbjct: 239 PVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLD 298
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDL 512
M+ C PN ++ +I GL + G + +V+++ G V ++ L++ + +
Sbjct: 299 RMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEG 358
Query: 513 DSGAGA--LDELLVKNC 527
S E+ VK C
Sbjct: 359 KSQEAMQLFKEMTVKEC 375
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 115/255 (45%), Gaps = 26/255 (10%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN- 174
++ VI G+P+ A++ + + + + ++L+ + M+K+
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
++H F N ++LI LCK V+ A+ V +M G P++V + +++ G G
Sbjct: 441 AKHNF--TQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAG 498
Query: 235 DIENAKRVFGDIL--DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+E+A +++ ++L + PD TY +L++ K ++ A+ +++ M D G +P+ VT
Sbjct: 499 LVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558
Query: 293 YGVMIEAF---------------------CKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+ + K ++ A +++ MLQ+ P + +V
Sbjct: 559 CIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRV 618
Query: 332 IDLLCEEGKVEDACE 346
++ LC KV+ A +
Sbjct: 619 VEDLCNPKKVQAAIQ 633
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 164/594 (27%), Positives = 267/594 (44%), Gaps = 97/594 (16%)
Query: 11 APSCLLQSIGGARCSLSTITVTPPIKPWPQ------RLYPKRLVSMIFRQQNLD--LALQ 62
+P+ L Q + + TI + P + P L P L S+ F NL AL
Sbjct: 33 SPNSLQQDLPS---QIFTILLQPQWRKNPSFNTLIPSLTPTHLSSL-FNNPNLHPLTALN 88
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES--------------------LLT 102
F + H F H +Y ++ L R A E+ LLT
Sbjct: 89 FFKWIHYQH-GFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLT 147
Query: 103 ELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA---- 158
+ + + LF+ + R +GL K L V+ ++ S NT++NA
Sbjct: 148 HHEFSLSVTSYNRLFMVLSR-FGLIDELNCLFKDMLND---GVEPNLISFNTMVNAHCKI 203
Query: 159 --LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+V K Y LM KF + FT LI CK ++ A +V + MP G
Sbjct: 204 GNVVVAKAY-FCGLM------KFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+ N V++T ++ G+ G I+ A +F + + G PD TYTVL+ + ++G+ T+A+K
Sbjct: 257 LRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALK 316
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+EM +NG+EPN TY V+I+ FCK K E +L ML++ V S +ID C
Sbjct: 317 FFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYC 376
Query: 337 EEGKVEDA-CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSL 394
+ G +EDA C L L K C P++ + +I C++ + A L ++ +E P+L
Sbjct: 377 KRGMMEDAICVLDSMKLNKVC-PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435
Query: 395 LTYNTLIAGMCES-----------------------------------AELTEAGRLWDD 419
+TYNTLI G+C++ ++ +A ++++
Sbjct: 436 VTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ EK E N F Y LI G+CK + + + ML +GCFPN +F++L++GL +
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK--- 552
Query: 480 EGEVGKVVSMATASGSVES----DSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
EG+V +S+ G ++ ++ L+ I+ SD D LD+++ C
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGC 606
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 198/416 (47%), Gaps = 7/416 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +I + G+ + A++ F ++++ V + L+ A + + + L F
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGK-ETEALKFFEEM 321
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ + PNV+T +LI CK ++ + +L M G+V ++V ++ GY RG +
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E+A V + P++ TY L+ G+ + + A+ ++++M +N + PN VTY +
Sbjct: 382 EDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTL 441
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I CK + A L M++ +VP C ID LC+ GKVE A ++++ L K+
Sbjct: 442 IHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA 501
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ + + +I CK K +A LF FE G P+ +T+N L+ G+ + ++ +A
Sbjct: 502 EANEFLYTALIDGYCKAEKFSDAHLLFKRMLFE-GCFPNSITFNVLLDGLRKEGKVEDAM 560
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L D M + +P V TY +LI+ + + L++M+ GC PN +++ I+
Sbjct: 561 SLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAY 620
Query: 475 YESGNEGEVGKVVSMATASGS-VESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
G E ++V G ++S ++ L+ + LDS G L + C
Sbjct: 621 CRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGC 676
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 230/521 (44%), Gaps = 55/521 (10%)
Query: 22 ARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYD 79
A C L ++ + K P L+ R++++D A+ + + Y K PN
Sbjct: 384 AICVLDSMKLN---KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLV---- 436
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++IH L +AR D+ L + ++ + + F I G+ E A + F
Sbjct: 437 TYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP-DQRTFCAFIDCLCKMGKVEQAHQVFES 495
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK-------------------------- 173
+++ + + + L++ + +++ HL+FK
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555
Query: 174 --------NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+ KF P V T ILI+ + ++ D + A LD+M S G PN+VT+T
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+ Y +G + A+ + I + G + D+ Y VL++ Y +G+L A V+ M D G
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
EP+ TY ++++ K + E L D+ +A K+ D E
Sbjct: 676 CEPSRQTYSILLKHLIFEKYNKEGMGL--DLNSTNISVDNANIWKIADF-------EIIT 726
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
L+++++ + C+P+ S +I LCK + A +LF+ E G PS +N+L++
Sbjct: 727 MLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSC 786
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ EA RL D M+E ++ +Y +L+ G + GN ++ I +L G ++
Sbjct: 787 CKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDE 846
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFL 504
+ +L++GL G E ++ + +G + SD+ L
Sbjct: 847 VVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 199/377 (52%), Gaps = 5/377 (1%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P R+ +I Q + LA +IF YA + PNF H+Y +Y +I KL RA+ F ++ LLT+
Sbjct: 67 PSRVQKLIASQSDPLLAKEIFDYASR-QPNFQHSYSSYLILILKLGRAKYFSFIDDLLTD 125
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
LK LF +I YG A P+ A+K F I KF+ S + LN +L LV ++
Sbjct: 126 LKSK-NYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQ 184
Query: 164 RY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
Y +FK++ H + V PN + NILI+A C + A + ++M ++P++ +
Sbjct: 185 NYIKPAFDLFKDA-HTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVES 243
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ + + A + D+L++G+VPDA +YT L++ + +L +A K++ M+
Sbjct: 244 YRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMK 303
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G P+ + Y +I FC+ ++ +A +L+DM +P+ ++ LC++G +
Sbjct: 304 VKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFD 363
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLI 401
+A + ++ K P A+S+ +I C GKI EA + +E + G P T+ ++
Sbjct: 364 EAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMV 423
Query: 402 AGMCESAELTEAGRLWD 418
+ +CE +L G + D
Sbjct: 424 SRICEVDDLQRIGEILD 440
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 194/392 (49%), Gaps = 30/392 (7%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCKKDD-- 200
N Q S S L+ L + K + + + + + K + V P +F+ I I D
Sbjct: 95 NFQHSYSSYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSYIINIYGEANLPDKA 154
Query: 201 --VEGAIRVLDEMPSM----GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
+ I D PS G++ LV+H I+ A +F D P+
Sbjct: 155 LKIFYTILKFDCNPSPKHLNGILEILVSHQNY---------IKPAFDLFKDAHTYDVFPN 205
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+Y +L+ + G+++ A + ++M V P+ +Y ++++A C+ + A +LL+
Sbjct: 206 TKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLE 265
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
DML + YVP + +++ LC + K+ +A +L R+ K C PD +T+I C+EG
Sbjct: 266 DMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREG 325
Query: 375 KIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ +A K+ ++ E G +P+L++Y TL+ G+C+ EA ++M+ KG P+ N
Sbjct: 326 RAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSN 385
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
LI+GFC +G +E ++EE+L G P+ ++ +++ + E + +G+++
Sbjct: 386 ALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILD-KVKK 444
Query: 494 GSVESDSWNFLLTRIVSDLDSGAGALDELLVK 525
++ D TRIV ++G G L+E L+K
Sbjct: 445 VELKGD------TRIV---EAGIG-LEEYLIK 466
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 177/328 (53%), Gaps = 3/328 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SV L+ +V+ +R DLV +++ K ++ ++++ NILIK C + A+
Sbjct: 78 SVVDFCKLMGVVVRMERPDLVISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
++ +G+ P++VT TT+L G + A F + + P+ T+T LM+G +
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSA 326
GR+ +AV ++D M ++G++P ++TYG +++ CK + A NLL M + + +P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ +ID LC++G+ DA L+ + K PD +++I C G+ +A++L E
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
ER P ++TYN LI + + EA L+D+M+ +G+ PN TYN +I GFCK
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ M KGC P+ +F+ LI+G
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDG 404
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 205/412 (49%), Gaps = 13/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I+ + + + +LL ++++ I ++ +I + GR A F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ + + + N+++ + R+ + + + K+ P+V T N LI A K+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEG 339
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A + DEM G++PN +T+ +++ G+ + ++ A+ +F + +G PD T+T
Sbjct: 340 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 399
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY R+ D ++++ EM G+ N VTY +I FC A +L M+
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 459
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-----------NCMPDNAISSTIIH 368
P C ++D LC+ GK++DA E++K + + PD + +I
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L EGK EA++L++E RG +P +TY+++I G+C+ + L EA +++ M K P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 579
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV T+N LI G+CK G +G+ + EM +G + + LI G + GN
Sbjct: 580 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 631
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 200/397 (50%), Gaps = 12/397 (3%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ R D V SL ++++ +I+C F +I+ + + A+ TF +I K +
Sbjct: 89 VVRMERPDLVISLYQKMERK-QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 148 SVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V + TLL+ L R D H MF+ + PNV T L+ LC++ +
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR-----PNVVTFTTLMNGLCREGRIVE 202
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLM 262
A+ +LD M G+ P +T+ TI+ G +GD +A + + + +P+ Y+ ++
Sbjct: 203 AVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K GR +DA + EM++ G+ P+ TY MI FC + +A LL +ML+RK
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I+ +EGK +A EL+ +L + +P+ +++I CK+ ++ A+ +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F +G P + T+ TLI G C + + + L +M +G+ N TYN LI GFC
Sbjct: 383 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 442
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G+ + + ++M+ G P+ + + L++GL ++G
Sbjct: 443 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 221/468 (47%), Gaps = 28/468 (5%)
Query: 57 LDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
L AL F K HP+ T+ +++H L D V L Q E C
Sbjct: 130 LPFALSTFGKITKLGLHPDVV----TFTTLLHGLCVE---DRVSEALDFFHQMFETTCRP 182
Query: 115 NL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM- 171
N+ F T++ GR AV R+ + +Q + + T+++ + K+ D V +
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC--KKGDTVSALN 240
Query: 172 -FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ ++PNV + +I +LCK A + EM G+ P+L T+ +++ G+
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G +A+++ ++L+R PD TY L++ ++K G+ +A ++ DEM G+ PN
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 360
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY MI+ FCK + A ++ M + P +ID C +++D EL
Sbjct: 361 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 420
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ R+ + + +T+IH C G + A L + G P ++T NTL+ G+C++ +
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 480
Query: 410 LTEAGRLWDDMVEK-----------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
L +A ++ M + GVEP+V TYN+LI G G E + EEM +
Sbjct: 481 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 540
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLL 505
G P+ ++S +I+GL + E ++ VSM + S S ++N L+
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 183/391 (46%), Gaps = 20/391 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I + + E LL E+ K +P++ L ++ EL +
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R + + + N++++ + R D MF K P+VFT LI C
Sbjct: 352 LPR----GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLIDGYC 406
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + +L EMP G+V N VT+ T++ G+ GD+ A + ++ G PD
Sbjct: 407 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 466
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMED-----------NGVEPNEVTYGVMIEAFCKGKK 305
T L+DG G+L DA+++ M+ NGVEP+ +TY ++I K
Sbjct: 467 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGK 526
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M R VP + +ID LC++ ++++A +++ + K+ P+ +T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNT 586
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ CK G++ + +LF E RG + + Y TLI G + + A ++ +M+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG 646
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
V P+ T ++ GF + + +LE++
Sbjct: 647 VYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 2/245 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A +F D+L +P + LM +++ R + + +ME + + ++ +
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ FC K A + + + P ++ LC E +V +A + + ++
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
C P+ +T+++ LC+EG+I EA L D E G P+ +TY T++ GMC+ + A
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 415 RLWDDMVE-KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L M E + PNV Y+ +I CK G + + EM +KG FP+ +++ +I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 474 LYESG 478
SG
Sbjct: 300 FCSSG 304
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 19/254 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N TY+++IH +A L ++ + P+I L + N G+ + A
Sbjct: 429 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN----GKLKDA 484
Query: 134 VKTFLRIEK----------FN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
++ F ++K FN V+ V + N L+ L+ ++ +++ H+ +V
Sbjct: 485 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR-GIV 543
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T + +I LCK+ ++ A ++ M S PN+VT T++ GY G +++ +
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 603
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ RG V DA Y L+ G+ K+G + A+ + EM +GV P+ +T M+ F
Sbjct: 604 FCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWS 663
Query: 303 GKKSGEARNLLDDM 316
++ A +L+D+
Sbjct: 664 KEELERAVAMLEDL 677
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A +L DML+ + +PS CK++ ++ + + L++++ RK D + +I
Sbjct: 62 DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILI 121
Query: 368 HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
C K+ A F + + G P ++T+ TL+ G+C ++EA + M E
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR 181
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
PNV T+ L+ G C+ G E + +L+ M++ G P + ++ +++G+ + G+
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ +++++ L + R D MF + K PNV T N LI CK V+ + + E
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFVSMGSK-SFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+V + + + T++ G+ G+I A +F +++ G PD T ++ G+
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666
Query: 271 LTDAVKVMDEME 282
L AV ++++++
Sbjct: 667 LERAVAMLEDLQ 678
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 242/480 (50%), Gaps = 37/480 (7%)
Query: 39 PQRL------YPKRLVSMIFRQQNL--DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR 90
PQ L Y L + R+ L L FH A + + ++ + +Y ++H L
Sbjct: 55 PQSLHNLTFKYSDHLTDSLLRRLRLHPSACLSFFHLATQ-NSHYRPHSLSYSILLHILTH 113
Query: 91 ARAFDAVESLLTELKQNPEIKCGEN----------------------LFITVIRNYGLAG 128
AR F ++L +L ++ C N +F +++ + G
Sbjct: 114 ARLFPEATTVLRQLM---DLHCTNNYRAYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERG 170
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
+ A+ F + + +RS + LL LVQ K V +M + +VP+V+ C
Sbjct: 171 MTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQ-KGEGRVAVMVFDQIVGTGIVPDVYMC 229
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+I++ A C+ V+ A+ VL++M G+ PN+VT+ ++ GYV RGD E +RV + +
Sbjct: 230 SIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSE 289
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSG 307
RG + T T+LM GY K G++ +A K++ E+ ED + +E YGV+++ +C+ +
Sbjct: 290 RGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRME 349
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A + D+ML+ + +C +I C+ G+V +A ++ ++ N PD +T++
Sbjct: 350 DAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLL 409
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
C+EGK+ +A L +E G P+++TYNT+I G+ + +A LW MVE+GV
Sbjct: 410 DGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVT 469
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PN + ++ F K+G++ + + +E+L +G + +F+ +I GL + G E G V
Sbjct: 470 PNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 172/352 (48%), Gaps = 3/352 (0%)
Query: 125 GLAGRPEL-AVKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
G GR + V+ LR+ + V R+V + L+ + + D + + +V
Sbjct: 270 GYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLV 329
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
+ +L+ C+ +E A+R+ DEM +G+ N+V T++ GY G + A+RV
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++D PD +Y L+DGY + G+++ A + +EM +G+ P VTY +I+
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+A +L M++R P+ CC ++D + G + A LWK +L +
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I LCK GK+ EA +FD E G P +TY TL G C++ + EA ++ M
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVME 569
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ + ++ YN LI G KI + +L EM +G PN ++ LI G
Sbjct: 570 RQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 163/342 (47%), Gaps = 36/342 (10%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N +I LCK + A V D M +G+ P+ +T+ T+ GY G+++ A ++ G +
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+ Y L+DG K+ +L D ++ EM+ G+ PN VTYG +I +C +K +
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-------------- 354
A +L +M++R + P+ +C K++ L + ++ +A + ++L
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLV 690
Query: 355 ---------------------NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
N + +N + + I LCK GK+ EA+ + RG +P
Sbjct: 691 KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
TY TLI S + EA +L D+M+EKG+ PN+ YN LI G CK+GN R+
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ KG PN ++++LI G+ + ++ T G
Sbjct: 811 YKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEG 852
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 190/436 (43%), Gaps = 80/436 (18%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKN 174
T+I+ Y G+ A + F+ + +N++ S NTLL+ + +K + L M +
Sbjct: 372 TLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGD 431
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P V T N +IK L + A+ + M G+ PN ++ T+L + G
Sbjct: 432 G-----ITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMG 486
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
D + A ++ +IL RG+ + ++ G K+G+L +A V D M++ G+ P+E+TY
Sbjct: 487 DSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYR 546
Query: 295 VMIEAFCKG-----------------------------------KKSGEARNLLDDMLQR 319
+ + +CK +K + +LL +M R
Sbjct: 547 TLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTR 606
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI--- 376
P+ +I C+E K++ A L+ ++ + P+ + S I+ L ++ +I
Sbjct: 607 GLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEA 666
Query: 377 -----------------------------WEAKKLFDEFERGSIPSLLT----YNTLIAG 403
EA+K+ D ++ I + L+ YN I G
Sbjct: 667 TVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDG 726
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C+S +L EA + ++ +G P+ FTY LI GN E ++ +EML+KG PN
Sbjct: 727 LCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPN 786
Query: 464 KTSFSLLIEGLYESGN 479
T ++ LI GL + GN
Sbjct: 787 ITIYNALINGLCKLGN 802
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 183/397 (46%), Gaps = 15/397 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
P + ++ F+ + D A+ ++ G+ + ++T S + K+ + AV
Sbjct: 470 PNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+ EL +P+ E + T+ Y G + A + +E+ + S+ N+L++
Sbjct: 530 FDRMKELGLSPD----EITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLID 585
Query: 158 ALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
L + ++ D+ L+ + PNV T LI C + ++ A + EM G
Sbjct: 586 GLFKIRKLNDVTDLLVEMQTRGLS--PNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGF 643
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+V + I+ I A + +LD + + D +K +A K
Sbjct: 644 TPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDIL---AVHNKCSDKLVKNDLTLEAQK 700
Query: 277 VMDEMEDNGV---EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
+ D ++ + + N + Y + I+ CK K EAR++L ++ R ++P + C +I
Sbjct: 701 IADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIH 760
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIP 392
G V++A +L +L K +P+ I + +I+ LCK G I A++LF + +++G +P
Sbjct: 761 ACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVP 820
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+ +TYN LI C +L +A RL + M E+G+ +
Sbjct: 821 NAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRI 857
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 16/238 (6%)
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ P + +Y++L+ +A V+ ++ D N Y V F K+ G
Sbjct: 97 YRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCS 156
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ D ML + + E G + A ++ + R +P S ++ L
Sbjct: 157 GVFD-MLMKAFA--------------ERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKL 201
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
++G+ A +FD+ G +P + + ++ C+ + A + + MV++G+EPNV
Sbjct: 202 VQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNV 261
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
TYN L+ G+ G+ + R+L M ++G N + ++L+ G + G E K++
Sbjct: 262 VTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLL 319
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEA----RNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+++ P+ ++Y +++ + EA R L+D Y + A+C V + E
Sbjct: 93 QNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNY-RAYAVCNHVFSVYKE 151
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
G + + ++ + G A +FDE R G +P L +
Sbjct: 152 FGFC------------------SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRS 193
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+ L+ + + E A ++D +V G+ P+V+ ++++ C++G + +LE+M+
Sbjct: 194 CSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMV 253
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G PN +++ L+ G G+ V +V+ + + G
Sbjct: 254 KEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 209/406 (51%), Gaps = 9/406 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
KPW + + L + ++ + AL +FH + F H+Y +Y S+I+KLA++R FD
Sbjct: 45 KPWEEVPFLTDLKEI----EDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFD 98
Query: 96 AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
AV+ +L L + ++C E+LF+ +I++YG AG + A+ F +I F+ R+++SLNTL
Sbjct: 99 AVDQIL-RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTL 157
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+N LV N + F ++ ++ PN + NILIK K D E A +V DEM M
Sbjct: 158 INVLVDNGELEKAKSFFDGAK-DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++VT+ +++G D+ AK + D++ + P+A T+ +LM G G +A
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+M +ME G +P V YG+++ K + EA+ LL +M +R+ P + +++ L
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSL 394
C E +V +A + + K C P+ A +I C+ + + P+
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
T+ ++AG+ + L A + + M +K + + L+ C
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 200/398 (50%), Gaps = 6/398 (1%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTC 188
PE A+ F + ++ + S ++L+ L +++ +D V + + R++ + ++F
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K V+ AI V ++ S V + + T++ V G++E AK F D
Sbjct: 122 --LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
P++ ++ +L+ G++ A KV DEM + V+P+ VTY +I C+ G+
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A++LL+DM++++ P++ ++ LC +G+ +A +L + + C P ++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G+I EAK L E ++ I P ++ YN L+ +C + EA R+ +M KG +P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TY M+I GFC+I + G+ +L ML P +F ++ GL + GN V+
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Query: 488 S-MATASGSVESDSWNFLLTRI-VSDLDSGAGALDELL 523
M + S S +W LL+ + + D AL E++
Sbjct: 420 EVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVI 457
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 242/501 (48%), Gaps = 53/501 (10%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
Q L P +V ++ Q + AL+ F +A K + HN D Y ++I L RA+ F ++S
Sbjct: 179 QDLNPDAVVKVLNLQTDAQNALRFFQWADK-QEGYDHNTDAYFTMIDILGRAKMFTELQS 237
Query: 100 LLTELK-QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSV--RSLNTLL 156
LL +++ Q EI ++ + + +YG +GR + +++ F +++ + + + N++L
Sbjct: 238 LLQKMQTQGREIT--RSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVL 295
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL-----IKALCKKDDVEGAIRVLDEM 211
+LV+NK+ D+ +F +++ N +CN L I+ K+ +E A+++LD+M
Sbjct: 296 VSLVKNKKLDMAENLFA------QMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDM 349
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
P++VT+T ++ R IE A V + + G P+ TY L+ G + R
Sbjct: 350 IQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRP 409
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A++++ ME GV PN TY ++ CK ++ A+ + ++ L R P+ +
Sbjct: 410 EEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTL 469
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE---- 387
++ C ++ +A ++ K + + +C PD+ +T+I L + ++ +A ++ DE E
Sbjct: 470 LNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGY 529
Query: 388 --------------------------------RGSIPSLLTYNTLIAGMCESAELTEAGR 415
RG S Y I + + E+ EA
Sbjct: 530 DVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQA 589
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L +M+ KG PN+ TYN +I+GFC+ G + +L M++ G P+ S+++LI+ +
Sbjct: 590 LLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFH 649
Query: 476 ESGNEGEVGKVVSMATASGSV 496
G + ++ + A G V
Sbjct: 650 NQGRTQDADQLYATALERGVV 670
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 157/344 (45%), Gaps = 11/344 (3%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRP 130
N++ + TY +I L + + + +L ++++N C N++ +I+ RP
Sbjct: 353 NYAPDVVTYTIVISALCKRKMIEQAYGVLQKMREN---GCEPNIYTYNALIQGLCAVRRP 409
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E A++ +E+ V ++ + L + L + +R D MF + + + PN T N
Sbjct: 410 EEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALAR-GLKPNRVTYNT 468
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ C+ + A+ +L EM P+ VT+TT++ G V + +A R+ ++ ++G
Sbjct: 469 LLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG 528
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ + T +L G ++G DA M+D G + Y + I + EA+
Sbjct: 529 YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQ 588
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL +M+ + Y P+ +I C +G+++DA + ++ PD + +I
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEF 648
Query: 371 CKEGKIWEAKKLF-DEFERGSI----PSLLTYNTLIAGMCESAE 409
+G+ +A +L+ ERG + P + + L G+ S E
Sbjct: 649 HNQGRTQDADQLYATALERGVVLNPKPVIQEPDELPEGLVRSQE 692
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 2/347 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N LL L ++ R D V+ + N VPN +T L+++LC+ E A V
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTY-NDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G PN+ +++ ++ G ++ A + +++D G P+ TY L+ G K+G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L +AV + M G P+ V Y V+I+ F K GEA L ++ML++ +P+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
++ +G+ L+K +LR+ C+P+ + ++ CK G + EA +LF E G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +++YNTL+ GMC + EA RL +M+ GV P++ +YN+LI G+ K G I
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ E+ G P+ S+S +I+ L +G G V A+GS
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 172/321 (53%), Gaps = 2/321 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL +L Q +R++ +F+ + PNVF+ +ILI LC+ V+ A +L+EM
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDG 116
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G PN+VT+ ++L G G ++ A +F ++ RG PD Y VL+DG+ K G + +A
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ +EM + G P TY ++ F + + G ++L DML++ VP+ ++D
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
C+ G + +A L+ + C PD +T++ +C +GK EA++L E R + P
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+++YN LI G +S L A +L+ ++ + G+EP+ F+Y+ +I C+ G + +
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 454 EMLDKGCFPNKTSFSLLIEGL 474
+M+ G P+ L+ GL
Sbjct: 357 DMIANGSAPDAAVVIPLVIGL 377
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 192/407 (47%), Gaps = 7/407 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAV 134
N TY ++ L +A+ F+ S+ + C N+F I GL + + A
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ---GCSPNVFSYSILIAGLCRGQKVDEAA 107
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + Q +V + +LL+ L + + +F ++ P+ N+LI
Sbjct: 108 ELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYR-GCPPDGVVYNVLIDG 166
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
KK D+ A R+ +EM G +P + T+ ++L G+ +G+ + +F D+L +G VP+
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+ L+DG+ K+G + +A ++ EM G P+ V+Y ++ C K EA+ LL
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLR 286
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M++ P +ID + G ++ A +L+ + + PD STII LC+ G
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Query: 375 KIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ A +F D GS P L+ G+C LTE+ L+ MV+ P + YN
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+L+ CK + + I E+ ++G P+ +++E L S ++
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDK 453
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 13/353 (3%)
Query: 47 LVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ + R Q +D A ++ + G PN TY S++ L + L + +
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVV----TYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 105 --KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ P N+ I G G A + F + + +V + N+LL+ +
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGE---AYRLFEEMLEKGCIPTVFTYNSLLSGFSRK 205
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ V +FK+ + VPN+FT N L+ CK D+ A R+ EM S+G P++V+
Sbjct: 206 GEFGRVQSLFKDMLRQ-GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ T++ G +G A+R+ +++ G PD +Y +L+DGY K G L A+K+ E+
Sbjct: 265 YNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+G+EP+ +Y +I+ C+ K G A + DM+ P +A+ ++ LC ++
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
++CEL++ +++ C+P + +++ LCK + + ++F E ERG P +
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 4/200 (2%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
++Y ++E K + +DML VP++ ++ LC+ + E+A +++
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ + C P+ S +I LC+ K+ EA +L +E + G P+++TY +L++G+C+ +
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L EA L+ MV +G P+ YN+LI GF K G+ E R+ EEML+KGC P +++
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 470 LIEGLYESGNEGEVGKVVSM 489
L+ G +GE G+V S+
Sbjct: 198 LLSGF---SRKGEFGRVQSL 214
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
++++L + G+ + + +L C+P+ ++ LC+ + EA+ +F +G
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ +Y+ LIAG+C ++ EA L ++M++ G +PNV TY L+ G CK+G KE +
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLT 506
+ M+ +GC P+ +++LI+G + G+ GE ++ G + + ++N LL+
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 201/377 (53%), Gaps = 3/377 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I Y GR + A + + + ++ S+ + N+LLNA + + +FK K
Sbjct: 49 LIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK- 107
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVL-DEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
P+V T + +I LCK V A+ +L +M G N V + ++ G +IE
Sbjct: 108 GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIER 167
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++ ++ +G+VPD TY ++ G ++G++++A + D M G P+ V Y +++
Sbjct: 168 AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A K K+ EA L D++ + Y+P + ++ L + +++A E++K+++ C P
Sbjct: 228 ALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAP 287
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ A S ++ C+ K+ +A K+ +E + G++P ++TYN L+ G+C++ + +A L+
Sbjct: 288 NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 347
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
MV+ G P++ +Y++++ G CK + + + M+++ P+ +F++L++GL ++
Sbjct: 348 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 407
Query: 478 GNEGEVGKVVSMATASG 494
G E ++ T SG
Sbjct: 408 GKLDEAKDLLDQMTCSG 424
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 178/326 (54%), Gaps = 3/326 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN +T +++K+ CK+ + ++ ++M G+ P+ + + ++ GY +G ++ A R+
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +++ G P TY L++ + K ++ +A+++ M + G EP+ VTY +I CK
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 303 GKKSGEARNLL-DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K EA +L M++R ++ +I+ LC++ +E A +L + + K +PDN
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+TI+ LC+ GK+ EAK+ FD RG P ++ YN L+ + + + EA +L+ D+
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ KG P+ TYN ++ G + N E + ++M+ GC PN ++S+++ G +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305
Query: 481 GEVGKVVSMATASGSV-ESDSWNFLL 505
+ KV+ + G+V + ++N LL
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILL 331
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 165/316 (52%), Gaps = 6/316 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ N L+N L +++ + + + + K VP+ T N ++ LC+ V A + D
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASK-GYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
MPS G P++V + +L G + A ++F D++ +G++PD TY ++ G +
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A ++ +M +G PN TY +++ C+ KK +A +L++M + VP
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++D LC+ V+ A EL+ ++ C PD S +++ LCK K+ +A+ LFD ER
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+P ++T+N L+ G+C++ +L EA L D M G P+ YN L+ G K G +
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449
Query: 450 RILEEMLDKG----CF 461
R+ + M +KG CF
Sbjct: 450 RLTQAMKEKGFLSDCF 465
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 167/312 (53%), Gaps = 7/312 (2%)
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
Y L M N + P+ NILI KK V+ A R+ +EM S+G+ P++ T+
Sbjct: 28 YKLFEQMLDNG-----ISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYN 82
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM-DEMED 283
++L + ++ A +F + ++G+ PD TY+ ++ G K G++T+A++++ +M +
Sbjct: 83 SLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIE 142
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G N V Y +I CK + A LL++M + YVP + ++ LC GKV +
Sbjct: 143 RGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSE 202
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIA 402
A + + + + PD + ++ L KEGK EA KLF D +G +P +TYN+++
Sbjct: 203 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILL 262
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+ + + EA ++ MV G PN TY++++ G C+ + ++LEEM G P
Sbjct: 263 GLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322
Query: 463 NKTSFSLLIEGL 474
+ ++++L++GL
Sbjct: 323 DVVTYNILLDGL 334
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 192/391 (49%), Gaps = 16/391 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELK 105
L++ ++ + A+++F + F + TY +II L + + +A+E L ++
Sbjct: 84 LLNAFCKETKMKEAMELFKTMAE--KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM- 140
Query: 106 QNPEIKCGENLFITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVR---SLNTLLNALV 160
E C N TV N + G + E + + +E+ + V + NT+L+ L
Sbjct: 141 --IERGCSAN---TVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLC 195
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ + F +S P+V N L+ AL K+ + A+++ ++ + G +P+
Sbjct: 196 RMGKVSEAKQFF-DSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDT 254
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ +IL G + +++ A+ +F ++ G P+ TY++++ G+ + ++ DA KV++E
Sbjct: 255 VTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEE 314
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G P+ VTY ++++ CK +A L M+ P V++ LC+ K
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
V DA L+ R++ + +PD + ++ LCK GK+ EAK L D+ G P + YNT
Sbjct: 375 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNT 434
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
L+ G+ + +A RL M EKG + F
Sbjct: 435 LMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTE 412
+ C P+ ++ CK+GK+ + KLF++ + G P + YN LI G + + E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A RL+++MV G+EP+++TYN L+ FCK KE + + + M +KG P+ ++S +I
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 473 GLYESGNEGEVGKVV--SMATASGSVESDSWNFLLTRIVSD 511
GL ++G E +++ M S + ++N L+ + D
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKD 162
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 235/488 (48%), Gaps = 24/488 (4%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF---DAV 97
+L P +V+++ +N D L+ F + + F H+ + S++++L R R F D V
Sbjct: 75 KLKPHHVVNILQTHKNTDSVLRFFFWISR-RKFFKHDMSCFVSMLNRLVRDRLFAPADHV 133
Query: 98 ESLLT-------ELKQ--------NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRI 140
L+ E+K+ N + G L F T++ G +LA ++++
Sbjct: 134 RILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKM 193
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
++ S+ + NT++N L + R L+ + ++ PN FT LI C+ +
Sbjct: 194 LNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI-FRYDAYPNAFTYTSLILGHCRNHN 252
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A + D M G PN VT++T++ G G +E A + +++ +G P TYT+
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+ G ++AV+++ +M+ G PN T+ +I + K A L ML
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP++ +I+ LC EG+ E A ++K +L +P + II C G I +A
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+FD+ + GS P+++TYNTLI G C+ L A RL + M G++P+ +TY LI GF
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ES 498
+ G + + M++ G PN +++ +I+G + + + SG++ S
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 499 DSWNFLLT 506
++N +++
Sbjct: 553 QTYNVMIS 560
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 187/383 (48%), Gaps = 7/383 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T+ ++I L+R F+ L ++ + + + +I + GR E A
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT-YNALINQLCVEGRFETAFTI 399
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + S ++ N ++ ++F + K PNV T N LI C
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF-DKMLKAGSSPNVITYNTLIYGYC 458
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A+R+L+ M G+ P+ T+T ++ G+ G +E+A +F +++ G P+
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT ++DGY L ++ DA+ + +M ++G P+ TY VMI F K EA N M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P+ ID LC G+ A +++ + ++N P+ S++I+ LC+EG+
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638
Query: 377 WEAKKLFDEFER----GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+A ++++ R G P++ TY TL+ G+C EA +L M +KG++P+ Y
Sbjct: 639 EDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 433 NMLIQGFCKIGNAKEGIRILEEM 455
L+ G CK + + I M
Sbjct: 698 RALLIGECKNLKVESALNIFYSM 720
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 243/530 (45%), Gaps = 27/530 (5%)
Query: 1 MLRHLHQKITAPSCL-----LQSIGGARCSLSTITVTPPIKPW---PQRLYPKRLVSMIF 52
ML + QK P+ L S+ A CS + + +K P L+S +
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353
Query: 53 RQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
R ++A+ ++H A P TY+++I++L F+ ++ + + +
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTV----TYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYD 166
+ + +I+ + L G + A+ F ++ K +V + NTL+ + N
Sbjct: 410 PSTQT-YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
L+ +M N + P+ +T LI + +E A + M G+ PN VT+T I
Sbjct: 469 LLEIMKGNG-----LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ GY +++A +F +++ G +P + TY V++ G+ K +++A +M G+
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGL 583
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA-- 344
PN +TY I+ C+ ++G A + +M +R Y P+ +I LC+EG+ EDA
Sbjct: 584 LPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEM 643
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
L RL C P+ +T++ LC EG+ +EA +L ++ G PS Y L+ G
Sbjct: 644 YNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C++ ++ A ++ M G + ++ Y LI CK +E I + ML+K +
Sbjct: 704 ECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLD 513
+ +++L++GL + G K++ + + + +L R +S LD
Sbjct: 764 EVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 186/409 (45%), Gaps = 15/409 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY S+I R D ++ + ++ C N + T+I GR E A+
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKD---GCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 135 KTFLRIEKFNVQRSVRS----LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + ++ +V + L +L +A ++ +L+ M K VPN+ T
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG-----CVPNIQTFTA 347
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI L + E AI + +M + G+VP VT+ ++ G E A +F +L G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+P TY ++ + +G + A+ + D+M G PN +TY +I +CK A
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL+ M P + ++I GK+E A L+ ++ P++ + II
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527
Query: 371 CKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K+ +A LF E G++PS TYN +I+G ++ ++EA MV++G+ PNV
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNV 587
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
TY I G C+ G +I EM + FPN ++S LI GL + G
Sbjct: 588 ITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 211/407 (51%), Gaps = 16/407 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN----LFITVIRNYGLAGRPELAVKT 136
YH+++ L++ F+ + +L Q+P G + F T+I+ L G+ A+
Sbjct: 92 YHTVL-SLSQQMEFEGINPVLFHF-QHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLF 149
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ Q TL++ L + DL+ + N V PNV + +I
Sbjct: 150 HDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL-----VQPNVVMYSTII 204
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+CK V A + EM S G+ PN+VT++ ++ G+ G +++A +F ++
Sbjct: 205 DGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIK 264
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD T+ +L+DG+ K G++ + V M G++PN VTY +++ +C K+ +A+++
Sbjct: 265 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSI 324
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M QR P +ID C+ KV++A L+K + K+ +PD +++I LCK
Sbjct: 325 LYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCK 384
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
GKI A KL DE +RG P ++TY++++ +C++ ++ +A L + ++G+ PN++T
Sbjct: 385 LGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYT 444
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y +LI G CK G ++ I E++L KG +++++I G G
Sbjct: 445 YTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 113/209 (54%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P++ + NILI CK V+ A+ + EM ++P++VT+ +++ G G I A
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ ++ DRG PD TY+ ++D K ++ A+ ++ +++D G+ PN TY ++I+
Sbjct: 393 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CKG + +A N+ +D+L + Y + +I C +G ++A L ++ +C+PD
Sbjct: 453 CKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDA 512
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERG 389
II L + + +A+KL + RG
Sbjct: 513 VTYEIIIRSLFDKDENDKAEKLREMITRG 541
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 77/210 (36%), Gaps = 56/210 (26%)
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
++P S++ V DA L+ RLLR+N P + I+ L K
Sbjct: 41 FIPYSSISTT----FHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVL 96
Query: 381 KLFDEFE-----------------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
L + E G P+ +T+ TLI G+C ++ +A D++V
Sbjct: 97 SLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAM 156
Query: 424 G-----------------------------------VEPNVFTYNMLIQGFCKIGNAKEG 448
G V+PNV Y+ +I G CK + +
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ EM+ KG PN ++S LI G + G
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVG 246
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 231/476 (48%), Gaps = 10/476 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK--FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ R+ L LAL + K + PN + H + A V+ +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
Q + F T+I L + AV R+ Q + + ++N L +
Sbjct: 182 YQPNTVT-----FNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
DL ++ N + K+ P V +I LCK ++ A+ + EM + G+ PN+VT++
Sbjct: 237 TDLAFILL-NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ G +A R+ D+++R PD T++ L+D ++K G+L +A K+ DEM
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
++P+ VTY +I FC + EA+ + + M+ + P +I C+ +V++
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEG 415
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
EL++ + ++ + + +T+I L + G A+++F E G P+++TYNTL+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C++ +L +A +++ + +EP ++TYN++I+G CK G ++G + + KG P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSDLDSGAGA 518
+++ +I G G++ E + G++ S +N L+ + D D A A
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 192/383 (50%), Gaps = 37/383 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ + LL+A+ + ++D+V + + N +T +ILI
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGMPHNHYTYSILI 123
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G PN+VT +++L GY I A + + G+
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T+ L+ G + ++AV ++D M G +P+ VTYGV++ CK + A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFIL 243
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC- 371
L+ M Q K P + +ID LC+ ++DA L+K + K P+ S++I LC
Sbjct: 244 LNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 372 ----------------------------------KEGKIWEAKKLFDEFERGSI-PSLLT 396
KEGK+ EA+KL+DE + SI PS++T
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y++LI G C L EA ++++ MV K P+V +Y+ LI+GFCK EG+ + EM
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMS 423
Query: 457 DKGCFPNKTSFSLLIEGLYESGN 479
+G N +++ LI+GL+++G+
Sbjct: 424 QRGLVGNTVTYTTLIQGLFQAGD 446
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 180/410 (43%), Gaps = 54/410 (13%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L ++ + + +++D AL +F N TY S+I L +
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMET--KGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 99 SLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL+++ K NP++ F +I + G+ A K + + K ++ S+ + ++L
Sbjct: 312 RLLSDMIERKINPDVFT----FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 156 LNALVQNKRYDLVHLMFKN--SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+N + R D MF+ S+H F P+V + + LIK CK V+ + + EM
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCF---PDVVSYSTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G+V N VT+TT++ G GD + A+ +F +++ G P+ TY L+DG K G+L
Sbjct: 425 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ V + ++ + +EP TY +MIE CK
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKA------------------------------ 514
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
GKVED +L+ L K PD +T+I C++G EA LF E E G++P
Sbjct: 515 -----GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY----NMLIQG 438
+ YNTLI + + L +M G + T NML G
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG+++ P ++ L+ K+ + + + ++M++ G+ N TY +
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
+I FC+ K+ EA L+D M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P++ +I L K +A L R++ K C PD +++ LCK G A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L ++ E+G + P +L Y T+I G+C++ + +A L+ +M KG+ PNV TY+ LI
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ P+ +FS LI+ + G E K+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 127/269 (47%), Gaps = 10/269 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDA 96
P + L++ LD A Q+F + H P+ +Y ++I +A+ D
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV----SYSTLIKGFCKAKRVDE 414
Query: 97 VESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
L E+ Q + G + + T+I+ AG ++A + F + V ++ + NTL
Sbjct: 415 GMELFREMSQRGLV--GNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L+ L +N + + ++F+ + K+ P ++T NI+I+ +CK VE + + G
Sbjct: 473 LDGLCKNGKLEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++V + T++ G+ +G E A +F ++ + G +P++ Y L+ ++ G +
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ EM G + T G++ G+
Sbjct: 592 ELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLT 396
E K++DA L+ +++ P S ++ + K K L ++ + +P + T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+ LI C ++L A + M++ G EPN+ T + L+ G+C E + ++++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G PN +F+ LI GL+ E ++ A G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG 216
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 171/328 (52%), Gaps = 1/328 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P++ C LI+ CK A R+++ + G VP+++T+ ++ G G +A++
Sbjct: 116 IPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEK 175
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D++ RG P T+ +L++ + G L A+ V+++M +G PN ++Y ++ FC
Sbjct: 176 LLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFC 235
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K KK A L M R P ++ LC++GKV+ A EL +L K C P
Sbjct: 236 KEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLI 295
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T+I L K GK +A KL DE +G P ++TY++L+ G+ ++ EA + + D+
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDL 355
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
GV+PN TYN ++ G CK I L M+ +GC P + S+++LIEGL G
Sbjct: 356 EVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLA 415
Query: 481 GEVGKVVSMATASGSVESDSWNFLLTRI 508
E ++++ G V+ S + R+
Sbjct: 416 KEALELLNELCLRGVVKKSSAEKVAVRM 443
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 9/243 (3%)
Query: 148 SVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
SV + N L+N L + + D++ M K+ PN + N L+ CK+ +E
Sbjct: 188 SVVTFNILINFLCRKGLLGRAIDVLEKMPKHG-----CTPNSLSYNPLLHGFCKEKKMER 242
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
AI L +M S G P++VT+ T+L G ++ A + + +G P TY ++D
Sbjct: 243 AIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVID 302
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G K+G+ A K++DEM G++P+ +TY ++ + K EA D+ P
Sbjct: 303 GLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKP 362
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++ ++ LC+ K + A + ++++ C P A + +I L EG EA +L
Sbjct: 363 NAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422
Query: 384 DEF 386
+E
Sbjct: 423 NEL 425
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S+ + L + G++ E + + RG IP ++ +LI G C+ + +A R+ + +
Sbjct: 87 SNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIE 146
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+ G P+V TYN+LI G C G + ++L +M+ +GC P+ +F++LI L G G
Sbjct: 147 DSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLG 206
Query: 482 EVGKVVSMATASG-SVESDSWNFLL 505
V+ G + S S+N LL
Sbjct: 207 RAIDVLEKMPKHGCTPNSLSYNPLL 231
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 10/225 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSH-NYDTYHSIIHKLARARAFDAV 97
P L L+ +++ ++ A++ Y GK + + TY++++ L + DA
Sbjct: 222 PNSLSYNPLLHGFCKEKKMERAIE---YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAA 278
Query: 98 ESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL +L C L + TVI G+ + A K + ++ + + ++L
Sbjct: 279 VELLNQLSSK---GCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSL 335
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ L + + D + F + V PN T N ++ LCK + AI L M G
Sbjct: 336 VGGLSREGKVDEA-IKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRG 394
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
P ++T ++ G + G + A + ++ RG V ++ V
Sbjct: 395 CKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKV 439
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 233/500 (46%), Gaps = 14/500 (2%)
Query: 5 LHQKITAPSCLLQSIGGARCSLSTITV----TPPIKPWPQRLYPKRLVSMIFRQQNLDLA 60
L + S LL+ + A+ S + + P + P + +V + A
Sbjct: 150 LKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRA 209
Query: 61 LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLF 117
L + H K S N TY+++IH L R +L E+ Q P++ ++
Sbjct: 210 LDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSII 269
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+ + + + EL ++ + Q + + N +++ + ++ MF+
Sbjct: 270 DALCKARAM-DKAELVLRQMI---SNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTS 325
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ ++PN+ TCN + +LCK + A D M + G PNLVT++ +L GY G
Sbjct: 326 Q-GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFV 384
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+ +F + G V D + +++D Y K G + + + + +M++ GV P+ TYG++I
Sbjct: 385 DMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVI 444
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC- 356
AF + + +A + + M+ P + +I C G + A EL ++ +
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ ++II+ LCKEG++ EA +FD G P ++T+N+LI G ++ +A
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ D M+ G+EP+V +YN LI G+C+ G +G+ + EML KG P ++ +++ GL+
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624
Query: 476 ESGNEGEVGKVVSMATASGS 495
G K+ SG+
Sbjct: 625 NDGRTVGAKKMCHEMIESGT 644
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 172/369 (46%), Gaps = 3/369 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
RP + F R K ++ V + LL L KR D V + + + V P+ +
Sbjct: 134 RPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISY 193
Query: 189 NILIKALCKKDDVEGAIRVLDEM--PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N ++K LC+ + A+ +L M S G PN+VT+ T++ G G++ A +F ++
Sbjct: 194 NTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEM 253
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ +G VPD TYT ++D K + A V+ +M NG +PN+VTY MI + +
Sbjct: 254 MQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQW 313
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
E + +M + +P+ C + LC+ GK ++A E + + K P+ S +
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373
Query: 367 IHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+H EG + LF+ E G + +N +I + + E ++ M E+GV
Sbjct: 374 LHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGV 433
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+ TY ++I F ++G + + +M+ G P + LI+G GN + +
Sbjct: 434 IPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKE 493
Query: 486 VVSMATASG 494
+VS + G
Sbjct: 494 LVSEMMSRG 502
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 182/405 (44%), Gaps = 6/405 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++H A F + +L ++ N I + +F VI YG G + +
Sbjct: 366 NLVTYSVLLHGYATEGCFVDMLNLFNSMEGN-GIVADQRVFNIVIDAYGKRGMMDETMLI 424
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK-NSRHKFKVVPNVFTCNILIKAL 195
F ++++ V + ++ A + R L M K N + P + LI+
Sbjct: 425 FTQMQEQGVIPDACTYGIVIAAFSRMGR--LADAMDKFNQMIAMGLKPEGIVYHSLIQGF 482
Query: 196 CKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
C ++ A ++ EM S G+ PN+V +I+ G + A +F ++ G PD
Sbjct: 483 CMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPD 542
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+ L+DGY +G++ A V+D M G+EP+ V+Y +I+ +C+ + + L
Sbjct: 543 VITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFG 602
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ML + P++ ++ L +G+ A ++ ++ D + I+ LC+
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNN 662
Query: 375 KIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
EA +F + ++ ++ NT+I M + + EA L+D + G+ PN TY
Sbjct: 663 CDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYG 722
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++I+ K G+ +E + M GC P+ + +I L E G
Sbjct: 723 VMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKG 767
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 155/351 (44%), Gaps = 16/351 (4%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P V T NIL+ C+ + G+ +++ + +L + +AKR
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKC------LYHAKR 169
Query: 242 ---VFGDILDR----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM--EDNGVEPNEVT 292
V +L R G PD +Y ++ + R A+ ++ M + G PN VT
Sbjct: 170 SDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVT 229
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I + + +A NL +M+Q+ VP +ID LC+ ++ A + ++++
Sbjct: 230 YNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMI 289
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
P+ + +IH G+ E +F E +G +P+++T N+ ++ +C+ +
Sbjct: 290 SNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSK 349
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +D M KG +PN+ TY++L+ G+ G + + + M G ++ F+++I
Sbjct: 350 EAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVI 409
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDEL 522
+ + G E + + G + ++ S + A A+D+
Sbjct: 410 DAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKF 460
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 41/304 (13%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N+++N+L + R H +F H P+V T N LI +E A VLD M
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIH-IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM 569
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
S G+ P++V++ T++ GY G I++ +FG++L +G P TY +++ G GR
Sbjct: 570 ISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRT 629
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGV-----------------------------------M 296
A K+ EM ++G + T G+ M
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTM 689
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+A K +K EA+ L D + VP+++ +I L +EG VE+A ++ + + C
Sbjct: 690 IDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGC 749
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P + + + II L ++G+I +A + + I + +L+ + + G+
Sbjct: 750 APSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMAL-----FSREGKY 804
Query: 417 WDDM 420
W+D+
Sbjct: 805 WEDV 808
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 8/306 (2%)
Query: 81 YHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
++SII+ L + R +A + + + + P++ F ++I YGL G+ E A
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVIT----FNSLIDGYGLVGKIEKAFGVL 566
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ V S NTL++ +N R D ++F K V P T I++ L
Sbjct: 567 DAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSK-GVKPTTITYGIILHGLFN 625
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
GA ++ EM G ++ T ILGG + A +F + +
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAI 685
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
++D K+ + +A ++ D + G+ PN TYGVMI+ K EA N+ M
Sbjct: 686 INTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLME 745
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ PSS L +I +L E+G++ A ++ K + + S ++ +EGK W
Sbjct: 746 KSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYW 805
Query: 378 EAKKLF 383
E KL
Sbjct: 806 EDVKLL 811
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 1/296 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K + VP+ T N LI C + A+ + EM G+ PN+VT+TT++ G++
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + DRG P+ TYT L+DG+ + G L A ++M EM +NG P +TY +I
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
C + +A LL +M++R ++P +I C ++E A +L ++ K
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD A S++I LCK+ ++ E LF E G P +TY +LI C +L +A RL
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
D+M++KG P++ TYN+LI GF K KE R+L ++L + PN+ +++ LI+
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 197/373 (52%), Gaps = 10/373 (2%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNS 175
+IR + AG E+ + F +E+ +V + NT+++A + ++ + L+ LM
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ PN+ + N++I LC++ ++ +L+EM VP+ VT T++ GY G+
Sbjct: 269 LN-----PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A + +++ G P+ TYT L++ K G L A++ +D+M D G+ PN TY
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ F + +A ++ +M++ + P+ +I+ C G++EDA L + ++ +
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD STII C+ ++ +A +L E +G P + TY++LI G+C+ L E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ +M+ G+ P+ TY LI +C G+ + +R+ +EM+ KG P+ ++++LI G
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 475 YESGNEGEVGKVV 487
+ E +++
Sbjct: 564 NKQSRTKEAKRLL 576
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 170/313 (54%), Gaps = 16/313 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T LI ++CK ++ A+ LD+M G+ PN T+TT++ G+ +G ++ A ++
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++++ G+ P TY L++G+ LGR+ DA ++ EM + G P+ V+Y +I FC+
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR 460
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A L +M+ + P A +I LC++ ++ + C+L++ +L PD
Sbjct: 461 NQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVT 520
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I+ C EG + +A +L DE ++G P ++TYN LI G + + EA RL ++
Sbjct: 521 YTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Query: 422 EKGVEPNVFTYNMLI---------------QGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ PN TYN LI +GFC G E R+LE ML KG N+
Sbjct: 581 YEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV 640
Query: 467 FSLLIEGLYESGN 479
++++I G + GN
Sbjct: 641 YNVIIHGHSKVGN 653
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 208/418 (49%), Gaps = 20/418 (4%)
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNY----GLAGRPELAVKTFLRI 140
+H L R + + +SL E+ N + GE+LF + +Y + +L VK+ R+
Sbjct: 86 LHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARV 145
Query: 141 EKFNVQRS-------------VRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVF 186
N S V S N +L+A+++ K+ + +FK V PNV+
Sbjct: 146 NLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES-GVSPNVY 204
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NILI+ C ++E + EM G +PN+VT+ TI+ Y I A ++ +
Sbjct: 205 TYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM 264
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+G P+ +Y V+++G + G++ + ++++EM P+ VT+ +I +C
Sbjct: 265 ALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNF 324
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A L +M++ P+ +I+ +C+ G + A E ++ + P+ +T+
Sbjct: 325 HQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTL 384
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I ++G + +A ++ E E G P+++TYN LI G C + +A L +M+E+G
Sbjct: 385 IDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGF 444
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
P+V +Y+ +I GFC+ ++ ++ EM+ KG P+ ++S LI+GL + GEV
Sbjct: 445 IPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEV 502
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 176/357 (49%), Gaps = 42/357 (11%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
KNS ++ K VF ++++K+ + + + A+ +++ S G +P ++++ IL +
Sbjct: 121 LKNSYYQCKSSSAVF--DLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVI 178
Query: 232 -WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+ ++ A+ +F ++++ G P+ TY +L+ G+ G L + EME NG PN
Sbjct: 179 RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNV 238
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I+A+CK + K+ +A +L +
Sbjct: 239 VTYNTIIDAYCKLR-----------------------------------KIGEAFKLLRL 263
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ K P+ + +I+ LC+EG++ E ++ +E +R +P +T+NTLI G C
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+A L +MV+ G+ PNV TY LI CK GN + L++M D+G PN +++
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTR--IVSDLDSGAGALDELL 523
LI+G + G + +++ +G + ++N L+ I+ ++ +G L E++
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI---------------L 227
P++ T N+LI K+ + A R+L ++ VPN +T+ T+ +
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALM 610
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ +G + A RV +L +G+ + Y V++ G+ K+G + A + EM +G
Sbjct: 611 KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFA 670
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ VT + ++ K E LLD L+ + +AL +I + +EG ++ +
Sbjct: 671 PHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNV 730
Query: 348 WKRLLRKNCMP 358
K + +P
Sbjct: 731 LKDMALSGLLP 741
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 204/415 (49%), Gaps = 6/415 (1%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
YA + N T++ +I+ L + + L + ++ IK + T+++ Y
Sbjct: 214 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG-IMESFGIKPTIVTYNTLVQGYS 272
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
L GR E A ++ Q +++ N +L+ + R V K +VP+
Sbjct: 273 LRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKG----IGLVPDS 328
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+ NILI+ D+E A DEM GMVP T+ T++ G IE A+ + +
Sbjct: 329 VSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 388
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
I ++G V D+ TY ++++GY + G A + DEM +G++P + TY +I C+ K
Sbjct: 389 IREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNK 448
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ EA L + ++ + P + ++D C G ++ A L K + R N PD+ +
Sbjct: 449 TREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNC 508
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ LC EGK EA++L E +R I P ++YNTLI+G + + A + D+M+ G
Sbjct: 509 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLG 568
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
P + TYN L++G K + + +L EM +G PN +SF +IE + +S N
Sbjct: 569 FNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 190/370 (51%), Gaps = 10/370 (2%)
Query: 135 KTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K FL I E F ++ ++ + NTL+ R + ++ + K P++ T N ++
Sbjct: 246 KGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSK-GFQPDLQTYNPILS 304
Query: 194 ALCKKDDVEG-AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+C EG A VL EM +G+VP+ V++ ++ G GD+E A +++ +G V
Sbjct: 305 WMCN----EGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMV 360
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TY L+ G ++ A ++ E+ + G+ + VTY ++I +C+ + +A L
Sbjct: 361 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFAL 420
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
D+M+ P+ +I +LC K +A EL+++++ K PD + +T++ C
Sbjct: 421 HDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 480
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + A L E +R +I P +TYN L+ G+C + EA L +M +G++P+ +
Sbjct: 481 TGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 540
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG-KVVSMA 490
YN LI G+ K G+ K + +EML G P +++ L++GL +GE+ +++
Sbjct: 541 YNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGL-SKNQDGELAEELLREM 599
Query: 491 TASGSVESDS 500
+ G V +DS
Sbjct: 600 KSEGIVPNDS 609
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+ + M+ +C+ + EA M ++ + P + C ++ LL ++E+A +
Sbjct: 157 ILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYAD 216
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAE 409
+ R + + +I+ LCKEGK+ +AK E I P+++TYNTL+ G
Sbjct: 217 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A + +M KG +P++ TYN ++ C G A E +L EM G P+ S+++
Sbjct: 277 IEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNI 333
Query: 470 LIEGLYESGN 479
LI G +G+
Sbjct: 334 LIRGCSNNGD 343
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 209/437 (47%), Gaps = 39/437 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL-AVKTFL 138
TY++++ +A D +LL +++ ++ V+ N GLA + EL +
Sbjct: 231 TYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVIN-GLARKGELEKAAQLV 289
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
I + + + S + N L+ L+ + + ++ +VP V T N LI L K
Sbjct: 290 DIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENE-GIVPTVVTYNTLIDGLFKT 348
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ E A DEM + G++P+L+T+ +++ GY G+++ A +FGD+ G P TY
Sbjct: 349 GNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTY 408
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L+DGY +LG L A ++ +EM + P+ TY +++ C + R D+ML
Sbjct: 409 NILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLS 468
Query: 319 RKYVP------------------SSALCCK-----------------VIDLLCEEGKVED 343
+ P ++A + +ID LC+ G ++D
Sbjct: 469 KGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKD 528
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
A LW +++ D + +IH C+ G++ EAK +FD G PS++TY I
Sbjct: 529 AYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIH 588
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
C L A + M+E+GVEPN TYN+L+ C++G + + EML++G P
Sbjct: 589 TYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVP 648
Query: 463 NKTSFSLLIEGLYESGN 479
NK +++LLI+G + GN
Sbjct: 649 NKYTYTLLIDGSCKEGN 665
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 169/355 (47%), Gaps = 3/355 (0%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDD 200
+ V+ S+ + NTLL++ + R D + K+ + +PN T N++I L +K +
Sbjct: 222 QLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGE 281
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +++D M + + T+ ++ G + R +E A + ++ + G VP TY
Sbjct: 282 LEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNT 340
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+DG K G A DEM G+ P+ +TY +I +CK +A L D+ +
Sbjct: 341 LIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAG 400
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P+ +ID C G +E A L + + ++C+PD + +++ C + +
Sbjct: 401 LGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVR 460
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
FDE +G P YNT I+ +T A +L ++M+ +G+ + TYN+LI G
Sbjct: 461 IFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGL 520
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
CK G+ K+ + +M+ G + +++ LI E G E + ASG
Sbjct: 521 CKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASG 575
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 188/413 (45%), Gaps = 39/413 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I L + +LL E+ +N I + T+I G E A F
Sbjct: 302 TYNPLITGLLARDFVEKAGALLLEM-ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + N+L+N + +F + + + + P V T NILI C+
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLK-RAGLGPTVLTYNILIDGYCRLG 419
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGG----------------------------YV 231
D+EGA R+ +EM +P++ T+T ++ G Y
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYN 479
Query: 232 WR-------GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
R G I NA ++ +++ RG D TY VL+DG K G L DA + +M +
Sbjct: 480 TRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD 539
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ + VTY +I A C+ + EA+N+ D M+ PS I C G + A
Sbjct: 540 GLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLA 599
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAG 403
++++L + P+ + ++H LC+ G+ A + F E ERG +P+ TY LI G
Sbjct: 600 YGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDG 659
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
C+ A RL+ +M +KG+ P+ T+N L +GF + G+ + ++ LE ++
Sbjct: 660 SCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE-GHMYDAVQYLENVV 711
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 6/315 (1%)
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ EM G+ P + +L ++ + V+ D+L G P TY L+D
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238
Query: 265 YIKLGRLTDAVKVMDEMEDN--GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ K GR+ AV ++ +ME G PN+VTY V+I + + +A L+D M K
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA 298
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+ + LL + VE A L + + +P +T+I L K G A+
Sbjct: 299 SAFTYNPLITGLLARD-FVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVK 357
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
FDE +G +P L+TYN+LI G C++ L +A L+ D+ G+ P V TYN+LI G+C+
Sbjct: 358 FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCR 417
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
+G+ + R+ EEM ++ C P+ ++++L+ G N V ++ S +E D +
Sbjct: 418 LGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV-RIFFDEMLSKGLEPDCF 476
Query: 502 NFLLTRIVSDLDSGA 516
+ TRI ++L GA
Sbjct: 477 AY-NTRISAELTIGA 490
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 45/345 (13%)
Query: 175 SRHKFKVVPNVFTCNILIKAL---CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+RH V P V CN +++ L + DD+ V +M +G+ P++ T+ T+L +
Sbjct: 186 ARHG--VAPFVKECNCVLRVLRDAARWDDMRA---VYSDMLQLGVEPSIFTYNTLLDSFC 240
Query: 232 WRGDIENAKRVFGDILDR--GWVPDATTYTVLMDGYIKLGRLTDAVKVMD---------- 279
G ++ A + D+ R G +P+ TY V+++G + G L A +++D
Sbjct: 241 KAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASA 300
Query: 280 ------------------------EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
EME+ G+ P VTY +I+ K + A+ D+
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + +P +I+ C+ G ++ A L+ L R P + +I C+ G
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A++L +E E +P + TY L+ G C L +D+M+ KG+EP+ F YN
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I IG ++ EEM+ +G + ++++LI+GL ++G+
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ + T N+LI LCK ++ A + +M + G+ + VT+T ++ + RG + AK
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++ G P TYT+ + Y + G L A +M + GVEPNEVTY V++ A
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ ++ A +ML+R VP+ +ID C+EG A L+ + +K PD+
Sbjct: 626 CRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDH 685
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+ + EG +++A + + G+
Sbjct: 686 CTHNALFKGF-GEGHMYDAVQYLENVVLGT 714
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
T + EM +GV P ++ + + R + DMLQ PS +
Sbjct: 176 TQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTL 235
Query: 332 IDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+D C+ G+++ A L K + + C+P++ + +I+ L ++G++ +A +L D
Sbjct: 236 LDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLS 295
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
S TYN LI G+ + +AG L +M +G+ P V TYN LI G K GNA+
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+EM KG P+ +++ LI G ++GN
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGN 385
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 165/300 (55%), Gaps = 1/300 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ FTCNI+I LCK + L ++ G +P +T+ I+ G+V G + +A
Sbjct: 534 IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSAL 593
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V+ ++ G P+ TYT L++G+ K + A+KVMDEM++ G+E + Y +I+ F
Sbjct: 594 AVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGF 653
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ A LL ++ + P+ + +I + +E A L KR++ + D
Sbjct: 654 CRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDL 713
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
I +T+I L KEGK+ A +L+ E +G +P L+TY+ LI G+C +L A ++ +D
Sbjct: 714 QIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILED 773
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M K + P VF YN LI G K GN +E R+ EMLDKG P+ T++ +L+ G + GN
Sbjct: 774 MDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 229/504 (45%), Gaps = 44/504 (8%)
Query: 53 RQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
+Q +LD AL++F K + N N TY II + D + ++K N +I
Sbjct: 341 KQGDLDSALELFD---KMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMK-NKDIS 396
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
++IR Y A PE A K F + +V + N+LL+ L + + +
Sbjct: 397 PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSI 455
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
++ K V P+V + N +I C++ D++ A V EM G+ PNL+T++ ++ GY
Sbjct: 456 WEKMVRK-GVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514
Query: 232 WRGDIENA----KRVFGD-------------------------------ILDRGWVPDAT 256
+GD E A R+ G+ ++ G++P
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCM 574
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY ++DG++K G + A+ V EM GV PN TY +I FCK A ++D+M
Sbjct: 575 TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEM 634
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + C +ID C +G + +A +L L P+ + S++I K +
Sbjct: 635 KNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNM 694
Query: 377 WEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A L IP L Y TLI+G+ + +L A L+ +M+ KG+ P++ TY++L
Sbjct: 695 EAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVL 754
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G C G + +ILE+M K P ++ LI G ++ GN E ++ + G
Sbjct: 755 IHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814
Query: 496 VESD-SWNFLLTRIVSDLDSGAGA 518
V D +++ L+ V D + +GA
Sbjct: 815 VPDDTTYDILVNGKVKDGNLFSGA 838
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 225/487 (46%), Gaps = 54/487 (11%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P +P + P S + + Q +D L + P + +Y T+ S K ++
Sbjct: 45 PNTNFPGKSAPTSQDSFLTQTQYIDTLLN-----HQNDPQSALSYFTWAS--QKRGLIKS 97
Query: 94 FDAVESLLTELKQNPEIKCGE-----NLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQR 147
DA+ LL L ++ E CG+ N F + ++G P + V + + + +
Sbjct: 98 VDALCVLLHILTKSTET-CGKARNLLNRFAS--DDWGPV--PSVVVARLIESSRRLDFES 152
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
R N LLN+ V+ KR + F NS + +VP + NI + L K + + A V
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCF-NSLIEKDIVPCLTVMNIFLSELVKNNMIREARDV 211
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK---------------RVFGDIL----- 247
++M S G+ + T + ++ + G +E A+ R + ++
Sbjct: 212 YNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCK 271
Query: 248 ---------------DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
D+GWVP +T ++ +K G++ +AVKV EM G N V
Sbjct: 272 KPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVV 331
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+++ +CK A L D M + P++ +I+ C+ G ++ A E++ ++
Sbjct: 332 ATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMK 391
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTE 412
K+ P +++I K EA KLFDE I ++ TYN+L++ +C+ +++E
Sbjct: 392 NKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSE 451
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A +W+ MV KGV P+V +YN +I G C+ G+ + EML+KG PN ++S+L++
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD 511
Query: 473 GLYESGN 479
G ++ G+
Sbjct: 512 GYFKKGD 518
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 38/341 (11%)
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ L+ + R F+ VF N L+ + K + A+ + + +VP L
Sbjct: 138 VARLIESSRRLDFESDSRVF--NYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIF 195
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
L V I A+ V+ + +G D T +V++ ++ G+L +A E ++ GV
Sbjct: 196 LSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGV 255
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
E + Y ++IEA CK S A LL +M + +VP + +VI +
Sbjct: 256 ELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGV------------ 303
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMC 405
CM K+GK+ EA K+ E P +++ TL+ G C
Sbjct: 304 ---------CM--------------KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYC 340
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ +L A L+D M E G+ PN TY ++I+ CK GN + I +M +K P
Sbjct: 341 KQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVF 400
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
+ + LI G ++ + E K+ A A G ++N LL+
Sbjct: 401 NVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLS 441
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 224/497 (45%), Gaps = 54/497 (10%)
Query: 26 LSTITVTPPIKPWPQRLY----------PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
+S IT T P W Q L P L + Q+N ++L+ FH+ FS
Sbjct: 101 VSDITRTRP--RWEQTLLSDFPSFNFLDPTFLSHFVEHQKNALISLRFFHWLSS-QSGFS 157
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
+ + + + L A A +A +S L NP+ E IR G E A+
Sbjct: 158 PDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPASLE----AYIRCLCKGGLVEEAIS 213
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F +++ V S+ + N++L V+ R D V ++ VV +V T L++A
Sbjct: 214 VFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVES-SVVADVHTVGYLVQAF 272
Query: 196 CKKDDV------------EGAI--------------------RVLDEMPSM---GMVPNL 220
C ++ + +G + RV D + SM P++
Sbjct: 273 CDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDI 332
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T+ ++ G G RVF D+ DRG+ PD YT ++ G ++ L DA K+ E
Sbjct: 333 FTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFE 392
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G PNE TY MI + K EA + +M + Y + +I LC GK
Sbjct: 393 MIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGK 452
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE-AKKLFDEFERGSIPSLLTYNT 399
+++A +L++ + K + ++ + ++ CKEGKI E A L++ ++G PS +Y
Sbjct: 453 IKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAP 512
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI +C+ ++ A LWDDM +G+EP V T++ +I GFCK G A EG+ L ML
Sbjct: 513 LIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSK 572
Query: 460 CFPNKTSFSLLIEGLYE 476
P K SF LI+ L +
Sbjct: 573 LRPQKKSFESLIQCLSQ 589
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 164/329 (49%), Gaps = 5/329 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N L +ALV+ + ++ P + I+ LCK VE AI V +
Sbjct: 162 SCNVLFDALVEAGACNAAKSFLDSTNFN----PKPASLEAYIRCLCKGGLVEEAISVFGQ 217
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ +G+ ++ T ++L G V G I+ ++G++++ V D T L+ + R
Sbjct: 218 LKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENR 277
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
++D ++ + ++GV P + +I FCK K G +LL M+ R P +
Sbjct: 278 ISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQE 337
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL-FDEFERG 389
V++ LC+ GK + ++K L + PD + +T+IH LC+ + +A+KL F+ ++G
Sbjct: 338 VVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKG 397
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+P+ TYN +I G + L EA +++ +M +KG +YN++I+G C G KE
Sbjct: 398 FLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAH 457
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ EEM KG N +++ L+ G + G
Sbjct: 458 DLFEEMSHKGILRNHITYNALVRGFCKEG 486
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 158/317 (49%), Gaps = 16/317 (5%)
Query: 151 SLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ N L++ ++K Y DL+H M +R P++FT ++ LCK R
Sbjct: 299 AFNKLISGFCKDKAYGRVSDLLHSMIARNR-----APDIFTYQEVVNGLCKGGKGPEGFR 353
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYV---WRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
V ++ G P+ V +TT++ G W GD A++++ +++ +G++P+ TY ++
Sbjct: 354 VFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGD---ARKLWFEMIQKGFLPNEYTYNAMIH 410
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K+G L +A K+ EM D G V+Y VMI+ C K EA +L ++M + +
Sbjct: 411 GYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILR 470
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ ++ C+EGK+ + L LL + P A + +I LC+EG + AK L+
Sbjct: 471 NHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILW 530
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
D+ + RG P++ T++ +I G C+ E M+ + P ++ LIQ +I
Sbjct: 531 DDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQI 590
Query: 443 GNAKEGIRILEEMLDKG 459
+ + +L+ ML G
Sbjct: 591 DRLDDALLVLDSMLKIG 607
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 152/362 (41%), Gaps = 45/362 (12%)
Query: 154 TLLNALVQNKRYDLVHLMFKN---SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
T L+ V++++ L+ L F + S+ F P+ +CN+L AL + A LD
Sbjct: 128 TFLSHFVEHQKNALISLRFFHWLSSQSGFS--PDSSSCNVLFDALVEAGACNAAKSFLD- 184
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
S P + + G +E A VFG + G T+ ++ G ++ GR
Sbjct: 185 --STNFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGR 242
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ ++ EM ++ V + T G +++AFC
Sbjct: 243 IDFVWELYGEMVESSVVADVHTVGYLVQAFC----------------------------- 273
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
+E ++ D L +R+L +P NA + +I CK+ L R
Sbjct: 274 ------DENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARN 327
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + TY ++ G+C+ + E R++ D+ ++G P+ Y +I G C++ +
Sbjct: 328 RAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDAR 387
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRI 508
++ EM+ KG PN+ +++ +I G ++ GN E K+ G E S+N ++ +
Sbjct: 388 KLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGL 447
Query: 509 VS 510
S
Sbjct: 448 CS 449
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 95/188 (50%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N++IK LC ++ A + +EM G++ N +T+ ++ G+ G I + ++LD
Sbjct: 441 NVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLD 500
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G P A +Y L+D + G + +A + D+M++ G+EP T+ MI FCK + E
Sbjct: 501 QGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAME 560
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
L ML+ K P +I L + +++DA + +L+ +I ++++
Sbjct: 561 GMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVT 620
Query: 369 WLCKEGKI 376
LC++ +
Sbjct: 621 KLCEKNSL 628
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 120/261 (45%), Gaps = 2/261 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y ++IH L R + L E+ Q + E + +I Y G E A K + +
Sbjct: 370 YTTMIHGLCRMKWLGDARKLWFEMIQKGFLP-NEYTYNAMIHGYFKIGNLEEAWKMYREM 428
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
S N ++ L + + H +F+ HK ++ N T N L++ CK+
Sbjct: 429 CDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHK-GILRNHITYNALVRGFCKEGK 487
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ +L E+ G+ P+ ++ ++ GD++NAK ++ D+ +RG P T+
Sbjct: 488 IVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDF 547
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G+ K G + ++ + M + + P + ++ +I+ + + +A +LD ML+
Sbjct: 548 MITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIG 607
Query: 321 YVPSSALCCKVIDLLCEEGKV 341
+ S ++C ++ LCE+ +
Sbjct: 608 FRLSISICNSLVTKLCEKNSL 628
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 235/488 (48%), Gaps = 24/488 (4%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF---DAV 97
+L P +V+++ +N D L+ F + + F H+ + S++++L R R F D V
Sbjct: 75 KLKPHHVVNILQTHKNTDSVLRFFFWISR-RKFFKHDMSCFVSMLNRLVRDRLFAPADHV 133
Query: 98 ESLLT-------ELKQ--------NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRI 140
L+ E+K+ N + G L F T++ G +LA ++++
Sbjct: 134 RILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKM 193
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
++ S+ + NT++N L + R L+ + ++ PN FT LI C+ +
Sbjct: 194 LNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI-FRYDAYPNAFTYTSLILGHCRNHN 252
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A + D M G PN VT++T++ G G +E A + +++ +G P TYT+
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+ G ++AV+++ +M+ G PN T+ +I + K A L ML
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP++ +I+ LC EG+ E A ++K +L +P + II C G I +A
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+FD+ + GS P+++TYNTLI G C+ L A RL + M G++P+ +TY LI GF
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ES 498
+ G + + M++ G PN +++ +I+G + + + SG++ S
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 499 DSWNFLLT 506
++N +++
Sbjct: 553 QTYNVMIS 560
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 187/383 (48%), Gaps = 7/383 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T+ ++I L+R F+ L ++ + + + +I + GR E A
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT-YNALINQLCVEGRFETAFTI 399
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + S ++ N ++ ++F + K PNV T N LI C
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF-DKMLKAGSSPNVITYNTLIYGYC 458
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A+R+L+ M G+ P+ T+T ++ G+ G +E+A +F +++ G P+
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT ++DGY L ++ DA+ + +M ++G P+ TY VMI F K EA N M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P+ ID LC G+ A +++ + ++N P+ S++I+ LC+EG+
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638
Query: 377 WEAKKLFDEFER----GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+A ++++ R G P++ TY TL+ G+C EA +L M +KG++P+ Y
Sbjct: 639 EDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 433 NMLIQGFCKIGNAKEGIRILEEM 455
L+ G CK + + I M
Sbjct: 698 RALLIGECKNLKVESALNIFYSM 720
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 244/530 (46%), Gaps = 27/530 (5%)
Query: 1 MLRHLHQKITAPSCL-----LQSIGGARCSLSTITVTPPIKPW---PQRLYPKRLVSMIF 52
ML + QK P+ L S+ A CS + + +K P L+S +
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLS 353
Query: 53 RQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
R ++A+ ++H A P TY+++I++L F+ ++ + + +
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTV----TYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYD 166
+ + +I+ + L G + A+ F ++ K +V + NTL+ + N
Sbjct: 410 PSTQT-YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
L+ +M N + P+ +T LI + +E A + M G+ PN VT+T I
Sbjct: 469 LLEIMKGNG-----LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ GY +++A +F +++ G +P + TY V++ G+ K +++A +M G+
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGL 583
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA-- 344
PN +TY I+ C+ ++G A + +M +R Y P+ +I LC+EG+ EDA
Sbjct: 584 LPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEM 643
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
L RL C P+ +T++ LC EG+ +EA +L ++ G PS Y L+ G
Sbjct: 644 YNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C++ ++ A ++ M G + ++ Y LI CK +E I + ML+K +
Sbjct: 704 ECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLD 513
+ ++++L++GL + G K++ + + + +L R +S LD
Sbjct: 764 EVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 186/409 (45%), Gaps = 15/409 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY S+I R D ++ + ++ C N + T+I GR E A+
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKD---GCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 135 KTFLRIEKFNVQRSVRS----LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + ++ +V + L +L +A ++ +L+ M K VPN+ T
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG-----CVPNIQTFTA 347
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI L + E AI + +M + G+VP VT+ ++ G E A +F +L G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+P TY ++ + +G + A+ + D+M G PN +TY +I +CK A
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL+ M P + ++I GK+E A L+ ++ P++ + II
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527
Query: 371 CKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K+ +A LF E G++PS TYN +I+G ++ ++EA MV++G+ PNV
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNV 587
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
TY I G C+ G +I EM + FPN ++S LI GL + G
Sbjct: 588 ITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 196/372 (52%), Gaps = 4/372 (1%)
Query: 104 LKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++ PE+ N+ + VI GR A L +E V S +T++N +
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
D V + + + K + PN +T +I LC+ + A EM G++P+ +
Sbjct: 717 FGELDKVWKLIEKMKQK-GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+TT++ G+ RGDI A + F ++ R PD TYT ++ G+ ++G + +A K+ EM
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G+EP+ +T+ ++ +CK +A + + M+Q P+ +ID LC+EG +
Sbjct: 836 LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTL 400
+ A EL + + P+ ++I++ LCK G I EA KL EFE + + +TY TL
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ C+S E+ +A + +M+ KG++P + T+N+L+ GFC G ++G ++L ML KG
Sbjct: 956 MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015
Query: 461 FPNKTSFSLLIE 472
PN T+F+ L++
Sbjct: 1016 APNATTFNCLVK 1027
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 217/468 (46%), Gaps = 32/468 (6%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
+KP+ + L+ ++ + + + L L F +A N ++ +IH ++
Sbjct: 501 LKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA---RSRRDSNLESLCIVIHLAVASKD 557
Query: 94 FDAVESLLTELKQNPEIKCGENL---FITVIRNYGLAGRPELAVKTFLRI--EKFNVQRS 148
+SL++ + P++ E+ F ++ Y G F ++ E + +
Sbjct: 558 LKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEA 617
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK-DDVEGAIRV 207
+ +LN + +V +V +CN+ + L K + AI V
Sbjct: 618 RKVFEKMLN---------------------YGLVLSVDSCNVYLARLSKDCNKTATAIIV 656
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
E P +G+ N+ ++ ++ G I A + + +G+ PD +Y+ +++GY +
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G L K++++M+ G++PN TYG +I C+ K EA +M+ + +P + +
Sbjct: 717 FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++D C+ G + A + + + ++ PD + II C+ G + EA KLF E
Sbjct: 777 YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836
Query: 388 -RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
RG P ++T+ L+ G C++ + +A R+ + M++ G PNV TY LI G CK G+
Sbjct: 837 CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L EM G PN +++ ++ GL +SGN E K+V A+G
Sbjct: 897 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 168/325 (51%), Gaps = 9/325 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+ L+ CK+ D+ A + EM S + P+++T+T I+ G+ GD+ A
Sbjct: 770 ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 829
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F ++L RG PD T+T LM+GY K G + DA +V + M G PN VTY +I+
Sbjct: 830 KLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK A LL +M + P+ +++ LC+ G +E+A +L D
Sbjct: 890 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T++ CK G++ +A+++ E +G P+++T+N L+ G C L + +L +
Sbjct: 950 VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ KG+ PN T+N L++ +C N K I ++M +G P+ ++ L++G + N
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069
Query: 480 EGEV--------GKVVSMATASGSV 496
E GK S++ ++ SV
Sbjct: 1070 MKEAWFLFQEMKGKGFSVSVSTYSV 1094
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 199/421 (47%), Gaps = 23/421 (5%)
Query: 92 RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA-----------------GRPELAV 134
R FD +L E PE + +F ++ NYGL + A+
Sbjct: 599 RVFDVFFQVLVEFGMLPEAR---KVFEKML-NYGLVLSVDSCNVYLARLSKDCNKTATAI 654
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F + V +V S N +++ + Q R + H + K P+V + + +I
Sbjct: 655 IVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELK-GYTPDVISYSTVING 713
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
C+ +++ +++++M G+ PN T+ +I+G + A+ F +++ +G +PD
Sbjct: 714 YCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPD 773
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
YT L+DG+ K G + A K EM + P+ +TY +I FC+ EA L
Sbjct: 774 TIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 833
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ML R P ++++ C+ G ++DA + +++ C P+ +T+I LCKEG
Sbjct: 834 EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 375 KIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ A +L E + G P++ TYN+++ G+C+S + EA +L + G+ + TY
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
L+ +CK G + IL EML KG P +F++L+ G G + K+++ A
Sbjct: 954 TLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1013
Query: 494 G 494
G
Sbjct: 1014 G 1014
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 185/405 (45%), Gaps = 11/405 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY SII L R E +E+ I ++ T++ + G A K
Sbjct: 738 NSYTYGSIIGLLCRICKLAEAEEAFSEMIGQ-GILPDTIVYTTLVDGFCKRGDIRAASKF 796
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
F + ++ V + +++ Q + L H M + P++ T L+
Sbjct: 797 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG-----LEPDIITFTELM 851
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK ++ A RV + M G PN+VT+TT++ G GD+++A + ++ G
Sbjct: 852 NGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +++G K G + +AVK++ E E G+ + VTY +++A+CK + +A+ +
Sbjct: 912 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +ML + P+ +++ C G +ED +L +L K P+ + ++ C
Sbjct: 972 LTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCI 1031
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ A ++ D RG P TY L+ G C + + EA L+ +M KG +V T
Sbjct: 1032 RNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVST 1091
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
Y++LI+GF K E I ++M G +K F + Y+
Sbjct: 1092 YSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYK 1136
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + ++ +LD A ++ H K N TY+SI++ L ++ + L+ E +
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKI--GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-E 941
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + T++ Y +G + A + + +Q ++ + N L+N
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFC------ 995
Query: 167 LVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+H M ++ + PN T N L+K C +++++ A + +M S G+ P+
Sbjct: 996 -LHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T+ ++ G+ +++ A +F ++ +G+ +TY+VL+ G+ K + +A ++ D+
Sbjct: 1055 KTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
M +G+ ++ + + KGK+ + +D++++ V
Sbjct: 1115 MRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1156
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 206/395 (52%), Gaps = 5/395 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ N + S L L ++ + K+Y V + N F V N +T NILI
Sbjct: 70 AMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTV-VSLCNQMDLFGVAHNDYTLNILI 128
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+LC+ + A+ VL +M +G+ P+ VT TT++ G G I+ A +F ++ R +
Sbjct: 129 NSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM 188
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T+T+L+D K G +++A V + M + GVEPN TY ++ +C + +A +
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M+ + PS +I+ C+ ++++A L ++ K +P+ +T++ LC
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ EA++LF + G +P+L TY+ L+ G+C+ L EA +L M E+ +EP++
Sbjct: 309 ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVL 368
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN+LIQG G + + ++ G P+ +++++I+GL + G E K+
Sbjct: 369 YNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKME 428
Query: 492 ASGSV-ESDSWNFLLTRIVSDLDSGAGA--LDELL 523
G + +S S+N ++ + + D +DE++
Sbjct: 429 DDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMV 463
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 176/343 (51%), Gaps = 2/343 (0%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
AV ++ K +Q + TL+N L R +F N +PN T I
Sbjct: 138 HFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF-NEMAGRDAMPNTVTFTI 196
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ LCKK V A V + M G+ PN+ T+ ++ GY R ++ +A +VF ++ +G
Sbjct: 197 LVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG 256
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P +Y++L++GY K R+ +A ++ +M + + PN VTY +++ C EA+
Sbjct: 257 CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQ 316
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L M +P+ ++D LC+ G +E+A +L + + PD + + +I +
Sbjct: 317 ELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGM 376
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
GK+ AK+LF + F G PS+ TYN +I G+ + EA +L+ M + G P+
Sbjct: 377 FIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDS 436
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+YN++IQGF + + I++++EM+ + + ++F +L++
Sbjct: 437 CSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++PN+ T +IL+ LCK +E A+++L M + P++V + ++ G G +E AK
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAK 386
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + G P TY +++ G +K G +A K+ +MED+G P+ +Y V+I+ F
Sbjct: 387 ELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGF 446
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ + A L+D+M+ R++ S+ ++DL E E+ R +R++
Sbjct: 447 LQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL-------ESHDEIISRFMRES 494
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 114/219 (52%), Gaps = 2/219 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y +I+ ++R D ++LLT++ + E+ + T+++ A A + F +
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQMSEK-ELIPNTVTYNTLMQGLCHASSLLEAQELFKK 321
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + ++R+ + LL+ L ++ + L S + K+ P++ NILI+ +
Sbjct: 322 MCSSGMLPNLRTYSILLDGLCKHGHLEEA-LKLLTSMQERKLEPDIVLYNILIQGMFIAG 380
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A + ++ + G+ P++ T+ ++ G + G + A ++F + D G++PD+ +Y
Sbjct: 381 KLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYN 440
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
V++ G+++ + A++++DEM + T+ ++++
Sbjct: 441 VIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 195/372 (52%), Gaps = 3/372 (0%)
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+F R+ + + + + LL A+V+ Y +F + H + P++ T ILI
Sbjct: 42 SFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLF-SQLHSKGITPSIATLTILINCY 100
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C + + A +L + MG PN+VT T++ G+ G + A D++ +G+ D
Sbjct: 101 CHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDE 160
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+Y L++G K G+ DA++++ +ME++ V PN +TY +I+ CK + +A L
Sbjct: 161 FSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSL 220
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ R + +I C G+ +A L ++R N PD+ + ++ LCKEG+
Sbjct: 221 VTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGR 280
Query: 376 IWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
I EA+ +F +RG P ++TYN L+ G C S ++EA L++ MV++G+EP+V YN+
Sbjct: 281 IVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNV 340
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATAS 493
LI G+CKI E + + +E+ K PN +++ LI+GL + G V ++V M
Sbjct: 341 LINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400
Query: 494 GSVESDSWNFLL 505
S + ++N L
Sbjct: 401 QSPDIVTYNIFL 412
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 206/488 (42%), Gaps = 45/488 (9%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P P +L+ I R + A+ +F ++ P+ + + H+ + AF
Sbjct: 51 PPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAF 110
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+ ++L ++ P + F T+I + + G A+ L + S +
Sbjct: 111 SLLGTIL-KMGFQPNMVT----FNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGS 165
Query: 155 LLNALVQN-KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L+N L +N + D + L+ K + PN+ T + +I LCK + A+R+ + S
Sbjct: 166 LINGLCKNGQTRDALQLLQKMEEDLVR--PNLITYSTVIDGLCKDRLIADALRLFSLVTS 223
Query: 214 MGMVPNLVTHTTILGGYV----WR-------------------------------GDIEN 238
G++ ++V + +++ G WR G I
Sbjct: 224 RGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVE 283
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ VF ++ RG PD TY LM+G+ +++A ++ + M G+EP+ + Y V+I
Sbjct: 284 AQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLIN 343
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK EA L ++ + VP+ A +ID LC+ G++ EL + + P
Sbjct: 344 GYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSP 403
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
D + + CK +A LF + +G P Y+ ++ C+ +L A
Sbjct: 404 DIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQ 463
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ G PNV TY ++I CK + E + +L +M D C P+ +F +I L E
Sbjct: 464 HLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERN 523
Query: 479 NEGEVGKV 486
+ K+
Sbjct: 524 ETDKAEKL 531
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 172/355 (48%), Gaps = 14/355 (3%)
Query: 77 NYDTYHSIIHKLARARAF-DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N TY ++I L + R DA+ L L + I + ++I G+ A +
Sbjct: 194 NLITYSTVIDGLCKDRLIADALR--LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATR 251
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNIL 191
+ + N+ + N L++AL + R + +M K P++ T N L
Sbjct: 252 LLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEK-----PDIVTYNAL 306
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ C ++V A + + M G+ P+++ + ++ GY ++ A +F +I +
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VP+ TY L+DG KLGR++ +++DEM D G P+ VTY + ++AFCK K +A +
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L ++Q + P + +++ C+ K++ A E + LL C P+ + +I+ LC
Sbjct: 427 LFRQIVQGIW-PDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485
Query: 372 KEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
K+ EA L + + P +T+ T+I + E E +A +L +M+E+G+
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ +T NIL+ ALCK+ + A V M G P++VT+ ++ G+ ++ A+ +
Sbjct: 263 PDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAREL 322
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ RG PD Y VL++GY K+ + +A+ + E+ + PN TY +I+ CK
Sbjct: 323 FNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ + L+D+M R P +D C+ E A L+++++ + PD +
Sbjct: 383 LGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYM 441
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
I+ CK K+ A++ G P++ TY +I +C+ EA L M
Sbjct: 442 YDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMD 501
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ P+ T+ +I + + ++ EM+++G
Sbjct: 502 DNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERG 539
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 7/294 (2%)
Query: 68 GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA 127
G +P+ + ++ + K R V +++ + + P+I + ++ + L+
Sbjct: 259 GNINPD-DYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVT----YNALMEGFCLS 313
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
A + F R+ K ++ V + N L+N + D ++FK R K +VPN+ T
Sbjct: 314 NNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCK-NLVPNLAT 372
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI LCK + ++DEM G P++VT+ L + E A +F I+
Sbjct: 373 YNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
W PD Y V+++ + K +L A + + + +G PN TY +MI A CK
Sbjct: 433 QGIW-PDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
EA LL M P + +I L E + + A +L ++ + + D A
Sbjct: 492 EAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEA 545
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 200/401 (49%), Gaps = 11/401 (2%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY+ ++ +RA R DA+E L +L + K + T+I+ A R E A K F
Sbjct: 301 TYNILVAGFSRANRLDDALE--LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA-KAF- 356
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
F+ V S T++ L +KR D +F+ + PNV +I L K
Sbjct: 357 ----FDEALDVISYTTVIKGLADSKRIDEACELFEKLKTA-GCSPNVVAYTAVIDGLLKA 411
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E ++ ++M VP T+T ++ G + +A +VF ++ +G VPD TY
Sbjct: 412 GRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
T L+DG+ K ++ +A K++D M G EP VTYG ++ FCK EA+ ++ M +
Sbjct: 472 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 531
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R P + ++ +G+ E+A ++ + + C PD + +++I L G++ E
Sbjct: 532 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 591
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ +FD E+G P LTY T+I + + AG + + M + GV P+ F YN L+
Sbjct: 592 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 651
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G+ K+ + + + M+ G PN +F++L+ GL++ G
Sbjct: 652 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 692
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 218/454 (48%), Gaps = 18/454 (3%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+S++ + R D ++ LL E P+I+ + ++ + A R + A++
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ----TYNILVAGFSRANRLDDALEL 321
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + + + T++ L +R + ++ F +V + +IK L
Sbjct: 322 FKLLSSYGCKPNAATYTTIIQGLYDAQR-------MEEAKAFFDEALDVISYTTVIKGLA 374
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ A + +++ + G PN+V +T ++ G + G IE+ + F D+ VP T
Sbjct: 375 DSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRT 434
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYTV++DG K L DA KV ++M G P+ +TY +I+ F K K EAR LLD M
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 494
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L + P++ ++ C+ + +A E+ ++ + C P I ++++ + +G+
Sbjct: 495 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 554
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA ++ E RG P ++ Y +LI + + + EA ++D M+EKG P+ TY +
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG- 494
IQ F KIGN + ILE M G P+ +++ L++G + + V ASG
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674
Query: 495 SVESDSWNFLLTRIVSD--LDSGAGALDELLVKN 526
+ ++N L+ + D D E+L K+
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 165/299 (55%), Gaps = 2/299 (0%)
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H ++P+V CNI++ LCK ++ AI + EMPSMG P +V++ T++ G +
Sbjct: 12 HTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKM 71
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A + F ++D G PD +T L+ G+ K G+ ++++ P+ Y +
Sbjct: 72 DEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSV 130
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I +CK +L++ML +P +A +ID LC+ G+V++A EL++R+ + C
Sbjct: 131 IHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGC 190
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+ D T+I L GK+ EA +L+ E ERG P L ++LI +C++ ++ EA
Sbjct: 191 LGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANE 250
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ +V K V + YN L+ G+CK+G +G+++L +M++ FP+ ++++L+ G
Sbjct: 251 IYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF 309
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 212/483 (43%), Gaps = 50/483 (10%)
Query: 84 IIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIE 141
+++ L +AR D L E+ P + C + + TVI + + A K F +
Sbjct: 26 VLNGLCKARKIDKAIELFLEM---PSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMI 82
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+ V + TL++ + + + H++ + +F+ P+VF +I CK D+
Sbjct: 83 DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR--PDVFLYTSVIHGYCKAGDL 140
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ ++L+EM + G +P+ + ++ G ++ A +F + G + D T+ L
Sbjct: 141 DTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTL 200
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++ G+L +A ++ EM + G EP +I A CK K EA + ++ +K
Sbjct: 201 IEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKV 260
Query: 322 VPSSALCCKVIDLLCEEGKVED-----------------------------------ACE 346
S ++D C+ G+V+D A E
Sbjct: 261 ATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALE 320
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE 406
L+K L C P+ A +TII L ++ EAK FDE +++Y T+I G+ +
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE-----ALDVISYTTVIKGLAD 375
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
S + EA L++ + G PNV Y +I G K G ++G++ E+M C P +T+
Sbjct: 376 SKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTT 435
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRI--VSDLDSGAGALDELL 523
++++I+GL ++ + KV G V ++ ++ L+ S +D LD +L
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 495
Query: 524 VKN 526
K
Sbjct: 496 TKG 498
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 203/444 (45%), Gaps = 32/444 (7%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y S+IH +A D +L E+ I F+ +I GR + A + F R+
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFV-LIDPLCKLGRVDEAYELFERM 185
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
K + TL+ AL + + D +++ + P + + LI ALCK
Sbjct: 186 RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIER-GYEPYLEVQDSLIFALCKAGK 244
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A + + + + + V + +++ GY G +++ ++ +++ PD TY +
Sbjct: 245 VDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-- 318
L+ G+ + RL DA+++ + G +PN TY +I+ ++ EA+ D+ L
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVI 364
Query: 319 -----------RKYV----------------PSSALCCKVIDLLCEEGKVEDACELWKRL 351
K + P+ VID L + G++ED + ++ +
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
+C+P + +I LCK + +A K+F++ ++G +P +TY TLI G +++++
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA +L D M+ KG EP TY ++ GFCK+ E ++ +M ++GC P F+ L
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544
Query: 471 IEGLYESGNEGEVGKVVSMATASG 494
+ G E +V++ TA G
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARG 568
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 158/298 (53%), Gaps = 2/298 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P +F L+ K E A +VL EM + G P+++ +T+++ G + A+ V
Sbjct: 536 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 595
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++++G PDA TY ++ + K+G + A ++++ M +GV P+ Y +++ + K
Sbjct: 596 FDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK 655
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A + D M+ P++ ++ L ++GK + A L+K +L K+ +P +
Sbjct: 656 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLV 715
Query: 363 SSTI-IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S TI I L K G++ EA F E +RG IP TY +LI + ++ + EA +L +DM
Sbjct: 716 SYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 775
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
V+ GV P+V Y+ LI G + +EM+ +GC PN+ ++ +L G +G
Sbjct: 776 VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%)
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A+ + EM G+ P+ V +++ CK +K +A L +M P+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
VI L K+++A + + ++ C PD +T+IH CK G+ L ++ +
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P + Y ++I G C++ +L ++ ++M+ G P+ Y +LI CK+G E
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ E M GC + +F LIE L G E
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDE 212
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ ++F + A +F + + TY +II ++ +A
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFD--SMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+L + ++ G + F +++ Y R + A + R+ ++ + + N L+
Sbjct: 629 EILELMAKS---GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L ++ + D +FK K +V P + + ILI L K V A EM G+
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+P T+T+++ G I AK++ D++ G PD Y+ L+ G I + A
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 805
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
V EM G PNEVTY V+ F + +G A +L
Sbjct: 806 VFQEMMKRGCAPNEVTYKVLRRGF---RAAGRALDL 838
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +P ++ N ++ G+C++ ++ +A L+ +M G EP + +YN +I G I E
Sbjct: 15 GLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEA 74
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRI 508
+ M+D GC P+ +F+ LI G ++G + +VG ++ + A D FL T +
Sbjct: 75 YKFFNSMIDNGCEPDVIAFTTLIHGFCKAG-QPQVGHML-LNQALKRFRPDV--FLYTSV 130
Query: 509 V------SDLDSGAGALDELLVKNC 527
+ DLD+G L+E+L C
Sbjct: 131 IHGYCKAGDLDTGFKILEEMLAAGC 155
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 196/402 (48%), Gaps = 11/402 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTE-LKQ-NPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
+ ++IH +A LL + LK+ P++ L+ +VI Y AG + +
Sbjct: 45 FTTLIHGFCKAGQPQVGHKLLNQALKRFRPDV----FLYTSVIHGYCKAGDLDTG---YF 97
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
R V S T++ L +KR D +F+ + PNV +I L K
Sbjct: 98 RAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTA-GCSPNVVAYTAVIDGLLKA 156
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E ++ +EM VP T+T ++ G + +A +VF ++ +G VPD TY
Sbjct: 157 GRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 216
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
T L+DG+ K ++ +A K++D M G EP VTYG ++ FCK EA+ ++ M +
Sbjct: 217 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 276
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R P + ++ +G+ E+A ++ + + C PD + +++I L G++ E
Sbjct: 277 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 336
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ +FD E+G P LTY T+I + + AG + + M + GV P+ F YN L+
Sbjct: 337 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 396
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G+ K+ + + + M+ G PN +F++L+ GL++ G
Sbjct: 397 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 438
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 195/400 (48%), Gaps = 17/400 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y+++I LA D + N P++ F T+I + AG+P++ K
Sbjct: 9 SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIA----FTTLIHGFCKAGQPQVGHKL 64
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQN--KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ K R L +++ K DL F+ K + +V + +IK
Sbjct: 65 LNQALK-----RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL--DVISYTTVIKG 117
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L ++ A + +E+ + G PN+V +T ++ G + G IE+ + F ++ VP
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TTYTV++DG K L DA KV ++M G P+ +TY +I+ F K K EAR LLD
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
ML + P++ ++ C+ + +A E+ ++ + C P I ++++ + +G
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ EA ++ E RG P ++ Y +LI + + + EA ++D M+EKG P+ TY
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+IQ F KIGN + ILE M G P+ +++ L++G
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 157/298 (52%), Gaps = 2/298 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P +F L+ K E A +VL EM + G P+++ +T+++ G + A+ V
Sbjct: 281 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 340
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++++G PDA TY ++ + K+G + A ++++ M +GV P+ Y +++ + K
Sbjct: 341 FDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK 400
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A + D M+ P++ ++ L ++GK + A L+K +L K +P +
Sbjct: 401 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLV 460
Query: 363 SSTI-IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S TI I L K G++ EA F E +RG IP TY +LI + ++ + EA +L +DM
Sbjct: 461 SYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 520
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
V+ GV P+V Y+ LI G + +EM+ +GC PN+ ++ +L G +G
Sbjct: 521 VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 154/317 (48%), Gaps = 13/317 (4%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + + N +I L D ++ A + + M G P+++ TT++ G+ G + ++
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE----VTYGVMIE 298
L R + PD YT ++ GY K G L D V P ++Y +I+
Sbjct: 65 LNQALKR-FRPDVFLYTSVIHGYCKAGDL-------DTGYFRAVTPKASLDVISYTTVIK 116
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K+ EA L +++ P+ VID L + G++ED + ++ + +C+P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +I LCK + +A K+F++ ++G +P +TY TLI G +++++ EA +L
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D M+ KG EP TY ++ GFCK+ E ++ +M ++GC P F+ L+
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296
Query: 478 GNEGEVGKVVSMATASG 494
G E +V++ TA G
Sbjct: 297 GRAEEAYQVLTEMTARG 313
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 34/258 (13%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P +Y ++ G + ++ +A K + M DNG EP+ + + +I FCK +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEG------------------------------ 339
LL+ L+R + P L VI C+ G
Sbjct: 62 HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120
Query: 340 --KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLT 396
++++ACEL++ L C P+ + +I L K G+I + K F+E S +P+ T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y +I G+C++ L +A ++++ MV+KG P+ TY LI GF K E ++L+ ML
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240
Query: 457 DKGCFPNKTSFSLLIEGL 474
KG P ++ ++ G
Sbjct: 241 TKGPEPTAVTYGSIVHGF 258
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 8/235 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY +II ++ +A +L + ++ G + F +++ Y R + A +
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKS---GVGPDCFAYNSLMDGYVKLERVDQAFGVY 411
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ ++ + + N L++ L ++ + D +FK K +V P + + ILI L K
Sbjct: 412 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK 471
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V A EM G++P T+T+++ G I AK++ D++ G PD
Sbjct: 472 AGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQA 531
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
Y+ L+ G I + A V EM G PNEVTY V+ F + +G A +L
Sbjct: 532 YSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF---RAAGRALDL 583
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 184/353 (52%), Gaps = 13/353 (3%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A K F I K +++ +V S NTL+N + D V K+ K + P+VFT + LI
Sbjct: 259 AQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLD-VGFRLKHHMEKSRTRPDVFTYSALI 317
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
ALCK++ ++GA R+ EM G++PN V TT++ G+ G I+ K + +L +G
Sbjct: 318 NALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQ 377
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y L++G+ K G L A ++D M G+ P++VTY +I+ FC+G A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEI 437
Query: 313 LDDMLQR----KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
+M Q V SAL C +C+EG+V DA + +LR PD+ + ++
Sbjct: 438 RKEMDQNGIELDRVGFSALICG----MCKEGRVIDAERALREMLRAGMKPDDVTYTMMMD 493
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK+G KL E + G IP+++TYN L+ G+C+ ++ A L D M+ GV P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVP 553
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ TYN L++G + NA + + E+ G + S+ L+ LY + +
Sbjct: 554 DDITYNTLLEGHHRHANASKHYKQKPEI---GIVADLASYKSLVNELYRASKD 603
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 167/371 (45%), Gaps = 38/371 (10%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F+ SR VVP + C L+ + K + E+ G N+ ++ +
Sbjct: 193 FRLSRKHNFVVP-IRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFC 251
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G+I +A++VF +I R P ++ L++GY K+G L ++ ME + P+
Sbjct: 252 KEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVF 311
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +I A CK K A L +M +R +P+ + +I G+++ E ++++
Sbjct: 312 TYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKM 371
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI--------- 401
L K PD + +T+++ CK G + A+ + D RG P +TY TLI
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDV 431
Query: 402 --------------------------AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
GMC+ + +A R +M+ G++P+ TY M+
Sbjct: 432 DTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMM 491
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ FCK G+A+ G ++L+EM G PN ++++L+ GL + G ++ G
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGV 551
Query: 496 VESD-SWNFLL 505
V D ++N LL
Sbjct: 552 VPDDITYNTLL 562
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 196/372 (52%), Gaps = 4/372 (1%)
Query: 104 LKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++ PE+ N+ + VI GR + A L +E V S +T++N +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
D V + + + K + PN + +I LC+ + A EM G++P+ V
Sbjct: 294 FGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+TT++ G+ RGDI A + F ++ R PD TYT ++ G+ ++G + +A K+ EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G+EP+ VT+ +I +CK +A + + M+Q P+ +ID LC+EG +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTL 400
+ A EL + + P+ ++I++ LCK G I EA KL EFE + + +TY TL
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ C+S E+ +A + +M+ KG++P + T+N+L+ GFC G ++G ++L ML KG
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 461 FPNKTSFSLLIE 472
PN T+F+ L++
Sbjct: 593 APNATTFNSLVK 604
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 217/468 (46%), Gaps = 32/468 (6%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
+KP+ + L+ ++ + + + L L F +A N ++ +IH ++
Sbjct: 78 LKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA---RSRRDSNLESLCIVIHLAVASKD 134
Query: 94 FDAVESLLTELKQNPEIKCGENL---FITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSV 149
+SL++ + P++ ++ F ++ Y G F ++ F + R
Sbjct: 135 LKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 194
Query: 150 RSL-NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK-DDVEGAIRV 207
R + +LN + +V +V +CN+ + L K AI V
Sbjct: 195 RRVFEKMLN---------------------YGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
E P +G+ N+ ++ ++ G I+ A + + +G+ PD +Y+ +++GY +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G L K+++ M+ G++PN YG +I C+ K EA +M+++ +P + +
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-F 386
+ID C+ G + A + + + ++ PD + II C+ G + EA KLF E F
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P +T+ LI G C++ + +A R+ + M++ G PNV TY LI G CK G+
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L EM G PN +++ ++ GL +SGN E K+V A+G
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 169/325 (52%), Gaps = 9/325 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+ LI CK+ D+ A + EM S + P+++T+T I+ G+ GD+ A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F ++ +G PD+ T+T L++GY K G + DA +V + M G PN VTY +I+
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK A LL +M + P+ +++ LC+ G +E+A +L D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T++ CK G++ +A+++ E +G P+++T+N L+ G C L + +L +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ KG+ PN T+N L++ +C N K I ++M +G P+ ++ L++G ++ N
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 480 EGEV--------GKVVSMATASGSV 496
E GK S++ ++ SV
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSV 671
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 11/405 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y SII L R E +E+ + I ++ T+I + G A K
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
F + ++ V + +++ Q + L H MF + P+ T LI
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-----LEPDSVTFTELI 428
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK ++ A RV + M G PN+VT+TT++ G GD+++A + ++ G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +++G K G + +AVK++ E E G+ + VTY +++A+CK + +A+ +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +ML + P+ +++ C G +ED +L +L K P+ ++++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ A ++ D RG P TY L+ G C++ + EA L+ +M KG +V T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
Y++LI+GF K E + ++M +G +K F + Y+
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 134/290 (46%), Gaps = 16/290 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + ++ +LD A ++ H K N TY+SI++ L ++ +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKI--GLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
L+ E + + + T++ Y +G + A + + +Q ++ + N L+N
Sbjct: 512 KLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 159 LVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+H M ++ + PN T N L+K C +++++ A + +M
Sbjct: 571 FC-------LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
S G+ P+ T+ ++ G+ +++ A +F ++ +G+ +TY+VL+ G++K +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+A +V D+M G+ ++ + + KGK+ + +D++++ V
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 208/408 (50%), Gaps = 6/408 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC-GENLFITVIRNYGLAGRPEL 132
FS N T++ +I LAR + L+ ++ + + N IT + G + E
Sbjct: 270 FSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAE- 328
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A++ + +E + +V + N +++ L++ ++ + + F R ++P+V T N L+
Sbjct: 329 ALQ--MEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR-AMGLLPDVITYNSLL 385
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK +++ A+ +L ++ G+ P ++T+ T++ GY GD+ A+R+ +++++G
Sbjct: 386 NRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCF 445
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TYT+LM+G K+ L A + DEM G++P+ Y I A + A L
Sbjct: 446 PDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQL 505
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M+ + P + +ID LC+ G ++DA L +++ PD + +IH C+
Sbjct: 506 REVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCE 565
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EA+KL + G PS++TY L+ C L A + M++ G+EPN T
Sbjct: 566 RGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 625
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
YN+LI C G R EML++G PNK +++LLI+G GN
Sbjct: 626 YNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGN 673
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 202/427 (47%), Gaps = 15/427 (3%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK-CGENLFITVIRNYGLAGRPE 131
NFS DT H+ A + A L+T P+++ C N + V+R+ A R +
Sbjct: 167 NFSTERDTRHAT--PAACSTLCLAAFRLVTCHGVAPDVRDC--NRVLRVLRD---AARWD 219
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK---FKVVPNVFTC 188
+ + + V+ ++ + NTLL++ ++ R D ++ K + F + N T
Sbjct: 220 DVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSL--NDVTF 277
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N++I L ++ +E A++++D M + + T+ ++ + RG + A+ + ++ +
Sbjct: 278 NVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMEN 336
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G +P TY ++ G +K + A EM G+ P+ +TY ++ +CK E
Sbjct: 337 EGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKE 396
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A LL D+ + P+ +ID C G + +A L + ++ + C PD + +++
Sbjct: 397 ALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMN 456
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
K + A++ FDE +G P YNT I + A +L + M+ KG+ P
Sbjct: 457 GSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYP 516
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ TYN++I G CK GN K+ R+ +M+ G P+ +++ LI E G E K++
Sbjct: 517 DTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLL 576
Query: 488 SMATASG 494
+ + G
Sbjct: 577 NGMVSDG 583
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ T N++I LCK +++ A R+ +M S G+ P+ +T+T ++ + RG + A+
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ ++ G P TYT+L+ + G L A +M D G+EPNE+TY V+I A
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C ++ A +ML+R P+ +ID C EG DA L+ + + PD
Sbjct: 634 CMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDY 693
Query: 361 AISSTIIHWLCKEGKIWEA 379
+ + EG ++ A
Sbjct: 694 CTHNALFKGF-DEGHMYHA 711
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ F N I A A ++ + M G+ P+ VT+ I+ G G++++AKR+
Sbjct: 481 PDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRL 540
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ G PD TYT L+ + + G L +A K+++ M +G++P+ VTY +++ C+
Sbjct: 541 KTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCR 600
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A ML P+ +I LC G+ A + +L + P+
Sbjct: 601 RGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYT 660
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCE 406
+ +I C+EG +A +L+ E + I P T+N L G E
Sbjct: 661 YTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDE 705
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 205/415 (49%), Gaps = 11/415 (2%)
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
P + + + +LA A D V+ L E++ + C E + + + AG P+
Sbjct: 49 PGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLR-GVPCTEGALVAAVGAFARAGAPD 107
Query: 132 LAVKTFLR-IEKFNVQRSV--RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
A+KTF R + R R N L++AL++ V L++ N R K V PNVFT
Sbjct: 108 RALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMR-KDGVHPNVFTY 166
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N+L++ALC+ + V A ++LDEM G P+ VT+ TI+ ++ A V +
Sbjct: 167 NLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-- 224
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
P A +Y ++ + R+ + V+ +M G++PN +TY +++AFCK +
Sbjct: 225 ---PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 281
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L M+ P+ ++ L ++G+V DA ++W+ ++ + P + +I
Sbjct: 282 ACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIR 341
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC G + A + + E+ G P++ TY+TLI G ++ +L A +W+DM G +P
Sbjct: 342 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 401
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
NV Y ++ FCK + ++++ML + C PN +F+ LI L + G
Sbjct: 402 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 456
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 220/483 (45%), Gaps = 24/483 (4%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGK--FHPNFSHNYDTYHSIIHKLARARA 93
+P RLY L+ + R+ + + ++ K HPN TY+ ++ L +
Sbjct: 124 RPTEPRLY-NHLIDALLRENMVGAVVLVYDNMRKDGVHPNVF----TYNLLVRALCQNNR 178
Query: 94 FDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
A +L E+ + P+ + + T++ R + A + +
Sbjct: 179 VGAARKMLDEMARKGCPPD----DVTYATIVSVLCKLDRLDEATEVLAAMPPV-----AA 229
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N ++ AL + R V + + + + PNV T ++ A CK ++ A +L
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGR-GLQPNVITYTTIVDAFCKAGELRMACAILAR 288
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G PN+VT T ++ G G + +A ++ ++ GW P +Y +L+ G +G
Sbjct: 289 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 348
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A +++ ME +G PN TY +I+ F K G A ++ +DM + P+ +
Sbjct: 349 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 408
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
++D+ C++ A L ++L +NC P+ +T+I LC ++ A +F E R G
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+P+ TYN LI G+ +A + +M G+E ++ TYN ++ G C+ ++E +
Sbjct: 469 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV 509
+ +M+ +G PN +FS +I + EGEV M A V + T ++
Sbjct: 529 VFVGKMIVQGIQPNAFTFSAIIHAYCK---EGEVRMAAWMLGAMNVVNCHRNILVYTILM 585
Query: 510 SDL 512
++L
Sbjct: 586 AEL 588
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 170/400 (42%), Gaps = 48/400 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y++I+ L R V S+++++ P + + T++ + AG +A
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI----TYTTIVDAFCKAGELRMACAI 285
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV--VPNVFTCNILIKA 194
R+ +V + L+ L + R VH R P+ + NILI+
Sbjct: 286 LARMVITGCTPNVVTFTALVRGLFDDGR---VHDALDMWRWMVAEGWAPSTVSYNILIRG 342
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LC D++GA +L+ M G PN+ T++T++ G+ GD+ A ++ D+ G P+
Sbjct: 343 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPN 402
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
YT ++D + K A ++D+M PN VT+ +I + C ++ G A +
Sbjct: 403 VVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFH 462
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK------------------------- 349
+M + VP+ ++I L EG DA +
Sbjct: 463 EMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTR 522
Query: 350 ----------RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
+++ + P+ S IIH CKEG++ A + + ++L Y
Sbjct: 523 MSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYT 582
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L+A +C +L +A M+ +G+ PN T+N+L++G
Sbjct: 583 ILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 622
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 8/269 (2%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDL---VHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+E+ +VR+ +TL++ +K DL + + SR K PNV ++ C
Sbjct: 359 MEQHGCFPNVRTYSTLIDGF--SKAGDLGGAISIWNDMSRSGCK--PNVVVYTNMVDVFC 414
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
KK A ++D+M PN VT T++ + A VF ++ G VP+
Sbjct: 415 KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 474
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G + G DA+ ++ EM+ +G+E + VTY ++ C+ + S EA + M
Sbjct: 475 TYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 534
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + P++ +I C+EG+V A + + NC + + + ++ LC + K+
Sbjct: 535 IVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKL 594
Query: 377 WEAKK-LFDEFERGSIPSLLTYNTLIAGM 404
+A L G P+ +T+N L+ G+
Sbjct: 595 VDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N N T++++I L R + E++++ + G + +I G
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT-YNELIHGLFREGNCGD 491
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ ++ ++ S+ + NT+++ L Q R ++F + PN FT + +I
Sbjct: 492 ALHMVTEMQSHGIELSLVTYNTVVSGLCQT-RMSREAMVFVGKMIVQGIQPNAFTFSAII 550
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
A CK+ +V A +L M + N++ +T ++ + + +A +L G
Sbjct: 551 HAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIY 610
Query: 253 PDATTYTVLMDGYIK 267
P+ T+ VL+ G +
Sbjct: 611 PNTVTWNVLVRGVFR 625
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 202/398 (50%), Gaps = 6/398 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I ++ D +L + P++ + T++R+ +G+ + A++ R
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMSVAPDVV----TYNTILRSLCDSGKLKEAMEVLDR 233
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + L+ A + + R K P+V T N+LI +CK+
Sbjct: 234 QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK-GCKPDVVTYNVLINGICKEG 292
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ L+ MPS G PN++TH IL G +A+R+ D+L +G P T+
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + L A+ V+++M +G PN ++Y ++ FC+ KK A L+ M+ R
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GKV+ A E+ +L K C P +T+I L K GK A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E R G P ++TY+TL+ G+ ++ EA +++ DM ++P+ TYN ++ G
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
CK I L M++KGC P + ++++LIEG+ +
Sbjct: 533 LCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 179/346 (51%), Gaps = 7/346 (2%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
F NI ++ L + ++E ++ L+ M G +P+++ T+++ G+ G + A R+
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ + G VPD TY VL+ GY K G + A++V++ M V P+ VTY ++ + C K
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA +LD LQR+ P +I+ C + V A +L + +K C PD +
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283
Query: 366 IIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ +CKEG++ EA K + G P+++T+N ++ MC + +A RL DM+ KG
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
P+V T+N+LI C+ I +LE+M GC PN S++ L+ G +
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403
Query: 485 KVVSMATASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ + + + G + ++N LLT + D +D+ L++L K C
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGC 449
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 168/315 (53%), Gaps = 6/315 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P+V C LI+ C+ + A R+++ + + G VP+++T+ ++GGY G+I+ A
Sbjct: 138 IPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL- 196
Query: 242 VFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++L+R V PD TY ++ G+L +A++V+D P+ +TY ++IEA
Sbjct: 197 ---EVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEAT 253
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C G+A LLD+M ++ P +I+ +C+EG++++A + + C P+
Sbjct: 254 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNV 313
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ +C G+ +A++L D +G PS++T+N LI +C L A + +
Sbjct: 314 ITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK 373
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G PN +YN L+ GFC+ I LE M+ +GC+P+ +++ L+ L + G
Sbjct: 374 MPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 433
Query: 480 EGEVGKVVSMATASG 494
++++ ++ G
Sbjct: 434 VDAAVEILNQLSSKG 448
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 142/285 (49%), Gaps = 14/285 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L++ I ++ LD A++ + + N T++ I+ + + E LL+++ +
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSY--GCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341
Query: 107 ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+P + N+ I + L GR A+ ++ K + S N LL+ Q K
Sbjct: 342 KGCSPSV-VTFNILINFLCRKRLLGR---AIDVLEKMPKHGCVPNSLSYNPLLHGFCQEK 397
Query: 164 RYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ D + +L SR + P++ T N L+ ALCK V+ A+ +L+++ S G P L+
Sbjct: 398 KMDRAIEYLEIMVSRGCY---PDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLI 454
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ T++ G G E A + ++ +G PD TY+ L+ G + G++ +A+K+ +M
Sbjct: 455 TYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
E ++P+ VTY ++ CK +++ A + L M+++ P+ A
Sbjct: 515 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEA 559
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 213/412 (51%), Gaps = 22/412 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N+ TY+++IH L +AR D LL ++K NP G L VI AGR A
Sbjct: 79 NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNP----GTLLHNVVIGGLCRAGRLRHA 134
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLM--FKNSRHKFKVVPNVFTCNI 190
+ + ++ + + L++ L + R D V ++ ++RH VP+ T +
Sbjct: 135 LGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH----VPDNTTLTV 189
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA-KRVFGDILDR 249
++++LC D V+ A +++EM GM N +T++ ++ G ++ A + G++ R
Sbjct: 190 VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRR 249
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+ PD TY+ ++DG K GRL DAV + +EM P +TY +I +C+ EA
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEA 306
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LL M+ P ++ C+ G+++DA EL+++++ PD ++++
Sbjct: 307 IRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 366
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC EG++ +A +L +E RG P++ TYN ++ G C+S ++ +A L D +G PN
Sbjct: 367 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPN 426
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKG--CFPNKTSFSLLIEGLYESG 478
TYN+L+ G C+ G + ++ L+++ +G C + ++++++ L G
Sbjct: 427 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 169/328 (51%), Gaps = 6/328 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
LNT+L L + +F V N T LI LCK ++ A+ +L +M
Sbjct: 49 LNTILAELCDARDTTTAMALFDKMAELGAV--NHTTYYNLIHPLCKARLLDEAMGLLLDM 106
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
S GM P + H ++GG G + +A V+ + D PD TYT L+ G K GRL
Sbjct: 107 KSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRL 165
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
DAV+V+ EM P+ T V++++ C G + +AR L+++ML R ++ +
Sbjct: 166 RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225
Query: 332 IDLLCEEGKVEDACELW-KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+D LC+ ++++A L + R+ PD ST+I LCK G++ +A +F+E
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS--C 283
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+ +TYN+LI G C + ++ EA RL MV+ P+V TY L+ FCK+G +
Sbjct: 284 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ ++M+ P+ +F+ L++GL G
Sbjct: 344 LFQQMVANKLSPDVVTFTSLVDGLCGEG 371
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 209/442 (47%), Gaps = 51/442 (11%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAV 97
P L ++ + R L AL ++ HP ++ TY ++H L++A R DAV
Sbjct: 113 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP---DFLTYTKLVHGLSKAGRLRDAV 169
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+ +L E+ + L + V+++ L R + A + + + + + + L++
Sbjct: 170 Q-VLQEMVSARHVPDNTTLTV-VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 227
Query: 158 ALVQNKRYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L + +R D + L+ + +R F P++ T + +I LCK + A+ + +EM
Sbjct: 228 GLCKCERLDEAVALLLGEVTRRGF--TPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC-- 283
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P +T+ +++GGY GD++ A R+ G ++D PD TYT LM + K+GRL DA
Sbjct: 284 -APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ +M N + P+ VT+ +++ C
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCG--------------------------------- 369
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
EG++EDA EL + + R+ C P + ++ CK ++ +A++L +F RG +P+
Sbjct: 370 --EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNT 427
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+TYN L+AG C + +A + D + +G +V Y +++ C+ G + ++
Sbjct: 428 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY 487
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
EEM+ +G P +F+ ++ L
Sbjct: 488 EEMIQRGYVPAAATFATVVFAL 509
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 158/317 (49%), Gaps = 9/317 (2%)
Query: 73 NFSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
F+ + TY ++I L +A R DAV+ + E+ P + ++I Y AG +
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVD-IFEEMSCAPTAI----TYNSLIGGYCRAGDMD 304
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A++ ++ N V + TL++A + R D + +F+ K+ P+V T L
Sbjct: 305 EAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVAN-KLSPDVVTFTSL 363
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ LC + +E A+ +L+E+ G P + T+ ++ GY + A+ + D RG+
Sbjct: 364 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGF 423
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVT-YGVMIEAFCKGKKSGEA 309
VP+ TY +L+ G + GR A++ +D++ + G P V Y ++++A C+ ++ +A
Sbjct: 424 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 483
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
++M+QR YVP++A V+ LC+ + + A EL + +++ P ++
Sbjct: 484 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 543
Query: 370 LCKEGKIWEAKKLFDEF 386
C+ G I +A +L E
Sbjct: 544 YCRAGMIQKADELASEL 560
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 133/317 (41%), Gaps = 78/317 (24%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTD-AVKVMDEMEDNGVEP---------------- 288
+LD G+ D++T+ V++ G +L ++DE+ D G+ P
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 289 ------------------NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
N TY +I CK + EA LL DM R P + L
Sbjct: 61 DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120
Query: 331 VIDLLC----------------------------------EEGKVEDACELWKRLLRKNC 356
VI LC + G++ DA ++ + ++
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEA-G 414
+PDN + ++ LC ++ +A++L +E RG + +TY+ L+ G+C+ L EA
Sbjct: 181 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L ++ +G P++ TY+ +I G CK G ++ + I EEM C P +++ LI G
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGY 297
Query: 475 YESGNEGE----VGKVV 487
+G+ E +GK+V
Sbjct: 298 CRAGDMDEAIRLLGKMV 314
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
PD +TI+ LC A LFD+ + TY LI +C++ L EA L
Sbjct: 44 PDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLL 103
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
DM +G+ P +N++I G C+ G + + + +M D P+ +++ L+ GL ++
Sbjct: 104 LDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKA 162
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDL 512
G + +V+ ++ V N LT +V L
Sbjct: 163 GRLRDAVQVLQEMVSARHVPD---NTTLTVVVQSL 194
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 184/357 (51%), Gaps = 2/357 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T++ Y +GR E A +++ ++ + +L++ + + R + +F+ K
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P+ N LI C K +++ A DEM G+ P + T+ +++ +
Sbjct: 321 -GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDE 379
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ + +I ++G PDA TY +L++GY + A + DEM +G++P + TY ++
Sbjct: 380 AECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K + EA +L + +P + + +ID C V+ A EL K + R P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D +TI+ C+EGK+ EA++LFDE +R I P +++NTLI+G ++ +A R+
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++M++ G P V TYN L+QG CK +L+EM+ KG P+ T++ LIEG+
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 204/376 (54%), Gaps = 4/376 (1%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E V+ ++ + NT+++ + R + + + + K+ P+ FT LI +CK+
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMCKQG 305
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A ++ +EM G+ P+ V + T++ G+ +G+++ A ++L +G P +TY
Sbjct: 306 RLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYN 365
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ R +A ++ E+++ G+ P+ +TY ++I +C+ + +A L D+ML
Sbjct: 366 SLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLAS 425
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ +L ++ ++++A +L+K++ + +PD + + +I C + A
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGA 485
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L + +R +P +T+NT++ G C ++ EA L+D+M +G++P+ ++N LI G
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG-KVVSMATASGSVE 497
+ + G+ K+ R+ EMLD G P +++ L++GL ++ EG++ +++ + G
Sbjct: 546 YSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN-QEGDLAEELLKEMVSKGMTP 604
Query: 498 SDSWNFLLTRIVSDLD 513
D+ F L ++ ++
Sbjct: 605 DDTTYFTLIEGIAKVN 620
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 3/367 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++I+H + +A +++LT +K+ +I+ + ++I GR E A K
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKI 313
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + ++ S NTL++ D+ +K+ K + P + T N LI AL
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS-AYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A ++ E+ G+ P+ +T+ ++ GY + + A + ++L G P
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+ K R+ +A + ++ GV P+ + + +I+ C A LL DM
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ K P ++ C EGKVE+A EL+ + R+ PD+ +T+I + G I
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A ++ +E + G P++LTYN L+ G+C++ E A L +MV KG+ P+ TY L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 436 IQGFCKI 442
I+G K+
Sbjct: 613 IEGIAKV 619
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+P + TCN L+ K + E A + EM + + ++ T ++ G ++ AK
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
G + G P+ TY ++ GY GR+ A ++ M+ +EP+ TYG +I
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGM 301
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + EA + ++M+Q+ PS+ + +ID C +G ++ A +L+K P
Sbjct: 302 CKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTM 361
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +++IH L E + EA+ + E E+G P +TYN LI G C A +A L D+
Sbjct: 362 STYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDE 421
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ G++P TY L+ K KE + +++ +G P+ F+ LI+G + N
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSN 481
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 155/307 (50%), Gaps = 1/307 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+ LIK+ C + + A M G++P + T ++L ++ E A ++ ++
Sbjct: 155 DYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFR 214
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
T+ ++++ K G+L A + ME +GV+PN VTY ++ +C +
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEA 274
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L M ++K P S +I +C++G++E+A ++++ +++K P I +T+I
Sbjct: 275 ADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID 334
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C +G + A DE ++G P++ TYN+LI + EA + ++ EKG+ P
Sbjct: 335 GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ TYN+LI G+C+ NAK+ + +EML G P K +++ L+ L + E +
Sbjct: 395 DAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLF 454
Query: 488 SMATASG 494
T+ G
Sbjct: 455 KKITSEG 461
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 11/307 (3%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL---DRGWVPDATTYTV 260
AI ++ +PS P L LGG G + + +F + DR + +
Sbjct: 103 AIVIVARLPSPK--PALHLLRQALGG----GTTNSIREIFEFLAASRDRLGFKSSIVFDY 156
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + R +A + M++ GV P T ++ F K ++ A L +M + +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
S +I++LC+EGK++ A + + P+ +TI+H C G++ A
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ +R I P TY +LI+GMC+ L EA +++++MV+KG+ P+ YN LI GF
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVES 498
C GN +EML KG P ++++ LI L+ E ++ G S ++
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Query: 499 DSWNFLL 505
++N L+
Sbjct: 397 ITYNILI 403
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 35/271 (12%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPE---------------------- 109
S TY+S+IH L + D E ++ E+++ +P+
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417
Query: 110 ---------IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
IK + + +++ R + A F +I V N L++
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
N + K+ + KV P+ T N +++ C++ VE A + DEM G+ P+
Sbjct: 478 SNSNVKGAFELLKD-MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
++ T++ GY RGDI++A RV ++LD G+ P TY L+ G K A +++ E
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
M G+ P++ TY +IE K E +N
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 196/372 (52%), Gaps = 4/372 (1%)
Query: 104 LKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++ PE+ N+ + VI GR + A L +E V S +T++N +
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
D V + + + K + PN + +I LC+ + A EM G++P+ V
Sbjct: 737 FGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+TT++ G+ RGDI A + F ++ R PD TYT ++ G+ ++G + +A K+ EM
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G+EP+ VT+ +I +CK +A + + M+Q P+ +ID LC+EG +
Sbjct: 856 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTL 400
+ A EL + + P+ ++I++ LCK G I EA KL EFE + + +TY TL
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ C+S E+ +A + +M+ KG++P + T+N+L+ GFC G ++G ++L ML KG
Sbjct: 976 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035
Query: 461 FPNKTSFSLLIE 472
PN T+F+ L++
Sbjct: 1036 APNATTFNSLVK 1047
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 217/468 (46%), Gaps = 32/468 (6%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
+KP+ + L+ ++ + + + L L F +A N ++ +IH ++
Sbjct: 521 LKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA---RSRRDSNLESLCIVIHLAVASKD 577
Query: 94 FDAVESLLTELKQNPEIKCGENL---FITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSV 149
+SL++ + P++ ++ F ++ Y G F ++ F + R
Sbjct: 578 LKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 637
Query: 150 RSL-NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK-DDVEGAIRV 207
R + +LN + +V +V +CN+ + L K AI V
Sbjct: 638 RRVFEKMLN---------------------YGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
E P +G+ N+ ++ ++ G I+ A + + +G+ PD +Y+ +++GY +
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G L K+++ M+ G++PN YG +I C+ K EA +M+++ +P + +
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 796
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-F 386
+ID C+ G + A + + + ++ PD + II C+ G + EA KLF E F
Sbjct: 797 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P +T+ LI G C++ + +A R+ + M++ G PNV TY LI G CK G+
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 916
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L EM G PN +++ ++ GL +SGN E K+V A+G
Sbjct: 917 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 169/325 (52%), Gaps = 9/325 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+ LI CK+ D+ A + EM S + P+++T+T I+ G+ GD+ A
Sbjct: 790 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F ++ +G PD+ T+T L++GY K G + DA +V + M G PN VTY +I+
Sbjct: 850 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK A LL +M + P+ +++ LC+ G +E+A +L D
Sbjct: 910 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T++ CK G++ +A+++ E +G P+++T+N L+ G C L + +L +
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ KG+ PN T+N L++ +C N K I ++M +G P+ ++ L++G ++ N
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089
Query: 480 EGEV--------GKVVSMATASGSV 496
E GK S++ ++ SV
Sbjct: 1090 MKEAWFLFQEMKGKGFSVSVSTYSV 1114
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 11/405 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y SII L R E +E+ + I ++ T+I + G A K
Sbjct: 758 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKF 816
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
F + ++ V + +++ Q + L H MF + P+ T LI
Sbjct: 817 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-----LEPDSVTFTELI 871
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK ++ A RV + M G PN+VT+TT++ G GD+++A + ++ G
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +++G K G + +AVK++ E E G+ + VTY +++A+CK + +A+ +
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +ML + P+ +++ C G +ED +L +L K P+ ++++ C
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ A ++ D RG P TY L+ G C++ + EA L+ +M KG +V T
Sbjct: 1052 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 1111
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
Y++LI+GF K E + ++M +G +K F + Y+
Sbjct: 1112 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 1156
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + ++ +LD A ++ H K N TY+SI++ L ++ + L+ E +
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKI--GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-E 961
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + T++ Y +G + A + + +Q ++ + N L+N
Sbjct: 962 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC------ 1015
Query: 167 LVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+H M ++ + PN T N L+K C +++++ A + +M S G+ P+
Sbjct: 1016 -LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T+ ++ G+ +++ A +F ++ +G+ +TY+VL+ G++K + +A +V D+
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
M G+ ++ + + KGK+ + +D++++ V
Sbjct: 1135 MRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 239/490 (48%), Gaps = 13/490 (2%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P +L ++ ++ ++++F AG +SH +D + +I KL F +E LL +
Sbjct: 66 PFQLCKLLELPLDIPTSMELFQRAGA-QKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQ 124
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQN 162
+K + + E+LFI ++++YG AG P A + L + ++ + +S N +L+ LV
Sbjct: 125 MK-DEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDG 183
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ +F + + V P V+T +++KALC +V+ A +L +M G VPN V
Sbjct: 184 DCPRVAPNVFYDMLSR-GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVI 242
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ T++ + A ++ D+ PD T+ ++ G + GR+ +A K++D M
Sbjct: 243 YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML 302
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G + +TYG ++ C+ + EAR LL+ + P++ L +I G+ E
Sbjct: 303 LRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFE 358
Query: 343 DACE-LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
+A + L+ ++ PD + +I L K+G + A +L +E P+++TY L
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTIL 418
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G C+ L EA + + M KG+ N YN LI CK GN +E +++ EM KGC
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC 478
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIV--SDLDSGAG 517
P+ +F+ LI GL ++ E + G + + ++N L+ + +
Sbjct: 479 KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFK 538
Query: 518 ALDELLVKNC 527
+DE+L + C
Sbjct: 539 LVDEMLFRGC 548
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 186/366 (50%), Gaps = 2/366 (0%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NTL++ V + R++ + N+ P+ +T NI+I L KK + A+ +L+EM
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ PN++T+T ++ G+ +G +E A + + +G + Y L+ K G +
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIE 464
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A+++ EM G +P+ T+ +I CK K EA +L DM + ++ ++
Sbjct: 465 EALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLV 524
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSI 391
++ A +L +L + C DN + +I LCK G + + LF+E +G
Sbjct: 525 HAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF 584
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P++++ N LI+G+C + ++ +A + DM+ +G+ P++ TYN LI G CK+G+ +E +
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNL 644
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIVS 510
++ +G P+ +++ LI G + ++ SG + ++ +W+ L+ IV
Sbjct: 645 FNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Query: 511 DLDSGA 516
+ GA
Sbjct: 705 KIPWGA 710
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 194/394 (49%), Gaps = 2/394 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ + + N + +V + NT+++ L ++++ + +F K
Sbjct: 184 TLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAK 243
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PNV T N +I LCK + + +++EM ++PN+V TT++ G +
Sbjct: 244 -GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTI 302
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V ++ RG PD TYT LMDG+ + +A KV D M G PN ++Y +I
Sbjct: 303 AHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLIN 362
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK ++ +A L ++M QR+ VP+ +I LC G++ DA L+ ++ +P
Sbjct: 363 GYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIP 422
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D ++ +LCK + +A + E ++ P + +YN +I GMC EL AG L+
Sbjct: 423 DLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ KG+ P+V+TY ++I G C G E ++ EM GC P+ +++L+ G +
Sbjct: 483 SSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRN 542
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+++ G S L+ ++SD
Sbjct: 543 NETLSAIQLLQEMLGRGFSADASTITLIVEMLSD 576
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 210/429 (48%), Gaps = 10/429 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFL 138
+ I+ +A + + V SL KQ + +++ VI ++ R +
Sbjct: 77 FAKILTSIANMKHYSTVLSLS---KQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLA 133
Query: 139 RIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+I K Q + TL+ L V+ K + +HL K F+ PN T LI LCK
Sbjct: 134 KIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ--PNGVTYGTLIHGLCK 191
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ AIR+L M PN++T+ TI+ + A +F +++ +G P+ +T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++ G K +M+EM D+ + PN V + +++A CK A +++D M+
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR P ++D C ++++A +++ ++RK C P+ ST+I+ CK +I
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A LF+E +R +P+++TYNTLI G+C L +A L+ +MV G P++ TY +L+
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK + + + +L+ + P+ S++++I+G+ G G + S ++ G +
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG-L 490
Query: 497 ESDSWNFLL 505
D W + +
Sbjct: 491 HPDVWTYTI 499
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 208/417 (49%), Gaps = 7/417 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
F N TY ++IH L + A LL + Q C N+ + T+I +
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK---NCEPNVITYNTIIDCLFKDRQVN 231
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A+ F + + +V + N++++ L + + V + N K++PNV L
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLM-NEMVDSKIMPNVVIFTTL 290
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ ALCK+ V A V+D M G+ P++VT+T ++ G+ R +++ A +VF ++ +G
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ +Y+ L++GY K+ R+ A+ + +EM + PN VTY +I C + +A
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M+ +P ++D LC+ ++ A + K + N PD + +I +C
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G++ A LF +G P + TY +I G+C L EA +L+ +M G P+
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
TYN++ +GF + I++L+EML +G + ++ +L++E L + G + V +++
Sbjct: 531 TYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 160/350 (45%), Gaps = 36/350 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V ++ ++ + + +M S+G+ ++ T ++ + ++ V
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
I G PD T+T L+ G G++ +A+ + D+M G +PN VTYG +I CK
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
S A LL M+Q+ P+ +ID L ++ +V +A ++ ++ K P+ +
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251
Query: 363 SSTIIH-------W----------------------------LCKEGKIWEAKKLFD-EF 386
++IIH W LCKEG + A + D
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+RG P ++TY L+ G C +E+ EA +++D MV KG PNV +Y+ LI G+CKI
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ + + EEM + PN +++ LI GL G + + ASG +
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQI 421
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 6/297 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I+ A F +L P + ++ + + + + +M+ G+ + T +
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + ++L + + + P +A +I LC EGK+ +A L+ +++ +
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
P+ T+IH LCK G A +L ++ P+++TYNT+I + + ++ EA
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ +M+ KG+ PNV TYN +I G CK K ++ EM+D PN F+ L++ L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTR----IVSDLDSGAGALDELLVKNC 527
+ G VV + G VE D + + S++D D ++ K C
Sbjct: 295 CKEGMVTIAHDVVDVMIQRG-VEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y ++I+ + + D L E+ Q E+ + T+I GR A+
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQR-ELVPNIVTYNTLIHGLCHVGRLRDAIAL 411
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + LL+ L + + D M K + + P++ + NI+I +C
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK-AIEGSNLAPDIQSYNIVIDGMC 470
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++E A + + S G+ P++ T+T ++ G +G + A ++F ++ G PD
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY ++ G+++ A++++ EM G + T +++E + +L +
Sbjct: 531 TYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEF 590
Query: 317 LQ 318
+Q
Sbjct: 591 VQ 592
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 183/363 (50%), Gaps = 9/363 (2%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ S N LL+ L + K Y V ++ R + + T NIL+ LC + +
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLS-GLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
+ G PN+VT+ T++ G I A R+F + G PD TY L+ G
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 268 LGRLTDAVKVMDEMEDN------GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
G + A+K+ EM ++ +PN +TY ++++ CK + EA+ L ++M +
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+PS +I C GK E++ L +L + PD + +I LCKEGK+ EAKK
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306
Query: 382 LFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L E G +P L+TYN+LI G C +L A L+ M KG EP+V +YN+LI G+
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K +E +++ EML G PN ++ L++G++ +G + K+ S+ A G E +S
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE-NS 425
Query: 501 WNF 503
+ +
Sbjct: 426 YTY 428
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 209/411 (50%), Gaps = 43/411 (10%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL---VHLMFKN- 174
T+I+ + R A + FLR++K V + TL+ L ++ +H N
Sbjct: 144 TLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203
Query: 175 -SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
SR++ PNV T NI++ LCK + A ++ +EM + GM+P+++++ +++ G+
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA 263
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G E +KR+ ++LD+G PD T+ VL+D K G++ +A K++ M ++G+ P+ VTY
Sbjct: 264 GKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTY 323
Query: 294 GVMIEAFC-----------------------------------KGKKSGEARNLLDDMLQ 318
+IE FC K K EA L ++ML
Sbjct: 324 NSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 383
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI-IHWLCKEGKIW 377
P+ ++ + GKV+DA +L+ +++ + + +N+ + I + LCK ++
Sbjct: 384 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFS-VMKAHGIAENSYTYGIFLDGLCKNDCLF 442
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA KLF E + + + N LI G+C++ +L A L++ + +G EPNV TY ++I
Sbjct: 443 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 502
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
GFC+ G + ++++M GC P+ +++ L+ G YES EV +++
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLL 553
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 203/407 (49%), Gaps = 17/407 (4%)
Query: 56 NLDLAL----QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
N+++AL ++ + ++ N N TY+ I+ L + D + L E+K I
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DL 167
+ + ++I + AG+ E + + + +Q + + N L++ L + + L
Sbjct: 249 SIIS-YNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 307
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ +M ++ +VP++ T N LI+ C D+ A + MPS G P+++++ ++
Sbjct: 308 LGVMIESG-----IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
GY +E A +++ ++L G P+ TY L+ G G++ DA K+ M+ +G+
Sbjct: 363 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 422
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSALCCKVIDLLCEEGKVEDACE 346
N TYG+ ++ CK EA L ++ + + L C +ID LC+ GK+E A E
Sbjct: 423 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC-LIDGLCKAGKLETAWE 481
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
L+++L + P+ + +IH C+EG++ +A L + E G P ++TYNTL+ G
Sbjct: 482 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 541
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
ES +L E +L M +K V P+ T ++++ K +E + +L
Sbjct: 542 ESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 188/369 (50%), Gaps = 4/369 (1%)
Query: 109 EIKCGENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
EI C N+ I GL GR + A + F ++ + S+ S N+L++ +++
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWE 267
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ + + P++ T N+LI LCK+ V A ++L M G+VP+LVT+ ++
Sbjct: 268 ESKRLLDEMLDQ-GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 326
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G+ GD+ +A+ +F + +G PD +Y VL++GY K ++ +A+K+ +EM G
Sbjct: 327 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN +TY +++ K +A+ L M +S +D LC+ + +A +
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
L+ L N + + +I LCK GK+ A +LF++ G P+++TY +I G C
Sbjct: 447 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
++ +A L M G P++ TYN L++GF + +E +++L M K P+
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 566
Query: 466 SFSLLIEGL 474
+ S++++ L
Sbjct: 567 TCSIVVDML 575
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 150/300 (50%), Gaps = 10/300 (3%)
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+A F ++ P +++ L+ G K+ + + ++M +G+ + T +++
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
C + E +L+R Y P+ +I LC E ++ +A L+ R+ + C
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDE-------FERGSIPSLLTYNTLIAGMCESAEL 410
PD T+I LC G I A KL E +E P+++TYN ++ G+C+
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA +L+++M +G+ P++ +YN LI GFC G +E R+L+EMLD+G P+ +F++L
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 471 IEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTR--IVSDLDSGAGALDELLVKNC 527
I+ L + G E K++ + SG V + ++N L+ +V DL+S + K C
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 35/239 (14%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V + N+LI K VE A+++ +EM +G PN++T+ ++L G G +++AK++
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412
Query: 243 FGDILDRGWVPDATTYTV-----------------------------------LMDGYIK 267
F + G ++ TY + L+DG K
Sbjct: 413 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 472
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G+L A ++ +++ + G EPN VTY +MI FC+ + +A L+ M P
Sbjct: 473 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 532
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
++ E K+E+ +L R+ +K+ PD S ++ L K+ K E L F
Sbjct: 533 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 6/274 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I ++ L + P C ++ + +I Y + E A+K +
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSM---PSKGCEPDVISYNVLINGYSKTLKVEEAMKLY 378
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + +V + ++LL + + D +F + + N +T I + LCK
Sbjct: 379 NEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK-AHGIAENSYTYGIFLDGLCK 437
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D + A+++ E+ S + ++ G G +E A +F + + G P+ T
Sbjct: 438 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 497
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT+++ G+ + G++ A ++ +ME NG P+ +TY ++ F + K E LL M
Sbjct: 498 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 557
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Q+ P + C V+D+L ++ K ++ L R
Sbjct: 558 QKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 184/325 (56%), Gaps = 2/325 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ + N +I LCK +V A ++L M G+ P+ V +TT++ G+ G++ A ++
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ + VPD TYT ++ G K G++ +A ++ +EM G+EP+EVTY +I+ +CK
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA ++ + M+Q+ P+ + D LC+ G+++ A EL + RK P+
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+TI++ LCK G I + KL +E + G P +TY TL+ C+ E+ +A L M+
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIML 549
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
K ++P + T+N+L+ GFC G ++G R++E ML+KG PN T+F+ L++ N
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609
Query: 482 EVGKVVSMATASGSV-ESDSWNFLL 505
++ G + +S+++N L+
Sbjct: 610 ATTEIYKAMHDRGVMPDSNTYNILI 634
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 229/471 (48%), Gaps = 34/471 (7%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQN-LDLALQIFHYAG-----KFHPNFSHNYDTYHSIIHKL 88
+KP+ R P L+ ++ +N L L +F++A +FHP ++ ++H
Sbjct: 70 LKPYESRFKPSHLIWVLINLKNDYPLVLNLFNWAKSQSQQQFHPTL----ESLCIVVHLS 125
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFI---TVIRNYGLAGRPELAVKTFLRIEKFNV 145
+ + L+ E P+I ++ + +I Y G L + ++
Sbjct: 126 VASNDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQV----- 180
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL-CKKDDVEGA 204
LV+N +F + ++ VV +V +CN+ + L C + ++ A
Sbjct: 181 -------------LVENGFVLEAQKLF-HKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIA 226
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
++V +E P +G+ N V+ +L G + A + + DRG PD +Y V++ G
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSG 286
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y ++G L +K++DE++ G++P+E Y +I CK + EA LL M + P
Sbjct: 287 YCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPD 346
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ + VI C+ G V AC+L+ + RK +PD +++IH +CK GK+ EA+++F+
Sbjct: 347 NVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 385 E-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E +G P +TY LI G C++ E+ EA + + MV+KG+ PNV TY L G CK G
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L EM KG PN +++ ++ GL + GN + K++ +G
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 165/306 (53%), Gaps = 1/306 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K+ V P+ +I CK +V A ++ DEM +VP++VT+T+++ G G +
Sbjct: 340 KWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMV 399
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+ +F ++L +G PD TYT L+DGY K G + +A V ++M G+ PN VTY +
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALA 459
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ CK + A LL +M ++ P+ +++ LC+ G +E +L + +
Sbjct: 460 DGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY 519
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRL 416
PD +T++ CK G++ +A +L + P+L+T+N L+ G C S L + RL
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ M+EKG+ PN T+N L++ +C N + I + M D+G P+ ++++LI+G +
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCK 639
Query: 477 SGNEGE 482
+ N E
Sbjct: 640 ARNMKE 645
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 182/365 (49%), Gaps = 2/365 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
++ TVI + G A K F + + + + + ++++ + ++ + MF
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
K + P+ T LI CK +++ A V ++M G+ PN+VT+T + G G+
Sbjct: 409 LVK-GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I+ A + ++ +G P+ TY +++G K+G + VK+M+EM+ G P+ +TY
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++A+CK + +A LL ML ++ P+ +++ C G +ED L + +L K
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
MP+ ++++ C + + +++ +RG +P TYN LI G C++ + EA
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +MVEKG TY+ LI+GF K E ++ EEM G K + + ++
Sbjct: 648 FLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVN 707
Query: 475 YESGN 479
YE GN
Sbjct: 708 YEEGN 712
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 2/271 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++ L + D LL E+ + ++ + T++ G E VK
Sbjct: 451 NVVTYTALADGLCKNGEIDVANELLHEMSRK-GLQPNVYTYNTIVNGLCKIGNIEQTVKL 509
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + TL++A + H + + +K ++ P + T N+L+ C
Sbjct: 510 MEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK-RLQPTLVTFNVLMNGFC 568
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+E R+++ M G++PN T +++ Y + ++ ++ + DRG +PD+
Sbjct: 569 MSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSN 628
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+ G+ K + +A + EM + G TY +I F K KK EAR L ++M
Sbjct: 629 TYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
+ V + +D+ EEG E EL
Sbjct: 689 RKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H V+P+ T NILIK CK +++ A + EM G T+ ++ G+ R
Sbjct: 619 HDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKF 678
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
A+++F ++ G V + Y + +D + G +++ DE
Sbjct: 679 VEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEF 723
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 211/426 (49%), Gaps = 38/426 (8%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ TVI + G + T+ + + +V + N+++ AL + + D + +
Sbjct: 91 YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVL-TTM 149
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K V+P+ T N ++ C + AI L +M S G+ P++VT+ +++ G
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+++F + RG P+ TTY L+ GY G L + ++D M NG+ PN + ++
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ A+ K +K EA + M Q+ P++ VI +LC+ G+VEDA +++++ +
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329
Query: 357 MPDNAISSTIIHWL-----------------------------------CKEGKIWEAKK 381
P N + +++IH L CKEG++ E++K
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LFD R G P ++TY+TLI G C + ++ EA +L MV G++P+ TY+ LI G+C
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESD 499
KI K+ + + EM G P+ +++++++GL+++ ++ T SG +E
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELS 509
Query: 500 SWNFLL 505
++N +L
Sbjct: 510 TYNIIL 515
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 240/522 (45%), Gaps = 48/522 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-AV 97
P + +++ F++ +LD Y S N TY+SII L +A+ D A+
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYST--YNEMLDQRISPNVVTYNSIIAALCKAQTVDKAM 143
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E L T +K C + +++ + +G+P+ A+ ++ V+ V + N+L++
Sbjct: 144 EVLTTMVKSGVMPDC--MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 201
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L +N R +F +S K + P + T L++ K + +LD M G+
Sbjct: 202 YLCKNGRCTEARKIF-DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 260
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN + ++ Y + +E A VF + +G P+A TY ++ K GR+ DA+
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++M D G+ P + Y +I C K A L+ +ML R ++ +ID C+
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
EG+V ++ +L+ ++R PD ST+I C GK+ EA KL G P +T
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK-----------IGNA 445
Y+TLI G C+ + + +A L+ +M GV P++ TYN+++QG + +G
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500
Query: 446 KEGIRILE----EMLDKGCFPNK---------------------TSFSLLIEGLYESGNE 480
K G R LE ++ G NK +F+++I+ L + G
Sbjct: 501 KSG-RQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559
Query: 481 GEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDEL 522
E K + +A +S + + W + R++++ G G L+EL
Sbjct: 560 DE-AKDLFVAFSSNGLVPNYWTY---RLMAENIIGQGLLEEL 597
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 168/351 (47%), Gaps = 8/351 (2%)
Query: 149 VRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V S N LLN L R +L+H+M + P+V + + +I K+ D++
Sbjct: 51 VFSYNILLNGLCDENRSQEALELLHIMADDGG---DCPPDVVSYSTVINGFFKEGDLDKT 107
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+EM + PN+VT+ +I+ ++ A V ++ G +PD TY ++ G
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ G+ +A+ + +M +GVEP+ VTY +++ CK + EAR + D M +R P
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
++ +G + + L ++R P++ + S ++ K+ K+ EA +F
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ ++G P+ +TY +I +C+S + +A ++ M+++G+ P YN LI G C
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ ++ EMLD+G N F+ +I+ + G E K+ + G
Sbjct: 348 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 398
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 155/310 (50%), Gaps = 8/310 (2%)
Query: 173 KNSRHKF-----KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG--MVPNLVTHTT 225
+++RH F + +P+VF+ NIL+ LC ++ + A+ +L M G P++V+++T
Sbjct: 34 EDARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G+ GD++ + ++LD+ P+ TY ++ K + A++V+ M +G
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V P+ +TY ++ FC + EA L M P ++D LC+ G+ +A
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGM 404
+++ + ++ P+ T++ +G + E L D R I P+ ++ L+
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
+ ++ EA ++ M ++G+ PN TY +I CK G ++ + E+M+D+G P
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333
Query: 465 TSFSLLIEGL 474
++ LI GL
Sbjct: 334 IVYNSLIHGL 343
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 144/300 (48%), Gaps = 2/300 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I + CK+ V + ++ D M +G+ P+++T++T++ GY G ++ A ++
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G PD TY+ L++GY K+ R+ DA+ + EME +GV P+ +TY ++++ +
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+++ A+ L + + + ++ LC+ +DA +++ L + +
Sbjct: 487 RRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 546
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I L K G+ EAK LF F G +P+ TY + + L E +L+ M +
Sbjct: 547 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 606
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G + N +++ + G L M+D+ F + S + L L G E
Sbjct: 607 NGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQE 665
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 378 EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE--PNVFTYNML 435
+A+ +FDE R IP + +YN L+ G+C+ EA L M + G + P+V +Y+ +
Sbjct: 35 DARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
I GF K G+ + EMLD+ PN +++ +I L ++ + +V++ SG
Sbjct: 95 INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 2/256 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I A D LL + + +K + T+I Y R + A+ F
Sbjct: 405 TYSTLIDGYCLAGKMDEATKLLASM-VSVGMKPDCVTYSTLINGYCKISRMKDALVLFRE 463
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E V + + N +L L Q +R ++ + + + T NI++ LCK
Sbjct: 464 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL-ELSTYNIILHGLCKNK 522
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A+R+ + M + T ++ + G + AK +F G VP+ TY
Sbjct: 523 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 582
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ + I G L + ++ MEDNG + ++ + + A L + ++
Sbjct: 583 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 642
Query: 320 KYVPSSALCCKVIDLL 335
+ ++ IDLL
Sbjct: 643 HFSLEASTASLFIDLL 658
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFT 187
R A + ++ I K Q + + N +L+ L +NK D MF+N K+ F
Sbjct: 488 RTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF- 546
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
NI+I AL K + A + S G+VPN T+ + + +G +E ++F +
Sbjct: 547 -NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 605
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D G D+ ++ ++ G +T A + +++ T + I+ GK
Sbjct: 606 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGK 662
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 211/438 (48%), Gaps = 26/438 (5%)
Query: 55 QNLDLALQIFHYAGKF-HPNFSHNYDTYHSIIHKLARARAFDAVES----LLTELKQNPE 109
Q DL + + Y+ +F + FS D ++ LAR F ++++ L + +K N
Sbjct: 149 QAFDLLIHV--YSTQFRNLGFSCAVDVFY----LLARKGTFPSLKTCNFXLSSLVKANEF 202
Query: 110 IKCGENL-------------FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
KC E F VI G+ E A++ F+++EK + +V + N ++
Sbjct: 203 EKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCII 262
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
N L QN R D K V PN+ T LI L K + + +LDEM G
Sbjct: 263 NGLCQNGRLDNA-FELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGF 321
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+V ++ GY G+IE A ++ ++ + P + T LM G+ K ++ A
Sbjct: 322 NPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAEN 381
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
++E+ +G+ + ++ CK + A ML R + PS L ++ LC
Sbjct: 382 ALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLC 441
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLL 395
++GK +A ELW RLL K S+ +IH LC GK+ EA ++ E ERG +
Sbjct: 442 KDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRI 501
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TYN LI G C ++ RL ++M ++G++P+++TYN L++G C +G + I++ +E
Sbjct: 502 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 561
Query: 456 LDKGCFPNKTSFSLLIEG 473
G N ++ +++EG
Sbjct: 562 KASGLISNIHTYGIMMEG 579
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 196/375 (52%), Gaps = 9/375 (2%)
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-----PNVFTCNILI 192
R K + R+ R + LL LV D HL + + F+++ + T N LI
Sbjct: 415 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHL--EATELWFRLLEKGSPASKVTSNALI 472
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC + A R++ EM G+ + +T+ ++ G+ G +E R+ ++ RG
Sbjct: 473 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQ 532
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L+ G +G+L DA+K+ DE + +G+ N TYG+M+E +CK + + NL
Sbjct: 533 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 592
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+++L +K +S + +I C+ G V A +L + + K +P+ A S++IH +C
Sbjct: 593 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCN 652
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + +AK L DE + G +P+++ Y LI G C+ ++ A W +M+ + PN FT
Sbjct: 653 IGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFT 712
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMA 490
Y ++I G+CK+GN ++ +L +M + G P+ ++++L G ++ + KV MA
Sbjct: 713 YTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMA 772
Query: 491 TASGSVESDSWNFLL 505
T V+ ++ L+
Sbjct: 773 TEGLPVDEITYTTLV 787
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 213/447 (47%), Gaps = 20/447 (4%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR------ 122
KFH ++ S++ + +AFD + + + +N C ++F + R
Sbjct: 126 KFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPS 185
Query: 123 ----NYGL-----AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN-KRYDLVHLMF 172
N+ L A E + F R+ V S ++NAL + K + + L
Sbjct: 186 LKTCNFXLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELFM 244
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K K + PNV T N +I LC+ ++ A + ++M G+ PNL T+ ++ G +
Sbjct: 245 K--MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 302
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+ + +++ G+ P+ + L+DGY K+G + A+K+ D M + P VT
Sbjct: 303 LNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 362
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+++ FCK + A N L+++L C V+ LC++ + A K +L
Sbjct: 363 LYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 422
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELT 411
+N P + + + ++ LCK+GK EA +L F E+GS S +T N LI G+C + +L
Sbjct: 423 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLP 482
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA R+ +M+E+G+ + TYN LI GFC G + R+ EEM +G P+ +++ L+
Sbjct: 483 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 542
Query: 472 EGLYESGNEGEVGKVVSMATASGSVES 498
GL G + K+ ASG + +
Sbjct: 543 RGLCNVGKLDDAIKLWDEFKASGLISN 569
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 140/260 (53%), Gaps = 1/260 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+++T N L++ LC ++ AI++ DE + G++ N+ T+ ++ GY IE+ +
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++L + ++ Y +++ + + G + A+++++ M+ G+ PN TY +I
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 650
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C +A++L+D+M + +VP+ +I C+ G+++ A W ++ N P+
Sbjct: 651 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 710
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I CK G + +A L + E G +P ++TYN L G C++ ++ A ++ D
Sbjct: 711 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 770
Query: 420 MVEKGVEPNVFTYNMLIQGF 439
M +G+ + TY L+ G+
Sbjct: 771 MATEGLPVDEITYTTLVHGW 790
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 1/249 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++R G+ + A+K + + + ++ + ++ + R + V +F K
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK- 599
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K+ N NI+IKA C+ +V A+++L+ M S G++PN T+++++ G G +E+A
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 659
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
K + ++ G+VP+ YT L+ GY KLG++ A EM + PN+ TY VMI+
Sbjct: 660 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 719
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+CK +A NLL M + VP + + C+ +++A ++ ++ + D
Sbjct: 720 YCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVD 779
Query: 360 NAISSTIIH 368
+T++H
Sbjct: 780 EITYTTLVH 788
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 111/233 (47%), Gaps = 4/233 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++ +A + VE+L EL + +++ ++ +I+ + G A++
Sbjct: 569 NIHTYGIMMEGYCKANRIEDVENLFNEL-LSKKMELNSIVYNIIIKAHCQNGNVAAALQL 627
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ + + + ++L++ + D HL+ + + F VPNV LI
Sbjct: 628 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGF--VPNVVCYTALIGGY 685
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++ A EM S + PN T+T ++ GY G++E A + + + G VPD
Sbjct: 686 CKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDV 745
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
TY VL +G+ K + +A KV D+M G+ +E+TY ++ + +G+
Sbjct: 746 VTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWNPPTITGQ 798
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 228/496 (45%), Gaps = 41/496 (8%)
Query: 26 LSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN------------ 73
LS P + Y K V F N ++IF Y K PN
Sbjct: 32 LSPAAQYPIAEEQAVYTYSKDSVGDRFIDLNTSRVVEIF-YNLKNEPNLAWSFFTQLKES 90
Query: 74 -FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG------------------- 113
F HN DTY ++I L R R ++SLL+E+ + E G
Sbjct: 91 GFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEG 150
Query: 114 --ENLFITV----IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
++ I V ++ Y G + A+ + ++ + S N L+N L+++ + D+
Sbjct: 151 EHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDM 210
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
++++ + + + PN +T I IKALC+K + E A+ V EM G+ PN VT +T +
Sbjct: 211 AVAIYRHLK-RLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G + + W D YT ++ G+ +L +A V +M + G+
Sbjct: 270 EGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIA 329
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ YG +I A+CK +A L +DM+ + + ++ LCE G + +
Sbjct: 330 PDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQ 389
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCE 406
+K D + + ++ LCK GK+ EA +L +E + R ++ Y TLIAG C
Sbjct: 390 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL 449
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+L +A ++++M E+G+EP++ TYN+L+ GF + G KE + +L+ + +G PN +
Sbjct: 450 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 509
Query: 467 FSLLIEGLYESGNEGE 482
+ +IEGL +G E
Sbjct: 510 HNRIIEGLCMAGKVKE 525
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 156/286 (54%), Gaps = 5/286 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NI++ ALCK VE A+ +L+EM M ++V +TT++ GY +G + +AK +F ++ +
Sbjct: 406 NIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 465
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG PD TY +L+ G+ + G +A++++D + G++PN T+ +IE C K E
Sbjct: 466 RGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKE 525
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L+ + + SA+ +D C+ A EL+ RL ++ + ++
Sbjct: 526 AEAFLNTLEDKCLENYSAM----VDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLS 581
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC EG+ +A L + + P+ + Y LI C ++ A ++D +VE+G+ P
Sbjct: 582 SLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITP 641
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+V TY M+I G+C++ +E I +M ++G P+ +++++++G
Sbjct: 642 DVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDG 687
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 134/256 (52%), Gaps = 21/256 (8%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+C L+ +LC + + + A+ +L+ M ++ + PN + + ++G + GD++ A+ VF +
Sbjct: 575 SCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDML 634
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++RG PD TYT++++GY ++ L +A + ++M++ G++P+ +TY V+++ K
Sbjct: 635 VERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLK 694
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
AR+L ++ S EE K+ DA W + PD + +
Sbjct: 695 -MARSL-------QFSKGS-----------EEEKM-DASPFWSEMKEMGIKPDVVCYTVL 734
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I CK + +A L+DE RG P ++TY L++ C ++ A L ++M KG+
Sbjct: 735 IDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGI 794
Query: 426 EPNVFTYNMLIQGFCK 441
EP+ ++L +G K
Sbjct: 795 EPDSRAMSVLHRGILK 810
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 176/416 (42%), Gaps = 58/416 (13%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMF 172
E L+ V+ G+ E AV+ ++ + V TL+ +Q K D + MF
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN-MF 460
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ + + + P++ T NIL+ + + A+ +LD + + G+ PN TH I+ G
Sbjct: 461 EEMKER-GIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCM 519
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL------------------------ 268
G ++ A+ + D+ Y+ ++DGY K
Sbjct: 520 AGKVKEAEAFLNTLEDKCL----ENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKS 575
Query: 269 -----------GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
G A+ +++ M VEPN++ YG +I AFC+ A+ + D ++
Sbjct: 576 CFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLV 635
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK----- 372
+R P +I+ C + +A +++ + + PD + ++ K
Sbjct: 636 ERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKM 695
Query: 373 ----------EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
E + +A + E E G P ++ Y LI C++ L +A L+D+M+
Sbjct: 696 ARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMI 755
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+G++P++ TY L+ C G+ I ++ EM KG P+ + S+L G+ ++
Sbjct: 756 ARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKA 811
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 210/468 (44%), Gaps = 85/468 (18%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++ + AGR AV+ F R+++F + + NT+L ALV + L+ L N
Sbjct: 140 FAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVI-LLALALYNRM 198
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
PN T N+L+ LCK+ A+++ DEM G++PN+ +T +L G I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG----------- 285
+ A ++ G + D+G +PD TY + G K+GR+ +A + + ++D G
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318
Query: 286 ------------------------VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ P+ V Y +MI + + +A + LD M ++ +
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGF 378
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
VP + V+ +LC+ G +E A L +L+ N + D+ + +I LCK G + EA +
Sbjct: 379 VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 382 LFDEF-ERGSIPSLLTYNTLIAG------------------------------------- 403
+FDE E G P+++TYN LI G
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVC 498
Query: 404 -----------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
MC+S ++ +A +L +++ GV P+V TYN LI G CK N +R+
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+E+ KG P++ ++ LI+GL + E + + SGS S S
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 185/400 (46%), Gaps = 27/400 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++ L A D LL +K + E + + GR A +
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP-DEVTYNAFLSGLCKVGRVNEAFQR 299
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ ++ ++ + L++ L Q +R+D +K + + P+V I+I+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER-NISPDVVLYTIMIRGCA 358
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E A+ LD M G VP+ + T+L GD+E A + ++L V D+T
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T T+++ G K G + +A+++ DEM ++G +P +TY +I+ F + + EAR L M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL-LRKNCMPDNAISSTIIHWLCKEGK 375
++ + L+ RL L N + D+ ++H +C+ G+
Sbjct: 479 -----------------------EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A KL + G +P ++TYNTLI G+C++ L A RL+ ++ KG+ P+ TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
LI G + + + + + +L G P+ + ++ ++ L
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSL 615
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 179/439 (40%), Gaps = 60/439 (13%)
Query: 74 FSHNYDTYHSIIHKLARARAFD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
F+ Y +I L +AR FD + E +P++ L+ +IR AGR
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV----LYTIMIRGCAEAGRI 363
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E A+ ++K NT+L L + + H + ++ + +V + T I
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL-RSEMLQNNLVLDSTTQTI 422
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG------ 244
+I LCK+ V+ A+++ DEM G P ++T+ ++ G+ G +E A+ +F
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482
Query: 245 ------------------------------------------DILDRGWVPDATTYTVLM 262
I+D G VPD TY L+
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+G K L AV++ E++ G+ P+E+TYG +I+ + + +A L ++LQ
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLL-RKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
PS ++ ++ LC K+ A LW L +K P + H ++G + + +
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662
Query: 382 LFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ E G I S Y + G+C+ +A R++ + E G++ +LI
Sbjct: 663 ELIKIDQEYGYISS-NPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Query: 440 CKIGNAKEGIRILEEMLDK 458
C N + I+ L K
Sbjct: 722 CWDRNLNAAVDIMLYALSK 740
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
D G ++ + L+ + GR DAV+ M++ P Y +++A
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALV 183
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
A L + M+ P+ A ++D LC++G DA +++ +L + MP+
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
I + ++ LC GKI EA +L ++G +P +TYN ++G+C+ + EA + +
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVML 303
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G + Y+ LI G + EG + ML++ P+ ++++I G E+G
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
VVP+V T N LI LCK +++GA+R+ E+ G+ P+ +T+ T++ G + +A
Sbjct: 531 VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV------------------------- 275
+F +IL G P + Y +M ++ +L+ A+
Sbjct: 591 MLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHK 650
Query: 276 KVMDEMEDNGVEP-----------NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
++ D D+GV + Y + + C+ +++ +A + + + +
Sbjct: 651 EIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDIT 710
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
A C +I+ LC + + A ++ L K+ + + + ++ WLC + +A+ L
Sbjct: 711 PACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%)
Query: 382 LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
L D G S + L+A + +A + + M E P F YN +++
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
G + + M+ GC PN+ ++++L++GL + G G+ K+
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV+ F ++ + + TL++ L++ R + ++F+N P++ N ++
Sbjct: 554 AVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS-GSSPSLSIYNSMM 612
Query: 193 KALCKKDDVEGAIRV-LDEMPSMGMVPNLVTHTTILGGY--VWRGDIENAKRVFGDILDR 249
++LC+ + AI + LD +P P V + + + G +++ R I
Sbjct: 613 RSLCRMKKLSQAINLWLDYLPKKYNFP--VESEVLANAHKEIEDGSLDDGVRELIKIDQE 670
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
+ YT+ + G ++ R DA+++ +++ G++ ++I C + A
Sbjct: 671 YGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+++ L + + S + +++ LC + +DA L R+
Sbjct: 731 VDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRM 772
>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 738
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 237/472 (50%), Gaps = 25/472 (5%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG--ENLF 117
ALQ + + + F+H +T I+ L R + +L + + + E+ F
Sbjct: 102 ALQFYRWVERAGL-FTHTPETTLKIVQILGRYSKLNHARCILFDDTRGGASRATVTEDAF 160
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+++I +YG AG + +VK F ++++ V R+V+S + L +++ RY ++ + N+
Sbjct: 161 VSLIDSYGRAGIVQESVKLFKKMKELGVDRTVKSYDALFKVILRRGRY-MMAKRYYNAML 219
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
V P T NIL+ + ++ A+R ++M S G++P++VT+ T++ GY +E
Sbjct: 220 NESVEPTRHTYNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVE 279
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+++F ++ R VP+ ++T ++ GY+ G++ DA+KV +EM+ GV+PN VT+ ++
Sbjct: 280 EAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQIDDALKVFEEMKGCGVKPNAVTFSTLL 339
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
C +K EAR++L +M++R P +A+ K++ C+ G ++ A ++ K ++R +
Sbjct: 340 PGLCDAEKMAEARDVLGEMVERYIAPKDNAVFMKLMSCQCKAGDLDAAGDVLKAMIRLSI 399
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI----------------PSLLTYNTL 400
+ +I CK +A+KL D+ I PS YN +
Sbjct: 400 PTEAGHYGVLIENFCKANLYDKAEKLLDKMIEKEIVLRQKNAYETELFEMEPS--AYNLM 457
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +CE +A + +++KGV+ +V ++N LI G K GN I++ M +G
Sbjct: 458 IGYLCEHGRTGKAETFFRQLMKKGVQDSV-SFNNLICGHSKEGNPDSAFEIIKIMGRRGV 516
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSD 511
+ S+ LLIE G + + SG + ES + ++ + D
Sbjct: 517 ARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDD 568
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 196/451 (43%), Gaps = 58/451 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I+ R + + E L E+K +I F T+++ Y AG+ + A+K F
Sbjct: 264 TYNTLINGYFRFKKVEEAEKLFVEMKGR-DIVPNVISFTTMLKGYVAAGQIDDALKVFEE 322
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF------KVVPNVFTCN---- 189
++ V+ + + +TLL L ++ + ++ V + +C
Sbjct: 323 MKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAVFMKLMSCQCKAG 382
Query: 190 -------------------------ILIKALCKKDDVEGAIRVLDEMPSMGMV------- 217
+LI+ CK + + A ++LD+M +V
Sbjct: 383 DLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDKMIEKEIVLRQKNAY 442
Query: 218 --------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
P+ + ++G G A+ F ++ +G V D+ ++ L+ G+ K G
Sbjct: 443 ETELFEMEPS--AYNLMIGYLCEHGRTGKAETFFRQLMKKG-VQDSVSFNNLICGHSKEG 499
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
A +++ M GV + +Y ++IE++ + + +A+ LD ML+ ++P S+L
Sbjct: 500 NPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYR 559
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFER 388
V++ L ++G+V+ A + K ++ K + + S ++ L G + EA ++
Sbjct: 560 SVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEALGRIHLLMLN 619
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P ++ L++ +CE + A +L D ++E+ + Y+ ++ G
Sbjct: 620 GCEPD---FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNA 676
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
IL ++L+KG + +S LI+ L + GN
Sbjct: 677 YSILCKILEKGGSTDWSSRDELIKSLNQEGN 707
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 7/271 (2%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F++ P+ + N++I LC+ A ++ G V + V+ ++ G+ G+ ++
Sbjct: 447 FEMEPSAY--NLMIGYLCEHGRTGKAETFFRQLMKKG-VQDSVSFNNLICGHSKEGNPDS 503
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + + RG DA +Y +L++ Y++ G DA +D M ++G P Y ++E
Sbjct: 504 AFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVME 563
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + A ++ M+++ + L KV++ L G VE+A L+ C P
Sbjct: 564 SLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEALGRIHLLMLNGCEP 623
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D ++ LC++ K A KL D ER I Y+ ++ + + + A +
Sbjct: 624 D---FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAYSIL 680
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
++EKG + + + LI+ + GN K+
Sbjct: 681 CKILEKGGSTDWSSRDELIKSLNQEGNTKQA 711
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 152/337 (45%), Gaps = 30/337 (8%)
Query: 57 LDLALQIFHYAGKFHPNF--SHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEI 110
L + + HY G NF ++ YD ++ K+ R +A E+ L E++ +
Sbjct: 397 LSIPTEAGHY-GVLIENFCKANLYDKAEKLLDKMIEKEIVLRQKNAYETELFEMEPS--- 452
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQ----NKRY 165
NL I + +G G+ E TF R + K VQ SV S N L+ + + +
Sbjct: 453 --AYNLMIGYLCEHGRTGKAE----TFFRQLMKKGVQDSV-SFNNLICGHSKEGNPDSAF 505
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+++ +M + V + + +LI++ +K + A LD M G +P + +
Sbjct: 506 EIIKIMGRRG-----VARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRS 560
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G ++ A RV ++++G + + +++ + G + +A+ + + NG
Sbjct: 561 VMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEALGRIHLLMLNG 620
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
EP+ + ++ C+ +K+ A LLD +L+R + ++ KV+D L GK +A
Sbjct: 621 CEPD---FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAY 677
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+ ++L K D + +I L +EG +A L
Sbjct: 678 SILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVL 714
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 196/339 (57%), Gaps = 6/339 (1%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+++ N+ + S NT++N L + KR + V L+ + + PN FT IL+ LCK+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCE--PNSFTYCILMDGLCKE 58
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
VE A+R+L EM G+ ++V ++T++ G+ +G ++ K +F ++L++G P+ Y
Sbjct: 59 GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+ L++G+ K G +A V+ M + G++P+ TY MI CK ++ +A +L D M +
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ PS+ +I+ LC+EG + DA ++++ +L K + +T+I LC GK+ E
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238
Query: 379 AKKLFDE-FERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A KLF E G+ P ++T+NT+I G+C+ L +A ++D M+E+G N+FT ++L
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHIL 298
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I + K G + + + + + G P+ T++S++I+G
Sbjct: 299 IGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGF 337
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 202/455 (44%), Gaps = 44/455 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
+Y++II+ L + + + LL E++ + C N F I GL GR E A++
Sbjct: 12 SYNTIINGLCKEKRLEKAVDLLVEMEGSS---CEPNSFTYCILMDGLCKEGRVEEAMRLL 68
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ ++ V +TL++ D +F K + PNV + LI CK
Sbjct: 69 GEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK-GISPNVVVYSCLINGFCK 127
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
K A VL M G+ P++ T+T ++GG G A +F + ++G P T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNG-------------------------------- 285
Y VL++G K G + DA K+ + M + G
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247
Query: 286 -----VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
VEP+ +T+ +I+ CK + +A + D M++R + C +I + G
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
++ A ELWKR+ + +P + S +I CK + AK LF + G P+L YNT
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+A +C+ + L +A RL+ +M E EP+ ++N++I G K G+ +L +M G
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
P+ ++S I L + G E ASG
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 170/385 (44%), Gaps = 44/385 (11%)
Query: 80 TYHSIIHKL---ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +I L RAR + L+TE + P N+ I + G G A K
Sbjct: 152 TYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS-TVTYNVLINGLCKEGCIGD---AFKI 207
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-PNVFTCNILIKAL 195
F + + + V S NTL+ L N + D +F + V P+V T N +I+ L
Sbjct: 208 FETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGL 267
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK+ ++ A+ + D M G NL T ++G Y+ G I+ A ++ + G VP +
Sbjct: 268 CKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSS 327
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TTY+V++DG+ K+ L A + M+ +G+ P Y ++ + CK
Sbjct: 328 TTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK------------- 374
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
E +E A L++ + NC PD + +I K G
Sbjct: 375 ----------------------ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412
Query: 376 IWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
I AK+L ++ ++ G P TY++ I + + ++ EA +D M+ G+ P+ Y+
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS 472
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKG 459
LI+GF +E I +L +M D G
Sbjct: 473 LIKGFGLNDEIEEVINLLRQMADMG 497
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 170/396 (42%), Gaps = 15/396 (3%)
Query: 3 RHLHQKITAPSCLLQSI---GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDL 59
R + + +C++ + G AR +L + P + L++ + ++ +
Sbjct: 144 RGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGD 203
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN-----PEIKCGE 114
A +IF +Y+++I L D L + L ++ P++
Sbjct: 204 AFKIFETM--LEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVIT-- 259
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
F TVI+ GR + AV+ + + + ++ + + L+ +++ D ++K
Sbjct: 260 --FNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKR 317
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
HK +VP+ T +++I CK + A + M G+ P L + T++
Sbjct: 318 V-HKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A+R+F ++ + PD ++ +++DG +K G + A +++++M+ G+ P+ TY
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYS 436
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
I K + EA+ D M+ P + + +I ++E+ L +++
Sbjct: 437 SFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADM 496
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+ D I+++I+ +LC + +L F S
Sbjct: 497 GVILDLEITNSILTFLCNSAEHLHVMELLPNFSSES 532
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 190/385 (49%), Gaps = 10/385 (2%)
Query: 107 NPEIKCGENLFITVIRNYGL-------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
N + G ++ + YG+ AGR +L + K + N LL L
Sbjct: 76 NRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGL 135
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP--SMGMV 217
+KR D + + VPNVF+ I++K LC ++ + A+ +L M G +
Sbjct: 136 CADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL 195
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN+V+++T+ G + GD + A + ++LDR +P+ TY+ ++ K + A++V
Sbjct: 196 PNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEV 255
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
D M NGV PN TY ++ FC + EA L+ M P+ +D LC+
Sbjct: 256 HDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCK 315
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
G+ +A +++ ++++ PD S+++H EG + E LFD + + P
Sbjct: 316 NGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYV 375
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+NTLI + ++ EA ++ M +G++PN TYN LI G+CKI + + + +EM+
Sbjct: 376 FNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMV 435
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEG 481
G PN +++++++GL+ +G G
Sbjct: 436 SNGVSPNFITYNIMLQGLFRTGRTG 460
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 7/283 (2%)
Query: 198 KDDVEGAIRVLDEMPSMG---MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
+D+ A+ + M G + P + T+ ++G G ++ G ++ +G+ +
Sbjct: 65 RDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVE 124
Query: 255 ATTYTVLMDGYIKLGRLTDAVK-VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ L+ G R DA+ V+ M + G PN ++ ++++ C +S EA LL
Sbjct: 125 PIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELL 184
Query: 314 DDMLQRK--YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
M +P+ V D L + G + A ++ +L + +P+ S+II LC
Sbjct: 185 HMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALC 244
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K + +A ++ D + G P+ TY +L+ G C S +LTEA + + M GVEPNV
Sbjct: 245 KGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVV 304
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
TY+ + CK G E +I M+ +G P+ T++S L+ G
Sbjct: 305 TYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHG 347
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 8/293 (2%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW---VPDATT 257
E A+ V DE+ G+ + + L V R + A F + G P T
Sbjct: 34 AEDALDVFDELLRRGIGAPIRSLNGALAD-VARDNPAAAVSRFNRMARAGASMVTPTVHT 92
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL-LDDM 316
Y +L+ GRL + + G + + +++ C K++ +A ++ L M
Sbjct: 93 YGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGM 152
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAISSTIIHWLCKEG 374
+ VP+ ++ LC E + ++A EL + C+P+ ST+ L K G
Sbjct: 153 TELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGG 212
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+A + E +R +P+++TY+++IA +C+ + +A + D MV+ GV PN FTY
Sbjct: 213 DPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYT 272
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
L+ GFC G E I+ LE+M G PN ++S ++ L ++G E K+
Sbjct: 273 SLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 134/303 (44%), Gaps = 45/303 (14%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL---VH-LMFKNSRHKFKVV 182
G P+ A T+ + + +V + ++++ AL + + D VH M KN V
Sbjct: 211 GGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNG-----VT 265
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN FT L+ C + AI+ L++M S G+ PN+VT+++ + G A+++
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ RG PD TTY+ L+ GY G L + + D M + ++P+ + +I A K
Sbjct: 326 FYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAK 385
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+GKV++A ++ ++ + P+
Sbjct: 386 -----------------------------------QGKVDEAMLVFSKMRHQGLKPNCVT 410
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ CK ++ A LF E G P+ +TYN ++ G+ + A + ++
Sbjct: 411 YNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQII 470
Query: 422 EKG 424
+ G
Sbjct: 471 KSG 473
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 254/521 (48%), Gaps = 23/521 (4%)
Query: 28 TITVTPPIKPWPQRLYPKRLVSM----IFRQ-QNLDLALQIFHYAGKFHPN-FSHNYDTY 81
TI KPW L S+ +F+ +++ + + F + H FSHN TY
Sbjct: 61 TIANLINYKPWSDELLSSFTTSLSKTTVFQTLRHIKVPTKAFLFFNWIHEKGFSHNPQTY 120
Query: 82 HSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
++ L R + + + L E + N E+K + F ++IR+YG AG + +VK F
Sbjct: 121 FIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFEN 180
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ V V + N++L L++ R ++ ++ + V P+ +T NILI+ CK
Sbjct: 181 MKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNS 240
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD--RGWVPDATT 257
V+ EM S P++VT+ T++ G G I+ A + + + PD T
Sbjct: 241 MVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVT 300
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT L+ GY + + +A+ +++EM G++PN VTY +I+ C+ +K + + +L+ M
Sbjct: 301 YTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMK 360
Query: 318 -QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+P + +I+ C G +++A ++++ + + D+A S +I LC++G
Sbjct: 361 GDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDY 420
Query: 377 WEAKKLFDE-FER-------GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
+A+ LFDE FE+ G P +Y + +CE+ + +A R+ ++++G + +
Sbjct: 421 GKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ-D 479
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV- 487
+Y ++I G CK G+ + G +L ML + P+ + LI+G + +
Sbjct: 480 PLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLE 539
Query: 488 SMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKN 526
M +S ++ +W+ +L R++ + AG + +L +N
Sbjct: 540 KMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERN 580
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 180/443 (40%), Gaps = 49/443 (11%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R+Q +D AL I N TY+++I L A+ +D ++ +L ++K +
Sbjct: 310 RKQEVDEALDILEEMN--GRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIP 367
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
F T+I ++ AG + A K F ++
Sbjct: 368 DACTFNTLINSHCCAGNLDEAFKVFENMK------------------------------- 396
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-------PSMGMVPNLVTHTT 225
K +V + + ++LI+ LC+K D A + DE+ S G P ++
Sbjct: 397 -----KLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKC 451
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+ G + A+RV ++ RG D +Y +++ G+ K G + ++ M
Sbjct: 452 MFQYLCENGKTKKAERVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRD 510
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
P+ Y +I+ F + K A+ L+ ML+ Y P ++ +++ L E+G V ++
Sbjct: 511 FLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESA 570
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMC 405
+ +L +N + S+ + L G +A K+ + + + + ++ +C
Sbjct: 571 GVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGF--CVKMDEVVQFLC 628
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
EA +L ++ ++ N++I CK+ A E + E++DKG +
Sbjct: 629 NKRRALEACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGLHQDLI 688
Query: 466 SFSLLIEGLYESGNEGEVGKVVS 488
+ L+ L E+G E +S
Sbjct: 689 CLNDLVAAL-EAGGRTEEAAFIS 710
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 210/468 (44%), Gaps = 85/468 (18%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++ + AGR AV+ F R+++F + + NT+L ALV + L+ L N
Sbjct: 140 FAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVI-LLALALYNRM 198
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
PN T N+L+ LCK+ A+++ DEM G++PN+ +T +L G I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG----------- 285
+ A ++ G + D+G +PD TY + G K+GR+ +A + + ++D G
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318
Query: 286 ------------------------VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ P+ V Y +MI + + +A + LD M ++ +
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGF 378
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
VP + V+ +LC+ G +E A L +L+ N + D+ + +I LCK G + EA +
Sbjct: 379 VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 382 LFDEF-ERGSIPSLLTYNTLIAG------------------------------------- 403
+FDE E G P+++TYN LI G
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVR 498
Query: 404 -----------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
MC+S ++ +A +L +++ GV P+V TYN LI G CK N +R+
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+E+ KG P++ ++ LI+GL + E + + SGS S S
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 205/450 (45%), Gaps = 28/450 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++ L A D LL +K + E + + GR A +
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP-DEVTYNAFLSGLCKVGRVNEAFQR 299
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ ++ ++ + L++ L Q +R+D +K + + P+V I+I+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER-NISPDVVLYTIMIRGCA 358
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E A+ LD M G VP+ + T+L GD+E A + ++L V D+T
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T T+++ G K G + +A+++ DEM ++G +P +TY +I+ F + + EAR L M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 317 -------------LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
L V S K++ +C+ G+V A +L + ++ +PD
Sbjct: 479 EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTY 538
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+T+I+ LCK + A +LF E + +G P +TY TLI G+ + +A L+ ++++
Sbjct: 539 NTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G P++ YN +++ C++ + I + + L P K +F + E L + E E
Sbjct: 599 SGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYL-----PKKYNFPVESEVLANAHKEIE 653
Query: 483 VG-------KVVSMATASGSVESDSWNFLL 505
G +++ + GS+ S+ + L
Sbjct: 654 DGSLDDGVRELIKIDQEYGSISSNPYTIWL 683
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 180/439 (41%), Gaps = 60/439 (13%)
Query: 74 FSHNYDTYHSIIHKLARARAFD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
F+ Y +I L +AR FD + E +P++ L+ +IR AGR
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV----LYTIMIRGCAEAGRI 363
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E A+ ++K NT+L L + + H + ++ + +V + T I
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL-RSEMLQNNLVLDSTTQTI 422
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG------ 244
+I LCK+ V+ A+++ DEM G P ++T+ ++ G+ G +E A+ +F
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482
Query: 245 ------------------------------------------DILDRGWVPDATTYTVLM 262
I+D G VPD TY L+
Sbjct: 483 NPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+G K L AV++ E++ G+ P+E+TYG +I+ + + +A L ++LQ
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLL-RKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
PS ++ ++ LC K+ A LW L +K P + H ++G + + +
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662
Query: 382 LFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ E GSI S Y + G+C+ +A R++ + E G++ +LI
Sbjct: 663 ELIKIDQEYGSISSN-PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Query: 440 CKIGNAKEGIRILEEMLDK 458
C N + I+ L K
Sbjct: 722 CWDRNLNAAVDIMLYALSK 740
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
D G ++ + L+ + GR DAV+ M++ P Y +++A
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALV 183
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
A L + M+ P+ A ++D LC++G DA +++ +L + MP+
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
I + ++ LC GKI EA +L ++G +P +TYN ++G+C+ + EA + +
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVML 303
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G + Y+ LI G + EG + ML++ P+ ++++I G E+G
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 137 FLRIE-KFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
FLR+ N R SL L++ + Q+ K Y L+ + + VVP+V T N L
Sbjct: 487 FLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG-----VVPDVVTYNTL 541
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LCK +++GA+R+ E+ G+ P+ +T+ T++ G + +A +F +IL G
Sbjct: 542 INGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601
Query: 252 VPDATTYTVLMDGYIKLGRLTDAV-------------------------KVMDEMEDNGV 286
P + Y +M ++ +L+ A+ ++ D D+GV
Sbjct: 602 SPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGV 661
Query: 287 --------EPNEVT---YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
E ++ Y + + C+ +++ +A + + + + A C +I+ L
Sbjct: 662 RELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
C + + A ++ L K+ + + + ++ WLC + +A+ L
Sbjct: 722 CWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%)
Query: 382 LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
L D G S + L+A + +A + + M E P F YN +++
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
G + + M+ GC PN+ ++++L++GL + G G+ K+
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV+ F ++ + + TL++ L++ R + ++F+N P++ N ++
Sbjct: 554 AVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS-GSSPSLSIYNSMM 612
Query: 193 KALCKKDDVEGAIRV-LDEMPSMGMVPNLVTHTTILGGY--VWRGDIENAKRVFGDILDR 249
++LC+ + AI + LD +P P V + + + G +++ R I
Sbjct: 613 RSLCRMKKLSQAINLWLDYLPKKYNFP--VESEVLANAHKEIEDGSLDDGVRELIKIDQE 670
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
+ YT+ + G ++ R DA+++ +++ G++ ++I C + A
Sbjct: 671 YGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+++ L + + S + +++ LC + +DA L R+
Sbjct: 731 VDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRM 772
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 215/427 (50%), Gaps = 13/427 (3%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R +NLDLA +F K N TY ++I+ L D +L E+ + I+
Sbjct: 245 RNRNLDLAFGVFDRMVK--EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG-IEP 301
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LV 168
+ I E A++ R++K + +V++ L++ L + + + L
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
H M K +VPN T N LI LC A+++ M G + N T+ I+
Sbjct: 362 HKMLKEG-----LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G GDIE A +F +L G +P TY L++GY+ G + +A +++D M++NG EP
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+E TY ++ F K K A +M++ P+ +ID ++GKV+ A L
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
KR+ C P+ + +I+ L KE + EA+K+ D+ E+G +P+++TY TLI G+C +
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRN 596
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
A +++ DM ++ PN++TY+ LI G C+ G A E +L+EM KG P++ +F
Sbjct: 597 GRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTF 656
Query: 468 SLLIEGL 474
+ LI+G
Sbjct: 657 TSLIDGF 663
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 190/359 (52%), Gaps = 2/359 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +I G+ E+A+ + ++ K + + + N L+N L R+ +F +
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF-HWM 399
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ N T N +IK LC D+E A+ + ++M MG +P +VT+ T++ GY+ +G++
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
NA R+ + + G PD TY L+ G+ K G+L A EM + G+ PN V+Y +
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ K K A +LL M + P+ VI+ L +E + +A ++ +++ +
Sbjct: 520 IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGR 415
+P+ +T+I LC+ G+ A K+F + E R +P+L TY++LI G+C+ + EA
Sbjct: 580 LPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEI 639
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +M KG+ P+ T+ LI GF +G +L M+D GC PN ++S+L++GL
Sbjct: 640 LLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 226/452 (50%), Gaps = 33/452 (7%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
+K +L + ++ ++ + +Q F++ K P + HN + + S++++L R R F
Sbjct: 66 LKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISK-RPFYKHNMNCFISMLNRLVRDRVF 124
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL-RIEKFNVQRSVRSLN 153
+ + L I RN R V FL I S+ S N
Sbjct: 125 APADHIRI-------------LMIKACRNEEEIRR----VADFLNEISGMGFGFSLYSCN 167
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRV 207
TLL +Q ++++V + +R+ +K + P++ T N LI L KK V A +
Sbjct: 168 TLL---IQLAKFEMV----EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 220
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L ++ + P++ T+T+++ G+ +++ A VF ++ G P++ TY+ L++G
Sbjct: 221 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 280
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GR+ +A+ +++EM + G+EP TY + I A C + EA L+ M +R P+
Sbjct: 281 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I L GK+E A L+ ++L++ +P+ + +I+ LC G+ A K+F E
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400
Query: 388 -RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
GS+ + TYN +I G+C ++ +A L++ M++ G P V TYN LI G+ GN
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
R+L+ M + GC P++ +++ L+ G + G
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 195/441 (44%), Gaps = 41/441 (9%)
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
++T +I+ K + R + + S + + +P++ +L + RN L +LA F
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL----DLAFGVF 256
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ K + + +TL+N L R D M + K + P V+T + I ALC
Sbjct: 257 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPITALCA 315
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E AI ++ M G PN+ T+T ++ G G +E A ++ +L G VP+ T
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++ GR + A+K+ ME +G N TY +I+ C G +A L + ML
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ +P+ +I+ +G V +A L + C PD + ++ K GK+
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 378 EAKKLFDEF------------------------------------ERGSIPSLLTYNTLI 401
A F E E G P++ +YN +I
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ + +EA ++ D MVE+G+ PNV TY LI G C+ G + +I +M + C
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615
Query: 462 PNKTSFSLLIEGLYESGNEGE 482
PN ++S LI GL + G E
Sbjct: 616 PNLYTYSSLIYGLCQEGKADE 636
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 182/366 (49%), Gaps = 3/366 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++I L+R + L ++ + + + +I + GR A+K
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP-NTVTYNALINELCVGGRFSTALKI 395
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E + ++ N ++ L + ++F+ K +P V T N LI
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML-KMGPLPTVVTYNTLINGYL 454
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +V A R+LD M G P+ T+ ++ G+ G +E+A F ++++ G P+
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+YT L+DG+ K G++ A+ ++ ME+ G PN +Y +I K + EA + D M
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P+ +ID LC G+ + A +++ + ++ C+P+ S++I+ LC+EGK
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA+ L E ER G P +T+ +LI G + A L MV+ G +PN TY++L
Sbjct: 635 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVL 694
Query: 436 IQGFCK 441
++G K
Sbjct: 695 LKGLQK 700
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 163/382 (42%), Gaps = 39/382 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S + R L++A+ ++H K N TY+++I++L F + ++
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLK--EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----N 162
+ + + +I+ L G E A+ F ++ K +V + NTL+N + N
Sbjct: 402 HGSL-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460
Query: 163 KRYDLVHLMFKN------------------------SRHKFKVV------PNVFTCNILI 192
L+ LM +N + F+ + PN + LI
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K V+ A+ +L M MG PN+ ++ ++ G A+++ ++++G +
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TYT L+DG + GR A K+ +ME PN TY +I C+ K+ EA L
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 640
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M ++ P +ID G+++ A L +R++ C P+ S ++ L K
Sbjct: 641 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Query: 373 EGKIWEAK--KLFDEFERGSIP 392
E + E K L D + G P
Sbjct: 701 ECLLLEEKIFPLVDNYFLGCNP 722
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+I +I G+ + L+ K + A + +M ++G++P+ +T+
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I K K EA +L + Q P +I C ++ A ++ R++++
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 262
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
C P++ ST+I+ LC EG++ EA + +E E+G P++ TY I +C EA
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L M ++G PNV TY LI G ++G + I + +ML +G PN +++ LI
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382
Query: 474 LYESGNEGEVGKVVSMATASGSV 496
L G K+ GS+
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSL 405
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 187/351 (53%), Gaps = 2/351 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R E A F + S+ LL A +RY+ V + F + + ++++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISHDLYSF 109
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
ILI C+ + A+ VL +M +G P++VT ++L G+ I +A + ++
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G+ P+ Y L+DG K G L A+++++EME G+ + VTY ++ C + +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L DM++R P +ID+ ++G +++A EL+K +++ + P+N ++II+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC G++++AKK FD +G P+++TYNTLI+G C+ + E +L+ M +G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++FTYN LI G+C++G + + I M+ + P+ + +L+ GL +G
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 186/385 (48%), Gaps = 10/385 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMF 172
F +I + R A+ ++ K + S+ + +LL+ R + LV LM
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K+ PNV N LI LCK ++ A+ +L+EM G+ ++VT+ T+L G +
Sbjct: 169 KSGYE-----PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G +A R+ D++ R PD T+T L+D ++K G L +A ++ EM + V+PN VT
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I C + +A+ D M + P+ +I C+ V++ +L++R+
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELT 411
+ D +T+IH C+ GK+ A +F R P ++T+ L+ G+C + E+
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A +DDM E + YN++I G CK ++ + + +G P+ +++++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 472 EGLYESGNEGEVGKVVSMATASGSV 496
GL ++G E +++ G +
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 133/267 (49%), Gaps = 1/267 (0%)
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G++ E+A +F +++ +P +T L+ L R + +ME G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ ++ ++I FC+ + A ++L M++ Y PS ++ C ++ DA L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCES 407
+++ P+ + +T+I LCK G++ A +L +E E+ + + ++TYNTL+ G+C S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
++A R+ DM+++ + P+V T+ LI F K GN E + +EM+ PN ++
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ +I GL G + K + + G
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKG 311
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 166/383 (43%), Gaps = 11/383 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELK 105
L+ R L AL + K + + T+ S++H R DA ++ +K
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKL--GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 106 QN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P + L + +N G +A++ +EK + V + NTLL L +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKN----GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
R+ M ++ + + P+V T LI K+ +++ A + EM + PN VT+
Sbjct: 226 RWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+I+ G G + +AK+ F + +G P+ TY L+ G+ K + + +K+ M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G + TY +I +C+ K A ++ M+ R+ P C ++ LC G++E
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIA 402
A + + + +IH LCK K+ +A +LF G P TY +I
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 403 GMCESAELTEAGRLWDDMVEKGV 425
G+C++ EA L M E+G+
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI 487
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 193/375 (51%), Gaps = 3/375 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F R+ + + LL A+V+ Y +F + K + P++ T ILI
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK-GISPSIATFTILI 97
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ A +L + G PNLVT TI+ G+ G I A ++L +G++
Sbjct: 98 NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
D TY L++G K G++ A+ ++ EME + V+PN V Y +I+ CK +A L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ +R + + +ID C G+ ++ +L +++R+N PD+ + +I LCK
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG+I EA+ + +RG P ++TYN L+ G C + EA L++ MV++G+EP+V
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MA 490
YN+LI G+CK E + + +E+ +K P S++ LI+GL SG V K++ M
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397
Query: 491 TASGSVESDSWNFLL 505
++ + ++N L+
Sbjct: 398 GSAQPPDVVTYNILI 412
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 198/397 (49%), Gaps = 5/397 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I+ L++ A LL E++++ ++ ++ +I G A+ +
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQ 220
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
I + + + N+L++ R+ ++ L+ K R V P+ +T NILI ALCK+
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN--VDPDDYTFNILIDALCKE 278
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A VL M G P++VT+ ++ GY R ++ A+ +F ++ RG PD Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
VL+DGY K + +A+ + E+ + + P +Y +I+ C + + LLD+M
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC+EG++ +A + +++K P+ + ++ C +
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AK +F+ + + P +L YN LI G C++ + EA L+ +M K + P++ +YN LI
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G C +G +L+EM D G P+ ++++L++
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 1/364 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + F R+ K ++ V + N L++ + K D ++FK +K +VP + + N LI
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-NLVPTIASYNSLI 377
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC + ++LDEM P++VT+ ++ G I A V ++ +G
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +MDGY + A + + M +G+EP+ + Y V+I +CK + EA L
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M + +P A +ID LC G++ EL + PD + ++ CK
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557
Query: 373 EGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+A LF + G P T + ++ +C+ +L A ++ G PNV TY
Sbjct: 558 TQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+LI CK G+ E + +L +M D P+ +F ++I L + + K+ A
Sbjct: 618 TILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIA 677
Query: 493 SGSV 496
G V
Sbjct: 678 RGLV 681
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 146/309 (47%), Gaps = 2/309 (0%)
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ +V+ A+ + M + P +LG V G A +F + +G P
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+T+L++ Y A ++ + +G +PN VT+ +I FC +A + +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+L + Y+ +I+ L + G+++ A L + + + + P+ + S +I LCK+G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A L + ERG + +TYN+LI G C E +L MV + V+P+ +T+N+
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI CK G E +L M +G P+ +++ L+EG N E ++ + G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 495 SVESDSWNF 503
+E D N+
Sbjct: 331 -LEPDVLNY 338
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 210/468 (44%), Gaps = 85/468 (18%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++ + AGR AV+ F R+++F + + NT+L ALV + L+ L N
Sbjct: 140 FAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVI-LLALALYNRM 198
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
PN T N+L+ LCK+ A+++ DEM G++PN+ +T +L G I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG----------- 285
+ A ++ G + D+G +PD TY + G K+GR+ +A + + ++D G
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318
Query: 286 ------------------------VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ P+ V Y +MI + + +A + LD M ++ +
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGF 378
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
VP + V+ +LC+ G +E A L +L+ N + D+ + +I LCK G + EA +
Sbjct: 379 VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 382 LFDEF-ERGSIPSLLTYNTLIAG------------------------------------- 403
+FDE E G P+++TYN LI G
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVC 498
Query: 404 -----------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
MC+S ++ +A +L +++ GV P+V TYN LI G CK N +R+
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+E+ KG P++ ++ LI+GL + E + + SGS S S
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 185/400 (46%), Gaps = 27/400 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++ L A D LL +K + E + + GR A +
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP-DEVTYNAFLSGLCKVGRVNEAFQR 299
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ ++ ++ + L++ L Q +R+D +K + + P+V I+I+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER-NISPDVVLYTIMIRGCA 358
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E A+ LD M G VP+ + T+L GD+E A + ++L V D+T
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T T+++ G K G + +A+++ DEM ++G +P +TY +I+ F + + EAR L M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL-LRKNCMPDNAISSTIIHWLCKEGK 375
++ + L+ RL L N + D+ ++H +C+ G+
Sbjct: 479 -----------------------EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A KL + G +P ++TYNTLI G+C++ L A RL+ ++ KG+ P+ TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
LI G + + + + + +L G P+ + ++ ++ L
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSL 615
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 179/439 (40%), Gaps = 60/439 (13%)
Query: 74 FSHNYDTYHSIIHKLARARAFD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
F+ Y +I L +AR FD + E +P++ L+ +IR AGR
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV----LYTIMIRGCAEAGRI 363
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E A+ ++K NT+L L + + H + ++ + +V + T I
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL-RSEMLQNNLVLDSTTQTI 422
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG------ 244
+I LCK+ V+ A+++ DEM G P ++T+ ++ G+ G +E A+ +F
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482
Query: 245 ------------------------------------------DILDRGWVPDATTYTVLM 262
I+D G VPD TY L+
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+G K L AV++ E++ G+ P+E+TYG +I+ + + +A L ++LQ
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLL-RKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
PS ++ ++ LC K+ A LW L +K P + H ++G + + +
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662
Query: 382 LFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ E G I S Y + G+C+ +A R++ + E G++ +LI
Sbjct: 663 ELIKIDQEYGYISS-NPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Query: 440 CKIGNAKEGIRILEEMLDK 458
C N + I+ L K
Sbjct: 722 CWDRNLNAAVDIMLYALSK 740
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
D G ++ + L+ + GR DAV+ M++ P Y +++A
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALV 183
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
A L + M+ P+ A ++D LC++G DA +++ +L + MP+
Sbjct: 184 DSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVK 243
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
I + ++ LC GKI EA +L ++G +P +TYN ++G+C+ + EA + +
Sbjct: 244 IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVML 303
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G + Y+ LI G + EG + ML++ P+ ++++I G E+G
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
VVP+V T N LI LCK +++GA+R+ E+ G+ P+ +T+ T++ G + +A
Sbjct: 531 VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV------------------------- 275
+F +IL G P + Y +M ++ +L+ A+
Sbjct: 591 MLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHK 650
Query: 276 KVMDEMEDNGVEP-----------NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
++ D D+GV + Y + + C+ +++ +A + + + +
Sbjct: 651 EIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDIT 710
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
A C +I+ LC + + A ++ L K+ + + + ++ WLC + +A+ L
Sbjct: 711 PACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%)
Query: 382 LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
L D G S + L+A + +A + + M E P F YN +++
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
G + + M+ GC PN+ ++++L++GL + G G+ K+
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 98/223 (43%), Gaps = 8/223 (3%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV+ F ++ + + TL++ L++ R + ++F+N P++ N ++
Sbjct: 554 AVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS-GSSPSLSIYNSMM 612
Query: 193 KALCKKDDVEGAIRV-LDEMPSMGMVPNLVTHTTILGGY---VWRGDIENAKRVFGDILD 248
++LC+ + AI + LD +P P + +L + G +++ R I
Sbjct: 613 RSLCRMKKLSQAINLWLDYLPKKYNFP---VESEVLANAHKEIEDGSLDDGVRELIKIDQ 669
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+ YT+ + G ++ R DA+++ +++ G++ ++I C +
Sbjct: 670 EYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNA 729
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
A +++ L + + S + +++ LC + +DA L R+
Sbjct: 730 AVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRM 772
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 164/328 (50%), Gaps = 39/328 (11%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ FT IL++ LC+ + +E A ++L M MG VP+ + ++ GY D A +
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ +P TYT ++DG K GR DAVK++DEM D G PN TY V++E C+
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K EA+ +L++M R Y P I LC+ +V++A K L R PD
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA---RKFLARMPVTPDVVS 184
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ LCK G + A ++ D+ RG P ++TY++LI G C+ E+ A L D M+
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244
Query: 422 EKGVEPN-----------------------------------VFTYNMLIQGFCKIGNAK 446
+ G PN V +YN I G CK K
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ + + M+++GC PN +S+S+L+E L
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEEL 332
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 213/455 (46%), Gaps = 52/455 (11%)
Query: 64 FHYAGKFHPNFSHNY-----DTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLF 117
F A KF N+ TY +I+ L +A R DAV+ LL E++ C N++
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVK-LLDEMRDKG---CSPNIY 116
Query: 118 ITVIRNYGLAGRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+ GL +L A K + V + N+ + L + R D
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA-- 174
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ V P+V + +I LCK D++ A R+LD+M + G P++VT+++++ G+ G+
Sbjct: 175 --RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A + +L G P+ Y L+ +LG + A ++ EME G P+ V+Y
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSA--------LCCK----------------- 330
I+ CK ++ +A+ + D M++R P+++ LC K
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352
Query: 331 ----------VIDLLCEEGKVEDACELWKRLL-RKNCMPDNAISSTIIHWLCKEGKIWEA 379
++D LC+ G+ ++AC L+ ++L K C PD + ++ CK +I +A
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412
Query: 380 KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
++ + + +++T+N L+ G+C L++A + MV++G P+ TY L+
Sbjct: 413 LQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 472
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
CK G + + + EE + GC P+ ++S LI GL
Sbjct: 473 CKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 507
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 33/270 (12%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++D+ PDA T+ +L+ G + +L A +++ M++ G P++ Y +I + K K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
G+A L +M++ +P+ ++D LC+ G+ +DA +L + K C P+ +
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYN-------------------------- 398
I+ LC+E K+ EAKK+ +E RG P ++TYN
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180
Query: 399 ------TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
T+I G+C+S +L A R+ D M +G P+V TY+ LI GFCK G + + +L
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ ML GC PN +++ L+ L+ G+ G+
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGK 270
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 203/483 (42%), Gaps = 62/483 (12%)
Query: 14 CLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN 73
C + AR L+ + VTP + + +++ + + +LD A ++ +
Sbjct: 161 CKCDRVDEARKFLARMPVTPDVVSYTT------VINGLCKSGDLDSASRMLDQMT--NRG 212
Query: 74 FSHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
+ + TY S+I + RA ++S+L +L P + N + + G G+
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSML-KLGCRPNM-VAYNSLLGALHRLGHIGK 270
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
E + +E+ V S N ++ L + +R +F + PN + +
Sbjct: 271 AE---DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER-GCTPNASSYS 326
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+L++ LCKK +++ AI ++++ + +++ +T +L G G + A +F +LD
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386
Query: 250 GWV-PDATTYTVLMDGYIKL----------------------------------GRLTDA 274
PD Y V++D + K RL+DA
Sbjct: 387 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDA 446
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ M D G P+ VTYG +++A CK KS A L ++ ++ VP +I
Sbjct: 447 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 506
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
L E E+A L+ +L D A+ + +I + G KLF E + P+
Sbjct: 507 LVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPN 559
Query: 394 LLTYNTLIAGMCESAE-LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
T+ I+G AE L +A L+D V+ G P++F N LI F K G+ +E RI
Sbjct: 560 ARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619
Query: 453 EEM 455
M
Sbjct: 620 YSM 622
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 198/379 (52%), Gaps = 3/379 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R E A F + S+ LL A +RY+ V + F + + ++++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISHDLYSF 109
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
ILI C+ + A+ VL +M +G P++VT ++L G+ I +A + ++
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G+ P+ Y L+DG K G L A+++++EME G+ + VTY ++ C + +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L DM++R P +ID+ ++G +++A EL+K +++ + P+N ++II+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC G++++AKK FD +G P+++TYNTLI+G C+ + E +L+ M +G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKV 486
++FTYN LI G+C++G + + I M+ + P+ + +L+ GL +G E + K
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 487 VSMATASGSVESDSWNFLL 505
M + + ++N ++
Sbjct: 410 DDMRESEKYIGIVAYNIMI 428
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 217/449 (48%), Gaps = 21/449 (4%)
Query: 38 WPQRLYP-----------KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIH 86
W QRL P +R ++ R N + +L ++G H + H + + +H
Sbjct: 525 WMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSR-SFSGASHHH--HYRERLRNELH 581
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQ 146
+ FD SL E+ Q+ I + F V+ + ++ + + ++E +
Sbjct: 582 CIK----FDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNKFDIVIYLYHKMENLGIS 636
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ S L++ + R L + K P++ T L+ C+ + + A+
Sbjct: 637 HDLYSFTILIHCFCRCSRLSLALAL-LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 695
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
++D M G VPN+V + T++ G D+ NA VF + +G DA TY L+ G
Sbjct: 696 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 755
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
GR TDA +++ +M ++PN + + +I+ F K EARNL +M++R VP+
Sbjct: 756 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 815
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I+ C G + DA ++ ++ K C PD +T+I CK ++ + KLF E
Sbjct: 816 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875
Query: 387 E-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+G + TYNTLI G C++ +L A ++++ MV+ GV P++ TYN+L+ C G
Sbjct: 876 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 935
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ + ++E++ + +++++I+GL
Sbjct: 936 EKALVMVEDLQKSEMDVDIITYNIIIQGL 964
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 183/353 (51%), Gaps = 5/353 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ +L + + ++D+V ++ + + ++++ ILI C+ + A+ +
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLY-HKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT ++L G+ + A + + G+VP+ Y +++G K
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
L +A++V ME G+ + VTY +I + +A LL DM++RK P+
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EF 386
+ID +EG + +A L+K ++R++ +P+ +++I+ C G + +AK +FD
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P ++TYNTLI G C+S + + +L+ +M +G+ + FTYN LI G+C+ G
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
++ M+D G P+ ++++L++ L N G++ K + M E D
Sbjct: 902 VAQKVFNRMVDCGVSPDIVTYNILLDCL---CNNGKIEKALVMVEDLQKSEMD 951
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 186/385 (48%), Gaps = 10/385 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMF 172
F +I + R A+ ++ K + S+ + +LL+ R + LV LM
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K+ PNV N LI LCK ++ A+ +L+EM G+ ++VT+ T+L G +
Sbjct: 169 KSGYE-----PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G +A R+ D++ R PD T+T L+D ++K G L +A ++ EM + V+PN VT
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I C + +A+ D M + P+ +I C+ V++ +L++R+
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELT 411
+ D +T+IH C+ GK+ A +F R P ++T+ L+ G+C + E+
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A +DDM E + YN++I G CK ++ + + +G P+ +++++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 472 EGLYESGNEGEVGKVVSMATASGSV 496
GL ++G E +++ G +
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 207/446 (46%), Gaps = 11/446 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P + R++++I + D+ + ++H SH+ ++ +IH R
Sbjct: 599 RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL--GISHDLYSFTILIHCFCRCSRLS 656
Query: 96 AVESL---LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+L + +L P I +L + + R + AV ++ F +V
Sbjct: 657 LALALLGKMMKLGFRPSIVTLGSL----LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 712
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT++N L +N+ + +F K + + T N LI L A R+L +M
Sbjct: 713 NTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 771
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ PN++ T ++ +V G++ A+ ++ +++ R VP+ TY L++G+ G L
Sbjct: 772 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 831
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
DA + D M G P+ VTY +I FCK K+ + L +M + V + +I
Sbjct: 832 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 891
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP 392
C+ GK+ A +++ R++ PD + ++ LC GKI +A + ++ ++ +
Sbjct: 892 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 951
Query: 393 -SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
++TYN +I G+C + +L EA L+ + KGV+P+ Y +I G C+ G +E ++
Sbjct: 952 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1011
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYES 477
M + G P++ + + Y S
Sbjct: 1012 CRRMKEDGFMPSERIYDETLRDHYTS 1037
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 161/326 (49%), Gaps = 2/326 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P++ ++ + K + + I + +M ++G+ +L + T ++ + + A
Sbjct: 601 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 660
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ G ++ G+ P T L++G+ + R +AV ++D M+ G PN V Y +I C
Sbjct: 661 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 720
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + A + M ++ + +I L G+ DA L + ++++ P+
Sbjct: 721 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I KEG + EA+ L+ E R S+ P++ TYN+LI G C L +A ++D M
Sbjct: 781 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V KG P+V TYN LI GFCK ++G+++ EM +G + +++ LI G ++G
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900
Query: 481 GEVGKVVSMATASG-SVESDSWNFLL 505
KV + G S + ++N LL
Sbjct: 901 NVAQKVFNRMVDCGVSPDIVTYNILL 926
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 133/267 (49%), Gaps = 1/267 (0%)
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G++ E+A +F +++ +P +T L+ L R + +ME G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ ++ ++I FC+ + A ++L M++ Y PS ++ C ++ DA L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCES 407
+++ P+ + +T+I LCK G++ A +L +E E+ + + ++TYNTL+ G+C S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
++A R+ DM+++ + P+V T+ LI F K GN E + +EM+ PN ++
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ +I GL G + K + + G
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKG 311
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 156/348 (44%), Gaps = 5/348 (1%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
T+ S++H R DA ++ +K E ++ T+I G +A++
Sbjct: 143 TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV--VYNTLIDGLCKNGELNIALELLN 200
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+EK + V + NTLL L + R+ M ++ + + P+V T LI K+
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQ 259
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+++ A + EM + PN VT+ +I+ G G + +AK+ F + +G P+ TY
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ G+ K + + +K+ M G + TY +I +C+ K A ++ M+
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R+ P C ++ LC G++E A + + + +IH LCK K+ +
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
A +LF G P TY +I G+C++ EA L M E+G+
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 213/446 (47%), Gaps = 8/446 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+ L AL F +F + N TY+ +++ L +AR +L E++ +
Sbjct: 19 KANQLKQALACFEKMREF---VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAP 75
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
+ TVI + G + A + + + + V + ++++ L ++ + D M
Sbjct: 76 DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEM 135
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE-MPSMGMVPNLVTHTTILGGY 230
+ + K V P+ FT + LI C V+ A+++ E + S P++VT+T ++ G+
Sbjct: 136 VREMKLK-GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGF 194
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G++E A ++ G + R VP+ TY+ L+ G K G L A+ + M G PN
Sbjct: 195 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 254
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I C K AR L+D+M P + ++D C G++E+A +L+K
Sbjct: 255 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKE 314
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESA 408
+ K+C+PD + ++ C ++ EA+ L + + G P ++TY+ ++AG +
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
EA +M+ + V PN TY+ LI G CK G + +L+ M++K P+ +F+
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFN 434
Query: 469 LLIEGLYESGNEGEVGKVVSMATASG 494
+I L G+ E K++ A G
Sbjct: 435 SVIGALCRLGDMDEAWKLLVAMAAHG 460
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 207/424 (48%), Gaps = 10/424 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ ++I AR D L E+ + K + +I + +G E A+K
Sbjct: 150 TFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGV 209
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E +V + ++LL+ L + D +F+ K VPNV T LI LC
Sbjct: 210 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAH 268
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A ++DEM + P+ V++ +L GY G IE AK++F ++ + +PD TYT
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDN-GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ G+ RL +A +++ M+ G++P+ VTY +++ + + K+ EA + +M+
Sbjct: 329 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R P++ +ID LC+ G+V+ A E+ K ++ K P +++I LC+ G + E
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDE 448
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM----VEKGVEPNVF--- 430
A KL G P ++TY TL+ G + + A L++ M + N+
Sbjct: 449 AWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ 508
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
++ LI+G CK + + ++EE+ + C P + +++GL +G E GK+++
Sbjct: 509 AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
Query: 491 TASG 494
+ G
Sbjct: 569 SKVG 572
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 178/351 (50%), Gaps = 39/351 (11%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSM---------------------------- 214
P V T I+I CK + ++ A+ ++M
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVL 64
Query: 215 -------GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTVLMDGYI 266
+ P+LVT++T++ G+ +G+++ A + +++ R G PD TYT ++DG
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML-QRKYVPSS 325
+ G++ A +++ EM+ GVEP++ T+ +I +C +K EA L ++L + P
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ID C+ G +E A ++ + + C+P+ S+++H LCK G + +A LF
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+G +P+++TY TLI G+C + ++ A L D+M P+ +YN L+ G+C++G
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASG 494
+E ++ +EM K C P++ +++ L+ G + E ++ +M TA+G
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 355
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 140/248 (56%), Gaps = 5/248 (2%)
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P T+T+++DG+ K +L A+ ++M + V PNE TY V++ CK + + +A +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 313 LDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLL-RKNCMPDNAISSTIIHWL 370
L +M K V P VI+ C++G+++ ACE+ + ++ R PD ++++ L
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV-EPN 428
C++GK+ A ++ E + +G P T++ LI G C + ++ EA +L+ +++ +P+
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
V TY LI GFCK GN ++ +++L M + C PN ++S L+ GL ++G+ + +
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243
Query: 489 MATASGSV 496
T+ G V
Sbjct: 244 RMTSKGCV 251
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
C P + II CK ++ +A F++ P+ TYN ++ G+C++ ++A
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 416 LWDDMVE-KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK-GCFPNKTSFSLLIEG 473
+ +M + K V P++ TY+ +I GFCK G IL EM+ + G P+ +++ +++G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 474 LYESGNEGEVGKVVSMATASGSVESDSWNF 503
L G ++V G VE D + F
Sbjct: 123 LCRDGKMDRACEMVREMKLKG-VEPDKFTF 151
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 218/451 (48%), Gaps = 6/451 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+ + L P ++ ++ R N +L + F + + + SH++ TY+ ++ L +A ++
Sbjct: 69 FREHLTPSHVLEVVKRFNNPNLGFKFFRFTRE-RLSMSHSFWTYNMLLRSLCQAGLHNSA 127
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+ L ++ + ++ L ++ ++ LA R +++ + + VQ V N LN
Sbjct: 128 KLLYDSMRSDGQLP-DSRLLGFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNFLN 186
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L+++ R D +F+ + + FT NILI+ LC DV+ A +L +M S G
Sbjct: 187 ILIKHNRLDDAICLFRELMRSHSCL-DAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCS 245
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDI-LDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++VT+ +L G ++ A+ + ++ L + P+ +YT ++ GY +L ++ +A
Sbjct: 246 PDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASS 305
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ EM +G +PN T+ +++ F K A + +L P+ +I+ C
Sbjct: 306 LFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYC 365
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLL 395
G V +LW+ + +N + S +I LCK ++ EA+ L ++ I P
Sbjct: 366 RAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAF 425
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
YN +I G C+S + EA + +M EK +P+ T+ +LI G C G E I I +M
Sbjct: 426 VYNPVIDGYCKSGNIDEANAIVAEMEEK-CKPDKLTFTILIIGHCMKGRTPEAIGIFYKM 484
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
L GC P+ + L L +SG GE ++
Sbjct: 485 LASGCTPDDITIRTLSSCLLKSGMPGEAARI 515
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 170/362 (46%), Gaps = 4/362 (1%)
Query: 130 PELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
P L K F E+ ++ S + N LL +L Q ++ L++ + R ++ P+
Sbjct: 88 PNLGFKFFRFTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQL-PDSRLL 146
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
L+ + D + + +L E G+ +++ + L + +++A +F +++
Sbjct: 147 GFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMR 206
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
DA T+ +L+ G G + +A +++ +M G P+ VTY +++ C+ +
Sbjct: 207 SHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDR 266
Query: 309 ARNLLDDM-LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
AR+LL+++ L+ ++ P+ VI C K+++A L+ ++R P+ S ++
Sbjct: 267 ARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALV 326
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
K G + A + + G P+++T +LI G C + + LW +M + +
Sbjct: 327 DGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIP 386
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
N++TY++LI CK +E +L + P ++ +I+G +SGN E +
Sbjct: 387 ANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAI 446
Query: 487 VS 488
V+
Sbjct: 447 VA 448
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 148/328 (45%), Gaps = 2/328 (0%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F+ +R + + + +T N+L+++LC+ A + D M S G +P+ ++ +
Sbjct: 94 FFRFTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSF 153
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+ +K + + G D Y ++ IK RL DA+ + E+ + +
Sbjct: 154 ALADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDA 213
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
T+ ++I C EA LL DM P ++ LC +V+ A +L +
Sbjct: 214 FTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEE 273
Query: 351 LLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESA 408
+ K N +S +T+I C+ K+ EA LF E R G+ P++ T++ L+ G ++
Sbjct: 274 VCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAG 333
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
++ A + ++ G PNV T LI G+C+ G G+ + EM + N ++S
Sbjct: 334 DMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYS 393
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSV 496
+LI L +S E ++ + S V
Sbjct: 394 VLISALCKSNRLQEARNLLRILKQSDIV 421
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 224/463 (48%), Gaps = 27/463 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNL----DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RA 93
PQ P LV I + L ++ + F +A P F HN + + R
Sbjct: 46 PQLTPP--LVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRK 103
Query: 94 FDAVESLL-----TELKQNPEIKC------GENLFITVIRNYGLAGRPELAVKTFLRIEK 142
F +SLL T+ + + + + L T I Y +G+P A + F ++++
Sbjct: 104 FSDAKSLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKR 163
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVH-LMFK----NSRHKFKVVPNVFTCNILIKALCK 197
++ ++ + NTLLN+LV RY H + F N K +VPNV T NI+I C
Sbjct: 164 LRLRPNLLTCNTLLNSLV---RYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ + A+ L+ M P+ VT+ TIL +G + +A+ + D+ RG +P+ T
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNT 280
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +L+ GY K+G L +A V++ M N + P+ TY ++I C + EA L D+M
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
K +P +I+ E K+ +A +L + + K P+ + ++ W CKEGK+
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400
Query: 378 EAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A + E G P +TYNTLI G C++ + EA R D+M K ++ + T N ++
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ C+ +E ++L +G F ++ S+ LI G ++ GN
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 249/510 (48%), Gaps = 56/510 (10%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----EN 115
A QIF + N T +++++ L R + +V + N IK G N
Sbjct: 154 AFQIFKKMKRLR--LRPNLLTCNTLLNSLVRYPSSHSVS--FSREAFNDAIKLGIVPNVN 209
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY---------- 165
F VI Y L + + AV+ + K+N + NT+L+AL + R
Sbjct: 210 TFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDM 269
Query: 166 -----------------------------DLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+++ LM +N+ ++P+V+T N+LI LC
Sbjct: 270 KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN-----LLPDVWTYNMLINGLC 324
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E A ++ DEM ++ ++P++V++ T++ G + I A ++ ++ ++G P+A
Sbjct: 325 NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+ +++ Y K G++ DA + +ME++G P+ VTY +I +CK GEA +D+M
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ S ++ LC E K+E+A +L ++ D T+I K+G +
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A KL+DE E+ IPS +TYN +I G+C+ + +A ++++E G+ P+ TYN +
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG- 494
+ G+C+ G+ ++ + +M++ P+ + ++L+ GL G + K+ + + G
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGK 624
Query: 495 SVESDSWNFLLTRIVSD--LDSGAGALDEL 522
++++ ++N L+T + + LD L E+
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 211/473 (44%), Gaps = 40/473 (8%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
A++ + GK+ N S + TY++I+ L + LL ++K + N +
Sbjct: 227 AVEFLNVMGKY--NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLP-NRNTYNI 283
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++ Y G + A + + N+ V + N L+N L R + ++
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA-FKLRDEMENL 342
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K++P+V + N LI + + A ++L+EM G+ PN VTH ++ Y G +++A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ + G+ PD TY L++GY K G + +A + MDEM ++ + VT ++
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462
Query: 300 FCKGKKSGEARNLL-----------------------------------DDMLQRKYVPS 324
C+ KK EA LL D+M +++ +PS
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ +I LC+ GK E A LL +PD +TI+H C+EG + +A + +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 385 EFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ S P + T N L+ G+C L +A +L++ V KG + TYN LI CK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +L EM +K P+ +++ +I L +SG E + +S G +
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXL 695
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 178/380 (46%), Gaps = 27/380 (7%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHK 178
+++ Y G+ + A T ++E+ + NTL+N + + M + R
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
K+ + T N +++ LC++ +E A ++L G + V++ T++ GY G+++
Sbjct: 449 MKM--DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +++ ++ ++ +P TY ++ G + G+ A+ ++E+ ++G+ P+E TY ++
Sbjct: 507 ALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILH 566
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C+ +A + M++ + P C ++ LC EG +E A +L+ + K
Sbjct: 567 GYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAI 626
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D +T+I LCKEG++ +A L E E + P TYN +I + +S + EA
Sbjct: 627 DTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFM 686
Query: 418 DDMVEKGVEP-----------------------NVFTYNMLIQGFCKIGNAKEGIRILEE 454
M+EKG P + Y+ I+ C G K+ +RI E
Sbjct: 687 SKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGE 746
Query: 455 MLDKGCFPNKTSFSLLIEGL 474
KG +K+++ L++GL
Sbjct: 747 SKQKGITVDKSTYINLMDGL 766
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 136/351 (38%), Gaps = 92/351 (26%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y AG A +T + + N++ +LNT+L L + K+ + + + ++R
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 177 HK----------------FK------------------VVPNVFTCNILIKALCKKDDVE 202
+ FK ++P+ T N +I LC+ E
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR-------------VFG-DILD 248
AI L+E+ G++P+ T+ TIL GY GD+E A + VF +IL
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 249 RG----------------WVP-----DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
RG WV D TY L+ K GRL DA ++ EME+ +
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL-------------------- 327
P+ TY +I A + EA + ML++ +P L
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSS 720
Query: 328 ---CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ I LC EGK +DA ++ +K D + ++ L K K
Sbjct: 721 SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 29/289 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ F+ N+D AL+++ + + TY+ II L + + S L EL +
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKE--KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + E + T++ Y G E A + ++ + + + V + N LL L +
Sbjct: 552 SGLLP-DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLE 610
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+F K K + V T N LI +LCK+ ++ A +L EM + P+ T+ I
Sbjct: 611 KALKLFNTWVSKGKAIDTV-TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDAT-----------------------TYTVLMD 263
+ G I A+ +L++G +P Y+ +
Sbjct: 670 ITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIK 729
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK--SGEAR 310
G+ DA+++ E + G+ ++ TY +++ K +K S EAR
Sbjct: 730 ELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 207/427 (48%), Gaps = 47/427 (11%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLMFK 173
VI + R E A + R++ + + N ++ +L ++ L L+
Sbjct: 142 AVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD 201
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
N +P V T ILI+A + + A+++L+EM + G++P++ T+ I+ G
Sbjct: 202 N------CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G +E A + + +G PD +Y +L+ ++ G+ + K++ EM G EPN+VTY
Sbjct: 256 GMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 315
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++I + C+ + EA ++L M++++ P + +I LC+EG+++ A + ++
Sbjct: 316 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 375
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--------------------------- 386
C+PD +TI+ LCK G +A ++F++
Sbjct: 376 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 435
Query: 387 ---------ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+G P +TYN+LI+ +C + EA L DDM + G P V +YN+++
Sbjct: 436 ALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 495
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G CK+ + I + EM++KGC PN+T++ LLIEG+ +G E ++ + + +
Sbjct: 496 GLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVIS 555
Query: 498 SDSWNFL 504
DS+ L
Sbjct: 556 QDSFKRL 562
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 172/344 (50%), Gaps = 4/344 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+VF N +I CK + +E A +VL+ M + G +P++VT+ ++G R + A +V
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L +P TYT+L++ I G + +A+K+++EM G+ P+ TY +I CK
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A L+ + + P ++ +GK ++ +L + + C P+
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314
Query: 363 SSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC+ G+I EA + E+ P +Y+ LI+ +C+ L A + D M+
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G P++ YN ++ CK GNA + + I ++ GC PN +S++ +I L+ G+
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434
Query: 482 E-VGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDEL 522
+G V +M + + ++N L++ + D ++ G LD++
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDM 478
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 146/286 (51%), Gaps = 5/286 (1%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++++G+ PD T L+ G+ + A +VM+ +E + EP+ Y +I FCK +
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNR 152
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A +L+ M R ++P +I LC K+ A ++ +LL NCMP +
Sbjct: 153 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTI 212
Query: 366 IIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I EG I EA KL +E RG +P + TYN +I GMC+ + A L + KG
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+P+V +YN+L++ F G EG +++ EM +GC PNK ++S+LI L G E
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 332
Query: 485 KVVS-MATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
V+ M + ++ S++ L++ + + LD G +D ++ C
Sbjct: 333 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 149/318 (46%), Gaps = 13/318 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPE-LAVK 135
TY++II + + + L+T L P++ N+ + N G E L +
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSLTSKGCKPDV-ISYNILLRAFLNQGKWDEGEKLVAE 302
Query: 136 TFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F R E V S+ L+++L + R D + K K ++ P+ ++ + LI A
Sbjct: 303 MFSRGCEPNKVTYSI-----LISSLCRFGRIDEAISVLKVMIEK-ELTPDTYSYDPLISA 356
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK+ ++ AI ++D M S G +P++V + TIL G+ A +F + G P+
Sbjct: 357 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 416
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
++Y ++ G + A+ ++ M GV+P+E+TY +I C+ EA LLD
Sbjct: 417 VSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLD 476
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
DM Q + P+ V+ LC+ +++DA ++ ++ K C P+ +I + G
Sbjct: 477 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 536
Query: 375 KIWEAKKLFDE-FERGSI 391
EA +L + F R I
Sbjct: 537 WRTEAMELANSLFSRDVI 554
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 80/165 (48%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
K+++ C+ GK ++ + L+ K PD + + +I I +A ++ + E
Sbjct: 73 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH 132
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ P + YN +I+G C+ + A ++ + M +G P++ TYN++I C +
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++L+++L C P ++++LIE G E K++ A G
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
RIE ++R V N L+N + +R D + K P+ T + LI LC +
Sbjct: 109 RIELLRIERDVFHFNILINCFSRLQRVDFAFSVL-GKIIKLGFEPDAVTFSSLINGLCFE 167
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D A+ DEM + G PNL T+ TI+ G+ G A + + G PD Y
Sbjct: 168 DKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIY 227
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++DG K +++A+ + E++ GV P+ TY +++ C + EA L ++M+
Sbjct: 228 NTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMS 287
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+P ++D LC+EG + +A + K ++ K P+ A +++++ C + K++E
Sbjct: 288 LNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFE 347
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ +FD +G +P++++YN LI G C++ + EA L+D+M +G+ PN F YN LI
Sbjct: 348 ARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLIS 407
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G C+ G E + ++M +GC P+ + ++L++ L + G
Sbjct: 408 GLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLG 448
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 177/344 (51%), Gaps = 2/344 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ LL+ALV+ K Y V L ++ +VF NILI + V+ A VL ++
Sbjct: 87 FDKLLSALVRIKHYGTV-LSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKI 145
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G P+ VT ++++ G + A F +++ G+ P+ TY ++ G+ K+G+
Sbjct: 146 IKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKT 205
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
T AV ++ +M+ G P+ V Y +I+ CK + EA ++ ++ + P +
Sbjct: 206 TVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSIL 265
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGS 390
+ LC + E+A L+ ++ N MPD + ++ LCKEG + EA+ + E+G
Sbjct: 266 MHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+ TYN+L+ G C ++ EA ++D M+ KG PNV +YN+LI G+CK E
Sbjct: 326 EPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ +EM +G PN +++ LI GL ++G E ++ A G
Sbjct: 386 LFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 188/369 (50%), Gaps = 13/369 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR----ARAFDAVESLLT 102
L++ R Q +D A + K F + T+ S+I+ L ARA + + ++
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKL--GFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVA 182
Query: 103 ELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
Q P + + + T+I+ + G+ +AV +++K + + NT+++ L ++
Sbjct: 183 SGYQ-PNL----HTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ +F + K V P+VFT +IL+ LC D E A + +EM S+ ++P++VT
Sbjct: 238 RLVSEALDIFSEIKGK-GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
++ G + A+ + ++++G P+ TY LM+GY ++ +A V D M
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G PN V+Y ++I +CK ++ EAR L D+M R +P++ +I LC+ G+
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHC 416
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
+A EL+K + + C PD + ++ LCK G + A +LF + + P+L+TY+ LI
Sbjct: 417 EARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476
Query: 402 AGMCESAEL 410
M +S ++
Sbjct: 477 RAMYKSGKI 485
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 154/315 (48%), Gaps = 14/315 (4%)
Query: 67 AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRN 123
A + PN TY++II + LL ++ + P+I ++ T+I
Sbjct: 182 ASGYQPNLH----TYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIV----IYNTIIDG 233
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
A+ F I+ V+ V + + L++ L + + + +F N ++P
Sbjct: 234 LCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALF-NEMMSLNIMP 292
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+V T NIL+ LCK+ + A ++ M G+ PN T+ +++ GY + + A+ VF
Sbjct: 293 DVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVF 352
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ +G +P+ +Y +L++GY K R+ +A ++ DEM G+ PN Y +I C+
Sbjct: 353 DAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQA 412
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ EAR L DM + P C ++D LC+ G +++A L+ R ++ +C+ N ++
Sbjct: 413 GRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLF-RAMQDSCLKPNLVT 471
Query: 364 STI-IHWLCKEGKIW 377
I I + K GKI+
Sbjct: 472 YDILIRAMYKSGKIY 486
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 128/261 (49%), Gaps = 1/261 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+IE+A F ++ + +P + L+ +++ + + +E +E + +
Sbjct: 64 NIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I F + ++ A ++L +++ + P + +I+ LC E K A E + ++
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEA 413
P+ +TII CK GK A L + ++ G P ++ YNT+I G+C+ ++EA
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
++ ++ KGV P+VFTY++L+ G C +E + EM+ P+ +F++L++
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303
Query: 474 LYESGNEGEVGKVVSMATASG 494
L + G E ++ + G
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKG 324
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 204/409 (49%), Gaps = 19/409 (4%)
Query: 104 LKQNPEIKCG--ENLFITVIRNYGLAGRPELAVKTFLRIE------KFNVQRSVRSLNTL 155
L+ P+ +C E + TV+ AGR E AV+ F E + S+R N +
Sbjct: 235 LRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIV 294
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ L QN R D MF+ + V P+ ++ ILI L K + A + ++ G
Sbjct: 295 ILGLCQNDRIDEAVQMFEKMNER-NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG 353
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P+ V +T+++ G ++A+ +F D+ RG P TY V++D K G L +A
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEAC 413
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ +M ++G P+ VTY +++ CK + EA L ++M + P+ +I L
Sbjct: 414 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473
Query: 336 CEEGKVEDACE---------LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DE 385
C++ K++ AC+ L KR+ +PD ST+I LC ++ +A+ L D
Sbjct: 474 CQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 533
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+R P+++T NTLI G+C++ + EA + D MV G P+V TYN L+ G C+ G
Sbjct: 534 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 593
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ +L +M+ +G PN +++ L+ GL ++ E V + +SG
Sbjct: 594 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 642
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 196/442 (44%), Gaps = 38/442 (8%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLA 127
H + + Y S+IH L A +FD L ++ + P N+ I G+
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
+K IE +V V + NT+++ L ++ R + L+F N + PN +
Sbjct: 410 EEACDLIKKM--IEDGHVP-DVVTYNTVMDGLCKSSRVEEALLLF-NEMERLGCTPNRRS 465
Query: 188 CNILIKALCKKDDVEGA---------IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
N +I LC++ ++ A R+L M G VP++VT++T++ G +++
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ + D++ R P T L+ G K GR+ +A +V+D M +G P+ VTY ++
Sbjct: 526 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C+ ++ AR LL DM+ R P+ ++ LC+ ++ +AC ++ ++ C P
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESA------ELT 411
+ + +I C G++ KLF E I P + Y TL A +C+S E+
Sbjct: 646 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705
Query: 412 EAGR------LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
GR W D V Y + G + G + + + +M+ G P
Sbjct: 706 REGRESLRSEAWGDEV----------YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPE 755
Query: 466 SFSLLIEGLYESGNEGEVGKVV 487
+ L+ GL +SG GE V+
Sbjct: 756 RCASLVAGLCKSGQGGEARAVL 777
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 187/420 (44%), Gaps = 45/420 (10%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF +VI+ + GR AVK F +E+ + N L+++L + + + V M +
Sbjct: 12 LFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYP-DVYNVLIDSLSKRQETEAVKKMVQVM 70
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ P+ FT ++ LCK ++ A V+DEM S + P T + + RG
Sbjct: 71 VDR-GCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGS 129
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED------------ 283
+E A + +L+ V +++ Y +++ K R+ DA+++ M +
Sbjct: 130 MERAFQ----LLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDS 185
Query: 284 --------------------NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
N EP VT V++E FC + +AR LL M + P
Sbjct: 186 VLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAP 245
Query: 324 SSALCCKVIDLLCEEGKVEDACELW-KRLLRKNCMPDNAIS-----STIIHWLCKEGKIW 377
C V+D LC+ G+VE+A L+ R L + ++ + +I LC+ +I
Sbjct: 246 DEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRID 305
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA ++F++ ER P +Y LI G+ ++ +L +A L+ ++ GV P+ Y LI
Sbjct: 306 EAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI 365
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G C + + + +M +GC P+ +++++I+ + G E ++ G V
Sbjct: 366 HGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV 425
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 134/270 (49%), Gaps = 11/270 (4%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+ P + T+++ G+ G A ++F +++ P Y VL+D K +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIF-SLMEECHSPYPDVYNVLIDSLSKR-Q 58
Query: 271 LTDAVKVMDE-MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
T+AVK M + M D G P+ T+ ++ CK K EA ++D+M R P A
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+ LC G +E A +L + + N ++ + ++ LCK ++ +A +L
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVAN----SSAYNIVVVALCKAARVDDALELARTMSEK 174
Query: 390 SIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
IP + + ++++ G+ +S + EA +++ E EP + T N+L++GFC G +
Sbjct: 175 RIPLAAGSLDSVLVGLMDSGRIDEALQVYR---ENRREPCLVTLNVLLEGFCSRGQVDKA 231
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+L M D+ C P++ S+ +++GL ++G
Sbjct: 232 RELLRAMPDEECAPDEVSYCTVLDGLCKAG 261
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 58/333 (17%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF---------SHNYD--TYHSIIHK 87
P R ++ + +Q +D A Q GK F H D TY ++I
Sbjct: 461 PNRRSHNTIILGLCQQSKIDQACQ----RGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 516
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNV 145
L D LL ++ + +C + T+I AGR + A + +
Sbjct: 517 LCSIARVDDARHLLEDMVKR---QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
V + NTL++ + + + + + + + PNV T L+ LCK + + A
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEAC 632
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL---- 261
V +M S G PNL T+T ++ G+ G ++ ++FG+++ G PD Y L
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 692
Query: 262 ---------------------------------MDGYIKLGRLTDAVKVMDEMEDNGVEP 288
+DG ++ G++ A+ + +M G P
Sbjct: 693 CKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 752
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++ CK + GEAR +L++++ Y
Sbjct: 753 APERCASLVAGLCKSGQGGEARAVLEEIMDLAY 785
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 14/188 (7%)
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAEL 410
+ ++ P + +++I C G+ +EA K+F E P YN LI + + E
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
++ MV++G P+ FT+ ++ G CK G E +++EM + P + S L
Sbjct: 61 EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120
Query: 471 IEGLYESGN--------------EGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGA 516
L G+ +V +A + D+ T + A
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAA 180
Query: 517 GALDELLV 524
G+LD +LV
Sbjct: 181 GSLDSVLV 188
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 192/379 (50%), Gaps = 9/379 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
++++ ++GL + AV+ R+ + V + R+ N +L L +N++ LV +F
Sbjct: 140 LLSLLADHGLL---DDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFD--- 193
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
VPNVFT NI+I LCK+ ++ A + M +MG P++VT+ +++ GY GD+
Sbjct: 194 --LLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDL 251
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E +++ ++ G D TY L++ + K GR+ A EM+ GV N VT+
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++AFCK EA L M R +P+ ++D C+ G+++DA L ++ +
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGR 415
+P+ + ++ LCKEGK+ EA + ERG + + L Y TLI G + A
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L + M KG+E +V Y LI G CK E +L +M G PN ++ +++ L+
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491
Query: 476 ESGNEGEVGKVVSMATASG 494
++G E E ++ SG
Sbjct: 492 KAGKESEAVALLHKILDSG 510
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 205/419 (48%), Gaps = 9/419 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I + + VE L++E++++ C ++ + +I + GR E A F
Sbjct: 237 TYNSLIDGYGKCGDLEEVEQLVSEMRKS---GCAADVVTYNALINCFSKFGRMEKAYSYF 293
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ V +V + +T ++A + +F R + ++PN FT L+ CK
Sbjct: 294 GEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVR-GMMPNEFTYTSLVDGTCK 352
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDAT 256
++ AI +LDEM G+VPN+VT+T ++ G G + A V +++RG V +
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVL-SLMERGGVKANEL 411
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
YT L+ G+ A+ ++++M++ G+E + YG +I CK +K EA++LL M
Sbjct: 412 LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P++ + ++D L + GK +A L ++L P+ +I LCK G I
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA F++ E G P++ Y LI G C+ L +A L ++M++KG+ + Y L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
I G+ K N ++ + +M++ G + ++ I G E V+S +G
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 177/412 (42%), Gaps = 38/412 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I+ ++ + S E+K+ + F T + + G + A+K F +
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQG-VVANVVTFSTFVDAFCKEGLVQEAMKLFAQ 330
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + +L++ + R D ++ H+ +VPNV T +++ LCK+
Sbjct: 331 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLVPNVVTYTVMVDGLCKEG 389
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V A VL M G+ N + +TT++ G+ + E A + + ++G D + Y
Sbjct: 390 KVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYG 449
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G K ++ +A ++ +M G+ PN V Y +++A K K EA LL +L
Sbjct: 450 TLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDS 509
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P+ C +ID LC+ G + +A + ++ P+ + +I CK G + +A
Sbjct: 510 GFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKA 569
Query: 380 KKLFDEF------------------------------------ERGSIPSLLTYNTLIAG 403
L +E E G L Y I+G
Sbjct: 570 MHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISG 629
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
C + EA + +M+ G+ P+ YN LI+ + K+GN +E + EM
Sbjct: 630 FCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 37/329 (11%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
H N TY ++ L + +++L+ L + +K E L+ T+I + +
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS-LMERGGVKANELLYTTLIHGHFMNNNS 426
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLM--------------- 171
E A+ +++ ++ V TL+ L ++++ D L+H M
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTI 486
Query: 172 ----FKNSRHKFKVV-----------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
FK + V PNV T LI LCK + AI ++M +G+
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+ +T ++ G+ G + A + +++D+G D YT L+DGY+K L DA
Sbjct: 547 DPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFA 606
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ +M ++G++ + Y I FC EAR +L +M+ P + +I
Sbjct: 607 LKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQ 666
Query: 337 EEGKVEDACELWKRL--LRKNCMPDNAIS 363
+ G +E+A L + + +C D+ S
Sbjct: 667 KLGNMEEASSLQNEMESVLSSCTEDDTAS 695
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
L +RL +P+ + +I +LCKEG++ EA+ LF + G P ++TYN+LI G
Sbjct: 187 LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 246
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ +L E +L +M + G +V TYN LI F K G ++ EM +G N
Sbjct: 247 KCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVV 306
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLV 524
+FS ++ + G E K+ + G + ++ F T +V D AG LD+ +V
Sbjct: 307 TFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNE---FTYTSLV-DGTCKAGRLDDAIV 361
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 216/441 (48%), Gaps = 10/441 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENL 116
AL + H K S N +Y+++IH R +L E+ Q P++ +
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSS- 267
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+I + + EL ++ + F + + N +++ ++ MF+
Sbjct: 268 YIDALCKARAMDKAELVLRQMIS-NGFEPDKV--TYNCMIHGYSILGQWKETAGMFREMT 324
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ ++P++FTCN + +LCK + A D M + G P+LVT++ +L GY G +
Sbjct: 325 RR-GLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYV 383
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ +F + G V D + Y +L+D Y K G + +A+ + +M++ GV P+ TYG +
Sbjct: 384 VDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTV 443
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I AF + + +A + + M+ P + + +I C G + A EL ++ +
Sbjct: 444 IAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI 503
Query: 357 -MPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAG 414
P+ ++II+ LCKEG++ EA+ +FD G P ++T+N+LI G ++ +A
Sbjct: 504 PRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAF 563
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ D M+ G+EP+V TY+ L+ G+C+ G +G+ + EML KG P ++ +++ GL
Sbjct: 564 GVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGL 623
Query: 475 YESGNEGEVGKVVSMATASGS 495
+ G K+ SG+
Sbjct: 624 FNDGRTVGAKKMCHEMIESGT 644
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 194/439 (44%), Gaps = 42/439 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RP + F R K ++ V N LL L KR D + + + V P+
Sbjct: 132 AHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTI 191
Query: 187 TCNILIKALCKKDDVEGAIRVLDEM--PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
+ + ++K+LC+ + A+ +L M S G PN+V++ T++ G+ G++ A +F
Sbjct: 192 SYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFH 251
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ +G VPD TY+ +D K + A V+ +M NG EP++VTY MI +
Sbjct: 252 EMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILG 311
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ E + +M +R +P C + LC+ GK ++A E + + K PD S
Sbjct: 312 QWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYS 371
Query: 365 TIIHWLCKEGKIWEAKKLFDEF------------------------------------ER 388
++H EG + + LF+ ER
Sbjct: 372 VLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQER 431
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +P TY T+IA L +A ++ M+ G++P+ YN LIQGFC GN +
Sbjct: 432 GVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKA 491
Query: 449 IRILEEMLDKGC-FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLLT 506
++ EM+ +G PN F+ +I L + G E + + G + ++N L+
Sbjct: 492 KELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLID 551
Query: 507 --RIVSDLDSGAGALDELL 523
+V ++ G LD ++
Sbjct: 552 GYGLVGKMEKAFGVLDAMI 570
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 195/431 (45%), Gaps = 7/431 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++H A + +L ++ N I +++ +I YG G + A+ F +
Sbjct: 369 TYSVLLHGYAAEGYVVDMLNLFNSMEGNG-IVADHSVYNILIDAYGKRGMMDEAMLIFTQ 427
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK-NSRHKFKVVPNVFTCNILIKALCKK 198
+++ V + T++ A + R L M K N + P+ N LI+ C
Sbjct: 428 MQERGVMPDAWTYGTVIAAFSRMGR--LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMH 485
Query: 199 DDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A ++ EM S G+ PN V +I+ G + A+ +F ++ G PD T
Sbjct: 486 GNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVIT 545
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+DGY +G++ A V+D M G+EP+ VTY +++ +C+ + + L +ML
Sbjct: 546 FNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREML 605
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P++ ++ L +G+ A ++ ++ D + I+ LC+
Sbjct: 606 SKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDD 665
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA LF + ++ ++ NT+I M + + EA L+D + G+ PN TY ++I
Sbjct: 666 EAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMI 725
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-S 495
K G+ +E + M GC P+ + +I L E G + G +S S
Sbjct: 726 TNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTIS 785
Query: 496 VESDSWNFLLT 506
+E+ + + +L+
Sbjct: 786 LEASTASLMLS 796
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 9/369 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKN 174
TVI + GR A+ F ++ ++ N+L+ + K +L+ M
Sbjct: 442 TVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSR 501
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ PN N +I +LCK+ V A + D + +G P+++T +++ GY G
Sbjct: 502 GIPR----PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVG 557
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A V ++ G PD TY+ L+DGY + GR+ D + + EM GV+P +TYG
Sbjct: 558 KMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYG 617
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ ++ A+ + +M++ + C ++ LC ++A L+K+L
Sbjct: 618 IILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAM 677
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
N + AI +T+I + K K EA +LFD G +P+ TY +I + + + EA
Sbjct: 678 NVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEA 737
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
++ M + G P+ N +I+ + G + L ++ K ++ SL++
Sbjct: 738 DNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSL 797
Query: 474 LYESGNEGE 482
G E
Sbjct: 798 FSRKGKYRE 806
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 10/288 (3%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM-DEMEDNGVEPNEVTYGVMIEAF 300
+FG L G D +L+ R DAV V+ M + GVEP+ ++Y ++++
Sbjct: 141 LFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSL 200
Query: 301 CKGKKSGEARNLLDDMLQRK--YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C+ +S A +LL M+++ P+ VI EG+V AC L+ ++++ +P
Sbjct: 201 CEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVP 260
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D S+ I LCK + +A+ + + G P +TYN +I G + E ++
Sbjct: 261 DVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMF 320
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+M +G+ P++FT N + CK G +KE + M KG P+ ++S+L+ G
Sbjct: 321 REMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAE 380
Query: 478 GNEGEVGKVVSMATASGSVESDS-WNFLLTRIVSDLDSGAGALDELLV 524
G ++ + + +G V S +N L+ D G +DE ++
Sbjct: 381 GYVVDMLNLFNSMEGNGIVADHSVYNILI-----DAYGKRGMMDEAML 423
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 123/250 (49%), Gaps = 4/250 (1%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R +P TY +LMD + R T + G++ + + ++++ C K+S +
Sbjct: 113 RVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDD 172
Query: 309 ARN-LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAISST 365
A N LL M + P + V+ LCE+ + + A +L +++K+ C P+ +T
Sbjct: 173 AVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNT 232
Query: 366 IIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+IH +EG++ +A LF E ++G +P ++TY++ I +C++ + +A + M+ G
Sbjct: 233 VIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
EP+ TYN +I G+ +G KE + EM +G P+ + + + L + G E
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352
Query: 485 KVVSMATASG 494
+ A G
Sbjct: 353 EFFDSMAAKG 362
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 137/316 (43%), Gaps = 15/316 (4%)
Query: 81 YHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
++SII+ L + R +A + L+ + + P++ F ++I YGL G+ E A
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVIT----FNSLIDGYGLVGKMEKAFGVL 566
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ V + + LL+ +N R D ++F+ K V P T I++ L
Sbjct: 567 DAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK-GVKPTTITYGIILHGLFN 625
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
GA ++ EM G ++ T ILGG + A +F + +
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAI 685
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
++D K+ + +A ++ D + G+ PN TYGVMI K EA N+ M
Sbjct: 686 INTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLME 745
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ PSS L +I +L E+G++ A ++ K + + +S ++ ++GK
Sbjct: 746 KSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYR 805
Query: 378 EAKK-------LFDEF 386
E K FDEF
Sbjct: 806 EQIKSLPAMYQFFDEF 821
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 56/200 (28%)
Query: 342 EDACELWKRLLRKNC-MPDNAISSTII-------HWLCKEGKIWEAKKLFDEF------E 387
ED L+ LLR+ +P+ A++ + C++G A LF+
Sbjct: 54 EDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSL-AVALFNRICREEARP 112
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLW----------------------------DD 419
R ++P++ TYN L+ C + T L+ DD
Sbjct: 113 RVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDD 172
Query: 420 MV--------EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK--GCFPNKTSFSL 469
V E GVEP+ +Y+ +++ C+ ++ + +L M+ K GC PN S++
Sbjct: 173 AVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNT 232
Query: 470 LIEGLYESGNEGEVGKVVSM 489
+I G + EGEV K ++
Sbjct: 233 VIHGFFR---EGEVSKACNL 249
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 217/486 (44%), Gaps = 56/486 (11%)
Query: 76 HNYDTYHSIIHKLARARAFDAV--ESLLTELKQNPEIKCGENLF---------------I 118
+++ Y R A D V +L+ EL Q +I +++
Sbjct: 71 RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 130
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I AGR AV+ F +E + + + L++ L + ++ D M +
Sbjct: 131 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--- 235
F P+ T N+LI LCK DVE A DEM G P++ T+ ++ G+ G+
Sbjct: 191 F-CTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 249
Query: 236 ---------------------------------IENAKRVFGDILDRGWVPDATTYTVLM 262
IE A + I G P TY L+
Sbjct: 250 ASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALL 309
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+G K+GRL +A+ ++ ++ DNG P+ VTY +I+ K K+S EA L +M R
Sbjct: 310 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLA 369
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+ +I L + GK+ A ++K + C+PD ST+I L K G+I A ++
Sbjct: 370 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 429
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F E RG P+ + Y+ LI G+C++ ++ A + M + P+ TYN+LI G CK
Sbjct: 430 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 489
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESDS 500
G+ + +EML+ GC P+ ++++LI G ++GN + G M+++ S +
Sbjct: 490 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVT 549
Query: 501 WNFLLT 506
+ L++
Sbjct: 550 YGALIS 555
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 163/350 (46%), Gaps = 11/350 (3%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVF 186
E AV +I ++ + N LLN L + R DL+ + N P+V
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-----CTPDVV 57
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T LI L K+ A ++ EM G+ + V +T ++ + G I A V+ +
Sbjct: 58 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G VPD T + ++DG K GR+ AV++ ME G+ PNEV Y +I CK +K
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A +L M + P + +ID LC+ G VE A + +L C PD + +
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237
Query: 367 IHWLCKEGKIWEAKKLFDEFE--RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
I CK G A + G + TY ++ + ++ ++ EA L + + G
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
P + TYN L+ G CK+G +E I +L +++D GC P+ +++ LI+GL
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 195/426 (45%), Gaps = 12/426 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + + + +D AL++ K + + TY+ +I L ++ +A
Sbjct: 159 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAF--CTPDTITYNVLIDGLCKSGDVEAAR 216
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFN-VQRSVRSLNTL 155
+ E+ E C +++ +I + AG + A + + N + + +
Sbjct: 217 AFFDEM---LEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAI 273
Query: 156 LNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
++ L +NK+ + V LM K + + P + T N L+ LCK +E AI +L ++
Sbjct: 274 VDWLAKNKKIEEAVALMEKITANG--CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P++VT+T+++ G A ++F ++ RG D YT L+ ++ G++ A
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V M +G P+ VT MI+ K + G A + M R P+ + +I
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 451
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPS 393
LC+ K++ A E+ ++ + C PD + +I LCK G + A+ FDE E G P
Sbjct: 452 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+ TYN LI+G C++ A ++DDM NV TY LI G CK + +
Sbjct: 512 VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQ 571
Query: 454 EMLDKG 459
M ++G
Sbjct: 572 HMKERG 577
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 159/308 (51%), Gaps = 3/308 (0%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A+ +++++ + G P + T+ +L G G +E A + I+D G PD TYT
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+DG K R +A K+ EM G+ + V Y +I + K +A ++ M
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP +ID L + G++ A ++K + + P+ + S +IH LCK K+ A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 381 KLFDEFERG-SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
++ + ++ P +TYN LI G+C+S ++ A +D+M+E G +P+V+TYN+LI GF
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 440 CKIGNAKEGIRIL-EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK GN L +E GC + +++ +++ L ++ E ++ TA+G +
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301
Query: 499 -DSWNFLL 505
++N LL
Sbjct: 302 IATYNALL 309
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 10/420 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++++ L + + LL ++ N P++ + ++I G R A K
Sbjct: 23 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV----TYTSLIDGLGKEKRSFEAYKL 78
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + L+ L+Q + ++K + VP+V T + +I L
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYK-TMTSHGCVPDVVTLSTMIDGLS 137
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+R+ M + G+ PN V ++ ++ G ++ A + + PD
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK-GKKSGEARNLLDD 315
TY VL+DG K G + A DEM + G +P+ TY ++I FCK G + +L +
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
++D L + K+E+A L +++ C P A + +++ LCK G+
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EA L + + G P ++TY +LI G+ + EA +L+ +M +G+ + Y
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTA 377
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI+ + G + + + M GC P+ + S +I+GL ++G G ++ A G
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 437
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC---------------------------- 301
++ +AV +M+++ NG P TY ++ C
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 302 -------KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
K K+S EA L +M R + +I L + GK+ A ++K +
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
C+PD ST+I L K G+I A ++F E RG P+ + Y+ LI G+C++ ++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ M + P+ TYN+LI G CK G+ + +EML+ GC P+ ++++LI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 474 LYESGN 479
++GN
Sbjct: 241 FCKAGN 246
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 207/398 (52%), Gaps = 13/398 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ +I+ L++ + L+ E+ + ++ + +I Y G A+ +
Sbjct: 274 TFNVLINGLSKKGELQQAKGLIQEMAK-AGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332
Query: 140 IEKFNVQRSVRSLNTLLNAL-----VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ V +V S NT++ + + R L ++ KN ++P++ + N LI
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN------LMPDIISYNTLIYG 386
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
C+ ++ A +LDE+ + N+VT+ T++ G GD+E A ++ D+++RG PD
Sbjct: 387 FCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPD 446
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TYTVL++G KLG + A + DEM G+ P++ Y I K + +A L +
Sbjct: 447 VVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQE 506
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ML + + P ++ LC+ G +E+A EL ++++R +PD+ ++ +H + G
Sbjct: 507 EMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566
Query: 375 KIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ E +++F D RG P+++TY LI + L A + +M EKGV PNV TYN
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYN 626
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+LI GFCK+ + + EM +KG FPNK ++++LI
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILI 664
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 173/323 (53%), Gaps = 3/323 (0%)
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
Y + + K R++F +P+V CN ++K L K+ + A+ V M G+ P + T+
Sbjct: 184 YQCLLVFEKMMRNRF--LPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYN 241
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T+L + G+++ A + + +RG P T+ VL++G K G L A ++ EM
Sbjct: 242 TMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKA 301
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ + TY +I +CK EA L ++M+ R P+ A ++ C+EGK+ DA
Sbjct: 302 GLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDA 361
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAG 403
+ +L+KN MPD +T+I+ C+ G I EA L DE R +++TYNTLI G
Sbjct: 362 RQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDG 421
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C +L A +L +DM+ +G+ P+V TY +L+ G CK+GN +EML G P+
Sbjct: 422 LCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPD 481
Query: 464 KTSFSLLIEGLYESGNEGEVGKV 486
+ +++ I G + G+ + K+
Sbjct: 482 QFAYTARIVGELKLGDTAKAFKL 504
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 2/357 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T++ + G+ A + + K N+ + S NTL+ + ++ R +
Sbjct: 347 TIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFR 406
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ N+ T N LI LC+ D+E A+++ ++M + G+ P++VT+T ++ G G++
Sbjct: 407 -NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK F ++L G PD YT + G +KLG A K+ +EM G P+ +TY V +
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
CK EA LL M++ +VP + E G + + E++ +L + P
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585
Query: 359 DNAISSTIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +IH G++ W + E+G +P+++TYN LI G C+ ++ +A + +
Sbjct: 586 TVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFF 645
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+M EKG+ PN +TY +LI C +G +E +R+ +ML K P+ + L++ L
Sbjct: 646 IEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL 702
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 198/381 (51%), Gaps = 16/381 (4%)
Query: 108 PEIK-CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----N 162
P++K C N + ++R+ L + A++ + + ++ ++ +V + NT+L++ +
Sbjct: 200 PDVKNC--NRILKILRDKNLLVK---ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQ 254
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ DLV M + + P+ T N+LI L KK +++ A ++ EM G+ + T
Sbjct: 255 RALDLVPKMQERGCY-----PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYT 309
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ GY +G + A ++ +++ RG P ++ +M G+ K G+++DA + + +M
Sbjct: 310 YNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDML 369
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+ P+ ++Y +I FC+ GEA LLD++ R + +ID LC G +E
Sbjct: 370 KKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLI 401
A +L + ++ + PD + +++ CK G + AK+ FDE G P Y I
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARI 489
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + + +A +L ++M+ KG P+V TYN+ + G CK+GN +E +L++M+ G
Sbjct: 490 VGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHV 549
Query: 462 PNKTSFSLLIEGLYESGNEGE 482
P+ +++ + E+G+ E
Sbjct: 550 PDHVTYTSFMHAHMENGHLRE 570
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 105/194 (54%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N+ + LCK ++E A +L +M G VP+ VT+T+ + ++ G + + +
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREI 574
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F D+L RG P TYTVL+ + GRL A+ EM++ GV PN +TY V+I FCK
Sbjct: 575 FYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K +A +M ++ P+ +I+ C GK ++A L+ ++L K PD+
Sbjct: 635 VRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCT 694
Query: 363 SSTIIHWLCKEGKI 376
++ L K+ K+
Sbjct: 695 HGALLKKLDKDYKV 708
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 194/385 (50%), Gaps = 3/385 (0%)
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
R G G + A+ +F R+ N Q + N LL+++V+ K+Y+ V +FK + +
Sbjct: 13 RRKGYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFR-GI 71
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
NV T +ILI C V+ V + G P++V TT++ G G E A
Sbjct: 72 KYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAG 131
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ G VPD T LM GY G++ K+ M G++P+ +Y + I +C
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K +K EA L D+M R VP++ +I LC+ + DA L++++ PD
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
ST++ CK+G + E LF E +R + P L+ Y +I GMC S ++ +A + +
Sbjct: 252 AYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ +G++P+V TY L+ G C+ G+ E +R+ +M + GC P S+++L++G + +
Sbjct: 312 IVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDT 371
Query: 481 GEVGKVV-SMATASGSVESDSWNFL 504
V +++ MA ++ + FL
Sbjct: 372 STVVQLIHEMADRGFYADAVTRTFL 396
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 196/380 (51%), Gaps = 10/380 (2%)
Query: 95 DAVESLLTELKQNPEIKCGE--NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
DA+ S L +NP+ E L +V+R + E V F +E ++ +V +L
Sbjct: 23 DALASFNRMLDRNPQPPIIEFNRLLSSVVR----MKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 153 NTLLNALVQNKRYDLVHLMF-KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ L+N D +F K + FK P+V LI +C+ E A +L EM
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFK--PDVVIFTTLIDGVCRIGKTELAAGLLKEM 136
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G VP++VT +++ GY +G I+ +++F ++ +G PD +Y++ ++GY K+ ++
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A+++ DEM GV PN VTY +I+A C+ + +A+ L M P +
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTL 256
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
+D C++G +++ L++ + R+ PD + + II+ +C+ K+ +AK++ G
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL 316
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P + TY L+ G+C + EA RL+ M E G P +YN+L+QG + + ++
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQ 376
Query: 451 ILEEMLDKGCFPNKTSFSLL 470
++ EM D+G + + + + L
Sbjct: 377 LIHEMADRGFYADAVTRTFL 396
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 132/294 (44%), Gaps = 40/294 (13%)
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+ G++++A F +LDR P + L+ +++ + V + EME G++ N
Sbjct: 17 YFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVC 76
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T ++I FC L V+ ++ +
Sbjct: 77 TLSILINCFC--------------FLHH---------------------VDYGFSVFGKT 101
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAEL 410
L++ PD I +T+I +C+ GK A L E G +P ++T N+L+ G C ++
Sbjct: 102 LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKI 161
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ +++ MV KG++P+V++Y++ I G+CK+ E + + +EM +G PN +++ L
Sbjct: 162 DKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTL 221
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLV 524
I+ L ++ + + A G S + L + D G LDE+LV
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGL----SPDILAYSTLLDGFCKQGNLDEMLV 271
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 92/245 (37%), Gaps = 39/245 (15%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q +D +IFH + +Y I+ + D L E+ +
Sbjct: 158 QGKIDKVRKIFHLM--VSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVP-N 214
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T+I+ A RP A F ++ + + + +TLL+ + D + ++F+
Sbjct: 215 AVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQ 274
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ + V P++ I+I +C+ V+ A VL + G+ P++ T+T ++ G
Sbjct: 275 EMQRRL-VKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCRE 333
Query: 234 GDIENAKRVF-----------------------------------GDILDRGWVPDATTY 258
G I A R+F ++ DRG+ DA T
Sbjct: 334 GSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTR 393
Query: 259 TVLMD 263
T L D
Sbjct: 394 TFLKD 398
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 168/296 (56%), Gaps = 2/296 (0%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FT N L+ ALCK + E AI + +M P L T+T+++ G++ G ++ A +
Sbjct: 255 FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKE 314
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++RG++PDA TYT ++DG KLGR+ + + EM + G EP+ VTY +I+ F K K
Sbjct: 315 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 374
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+A + MLQ V S+ ++D LC+ G+V +A + + + C+ S
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434
Query: 366 IIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ C EG + A +LF +RG P+L++YN +I G+C + +L +A ++ ++++
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494
Query: 425 VEPNVFTYNMLIQGFC-KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ P+V+T+N + G C ++ +G+ + E M+ +G PN S+S+L++G+ +G
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 550
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 211/429 (49%), Gaps = 9/429 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT---VIRNYGLAGRPELAVKT 136
Y ++I LA+ D L ++ +N + E + VIR +G E A+
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ ++ + + N L+ AL + +R + + F + + P +FT L+
Sbjct: 243 FDELDD-SLDLTHFTFNPLVAALCKAERTEEA-IAFVKKMSERRCFPTLFTYTSLVDGFL 300
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A+ L E G +P+ VT+T+I+ G G +E F ++ +RG+ PDA
Sbjct: 301 KLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 360
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+DG++K + A +V +M +G + VTY ++++ CK + EA M
Sbjct: 361 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 420
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+R V + ++D C EG V A EL++R+L + C P+ + II LC+ GK+
Sbjct: 421 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 480
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG-RLWDDMVEKGVEPNVFTYNM 434
+A F++ +R P + T+N+ + G+C+ + G L++ MV +G PN+ +Y++
Sbjct: 481 AKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSI 540
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ G C+ G + + I EM+ +G P+ F+ LI L +G E +V
Sbjct: 541 LMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS 600
Query: 495 SVESDSWNF 503
+ D+W++
Sbjct: 601 A--PDAWSY 607
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 167/337 (49%), Gaps = 8/337 (2%)
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
R LLN L + + D L+ + P++ ++I LC++ ++ A VL+
Sbjct: 10 RVCTALLNGLCKTGQLDRAMLLLD----EMPCSPDMVAFTVVINGLCREKRLDEAFSVLE 65
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
G P+ VT+ + G +++A ++ + ++ +P TYT L+DG +K G
Sbjct: 66 RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAG 125
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
RL +A+ ++++M + G P TY V+I+ K + EAR + DML P + +
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+I L + GK+++A +++ C PD I + +I LC G + +A FDE
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ + T+N L+A +C++ EA M E+ P +FTY L+ GF K+G
Sbjct: 246 LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRL 305
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
E + L+E +++G P+ +++ +I+GL + G E
Sbjct: 306 DEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEE 342
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 128/239 (53%), Gaps = 9/239 (3%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++DR V D T L++G K G+L A+ ++DEM P+ V + V+I C+ K+
Sbjct: 1 MIDRKLV-DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKR 56
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA ++L+ ++ P ID LC+ +V+DA +L K++ K C+P +
Sbjct: 57 LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ L K G++ EA + ++ E+G+ P+L TY +I G+ ++ + EA R++ DM+ G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF----PNKTSFSLLIEGLYESGN 479
P+ F Y LI G KIG E + L +M++ GC P+ +L+I L SGN
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGN 235
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 184/422 (43%), Gaps = 51/422 (12%)
Query: 49 SMIFRQ----QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+++ RQ NL+ AL F + + + T++ ++ L +A + E + +
Sbjct: 224 NLVIRQLCASGNLEDALAYFD---ELDDSLDLTHFTFNPLVAALCKA---ERTEEAIAFV 277
Query: 105 KQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQ 161
K+ E +C LF +++ + GR + A+ +E+ + +V + ++++ L +
Sbjct: 278 KKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV-TYTSIIDGLCK 336
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
R + F R++ P+ T LI K + A RV +M G V + V
Sbjct: 337 LGRVEEGCERFHEMRNR-GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 395
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ IL G G + A F + +RG V TY+ LMDG+ G ++ AV++ M
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS--------SALCCKV-- 331
D G EPN V+Y ++I C+ K +A + +LQR+ P LC ++
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDT 515
Query: 332 --------------------------IDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+D +C G +E E++ ++ + PD + +T
Sbjct: 516 VGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNT 575
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+I WLC G++ EA ++F E ER S P +Y +L+ + + EA L M +G
Sbjct: 576 LIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGC 635
Query: 426 EP 427
P
Sbjct: 636 AP 637
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ CK + A LLD+M P VI+ LC E ++++A + +R +R
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C PD + I LCK ++ +A +L + E+ +P+ +TY L+ G+ ++ L EA
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ + MVEKG P + TY ++I G K G +E RI +ML GC P+ ++ LI GL
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Query: 475 YESGNEGE----VGKVVSMATASGSVESDS--WNFLLTRIVS--DLDSGAGALDEL 522
+ G E + ++V A G VE D N ++ ++ + +L+ DEL
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARG-VEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 210/423 (49%), Gaps = 11/423 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+ H ++ L A AF +L ++ + C F ++R+ G+P A++ +
Sbjct: 87 SLHPLLSSLPSAPAF----ALFADIYRLRLPLC-TTTFNIMLRHLCATGKPVRALELLRQ 141
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + N + NT++ R + + R + + P+ +T LI CK
Sbjct: 142 MPRPNAV----TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197
Query: 200 DVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E A++V DEM + G V P+ V + ++GGY G ++ A + D++ RG TY
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+LM R +DA V++EM+ NG P+ TY ++I +CK +A + ++M Q
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ ++ +I + +G+V++ L+ ++K PD + + +I+ C G +
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377
Query: 379 AKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A ++ E E+ IP +TYNTL+ G C L EA L D+M ++G++P++ +YN LI
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G+ G+ K+ +R+ +EM+DKG P +++ LI+GL + + ++ A G
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497
Query: 498 SDS 500
DS
Sbjct: 498 DDS 500
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 214/435 (49%), Gaps = 25/435 (5%)
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPE-LAVKTFLRIEKFNVQRSVRSLNTLLN 157
S+L L +P + +L +T A RP +++ + +++ +V V SL+ LL+
Sbjct: 41 SVLPHLSASPSLP---HLLLTA----SAAARPHATSLRLYAQLKSLSVPIPVASLHPLLS 93
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+L + L ++ R + + F NI+++ LC A+ +L +MP
Sbjct: 94 SLPSAPAFALFADIY---RLRLPLCTTTF--NIMLRHLCATGKPVRALELLRQMPR---- 144
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVK 276
PN VT+ T++ G+ RG ++ A V ++ +RG + PD TY L+ G+ K+GR+ DAVK
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204
Query: 277 VMDEMEDNG-VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
V DEM G V P+ V Y +I +C K A +DM+QR + A ++ L
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
+ + DA + + + + PD + +I+ CKEG +A ++F+E ++G +
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+TY +LI ++ E RL++ V+KG+ P+V YN LI C G+ + I+ E
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE 384
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLT--RIVS 510
M K P+ +++ L+ G G E ++ T G ++ D S+N L++ +
Sbjct: 385 MEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG-IQPDLVSYNTLISGYSMKG 443
Query: 511 DLDSGAGALDELLVK 525
D+ DE++ K
Sbjct: 444 DIKDALRVRDEMMDK 458
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 163/336 (48%), Gaps = 12/336 (3%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY ++I + R DAV+ + E+ E+ ++ +I Y G+ ++A++
Sbjct: 185 TYATLISGWCKIGRMEDAVK-VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRE 243
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + +V + N L++AL + R Y ++ M KN P+VFT NILI
Sbjct: 244 DMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNG-----FSPDVFTYNILING 298
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK+ + + A+ V +EM G+ VT+T+++ + +G ++ R+F + +G PD
Sbjct: 299 YCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPD 358
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y L++ + G + A ++M EME + P+++TY ++ FC + EAR L+D
Sbjct: 359 VVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID 418
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M +R P +I +G ++DA + ++ K P + +I LCK
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIR 478
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ +A+ L E +G P TY +LI G+ E
Sbjct: 479 QGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 220/470 (46%), Gaps = 25/470 (5%)
Query: 33 PPIKP----WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH---PN-FSHNYDTYHSI 84
PP P WP+ L L ++ +++ AL IF A P+ + + T +
Sbjct: 2 PPANPTPPKWPKTLTADHLHRLVRAERDPRRALAIFDAATAASTSAPDPITPSPATVSLL 61
Query: 85 IHKLARARAFDAVESLLTELKQN-PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK- 142
+LA A SLL+ + P + E F+ ++R + RP A+ F
Sbjct: 62 TSRLASAGHLPLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSD 121
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK--KDD 200
+ S RS N +L ALV + L + + R P T N+L+KA C D
Sbjct: 122 LALPHSARSYNAVLAALVAHSHLPLARSLLADMR-AAGFAPTAATYNVLLKAQCSDAAAD 180
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+R+ +P P++ ++ TI+ G RG + A +F +++ + P TYT
Sbjct: 181 IKDALRLFRNIPK----PDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTT 236
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + G DA+K+ DEM GV PN VTY +I+ CKG ++ A L+D M++ K
Sbjct: 237 LIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEK 296
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P++ VID LC+E + +A E+ R+ + PD + +I LC G+ EA
Sbjct: 297 KLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAA 356
Query: 381 KLFDEFERGSI-PSLLTY-------NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
DE I P+ +T+ NT++ +C EL A +++ + + + T+
Sbjct: 357 NYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTDPTTF 416
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
++L++ F K N ++ ++ +ML + C P + ++ ++I G + G
Sbjct: 417 HLLVESFSKKKNMEKAAHVVLDMLSERCIPERETWDVIISGYWSKKKGGS 466
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 11/260 (4%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
A +Y ++ + L A ++ +M G P TY V+++A C S A ++
Sbjct: 127 SARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAQC----SDAAADIK 182
Query: 314 DDMLQRKYVPSSALCC--KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
D + + +P +C +ID LC G++ A E++ ++ K P +T+IHWL
Sbjct: 183 DALRLFRNIPKPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLA 242
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+EG +A K+FDE RG P+L+TY++LI G+C+ A L D M+++ PN
Sbjct: 243 REGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTI 302
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY+ +I G CK E + +L+ M +G P+ F LI GL ++G E +
Sbjct: 303 TYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEM 362
Query: 491 TASGSVESD--SWNFLLTRI 508
+G +E + +W+ L TRI
Sbjct: 363 ILAG-IEPNRVTWS-LHTRI 380
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 219/470 (46%), Gaps = 42/470 (8%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ F++ + A ++H F + T++SII+ L +ARA D E
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEM--MQQGFVPDVVTHNSIINALCKARAVDNAE 171
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
LL ++ N + + + ++I Y GR E A K F + + R L
Sbjct: 172 LLLRQMVDNG-VPPNKVTYTSMIHGYSTLGRWEEATKMFREM-------TGRGL------ 217
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+P++ + N + +LCK + A + M + G P
Sbjct: 218 -----------------------IPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRP 254
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N+VT+ +L GY G + F + G V + +T+L+D Y K G + +A+ ++
Sbjct: 255 NIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLIL 314
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM+ G+ P+ TY +I A C+ + +A + + M+ P++ + +I C
Sbjct: 315 SEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTH 374
Query: 339 GKVEDACELWKRLLRKNC-MPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
G + A EL ++ P+ A ++I+H +CKEG++ +A +FD + G ++
Sbjct: 375 GDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIM 434
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+NTLI G C E+ +A + D M+ G+ P+ FTYN L+ G+ K G +G+ + EM
Sbjct: 435 FNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMS 494
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLL 505
DK P +++++++GL+ +G K++ G+ S ++N +L
Sbjct: 495 DKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 176/391 (45%), Gaps = 39/391 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RPEL + F R+ + ++ + NT+L L KR D + + VP+ F
Sbjct: 21 ARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAF 80
Query: 187 TCNILIKALCKKDDVEGAIRVL-------------------------------------D 209
+ I++K LC + + A+ +L
Sbjct: 81 SYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYH 140
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
EM G VP++VTH +I+ ++NA+ + ++D G P+ TYT ++ GY LG
Sbjct: 141 EMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLG 200
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +A K+ EM G+ P+ V++ +++ CK +S EA + M + + P+
Sbjct: 201 RWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYG 260
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-R 388
++ EG D + + + + + + +I K G + EA + E + +
Sbjct: 261 ILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQ 320
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P + TY+TLI+ +C L +A ++ M+ GV+PN Y+ LIQGFC G+ +
Sbjct: 321 GLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKA 380
Query: 449 IRILEEMLDKGC-FPNKTSFSLLIEGLYESG 478
++ EM++ G PN F+ ++ + + G
Sbjct: 381 KELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 154/314 (49%), Gaps = 2/314 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+VFT + LI ALC+ + A+ ++M G+ PN V + +++ G+ GD+ AK +
Sbjct: 324 PDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKEL 383
Query: 243 FGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++++ G P+ + ++ K GR+ DA + D ++D G + + + +I+ +C
Sbjct: 384 VYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYC 443
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ G+A ++LD M+ P + +++ + G+++D L++ + K P
Sbjct: 444 LVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTV 503
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ I+ L + G+ A+K+ E G+ SL TYN ++ G+C + EA ++ +
Sbjct: 504 TYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKL 563
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V+ N+ T N +I + +E + + D G PN +++ ++I L + G+
Sbjct: 564 CTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSV 623
Query: 481 GEVGKVVSMATASG 494
E + S SG
Sbjct: 624 EEADNMFSSMEKSG 637
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 161/352 (45%), Gaps = 16/352 (4%)
Query: 84 IIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+I A+ D +L+E++ +P++ L + R GR AV F ++
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCR----MGRLADAVDKFNQM 352
Query: 141 EKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
VQ + ++L+ + K +LV+ M N + PN+ N ++ ++C
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPR----PNIAFFNSIVHSIC 408
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ V A + D + +G +++ T++ GY G++ A V ++ G PD
Sbjct: 409 KEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTF 468
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L++GY K GR+ D + + EM D ++P VTY ++++ + ++ A+ +L +M
Sbjct: 469 TYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEM 528
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ S ++ LC ++A ++++L N + +T+I+ + +
Sbjct: 529 IGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRR 588
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
EAK LF + G +P+ TY +I + + + EA ++ M + G P
Sbjct: 589 EEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 8/271 (2%)
Query: 77 NYDTYHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N ++SI+H + + R DA + L+ ++ + +I +F T+I Y L G A
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDII----MFNTLIDGYCLVGEMGKA 451
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + NTL+N ++ R D +F+ K K+ P T NI++
Sbjct: 452 FSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK-KIKPTTVTYNIILD 510
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
L + A ++L EM G +L T+ IL G + A +F +
Sbjct: 511 GLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKF 570
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TT +++ + R +A + + D+G+ PN TYG+MI K EA N+
Sbjct: 571 NITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMF 630
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
M + P S L I L E+G++ A
Sbjct: 631 SSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 183/357 (51%), Gaps = 2/357 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T++ Y +GR E A +++ ++ + +L++ + + R + +F+ K
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P+ N LI C K +++ A DEM G+ P + T+ +++ +
Sbjct: 321 -GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDE 379
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ + +I ++G PDA TY +L++GY + A + DEM +G++P + TY ++
Sbjct: 380 AECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K + EA +L + +P + +ID C V+ A EL K + R P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D +TI+ C+EGK+ EA++LFDE +R I P +++NTLI+G ++ +A R+
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++M++ G P V TYN L+QG CK +L+EM+ KG P+ T++ LIEG+
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 204/376 (54%), Gaps = 4/376 (1%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E V+ ++ + NT+++ + R + + + + K+ P+ FT LI +CK+
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMCKQG 305
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A ++ +EM G+ P+ V + T++ G+ +G+++ A ++L +G P +TY
Sbjct: 306 RLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYN 365
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ R +A ++ E+++ G+ P+ +TY ++I +C+ + +A L D+ML
Sbjct: 366 SLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLAS 425
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ +L ++ ++++A +L+K++ + +PD + + +I C + A
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGA 485
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L + +R +P +T+NT++ G C ++ EA L+D+M +G++P+ ++N LI G
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG-KVVSMATASGSVE 497
+ + G+ K+ R+ EMLD G P +++ L++GL ++ EG++ +++ + G
Sbjct: 546 YSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN-QEGDLAEELLKEMVSKGMTP 604
Query: 498 SDSWNFLLTRIVSDLD 513
D+ F L ++ ++
Sbjct: 605 DDTTYFTLIEGIAKVN 620
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 3/367 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++I+H + +A +++LT +K+ +I+ + ++I GR E A K
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKI 313
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + ++ S NTL++ D+ +K+ K + P + T N LI AL
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS-AYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A ++ E+ G+ P+ +T+ ++ GY + + A + ++L G P
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+ K R+ +A + ++ GV P+ + + +I+ C A LL DM
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ K P ++ C EGKVE+A EL+ + R+ PD+ +T+I + G I
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A ++ +E + G P++LTYN L+ G+C++ E A L +MV KG+ P+ TY L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 436 IQGFCKI 442
I+G K+
Sbjct: 613 IEGIAKV 619
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 155/307 (50%), Gaps = 1/307 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+ LIK+ C + + A M G++P + T ++L ++ E A ++ ++
Sbjct: 155 DYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFR 214
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
T+ ++++ K G+L A + ME +GV+PN VTY ++ +C +
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEA 274
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L M ++K P S +I +C++G++E+A ++++ +++K P I +T+I
Sbjct: 275 ADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID 334
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C +G + A DE ++G P++ TYN+LI + EA + ++ EKG+ P
Sbjct: 335 GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ TYN+LI G+C+ NAK+ + +EML G P K +++ L+ L + E +
Sbjct: 395 DAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLF 454
Query: 488 SMATASG 494
T+ G
Sbjct: 455 KKITSEG 461
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+P + TCN L+ K + E A + EM + + ++ T ++ G ++ AK
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
G + G P+ TY ++ GY GR+ A ++ M+ +EP+ TYG +I
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGM 301
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + EA + ++M+Q+ PS+ + +ID C +G ++ A +L+K P
Sbjct: 302 CKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTM 361
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +++IH L E + EA+ + E E+G P +TYN LI G C A +A L D+
Sbjct: 362 STYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDE 421
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ G++P TY L+ K KE + +++ +G P+ F+ LI+G + N
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSN 481
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 11/307 (3%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL---DRGWVPDATTYTV 260
AI ++ +PS P L LGG G + + +F + DR + +
Sbjct: 103 AIVIVARLPSPK--PALHLLKQALGG----GTTNSIREIFEFLAASRDRLGFKSSIVFDY 156
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + R +A + M++ GV P T ++ F K ++ A L +M + +
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
S +I++LC+EGK++ A + + P+ +TI+H C G++ A
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ +R I P TY +LI+GMC+ L EA +++++MV+KG+ P+ YN LI GF
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVES 498
C GN +EML KG P ++++ LI L+ E ++ G S ++
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396
Query: 499 DSWNFLL 505
++N L+
Sbjct: 397 ITYNILI 403
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 35/271 (12%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPE---------------------- 109
S TY+S+IH L + D E ++ E+++ +P+
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417
Query: 110 ---------IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
IK + + +++ R + A F +I V V N L++
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
N + K+ + KV P+ T N +++ C++ VE A + DEM G+ P+
Sbjct: 478 SNSNVKGAFELLKD-MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
++ T++ GY RGDI++A RV ++LD G+ P TY L+ G K A +++ E
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
M G+ P++ TY +IE K E +N
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 187/381 (49%), Gaps = 37/381 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + + +V N L L + K+YDLV + K K + +++T NI+I
Sbjct: 74 AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELK-GIAYDLYTLNIMI 132
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A + ++ +G PN VT T+L G G + A + ++ V
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD T +++G R+++AV ++ M NG +PN+ TYG ++ CK + A +L
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA---------------------------- 344
L M RK P +ID LC++G+++DA
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312
Query: 345 -------CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
+L + ++ + P+ S +I L KEGK+ EAK L++E RG P+ +T
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN+LI G+C L EA ++ D MV KG +P+++TYN+LI GFCK +G+R+ +M
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS 432
Query: 457 DKGCFPNKTSFSLLIEGLYES 477
+G + ++S LI+G +S
Sbjct: 433 LRGMIADTVTYSTLIQGFCQS 453
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 217/442 (49%), Gaps = 13/442 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK-FHPNFSHNYDTYHSIIHKLA-RARAFDAVE--SLLT 102
+++ R++ L A F GK F + N T++++++ L R F+AVE +
Sbjct: 131 MINCFCRRRKLGFA---FSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187
Query: 103 ELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ P++ T++ L R AV R+ Q + + +LN + ++
Sbjct: 188 LSQHVPDLIT----LNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ + H+ K+ P+V T I+I LCK ++ A+ EM + G+ N+ T
Sbjct: 244 GNTASALDLLRKMEHR-KIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFT 302
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ +++G + G ++ ++ D++ R P+ T++ L+D +K G+LT+A + +EM
Sbjct: 303 YNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMI 362
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G+EPN +TY +I C K+ EA ++D M+ + P +I+ C+ +V+
Sbjct: 363 TRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVD 422
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
D L++++ + + D ST+I C+ K+ AKK+F E +G P ++TY L+
Sbjct: 423 DGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILL 482
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+C++ EL EA + D M + +E ++ YN++I G C + + + KG
Sbjct: 483 DGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVK 542
Query: 462 PNKTSFSLLIEGLYESGNEGEV 483
+ S+++++ GL + + E
Sbjct: 543 RDIQSYNIMLSGLCKRSSLSEA 564
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 215/410 (52%), Gaps = 7/410 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY I++++ ++ + LL ++ ++ +IK + +I N GR + A+
Sbjct: 229 NQFTYGPILNRMCKSGNTASALDLLRKM-EHRKIKPHVVTYTIIIDNLCKDGRLDDALSF 287
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ +V + N+L+ + R+D + ++ + K+ PNV T + LI +L
Sbjct: 288 FSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR-KITPNVVTFSALIDSLV 346
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ + A + +EM + G+ PN +T+ +++ G ++ A ++ ++ +G PD
Sbjct: 347 KEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIW 406
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L++G+ K ++ D +++ +M G+ + VTY +I+ FC+ +K A+ + +M
Sbjct: 407 TYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEM 466
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + P ++D LC+ G++E+A + ++ + D I + IIH +C K+
Sbjct: 467 VSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKV 526
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A LF +G + +YN +++G+C+ + L+EA L+ M E G EP+ TYN L
Sbjct: 527 DDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTL 586
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
I+ + + ++++EEM G + ++ ++++ L + GE+ K
Sbjct: 587 IRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML----SSGELDK 632
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 168/367 (45%), Gaps = 3/367 (0%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
H + TY II L + D S +E+ + IK + ++I ++ GR
Sbjct: 258 HRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM-ETKGIKANVFTYNSLIGSFCSFGRW 316
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + + +V + + L+++LV+ + ++ N + PN T N
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLY-NEMITRGIEPNTITYNS 375
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LC ++ A +++D M S G P++ T+ ++ G+ +++ R+F + RG
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ D TY+ L+ G+ + +L A KV EM GV P +TY ++++ C + EA
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+LD M + K + +I +C KV+DA L+ L K D + ++ L
Sbjct: 496 GILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGL 555
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK + EA LF + E G P TYNTLI ++T + +L ++M G +
Sbjct: 556 CKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDA 615
Query: 430 FTYNMLI 436
T +++
Sbjct: 616 STVKIVM 622
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 155/340 (45%), Gaps = 8/340 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+S+I +D LL ++ K P + L ++++ L +L
Sbjct: 299 NVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLY 358
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R ++ + + N+L+ L +KR D + M K P+++T NILI
Sbjct: 359 NEMITR----GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK-GCDPDIWTYNILIN 413
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK V+ +R+ +M GM+ + VT++T++ G+ + AK+VF +++ +G P
Sbjct: 414 GFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHP 473
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY +L+DG G L +A+ ++D+M +E + Y ++I C K +A +L
Sbjct: 474 GIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLF 533
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + ++ LC+ + +A L++++ PD +T+I +
Sbjct: 534 CSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRG 593
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA 413
I + +L +E +R S + ++ M S EL ++
Sbjct: 594 NDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGELDKS 633
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 108/234 (46%), Gaps = 2/234 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I+ +A+ D L ++ I + T+I+ + + + +A K F
Sbjct: 407 TYNILINGFCKAKQVDDGMRLFRKMSLRGMIA-DTVTYSTLIQGFCQSRKLIVAKKVFQE 465
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + + LL+ L N + L + HK K+ ++ NI+I +C +
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEA-LGILDQMHKCKMELDIGIYNIIIHGMCNAN 524
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A + +PS G+ ++ ++ +L G R + A +F + + G+ PD TY
Sbjct: 525 KVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYN 584
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
L+ +++ +T +V++++EM+ G + T ++++ G+ N+L
Sbjct: 585 TLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGELDKSFLNML 638
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 220/435 (50%), Gaps = 7/435 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
T+ ++IH L +L+ ++ Q C +L + TV+ G +LA+
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++EK ++ V NT+++ L + K D +F +K + P+VFT + LI LC
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCN 305
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A R+L +M + PN+VT + ++ +V G + A++++ +++ R PD T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ L++G+ RL +A + + M PN VTY +I+ FCK K+ E L +M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR V ++ +I + ++A ++K+++ P+ + ++ LCK GK+
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +F+ +R ++ P + TYN +I GMC++ ++ + L+ ++ KGV PNV YN +I
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
GFC+ G+ +E +L++M + G PN +++ LI G+ +++ + G
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Query: 497 ESDSWNFLLTRIVSD 511
S L+T ++ D
Sbjct: 606 GDASTIGLVTNMLHD 620
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 184/381 (48%), Gaps = 37/381 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ N LL+A+ + +++LV + + +++T +I I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFI 125
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G P++VT +++L GY I +A + +++ G+
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV----------------- 295
PD T+T L+ G + ++AV ++D+M G +P+ VTYG
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 296 ------------------MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+I+ CK K +A NL +M + P +I LC
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
G+ DA L ++ + P+ S +I KEGK+ EA+KL+DE + SI P + T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y++LI G C L EA +++ M+ K PNV TY+ LI+GFCK +EG+ + EM
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 457 DKGCFPNKTSFSLLIEGLYES 477
+G N +++ LI G +++
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQA 446
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 161/367 (43%), Gaps = 48/367 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY S+I L + LL+++ K NP + F +I + G+ A K
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT----FSALIDAFVKEGKLVEAEKL 350
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + K ++ + + ++L+N + R D MF+ K PNV T + LIK C
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYSTLIKGFC 409
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K VE + + EM G+V N VT+TT++ G+ D +NA+ VF ++ G P+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+DG K G+L A+ V + ++ + +EP+ TY +MIE CK
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA------------- 516
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
GKVED EL+ L K P+ +T+I C++G
Sbjct: 517 ----------------------GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY--- 432
EA L + E G +P+ TYNTLI + + L +M G + T
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 433 -NMLIQG 438
NML G
Sbjct: 615 TNMLHDG 621
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FGD++ P + L+ K+ + + + ++M+ G+ + TY +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
I FC+ K+ +A L+D M++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P + +I L K +A L +++++ C PD T+++ LCK G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 381 KLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + E+G I + ++ YNT+I G+C+ + +A L+ +M KG+ P+VFTY+ LI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ PN +FS LI+ + G E K+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
K +A +L DM++ + PS K++ + + K E L +++ D S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
I+ C+ ++ A + + + G P ++T ++L+ G C S +++A L D MVE
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G +P+ FT+ LI G A E + ++++M+ +GC P+ ++ ++ GL + G+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVK 135
N TY ++I +A+ + L E+ Q + G + + T+I + A + A
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYTTLIHGFFQARDCDNAQM 454
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F ++ V ++ + N LL+ L +N + ++F+ + + P+++T NI+I+ +
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE-YLQRSTMEPDIYTYNIMIEGM 513
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK VE + + G+ PN++ + T++ G+ +G E A + + + G +P++
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
TY L+ ++ G + +++ EM G + T G++ G+
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
KV+DA +L+ +++ P + ++ + K K L ++ + I L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
I C ++L+ A + M++ G EP++ T + L+ G+C + + ++++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P+ +F+ LI GL+ E +V G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 193/359 (53%), Gaps = 7/359 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFK--NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ NTL+ A R L+ F+ NS + P++FT N +I LCKK A +L
Sbjct: 3 TYNTLIGAYC---REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGIL 59
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
EM ++G+ P+ T+ T+L R + AK +FG++L +G VPD +++ LM + +
Sbjct: 60 IEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRN 119
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
L A+ +M+ G+ P+ V Y V++ +C+ EA + D+ML++ V
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
+++ LC+E + DA +L+ ++ + +PD +T+IH C++G + +A LF +
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239
Query: 389 GSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+I P ++ YNTLI G C+ E+ +A LWD M+ + + PN TY +LI +C +G+ E
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 299
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
R+ + M++KG P + + +I+G SG+ + + + A G + + S+N L+
Sbjct: 300 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 186/359 (51%), Gaps = 12/359 (3%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-----LVHLMFK 173
T+I Y G E A + + ++ S+ + N ++N L + RY L+ ++
Sbjct: 6 TLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML-- 63
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ P+ T N L+ C++D+ A + EM G+VP+LV+ ++++ +
Sbjct: 64 ----NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRN 119
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
++ A F D+ G VPD YTVLM GY + G + +A+K+ DEM + G + + Y
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ CK K +A L D+M++R +P +I C++G + A L+ + +
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+N PD +T+I CK G++ +A +L+D R P+ +TY LI C ++E
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 299
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A RLWD M+EKG++P + T N +I+G+C+ G++ + L M+ KG P+ S++ LI
Sbjct: 300 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 141/260 (54%), Gaps = 1/260 (0%)
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+VT+ T++G Y G +E A + + D+G P TY +++G K GR A ++
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM + G+ P+ TY ++ C+ EA+ + +ML++ VP ++ +
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYN 398
++ A ++ + + +PDN I + ++H C+ G + EA K+ DE E+G + ++ YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
T++ G+C+ LT+A +L+D+MVE+G P+ +T+ LI G C+ GN + + + M +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 459 GCFPNKTSFSLLIEGLYESG 478
P+ +++ LI+G + G
Sbjct: 241 NIKPDIVAYNTLIDGFCKVG 260
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 8/298 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTE-LKQN--PEIKCGENLFITVIRNYGLAGRP 130
S + TY++++ + R F + + E L+Q P++ +L RN L
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL---- 122
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A+ F ++KF + L++ +N L L ++ + V +V N
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM-LEALKIRDEMLEQGCVLDVIAYNT 181
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ LCK+ + A ++ DEM G +P+ T TT++ G+ G++ A +FG + R
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD Y L+DG+ K+G + A ++ D M + PN +TYG++I A+C EA
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
L D M+++ P+ C VI C G A E R++ K PD+ +T+I+
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 205/411 (49%), Gaps = 13/411 (3%)
Query: 75 SHNYDT--YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITV----IRNYGLAG 128
+H DT Y +IH L R+ D+ + +++ +K G L ++V I+ + G
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDM-----VKAGLVLDVSVYNSLIKGFCEVG 348
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R A K F F+ R + + N + L+ + + K + P+ T
Sbjct: 349 RTGEAWK-FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTF 407
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI LC+ A +L++ + G ++ ++++++ + G +A V+ +++
Sbjct: 408 GTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVK 467
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P++ Y L++G+ ++ ++ DA+K+ EM NG P +TY +I+ CK +K E
Sbjct: 468 DGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQE 527
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L +ML+R + P +I LC + KV+ A +W +L D + + +IH
Sbjct: 528 ASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIH 587
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC GK+ EA ++ E E+ P+L+TYNTL+ G E + +A LW +++ G++P
Sbjct: 588 GLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKP 647
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ TYN I+G C EG+ +L E+L G P ++S+L+ + + G
Sbjct: 648 DIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 210/474 (44%), Gaps = 44/474 (9%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
RL+ +I +++ AL P F ++ +LA + L +
Sbjct: 15 RLLELIKSERDPANALSHLELLVSTRPAFPPPQPLIFHLLRRLATSSPSHLPRLLGLLPR 74
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNKR 164
+ E+ + V+ + A P+ A+ F + VRS NTLL+A V+ +R
Sbjct: 75 MRHRPRFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARR 134
Query: 165 YDLVHLMFKNSRHKF---KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
Y F + H ++ PN+ T NI++++LC + DV+ A+ + + G+ P+ V
Sbjct: 135 YSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRV 194
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T++T++ G ++NA + ++ + G DA Y L+ G + G A+KV +++
Sbjct: 195 TYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQL 254
Query: 282 -EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
D G PN TY VM++ CK G+
Sbjct: 255 VRDPGASPNLATYKVMLDGLCK-----------------------------------LGR 279
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNT 399
++A E+W R++ N D +IH LC+ G + A +++ D + G + + YN+
Sbjct: 280 FKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNS 339
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML-DK 458
LI G CE EA + WD G+ + TYN++ +G G E +L+++ D
Sbjct: 340 LIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDA 398
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
C P+K +F LI GL E+G +++ A SG ++ S++ ++ R D
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 220/498 (44%), Gaps = 79/498 (15%)
Query: 68 GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA 127
G F + N TY+ I+ L D SL + L++ + + T++ GLA
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRR-GVAPDRVTYSTLMS--GLA 204
Query: 128 GRPEL--AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
+L A+ + + VQ N LL+ + ++ +++ PN+
Sbjct: 205 KHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNL 264
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T +++ LCK + A V M + + VT+ ++ G GD+++A RV+ D
Sbjct: 265 ATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSD 324
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGR----------------------------------L 271
++ G V D + Y L+ G+ ++GR +
Sbjct: 325 MVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMV 384
Query: 272 TDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
++A +++ ++E D P++VT+G +I C+ + A +L+D
Sbjct: 385 SEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSS 444
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
+I+ C++G+ DA E++K +++ C P++ + + +I+ C+ KI +A K++ E G
Sbjct: 445 MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504
Query: 390 SIPSLLTYNTLIAGMCESAELTEAG----------------------------------- 414
P+++TYNTLI G+C++ + EA
Sbjct: 505 CCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVAL 564
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
R+WD++++ G++ +V +N+LI G C G E I EM +K C PN +++ L++G
Sbjct: 565 RIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGF 624
Query: 475 YESGNEGEVGKVVSMATA 492
YE G+ + K S+ TA
Sbjct: 625 YEIGS---IDKAASLWTA 639
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 214/466 (45%), Gaps = 7/466 (1%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S FR + A++++ + P S N TY ++ L + F + + +
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVR-DPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
N + + +I +G + A + + + K + V N+L+ + R
Sbjct: 293 NNH-QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTG 351
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS-MGMVPNLVTHTT 225
+ ++ F + + T NI+ K L V A +L ++ + P+ VT T
Sbjct: 352 EAWKFWDST--GFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGT 409
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G G A + D + G D +Y+ +++ + K GR DA +V M +G
Sbjct: 410 LIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDG 469
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+PN Y +I FC+ K +A + +M P+ +ID LC+ K ++A
Sbjct: 470 CKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEAS 529
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGM 404
L K +L + PD +++I LC++ K+ A +++DE + G ++ +N LI G+
Sbjct: 530 SLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGL 589
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + ++ EA ++ +M EK PN+ TYN L+ GF +IG+ + + +LD G P+
Sbjct: 590 CSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDI 649
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIV 509
+++ I+GL E +++ A+G + + +W+ L+ ++
Sbjct: 650 VTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVI 695
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 141/332 (42%), Gaps = 43/332 (12%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSM-GMVPNLVTHTTILGGYVWRGDIENAKRVFGDI-- 246
+++ A + + A+ ++PS+ G P + +H T+L +V +A F +
Sbjct: 88 VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147
Query: 247 --LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
R P+ TY +++ G + AV + + GV P+ VTY ++ K
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLC-EEGKVEDACELWKRLLRKNCMPDNAIS 363
+ A +LLD+M V + A+C + C G E A ++W++L+R
Sbjct: 208 QLDNALDLLDEMPNYG-VQADAVCYNALLSGCFRTGMFEKAMKVWEQLVR---------- 256
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+ G+ P+L TY ++ G+C+ EAG +W M+
Sbjct: 257 -----------------------DPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ + TY +LI G C+ G+ R+ +M+ G + + ++ LI+G E G GE
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353
Query: 484 GKVVSMATASGSVESDSWNFLLTRIVSDLDSG 515
K SG + ++N + + LDSG
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKGL---LDSG 382
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITV--IRNYGL--AGR 129
F + TY S+I L R + D + E+ + G + + V I +GL AG+
Sbjct: 540 FKPDIRTYASLIRGLCRDKKVDVALRIWDEI-----LDAGLQVDVMVHNILIHGLCSAGK 594
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNV 185
+ A +L +++ N ++ + NTL++ + +K L + N + P++
Sbjct: 595 VDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG-----LKPDI 649
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
T N IK LC + + +L+E+ + G++P ++T + ++ + G I+
Sbjct: 650 VTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 207/404 (51%), Gaps = 8/404 (1%)
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
A + ++ +LT+ P++ + +I + G E A++ + Q +V
Sbjct: 274 AREIIQKMLTDEGLKPDLVT----YTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILY 329
Query: 153 NTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ LL++L + + D + L+++ + + P++ T +ILI LCK+ V+ AI++ EM
Sbjct: 330 SVLLSSLCKRGQVDEALQLLYEMEANNLQ--PDLVTYSILIHGLCKQGKVQQAIQLYKEM 387
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ PN H+ IL G +G + +A+ F ++ PD T Y +++DGY+KLG +
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+AV++ + D + P+ VT+ +I FCK +K EAR LL+ + PS+ +
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTL 507
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGS 390
++ CEEG + EL + K+ P + +I LCK+ K+ E+ +L ++ +G
Sbjct: 508 MNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGL 567
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P +TYNT+I C++ ++ +A L DDM+ +EP TYN+LI G C+ G+ ++ R
Sbjct: 568 APDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADR 627
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L + D+ K +++ +I+ G+ KV G
Sbjct: 628 VLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 212/458 (46%), Gaps = 60/458 (13%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
QN D +H + + F H+ + + H LAR R F + +L ++ Q E
Sbjct: 41 QNADFVADFYHLS-RNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQ-------E 92
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ ++ + A+ +++++ N++ S+++ N+LL N R+ + N
Sbjct: 93 EVASRMVHD---------ALFVLVKMKEQNLRPSIQTYNSLL----YNLRHTDIMWDVYN 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ T +I++ LC + A+ L + P++V+ TI+ Y G
Sbjct: 140 DIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLG 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+ AK F +L G +PD +Y +L+ G I G + +A+++ ++ME G++P+ VTY
Sbjct: 200 LADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYK 259
Query: 295 VMIEAF------------------------------------CKGKKSGEARNLLDDMLQ 318
++ + F C+ EA L D+L
Sbjct: 260 IVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLS 319
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ + L ++ LC+ G+V++A +L + N PD S +IH LCK+GK+ +
Sbjct: 320 SGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQ 379
Query: 379 AKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +L+ E F R P+ ++ ++ G+CE L++A +D ++ + P+V YN++I
Sbjct: 380 AIQLYKEMCFNR-IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMI 438
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G+ K+G+ +E +R+ + + DK P+ +F+ LI G
Sbjct: 439 DGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 150/346 (43%), Gaps = 39/346 (11%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L+ +I Y G E AV+ + R+ + S+ + N+L+ +N++ + ++
Sbjct: 433 LYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESI 492
Query: 176 R-HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ H + P+ T L+ A C++ ++ +L EM + P +VT+T ++ G +
Sbjct: 493 KLHGLE--PSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E + ++ D+ +G PD TY ++ + K + A +++D+M + +EP TY
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYN 610
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
V+I+ LC G VEDA + L +
Sbjct: 611 VLIDG-----------------------------------LCRYGDVEDADRVLVSLQDR 635
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
N +T+I C +G A K+F + E+G S+ Y+ +I +C+ + EA
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ M+ GV P+ + M++ F + G+ +L M+ G
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFG 741
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 2/280 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++S+I+ + R LL +K + ++ + T++ Y G + L
Sbjct: 468 TFNSLIYGFCKNRKVVEARRLLESIKLHG-LEPSAVTYTTLMNAYCEEGNINKLHELLLE 526
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ +++ +V + ++ L + ++ + + ++ R K + P+ T N +I+ CK
Sbjct: 527 MNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK-GLAPDQITYNTIIQCFCKAK 585
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A +LD+M + P T+ ++ G GD+E+A RV + DR YT
Sbjct: 586 DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYT 645
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ + G AVKV +M + G E + Y +I CK EA+ ML
Sbjct: 646 TMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSD 705
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
P + +++ G V EL +++ + D
Sbjct: 706 GVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 228/437 (52%), Gaps = 16/437 (3%)
Query: 62 QIFHYAGKFH-PNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQN--PEIKCGENLF 117
Q+F K H S N+ T + +I+ L R + + ++ +++ P++ +
Sbjct: 109 QVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVT----Y 164
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLMF 172
++I+ + R A + F+R++K +V + TL+ L + +L ++
Sbjct: 165 TSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLN 224
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
S + PN+F+ NI+I LCK + A R+ +EM G+ P++VT + ++
Sbjct: 225 GTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCK 284
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + AK+ ++ RG VPD T+T L++G+ +G L A ++ M G EP+ ++
Sbjct: 285 EGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVIS 344
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V+I +CK EA L ++ML+ P C ++ L GKV DA +L+ ++
Sbjct: 345 YTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFG-VV 403
Query: 353 RKNCMPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAEL 410
+ + +P N I S + LCK G ++EA +LF+E + ++ + ++N LI G+C++ +L
Sbjct: 404 KPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKL 463
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A L++ + ++G++P+V TY ++I GFCK G + + M + GC PN ++S L
Sbjct: 464 ETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSAL 523
Query: 471 IEGLYESGNEGEVGKVV 487
+ G Y++ EV K++
Sbjct: 524 LHGFYKNNKLEEVVKLL 540
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 173/351 (49%), Gaps = 47/351 (13%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ RS+ S N LL AL + K Y V ++K H + PN FT NILI LC +
Sbjct: 87 MMRSIISFNLLLGALAKIKHYSQVFSLYK-KMHLAGLSPNFFTLNILINCLCNVN----- 140
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
RV + + +M I+ RG++PD TYT L+ G
Sbjct: 141 -RVREGLSAMA-----------------------------GIMRRGYIPDVVTYTSLIKG 170
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
R+++A ++ M+ G PN VTYG +I+ C+ A L +ML
Sbjct: 171 LCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNG--TSP 228
Query: 325 SALCCK--------VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
A+ CK +ID LC+ GK ++A L+ ++ + PD S +I LCKEG +
Sbjct: 229 YAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMV 288
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EAKK + RG +P L T+ +LI G C +L A L+ M KG EP+V +Y +L
Sbjct: 289 IEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVL 348
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
I G+CK N +E +++ EML G +P+ +F +L++GL+ +G G+ K+
Sbjct: 349 IYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 15/402 (3%)
Query: 67 AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNY 124
AG + + TY S+I L L +++ + C N+ + T+I+
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQK---LGCWPNVVTYGTLIKGL 206
Query: 125 GLAGRPELAVKTFLRI------EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
G LA+K + N + ++ S N +++ L + ++ +F N
Sbjct: 207 CRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLF-NEMVD 265
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P+V T + LI LCK+ V A + L+ M G+VP+L T T+++ G+ GD+++
Sbjct: 266 QGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDS 325
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK +F + +G+ PD +YTVL+ GY K + +A+K+ +EM G P+ T+ V+++
Sbjct: 326 AKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLK 385
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRKNCM 357
K G+A+ L +++ VP + C V +D LC+ G + +A EL+ L N
Sbjct: 386 GLFLAGKVGDAKKLF-GVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMK 444
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
D + +I LCK K+ A +LF++ + G P ++TY +I G C++ ++ A L
Sbjct: 445 LDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANIL 504
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
+ M E G PN+ TY+ L+ GF K +E +++L +M+ K
Sbjct: 505 FQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 12/236 (5%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+++ +++ A K K + +L M P+ +I+ LC +V +
Sbjct: 92 ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAE 409
++R+ +PD +++I LC E +I EA +LF ++ G P+++TY TLI G+C +
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211
Query: 410 LTEAGRLWDDMVEK------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ A +L +M+ +PN+F+YN++I CKIG KE R+ EM+D+G P+
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR----IVSDLDSG 515
+FS LI+ L + G E K + G V D + F +V DLDS
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV-PDLFTFTSLIEGFCLVGDLDSA 326
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 173/393 (44%), Gaps = 15/393 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLAL----QIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
WP + L+ + R N++LAL ++ + + N N +Y+ II +L +
Sbjct: 193 WPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGK 252
Query: 94 FDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
+ + L E+ P++ L T+ + + + LR + +
Sbjct: 253 WKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLR----GIVPDLF 308
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ +L+ D +F + K P+V + +LI CK +VE A+++ +E
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMPSK-GYEPDVISYTVLIYGYCKTFNVEEAMKLYNE 367
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M +G P++ T +L G G + +AK++FG + + +V +DG K G
Sbjct: 368 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 427
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L +A+++ +E++ ++ + ++ +I+ CK +K A L + + Q P C
Sbjct: 428 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+I+ C+ G+V++A L++ + C P+ S ++H K K+ E KL + +
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+ + T++ M E R W D++++
Sbjct: 548 VSLAASIYTIVEDMVSK---DEKCREWLDILQR 577
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 182/358 (50%), Gaps = 16/358 (4%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
N + S LL+ L + K Y V ++ R + P+ T NIL+ LC + V
Sbjct: 91 NPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLS-GISPDCCTLNILLNCLCNVNRVGE 149
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+ V+ + G +P++VT+TT++ G I A +F + G P+A TY LM
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 264 GYIKLGRLTDAVKVMDEMEDNG------VEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
G + G ++ A+K+ EM ++ +P ++Y ++I+A CK ++ EAR+L ++M
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P+ L+ EE K L+ ++ + P+ + +I LCKEGK+
Sbjct: 270 VQGMTPTVI---SYTSLMWEEAK-----RLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 321
Query: 378 EAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EAK L + +RG +P+LLTYN+LI G C +L A L+ M KG EP+V Y +LI
Sbjct: 322 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 381
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G+CK +E +++ ML G P+ ++ L+ GL++ G G+ K+ + G
Sbjct: 382 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG 439
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 196/414 (47%), Gaps = 49/414 (11%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLM 171
+ T+I+ + R A F R++K + + TL+ L + + ++
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEML 228
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+S + P V + +I+I ALCK + A + +EM GM P ++++T+++
Sbjct: 229 NDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM---- 284
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
W E AKR+F +++++G P+ T+ VL+D K G++ +A +++ M G+ PN +
Sbjct: 285 W----EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 340
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +IE FC AR L M + P +I+ C+ KVE+A +L+ +
Sbjct: 341 TYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM 400
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLL---------------- 395
L+ PD ++ L + GK+ +AKKLF + IP L
Sbjct: 401 LQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCL 460
Query: 396 --------------------TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+N LI G+C++ +L A L++ + ++ ++P+V TYN++
Sbjct: 461 FEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIM 520
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
I FC+ G + + ++M GC P+K +++ LI G +ES +V +++ M
Sbjct: 521 IHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 574
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 206/429 (48%), Gaps = 42/429 (9%)
Query: 67 AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNY 124
AG + + TY ++I L L T +++ + C N + T+++
Sbjct: 155 AGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK---LGCTPNAITYGTLMKGL 211
Query: 125 GLAGRPELAVKTFLR------IEKFNVQRSVRSLNTLLNALVQNKRYD------------ 166
G +A+K + N + V S + +++AL +++R D
Sbjct: 212 CRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ 271
Query: 167 --------LVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
LM++ ++ F V PNV T N+LI LCK+ V A +L+ M
Sbjct: 272 GMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 331
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G+VPNL+T+ +++ G+ GD+ +A+ +F + +G PD YTVL++GY K ++
Sbjct: 332 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 391
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY-VPSSALCCKV 331
+A+K+ + M G P+ TYG ++ +G K G+A+ L M + Y +P +
Sbjct: 392 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM--KVYGIPGDLYIYGI 449
Query: 332 -IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
++ LC+ G + +A EL+ +L N D + +I LCK GK+ A +LF++ +
Sbjct: 450 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE 509
Query: 391 I-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ P ++TYN +I C ++ +A L+ M + G P+ TY LI+GF + ++ +
Sbjct: 510 LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV 569
Query: 450 RILEEMLDK 458
+L M+ +
Sbjct: 570 ELLHMMVQR 578
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 191/402 (47%), Gaps = 27/402 (6%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLAL----QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P + L+ + R N+ +AL ++ + + + NF +Y II L + R
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
D L E+K + + TVI L E A + F + VQ +V + N
Sbjct: 259 DEARDLFEEMKV-------QGMTPTVISYTSLMW--EEAKRLFNEMVNQGVQPNVVTFNV 309
Query: 155 LLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
L++ L + + DL+ +M + +VPN+ T N LI+ C D+ A +
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRG-----IVPNLLTYNSLIEGFCLVGDLNSARELFVS 364
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
MPS G P+++ +T ++ GY +E A +++ +L G PD TY L+ G + G+
Sbjct: 365 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ DA K+ M+ G+ + YG+ + CK EA L + + + Y + C
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL--KSYNIKLDIECF 482
Query: 331 --VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
+ID LC+ GK+E A EL+++L ++ PD + +IH C+ G++ +A LF + E+
Sbjct: 483 NCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 542
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
G P +TY TLI G ES +L + L MV++ V +V
Sbjct: 543 NGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 371 CKEGKIWEAKKLFDEFE----RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
CK G I A + F F P L ++ L++G+ + ++ L++ M G+
Sbjct: 70 CKTGNI-TAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS 128
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
P+ T N+L+ C + EG+ ++ +L +G P+ +++ LI+GL
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGL 176
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 183/363 (50%), Gaps = 37/363 (10%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L +A+ + K+YDLV L F + +++T I+I C+K + A VL
Sbjct: 102 FNRLCSAVARTKQYDLV-LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRA 160
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G P+ +T +T++ G+ G + A + +++ PD T + L++G GR+
Sbjct: 161 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 220
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
++A+ ++D M + G +P+EVTYG ++ CK S A +L M +R S V
Sbjct: 221 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 280
Query: 332 IDLLCEEGKVEDACELW-----------------------------------KRLLRKNC 356
ID LC++G +DA L+ + ++ +N
Sbjct: 281 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 340
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD S +I KEGK+ EAK+L++E RG P +TYN+LI G C+ L EA +
Sbjct: 341 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 400
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++D MV KG EP++ TY++LI +CK +G+R+ E+ KG PN +++ L+ G
Sbjct: 401 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 460
Query: 476 ESG 478
+SG
Sbjct: 461 QSG 463
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 230/458 (50%), Gaps = 12/458 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA-RARAFDAVESL--LTELKQNPE 109
R++ L A + A K + + T+ ++++ R +AV + + E+KQ P+
Sbjct: 146 RKKKLLFAFSVLGRAWKL--GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 203
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
+ T+I L GR A+ R+ ++ Q + +LN L ++ L
Sbjct: 204 LVT----VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+F+ + + +V +I+I +LCK + A+ + +EM G+ ++VT+++++GG
Sbjct: 260 DLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ ++ +++ R +PD T++ L+D ++K G+L +A ++ +EM G+ P+
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+TY +I+ FCK EA + D M+ + P +I+ C+ +V+D L++
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+ K +P+ +T++ C+ GK+ AK+LF E RG PS++TY L+ G+C++
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
EL +A +++ M + + + YN++I G C + + + DKG P+ +++
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 558
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
++I GL + G+ E + G D ++N L+
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 205/404 (50%), Gaps = 3/404 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + TY ++++L ++ L ++++ IK + VI + G + A
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDA 293
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F +E ++ V + ++L+ L + ++D M + + ++P+V T + LI
Sbjct: 294 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALID 352
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
K+ + A + +EM + G+ P+ +T+ +++ G+ + A ++F ++ +G P
Sbjct: 353 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 412
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY++L++ Y K R+ D +++ E+ G+ PN +TY ++ FC+ K A+ L
Sbjct: 413 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 472
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M+ R PS ++D LC+ G++ A E+++++ + I + IIH +C
Sbjct: 473 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 532
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
K+ +A LF ++G P ++TYN +I G+C+ L+EA L+ M E G P+ FTY
Sbjct: 533 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 592
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
N+LI+ + ++EEM G + ++ ++I+ L +
Sbjct: 593 NILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 636
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 38/353 (10%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L N +V K D + L S + + +P N L A+ + + + M
Sbjct: 71 LRNGIVDIKVNDAIDLF--ESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 128
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ ++ T T ++ Y + + A V G G+ PD T++ L++G+ GR+++A
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V ++D M + P+ VT +I C + EA L+D M++ + P V++
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
LC+ G A +L++++ +N S +I LCK+G +A LF+E E +G
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308
Query: 394 LLTYNTLIAGMC-----------------------------------ESAELTEAGRLWD 418
++TY++LI G+C + +L EA L++
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+M+ +G+ P+ TYN LI GFCK E ++ + M+ KGC P+ ++S+LI
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 421
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 190/380 (50%), Gaps = 4/380 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I G A+K +I+ + V NT+++A+ + + + +F
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMA 226
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + +V T N LI C ++ AI +L+EM + PN+ T+ ++ G +
Sbjct: 227 VK-GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ AK V +L PD TY+ LMDGY + + A V + M GV P+ TY ++
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK K EA NL +M Q+ VP +ID LC+ G++ +L + R
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM-RDRG 404
Query: 357 MPDNAIS-STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P + I+ S++I LCK G + A LF++ + I P++ T+ L+ G+C+ L +A
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ D++ KG NV+TYN++I G CK G +E + +L +M D GC PN +F +I L
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Query: 475 YESGNEGEVGKVVSMATASG 494
++ + K++ A G
Sbjct: 525 FKKDENDKAEKLLRQMIARG 544
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 181/383 (47%), Gaps = 39/383 (10%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL-VHLMFKNSRHKFKVVPNVFTCNIL 191
AV R+E +Q + +LN L+N + ++ K + + P+ T N L
Sbjct: 78 AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP--PDTVTLNTL 135
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
IK LC K V+ A+ D++ + G N V++ T++ G GD A + I R
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLT 195
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD Y ++D K +++A + EM G+ + VTY +I FC K EA
Sbjct: 196 KPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIG 255
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD------------ 359
LL++M+ + P+ ++D LC+EGKV++A + +L+ PD
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 360 ------------NAIS-----------STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
NA+S + +I+ CK + EA LF E ++ +P ++
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY++LI G+C+S ++ L D+M ++G +V TY+ LI G CK G+ I + +M
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 456 LDKGCFPNKTSFSLLIEGLYESG 478
D+ PN +F++L++GL + G
Sbjct: 436 KDQEIRPNIFTFTILLDGLCKGG 458
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 168/315 (53%), Gaps = 1/315 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V N +I A+CK V A + EM G+ ++VT+ T++ G+ G ++ A +
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGL 256
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ + P+ TY +L+D K G++ +A V+ M V+P+ +TY +++ +
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A+++ + M P +I+ C+ V++A L+K + +KN +P
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S++I LCK G+I L DE +RG ++TY++LI G+C++ L A L++ M
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++ + PN+FT+ +L+ G CK G K+ + +++L KG N +++++I G + G
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 482 EVGKVVSMATASGSV 496
E ++S +G +
Sbjct: 497 EALTMLSKMEDNGCI 511
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 135/256 (52%), Gaps = 1/256 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++++A F +L P + ++D + K+ + AV + +E G++P+ +T
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I FC + ++L +L+R Y P + +I LC +G+V+ A +LL +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
+ +T+I+ +CK G A K + + R + P ++ YNT+I MC+ ++EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ +M KG+ +V TYN LI GFC +G KE I +L EM+ K PN ++++L++
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 474 LYESGNEGEVGKVVSM 489
L + G E V+++
Sbjct: 279 LCKEGKVKEAKSVLAV 294
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 36/332 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + N ++ + K A+ + + G+ P+L+T ++ + G I V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 243 FGDILDRGWVPDATT-----------------------------------YTVLMDGYIK 267
IL RG+ PD T Y L++G K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+G A+K + +++ +P+ V Y +I+A CK + EA L +M +
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I C GK+++A L ++ K P+ + ++ LCKEGK+ EAK +
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ + P ++TY+TL+ G E+ +A +++ M GV P+V TY +LI GFCK
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + + +EM K P ++S LI+GL +SG
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 36/279 (12%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV+T NIL+ ALCK+ V+ A VL M + P+++T++T++ GY +++ A+ V
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F + G PD TYT+L++G+ K + +A+ + EM + P VTY +I+ CK
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +L+D+M R +ID LC+ G ++ A L+ ++ + P+
Sbjct: 387 SGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF------------------------------------ 386
+ ++ LCK G++ +A+++F +
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ G IP+ T+ T+I + + E +A +L M+ +G+
Sbjct: 507 DNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 202/424 (47%), Gaps = 39/424 (9%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
L A + V S + P+ C N + +I GR + + F ++ + +
Sbjct: 11 LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDC 70
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+VR+ +++AL ++ R +F R + PN+ T ++I A+CK+ +E
Sbjct: 71 YPTVRTYTVIVHALFESGRRMEAINLFSEMRER-GCEPNIHTYTVMINAMCKETKLEEGR 129
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF---------------------- 243
R+LDEM G+VP++ T+ ++ GY G +E A+ +
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGF 189
Query: 244 -------------GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+L+ P TY L+ G K+G L A ++++ M +NGV P++
Sbjct: 190 CRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQ 249
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
TY V I+ CK + EA L + + ++ + + +ID C+ GK++DA L R
Sbjct: 250 WTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDR 309
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+L ++C+P+++ + +I LCKE K+ EA L + ++G ++ TY LI M + +
Sbjct: 310 MLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGD 369
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
A R+ D MV G +P+V+ Y I FC GN KE ++ M ++G P+ +++L
Sbjct: 370 FDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTL 429
Query: 470 LIEG 473
+I+
Sbjct: 430 VIDA 433
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 2/309 (0%)
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+DV A V + MP G N V++T ++ G G ++ +F + + P TY
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
TV++ + GR +A+ + EM + G EPN TY VMI A CK K E R +LD+M++
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ VPS +ID C+EG VE A E+ + +C P+ + +I C++ +
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L + E PS++TYN+LI G C+ L A RL + M E GV P+ +TY++ I
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSV 496
CK G +E + + +KG N+ ++ LI+G ++G + ++ M T
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317
Query: 497 ESDSWNFLL 505
S ++N L+
Sbjct: 318 NSSTYNALI 326
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 209/423 (49%), Gaps = 23/423 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I L + + L LK+ IK E ++ +I Y AG+ + A R
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKG-IKANEVIYTALIDGYCKAGKMDDANSLLDR 309
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + N L++ L + ++ L+ ++ K + V T ILI A+ K+
Sbjct: 310 MLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK-GLKCTVPTYTILIVAMLKEG 368
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D + A R+LD+M S G P++ +T + + RG+I+ A+ + + +RG +PDA TYT
Sbjct: 369 DFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYT 428
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++D Y LG L A V+ M D G +P+ TY +I ++LL + L +
Sbjct: 429 LVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI------------KHLLKEELTK 476
Query: 320 KYVPSSALCCKVIDLLCEE-------GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
KY + ALC + ++ + K E A EL++++L C P+ + +I LCK
Sbjct: 477 KY-KNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCK 535
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ A+KLFD ERG PS YN+L+ CE +A RL M+E G P + +
Sbjct: 536 VGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLES 595
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
N+L G + G+ ++ + +L G ++ ++ +LI+GL ++G +++ +
Sbjct: 596 LNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVME 655
Query: 492 ASG 494
A G
Sbjct: 656 ARG 658
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 227/502 (45%), Gaps = 88/502 (17%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTF 137
TY I+H L + R +A+ +L +E++ E C N+ TV+ N A E ++
Sbjct: 76 TYTVIVHALFESGRRMEAI-NLFSEMR---ERGCEPNIHTYTVMIN---AMCKETKLEEG 128
Query: 138 LRIEKFNVQR----SVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCN 189
RI V++ SV + N L++ + +++ LM NS + PN T N
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCN-----PNERTYN 183
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI C+K +V A+ +L +M + P++VT+ +++ G G +++A R+ + +
Sbjct: 184 ELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNEN 243
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G VPD TY+V +D K GR+ +A + + +++ G++ NEV Y +I+ +CK K +A
Sbjct: 244 GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDA 303
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC------------- 356
+LLD ML +P+S+ +ID LC+E KV++A L + +++K
Sbjct: 304 NSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVA 363
Query: 357 ----------------------MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPS 393
PD I + IH C G I EA+ + FERG +P
Sbjct: 364 MLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ--------------GF 439
LTY +I L A + M + G +P+ TY+ LI+
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVAL 483
Query: 440 C---------------KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
C K+ + + + E+ML+ GC PN +++ LI GL + G G
Sbjct: 484 CDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQ 543
Query: 485 KVVSMATASGSVESDS-WNFLL 505
K+ G S++ +N LL
Sbjct: 544 KLFDHMNERGVSPSEAIYNSLL 565
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 261 LMDGYIKLGRLTD---------AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+++GY KLG L + A V + M G NEV+Y +I C+ + E N
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ M + P+ ++ L E G+ +A L+ + + C P+ + +I+ +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KE K+ E +++ DE E+G +PS+ TYN LI G C+ + A + D M PN
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TYN LI GFC+ N + +L +ML+ P+ +++ LI G + G +++++
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240
Query: 491 TASGSVESDSWNF 503
+G V D W +
Sbjct: 241 NENGVV-PDQWTY 252
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 1/186 (0%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
N+F + + + E A++ F ++ + ++ + L+ L + R + +F +
Sbjct: 489 NVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDH 548
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ V P+ N L+ C+ A+R++ M G +P L + + G G
Sbjct: 549 MNER-GVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEG 607
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
E AK VF ++L G+ D + +L+DG +K G +++ ME G + + TY
Sbjct: 608 SKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYR 667
Query: 295 VMIEAF 300
++IE
Sbjct: 668 MLIEGL 673
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 143/357 (40%), Gaps = 37/357 (10%)
Query: 7 QKITAPSCLLQSI--GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIF 64
+K+ L++S+ G +C++ T T+ L+ + ++ + D A +I
Sbjct: 333 RKVQEALLLMESMIQKGLKCTVPTYTI---------------LIVAMLKEGDFDYAHRIL 377
Query: 65 H--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
+ + P+ Y + IH E +++ + + + + VI
Sbjct: 378 DQMVSSGYQPDVY----IYTAFIHAFCTRGNIKEAEDMMSMMFERG-VMPDALTYTLVID 432
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ---NKRYDLVHLMFKNSRHKF 179
YG G A R+ S + + L+ L++ K+Y V L
Sbjct: 433 AYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALC-------- 484
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+PNVF ++ + K E A+ + ++M G PN+ T+ ++ G G + A
Sbjct: 485 DSIPNVFFADV--ADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVA 542
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+++F + +RG P Y L++ +LG DAV+++ M ++G P + V+
Sbjct: 543 QKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCG 602
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ +A+ + ++LQ Y +ID L + G + EL + + C
Sbjct: 603 LYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGC 659
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 186/349 (53%), Gaps = 13/349 (3%)
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILI 192
F I K ++ +V S NTL+N ++ D L M +N +V P+VFT ++LI
Sbjct: 248 FGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMEN-----RVFPDVFTYSVLI 302
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK+ ++ A ++ EM G+VPN VT TT++ G+ G + ++ +L +G
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L++G K+G L +A K++ EM G++P++ TY ++I+ CK A +
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M++ + +I C EG+V +A + +L PD+A + +IH CK
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+G + KL E + G +P ++TYN L+ G+C+ ++ A L D M+ GV P+ T
Sbjct: 483 KGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
YN+L++G CK GN ++ ++ E KG + S++ LI L ++ E
Sbjct: 543 YNILLEGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLIGDLRKTCKE 588
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V N L++ L + + + L+F K + P V + N LI CK +++ R+
Sbjct: 225 VCKFNVLMHRLCKEHKINEAQLLF-GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
M + P++ T++ ++ G G +++A ++F ++ DRG VP+ T+T L++G+
Sbjct: 284 RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVT 343
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR +++ +M GV+P+ +TY +I CK EA+ L+ +M QR P
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FE 387
+ID C+EG +E A E+ K ++++ DN + +I C+EG++ EA++ E E
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE 463
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P TY +I G C+ ++ +L +M G P V TYN+L+ G CK G K
Sbjct: 464 AGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKN 523
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+L+ ML+ G P+ ++++L+EG + GN + K+ S
Sbjct: 524 ANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQS 564
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 217/471 (46%), Gaps = 5/471 (1%)
Query: 39 PQRLYPKRLVSMI-FRQQNLDLALQIFHYAGKFHPNFSHNY-DTYHSIIHKLARARAFDA 96
P L P L+S + L I Y H +H S++ + + ++
Sbjct: 78 PHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNS 137
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
S+ T + + +F ++ Y +G A++ F + K N+Q S L
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L++ F P+V N+L+ LCK+ + A + E+ G+
Sbjct: 198 DRLMKLNLTSPA-WAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P +V+ T++ GY G+++ R+ +++ PD TY+VL++G K G+L DA K
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ EM D G+ PN+VT+ +I C ++ + ML++ P +I+ LC
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLL 395
+ G + +A +L + ++ PD + +I CKEG + A ++ E + I +
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+ LI+G C ++ EA R +M+E G++P+ TY M+I GFCK G+ K G ++L+EM
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
G P ++++L+ GL + G ++ G V D ++N LL
Sbjct: 497 QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 166/298 (55%), Gaps = 5/298 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P+V T L++ LC+ + A +L +P + N+V T++ G + G + A
Sbjct: 279 MPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCLTEGKLARATE 334
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ + +G PD TY++LM G KLGR AV+++DEME+ G PN VTY ++ +FC
Sbjct: 335 LYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 394
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ +AR +LD ML + + +S +I LC++GK++ A L + + + C PD
Sbjct: 395 RNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDIC 454
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T+I+ LC + EA+ +F E G + + +TYNTLI + + E RL +M
Sbjct: 455 TYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEM 514
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G + +V +YN LI+ CK GN + +LEEM+ KG PN S+++LI L ++G
Sbjct: 515 LLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAG 572
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 171/332 (51%), Gaps = 6/332 (1%)
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+F V S RS N +L+ L + + L+++ + +V P FT + +ALC+
Sbjct: 134 RRFAVSPSFRSYNVVLSTLARADCHADALLLYRRML-RDRVPPTTFTFGVAARALCRLGR 192
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
A+ +L M G VP+ V + T++ V +G + A + ++L G D T+
Sbjct: 193 AGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFND 252
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G LGR+ +A +++D M G P+ VTYG +++ C+ +++ EA +L + +
Sbjct: 253 LVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVN 312
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
V + VI EGK+ A EL++ + K C PD S ++H LCK G+ A
Sbjct: 313 VV----MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAV 368
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
++ DE E+G P+++TY+TL+ C + +A + D M+ KG N YN +I
Sbjct: 369 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYAL 428
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
CK G + R+++EM +GC P+ +++ +I
Sbjct: 429 CKDGKLDQATRLVQEMKSQGCKPDICTYNTMI 460
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 170/329 (51%), Gaps = 2/329 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T +IL+ LCK A+R+LDEM G PN+VT++T+L + G ++A+ +
Sbjct: 346 PDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 405
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L +G+ ++ Y ++ K G+L A +++ EM+ G +P+ TY MI C
Sbjct: 406 LDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCN 465
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
EA ++ ++++ V + +I L G+ ++ L +L C D
Sbjct: 466 NDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVIS 525
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I LCKEG + + L +E +G P+ +YN LI +C++ ++ +A L +M+
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+G+ P++ TYN LI G CK+G + +LE++ ++ P+ ++++LI +
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 645
Query: 482 EVGKVVSMATASGSVESD-SWNFLLTRIV 509
+ ++ A + G V ++ +W ++ V
Sbjct: 646 DAAMLLDKAISGGIVPNERTWGMMVQNFV 674
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 172/334 (51%), Gaps = 6/334 (1%)
Query: 112 CGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
C ++ I +GL GR AV+ +E+ ++ + +TLL++ +N +D
Sbjct: 344 CPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDAR 403
Query: 170 LMFKNSRHK-FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
M K F + N N +I ALCK ++ A R++ EM S G P++ T+ T++
Sbjct: 404 AMLDQMLAKGFSM--NSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIY 461
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
+E A+ +F ++++ G V + TY L+ ++ GR + +++ EM +G +
Sbjct: 462 HLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQL 521
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ ++Y +I+A CK + LL++M+ + P++ +I+ LC+ GKV DA EL
Sbjct: 522 DVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELS 581
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCES 407
K +L + PD +T+I+ LCK G A L ++ ++ P ++TYN LI+ C+
Sbjct: 582 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 641
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
L +A L D + G+ PN T+ M++Q F +
Sbjct: 642 RLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 35/376 (9%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
D + L+ +RH VP+ +I AL + V A +LDEM MG ++ T
Sbjct: 195 DALALLRGMARHG--CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFND 252
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK----------LGRLTD-- 273
++ G G + A R+ ++ +G +P TY L+ G + LGRL +
Sbjct: 253 LVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVN 312
Query: 274 -------------------AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
A ++ + M G P+ TY +++ CK + G A +LD
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLD 372
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M ++ P+ ++ C G +DA + ++L K ++ + II+ LCK+G
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432
Query: 375 KIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ +A +L E + +G P + TYNT+I +C + + EA ++ +++E+GV N TYN
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYN 492
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATA 492
LI + G +EG+R+ EML GC + S++ LI+ L + GN + + + M T
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTK 552
Query: 493 SGSVESDSWNFLLTRI 508
+ S+N L+ +
Sbjct: 553 GIKPNNFSYNMLINEL 568
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 45/268 (16%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
FS N Y+ II+ L + D L+ E+K P+I C N I + N L
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDI-CTYNTMIYHLCNNDLMEEA 472
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCN 189
E + IE+ V + + NTL++AL++N R+ + + L + H ++ +V + N
Sbjct: 473 EHIFRNL--IEEGVVANGI-TYNTLIHALLRNGRWQEGLRLASEMLLHGCQL--DVISYN 527
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LIKALCK+ +V+ ++ +L+EM + G+ PN ++ ++ G + +A + ++L++
Sbjct: 528 GLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ 587
Query: 250 GWVPDATTYTVLMDGYIKLG-----------------------------------RLTDA 274
G PD TY L++G K+G L DA
Sbjct: 588 GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 647
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++D+ G+ PNE T+G+M++ F +
Sbjct: 648 AMLLDKAISGGIVPNERTWGMMVQNFVR 675
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 193/375 (51%), Gaps = 3/375 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F R+ + + LL A+V+ Y +F + K + P++ T ILI
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK-GISPSIATFTILI 97
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ A +L + G PNLVT TI+ G+ G I A ++L +G++
Sbjct: 98 NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
D TY L++G K G++ A+ ++ EME + V+PN V Y +I+ CK +A L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ +R + + +ID C G+ ++ +L +++R+N PD+ + +I LCK
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG+I EA+ + +RG P ++TYN L+ G C + EA L++ MV++G+EP+V
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MA 490
YN+LI G+CK E + + +E+ +K P S++ LI+GL SG V K++ M
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397
Query: 491 TASGSVESDSWNFLL 505
++ + ++N L+
Sbjct: 398 GSAQPPDVVTYNILI 412
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 198/397 (49%), Gaps = 5/397 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I+ L++ A LL E++++ ++ ++ +I G A+ +
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQ 220
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
I + + + N+L++ R+ ++ L+ K R V P+ +T NILI ALCK+
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN--VDPDDYTFNILIDALCKE 278
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A VL M G P++VT+ ++ GY R ++ A+ +F ++ RG PD Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
VL+DGY K + +A+ + E+ + + P +Y +I+ C + + LLD+M
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +ID LC+EG++ +A + +++K P+ + ++ C +
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AK +F+ + + P +L YN LI G C++ + EA L+ +M K + P++ +YN LI
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G C +G +L+EM D G P+ ++++L++
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 1/364 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + F R+ K ++ V + N L++ + K D ++FK +K +VP + + N LI
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-NLVPTIASYNSLI 377
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC + ++LDEM P++VT+ ++ G I A V ++ +G
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +MDGY + A + + M +G+EP+ + Y V+I +CK + EA L
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M + +P A +ID LC G++ EL + PD + ++ CK
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557
Query: 373 EGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+A LF + G P T + ++ +C+ +L A ++ G PNV TY
Sbjct: 558 TQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTY 617
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+LI CK G+ E + +L +M D P+ +F ++I L + + K+ A
Sbjct: 618 TILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIA 677
Query: 493 SGSV 496
G V
Sbjct: 678 RGLV 681
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 146/309 (47%), Gaps = 2/309 (0%)
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ +V+ A+ + M + P +LG V G A +F + +G P
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+T+L++ Y A ++ + +G +PN VT+ +I FC +A + +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+L + Y+ +I+ L + G+++ A L + + + + P+ + S +I LCK+G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A L + ERG + +TYN+LI G C E +L MV + V+P+ +T+N+
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI CK G E +L M +G P+ +++ L+EG N E ++ + G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 495 SVESDSWNF 503
+E D N+
Sbjct: 331 -LEPDVLNY 338
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 223/446 (50%), Gaps = 9/446 (2%)
Query: 70 FHPNFSHNYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGL 126
F + N T++++IH L +A +AV + + + C +LF TV+
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG----CQPDLFTYGTVVNGLCK 216
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G +LA+ ++EK ++ V T+++AL K + +F +K + PNV
Sbjct: 217 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVV 275
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI+ LC A R+L +M + PN+VT + ++ +V G + A++++ ++
Sbjct: 276 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 335
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ R PD TY+ L++G+ RL +A + + M PN VTY +I+ FCK K+
Sbjct: 336 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 395
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
E L +M QR V ++ +I L + G + A +++K+++ PD S +
Sbjct: 396 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 455
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LCK GK+ +A +F+ ++ + P + TYN +I GMC++ ++ + L+ + KGV
Sbjct: 456 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 515
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+PNV Y +I GFC+ G +E + EM + G PN +++ LI G++ +
Sbjct: 516 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 575
Query: 486 VVSMATASGSVESDSWNFLLTRIVSD 511
++ + G V S ++ ++ D
Sbjct: 576 LIKEMRSCGFVGDASTISMVINMLHD 601
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 2/357 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
R++ + + S N L+N + + L L K P++ T + L+ C
Sbjct: 89 RMQNLRISYDLYSYNILINCFCRRSQLPLA-LAVLGKMMKLGYEPDIVTLSSLLNGYCHG 147
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A+ ++D+M M PN VT T++ G A + ++ RG PD TY
Sbjct: 148 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 207
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++G K G + A+ ++ +ME +E + V Y +I+A C K +A NL +M
Sbjct: 208 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 267
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P+ +I LC G+ DA L ++ + P+ S +I KEGK+ E
Sbjct: 268 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 327
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+KL+DE + SI P + TY++LI G C L EA +++ M+ K PNV TYN LI+
Sbjct: 328 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 387
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
GFCK +EG+ + EM +G N +++ LI+GL+++G+ K+ + G
Sbjct: 388 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 232/450 (51%), Gaps = 17/450 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARA 93
+P P + +L+S I + DL + + G+ N +YD +Y+ +I+ R
Sbjct: 59 RPLPSIVEFNKLLSAIAKMNKFDLVISL----GERMQNLRISYDLYSYNILINCFCRRSQ 114
Query: 94 FD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
AV + +L P+I +L + Y R AV ++ Q +
Sbjct: 115 LPLALAVLGKMMKLGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMFVMEYQPNTV 170
Query: 151 SLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ NTL++ L + NK + V L+ + + P++FT ++ LCK+ D++ A+ +L
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTVVNGLCKRGDIDLALSLLK 228
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + ++V +TTI+ ++ +A +F ++ ++G P+ TY L+ G
Sbjct: 229 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 288
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +DA +++ +M + + PN VT+ +I+AF K K EA L D+M++R P
Sbjct: 289 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 348
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I+ C ++++A +++ ++ K+C P+ +T+I CK ++ E +LF E +R
Sbjct: 349 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 408
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G + + +TYNTLI G+ ++ + A +++ MV GV P++ TY++L+ G CK G ++
Sbjct: 409 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 468
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + E + P+ +++++IEG+ ++G
Sbjct: 469 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG+++ +P + L+ K+ + + + + M++ + + +Y +
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
+I FC+ GK+ EA L+D M +
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P++ +I L K +A L R++ + C PD T+++ LCK G I A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 381 KLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + E+G I + ++ Y T+I +C + +A L+ +M KG+ PNV TYN LI+
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ PN +FS LI+ + G E K+
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVK 135
N TY+++I +A+ + L E+ Q + G + + T+I+ AG ++A K
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYNTLIQGLFQAGDCDMAQK 435
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F ++ V + + + LL+ L + + + ++F+ K K+ P+++T NI+I+ +
Sbjct: 436 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPDIYTYNIMIEGM 494
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK VE + + G+ PN++ +TT++ G+ +G E A +F ++ + G +P++
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 554
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
TY L+ ++ G + +++ EM G + T ++I G+
Sbjct: 555 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
K +A +L +M+Q + +PS K++ + + K + L +R+ D +
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I+ C+ ++ A + + + G P ++T ++L+ G C ++EA L D M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+PN T+N LI G A E + +++ M+ +GC P+ ++ ++ GL + G+
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 219
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F R+ S+ LL+ + + RYD+V +F+ + + P + TCNI++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ-ILGIPPLLCTCNIVM 125
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+C A L +M +G P+LVT T++L GY IE+A +F IL G+
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TYT L+ K L AV++ ++M NG PN VTY ++ C+ + G+A L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L DM++R+ P+ +ID + GK+ +A EL+ +++ + PD ++I+ LC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EA+++F ER G P+ + Y TLI G C+S + + +++ +M +KGV N T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y +LIQG+C +G + +M + P+ ++++L++GL +G
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 203/435 (46%), Gaps = 9/435 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAG--KFHPNFSHNYDTYHSIIHKLARARA 93
+P P + RL+S+I + D+ + +F P H + RA
Sbjct: 78 RPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA 137
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
+ +L P++ F +++ Y R E A+ F +I + +V +
Sbjct: 138 -SCFLGKMMKLGFEPDLV----TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
TL+ L +N+ + +F N PNV T N L+ LC+ A +L +M
Sbjct: 193 TLIRCLCKNRHLNHAVELF-NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+ PN++T T ++ +V G + AK ++ ++ PD TY L++G G L +
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A ++ ME NG PNEV Y +I FCK K+ + + +M Q+ V ++ +I
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP- 392
C G+ + A E++ ++ + PD + ++ LC GK+ +A +F+ + +
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+++TY +I GMC+ ++ +A L+ + KG++PNV TY +I GFC+ G E +
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 453 EEMLDKGCFPNKTSF 467
++M + G PN++ +
Sbjct: 492 KKMKEDGFLPNESVY 506
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+A +F ++ +P +T L+ K+ R + + ++M+ G+ P T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ C + A L M++ + P +++ C ++EDA L+ ++L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
P+ +T+I LCK + A +LF++ GS P+++TYN L+ G+CE +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L DM+++ +EPNV T+ LI F K+G E + M+ +P+ ++ LI G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 474 LYESGNEGEVGKVVSMATASG 494
L G E ++ + +G
Sbjct: 303 LCMYGLLDEARQMFYLMERNG 323
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 2/254 (0%)
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
W+ ++Y ++ + + DA+ + M + P+ + + ++ K +
Sbjct: 44 WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVI 103
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L + M P C V+ +C + A ++++ PD +++++
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C +I +A LFD+ G P+++TY TLI +C++ L A L++ M G PNV
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN L+ G C+IG + +L +M+ + PN +F+ LI+ + G E ++ ++
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 490 ATASGSVESDSWNF 503
SV D + +
Sbjct: 284 MIQM-SVYPDVFTY 296
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 183/363 (50%), Gaps = 37/363 (10%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L +A+ + K+YDLV L F + +++T I+I C+K + A VL
Sbjct: 73 FNRLCSAVARTKQYDLV-LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRA 131
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G P+ +T +T++ G+ G + A + +++ PD T + L++G GR+
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
++A+ ++D M + G +P+EVTYG ++ CK S A +L M +R S V
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 332 IDLLCEEGKVEDACELW-----------------------------------KRLLRKNC 356
ID LC++G +DA L+ + ++ +N
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD S +I KEGK+ EAK+L++E RG P +TYN+LI G C+ L EA +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++D MV KG EP++ TY++LI +CK +G+R+ E+ KG PN +++ L+ G
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 476 ESG 478
+SG
Sbjct: 432 QSG 434
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 230/458 (50%), Gaps = 12/458 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA-RARAFDAVESL--LTELKQNPE 109
R++ L A + A K + + T+ ++++ R +AV + + E+KQ P+
Sbjct: 117 RKKKLLFAFSVLGRAWKL--GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
+ T+I L GR A+ R+ ++ Q + +LN L ++ L
Sbjct: 175 LVTVS----TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+F+ + + +V +I+I +LCK + A+ + +EM G+ ++VT+++++GG
Sbjct: 231 DLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ ++ +++ R +PD T++ L+D ++K G+L +A ++ +EM G+ P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+TY +I+ FCK EA + D M+ + P +I+ C+ +V+D L++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+ K +P+ +T++ C+ GK+ AK+LF E RG PS++TY L+ G+C++
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
EL +A +++ M + + + YN++I G C + + + DKG P+ +++
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
++I GL + G+ E + G D ++N L+
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 205/404 (50%), Gaps = 3/404 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + TY ++++L ++ L ++++ IK + VI + G + A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F +E ++ V + ++L+ L + ++D M + + ++P+V T + LI
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALID 323
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
K+ + A + +EM + G+ P+ +T+ +++ G+ + A ++F ++ +G P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY++L++ Y K R+ D +++ E+ G+ PN +TY ++ FC+ K A+ L
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M+ R PS ++D LC+ G++ A E+++++ + I + IIH +C
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
K+ +A LF ++G P ++TYN +I G+C+ L+EA L+ M E G P+ FTY
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
N+LI+ + ++EEM G + ++ ++I+ L +
Sbjct: 564 NILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 38/353 (10%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L N +V K D + L S + + +P N L A+ + + + M
Sbjct: 42 LRNGIVDIKVNDAIDLF--ESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ ++ T T ++ Y + + A V G G+ PD T++ L++G+ GR+++A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V ++D M + P+ VT +I C + EA L+D M++ + P V++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
LC+ G A +L++++ +N S +I LCK+G +A LF+E E +G
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 394 LLTYNTLIAGMC-----------------------------------ESAELTEAGRLWD 418
++TY++LI G+C + +L EA L++
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+M+ +G+ P+ TYN LI GFCK E ++ + M+ KGC P+ ++S+LI
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 223/446 (50%), Gaps = 9/446 (2%)
Query: 70 FHPNFSHNYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGL 126
F + N T++++IH L +A +AV + + + C +LF TV+
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG----CQPDLFTYGTVVNGLCK 232
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G +LA+ ++EK ++ V T+++AL K + +F +K + PNV
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVV 291
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI+ LC A R+L +M + PN+VT + ++ +V G + A++++ ++
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ R PD TY+ L++G+ RL +A + + M PN VTY +I+ FCK K+
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
E L +M QR V ++ +I L + G + A +++K+++ PD S +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LCK GK+ +A +F+ ++ + P + TYN +I GMC++ ++ + L+ + KGV
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+PNV Y +I GFC+ G +E + EM + G PN +++ LI G++ +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 486 VVSMATASGSVESDSWNFLLTRIVSD 511
++ + G V S ++ ++ D
Sbjct: 592 LIKEMRSCGFVGDASTISMVINMLHD 617
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 2/357 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
R++ + + S N L+N + + L L K P++ T + L+ C
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLA-LAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A+ ++D+M M PN VT T++ G A + ++ RG PD TY
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++G K G + A+ ++ +ME +E + V Y +I+A C K +A NL +M
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P+ +I LC G+ DA L ++ + P+ S +I KEGK+ E
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+KL+DE + SI P + TY++LI G C L EA +++ M+ K PNV TYN LI+
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
GFCK +EG+ + EM +G N +++ LI+GL+++G+ K+ + G
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 232/450 (51%), Gaps = 17/450 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARA 93
+P P + +L+S I + DL + + G+ N +YD +Y+ +I+ R
Sbjct: 75 RPLPSIVEFNKLLSAIAKMNKFDLVISL----GERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 94 FD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
AV + +L P+I +L + Y R AV ++ Q +
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 151 SLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ NTL++ L + NK + V L+ + + P++FT ++ LCK+ D++ A+ +L
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + ++V +TTI+ ++ +A +F ++ ++G P+ TY L+ G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +DA +++ +M + + PN VT+ +I+AF K K EA L D+M++R P
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I+ C ++++A +++ ++ K+C P+ +T+I CK ++ E +LF E +R
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G + + +TYNTLI G+ ++ + A +++ MV GV P++ TY++L+ G CK G ++
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + E + P+ +++++IEG+ ++G
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG+++ +P + L+ K+ + + + + M++ + + +Y +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
+I FC+ GK+ EA L+D M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P++ +I L K +A L R++ + C PD T+++ LCK G I A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 381 KLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + E+G I + ++ Y T+I +C + +A L+ +M KG+ PNV TYN LI+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ PN +FS LI+ + G E K+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVK 135
N TY+++I +A+ + L E+ Q + G + + T+I+ AG ++A K
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F ++ V + + + LL+ L + + + ++F+ K K+ P+++T NI+I+ +
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPDIYTYNIMIEGM 510
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK VE + + G+ PN++ +TT++ G+ +G E A +F ++ + G +P++
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
TY L+ ++ G + +++ EM G + T ++I G+
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
K +A +L +M+Q + +PS K++ + + K + L +R+ D +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I+ C+ ++ A + + + G P ++T ++L+ G C ++EA L D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+PN T+N LI G A E + +++ M+ +GC P+ ++ ++ GL + G+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 188/397 (47%), Gaps = 36/397 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +F R+ + S+ LL ++ + K Y V L F V PNV+T NILI
Sbjct: 29 ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTV-LSLSTQMDSFGVPPNVYTLNILI 87
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ C + V A VL ++ +G P+ T TT++ G G I A +F ++D G+
Sbjct: 88 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 147
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L++G K+G + A++++ ME +P+ V Y +I++ CK ++ EA NL
Sbjct: 148 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 207
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M+ + P ++ LC + + L +++ +PD I ST++ LCK
Sbjct: 208 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 267
Query: 373 EGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGK+ EA ++ D +RG P ++TY TL+ G C +E+ EA +++D MV KG P+V +
Sbjct: 268 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 327
Query: 432 YNMLIQGFCK-----------IGNAKE-----------------------GIRILEEMLD 457
Y LI K IG KE G +L EM++
Sbjct: 328 YTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVN 387
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
PN FS +++ L + G E VV M G
Sbjct: 388 SKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG 424
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 159/316 (50%), Gaps = 6/316 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ L+ ++ K + + +M S G+ PN+ T ++ + + A V
Sbjct: 43 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
IL G PD TT+T L+ G G++ +A+ + D+M D G +PN VTYG +I CK
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A LL M Q P + +ID LC++ +V +A L+ +++ + PD
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++H LC + L ++ I P ++ ++T++ +C+ ++TEA + D M+
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++GVEP+V TY L+ G C E +++ + M+ KG P+ S++ LI + G
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG--- 339
Query: 482 EVGKVVSMATASGSVE 497
G +VS+ G V+
Sbjct: 340 --GGLVSLQEVIGLVK 353
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 2/269 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P + L+ K+ + + + +M+ GV PN T +
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +FC + G A ++L +L+ + P +I LC EGK+ +A L+ +++ +
Sbjct: 86 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P+ T+I+ LCK G A +L E+G+ P ++ Y ++I +C+ ++TEA
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ MV +G+ P++FTY L+ C + K +L +M++ P+ FS +++ L
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNF 503
+ G E ++V M G VE D +
Sbjct: 266 CKEGKVTEAHEIVDMMIQRG-VEPDVVTY 293
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 127/278 (45%), Gaps = 41/278 (14%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A++ +E+ N Q V +++++L ++++ +F +
Sbjct: 155 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 214
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P++FT L+ ALC + + +L++M + ++P++V +T++ G +
Sbjct: 215 -GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 273
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + ++ RG PD TYT LMDG+ + +AVKV D M G P+ ++Y +I
Sbjct: 274 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 333
Query: 299 AFCKGKKSG-------------------------------------EARNLLDDMLQRKY 321
A GKK G + R LL++M+ K
Sbjct: 334 A---GKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKI 390
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+P+ + V+D LC+EGKV +A ++ ++++ P+
Sbjct: 391 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 231/501 (46%), Gaps = 49/501 (9%)
Query: 11 APSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKF 70
A L +S+ A +LS + V P + P L P L++ + +L+++
Sbjct: 19 AALALFKSVLSADKALSPLAVLPHLDGAPSSL-PNLLLTASAAVRPHATSLRLYSRMKSL 77
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
S + H ++ L A AF +L ++ + C F ++R+ AG+P
Sbjct: 78 SLPISTA--SLHPLLSALPSAPAF----ALFADMFRLRLPLC-TTTFNIMLRHLCSAGKP 130
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
A++ ++ + N + NT++ R + + R + + PN +T
Sbjct: 131 ARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGT 186
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+I CK V+ A++V DEM + G V P V + ++GGY +G ++ A +++R
Sbjct: 187 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 246
Query: 250 G-----------------------------------WVPDATTYTVLMDGYIKLGRLTDA 274
G PD TY +L++G+ K G + A
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+++ + M GV VTY +I A K + E L D+ ++R P L +I+
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
G ++ A E+ + +K PD+ +T++ LC G++ EA+KL DE ERG P
Sbjct: 367 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
L+TYNTLI+G ++ +A R+ ++M+ KG P + TYN LIQG CK G + +++
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 486
Query: 454 EMLDKGCFPNKTSFSLLIEGL 474
EM++ G P+ +++ LIEGL
Sbjct: 487 EMVENGITPDDSTYISLIEGL 507
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 224/487 (45%), Gaps = 83/487 (17%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE-LAVKTFLRIEKFNVQ 146
LA ++ + + L+ L P + + ++ A RP +++ + R++ ++
Sbjct: 21 LALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLP 80
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
S SL+ LL+AL + L MF R + + F NI+++ LC A+
Sbjct: 81 ISTASLHPLLSALPSAPAFALFADMF---RLRLPLCTTTF--NIMLRHLCSAGKPARALE 135
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGY 265
+L +MP PN VT+ T++ G+ RG ++ A + ++ +RG + P+ TY ++ G+
Sbjct: 136 LLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 191
Query: 266 IKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAFC-KGK------------------- 304
K+GR+ +AVKV DEM G V+P V Y +I +C +GK
Sbjct: 192 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 251
Query: 305 ---------------KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+ EA L+++M + P +I+ C+EG V+ A E+++
Sbjct: 252 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 311
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI------------------ 391
+ R+ + +I+ L K+G++ E KLFDE R I
Sbjct: 312 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 371
Query: 392 ------------------PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
P +TYNTL+ G+C + EA +L D+M E+G++P++ TYN
Sbjct: 372 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
LI G+ G+ K+ +RI EM++KG P +++ LI+GL ++G + +V +
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 491
Query: 494 GSVESDS 500
G DS
Sbjct: 492 GITPDDS 498
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 172/371 (46%), Gaps = 20/371 (5%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q LD+ ++ G + N TY ++I + D + E+ E+K
Sbjct: 162 QAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 216
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVH 169
++ +I Y G+ + A+ R+ + V +V + N L++AL + R Y+LV
Sbjct: 217 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 276
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
M + P+VFT NILI CK+ +V+ A+ + + M G+ +VT+T ++
Sbjct: 277 EMGGKG-----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 331
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
+G ++ ++F + + RG PD Y L++ + G + A ++M EME + P+
Sbjct: 332 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+VTY ++ C + EAR L+D+M +R P +I +G V+DA +
Sbjct: 392 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 451
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
++ K P + +I LCK G+ +A+ + E E G P TY +LI G+
Sbjct: 452 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT--- 508
Query: 409 ELTEAGRLWDD 419
TE R DD
Sbjct: 509 --TEDERAIDD 517
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 175/343 (51%), Gaps = 2/343 (0%)
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
L +E + +V + N +++ L+Q+ + + + F R + P+V T N L+ CK
Sbjct: 332 LEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR-AMGLQPDVITYNSLLNGYCK 390
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A+ + ++ G+ P ++T+ ++ GY GD+E A+R+ +++++G +PD T
Sbjct: 391 AGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCT 450
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT+LM G L A + DEM G++P+ Y I A +A L + M+
Sbjct: 451 YTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMM 510
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ +ID LC+ G + DA +L +++ PD + +IH C+ G +
Sbjct: 511 LEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLR 570
Query: 378 EAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA+K F D G PS +TY I C L A + M+E+GVEPN TYN+LI
Sbjct: 571 EARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 630
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
C+ G + R EML++G PNK +++LLI+G + GN
Sbjct: 631 HALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGN 673
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 171/351 (48%), Gaps = 2/351 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G+ E A F+ + +Q V + N+LLN + L+F + RH + P V
Sbjct: 356 SGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHA-GLAPTVL 414
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NILI C+ D+E A R+ +EM G +P++ T+T ++ G + A+ F ++
Sbjct: 415 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM 474
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L +G PD Y + + LG + A ++ + M G+ + VTY ++I+ CK
Sbjct: 475 LSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNL 534
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A++L M+ P +I CE G + +A + +K ++ P +
Sbjct: 535 NDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVF 594
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
IH C+ G ++ A F + E G P+ +TYN LI +C + A R + +M+E+G+
Sbjct: 595 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGL 654
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
PN +TY +LI G CK GN ++ +R EM G P+ + L +G E
Sbjct: 655 VPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDE 705
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 166/339 (48%), Gaps = 3/339 (0%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDD 200
+ ++ S+ + NTLL++ ++ R D V ++ K + +PN T N++I L +K D
Sbjct: 230 QLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGD 289
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +++ M + + T+ ++ G + +G ++ A + ++ + G +P TY
Sbjct: 290 LEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNA 348
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G ++ G++ A EM G++P+ +TY ++ +CK EA L D+
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P+ +ID C G +E+A L + ++ + C+PD + ++ + A+
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ FDE +G P YNT I + +A RL + M+ +G+ + TYN+LI G
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK GN + + +M+ G P+ +++ LI E G
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERG 567
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 41/341 (12%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P+V CN +++ L + V EM +G+ P++VT+ T
Sbjct: 198 VAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNT--------------- 242
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED--NGVEPNEVTYGVMIE 298
L+D ++K GR ++ EME +G PN+VT+ V+I
Sbjct: 243 --------------------LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVIT 282
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ EA +++ M K SS +I L +G V+ A +L + + MP
Sbjct: 283 GLARKGDLEEAAEMVEGMRLSKKA-SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMP 341
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +IH L + G++ A+ F E G P ++TYN+L+ G C++ L EA L+
Sbjct: 342 TVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLF 401
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D+ G+ P V TYN+LI G+C++G+ +E R+ EEM+++GC P+ ++++L++G + +
Sbjct: 402 GDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNA 461
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGA 518
+ + + G ++ D + + TRI ++L GA A
Sbjct: 462 CSLAMAREFFDEMLSKG-LQPDCFAY-NTRIRAELTLGAIA 500
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 126/250 (50%), Gaps = 8/250 (3%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
F ++ G PD ++ R D V EM G+EP+ VTY ++++F
Sbjct: 189 AFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFL 248
Query: 302 KGKKSGEARNLLDDMLQRKY--VPSSALCCKVIDLLCEEGKVEDACELWK--RLLRKNCM 357
K ++ + LL +M R +P+ VI L +G +E+A E+ + RL +K
Sbjct: 249 KEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKK--- 305
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRL 416
+ + +I L +G + +A L E E G +P+++TYN +I G+ +S ++ A
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ +M G++P+V TYN L+ G+CK G+ KE + + ++ G P ++++LI+G
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425
Query: 477 SGNEGEVGKV 486
G+ E ++
Sbjct: 426 LGDLEEARRL 435
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 171 MFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ + +R FK + P+ T + I A C++ ++ A +M G+ PN +T+
Sbjct: 568 LLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 627
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ G + A R F ++L+RG VP+ TYT+L+DG K G DA++ EM N
Sbjct: 628 VLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQN 687
Query: 285 GVEPNEVTYGVMIEAFCKG 303
G+ P+ +T+ + + F +G
Sbjct: 688 GIHPDYLTHKALFKGFDEG 706
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 216/440 (49%), Gaps = 21/440 (4%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLL-----TELKQNPEIK 111
++ + F +A P F HN + + R F +SLL T+ + + +
Sbjct: 67 NILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHLS 126
Query: 112 C------GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
+ L T I Y +G+P A + F ++++ ++ ++ + NTLLN+LV RY
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RY 183
Query: 166 DLVH-LMFK----NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
H + F N K +VPNV T NI+I C ++ + A+ L+ M P+
Sbjct: 184 PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDN 243
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ TIL +G + +A+ + D+ RG +P+ TY +L+ GY K+G L +A V++
Sbjct: 244 VTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M N + P+ TY ++I C + EA L D+M K +P +I+ E K
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNT 399
+ +A +L + + K P+ + ++ W CKEGK+ +A + E G P +TYNT
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G C++ + EA R D+M K ++ + T N +++ C+ +E ++L +G
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 460 CFPNKTSFSLLIEGLYESGN 479
F ++ S+ LI G ++ GN
Sbjct: 484 YFIDEVSYGTLIVGYFKDGN 503
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 202/361 (55%), Gaps = 9/361 (2%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+++ LM +N+ ++P+V+T N+LI LC + +E A ++ DEM ++ ++P++V++ T
Sbjct: 299 NVIELMTQNN-----LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G + I A ++ ++ ++G P+A T+ +++ Y K G++ DA + +ME++G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
P+ VTY +I +CK GEA +D+M ++ S ++ LC E K+E+A
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
+L ++ D T+I K+G + A KL+DE E+ IPS +TYN +I G+
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ + +A ++++E G+ P+ TYN ++ G+C+ G+ ++ + +M++ P+
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDE 521
+ ++L+ GL G + K+ + + G ++++ ++N L+T + + LD L E
Sbjct: 594 FTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 522 L 522
+
Sbjct: 654 M 654
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 212/473 (44%), Gaps = 40/473 (8%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
A++ + GK+ N S + TY++I+ L + LL ++K + N +
Sbjct: 227 AVEFLNVMGKY--NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLP-NRNTYNI 283
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++ Y G + A + + N+ V + N L+N L R + ++
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEA-FKLRDEMENL 342
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K++P+V + N LI + + A ++L+EM G+ PN VTH ++ Y G +++A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ + G+ PD TY L++GY K G + +A + MDEM ++ + VT ++
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462
Query: 300 FCKGKKSGEARNLL-----------------------------------DDMLQRKYVPS 324
C+ KK EA LL D+M +++ +PS
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ +I LC+ GK E A LL +PD +TI+H C+EG + +A + +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 385 EFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ S P + T N L+ G+C L +A +L++ V KG + TYN LI CK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +L EM +K P+ +++ +I L +SG E + +S G++
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNL 695
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 178/380 (46%), Gaps = 27/380 (7%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHK 178
+++ Y G+ + A T ++E+ + NTL+N + + M + R
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
K+ + T N +++ LC++ +E A ++L G + V++ T++ GY G+++
Sbjct: 449 MKM--DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDR 506
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +++ ++ ++ +P TY ++ G + G+ A+ ++E+ ++G+ P+E TY ++
Sbjct: 507 ALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILH 566
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C+ +A + M++ + P C ++ LC EG +E A +L+ + K
Sbjct: 567 GYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAI 626
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D +T+I LCKEG++ +A L E E + P TYN +I + +S + EA
Sbjct: 627 DTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFM 686
Query: 418 DDMVEKGVEPN-----------------------VFTYNMLIQGFCKIGNAKEGIRILEE 454
M+EKG P+ Y+ I+ C G K+ +RI E
Sbjct: 687 SKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGE 746
Query: 455 MLDKGCFPNKTSFSLLIEGL 474
KG +K+++ L++GL
Sbjct: 747 SKQKGITVDKSTYINLMDGL 766
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 4/246 (1%)
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE---A 309
P + Y++ G+ A ++ +M+ + PN +T ++ + + S +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
R +D ++ VP+ VI C E K +DA E + + NC PDN +TI+
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 370 LCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK+G++ +A+ L D RG +P+ TYN L+ G C+ L EA + + M + + P+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
V+TYNMLI G C G +E ++ +EM + P+ S++ LI G E E K++
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 489 MATASG 494
+ G
Sbjct: 373 EMSEKG 378
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 136/351 (38%), Gaps = 92/351 (26%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y AG A +T + + N++ +LNT+L L + K+ + + + ++R
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 177 HK----------------FK------------------VVPNVFTCNILIKALCKKDDVE 202
+ FK ++P+ T N +I LC+ E
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR-------------VFG-DILD 248
AI L+E+ G++P+ T+ TIL GY GD+E A + VF +IL
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 249 RG----------------WVP-----DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
RG WV D TY L+ K GRL DA ++ EME+ +
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL-------------------- 327
P+ TY +I A + EA + ML++ +P L
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSS 720
Query: 328 ---CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ I LC EGK +DA ++ +K D + ++ L K K
Sbjct: 721 SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 29/289 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ F+ N+D AL+++ + + TY+ II L + + S L EL +
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKE--KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + E + T++ Y G E A + ++ + + + V + N LL L +
Sbjct: 552 SGLLP-DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+F K K + V T N LI +LCK+ ++ A +L EM + P+ T+ I
Sbjct: 611 KALKLFNTWVSKGKAIDTV-TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDAT-----------------------TYTVLMD 263
+ G I A+ +L++G +PD Y+ +
Sbjct: 670 ITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIK 729
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK--SGEAR 310
G+ DA+++ E + G+ ++ TY +++ K +K S EAR
Sbjct: 730 ELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 226/450 (50%), Gaps = 34/450 (7%)
Query: 27 STITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIH 86
+T T+ P K P+ + + +++I R+ + AL+IF+ + FSHN TY +I+H
Sbjct: 114 ATTTMVEPRKK-PKFISHESAINLIKRETDPQRALEIFNRVAE-QRGFSHNNATYATILH 171
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQ 146
KLA+++ F A++++L ++ K E +F+ +++++ E V+ F I +
Sbjct: 172 KLAKSKKFQAIDAVLHQMTYE-TCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVRE 230
Query: 147 R-SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ S+++++T LN LV++ + + K D++ A
Sbjct: 231 KPSLKAISTCLNLLVESNQSSIT---------------------------AKNGDIDSAF 263
Query: 206 RVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMD 263
V++EM S PNL+T++T++ G G ++ A +F +++ + + PDA TY L++
Sbjct: 264 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 323
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ ++ A+K+M+ M+ NG PN Y ++ FCK + EA+ + D+M P
Sbjct: 324 GFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKP 383
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ +I+ C G+V++A EL K + C D + I+ LC+EG+ EA +
Sbjct: 384 DTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGML 443
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ G + +Y ++ +C EL +A +L M+ +GV P+ T N L+ C+
Sbjct: 444 ERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEA 503
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
G + + L +L+ G P S++LL+E
Sbjct: 504 GKVGDAVMALLGLLELGFKPEPNSWALLVE 533
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 267 KLGRLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K G + A +V++EM+ + V PN +TY +I C + EA L ++M+ + +
Sbjct: 255 KNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPD 314
Query: 326 ALCCK-VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
AL +I+ C KV+ A ++ + + + C P+ S +++ CKEG++ EAK++FD
Sbjct: 315 ALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFD 374
Query: 385 EFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E + G P + Y TLI C + + EA L DM E + T+N+++ G C+ G
Sbjct: 375 EMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREG 434
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+E +LE + +G + NK S+ +++ L G + ++V + G
Sbjct: 435 RFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRG 485
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 149/324 (45%), Gaps = 21/324 (6%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILD-RGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P ++H + + D + A +F + + RG+ + TY ++ K +
Sbjct: 125 PKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDA 184
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCK---GKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
V+ +M + +E + +++ F K ++ E + + +++ K PS ++
Sbjct: 185 VLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREK--PSLKAISTCLN 242
Query: 334 LLCEE---------GKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLF 383
LL E G ++ A E+ + + + + N I+ ST+I+ LC G++ EA +LF
Sbjct: 243 LLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELF 302
Query: 384 DEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+E + +P LTYN LI G C ++ A ++ + M + G PNVF Y+ L+ GFCK
Sbjct: 303 EEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCK 362
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDS 500
G +E + +EM G P+ ++ LI +G E +++ M ++ +
Sbjct: 363 EGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVT 422
Query: 501 WNFLLTRIVSD--LDSGAGALDEL 522
+N +L + + + G L+ L
Sbjct: 423 FNVILGGLCREGRFEEAXGMLERL 446
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 118/248 (47%), Gaps = 6/248 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF--ITVIRNYGLAGRPELAVKTF 137
TY+++I+ D ++ +K+N C N+F ++ + GR E A + F
Sbjct: 317 TYNALINGFCHGXKVDRALKIMEFMKKN---GCNPNVFNYSALMNGFCKEGRLEEAKEVF 373
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ ++ TL+N + R D + K+ K + T N+++ LC+
Sbjct: 374 DEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXEN-KCRADTVTFNVILGGLCR 432
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E A +L+ +P G+ N ++ +L G+++ A ++ G +L RG +P T
Sbjct: 433 EGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFAT 492
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ + G++ DAV + + + G +P ++ +++E C+ +K A LLDD++
Sbjct: 493 SNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 552
Query: 318 QRKYVPSS 325
++ + S+
Sbjct: 553 IQEPILSN 560
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 160/293 (54%), Gaps = 1/293 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ +T N LI+ LC + A+ VLD+M G VP++VT+T +L R + A ++
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ +G PD TY V+++G + GR+ DA++ + + +G EPN V+Y ++++ C
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A L+ +M Q+ Y P+ +I LC G VE A E+ ++ + C P++
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLS 333
Query: 363 SSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ I+H CK+ K+ A + RG P +++YNTL+ +C E+ A L +
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+KG P + +YN +I G K G KE + +L EM+ KG P+ ++S + GL
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 206/430 (47%), Gaps = 6/430 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++++ DA L+ ++ P+ + T+IR GR A+ +
Sbjct: 127 YNAMVAGYCVTGQLDAARRLVADMPMEPD----SYTYNTLIRGLCGRGRTGNALVVLDDM 182
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V + LL A + Y + R K P++ T N+++ +C++
Sbjct: 183 LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK-GCAPDIITYNVVVNGICQEGR 241
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ AI L +PS G PN V++ +L G E+A+++ ++ +G+ P+ T+ +
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + G + A++V+D++ G PN ++Y ++ AFCK KK A ++ M+ R
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P ++ LC G+V+ A EL +L K C P +T+I L K GK EA
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+L +E +G P ++TY+T+ +G+C + EA R + + + G+ PN YN ++ G
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
CK I + M+ GC PN++++++LIEGL G E +++ + G V
Sbjct: 482 CKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKG 541
Query: 500 SWNFLLTRIV 509
N R++
Sbjct: 542 LINKAAIRLL 551
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 168/351 (47%), Gaps = 37/351 (10%)
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM------- 211
L N R + H S + VP+ N ++ L ++ D+E A+R+++ M
Sbjct: 36 LTPNSRLNFAHAGVAASPN---AVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSA 92
Query: 212 ---PSMGMV--------------------PNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
P ++ P+++ + ++ GY G ++ A+R+ D+
Sbjct: 93 APGPCAALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADM-- 150
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
PD+ TY L+ G GR +A+ V+D+M G P+ VTY +++EA CK +
Sbjct: 151 -PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A LLD+M + P V++ +C+EG+V+DA E K L C P+ + ++
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC + +A+KL E ++G P+++T+N LI+ +C + A + D + + G P
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
N +YN ++ FCK + +E M+ +GC+P+ S++ L+ L G
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGG 380
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 163/350 (46%), Gaps = 9/350 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++ + + LL E++ C ++ + V+ GR + A++
Sbjct: 193 TYTILLEATCKRSGYKQAMKLLDEMRAK---GCAPDIITYNVVVNGICQEGRVDDAIEFL 249
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + S N +L L +R+ D LM + S+ + PNV T N+LI LC
Sbjct: 250 KSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP--PNVVTFNMLISFLC 307
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ VE A+ VLD++P G PN +++ IL + + ++ A ++ RG PD
Sbjct: 308 RRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIV 367
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y L+ + G + AV+++ +++D G P ++Y +I+ K K+ EA LL++M
Sbjct: 368 SYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEM 427
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + P + LC E ++E+A + ++ P+ + + I+ LCK +
Sbjct: 428 VTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRET 487
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
A LF G +P+ TY LI G+ + EA L ++ +GV
Sbjct: 488 HNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 147/300 (49%), Gaps = 14/300 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAV 134
N +Y+ ++ L A ++ E L+ E+ Q P N+ I+ + GL E A+
Sbjct: 260 NTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLV---EPAM 316
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNI 190
+ +I K+ + S N +L+A + K+ D V LM SR + P++ + N
Sbjct: 317 EVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV--SRGCY---PDIVSYNT 371
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ ALC+ +V+ A+ +L ++ G P L+++ T++ G G + A + +++ +G
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY+ + G + R+ +A++ +++D G+ PN V Y ++ CK +++ A
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAI 491
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L M+ +P+ + +I+ L EG V++A EL L + + I+ I L
Sbjct: 492 DLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLL 551
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 16/179 (8%)
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE---FERGSIPSLLTYNTLIAGMCESAELT 411
N +P A+S+ + L + G + EA +L + E + P LI +C S
Sbjct: 54 NAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCA--ALIKKLCASGRTA 111
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA R V EP+V YN ++ G+C G R++ +M + P+ +++ LI
Sbjct: 112 EARR-----VLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLI 163
Query: 472 EGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
GL G G V+ G V + ++ LL S LDE+ K C
Sbjct: 164 RGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGC 222
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 208/453 (45%), Gaps = 37/453 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++++ R +LL +K++ I + + T++ + G + A K
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVES 303
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +R+ N L L Q + D + +P+V T N L+ A K
Sbjct: 304 MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWR 363
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+R+L+EM G+ P LVTH ++ G +E A I + G PD TY
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYN 423
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVE-------------------------------- 287
L+D Y K G + A +MDEM G++
Sbjct: 424 TLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483
Query: 288 ---PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
P+EV+YG ++ A+ K A L D M++RK +PS + +I LC ++++A
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAG 403
+ L+ K +PD + IIH CKEG + A + ++ S P ++T NTL+ G
Sbjct: 544 IDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNG 603
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C +L +A +L++ VEKG + +V TYN LIQ CK+G+ + ++M KG P+
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++++++ L E+G E ++ SG +
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKL 696
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 74/424 (17%)
Query: 130 PELAVKTFLRIEKFN-VQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFT 187
P LA + + + V+ S+++ N +L+AL ++ L S + ++ PN +T
Sbjct: 151 PHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYT 210
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+L+ C K + A+ L M G+ P+ VT+ T+L + +G + A+ + +
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK-- 305
G P TY L+ + +LG + A KV++ M G EP+ TY V+ C+ K
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330
Query: 306 ----------------------------------SGEARNLLDDMLQRKYVPSSALCCKV 331
S +A LL++M + P+ V
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF----- 386
+ LC+EGK+E+A +++ + PD +T+I CK G + +A L DE
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 387 -------------------------------ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+RG +P ++Y T++A + A R
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
LWD M+E+ + P++ TYN LI+G C++ KE I L E+++KG P++T+++++I
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC 570
Query: 476 ESGN 479
+ G+
Sbjct: 571 KEGD 574
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 181/396 (45%), Gaps = 46/396 (11%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNS 175
V+++ G+ E A+ +I + + V + NTL++A + K + L+ M
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
K+ + FT N ++ LCK E A +L P G VP+ V++ T++ Y +
Sbjct: 450 ---LKM--DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E A R++ +++R +P +TY L+ G ++ RL +A+ ++E+ + G+ P+E TY +
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I A+CK A + M++ + P C +++ LC GK++ A +L++ + K
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
D +T+I +CK G + A FD+ E +G P TYN +++ + E+ EA
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684
Query: 415 RLWDDMVEKGVEPNVF------------------------------------TYNMLIQG 438
+ + + G F TY + G
Sbjct: 685 NMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNG 744
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
C G KE +L+EM+ KG + +++ L+EGL
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 131/264 (49%), Gaps = 2/264 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K++P++ T N LIK LC+ + ++ AI L+E+ G+VP+ T+ I+ Y GD+ENA
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
R +++ + PD T LM+G G+L A+K+ + + G + + +TY +I++
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK A + DDM + P + V+ L E G+ E+A + +L +
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ 698
Query: 360 NAISSTIIHWLCKEGKI--WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ + E + E K + E+ +L TY + G+C +L EA +
Sbjct: 699 SFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVL 758
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCK 441
D+M++KG+ + TY L++G K
Sbjct: 759 DEMMQKGMPVDSSTYITLMEGLIK 782
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKV--EDA 344
P + A+ + + A LL + +R+ V PS V+ L + +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
++++ L+ P++ + ++H C +G + +A + G P +TYNTL+
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C L EA L M G+ P TYN L+ F ++G K+ +++E M G P+
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312
Query: 464 KTSFSLLIEGLYESGNEGEVGKV 486
++++L GL ++G E ++
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRL 335
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 45/313 (14%)
Query: 32 TPPIKPW-PQRLYPKRLVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKL 88
+PP + + P + +++ F++ N + AL+++ K P+ S TY+++I L
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS----TYNTLIKGL 534
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
R L EL + + E + +I Y G E A + ++ + + +
Sbjct: 535 CRMERLKEAIDKLNELVEKGLVP-DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V + NTL+N L + + D +F++ K K V +V T N LI+++CK DV+ A+
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV-DVITYNTLIQSMCKVGDVDTALHFF 652
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV---------------- 252
D+M G+ P+ T+ +L G E A + + D G +
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE 712
Query: 253 ---------PDAT-----------TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
P+A TY ++G G+L +A V+DEM G+ + T
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSST 772
Query: 293 YGVMIEAFCKGKK 305
Y ++E K +K
Sbjct: 773 YITLMEGLIKRQK 785
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+ T+N L+ C L +A M G+ P+ TYN L+ C+ G E +
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIV 509
L M G P + +++ L+ G + KVV TA G E D ++N L +
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG-FEPDLRTYNVLAVGLC 324
Query: 510 SDLDSGAGALDE 521
AG +DE
Sbjct: 325 Q-----AGKVDE 331
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRL--WDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
RG PSL N +++ + S L + ++E + PN +T+N+L+ C G
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFL 504
+ + L M G P+ +++ L+ G GE +++ G + ++N L
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 505 LT 506
++
Sbjct: 285 VS 286
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 184/381 (48%), Gaps = 10/381 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKN 174
T+I GR A++ R++ VQ + N +++ + + N +DL M
Sbjct: 171 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
++ P+VFT N LI + AI + ++M + PN+ T ++ G+ G
Sbjct: 231 -----RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG 285
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+ +AK V ++ PD TY LMDGY + ++ A + D M GV N Y
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
M+ FCK K EA NL ++M RK +P+ +ID LC+ G++ A +L + +
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
P+ S+I+ LCK + +A L ++G P + TY LI G+C+S L +A
Sbjct: 406 GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDA 465
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+++D++ KG +V+ Y ++IQGFC G + + +L +M D GC PN ++ L+I
Sbjct: 466 QNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILS 525
Query: 474 LYESGNEGEVGKVVSMATASG 494
L+E K++ G
Sbjct: 526 LFEKDENDTAEKLLREMIVRG 546
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 163/328 (49%), Gaps = 2/328 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +L++LV+ K + L + + FT NILI + + + ++
Sbjct: 64 FNKILSSLVKAKHHSTA-LSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKI 122
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G P +T T++ G +G I A ++ +G+ D +Y L++G K+GR+
Sbjct: 123 LKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRI 182
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
T A++++ ++ V+PN V Y ++I+ CK K +A +L M+ ++ P +
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
I K+ A +L+ ++ ++N P+ + ++ CKEGK+ +AK + + I
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302
Query: 392 -PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P ++TYN+L+ G C ++ +A ++D M GV NV Y ++ GFCKI E I
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ EEM + PN ++S LI+GL + G
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLG 390
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 177/354 (50%), Gaps = 19/354 (5%)
Query: 81 YHSIIHKLARAR----AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+ II + +A+ AFD ++ + + P++ + +I + + A+
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAK-RICPDVFT----YNALISGFSAVSKLNYAIDL 258
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILI 192
F +++K N+ +V + N L++ + + + ++ +M K+ + P+V T N L+
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD-----IKPDVVTYNSLM 313
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C + V A + D M S G++ N+ +TT++ G+ ++ A +F ++ R +
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY+ L+DG KLGR+ A+K++DEM D G PN VTY +++A CK +A L
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L ++ + P +I LC+ G++EDA +++ LL K D + +I C
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCD 493
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+G +A L + E G IP+ TY +I + E E A +L +M+ +G+
Sbjct: 494 KGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 129/263 (49%), Gaps = 4/263 (1%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L + P + ++ +K + A+ + +ME NG+E + T+ ++I F +
Sbjct: 52 LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ + ++ +L++ Y P++ +I LC +G + A +++ + D T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ LCK G+I A +L + + P+ + YN +I MC++ + +A L+ MV K
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ P+VFTYN LI GF + I + +M + PN +F++L++G + G +
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVND-A 290
Query: 485 KVVSMATASGSVESD--SWNFLL 505
KVV ++ D ++N L+
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLM 313
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++++ + + D +L E++ +I + ++I GR A+K
Sbjct: 340 NVQIYTTMVNGFCKIKMVDEAINLFEEMRCR-KIIPNVVTYSSLIDGLCKLGRIFYALKL 398
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ ++ + +++L+AL +N D + N + + + P+++T ILIK LC
Sbjct: 399 VDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQ-GIRPDMYTYTILIKGLC 457
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E A V +++ G ++ +T ++ G+ +G + A + + D G +P+A
Sbjct: 458 QSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAK 517
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEM 281
TY +++ + A K++ EM
Sbjct: 518 TYELVILSLFEKDENDTAEKLLREM 542
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 188/359 (52%), Gaps = 2/359 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF T I + G+ E AVK F ++E+ V +V + NT+++ L RYD MFK
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA-FMFKEK 320
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + P + T +IL+K L + + A VL EM G PN++ + ++ ++ G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + ++ +G ++TY L+ GY K G+ +A +++ EM G N+ ++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I C A + +ML R P L +I LC+ GK A ELW + L K
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ D S+ ++H LC+ GK+ EA ++ E RG + ++YNTLI+G C +L EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+MV++G++P+ +TY++LI G + +E I+ ++ G P+ ++S++I+G
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 181/356 (50%), Gaps = 6/356 (1%)
Query: 152 LNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
L TL++ L ++ ++ + L F+ F V + T N L+ LC+ ++ A R+ E
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ G V + V++ T++ G + ++ A +++ RG PD TY++L+ G + +
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A++ D+ + NG+ P+ TY VMI+ CK +++ E + D+M+ + P++ +
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+I C G++ A EL + + K P++A +++I + ++ EAK LF+E G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ Y LI G + ++ + L +M K V PN TY ++I G+ + GN E
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
R+L EM +KG P+ ++ I G + G E K + +E WN L+
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIE--GWNKLI 824
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 185/412 (44%), Gaps = 14/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++ L RA+ +L E+ + P + NL + I L + +K
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL--NKAIEIKD 389
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKAL 195
+ + ++ S + NTL+ +N + D + K F V FT I + L
Sbjct: 390 LMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL--L 445
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C + A+R + EM M P TT++ G G A ++ L++G+V D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T L+ G + G+L +A ++ E+ G + V+Y +I C KK EA LD+
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++R P + +I L KVE+A + W R +PD S +I CK +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
E ++ FDE ++ P+ + YN LI C S L+ A L +DM KG+ PN TY
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
LI+G I +E + EEM +G PN ++ LI+G G G++ KV
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY---GKLGQMVKV 734
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 166/347 (47%), Gaps = 5/347 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ TCNIL+ +L + ++ + D + G+ P++ TT + + G +E A
Sbjct: 222 MFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F + + G P+ T+ ++DG GR +A ++M + G+EP +TY ++++
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K+ G+A +L +M ++ + P+ + +ID E G + A E+ ++ K +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +T+I CK G+ A++L E G + ++ ++I +C A R +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ + + P LI G CK G + + + + L+KG + + + L+ GL E+G
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 480 EGEVGKVVSMATASGSV-ESDSWNFLLTRIVS--DLDSGAGALDELL 523
E ++ G V + S+N L++ LD LDE++
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF + ++G P TT +L+ ++ + D + GV P+ + I AFC
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFC 271
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
KG GKVE+A +L+ ++ P+
Sbjct: 272 KG-----------------------------------GKVEEAVKLFSKMEEAGVAPNVV 296
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I L G+ EA +F E ERG P+L+TY+ L+ G+ + + +A + +
Sbjct: 297 TFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +KG PNV YN LI F + G+ + I I + M+ KG ++++ LI+G ++G
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVSDL--DSGAGALDELLVKN 526
+++ M + +V S+ ++ + S L DS + E+L++N
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 331 VIDLLCEEGKVEDAC----ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I++ C + K D C +++ L K P + ++ L + + + + FD
Sbjct: 194 LIEVYCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 252
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P + + T I C+ ++ EA +L+ M E GV PNV T+N +I G G
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
E E+M+++G P ++S+L++GL + G+ V+ T G
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 200/398 (50%), Gaps = 6/398 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I ++ D +L + P++ + T++R+ +G+ + A++ R
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMSVAPDVV----TYNTILRSLCDSGKLKEAMEVLDR 234
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + L+ A + + R K P+V T N+LI +CK+
Sbjct: 235 QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK-GCKPDVVTYNVLINGICKEG 293
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ L+ MP G PN++TH IL G +A+R+ D+L +G P T+
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + L A+ V+++M +G PN ++Y ++ FC+ KK A L+ M+ R
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GK + A E+ +L K C P +T+I L K GK A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E R G P ++TY+TL+ G+ ++ EA +++ DM ++P+ TYN ++ G
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
CK I L M++KGC P K ++++LIEG+ +
Sbjct: 534 LCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 177/346 (51%), Gaps = 7/346 (2%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
F NI ++ L + ++E ++ L+ M G +P+++ T+++ G+ G A R+
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ + G VPD TY VL+ GY K G + A++V++ M V P+ VTY ++ + C K
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGK 224
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA +LD +QR+ P +I+ C + V A +L + +K C PD +
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ +CKEG++ EA K + G P+++T+N ++ MC + +A RL DM+ KG
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
P+V T+N+LI C+ I +LE+M GC PN S++ L+ G +
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404
Query: 485 KVVSMATASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ + + + G + ++N LLT + D D+ L++L K C
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC 450
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 167/315 (53%), Gaps = 6/315 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P+V C LI+ C+ A R+++ + + G VP+++T+ ++GGY G+I+ A +
Sbjct: 139 IPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQ 198
Query: 242 VFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V L+R V PD TY ++ G+L +A++V+D P+ +TY ++IEA
Sbjct: 199 V----LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEAT 254
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C G+A LLD+M ++ P +I+ +C+EG++++A + + C P+
Sbjct: 255 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNV 314
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ +C G+ +A++L D +G PS++T+N LI +C L A + +
Sbjct: 315 ITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK 374
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G PN +YN L+ GFC+ I LE M+ +GC+P+ +++ L+ L + G
Sbjct: 375 MPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 434
Query: 480 EGEVGKVVSMATASG 494
++++ ++ G
Sbjct: 435 ADAAVEILNQLSSKG 449
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 189/356 (53%), Gaps = 3/356 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R E A+ FL + + SV LL A+ +RY+ V + F F + ++++
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETV-IYFSQQMELFGISHDLYSF 103
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
ILI C+ + A+ +L +M +G P++VT ++L G+ R I +A + ++
Sbjct: 104 TILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK 163
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAFCKGKKSG 307
G+ P+ Y L+D K G + A+++++EME G + + VTY ++ C +
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWR 223
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A +L DM +R+ P +ID ++G +++A EL+K++L+ + P+ +++I
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ LC G+++ AKK FD +G P+++TYNTLI G C+S + + +L+ M +G+
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV 343
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ FTYN LI G+C++G + I M+ G P+ + +L+ GL +G G
Sbjct: 344 GDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 195/382 (51%), Gaps = 3/382 (0%)
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
FD L E+ Q+ I + F V+ + ++ + F ++E + + S
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVD-FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L++ + R+ L L K P++ T L+ C+ + + A+ ++D M
Sbjct: 655 ILIHCFCRCSRFSLA-LALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+G+ PN+V + T++ G D+ NA +F + +G V DA TY L+ G GR TD
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A +++ +M ++PN + + +I+ F K EA+NL +M++R P+ +I+
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
C +G++ DA ++ ++ K C PD +T+I CK ++ + KLF E +G +
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
TYNTLI G C++ +L A ++++ MV+ GV P++ TYN+L+ C G ++ + ++
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
E++ + +++++I+G+
Sbjct: 954 EDLQKNQMDVDIITYNIIIQGM 975
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 210/421 (49%), Gaps = 5/421 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ ++ +A+ FD V L ++ +N I F +I + R LA+ ++
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKM-ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKM 676
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
K Q S+ +L +LLN Q R+ + V L+ +S + + PNV N +I LCK
Sbjct: 677 MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLV--DSMAELGLEPNVVIYNTVINGLCKNR 734
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A+ + M G+V + VT+ T++ G G +A R+ D++ R P+ +T
Sbjct: 735 DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFT 794
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+D ++K G L +A + EM V PN +TY +I FC + G+A+++ D M+ +
Sbjct: 795 ALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I C+ +VED +L+ + + + D +T+IH C+ GK+ A
Sbjct: 855 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVA 914
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+K+F+ + G P ++TYN L+ +C + ++ +A + +D+ + ++ ++ TYN++IQG
Sbjct: 915 QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQG 974
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
C+ KE + + KG + ++ +I GL +G E K+ + G + S
Sbjct: 975 MCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPS 1034
Query: 499 D 499
+
Sbjct: 1035 E 1035
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 189/383 (49%), Gaps = 5/383 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFKNS 175
F +I + R LA+ ++ K S+ + +LL+ ++N+ +D L+
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG-MVPNLVTHTTILGGYVWRG 234
+ ++ PNV N LI LCK DV A+ +L+EM G + +LVT+ T+L G + G
Sbjct: 163 KSGYE--PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSG 220
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+ A R+ D+ R PD T+T L+D ++K G L +A ++ +M + + PN VTY
Sbjct: 221 EWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I C + A+ D M + P+ +I+ C+ +VED +L++R+ R+
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEA 413
+ D +T+IH C+ GK+ AK +F G P ++T+ L+ G+C + E+ A
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
++DM + YN++I G CK +E + + +G P+ +++++I G
Sbjct: 401 MVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460
Query: 474 LYESGNEGEVGKVVSMATASGSV 496
L ++G E ++ G +
Sbjct: 461 LCKNGPRREADELFRRMKEDGII 483
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 210/446 (47%), Gaps = 11/446 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P + R+++ I + D+ + +FH SH+ ++ +IH R F
Sbjct: 610 RPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENL--GISHDLYSFTILIHCFCRCSRFS 667
Query: 96 AVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+LL ++ + P I +L + + R + AV + + ++ +V
Sbjct: 668 LALALLGKMMKLGFQPSIVTLGSL----LNGFCQGNRFQEAVSLVDSMAELGLEPNVVIY 723
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT++N L +N+ + +F K +V + T N LI LC A R+L +M
Sbjct: 724 NTVINGLCKNRDLNNALEIFYGMEKK-GIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ PN++ T ++ +V G++ AK ++ +++ R P+ TY L++G+ GRL
Sbjct: 783 KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLG 842
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
DA + D M G P+ VTY +I FCK K+ + L +M + V + +I
Sbjct: 843 DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLI 902
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP 392
C+ GK+ A +++ R++ PD + ++ LC GKI +A + ++ ++ +
Sbjct: 903 HGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMD 962
Query: 393 -SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
++TYN +I GMC + ++ EA L+ + KGV+ + Y +I G C+ G +E ++
Sbjct: 963 VDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYES 477
M + G P++ + + Y S
Sbjct: 1023 CTRMKEDGFMPSERIYDETLRDHYTS 1048
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 197/429 (45%), Gaps = 12/429 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHP-NFSHNYDTYHSIIHKLARARAF 94
+P P + RL++ I NL + +++ + SH+ ++ +IH R
Sbjct: 60 QPLPSVVDFTRLLTAI---ANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRL 116
Query: 95 DAVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
S+L +L +P I F +++ + L R A + K + +V
Sbjct: 117 SLALSILGKMMKLGYDPSIV----TFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVV 172
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
NTL++ L +N ++ + K ++ ++ T N L+ LC + A R+L +M
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM 232
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ P++ T T ++ +V +G+++ A+ ++ +L P+ TY L++G GRL
Sbjct: 233 TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRL 292
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A K D M G PN VTY +I FCK ++ + L M + V + +
Sbjct: 293 YHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTL 352
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-S 390
I C+ GK+ A +++ ++ PD ++H LC G+I A F++ G
Sbjct: 353 IHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEK 412
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
++ YN +I G+C++ ++ EA L+ + +GV+P+ TY ++I G CK G +E
Sbjct: 413 YLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 472
Query: 451 ILEEMLDKG 459
+ M + G
Sbjct: 473 LFRRMKEDG 481
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 157/311 (50%), Gaps = 5/311 (1%)
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K DD G + EM +P++V T +L + +F + + G D
Sbjct: 595 KFDDAFG---LFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLY 651
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
++T+L+ + + R + A+ ++ +M G +P+ VT G ++ FC+G + EA +L+D M
Sbjct: 652 SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P+ + VI+ LC+ + +A E++ + +K + D +T+I LC G+
Sbjct: 712 AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771
Query: 377 WEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +L D +R P+++ + LI + L EA L+ +M+ + V PN+ TYN L
Sbjct: 772 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I GFC G + + + M+ KGCFP+ +++ LI G +S + K+ T G
Sbjct: 832 INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891
Query: 496 V-ESDSWNFLL 505
V ++ ++N L+
Sbjct: 892 VGDAFTYNTLI 902
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G++ E+A +F +++ +P +T L+ L R + +ME G+
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ ++ ++I FC+ + A ++L M++ Y PS ++ C ++ DA L
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPS-LLTYNTLIAGMCE 406
+++ P+ + +T+I LCK G + A +L +E E+ G + + L+TYNTL+ G+C
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
S E +A R+ DM ++ + P+VFT+ LI F K GN E + ++ML PN +
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASG 494
++ LI GL G K + + G
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKG 306
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
+ EDA +L+ +++ +P + ++ + + + E I L ++
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
LI C + L+ A + M++ G +P++ T+ L+ GFC + ++ M+
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLT 506
G PN ++ LI+ L ++G+ ++++ G + +D ++N LLT
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 195/396 (49%), Gaps = 48/396 (12%)
Query: 121 IRNYGLAGRPELAVKTFLR------IEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+R YG++ PE R IE F ++V S N LL AL R +F
Sbjct: 223 LRQYGISPSPEACNAVLSRLPLDEAIELFQELPHKNVCSYNILLKALCDAGRVKDARQLF 282
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT---------- 222
+ P+V T ILI C ++E A+++LDEM + G+ PN
Sbjct: 283 D----EMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCD 338
Query: 223 -------------------------HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+TT+L G+ +GD+ +A+R F ++ +G D T
Sbjct: 339 KGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVT 398
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT +++G + L +A K++ EM ++ +EVTY V+I+ +CK K EA + + M+
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR P+ + D LC++G V+ A EL + K + +++I+ LCK G +
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A + + + + P + TY TLI +C+S +L A L +M++KG++P + TYN+L+
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
GFC G + G ++L+ ML+K PN +++ L++
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMK 614
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 4/341 (1%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T +I LC+ ++E A ++L EM + + + VT+T ++ GY RG + A ++ +
Sbjct: 398 TYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAM 457
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG P+ TYT L DG K G + A +++ EM + G+E N TY +I CK
Sbjct: 458 VQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 517
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A + DM P +ID LC+ G ++ A L + +L K P + +
Sbjct: 518 EQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVL 577
Query: 367 IHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
++ C G++ KKL D E+ P+ TYN+L+ C + ++ M + V
Sbjct: 578 MNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDV 637
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
PN TYN+LI+G CK N KE + +EM+ KG TS+S LI L + E +
Sbjct: 638 GPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARE 697
Query: 486 VVSMATASG-SVESDSWNFL--LTRIVSDLDSGAGALDELL 523
+ G + ESD ++F L +L+S DEL+
Sbjct: 698 LFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y +L+ GR+ DA ++ DEM P+ VTYG++I C + A LLD+M
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEM 317
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P++ + V+ LLC++G + DA + + ++++ + D A+ +T++ C +G +
Sbjct: 318 VAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A++ FDE +R G +TY T+I G+C + EL EA +L +M + ++ + TY +L
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I G+CK G E ++ M+ +G PN +++ L +GL + G+
Sbjct: 438 IDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGD 481
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 167/379 (44%), Gaps = 38/379 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I+ L RA + E LL E+ + E + +I Y G+
Sbjct: 398 TYTTMINGLCRAVELEEAEKLLQEMWAR-RLDVDEVTYTVLIDGYCKRGK---------M 447
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
E F + NA+VQ V PNV T L LCK+
Sbjct: 448 AEAFQMH----------NAMVQRG-----------------VTPNVVTYTALTDGLCKQG 480
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
DV+ A +L EM + G+ N T+ +++ G G +E A R D+ PD TYT
Sbjct: 481 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYT 540
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+D K G L A ++ EM D G++P VTY V++ FC + + LLD ML++
Sbjct: 541 TLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEK 600
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P++A ++ C E ++ E++K + ++ P+ + +I CK + EA
Sbjct: 601 NIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEA 660
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
DE ++G + +Y+ LI + + + EA L+ DM ++G+ Y+ I
Sbjct: 661 LYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL 720
Query: 439 FCKIGNAKEGIRILEEMLD 457
N + + + +E+++
Sbjct: 721 NFNEDNLESTLALCDELVE 739
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+T LI ALCK D++ A +L EM G+ P +VT+ ++ G+ G +E K++
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKL 593
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L++ P+A TY LM Y + ++ M V PNE TY ++I+ CK
Sbjct: 594 LDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCK 653
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA D+M+Q+ + ++ +I LL ++ K +A EL+ + ++ ++ +
Sbjct: 654 ARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDV 713
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
I E + L DE SI
Sbjct: 714 YDFYIDLNFNEDNLESTLALCDELVEASI 742
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 110/214 (51%), Gaps = 8/214 (3%)
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L +A+++ E+ V +Y ++++A C + +AR L D+M V + +
Sbjct: 244 LDEAIELFQELPHKNV----CSYNILLKALCDAGRVKDARQLFDEMASAPDVVTYGI--- 296
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
+I C G++E+A +L ++ P+ + ++++ LC +G I +A ++ ++ +R
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
I Y T+++G C +L A R +D+M KG+ + TY +I G C+ +E
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
++L+EM + ++ ++++LI+G + G E
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEA 450
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 225/464 (48%), Gaps = 33/464 (7%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNF-SHNYDTYHSIIHKLARARAF-------- 94
P L ++I + + AL F K +PN + Y ++IH L A+ +
Sbjct: 27 PSDLTTIILHSKTPEQALDTFTSVLKQNPNNPTKKLHLYSAVIHYLTGAKVYPTARCLTK 86
Query: 95 DAVESLLTE-------------LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
D +++LL L Q K ++F +I + G + A++ +L++
Sbjct: 87 DLIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKVG 146
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
F +V++ N LLN L++ +D++ ++ N + ++ P V T N+L+ A C++ DV
Sbjct: 147 AFP---AVQACNALLNGLLKKSSFDIMWELYNNMVSR-RLFPTVVTYNVLVDACCRQGDV 202
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
A ++ EM G+ P +V +TT++ G + A+ +F + D G P+ TY VL
Sbjct: 203 LRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVL 262
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
MDGY K + A+ + M D+G++PN VT+G++I+A CK ++ AR M +
Sbjct: 263 MDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGV 322
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
VP+ + +ID + G +A +L + + PD S +I C+ G + EA
Sbjct: 323 VPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADD 382
Query: 382 LFDEFERGSIPS-LLTYNTLIAGMC------ESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ E+ +P+ + YN+LI G C ++ E+ +A + + DM G+ P+ Y +
Sbjct: 383 ILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAV 442
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++QG + + + + +M+ G PN+ + ++ G ++G
Sbjct: 443 MLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNG 486
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 4/235 (1%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG + + + VL+ + ++G + +A++V ++ G P ++ K
Sbjct: 113 RGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKV---GAFPAVQACNALLNGLLKKSSFDI 169
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
L ++M+ R+ P+ ++D C +G V A L +++K P I +T+IH
Sbjct: 170 MWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIH 229
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC E K+ EA+ +F + + G P+L TYN L+ G C++A + +A L+ M++ G++P
Sbjct: 230 GLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQP 289
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
NV T+ +LI CK+ R +M G PN F+ LI+G ++GN E
Sbjct: 290 NVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSE 344
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ A RV+ L G P L++G +K ++ + M + P VTY
Sbjct: 133 GLVDEALRVY---LKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTY 189
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
V+++A C+ A++L+ +M+++ P+ + +I LC E K+ +A +++++
Sbjct: 190 NVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKD 249
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTE 412
P+ + ++ CK + +A L+ + G P+++T+ LI +C+ EL
Sbjct: 250 SGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLA 309
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A R + M + GV PNV +N LI G+ K GN E +L EM P+ ++S+LI+
Sbjct: 310 ARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIK 369
Query: 473 GLYESGNEGEVGKVVSMATASG 494
G E ++ G
Sbjct: 370 NACRLGTVEEADDILKRMEKEG 391
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 195/378 (51%), Gaps = 4/378 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G + AV+ R++ V+ +V +T+++++ ++K + ++ K
Sbjct: 168 TLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK 227
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
++ P+V T + LI C ++ A+ + + M S + PN+ T + ++ G+ G +
Sbjct: 228 -RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVRE 286
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK V ++ + D TY LMDGY + ++ A + + M GV P+ +Y +MI
Sbjct: 287 AKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMIN 346
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK K EA L ++M ++ P+ ++D LC+ G+ A EL + + P
Sbjct: 347 GFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG-QP 405
Query: 359 DNAIS-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
N I+ ++I+ +CK + +A L + E+G P + TY LI G+C+ L +A ++
Sbjct: 406 SNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKV 465
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
++D++ KG PN++TY LI GFC G EG+ +L +M D GC PN ++ +LI L+E
Sbjct: 466 FEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFE 525
Query: 477 SGNEGEVGKVVSMATASG 494
+ K++ A G
Sbjct: 526 KDENDKAEKLLREMIARG 543
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 176/325 (54%), Gaps = 2/325 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L +L++ K+Y L + P+ TCN+L+ + ++ + V ++
Sbjct: 64 ILGSLLKAKQYQ-TALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKK 122
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P+ VT T ++ G +G++ A ++ +G+ D +Y L++G ++G A
Sbjct: 123 GYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAA 182
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V+++ ++ V PN V Y +I++ CK K +A +L +M+ ++ P +I
Sbjct: 183 VQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISG 242
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-S 393
C GK++ A +L+ R++ N P+ S +I CKEGK+ EAK + + ++
Sbjct: 243 FCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLD 302
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN+L+ G C ++ +A L++ M ++GV P+V++Y+++I GFCKI E +++ E
Sbjct: 303 VVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFE 362
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESG 478
EM K FPN +++ L++GL +SG
Sbjct: 363 EMHCKQIFPNVVTYNSLVDGLCKSG 387
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 36/279 (12%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV+T +ILI CK+ V A VL M + ++VT+ +++ GY + AK +
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F + RG PD +Y+++++G+ K+ + +A+K+ +EM + PN VTY +++ CK
Sbjct: 326 FNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCK 385
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ A L+D+M R + ++D +C+ V+ A L ++ K PD
Sbjct: 386 SGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT 445
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF------------------------------------ 386
+ +I+ LCK G++ +A+K+F++
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ G IP+ +TY LI + E E +A +L +M+ +G+
Sbjct: 506 DNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I + G+ A + K NV+ V + N+L++ K+ + +F N
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF-NVM 329
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ V P+V++ +I+I CK V+ A+++ +EM + PN+VT+ +++ G G
Sbjct: 330 AQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRT 389
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A + ++ DRG + TY ++D K + A+ ++ ++++ G++P+ TY V+
Sbjct: 390 SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVL 449
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I CK + +A+ + +D+L + Y P+ +I+ C +G ++ + ++ C
Sbjct: 450 INGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGC 509
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+P+ +IH L ++ + +A+KL E
Sbjct: 510 IPNAITYEILIHSLFEKDENDKAEKLLRE 538
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 4/283 (1%)
Query: 73 NFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
N + N T+ +I + + +A L +K+N +K + +++ Y L +
Sbjct: 263 NINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN--VKLDVVTYNSLMDGYCLVKQVN 320
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A F + + V V S + ++N + K D +F+ H ++ PNV T N L
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFE-EMHCKQIFPNVVTYNSL 379
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ LCK A+ ++DEM G N++T+ +IL ++ A + I ++G
Sbjct: 380 VDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TYTVL++G K+GRL DA KV +++ G PN TY +I FC E
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+L M +P++ +I L E+ + + A +L + ++ +
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
IP + + ++ + ++ + A L M G++P+ T N+L+ F ++G+ K
Sbjct: 55 IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ ++L KG P+ +F++LI+GL G
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKG 142
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 239/489 (48%), Gaps = 14/489 (2%)
Query: 14 CLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN 73
L +S+ A +LS + V P + P L P L++ + +L+++
Sbjct: 396 ALFKSVLSADKALSPLAVLPHLDGAPSSL-PNLLLTASAAVRPHATSLRLYSRMKSLSLP 454
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
S + H ++ L A AF A+ + + L+ + F ++R+ AG+P A
Sbjct: 455 ISTA--SLHPLLSALPSAPAF-ALFADMFRLR----LPLCTTTFNIMLRHLCSAGKPARA 507
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ ++ + N + NT++ R + + R + + PN +T +I
Sbjct: 508 LELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 563
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK V+ A++V DEM + G V P V + ++GGY +G ++ A +++RG
Sbjct: 564 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 623
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
TY +L+ GR T+A ++++EM G+ P+ TY ++I CK +A +
Sbjct: 624 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 683
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++M +R + +I L ++G+V++ +L+ +R+ PD + + +I+
Sbjct: 684 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 743
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G I A ++ E E+ I P +TYNTL+ G+C + EA +L D+M E+G++P++ T
Sbjct: 744 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 803
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN LI G+ G+ K+ +RI EM++KG P +++ LI+GL ++G + +V
Sbjct: 804 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 863
Query: 492 ASGSVESDS 500
+G DS
Sbjct: 864 ENGITPDDS 872
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 172/371 (46%), Gaps = 20/371 (5%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q LD+ ++ G + N TY ++I + D + E+ E+K
Sbjct: 536 QAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 590
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVH 169
++ +I Y G+ + A+ R+ + V +V + N L++AL + R Y+LV
Sbjct: 591 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 650
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
M + P+VFT NILI CK+ +V+ A+ + + M G+ +VT+T ++
Sbjct: 651 EMGGKG-----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 705
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
+G ++ ++F + + RG PD Y L++ + G + A ++M EME + P+
Sbjct: 706 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 765
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+VTY ++ C + EAR L+D+M +R P +I +G V+DA +
Sbjct: 766 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 825
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
++ K P + +I LCK G+ +A+ + E E G P TY +LI G+
Sbjct: 826 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT--- 882
Query: 409 ELTEAGRLWDD 419
TE R DD
Sbjct: 883 --TEDERAIDD 891
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 220/435 (50%), Gaps = 14/435 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I L + R DA + L+ E+ + I ++ I G E A F
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHG-INIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++ +L+ + K Y+L+ M K + +V + +T ++K +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN-----IVISPYTYGTVVKGM 427
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C D++GA ++ EM + G PN+V +TT++ ++ +A RV ++ ++G PD
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+ G K R+ +A + EM +NG++PN TYG I + + + A + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + +P+ LC +I+ C++GKV +AC ++ ++ + + D + +++ L K K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A+++F E +G P + +Y LI G + + +A ++D+MVE+G+ PNV YNM
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ GFC+ G ++ +L+EM KG PN ++ +I+G +SG+ E ++ G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 495 SVESDSWNFLLTRIV 509
V +F+ T +V
Sbjct: 728 LVPD---SFVYTTLV 739
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 205/430 (47%), Gaps = 13/430 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N Y ++I + F +L E+K+ P+I C +L I + + A R + A
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK----AKRMDEA 506
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + ++ + + ++ ++ + K R + V+PN C LI
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLIN 565
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CKK V A M G++ + T+T ++ G +++A+ +F ++ +G P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D +Y VL++G+ KLG + A + DEM + G+ PN + Y +++ FC+ + +A+ LL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M + P++ C +ID C+ G + +A L+ + K +PD+ + +T++ C+
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE--SAEL-TEA-GRLWDDMVEKGVEPNV 429
+ A +F ++G S +N LI + + EL TE RL D ++ +PN
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN++I CK GN + + +M + P +++ L+ G + G E+ V
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 490 ATASGSVESD 499
A A+G +E D
Sbjct: 866 AIAAG-IEPD 874
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 199/423 (47%), Gaps = 10/423 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S+I L++A+ D S L E+ +N +K + I Y A A K +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V + L+N + + +++ + ++ + T +L+ L K D
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDK 607
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A + EM G+ P++ ++ ++ G+ G+++ A +F ++++ G P+ Y +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ + G + A +++DEM G+ PN VTY +I+ +CK EA L D+M +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP S + ++D C VE A ++ +K C A + +I+W+ K GK E K
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKT-ELK 785
Query: 381 -----KLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+L D F+R P+ +TYN +I +C+ L A L+ M + P V TY
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ G+ K+G E + +E + G P+ +S++I + G + +V A
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 495 SVE 497
+V+
Sbjct: 906 AVD 908
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 56/444 (12%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENLFITVIRNYGLAGRPEL 132
N TY + I A F + + + E+++ CG + L +I Y G+
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRE-----CGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + + + ++ L+N L +N + D +F+ R K + P+VF+ +LI
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLI 634
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K +++ A + DEM G+ PN++ + +LGG+ G+IE AK + ++ +G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+A TY ++DGY K G L +A ++ DEM+ G+ P+ Y +++ C+ A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC----MPDNAISSTIIH 368
++ S+A +I+ + + GK E E+ RL+ + P++ + +I
Sbjct: 755 FGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+LCKEG + AK+LF + + ++ P+++TY +L+ G + E ++D+ + G+EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 428 NVFTYNMLI----------------------------------------QGFCKIGNAKE 447
+ Y+++I GF K+G +
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+++E M+ P+ + LI
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELI 957
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF + Y G E AV F + + LL+AL++ R DL ++K
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 176 RHKFKVVPNVFTCNILIKALCK-------KD--------------DVEGAIRVLDEMPSM 214
+ VV +V T ++LI A C+ KD +V+GA+++ + M
Sbjct: 213 VER-NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+VP T+ ++ G +E+AK + ++ G D TY++L+DG +K GR DA
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA 330
Query: 275 VK------------------------------------VMDEMEDNGVEPNEVTYGVMIE 298
K + D M +G+ P Y +IE
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C+ K + LL +M +R V S V+ +C G ++ A + K ++ C P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ I +T+I + + +A ++ E E+G P + YN+LI G+ ++ + EA
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+MVE G++PN FTY I G+ + + ++EM + G PNK + LI
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T NI+I LCK+ ++E A + +M + ++P ++T+T++L GY G V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-----EDNGVEPNEVTYGVMI 297
F + + G PD Y+V+++ ++K G T A+ ++D+M D+G + + T ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
F K + A ++++M++ +Y+P SA ++I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN VT+ ++ G++E AK +F + + +P TYT L++GY K+GR + V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP-----SSALCCKVI 332
DE G+EP+ + Y V+I AF K + +A L+D M + V S + C ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ G++E A ++ + ++R +PD+A +I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 228/485 (47%), Gaps = 17/485 (3%)
Query: 4 HLHQKITAPSCL---LQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLA 60
H+ Q ++ S + LQ++ + ++ T P+ + L P ++ +I Q+N A
Sbjct: 71 HIAQLLSTASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPXLVIQVIKSQKNPYHA 130
Query: 61 LQIFHYAGKFHPN---FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
L F++A +PN +SH++ Y +I L F SLL + + +
Sbjct: 131 LFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAK--- 187
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
++ YG G A+ F R +K R + S N +L V+ R L +F
Sbjct: 188 --FVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVK 245
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V P+V T +I+ CK +E A V DE MG PNLVT+ T++ G+ +G +E
Sbjct: 246 EGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE---MGCKPNLVTYNTMINGFCKKGLME 302
Query: 238 NAKRVFGDILD-RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A ++ + + +PD TYT L+DGY K G L +A+K M+EM EPN +TY +
Sbjct: 303 SAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAI 362
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I C EA+ ++ M + A ++ LC GK++DA K ++
Sbjct: 363 IYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGM 422
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGR 415
D +++ CK GK +A L E + RG PS+ ++N + + ES + +AG
Sbjct: 423 EADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGL 482
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKI-GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ M + G PN +Y+ +I G CK G E +++M G + + +S L++G
Sbjct: 483 ILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGY 542
Query: 475 YESGN 479
E GN
Sbjct: 543 CEDGN 547
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 11/341 (3%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
F +KA + D+ GAI M L ++ ILG +V I A+ VF
Sbjct: 183 FAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQ 242
Query: 246 ILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
I+ G V PD +TYT ++ GY K+G + +A V DEM G +PN VTY MI FCK
Sbjct: 243 IVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKG 299
Query: 305 KSGEARNLLDDMLQRK-YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
A ++D M + + +P + +ID C+ G++E+A + + ++ +NC P+
Sbjct: 300 LMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTY 359
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ II+ LC G + EAK++ G ++ T+ +++ G+C +L +A R +MV
Sbjct: 360 NAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVG 419
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G+E + Y +++ +CKIG A + I +L+EM +G P+ +SF+ + L ESG +
Sbjct: 420 LGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDK 479
Query: 483 VGKVVSMATASGSVESDSWNFL-LTRIVSDLDSGAGALDEL 522
G ++ G NFL + ++ L G + E+
Sbjct: 480 AGLILRQMKQLGCTP----NFLSYSTVIDGLCKAKGRMHEV 516
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 113/248 (45%), Gaps = 3/248 (1%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N N TY++II+ L D + ++T ++ N +K ++++ + G+ +
Sbjct: 351 NCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNG-LKDNVATHTSILKGLCVVGKLDD 409
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + + ++ ++ ++N + + D + K + + + P+V + N +
Sbjct: 410 AARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSR-GINPSVSSFNAVF 468
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV-WRGDIENAKRVFGDILDRGW 251
+ L + + A +L +M +G PN ++++T++ G +G + + D+ G
Sbjct: 469 RILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGH 528
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
DA+ Y+ L+ GY + G A+++ EM D G N ++ ++ +K+ E
Sbjct: 529 HLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEK 588
Query: 312 LLDDMLQR 319
++M +R
Sbjct: 589 FFEEMSRR 596
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F + K S+ N LL+A+V+ K+YD+V + + +++T NI+I
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVV-ISLGKKMEVLGIRNDLYTFNIVI 127
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C V A+ VL +M +G P+ VT +++ G+ R + +A + +++ G+
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y ++D K R+ DA+ E+ G+ PN VTY ++ C + +A L
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L DM++RK P+ ++D + GKV +A E+++ ++R + PD S++I+ LC
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 373 EGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+I EA ++FD +G P +++YNTLI G C++ + + +L+ M ++G+ N T
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
YN LIQGF ++G+ + +M G P+ ++++L+ GL ++G
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNG 414
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 177/327 (54%), Gaps = 2/327 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K + P++ N L+ A+ K + I + +M +G+ +L T ++ + +
Sbjct: 78 KTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVS 137
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A V G +L G+ PD T L++G+ + R++DAV ++D+M + G P+ V Y +I
Sbjct: 138 LALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAII 197
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
++ CK ++ +A + ++ ++ P+ +++ LC G+ DA L + ++++
Sbjct: 198 DSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKIT 257
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRL 416
P+ S ++ K GK+ EAK++F+E R SI P ++TY++LI G+C + EA ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+D MV KG P+V +YN LI GFCK ++G+++ +M +G N +++ LI+G ++
Sbjct: 318 FDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQ 377
Query: 477 SGNEGEVGKVVSMATASGSVESDSWNF 503
G+ + + S + G V D W +
Sbjct: 378 VGDVDKAQEFFSQMDSFG-VSPDIWTY 403
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 228/458 (49%), Gaps = 7/458 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+RL R L A+ +F K P F D ++ ++ + + + +D V SL ++
Sbjct: 54 ERLSKTRLRDIKLHDAINLFREMVKTRP-FPSIVD-FNRLLSAIVKMKKYDVVISLGKKM 111
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ I+ F VI + + LA+ ++ K + ++ +L+N + R
Sbjct: 112 -EVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 165 Y-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D V L+ K ++ P++ N +I +LCK V A+ E+ G+ PN+VT+
Sbjct: 171 VSDAVSLVDKMVEIGYR--PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTY 228
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T ++ G G +A R+ D++ R P+ TY+ L+D ++K G++ +A ++ +EM
Sbjct: 229 TALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR 288
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
++P+ VTY +I C + EA + D M+ + P +I+ C+ +VED
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVED 348
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
+L++++ ++ + + +T+I + G + +A++ F + + G P + TYN L+
Sbjct: 349 GMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLG 408
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ L +A +++DM + ++ ++ TY +IQG CK G ++ + + KG P
Sbjct: 409 GLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKP 468
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+ +++ ++ GL G + EV + + G +++DS
Sbjct: 469 DIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDS 506
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 205/441 (46%), Gaps = 17/441 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARA 93
+P+P + RL+S I + + D+ + + GK D T++ +I+
Sbjct: 80 RPFPSIVDFNRLLSAIVKMKKYDVVISL----GKKMEVLGIRNDLYTFNIVINCFCCCFQ 135
Query: 94 FDAVESLL---TELKQNPE-IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
S+L +L P+ + G +++ + R AV ++ + + +
Sbjct: 136 VSLALSVLGKMLKLGYEPDRVTIG-----SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDI 190
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ N ++++L + +R + FK K + PNV T L+ LC A R+L
Sbjct: 191 VAYNAIIDSLCKTRRVNDALDFFKEIGRK-GIRPNVVTYTALVNGLCNSGRWNDAARLLR 249
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + PN++T++ +L +V G + AK +F +++ PD TY+ L++G
Sbjct: 250 DMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R+ +A ++ D M G P+ V+Y +I FCK K+ + L M QR V ++
Sbjct: 310 RIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYN 369
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+I + G V+ A E + ++ PD + ++ LC G + +A +F++ ++
Sbjct: 370 TLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKS 429
Query: 390 SIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ ++TY T+I GMC++ ++ +A L+ + KG++P++ TY ++ G C G E
Sbjct: 430 EMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEV 489
Query: 449 IRILEEMLDKGCFPNKTSFSL 469
+ +M +G N + L
Sbjct: 490 EALYTKMKQEGLMKNDSMLCL 510
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 218/450 (48%), Gaps = 22/450 (4%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPE------------IKCGEN------LFITVIR 122
Y ++H LA +R F L EL + + I C E+ +F +++
Sbjct: 137 YCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVK 196
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
Y GR +++F R+ + +V + N LLN L++ D +++ +F +
Sbjct: 197 AYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYE-EMERFGIA 255
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN++T NIL LCK D + L++M G P++VT+ T++ Y +G +++A +
Sbjct: 256 PNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYL 315
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ + RG VPD +YT LM+G K GR+ +A ++ M G+ P+ VTY +I +CK
Sbjct: 316 YKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCK 375
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K E+R+LL DM+ P S C +++ +EGK A L L R I
Sbjct: 376 EGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDI 435
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC+E + + AK L + + G P L YN LI C+ + EA L +MV
Sbjct: 436 YSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMV 495
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+K ++PN+ TY +I ++ + EG ++ EM+ G P+ L G +
Sbjct: 496 DKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDID 555
Query: 482 EVGKVVSMATASGSV-ESDSWNFLLTRIVS 510
+ ++S + +++S+N L+ RI S
Sbjct: 556 KAESLLSFFAKEFQIHDTESFNALI-RITS 584
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 163/399 (40%), Gaps = 46/399 (11%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ + + D +++ +F + N T++ + H L + V
Sbjct: 221 PTVITSNYLLNGLLKLNYTDRCWEVYEEMERF--GIAPNLYTFNILTHVLCKDGDTGKVN 278
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
L ++++ +P+I + T+I +Y GR + A + + + V + S L
Sbjct: 279 KFLEKMEEEGFDPDIVT----YNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTAL 334
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+N L + R H +F H+ + P++ T N LI CK+ ++ + +L +M G
Sbjct: 335 MNGLCKEGRVREAHQLFHRMVHR-GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 393
Query: 216 MVPNLVTHTTILGGYVWRG---------------------DI----------ENAKRVFG 244
+ P+ T ++ GY G DI EN
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAK 453
Query: 245 DILDR----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++L+R G P+ Y L+ + + + +A+ + EM D ++PN TY +I
Sbjct: 454 NLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCL 513
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ +S E +L+ +M+ +P +C + C E ++ A L ++ + D
Sbjct: 514 SRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDT 573
Query: 361 AISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYN 398
+ +I +G I + ++ D + G +P+ LT N
Sbjct: 574 ESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCN 612
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 226/446 (50%), Gaps = 14/446 (3%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+R++S NL + F +A K P + H+Y+ Y ++I L + R F AV +L+ E
Sbjct: 133 PERVLSRCGDAGNL--GYRFFVWASK-QPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEE 189
Query: 104 L-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ K+NP + E +FI ++R + + AV+ + K+ + LL+AL +N
Sbjct: 190 MRKENPYMLTPE-VFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN 248
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+F++ R +F PN+ L+ C++ + A VL ++ G P++V
Sbjct: 249 GSVKEAASLFEDMRVRFN--PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVV 306
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ +LGGY G + +A + ++ P+A ++T+L+ + K ++ +A+++ EM+
Sbjct: 307 YNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQ 366
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS--SALCCKVIDLLCEEGK 340
+G E + VTY +I FCK + +A +LDDM+Q+ + PS S LC + EE
Sbjct: 367 GSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEE-- 424
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNT 399
+E+ EL + + + C+PD I +T+I +CK G + EA +L+ E + G + P L TY
Sbjct: 425 LEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYIL 484
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGV--EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
++ G L EA + +MVE+G+ P T L + + + M
Sbjct: 485 MVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 544
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEV 483
KGC N +++++ I L+ +G+ E
Sbjct: 545 KGCELNVSAWTIWIHALFSNGHVKEA 570
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 161/352 (45%), Gaps = 41/352 (11%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK--FKVVPNVFTCNILIKALCKKDDVEG 203
+ S ++ L + +++ V + + R + + + P VF +L++ V+
Sbjct: 161 RHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI--VLMRRFASVRMVKK 218
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A+ VLDEMP G P+ +L G ++ A +F D+ R + P+ +T L+
Sbjct: 219 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLY 277
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ + G++ +A V+ ++++ G EP+ V Y ++ + +
Sbjct: 278 GWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQA-------------------- 317
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
GK+ DA +L + + NC P+ A + +I CK K+ EA ++F
Sbjct: 318 ---------------GKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIF 362
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
E + G ++TY TLI+G C+ +A + DDM++KG +P+ +Y ++ K
Sbjct: 363 TEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKK 422
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+E + ++EEM GC P+ ++ +I + + G+ E ++ A G
Sbjct: 423 EELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 474
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 188/359 (52%), Gaps = 2/359 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF T I + G+ E AVK F ++E+ V +V + NT+++ L RYD MFK
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA-FMFKEK 333
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + P + T +IL+K L + + A VL EM G PN++ + ++ ++ G
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + ++ +G ++TY L+ GY K G+ +A +++ EM G N+ ++
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I C A + +ML R P L +I LC+ GK A ELW + L K
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ D S+ ++H LC+ GK+ EA ++ E RG + ++YNTLI+G C +L EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+MV++G++P+ +TY++LI G + +E I+ ++ G P+ ++S++I+G
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 181/356 (50%), Gaps = 6/356 (1%)
Query: 152 LNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
L TL++ L ++ ++ + L F+ F V + T N L+ LC+ ++ A R+ E
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTRTSNALLHGLCEAGKLDEAFRIQKE 543
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ G V + V++ T++ G + ++ A +++ RG PD TY++L+ G + +
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A++ D+ + NG+ P+ TY VMI+ CK +++ E + D+M+ + P++ +
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 663
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+I C G++ A EL + + K P++A +++I + ++ EAK LF+E G
Sbjct: 664 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 723
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ Y LI G + ++ + L +M K V PN TY ++I G+ + GN E
Sbjct: 724 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 783
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
R+L EM +KG P+ ++ I G + G E K + +E WN L+
Sbjct: 784 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIE--GWNKLI 837
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 185/412 (44%), Gaps = 14/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++ L RA+ +L E+ + P + NL + I L + +K
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL--NKAIEIKD 402
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKAL 195
+ + ++ S + NTL+ +N + D + K F V FT I + L
Sbjct: 403 LMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL--L 458
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C + A+R + EM M P TT++ G G A ++ L++G+V D
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T L+ G + G+L +A ++ E+ G + V+Y +I C KK EA LD+
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++R P + +I L KVE+A + W R +PD S +I CK +
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
E ++ FDE ++ P+ + YN LI C S L+ A L +DM KG+ PN TY
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
LI+G I +E + EEM +G PN ++ LI+G G G++ KV
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY---GKLGQMVKV 747
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 166/347 (47%), Gaps = 5/347 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ TCNIL+ +L + ++ + D + G+ P++ TT + + G +E A
Sbjct: 235 MFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAV 293
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F + + G P+ T+ ++DG GR +A ++M + G+EP +TY ++++
Sbjct: 294 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 353
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K+ G+A +L +M ++ + P+ + +ID E G + A E+ ++ K +
Sbjct: 354 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 413
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +T+I CK G+ A++L E G + ++ ++I +C A R +
Sbjct: 414 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ + + P LI G CK G + + + + L+KG + + + L+ GL E+G
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 480 EGEVGKVVSMATASGSV-ESDSWNFLLTRIVS--DLDSGAGALDELL 523
E ++ G V + S+N L++ LD LDE++
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF + ++G P TT +L+ ++ + D + GV P+ + I AFC
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFC 284
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
KG GKVE+A +L+ ++ P+
Sbjct: 285 KG-----------------------------------GKVEEAVKLFSKMEEAGVAPNVV 309
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I L G+ EA +F E ERG P+L+TY+ L+ G+ + + +A + +
Sbjct: 310 TFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 368
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +KG PNV YN LI F + G+ + I I + M+ KG ++++ LI+G ++G
Sbjct: 369 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 428
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVSDL--DSGAGALDELLVKN 526
+++ M + +V S+ ++ + S L DS + E+L++N
Sbjct: 429 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 331 VIDLLCEEGKVEDAC----ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I++ C + K D C +++ L K P + ++ L + + + + FD
Sbjct: 207 LIEVYCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 265
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P + + T I C+ ++ EA +L+ M E GV PNV T+N +I G G
Sbjct: 266 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
E E+M+++G P ++S+L++GL + G+ V+ T G
Sbjct: 326 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 373
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 165/297 (55%), Gaps = 1/297 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PNV+T NILI+ALC + + A+ +L +M G PN+VT+ T++ + G+++ A+
Sbjct: 146 VAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 205
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R+ G +LD G P+ T+ +++G K G++ DA KV DEM G+ P+ V+Y ++ +
Sbjct: 206 RLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGY 265
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK S EA ++ +M Q+ +P +I ++C+ G +E A L +++ + +
Sbjct: 266 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE 325
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I CK+G + +A + I PS++ YN LI G C + EA L +
Sbjct: 326 VTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 385
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
M KG++P+V TY+ +I +CK + + ++ML+KG P+ ++S LI L E
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCE 442
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 45/365 (12%)
Query: 148 SVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
+V + NTL+ A + D LV +M + PN+ T N ++ +CK +E
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG-----LKPNLVTFNSMVNGMCKAGKMED 238
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT---- 259
A +V DEM G+ P+ V++ T++GGY G A VF ++ +G +PD T+T
Sbjct: 239 ARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIH 298
Query: 260 -------------------------------VLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
L+DG+ K G L DA+ + M ++P
Sbjct: 299 VMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKP 358
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V Y +I +C + EAR LL +M + P +I C+ A EL
Sbjct: 359 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 418
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
+++L K +PD S++I LC+E ++ +A LF + G P TY +LI G C+
Sbjct: 419 QQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 478
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ A L D MV+ GV P+V TY++LI G K A E ++L ++ + P T +
Sbjct: 479 GNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKY 538
Query: 468 SLLIE 472
L+
Sbjct: 539 DALMH 543
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 191/427 (44%), Gaps = 59/427 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y++++ +A S+ E+ Q P++ F ++I AG E AV
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT----FTSLIHVMCKAGNLEWAVTL 312
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + +Q + + L++ + D L + R + ++ P+V N LI C
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR-QCRIKPSVVCYNALINGYC 371
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ A +L EM + G+ P++VT++TI+ Y D +A + +L++G +PDA
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 431
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY+ L+ + RL+DA + M G++P+E TY +I+ CK
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK-------------- 477
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
EG VE A L ++++ +PD S +I+ L K +
Sbjct: 478 ---------------------EGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 516
Query: 377 WEAKK-LFDEFERGSIPSLLTYN---------------TLIAGMCESAELTEAGRLWDDM 420
EA++ LF + IP+ Y+ L+ G C + EA +++ M
Sbjct: 517 MEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM 576
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+++ + Y++LI G C+ GN + + ++ML +G PN TS LI GL+E+G
Sbjct: 577 LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMV 636
Query: 481 GEVGKVV 487
E +V+
Sbjct: 637 VEADQVI 643
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+VP Y ++ + LT A + D M +GV PN TY ++I A C EA
Sbjct: 111 GYVPSVLAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
++L DM P+ ++ G+V+ A L +L P+ +++++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 370 LCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
+CK GK+ +A+K+FDE R G P ++YNTL+ G C++ EA ++ +M +KG+ P+
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
V T+ LI CK GN + + ++ +M ++G N+ +F+ LI+G + G
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 339
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
YVPS L + L + + A + +L P+ + +I LC G EA
Sbjct: 112 YVPS-VLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ + G P+++TYNTL+A + E+ A RL M++ G++PN+ T+N ++ G
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
CK G ++ ++ +EM+ +G P+ S++ L+ G ++G E V + T G
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ ++L+ L + KR H++FKN K + P+ FT LI CK+ +VE A+ + D+
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVLFKNMI-KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490
Query: 211 MPSMGMVPNLVTHT---------------------------------------------- 224
M G++P++VT++
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAEL 550
Query: 225 ----TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+L G+ +G + A +V+ +LDR W D + Y+VL+ G+ + G + A+ +
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 610
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G PN + +I + EA ++ +L + + +IDL EG
Sbjct: 611 MLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGN 670
Query: 341 VEDACELWKRLLRKNCMP 358
V+ ++ + + +P
Sbjct: 671 VDAVLDVLHGMAKDGLLP 688
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 220/435 (50%), Gaps = 14/435 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I L + R DA + L+ E+ + I ++ I G E A F
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHG-INIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++ +L+ + K Y+L+ M K + +V + +T ++K +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN-----IVISPYTYGTVVKGM 427
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C D++GA ++ EM + G PN+V +TT++ ++ +A RV ++ ++G PD
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+ G K R+ +A + EM +NG++PN TYG I + + + A + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + +P+ LC +I+ C++GKV +AC ++ ++ + + D + +++ L K K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A+++F E +G P + +Y LI G + + +A ++D+MVE+G+ PNV YNM
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ GFC+ G ++ +L+EM KG PN ++ +I+G +SG+ E ++ G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 495 SVESDSWNFLLTRIV 509
V +F+ T +V
Sbjct: 728 LVPD---SFVYTTLV 739
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 205/430 (47%), Gaps = 13/430 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N Y ++I + F +L E+K+ P+I C +L I + + A R + A
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK----AKRMDEA 506
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + ++ + + ++ ++ + K R + V+PN C LI
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLIN 565
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CKK V A M G++ + T+T ++ G +++A+ +F ++ +G P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D +Y VL++G+ KLG + A + DEM + G+ PN + Y +++ FC+ + +A+ LL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M + P++ C +ID C+ G + +A L+ + K +PD+ + +T++ C+
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE--SAEL-TEA-GRLWDDMVEKGVEPNV 429
+ A +F ++G S +N LI + + EL TE RL D ++ +PN
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN++I CK GN + + +M + P +++ L+ G + G E+ V
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 490 ATASGSVESD 499
A A+G +E D
Sbjct: 866 AIAAG-IEPD 874
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 199/423 (47%), Gaps = 10/423 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S+I L++A+ D S L E+ +N +K + I Y A A K +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V + L+N + + +++ + ++ + T +L+ L K D
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDK 607
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A + EM G+ P++ ++ ++ G+ G+++ A +F ++++ G P+ Y +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ + G + A +++DEM G+ PN VTY +I+ +CK EA L D+M +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP S + ++D C VE A ++ +K C A + +I+W+ K GK E K
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKT-ELK 785
Query: 381 -----KLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+L D F+R P+ +TYN +I +C+ L A L+ M + P V TY
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ G+ K+G E + +E + G P+ +S++I + G + +V A
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 495 SVE 497
+V+
Sbjct: 906 AVD 908
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 56/444 (12%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENLFITVIRNYGLAGRPEL 132
N TY + I A F + + + E+++ CG + L +I Y G+
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRE-----CGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + + + ++ L+N L +N + D +F+ R K + P+VF+ +LI
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLI 634
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K +++ A + DEM G+ PN++ + +LGG+ G+IE AK + ++ +G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+A TY ++DGY K G L +A ++ DEM+ G+ P+ Y +++ C+ A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC----MPDNAISSTIIH 368
++ S+A +I+ + + GK E E+ RL+ + P++ + +I
Sbjct: 755 FGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+LCKEG + AK+LF + + ++ P+++TY +L+ G + E ++D+ + G+EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 428 NVFTYNMLI----------------------------------------QGFCKIGNAKE 447
+ Y+++I GF K+G +
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+++E M+ P+ + LI
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELI 957
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 169/376 (44%), Gaps = 60/376 (15%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK-------KD------- 199
LL+AL++ R DL ++K + VV +V T ++LI A C+ KD
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVER-NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK 249
Query: 200 -------DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+V+GA+++ + M G+VP T+ ++ G +E+AK + ++ G
Sbjct: 250 EFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS 309
Query: 253 PDATTYTVLMDGYIKLGRLTDAVK------------------------------------ 276
D TY++L+DG +K GR DA K
Sbjct: 310 LDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ D M +G+ P Y +IE +C+ K + LL +M +R V S V+ +C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
G ++ A + K ++ C P+ I +T+I + + +A ++ E E+G P +
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
YN+LI G+ ++ + EA +MVE G++PN FTY I G+ + + ++EM
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 456 LDKGCFPNKTSFSLLI 471
+ G PNK + LI
Sbjct: 549 RECGVLPNKVLCTGLI 564
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 26/325 (8%)
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+S ++VP + C +L+ AL + + ++ V M +V ++ T+ ++ +
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234
Query: 234 GDIENAKRVF---------------------GDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G+++ K V ++ +G VP TY VL+DG K+ RL
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR--KYVPSSALCCK 330
DA ++ EM+ GV + TY ++I+ KG+ + A+ L+ +M+ P CC
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC- 353
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
I ++ +EG +E A L+ ++ +P +++I C+E + + +L E +R
Sbjct: 354 -ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ S TY T++ GMC S +L A + +M+ G PNV Y LI+ F + + +
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL 474
R+L+EM ++G P+ ++ LI GL
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGL 497
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T NI+I LCK+ ++E A + +M + ++P ++T+T++L GY G V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-----EDNGVEPNEVTYGVMI 297
F + + G PD Y+V+++ ++K G T A+ ++D+M D+G + + T ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
F K + A ++++M++ +Y+P SA ++I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN VT+ ++ G++E AK +F + + +P TYT L++GY K+GR + V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP-----SSALCCKVI 332
DE G+EP+ + Y V+I AF K + +A L+D M + V S + C ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ G++E A ++ + ++R +PD+A +I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 126/331 (38%), Gaps = 57/331 (17%)
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
V + GY+ + IE A VF + VP + VL+D ++ RL V
Sbjct: 152 VLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 281 MEDNGVEPNEVTYGVMIEAFCKG-----------KKSGEARN----------LLDDMLQR 319
M + V + TY ++I A C+ K E R L + M+ +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL--------- 370
VP +ID LC+ ++EDA L + DN S +I L
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 371 --------------------------CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
KEG + +AK LFD G IP Y +LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + + L +M ++ + + +TY +++G C G+ I++EM+ GC PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ LI+ ++ G+ +V+ G
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 187/359 (52%), Gaps = 2/359 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF T I + G+ E A++ F ++E+ V +V + NT+++ L + RYD MFK
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEA-FMFKEK 312
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ V P + T +IL+K L K + A VL EM G PN++ + ++ + G
Sbjct: 313 MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + ++ +G ++TY L+ GY K G+ A +++ EM G N+ ++
Sbjct: 373 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I C A + +ML R P L +I LC+ GK A ELW + L K
Sbjct: 433 VICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG 492
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ D S+ ++H LC+ GK+ E ++ E RG + ++YNTLI+G C + +L EA
Sbjct: 493 FLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAF 552
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+MV+KG++P+ +TY++LI+G + +E I+ + G P+ ++S++I+G
Sbjct: 553 MFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDG 611
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 219/477 (45%), Gaps = 36/477 (7%)
Query: 17 QSIGGARCSLSTITVTPPIKPWPQR-LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
+ IG A C L +T K +P + L+ + +L+ A++I S
Sbjct: 336 KRIGDAYCVLKEMTE----KGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLM--VSKGLS 389
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTEL-------KQNPEIK-----CGENLFITVIRN 123
TY+++I ++ D E LL E+ Q C ++F + +R
Sbjct: 390 LTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRF 449
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVV 182
G + LR N+ L TL++ L ++ ++ V L K F V
Sbjct: 450 VG---------EMLLR----NMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLV- 495
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
+ T N L+ LC+ +E R+ E+ G V + V++ T++ G ++ A
Sbjct: 496 -DTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMF 554
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ +G PD TY++L+ G + + ++ +A++ + + NG+ P+ TY VMI+ CK
Sbjct: 555 MDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCK 614
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+++ E + L D+M+ P++ + +I C G++ A EL + + K P++A
Sbjct: 615 AERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSAT 674
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I + ++ EAK L +E G P++ Y LI G + ++ + L +M
Sbjct: 675 YTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 734
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K V PN TY ++I G+ + GN E R+L EM +KG P+ ++ I G + G
Sbjct: 735 SKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQG 791
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 156/329 (47%), Gaps = 37/329 (11%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ TCNIL+ +L + + + + G+ P++ TT + + G +E A
Sbjct: 214 MFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGKVEEAI 272
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + + G VP+ TY ++DG GR +A ++M + GVEP +TY ++++
Sbjct: 273 ELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGL 332
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K K+ G+A +L +M ++ + P+ + +ID L E G + A E+ ++ K +
Sbjct: 333 TKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTS 392
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-------ERGSIPSLLT----------------- 396
+ +T+I CK G+ A++L E +GS S++
Sbjct: 393 STYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGE 452
Query: 397 ------------YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
TLI+G+C+ + ++A LW + KG + T N L+ G C+ G
Sbjct: 453 MLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGK 512
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+EG RI +E+L +G ++ S++ LI G
Sbjct: 513 LEEGFRIQKEILGRGFVMDRVSYNTLISG 541
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 331 VIDLLCEEGKVEDAC----ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I++ C + K D C +++ L K P + ++ L + + + + F
Sbjct: 186 LIEVYCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVV 244
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P + + T I C+ ++ EA L+ M E GV PNV TYN +I G G
Sbjct: 245 CKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYD 304
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
E E+M+++G P ++S+L++GL ++ G+ V+ T G
Sbjct: 305 EAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKG 352
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 226/446 (50%), Gaps = 14/446 (3%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+R++S NL + F +A K P + H+Y+ Y ++I L + R F AV +L+ E
Sbjct: 110 PERVLSRCGDAGNL--GYRFFVWASK-QPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEE 166
Query: 104 L-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ K+NP + E +FI ++R + + AV+ + K+ + LL+AL +N
Sbjct: 167 MRKENPYMLTPE-VFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN 225
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+F++ R +F PN+ L+ C++ + A VL ++ G P++V
Sbjct: 226 GSVKEAASLFEDMRVRFN--PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVV 283
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ +LGGY G + +A + ++ P+A ++T+L+ + K ++ +A+++ EM+
Sbjct: 284 YNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQ 343
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS--SALCCKVIDLLCEEGK 340
+G E + VTY +I FCK + +A +LDDM+Q+ + PS S LC + EE
Sbjct: 344 GSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEE-- 401
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNT 399
+E+ EL + + + C+PD I +T+I +CK G + EA +L+ E + G + P L TY
Sbjct: 402 LEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYIL 461
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGV--EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
++ G L EA + +MVE+G+ P T L + + + M
Sbjct: 462 MVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 521
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEV 483
KGC N +++++ I L+ +G+ E
Sbjct: 522 KGCELNVSAWTIWIHALFSNGHVKEA 547
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 161/352 (45%), Gaps = 41/352 (11%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK--FKVVPNVFTCNILIKALCKKDDVEG 203
+ S ++ L + +++ V + + R + + + P VF +L++ V+
Sbjct: 138 RHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI--VLMRRFASVRMVKK 195
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A+ VLDEMP G P+ +L G ++ A +F D+ R + P+ +T L+
Sbjct: 196 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLY 254
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ + G++ +A V+ ++++ G EP+ V Y ++ + +
Sbjct: 255 GWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQA-------------------- 294
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
GK+ DA +L + + NC P+ A + +I CK K+ EA ++F
Sbjct: 295 ---------------GKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIF 339
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
E + G ++TY TLI+G C+ +A + DDM++KG +P+ +Y ++ K
Sbjct: 340 TEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKK 399
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+E + ++EEM GC P+ ++ +I + + G+ E ++ A G
Sbjct: 400 EELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 451
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 162/292 (55%), Gaps = 1/292 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ +TC+ LI+ LC + A+ VLDEM VP++VT+T +L R + A ++
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ D+G PD TY V+++G + GR+ DA++ + + G EPN V+Y ++++ C
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 278
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
++ +A L+ +M Q+ P+ +I LC +G VE A E+ +++ + C P++
Sbjct: 279 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSY 338
Query: 364 STIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ ++H CK+ K+ +A D RG P +++YNTL+ +C S E+ A L + +
Sbjct: 339 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
KG P + +YN +I G K G KE + +L EM+ KG P+ ++S + GL
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 181/361 (50%), Gaps = 2/361 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+IR GR A+ + + V + LL A + Y + R K
Sbjct: 165 TLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 224
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
P++ T N+++ +C++ V+ AI L +PS G PN V++ +L G E+
Sbjct: 225 -GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ + G++ +G P+ T+ +L+ + G + A++V++++ G PN ++Y ++
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
AFCK KK +A LD M+ R P ++ LC G+V+ A EL +L K C P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+T+I L K GK EA +L +E +G P ++TY+T+ AG+C + +A R +
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ + G+ PN YN +I G CK I + M+ GC PN++++++LIEGL
Sbjct: 464 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE 523
Query: 478 G 478
G
Sbjct: 524 G 524
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 4/313 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V N ++ C V+ A R E + + T T++ G RG NA V
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAER---AVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++L R VPD TYT+L++ K A+K++DEM D G P+ VTY V++ C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A L ++ P++ V+ LC + EDA EL + +K C P+
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I +LC++G + A ++ ++ + G P+ L+YN L+ C+ ++ +A D MV
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+G P++ +YN L+ C+ G + +L ++ DKGC P S++ +I+GL ++G
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422
Query: 482 EVGKVVSMATASG 494
E ++++ + G
Sbjct: 423 EALELLNEMVSKG 435
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKT 136
TY+ +++ + + R DA+E L K P C N + V++ A R E A +
Sbjct: 232 TYNVVVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 287
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKA 194
+ + +V + N L++ L R LV L K+ PN + N L+ A
Sbjct: 288 MGEMGQKGCPPNVVTFNMLISFLC---RKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK+ ++ A+ LD M S G P++V++ T+L G+++ A + + D+G P
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 404
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+Y ++DG K G+ +A+++++EM G++P+ +TY + C+ + +A
Sbjct: 405 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 464
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P++ L +I LC+ + A +L+ ++ CMP+ + + +I L EG
Sbjct: 465 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 524
Query: 375 KIWEAKKLFDEF 386
I EA+ L DE
Sbjct: 525 LIKEARDLLDEL 536
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 156/315 (49%), Gaps = 16/315 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFS--HNYDTYHSIIHKLARARAFDAVESLLTEL 104
+V+ I ++ +D A++ K P++ N +Y+ ++ L A ++ E L+ E+
Sbjct: 236 VVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291
Query: 105 KQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
Q P N+ I+ + GL E A++ +I K+ + S N LL+A +
Sbjct: 292 GQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQ 348
Query: 163 KRYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
K+ D + L SR + P++ + N L+ ALC+ +V+ A+ +L ++ G P L
Sbjct: 349 KKMDKAMAFLDLMVSRGCY---PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+++ T++ G G + A + +++ +G PD TY+ + G + R+ DA++ +
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
++D G+ PN V Y +I CK +++ A +L M+ +P+ + +I+ L EG
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525
Query: 341 VEDACELWKRLLRKN 355
+++A +L L +
Sbjct: 526 IKEARDLLDELCSRG 540
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 120/245 (48%), Gaps = 12/245 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S + R+ ++ AL++ K+ S N +Y+ ++H + + D + L +
Sbjct: 306 LISFLCRKGLVEPALEVLEQIPKY--GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-N 162
P+I L + R +G ++AV+ +++ + S NT+++ L +
Sbjct: 364 RGCYPDIVSYNTLLTALCR----SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
K + + L+ N + P++ T + + LC++D +E AIR ++ MG+ PN V
Sbjct: 420 KTKEALELL--NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 477
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ I+ G R + +A +F ++ G +P+ +TYT+L++G G + +A ++DE+
Sbjct: 478 YNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELC 537
Query: 283 DNGVE 287
G E
Sbjct: 538 SRGEE 542
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 188/359 (52%), Gaps = 2/359 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF T I + G+ E AVK F ++E+ V +V + NT+++ L RYD MFK
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA-FMFKEK 309
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + P + T +IL+K L + + A VL EM G PN++ + ++ ++ G
Sbjct: 310 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + ++ +G ++TY L+ GY K G+ +A +++ EM G N+ ++
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I C A + +ML R P L +I LC+ GK A ELW + L K
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ D S+ ++H LC+ GK+ EA ++ E RG + ++YNTLI+G C +L EA
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+MV++G++P+ +TY++LI G + +E I+ ++ G P+ ++S++I+G
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 608
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 181/356 (50%), Gaps = 6/356 (1%)
Query: 152 LNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
L TL++ L ++ ++ + L F+ F V + T N L+ LC+ ++ A R+ E
Sbjct: 462 LTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTRTSNALLHGLCEAGKLDEAFRIQKE 519
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ G V + V++ T++ G + ++ A +++ RG PD TY++L+ G + +
Sbjct: 520 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 579
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A++ D+ + NG+ P+ TY VMI+ CK +++ E + D+M+ + P++ +
Sbjct: 580 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 639
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+I C G++ A EL + + K P++A +++I + ++ EAK LF+E G
Sbjct: 640 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 699
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ Y LI G + ++ + L +M K V PN TY ++I G+ + GN E
Sbjct: 700 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 759
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
R+L EM +KG P+ ++ I G + G E K + +E WN L+
Sbjct: 760 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIE--GWNKLI 813
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 187/415 (45%), Gaps = 17/415 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++ L RA+ +L E+ + P + NL + I L + +K
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL--NKAIEIKD 378
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKAL 195
+ + ++ S + NTL+ +N + D + K F V FT I + L
Sbjct: 379 LMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL--L 434
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C + A+R + EM M P TT++ G G A ++ L++G+V D
Sbjct: 435 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 494
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T L+ G + G+L +A ++ E+ G + V+Y +I C KK EA LD+
Sbjct: 495 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 554
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++R P + +I L KVE+A + W R +PD S +I CK +
Sbjct: 555 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 614
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
E ++ FDE ++ P+ + YN LI C S L+ A L +DM KG+ PN TY
Sbjct: 615 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 674
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
LI+G I +E + EEM +G PN ++ LI+G G++G++V +
Sbjct: 675 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY------GKLGQMVKV 723
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 166/347 (47%), Gaps = 5/347 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ TCNIL+ +L + ++ + D + G+ P++ TT + + G +E A
Sbjct: 211 MFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAV 269
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F + + G P+ T+ ++DG GR +A ++M + G+EP +TY ++++
Sbjct: 270 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 329
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K+ G+A +L +M ++ + P+ + +ID E G + A E+ ++ K +
Sbjct: 330 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 389
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +T+I CK G+ A++L E G + ++ ++I +C A R +
Sbjct: 390 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 449
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ + + P LI G CK G + + + + L+KG + + + L+ GL E+G
Sbjct: 450 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 509
Query: 480 EGEVGKVVSMATASGSV-ESDSWNFLLTRIVS--DLDSGAGALDELL 523
E ++ G V + S+N L++ LD LDE++
Sbjct: 510 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 556
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF + ++G P TT +L+ ++ + D + GV P+ + I AFC
Sbjct: 202 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFC 260
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
KG GKVE+A +L+ ++ P+
Sbjct: 261 KG-----------------------------------GKVEEAVKLFSKMEEAGVAPNVV 285
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I L G+ EA +F E ERG P+L+TY+ L+ G+ + + +A + +
Sbjct: 286 TFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 344
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +KG PNV YN LI F + G+ + I I + M+ KG ++++ LI+G ++G
Sbjct: 345 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 404
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVSDL--DSGAGALDELLVKN 526
+++ M + +V S+ ++ + S L DS + E+L++N
Sbjct: 405 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 454
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 331 VIDLLCEEGKVEDAC----ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I++ C + K D C +++ L K P + ++ L + + + + FD
Sbjct: 183 LIEVYCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 241
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P + + T I C+ ++ EA +L+ M E GV PNV T+N +I G G
Sbjct: 242 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 301
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
E E+M+++G P ++S+L++GL + G+ V+ T G
Sbjct: 302 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 349
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 224/458 (48%), Gaps = 28/458 (6%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+ LV + +++ LA + F ++ F H+ ++Y + H L AR + S+L E
Sbjct: 112 PRVLVEL---KEDPKLAFKFFKWSMT-RNGFKHSVESYCIVAHILFCARMYYDANSVLKE 167
Query: 104 LKQN------------------PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
+ + P + LF +I G E A++ F ++++F V
Sbjct: 168 MVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRV 223
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
RS N LL+ + + D V FK+ P VFT NI+I +CK+ DVE A
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+ +EM G+VP+ VT+ +++ G+ G +++ F ++ D PD TY L++ +
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K G+L ++ EM+ NG++PN V+Y +++AFCK +A DM + VP+
Sbjct: 343 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ID C+ G + DA L +L+ + + +I LC ++ EA++LF +
Sbjct: 403 YTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK 462
Query: 386 FER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+ G IP+L +YN LI G ++ + A L +++ +G++P++ Y I G C +
Sbjct: 463 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ ++ EM + G N ++ L++ ++SGN E
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 195/405 (48%), Gaps = 10/405 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I + + +A L E+K + + ++I +G GR + V F
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP-DTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ + V + N L+N + + + L F + PNV + + L+ A CK+
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLP-IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ +M +G+VPN T+T+++ G++ +A R+ ++L G + TYT
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG R+ +A ++ +M+ GV PN +Y +I F K K A LL+++ R
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P L I LC K+E A + + ++ I +T++ K G E
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEA----GRLWDDMVEKGVEPNVFTYNM 434
L DE + I +++T+ LI G+C++ +++A R+ +D G++ N +
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF---GLQANAAIFTA 618
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+I G CK + + E+M+ KG P++T+++ L++G ++ GN
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 24/368 (6%)
Query: 172 FKNSRHKFKVVPNVFTCN-------------ILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
FK+S + +V ++ C +L KA C DV + R + VP
Sbjct: 138 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNV-------CVP 190
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ + G +E A + F + P + L+ + KLG+ D +
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M G P TY +MI+ CK AR L ++M R VP + +ID +
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTY 397
G+++D ++ + C PD + +I+ CK GK+ + + E + G P++++Y
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+TL+ C+ + +A + + DM G+ PN +TY LI CKIGN + R+ EML
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIV--SDLDS 514
G N +++ LI+GL ++ E ++ +G + + S+N L+ V ++D
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 515 GAGALDEL 522
L+EL
Sbjct: 491 ALELLNEL 498
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 191/400 (47%), Gaps = 10/400 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT---VIRNYGLAGRPELAVKT 136
TY+S+I + D E+K C E IT +I + G+ + ++
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKD----MCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ ++ ++ +V S +TL++A + + + R + +VPN +T LI A C
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR-RVGLVPNEYTYTSLIDANC 413
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A R+ +EM +G+ N+VT+T ++ G ++ A+ +FG + G +P+
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y L+ G++K + A+++++E++ G++P+ + YG I C +K A+ ++++M
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ +S + ++D + G + L + + +I LCK +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 377 WEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+A F+ G + + +I G+C+ ++ A L++ MV+KG+ P+ Y
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ G K GN E + + ++M + G + +++ L+ GL
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+++IH +A+ D LL ELK IK L+ T I + E A
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+++ ++ + TL++A ++ + +HL+ + + + V T +LI L
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL--DEMKELDIEVTVVTFCVLIDGL 587
Query: 196 CKKDDVEGAIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK V A+ + + + G+ N T ++ G +E A +F ++ +G VPD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T YT LMDG K G + +A+ + D+M + G++ + + Y ++ + +AR+ L+
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP---DNAI 362
+M+ P LC V+ E G +++A EL L++ + DNA+
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNAL 758
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 73/321 (22%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ +V + L++ L +R +F V+PN+ + N LI K +++ A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELF-GKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L+E+ G+ P+L+ + T + G IE AK V ++ + G ++ YT LMD
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 265 YIKLGRLTDAVKVMDEME------------------------------------DNGVEP 288
Y K G T+ + ++DEM+ D G++
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N + MI+ CK + A L + M+Q+ V
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV-------------------------- 645
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
PD ++++ K+G + EA L D+ E G LL Y +L+ G+
Sbjct: 646 ---------PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Query: 408 AELTEAGRLWDDMVEKGVEPN 428
+L +A ++M+ +G+ P+
Sbjct: 697 NQLQKARSFLEEMIGEGIHPD 717
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 163/308 (52%), Gaps = 1/308 (0%)
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K+ H+ PN + N LI ALC ++ A L M G+ PN VT+ + G
Sbjct: 71 KSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGK 130
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G ++ A + G + G+ A T+ +++ K G+ +A KVM+ M +EPN +T
Sbjct: 131 AGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILT 190
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+++ AFCK + EA + D M++ + P+ +++L C +++ A EL + +
Sbjct: 191 LNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMA 250
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELT 411
R C P+ S ++ + G++ EA+ ++ G P+LL N +AG+C++ E+
Sbjct: 251 RSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMD 310
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A R M E+G N TYN L++GFCK+G E R+LEEM+ +G P+ T++S+LI
Sbjct: 311 LASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLI 370
Query: 472 EGLYESGN 479
+GL +G
Sbjct: 371 QGLCSAGQ 378
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 42/370 (11%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN--LVTHTTILGGYVWRGDIE 237
+ V + FT L+ C + + A R++ E GM P +V H +L G+ ++
Sbjct: 9 EFVHSEFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSEARLVD 68
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
AK + P++ +Y L+D GR+ +A + + M GV PN VTY M
Sbjct: 69 EAK---SHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMA 125
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
K EA L+ M + ++ V++ LC+ GK ++AC++ + +L +N
Sbjct: 126 TGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIE 185
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P+ + I+H CK + EA + D E G P+++T+N L+ C + ++ A L
Sbjct: 186 PNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAEL 245
Query: 417 WDDMVEKGVEPNVFTYNMLIQ-----------------------------------GFCK 441
+ M +PN TY++++Q G CK
Sbjct: 246 LETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCK 305
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDS 500
G R L M ++GC N +++ L+EG + G E +V+ A GS+ +S +
Sbjct: 306 TGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTT 365
Query: 501 WNFLLTRIVS 510
++ L+ + S
Sbjct: 366 YSVLIQGLCS 375
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 193/426 (45%), Gaps = 47/426 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE-- 131
F H+ TY +++H A FD + L+ E K + + G + V+ N L G E
Sbjct: 10 FVHSEFTYGTLVHGHCLAGEFDEAKRLVAEFK-DTGMSPGS---LVVLHNLMLKGFSEAR 65
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNAL-----VQNKRYDLVHLMFKNSRHKFKVVPNVF 186
L + + + + + + S NTL++AL +Q R +L M K +V N
Sbjct: 66 LVDEAKSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREEL-QAMAKRGVAPNRVTYNAM 124
Query: 187 ------------------------------TCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
T N +++ LCK + A +V++ M +
Sbjct: 125 ATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNI 184
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN++T IL + E A + +++ G+ P T+ L++ + ++ A +
Sbjct: 185 EPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAE 244
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+++ M + +PN VTY +M++ F + + EAR L+ ++ Y P+ +C + LC
Sbjct: 245 LLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLC 304
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
+ G+++ A + + C + A ++++ CK G++ EA+++ +E GS+P
Sbjct: 305 KTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDST 364
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVE---PNVFTYNMLIQGFCKIGNAKEGIRIL 452
TY+ LI G+C + ++ A + V + VE P+ T+ LI+ C++G +L
Sbjct: 365 TYSVLIQGLCSAGQIVHAFMVMLQ-VTRAVESARPDPATFVKLIEKLCELGEMDRAALVL 423
Query: 453 EEMLDK 458
E M D+
Sbjct: 424 ERMGDE 429
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 240/489 (49%), Gaps = 14/489 (2%)
Query: 14 CLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN 73
L +S+ A +LS + V P + P L P L++ + +L+++ +
Sbjct: 391 ALFKSVLSADKALSPLAVLPHLDGAPSSL-PNLLLTASAAVRPHATSLRLYSRMKSL--S 447
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
+ + H ++ L A AF A+ + + L+ + F ++R+ AG+P A
Sbjct: 448 LPISTASLHPLLSALPSAPAF-ALFADMFRLR----LPLCTTTFNIMLRHLCSAGKPARA 502
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ ++ + N + NT++ R + + R + + PN +T +I
Sbjct: 503 LELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 558
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK V+ A++V DEM + G V P V + ++GGY +G ++ A +++RG
Sbjct: 559 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 618
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
TY +L+ GR T+A ++++EM G+ P+ TY ++I CK +A +
Sbjct: 619 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 678
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++M +R + +I L ++G+V++ +L+ +R+ PD + + +I+
Sbjct: 679 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 738
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G I A ++ E E+ I P +TYNTL+ G+C + EA +L D+M E+G++P++ T
Sbjct: 739 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 798
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN LI G+ G+ K+ +RI EM++KG P +++ LI+GL ++G + +V
Sbjct: 799 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 858
Query: 492 ASGSVESDS 500
+G DS
Sbjct: 859 ENGITPDDS 867
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 172/371 (46%), Gaps = 20/371 (5%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q LD+ ++ G + N TY ++I + D + E+ E+K
Sbjct: 531 QAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 585
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVH 169
++ +I Y G+ + A+ R+ + V +V + N L++AL + R Y+LV
Sbjct: 586 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 645
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
M + P+VFT NILI CK+ +V+ A+ + + M G+ +VT+T ++
Sbjct: 646 EMGGKG-----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 700
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
+G ++ ++F + + RG PD Y L++ + G + A ++M EME + P+
Sbjct: 701 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 760
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+VTY ++ C + EAR L+D+M +R P +I +G V+DA +
Sbjct: 761 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 820
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
++ K P + +I LCK G+ +A+ + E E G P TY +LI G+
Sbjct: 821 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT--- 877
Query: 409 ELTEAGRLWDD 419
TE R DD
Sbjct: 878 --TEDERAIDD 886
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 206/417 (49%), Gaps = 8/417 (1%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
+F N H++ TY+ + L +A D + +K + + L ++ ++ G
Sbjct: 94 RFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG-VSPNNRLLGFLVSSFAEKG 152
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
+ A T L ++ F V+ +N+LLN LV+ R + +F + +F+ + T
Sbjct: 153 KLHFA--TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF-DEHLRFQSCNDTKTF 209
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NILI+ LC E A+ +L M G P++VT+ T++ G+ ++ A +F D+
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-K 268
Query: 249 RGWV--PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G V PD TYT ++ GY K G++ +A ++D+M G+ P VT+ V+++ + K +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A + M+ P +ID C G+V LW+ + + P+ S +
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ LC E ++ +A++L + + IP YN +I G C++ ++ EA + ++M +K
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+P+ T+ +LI G C G E + I +M+ GC P+K + S L+ L ++G E
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 5/377 (1%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+ R+ AG +LA + F ++ V + R L L+++ + + + S F
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS---F 165
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+V N L+ L K D VE A+++ DE + T ++ G G E A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV-EPNEVTYGVMIE 298
+ G + G PD TY L+ G+ K L A ++ +++ V P+ VTY MI
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K EA +LLDDML+ P++ ++D + G++ A E+ +++ C P
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I C+ G++ + +L++E RG P+ TY+ LI +C L +A L
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ K + P F YN +I GFCK G E I+EEM K C P+K +F++LI G
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 478 GNEGEVGKVVSMATASG 494
G E + A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 2/314 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +IR G+ E A++ + F + + + NTL+ ++ + MFK+ +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
P+V T +I CK + A +LD+M +G+ P VT ++ GY G++
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ + G ++ G PD T+T L+DGY ++G+++ ++ +EM G+ PN TY ++
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I A C + +AR LL + + +P + VID C+ GKV +A + + + +K C
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD + +I C +G+++EA +F + G P +T ++L++ + ++ EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 416 LWDDMVEKGVEPNV 429
L + + KG NV
Sbjct: 509 L-NQIARKGQSNNV 521
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 183/325 (56%), Gaps = 2/325 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN +T N +I LCK A +VL EM S ++P+ V +TT++ G+ G + A +
Sbjct: 326 PNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKW 385
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L + PD TYT L+ G+ + G++ + + EM G++P+EVTY +I+ +CK
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A +L ++M+Q P+ +ID LC+ G+++ A EL + +K + I
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++++ +CK G I +A KL E E I P +TY T+I C ++ +A +L +M+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++G++P V T+N+L+ GFC +G ++G R+L ML+KG P+ +++ L++ +
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 482 EVGKVVSMATASG-SVESDSWNFLL 505
K+ G + +S+++N L+
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 228/460 (49%), Gaps = 17/460 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIK 111
+ +++A+++F G S N +Y+ II+ L R LL ++ P++
Sbjct: 240 EGIEMAIKVFCEYG-----ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVV 294
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHL 170
+ TVI Y G + A+K ++ ++ + + N+++ L + K ++ +
Sbjct: 295 S----YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ + K ++P+ LI K V A + DEM S + P+ +T+TT++ G+
Sbjct: 351 LREMMSQK--IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G + + +F +++ RG PD TYT L+D Y K G + +A + +EM G+ PN
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTYG +I+ CK + A LLD+M ++ + + +++ +C+ G +E A +L K
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAE 409
+ PD +T+I C+ G I +A KL E +RG P+++T+N L+ G C
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L + RL M+EKG+ P+ TYN L++ C + +I + M ++G P+ ++++
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRI 508
LI+G ++ N E + G V + S+N L+ R
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 195/409 (47%), Gaps = 13/409 (3%)
Query: 77 NYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N TY+SII L + ++F+A E +L E+ + +I ++ T+I + G A K
Sbjct: 327 NRYTYNSIILLLCKIGKSFEA-EKVLREM-MSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNIL 191
F + + + TL+ Q + +L H M + P+ T L
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG-----LKPDEVTYTTL 439
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK ++ A + +EM MGM PN+VT+ ++ G G+++ A + ++ +G
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+ Y +++G K G + A+K+M EME G++P+ +TY +I+A+C+ +A
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LL +ML R P+ +++ C G +ED L +L K +PD +T++ C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ K++ +G P TYN LI G C++ L EA L+ +M+EKG P V
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+YN LI+ F K E + EEM G + ++ ++ YE G+
Sbjct: 680 SYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 190/415 (45%), Gaps = 59/415 (14%)
Query: 165 YDLVHLMFKNSRHKFKVV----------------PNVFTCNILIKALCKKDDVEGAIRVL 208
++LVH F NS+ + V PN +I + L + + A ++L
Sbjct: 154 HELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLL 213
Query: 209 DEMPSMGMVP---------------------------------NLVTHTTILGGYVWRGD 235
D++ S G+V N ++ I+ G
Sbjct: 214 DKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGK 273
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A R+ + R PD +Y+ ++DGY LG L A+K+MD+M+ G++PN TY
Sbjct: 274 VKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNS 333
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I CK KS EA +L +M+ +K +P + + +I + G V A + + +L K
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +T+I + GK+ E + LF E RG P +TY TLI C++ E+ A
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L ++MV+ G+ PN+ TY LI G CK G +L+EM KG N ++ ++ G+
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------DLDSGAGALDELL 523
++GN + K++ +G ++ D+ + T ++ D+D L E+L
Sbjct: 514 CKAGNIEQAIKLMKEMEVAG-IDPDAITY--TTVIDAYCRLGDIDKAHKLLQEML 565
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 150/292 (51%), Gaps = 2/292 (0%)
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
N + + PN+ T LI LCK +++ A +LDEM G+ N+ + +++ G
Sbjct: 457 NEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKA 516
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G+IE A ++ ++ G PDA TYT ++D Y +LG + A K++ EM D G++P VT+
Sbjct: 517 GNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
V++ FC + LL ML++ VP + ++ C + +++KR+
Sbjct: 577 NVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ PD+ + +I CK + EA L+ E E+G +P++ +YN LI + ++ E
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
A L+++M G+ + YN + + G+ + + + +E ++K C N+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK-CLLNE 747
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 165/350 (47%), Gaps = 3/350 (0%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S +Y TY ++I + ++L E+ +K E + T+I Y AG A
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG-LKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + ++ + L++ L ++ D + + R K + NV N ++
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQLNVCIYNSMVNG 512
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
+CK ++E AI+++ EM G+ P+ +T+TT++ Y GDI+ A ++ ++LDRG P
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+ VLM+G+ LG L D +++ M + G+ P+ +TY +++ C +
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYK 632
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + P S +I C+ +++A L+K ++ K +P + +I K+
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKK 692
Query: 375 KIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
KI EA++LF+E G + YN + E ++ L D+ +EK
Sbjct: 693 KILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 207/427 (48%), Gaps = 47/427 (11%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLMFK 173
VI + + E A + R++ + + N ++ +L ++ L L+
Sbjct: 152 AVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLD 211
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
N +P V T ILI+A + + A+++L+EM + G++P++ T+ I+ G
Sbjct: 212 N------CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 265
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G +E A + + +G PD +Y +L+ ++ G+ + K++ EM G EPN+VTY
Sbjct: 266 GMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 325
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++I + C+ + EA ++L M++++ P + +I LC+EG+++ A + ++
Sbjct: 326 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 385
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--------------------------- 386
C+PD +TI+ LCK G +A ++F++
Sbjct: 386 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 445
Query: 387 ---------ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+G P +TYN+LI+ +C + EA L DDM + G P V +YN+++
Sbjct: 446 ALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 505
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G CK+ + I + EM++KGC PN+T++ LLIEG+ +G E ++ + + +
Sbjct: 506 GLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVIS 565
Query: 498 SDSWNFL 504
DS+ L
Sbjct: 566 QDSFKRL 572
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 171/344 (49%), Gaps = 4/344 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+VF N +I CK + +E A +VL+ M + G +P++VT+ ++G R + A V
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L +P TYT+L++ I G + +A+K+++EM G+ P+ TY +I CK
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A L+ + + P ++ +GK ++ +L + + C P+
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324
Query: 363 SSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC+ G+I EA + E+ P +Y+ LI+ +C+ L A + D M+
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G P++ YN ++ CK GNA + + I ++ GC PN +S++ +I L+ G+
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444
Query: 482 E-VGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDEL 522
+G V +M + + ++N L++ + D ++ G LD++
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDM 488
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 145/286 (50%), Gaps = 5/286 (1%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++++G+ PD T L+ G+ + A +VM+ +E + EP+ Y +I FCK +
Sbjct: 104 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNQ 162
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A +L+ M R ++P +I LC K+ A + +LL NCMP +
Sbjct: 163 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTI 222
Query: 366 IIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I EG I EA KL +E RG +P + TYN +I GMC+ + A L + KG
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
EP+V +YN+L++ F G EG +++ EM +GC PNK ++S+LI L G E
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342
Query: 485 KVVS-MATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
V+ M + ++ S++ L++ + + LD G +D ++ C
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 13/318 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPE-LAVK 135
TY++II + + + L+T L P++ N+ + N G E L +
Sbjct: 254 TYNAIIRGMCKEGMVERAAELITSLTSKGCEPDV-ISYNILLRAFLNQGKWDEGEKLVAE 312
Query: 136 TFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F R E V S+ L+++L + R D + K K ++ P+ ++ + LI A
Sbjct: 313 MFSRGCEPNKVTYSI-----LISSLCRFGRIDEAISVLKVMIEK-ELTPDTYSYDPLISA 366
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK+ ++ AI ++D M S G +P++V + TIL G+ A +F + G P+
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 426
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
++Y ++ G + A+ ++ M G++P+E+TY +I C+ EA LLD
Sbjct: 427 VSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLD 486
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
DM Q + P+ V+ LC+ +++DA ++ ++ K C P+ +I + G
Sbjct: 487 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 546
Query: 375 KIWEAKKLFDE-FERGSI 391
EA +L + F R I
Sbjct: 547 WRTEAMELANSLFSRDVI 564
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 80/165 (48%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
K+++ C+ GK ++ + L+ K PD + + +I I +A ++ + E
Sbjct: 83 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH 142
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ P + YN +I+G C+ ++ A ++ + M +G P++ TYN++I C +
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L+++L C P ++++LIE G E K++ A G
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 247
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 183/325 (56%), Gaps = 2/325 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN +T N +I LCK A +VL EM S ++P+ V +TT++ G+ G + A +
Sbjct: 326 PNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKW 385
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L + PD TYT L+ G+ + G++ + + EM G++P+EVTY +I+ +CK
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A +L ++M+Q P+ +ID LC+ G+++ A EL + +K + I
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++++ +CK G I +A KL E E I P +TY T+I C ++ +A +L +M+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++G++P V T+N+L+ GFC +G ++G R+L ML+KG P+ +++ L++ +
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 482 EVGKVVSMATASG-SVESDSWNFLL 505
K+ G + +S+++N L+
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 228/460 (49%), Gaps = 17/460 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIK 111
+ +++A+++F G S N +Y+ II+ L R LL ++ P++
Sbjct: 240 EGIEMAIKVFCEYG-----ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVV 294
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHL 170
+ TVI Y G + A+K ++ ++ + + N+++ L + K ++ +
Sbjct: 295 S----YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ + K ++P+ LI K V A + DEM S + P+ +T+TT++ G+
Sbjct: 351 LREMMSQK--IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G + + +F +++ RG PD TYT L+D Y K G + +A + +EM G+ PN
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTYG +I+ CK + A LLD+M ++ + + +++ +C+ G +E A +L K
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAE 409
+ PD +T+I C+ G I +A KL E +RG P+++T+N L+ G C
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L + RL M+EKG+ P+ TYN L++ C + +I + M ++G P+ ++++
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRI 508
LI+G ++ N E + G V + S+N L+ R
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 195/409 (47%), Gaps = 13/409 (3%)
Query: 77 NYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N TY+SII L + ++F+A E +L E+ + +I ++ T+I + G A K
Sbjct: 327 NRYTYNSIILLLCKIGKSFEA-EKVLREM-MSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNIL 191
F + + + TL+ Q + +L H M + P+ T L
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG-----LKPDEVTYTTL 439
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK ++ A + +EM MGM PN+VT+ ++ G G+++ A + ++ +G
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+ Y +++G K G + A+K+M EME G++P+ +TY +I+A+C+ +A
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LL +ML R P+ +++ C G +ED L +L K +PD +T++ C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ K++ +G P TYN LI G C++ L EA L+ +M+EKG P V
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVT 679
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+YN LI+ F K E + EEM G + ++ ++ YE G+
Sbjct: 680 SYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 179/381 (46%), Gaps = 43/381 (11%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP------------------------ 218
PN +I + L + + A ++LD++ S G+V
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247
Query: 219 ---------NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
N ++ I+ G ++ A R+ + R PD +Y+ ++DGY LG
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
L A+K+MD+M+ G++PN TY +I CK KS EA +L +M+ +K +P + +
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I + G V A + + +L K PD +T+I + GK+ E + LF E R
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P +TY TLI C++ E+ A L ++MV+ G+ PN+ TY LI G CK G
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRI 508
+L+EM KG N ++ ++ G+ ++GN + K++ +G ++ D+ + T +
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG-IDPDAITY--TTV 544
Query: 509 VS------DLDSGAGALDELL 523
+ D+D L E+L
Sbjct: 545 IDAYCRLGDIDKAHKLLQEML 565
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 149/292 (51%), Gaps = 2/292 (0%)
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
N + + PN+ T LI LCK +++ A +LDEM G+ N+ + +++ G
Sbjct: 457 NEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKA 516
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G+IE A ++ ++ G PDA TYT ++D Y +LG + A K++ EM D G++P VT+
Sbjct: 517 GNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
V++ FC + LL ML++ VP + ++ C + +++KR+
Sbjct: 577 NVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ PD+ + +I CK + EA L+ E E+G +P++ +YN LI + + E
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXE 696
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
A L+++M G+ + YN + + G+ + + + +E ++K C N+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK-CLLNE 747
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 164/350 (46%), Gaps = 3/350 (0%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S +Y TY ++I + ++L E+ +K E + T+I Y AG A
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG-LKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + ++ + L++ L ++ D + + R K + NV N ++
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQLNVCIYNSMVNG 512
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
+CK ++E AI+++ EM G+ P+ +T+TT++ Y GDI+ A ++ ++LDRG P
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+ VLM+G+ LG L D +++ M + G+ P+ +TY +++ C +
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYK 632
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + P S +I C+ +++A L+K ++ K +P + +I K+
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKR 692
Query: 375 KIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
K EA++LF+E G + YN + E ++ L D+ +EK
Sbjct: 693 KFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 206/417 (49%), Gaps = 8/417 (1%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
+F N H++ TY+ + L +A D + +K + + L ++ ++ G
Sbjct: 94 RFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG-VSPNNRLLGFLVSSFAEKG 152
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
+ A T L ++ F V+ +N+LLN LV+ R + +F + +F+ + T
Sbjct: 153 KLHFA--TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF-DEHLRFQSCNDTKTF 209
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NILI+ LC E A+ +L M G P++VT+ T++ G+ ++ A +F D+
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-K 268
Query: 249 RGWV--PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G V PD TYT ++ GY K G++ +A ++D+M G+ P VT+ V+++ + K +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A + M+ P +ID C G+V LW+ + + P+ S +
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ LC E ++ +A++L + + IP YN +I G C++ ++ EA + ++M +K
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+P+ T+ +LI G C G E + I +M+ GC P+K + S L+ L ++G E
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 5/377 (1%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+ R+ AG +LA + F ++ V + R L L+++ + + + S F
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS---F 165
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+V N L+ L K D VE A+++ DE + T ++ G G E A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV-EPNEVTYGVMIE 298
+ G + G PD TY L+ G+ K L A ++ +++ V P+ VTY MI
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K EA +LLDDML+ P++ ++D + G++ A E+ +++ C P
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I C+ G++ + +L++E RG P+ TY+ LI +C L +A L
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ K + P F YN +I GFCK G E I+EEM K C P+K +F++LI G
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 478 GNEGEVGKVVSMATASG 494
G E + A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 2/314 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +IR G+ E A++ + F + + + NTL+ ++ + MFK+ +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
P+V T +I CK + A +LD+M +G+ P VT ++ GY G++
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ + G ++ G PD T+T L+DGY ++G+++ ++ +EM G+ PN TY ++
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I A C + +AR LL + + +P + VID C+ GKV +A + + + +K C
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD + +I C +G+++EA +F + G P +T ++L++ + ++ EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 416 LWDDMVEKGVEPNV 429
L + + KG NV
Sbjct: 509 L-NQIARKGQSNNV 521
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 211/445 (47%), Gaps = 24/445 (5%)
Query: 86 HKLARARAFDAVESLLTELKQ---------------NPEIKCGENLFITVIRNYGLAGRP 130
H L RAR ++ +S+L L Q P K ++F +IR Y G
Sbjct: 55 HILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMV 114
Query: 131 ELAVKTF--LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
A++TF + I FN SV + N LL LV+ ++ V L FK + +V P+V T
Sbjct: 115 GDALETFRLMGIRGFN--PSVYTCNMLLGKLVKERKVGAVWLFFKEMLAR-RVCPDVSTF 171
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NILI LC + ++ A +L +M G VP++VT+ T+L Y +G + A + +
Sbjct: 172 NILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGS 231
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G DA TY +L+D K R ++ +M + PNE+TY +I F K K G
Sbjct: 232 KGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGA 291
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A + +M +P+ +ID C +G E A + + + P+ S +++
Sbjct: 292 ATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLN 351
Query: 369 WLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC+ K +K + + G I + Y +I G+C + L E+ +L D M++ GV P
Sbjct: 352 GLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVP 411
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+V T+++LI GFC++G K I+ +M G PN ++ LI Y G+V +
Sbjct: 412 DVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLI---YNYCKTGDVVEAF 468
Query: 488 SMATASGSVESDSWNFLLTRIVSDL 512
+ A + D+ F+ +VS L
Sbjct: 469 KVYVAMSRIGYDANCFICNVLVSSL 493
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 197/412 (47%), Gaps = 5/412 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
TV+ Y GR + A++ ++ ++ + N L++ L +N R +L+ K R +
Sbjct: 208 TVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKR 267
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PN T N +I K+ + A R+ EM + ++PN VT+ ++ G+ G+ E
Sbjct: 268 M-ISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQ 326
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + + G P+ +Y+ L++G + + + +++ M NG+ + Y MI+
Sbjct: 327 ALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMID 386
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C+ E+ LLD ML+ VP +I+ C GK+++ E+ ++ + P
Sbjct: 387 GLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAP 446
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
++ I +T+I+ CK G + EA K++ R G + N L++ +C+ ++ A +
Sbjct: 447 NSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFF 506
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M + G PN T++ +I G+ GN + + +EM+ G P+ ++ L++ L +
Sbjct: 507 HHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRA 566
Query: 478 GNEGEVGKVV-SMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKN 526
G E +++ + +V++ ++N +L L DE++ +N
Sbjct: 567 GKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 192/411 (46%), Gaps = 10/411 (2%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ-NPEIKCGENLFITVIRNYGLAGRPELA 133
S N TY+SII+ + A + E+ N C + +I + G E A
Sbjct: 270 SPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVT--YNALIDGHCHDGNFEQA 327
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ +E + + S + LLN L ++ +++L + + R +V + +I
Sbjct: 328 LTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCI-AYTAMID 386
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC+ + ++++LD+M G+VP++VT + ++ G+ G I+N K + + G P
Sbjct: 387 GLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAP 446
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
++ YT L+ Y K G + +A KV M G + N V++ + CK K G A
Sbjct: 447 NSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFF 506
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M + VP+S +I+ G A ++ +++ P + ++ LC+
Sbjct: 507 HHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRA 566
Query: 374 GKIWEAKKLFDEFERGSIPS---LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
GK EAK+L D+ IPS +TYNT++ +S LT+A L+D+MV++ V P+ +
Sbjct: 567 GKFKEAKRLLDKLHY--IPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCF-PNKTSFSLLIEGLYESGNE 480
TY ++ G + G + +L KG P K ++ ++GL+ +G
Sbjct: 625 TYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQS 675
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 186/423 (43%), Gaps = 1/423 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I L R A L + + ++ T + AG+ + A+
Sbjct: 625 TYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCED 684
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+EK + + + N +LN + + +F + P++ T NIL+ KK
Sbjct: 685 MEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKK 744
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ + + M G+ P+ +T +++ G+ ++ ++ +L G D T+
Sbjct: 745 NLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFN 804
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ Y + + A +++ M + P+ T+ +I + E+ LL +ML+R
Sbjct: 805 MLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLER 864
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P +++ +C G + A +L + + S ++ L K GK+ EA
Sbjct: 865 GCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEA 924
Query: 380 KKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K + D R S IP++ T+ TL+ C + L EA +L D M V+ +V YN+LI G
Sbjct: 925 KLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISG 984
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
C G+ +++ +E+ +G +PN T++ +LI+ ++ + G+V+ V S
Sbjct: 985 LCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGVIS 1044
Query: 499 DSW 501
W
Sbjct: 1045 GHW 1047
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 160/366 (43%), Gaps = 4/366 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I YG +G A F + K S + LL AL + ++ + +
Sbjct: 521 FDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL-DKL 579
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H + T N ++ K + A+ + DEM ++P+ T+ I G + RG +
Sbjct: 580 HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKM 639
Query: 237 ENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A +G++L +G V P+ YT +DG + G+ A+ ++ME NG+ + + V
Sbjct: 640 VAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNV 699
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++ + + K +A ++ M + PS A ++ ++ + L+ ++R
Sbjct: 700 ILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRT 759
Query: 355 NCMPDNAISSTIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA 413
PD ++I CK + K L G T+N LI CE+ E+ +A
Sbjct: 760 GIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKA 819
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L + M + P++ T++ +I ++ +E +L EML++GC P++ + L+
Sbjct: 820 FDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNR 879
Query: 474 LYESGN 479
+ G+
Sbjct: 880 MCRMGH 885
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 214/454 (47%), Gaps = 54/454 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-----FITVIRNYGLAG 128
F H +DT+H + + FD V L+ L P+ +L F + +Y
Sbjct: 115 FRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVL 174
Query: 129 RPEL------------AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
L A + F + + V +V + N ++ +V + L F
Sbjct: 175 DALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLE-KGLGFMRKM 233
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVL---------------------------- 208
K + PNV T N LI A CKK V+ A+ +L
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRM 293
Query: 209 -------DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+EM G+VP+ VT+ T++ G+ G++ + +++ +G P+ TYT L
Sbjct: 294 SEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTL 353
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++ K G L+ AV++ D+M G+ PNE TY +I+ FC+ EA +L +M+ +
Sbjct: 354 INCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF 413
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
PS ++ C G+V++A + + ++ + PD ST+I C+E ++ +A +
Sbjct: 414 SPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQ 473
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ +E E+G +P +TY++LI G+C +L EA L+ +M+ +G+ P+ TY LI +C
Sbjct: 474 MKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC 533
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G + +R+ +EM+ +G P+ ++S+LI GL
Sbjct: 534 VDGELSKALRLHDEMVQRGFLPDNVTYSVLINGL 567
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 172/323 (53%), Gaps = 2/323 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N+++N L R V + + R K +VP+ T N L+ CK+ ++ + +L E
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGK-GLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+ PN+VT+TT++ G++ A +F + RG P+ TYT L+DG+ + G
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A KV+ EM +G P+ VTY ++ +C + EA +L M++R P
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
VI C E ++ A ++ + ++ K +PD S++I LC + K+ EA LF E RG
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +TY +LI C EL++A RL D+MV++G P+ TY++LI G K K
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577
Query: 450 RILEEMLDKGCFPNKTSFSLLIE 472
R+L ++ + P+ +++ LIE
Sbjct: 578 RLLLKLFYEESVPDDVTYNTLIE 600
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 169/313 (53%), Gaps = 16/313 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T LI +CK ++ A+ + D+M G+ PN T+TT++ G+ +G + A +V
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKV 404
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ G+ P TY L+ GY LGR+ +AV ++ M + G+ P+ V+Y +I FC+
Sbjct: 405 LSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ G+A + ++M+++ +P + +I LC + K+ +A +L++ ++R+ PD
Sbjct: 465 ERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVT 524
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I+ C +G++ +A +L DE +RG +P +TY+ LI G+ + A A RL +
Sbjct: 525 YTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLF 584
Query: 422 EKGVEPNVFTYNMLIQ---------------GFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ P+ TYN LI+ GFC G E R+ + ML + PN
Sbjct: 585 YEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAI 644
Query: 467 FSLLIEGLYESGN 479
++L+I G GN
Sbjct: 645 YNLMIHGHSRGGN 657
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 194/411 (47%), Gaps = 25/411 (6%)
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
+H L R + + SL +L G +LF + + L P + F + K
Sbjct: 83 LHILVRFKLYRTAHSLAADLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVK-- 140
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD----- 199
S+ L + AL L+HL +RH F P V + N ++ AL ++
Sbjct: 141 ---SLSRLGFVPKALT------LLHLA---NRHGF--APTVLSYNAVLDALLRRSSSNHR 186
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D + A RV +M G+ PN+ T+ I+ G V +GD+E + G P+ TY
Sbjct: 187 DYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYN 246
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+D K ++ +A+ ++ M GV N ++Y +I C + E L+++M +
Sbjct: 247 TLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGK 306
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP +++ C+EG + L ++ K P+ +T+I+ +CK G + A
Sbjct: 307 GLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRA 366
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++FD+ RG P+ TY TLI G C+ + EA ++ +M+ G P+V TYN L+ G
Sbjct: 367 VEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHG 426
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+C +G +E + IL M+++G P+ S+S +I G E E+GK M
Sbjct: 427 YCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR---ERELGKAFQM 474
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 162/335 (48%), Gaps = 47/335 (14%)
Query: 171 MFKNSRHKFKVVPNVFTC----NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+F++ F + + F+ ++++K+L + V A+ +L G P ++++ +
Sbjct: 114 LFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAV 173
Query: 227 LGGYVWRG-----DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
L + R D ++A+RVF D++ G P+ TY V++ G + G L + M +M
Sbjct: 174 LDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM 233
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E G+ PN VTY +I+A CK K KV
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKK-----------------------------------KV 258
Query: 342 EDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
++A L R + + N IS +++I+ LC +G++ E +L +E +G +P +TYNT
Sbjct: 259 KEAMALL-RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+ G C+ L + L +MV KG+ PNV TY LI CK GN + I ++M +G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
PN+ +++ LI+G + G E KV+S SG
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 16/287 (5%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++ Y GR + AV + + + V S +T++ + + M +
Sbjct: 420 YNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMV 479
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K V+P+ T + LI+ LC + + A + EM G+ P+ VT+T+++ Y G++
Sbjct: 480 EK-GVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGEL 538
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A R+ +++ RG++PD TY+VL++G K R A +++ ++ P++VTY +
Sbjct: 539 SKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTL 598
Query: 297 IE---------------AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
IE FC EA + MLQR + P++A+ +I G V
Sbjct: 599 IENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNV 658
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
A L+ L + ++ L +EG E +L R
Sbjct: 659 HKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILR 705
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 16/226 (7%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T LI A C ++ A+R+ DEM G +P+ VT++ ++ G + + AKR+
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRL 579
Query: 243 FGDILDRGWVPDATTYTVLMD---------------GYIKLGRLTDAVKVMDEMEDNGVE 287
+ VPD TY L++ G+ G + +A +V M +
Sbjct: 580 LLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHK 639
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
PN Y +MI +G +A NL ++ + + ++ L EG ++ L
Sbjct: 640 PNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRL 699
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIP 392
+ +LR + D ++ ++ KEG + + E + G +P
Sbjct: 700 LQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLP 745
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 9/211 (4%)
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD----NAISSTIIHWLCKEGKIWE- 378
SSA+ V+ L G V A L R P NA+ ++ + ++
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++F + R + P++ TYN +I G+ +L + M ++G+ PNV TYN LI
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
CK KE + +L M G N S++ +I GL G EVG++V G V
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310
Query: 498 SD-SWNFLLTRIV--SDLDSGAGALDELLVK 525
+ ++N L+ +L G L E++ K
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK 341
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL-------------- 227
+P+ T ++LI L KK + A R+L ++ VP+ VT+ T++
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613
Query: 228 -GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
G+ +G + A RVF +L R P+A Y +++ G+ + G + A + E+E +
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSF 673
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+ V +++A + + E LL ++L+ + + + ++++ +EG ++
Sbjct: 674 ACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLN 733
Query: 347 LWKRLLRKNCMPDNAISST 365
+ + + +PD I S+
Sbjct: 734 VLTEMAKDGLLPDGGIHSS 752
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 206/430 (47%), Gaps = 11/430 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+ + + +LA A D V+ L E++ + C E + I + AG + A+KTF R
Sbjct: 57 AHEATVRRLAAAGDLDGVQYTLQEMRLR-GVACPEGALVAAICAFARAGAADRALKTFYR 115
Query: 140 IEK--FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+VR N LL+AL++ V ++ N R K V PNV+T N+LIKALC+
Sbjct: 116 ARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMR-KAGVEPNVYTYNLLIKALCQ 174
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D V A R+LDEM G P+ V+HTTI+ ++ A+ + ++ P +
Sbjct: 175 NDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGAS 229
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++ R+ + V+DEM G+ P+ V Y ++ AFCK ++ A +L M+
Sbjct: 230 YNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMV 289
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
VP+ ++ ++GKV DA +W ++ + P + +I LC G +
Sbjct: 290 TEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLK 349
Query: 378 EAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +F + +P + TY+TLI G ++ +L A +W+DM G +PNV Y ++
Sbjct: 350 RALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMV 409
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK + ++++M + C PN +F+ LI L + G G V G
Sbjct: 410 DVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCP 469
Query: 497 ESD-SWNFLL 505
+D ++N LL
Sbjct: 470 PNDRTYNELL 479
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 168/335 (50%), Gaps = 2/335 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VPNV T +L+K V A+ + + M + G P+ +++ ++ G GD++ A
Sbjct: 294 VPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALF 353
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF + +PD TY+ L+DG+ K G L A+ + ++M + G +PN V Y M++ C
Sbjct: 354 VFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLC 413
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K +A NL+D M P++ +I LC+ G+ A ++ + R C P++
Sbjct: 414 KKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDR 473
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ ++H L +EG +A ++ E G SL++YNT I+G+C+ + EA L M
Sbjct: 474 TYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRM 533
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN- 479
+ +G++P+ FT+N +I +CK GN + +L M C N +++ L+ GL
Sbjct: 534 IIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKL 593
Query: 480 EGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDS 514
+ + ++ M +WN L+ I + L +
Sbjct: 594 DDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGT 628
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + +LD+A+ I++ + N Y +++ L + FD E+L+ ++
Sbjct: 373 LIDGFSKAGDLDVAMSIWN--DMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSL 430
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
C N F T+IR+ GR A+ F + ++ + R+ N LL+ L +
Sbjct: 431 E---NCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGN 487
Query: 165 Y-DLVHLMFKNSRHKFK---------------------------------VVPNVFTCNI 190
D + ++ + H F+ + P+ FT N
Sbjct: 488 CEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNA 547
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I A CK+ +V A +L M ++ N+V +T+++ G + +++A +L G
Sbjct: 548 IIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEG 607
Query: 251 WVPDATTYTVLMDG-YIKLGRL 271
P+ T+ VL+ G + LG +
Sbjct: 608 ICPNEATWNVLVRGIFTHLGTI 629
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 225/470 (47%), Gaps = 43/470 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-AV 97
P + +++ F++ + D A +H + TY+SII L +A+A D A+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEM--LDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E L T +K C + +++ Y +G+P+ A+
Sbjct: 252 EVLNTMVKNGVMPDC--MTYNSILHGYCSSGQPKEAI----------------------- 286
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
++ R D V P+V T ++L+ LCK A ++ D M G+
Sbjct: 287 GFLKKMRSDGVE-------------PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P + T+ T+L GY +G + + ++ G PD +++L+ Y G++ A+ V
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLV 393
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+M G+ PN VTYG +I CK + +A + M+ P + + +I LC
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
K E A EL +L + + ++II CKEG++ E++KLF+ R G P+++T
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNTLI G C + ++ EA +L MV G++PN TY+ LI G+CKI ++ + + +EM
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLL 505
G P+ +++++++GL+++ ++ T SG+ +E ++N +L
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 167/352 (47%), Gaps = 4/352 (1%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AGR +L + K + + LL L +KR + + +PNVF
Sbjct: 100 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVF 159
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ NIL+K LC ++ + A+ +L M G P++V++TT++ G+ GD + A +
Sbjct: 160 SYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++LDRG +PD TY ++ K + A++V++ M NGV P+ +TY ++ +C
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ EA L M P ++D LC+ G+ +A +++ + ++ P+
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T++ +G + E L D R I P ++ LI ++ +A ++ M +
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQ 399
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+G+ PN TY +I CK G ++ + E+M+D+G P ++ LI GL
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 148/339 (43%), Gaps = 40/339 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
+V P++ T ILI K LC A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---GWVPDATTYTV 260
+ VL M +G +PN+ ++ +L G + A + + D G PD +YT
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++G+ K G A EM D G+ P+ VTY +I A CK + +A +L+ M++
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P ++ C G+ ++A K++ PD S ++ +LCK G+ EA+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K+FD +RG P + TY TL+ G L E L D MV G+ P+ + +++LI +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G + + + +M +G PN ++ +I L +SG
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 172/360 (47%), Gaps = 3/360 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+ L+ A + D L+F R + + PN T +I LCK VE A+ ++M
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQ-GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ P + + +++ G E A+ + ++LDRG + + ++D + K GR+
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
++ K+ + M GV+PN +TY +I +C K EA LL M+ P++ +
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I+ C+ ++EDA L+K + PD + I+ L + + AK+L+ E G+
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
L TYN ++ G+C++ +A +++ ++ ++ T+N++I K+G E
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLLTRIV 509
+ G PN ++ L+ E + G E+ ++ +SM +V+S NF++ ++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY +L+ + GRL + + G + + + +++ C K++ +A +
Sbjct: 84 TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL--RKNCMPDNAIS-STII 367
+ L M + +P+ ++ LC+E + ++A EL + R P + +S +T+I
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ KEG +A + E +RG +P ++TYN++IA +C++ + +A + + MV+ GV
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ TYN ++ G+C G KE I L++M G P+ ++SLL++ L ++G E K+
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 487 VSMATASG 494
T G
Sbjct: 324 FDSMTKRG 331
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 144/300 (48%), Gaps = 2/300 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I + CK+ V + ++ + M +G+ PN++T+ T++ GY G ++ A ++
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G P+ TY+ L++GY K+ R+ DA+ + EME +GV P+ +TY ++++ +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+++ A+ L + + + ++ LC+ +DA ++++ L + +
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I L K G+ EAK LF F G +P+ TY + + L E +L+ M +
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G + N +++ + G L M+D+ F + S + L L G E
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQE 773
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC---MPDNAISS 364
+AR++ D++L+R S + + + + A + R+ R PD
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYG 91
Query: 365 TIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL-WDDMVE 422
+I C+ G++ L + ++G + + L+ G+C ++A + M E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK---GCFPNKTSFSLLIEGLYESGN 479
G PNVF+YN+L++G C ++E + +L M D G P+ S++ +I G ++ G+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 106/252 (42%), Gaps = 12/252 (4%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+D A+++ +G N TY ++I+ + + L E++ + P+I
Sbjct: 527 MDEAMKLL--SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT- 583
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ +++ R A + ++RI + Q + + N +L+ L +NK D MF+
Sbjct: 584 ---YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Query: 174 N-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N K+ F NI+I AL K + A + S G+VPN T+ + +
Sbjct: 641 NLCLMDLKLEARTF--NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+G +E ++F + D G D+ ++ ++ G +T A + +++ T
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758
Query: 293 YGVMIEAFCKGK 304
+ I+ GK
Sbjct: 759 ASLFIDLLSGGK 770
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 190/381 (49%), Gaps = 10/381 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKN 174
T+I G+ A++ R++ VQ +V NT+++++ + N+ +DL M
Sbjct: 166 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 225
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P+V T + LI C + AI + ++M S + P++ T + ++ G+ G
Sbjct: 226 G-----ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEG 280
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ AK V ++ +G PD TY LMDGY + ++ A + + M GV N +Y
Sbjct: 281 RVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYN 340
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+MI FCK KK EA NL +M + +P +ID LC+ GK+ A +L + +
Sbjct: 341 IMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR 400
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
D ++I+ LCK ++ +A L + + G P + TY LI G+C+ L +A
Sbjct: 401 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDA 460
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+++D++ KG V+TY ++IQGFC + + +L +M D GC PN ++ ++I
Sbjct: 461 QNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS 520
Query: 474 LYESGNEGEVGKVVSMATASG 494
L+E K++ A G
Sbjct: 521 LFEKDENDMAEKLLREMIARG 541
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 175/355 (49%), Gaps = 2/355 (0%)
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
V +F RI N + +L +LV+ Y + + + ++ T NILI
Sbjct: 41 VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFN-GIASDLVTFNILIN 99
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+ + V + G PN +T TT++ G +G I A ++ G+
Sbjct: 100 CFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHL 159
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ Y L++G K+G+ + A++++ ++ V+PN V Y +I++ CK K EA +L
Sbjct: 160 NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 219
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M+ + P +I C GK+ DA L+ +++ + PD S ++ CKE
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279
Query: 374 GKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EAK + ++G P ++TY +L+ G C ++ +A +++ M + GV NV +Y
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N++I GFCKI E + + +EM K P+ +++ LI+GL +SG K+V
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLV 394
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 160/334 (47%), Gaps = 6/334 (1%)
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+DD + + + ++ P + ILG V + A + ++ G D T
Sbjct: 34 QDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVT 93
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +L++ + +LG + V + G EPN +T +I+ C + +A + D ++
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + +I+ LC+ G+ A +L +R+ K P+ + +TII +CK +
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 213
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA L+ E +G P ++TY+ LI+G C +L +A L++ M+ + + P+V+T+++L+
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
GFCK G KE +L M+ +G P+ ++ L++G Y + K + A G V
Sbjct: 274 DGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDG-YCLVKQVNKAKSIFNTMAQGGV 332
Query: 497 ESD--SWNFLLTRI--VSDLDSGAGALDELLVKN 526
++ S+N ++ + +D E+ KN
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 90 RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
R +A L +KQ IK + +++ Y L + A F + + V +V
Sbjct: 279 EGRVKEAKNVLAMMMKQG--IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+S N ++N + K+ D +FK H ++P+V T N LI LCK + A++++D
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFK-EMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVD 395
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
EM G+ + +T+ +IL ++ A + + D G PD TYT+L+DG K G
Sbjct: 396 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
RL DA + +++ G TY VMI+ FC +A LL M +P++
Sbjct: 456 RLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYE 515
Query: 330 KVIDLLCEEGKVEDACELWKRLLRK 354
+I L E +D ++ ++LLR+
Sbjct: 516 IIILSLFE----KDENDMAEKLLRE 536
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 202/404 (50%), Gaps = 4/404 (0%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ + P RL S++ Q LALQ+F F + + +Y II KL R+R F +E
Sbjct: 4 PKPISPFRLSSLLRLQNGPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEME 63
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+L++L++ E +F VI YG A P+ A++TF I +F QR+V+SLN+LLNA
Sbjct: 64 QILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNA 123
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L+ K ++ + + KF PNV T NILI A C + A V DEM + P
Sbjct: 124 LLNCKEFEKFDGIL-SGIDKF-ATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCP 181
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKV 277
N+VT T++ G ++ A R+ D++ V P+A Y LM G ++ L+ A ++
Sbjct: 182 NVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFEL 241
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
EM N + + Y +I A K + E +L++M + P + +I C
Sbjct: 242 KKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCN 301
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
E E A + + ++ K C PD + II LCKEGK EA LF++ RG P + +
Sbjct: 302 EKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGS 361
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
Y L G+CE + EA + D+MV KG P + ++ C
Sbjct: 362 YRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALC 405
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+D+ P+ TY +L++ GRL DA V DEM V PN VT+G +I C+ +
Sbjct: 140 IDKFATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRL 199
Query: 307 GEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L +DM++ V P++ + ++ LC ++ A EL K ++ D+ I ST
Sbjct: 200 DEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYST 259
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I L K G+ E + +E E G P +TYN +I+G C + A + ++MV KG
Sbjct: 260 LIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKG 319
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+P+V +YN++I G CK G +E + E+M +GC P+ S+ +L +GL E E
Sbjct: 320 CKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAA 379
Query: 485 KVVSMATASGSVESDSWNFLLTRIVSDLDSG 515
++ G + T+ V L SG
Sbjct: 380 FILDEMVFKGYAPKSAS---XTKFVEALCSG 407
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 9/235 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T+ ++I L R D L ++ + +K N F+ GL EL++
Sbjct: 182 NVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVK--PNAFVYASLMKGLCRVNELSLAF 239
Query: 137 FLRIE----KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
L+ E K + + S TL+ AL + R D V ++ + R P+ T N +I
Sbjct: 240 ELKKEMVANKLRLDSGIYS--TLIAALFKVGRKDEVFVVLEEMREN-GCKPDTVTYNAMI 296
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C + D E A VL+EM G P+++++ I+ G G A +F D+ RG
Sbjct: 297 SGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCT 356
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
PD +Y +L DG + + +A ++DEM G P + +EA C G++ G
Sbjct: 357 PDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALCSGRELG 411
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTE 412
K P+ + +I+ C G++ +A +FDE R + P+++T+ TLI+G+C + L E
Sbjct: 142 KFATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDE 201
Query: 413 AGRLWDDMVEK-GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A RL +DMV+ V+PN F Y L++G C++ + +EM+ + +S LI
Sbjct: 202 ASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLI 261
Query: 472 EGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVS--DLDSGAGALDELLVKNC 527
L++ G + EV V+ +G ++ ++N +++ + D ++ G L+E++VK C
Sbjct: 262 AALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGC 320
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 6/366 (1%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ +F + N L++ + + R +F+ P+V++ N++IK +CK
Sbjct: 188 KASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKV 247
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATT 257
DV+ A+ +++ M G P+ VTH ++ G ++ + V + G +P+ T
Sbjct: 248 GDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVT 307
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT ++ GY K GR+ DA+ V ++M G PN VTY V+I + K G A + M+
Sbjct: 308 YTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMI 367
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R+ +P +ID C G+++DA ++W + + + P+ IIH CK+ +
Sbjct: 368 LRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSG 427
Query: 378 EAKKLFDEFE-RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA + R I P YN +I +C+ ++ EA + +M EKG P+ +TY +L
Sbjct: 428 EALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTIL 487
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G C G E + +M++ GC P+ + I L +SG GEV ++ +A
Sbjct: 488 IIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMRIAAGGA- 546
Query: 496 VESDSW 501
S SW
Sbjct: 547 --SSSW 550
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 2/294 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F VI+ G + A++ R+++F + N L+N L + K + + +
Sbjct: 237 FNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQ 296
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+PNV T +I CK +E A+ V ++M ++G PN+VT+ ++ GY G++
Sbjct: 297 RDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNM 356
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A V+ ++ R +PD T++ L+DGY + G+L DA+K+ EM ++PN T+ ++
Sbjct: 357 GSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCII 416
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I FCK +SGEA + L M R + P + + VID+LC+ GKV++A + + K
Sbjct: 417 IHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKG 476
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
C PD + +I C +G+I EA F + E G P + N+ I+ + +S
Sbjct: 477 CRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSG 530
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 39/313 (12%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM-GMVPNLVTHTTILGGYVWRGDI 236
+ + P+ + +I +C+ A+++ D+M G PN + + G G +
Sbjct: 120 QLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLL 179
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV-EPNEVTYGV 295
+ A + G +A Y LMD +I GR+ DAV + + GV P+ ++ V
Sbjct: 180 DAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNV 239
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ CK G V+ A EL +R+
Sbjct: 240 VIKGVCK-----------------------------------VGDVQKALELVERMDEFG 264
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEA 413
C PD + +++ LC+ ++ + +++ +R + P+++TY ++I+G C++ + +A
Sbjct: 265 CSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDA 324
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+++DMV G PNV TYN+LI G+ K GN + + ++M+ + C P+ +FS LI+G
Sbjct: 325 MAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDG 384
Query: 474 LYESGNEGEVGKV 486
G + K+
Sbjct: 385 YCRCGQLDDAMKI 397
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 129/305 (42%), Gaps = 37/305 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ +++ L RA+ +L L+++ + +VI Y AGR E A+ +
Sbjct: 271 THNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVY-- 328
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
N PNV T N+LI K
Sbjct: 329 ----------------------------------NDMVAVGTSPNVVTYNVLINGYGKAG 354
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A+ V +M +P++VT ++++ GY G +++A +++ ++ P+A T+
Sbjct: 355 NMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFC 414
Query: 260 VLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++ + K R +A+ + +M + P Y +I+ CKG K EA +L +M +
Sbjct: 415 IIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEE 474
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +I C +G++ +A + +++ C PD+ + ++ I L K G E
Sbjct: 475 KGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGE 534
Query: 379 AKKLF 383
+
Sbjct: 535 VDHIM 539
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 189/390 (48%), Gaps = 34/390 (8%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L++ IR Y AGR AV F R++ F + + N +++ALV +D H ++
Sbjct: 55 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV------------------ 217
V P++ T I +++ C A+R+L +P G V
Sbjct: 115 L-AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 173
Query: 218 -------------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
PNL +L RGD+ A + G ++ RG + TY + + G
Sbjct: 174 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 233
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ GRL +AV+++D M V P+ VTY +I CK EA + L M+ + +P
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 292
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ID C+ V++A EL K + K +PD ++I+ LC EG + A +LF+
Sbjct: 293 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 352
Query: 385 EFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E + +G P ++ YN+L+ G+C + A ++ ++M E+G P++ TYN++I G CK+G
Sbjct: 353 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 412
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
N + ++ + + KG P+ +F+ LI+G
Sbjct: 413 NISDATVVMNDAIMKGYLPDVFTFNTLIDG 442
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 226/492 (45%), Gaps = 32/492 (6%)
Query: 29 ITVTPPIKPWPQRLYPKR-------LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTY 81
+T P I R P R +V ++ + A Q+F H + N +
Sbjct: 135 LTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQM--LHTHVFPNLAAF 192
Query: 82 HSIIHKLA-RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTFL 138
+ ++H L R +A L +++ I NLF I GL AGR AV+
Sbjct: 193 NKVLHALCKRGDVLEAGLLLGKVIQRGMSI----NLFTYNIWIRGLCEAGRLPEAVRLVD 248
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILI 192
+ + V V + NTL+ L + M + + H + +P+ FT N +I
Sbjct: 249 GMRAYAVP-DVVTYNTLIRGLCKKS-------MPQEAMHYLRRMMNQGCLPDDFTYNTII 300
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK V+ A +L + G VP+ VT+ +++ G GD+E A +F + +G
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y L+ G G + A++VM+EM + G P+ TY ++I CK +A +
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++D + + Y+P +ID C+ K++ A +L +R+ PD +++++ LCK
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
GK+ E + F E +G P+ +TYN LI C S ++ EA ++ M ++G+ P+ +
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 540
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+N LI GFC+ G+ + + +++ +KG +F+ LI N K+
Sbjct: 541 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML 600
Query: 492 ASGSVESDSWNF 503
+ G +DS+ +
Sbjct: 601 SKGH-RADSYTY 611
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 167/322 (51%), Gaps = 2/322 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N L + +F ++ K + P++ N L+K LC + + A++V++EM
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 391
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++ T+ ++ G G+I +A V D + +G++PD T+ L+DGY K +L
Sbjct: 392 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 451
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++ M + G+ P+ +TY ++ CK K E +M+ + P+ +I+
Sbjct: 452 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 511
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIP 392
C K+E+A ++ ++ ++ PD +T+I+ C+ G + A LF + E +G
Sbjct: 512 NFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA 571
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ T+NTLI + A +++D+M+ KG + +TY +LI G CK N L
Sbjct: 572 TADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 631
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
EM+ KG P+ ++F +I L
Sbjct: 632 VEMIKKGFIPSMSTFGRVINSL 653
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 159/299 (53%), Gaps = 1/299 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP+ T LI LC + DVE A+ + +E + G+ P++V + +++ G +G I +A +
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
V ++ + G PD TY ++++G K+G ++DA VM++ G P+ T+ +I+ +C
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K K A L++ M + P + V++ LC+ GKV + E ++ ++ K C P+
Sbjct: 445 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 504
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I C+ K+ EA K+ + + G P +++NTLI G C + +L A L+ +
Sbjct: 505 TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 564
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
EKG T+N LI F N +I +EML KG + ++ +LI+G ++ N
Sbjct: 565 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I+A + + A+ + M P + I+ V + A +V+ +L G
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD T+T+ + + R A++++ + G V Y ++ + +AR
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQ 175
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI-IHWL 370
L D ML P+ A KV+ LC+ G V +A L +++++ M N + I I L
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG-MSINLFTYNIWIRGL 234
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
C+ G++ EA +L D ++P ++TYNTLI G+C+ + EA M+ +G P+ F
Sbjct: 235 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TYN +I G+CKI +E +L++ + KG P++ ++ LI GL G+ ++ + A
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354
Query: 491 TASG 494
A G
Sbjct: 355 QAKG 358
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 1/281 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T NI+I LCK ++ A V+++ G +P++ T T++ GY R +++A ++
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ + G PD TY +++G K G++ + + EM G PN +TY ++IE FC+
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 515
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K EA ++ M Q P + +I C G +E A L+++L K
Sbjct: 516 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 575
Query: 363 SSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I + + A+K+FDE +G TY LI G C++A + A +M+
Sbjct: 576 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 635
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+KG P++ T+ +I + + I+ M+ G P
Sbjct: 636 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y I A+ + + +A + + M P++ ++D L + + A +++ R+L
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
PD + + C + A +L RG++ Y T++ G+
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTH 171
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A +L+D M+ V PN+ +N ++ CK G+ E +L +++ +G N ++++ I
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
GL E+G E ++V A + ++N L+
Sbjct: 232 RGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 265
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 212/420 (50%), Gaps = 17/420 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLAGRPE 131
FSH ++ ++ L RAR + + L E + N +K + F ++IR+YG AG +
Sbjct: 96 FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQ 155
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+VK F +++ + SV + N+LL+ L++ R + H +F R + V P+ +T N L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK V+ A R+ +M P++VT+ TI+ G G ++ A V +L +
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 252 --VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
P+ +YT L+ GY + +AV V +M G++PN VTY +I+ + + E
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI 335
Query: 310 RNLL---DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+++L +D + P + +I C+ G ++ A ++++ +L PD+A S +
Sbjct: 336 KDILIGGNDAFT-TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVL 394
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSI-------PSLLTYNTLIAGMCESAELTEAGRLWD 418
I LC + A+ LF+E FE+ + P YN + +C + + +A +++
Sbjct: 395 IRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR 454
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++++GV+ + +Y LI G C+ G K +L ML + P+ ++ LLI+GL + G
Sbjct: 455 QLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 218/501 (43%), Gaps = 49/501 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLT-ELK 105
L++ + +D A +IF +H N + TY++II L RA ++L+ LK
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCN--PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLK 272
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
+ ++ + T++R Y + + AV F + ++ + + NTL+ L + RY
Sbjct: 273 KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRY 332
Query: 166 DLVHLMFKNSRHKFKV-VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D + + F P+ T NILIKA C ++ A++V EM +M + P+ +++
Sbjct: 333 DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 392
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWV-------PDATTYTVLMDGYIKLGRLTDAVKV 277
++ R + + A+ +F ++ ++ + P A Y + + G+ A KV
Sbjct: 393 VLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKV 452
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++ GV+ + +Y +I C+ K A LL ML+R++VP +ID L +
Sbjct: 453 FRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 511
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK---------------EGKIWE---- 378
G+ A + +R+LR + +P +++ L K E +I +
Sbjct: 512 IGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDL 571
Query: 379 ----AKKLFD--EFERGSIPSLLTYNT--------LIAGMCESAELTEAGRLWDDMVEKG 424
+ LF + E+ + L Y+ L+ +CE+ +L +A L +EK
Sbjct: 572 STQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKS 631
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
++ T N +I+G CK E + E+++ G + +L L +G E+
Sbjct: 632 QMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQ 691
Query: 485 KVVS-MATASGSVESDSWNFL 504
V MAT ESD + L
Sbjct: 692 FVSKRMATLR---ESDDCSVL 709
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 37/233 (15%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ Y G ++VK+ M+ G+ P+ +T+ ++ K ++G A +L D+M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM- 199
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+R Y PD+ +T+I+ CK +
Sbjct: 200 RRTY---------------------------------GVTPDSYTFNTLINGFCKNSMVD 226
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNM 434
EA ++F + E P ++TYNT+I G+C + ++ A + M++K V PNV +Y
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
L++G+C E + + +ML +G PN +++ LI+GL E+ E+ ++
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 227/438 (51%), Gaps = 19/438 (4%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E
Sbjct: 23 KNAEHALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
++++ +I +YG G + +VK F ++E+ V+R+++S + L + + RY + F N
Sbjct: 81 DMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N+LI VE A R +++ S + P++VT+ T++ GY
Sbjct: 140 KMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ ++ P TYT L+ GY + R+ DA+++++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR+LL +M+ + P +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIA 402
+ + +I CK GK +A KLFD+ I PS YN LI
Sbjct: 320 LSIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLIEKDIILRPQSTLHMEPS--AYNPLIE 377
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+C + + +A L +++ GV+ ++ + N LI+G + G+ IL+ ML +
Sbjct: 378 YLCNNGQTGKAETLVRQLMKLGVQDSI-SLNTLIRGHSQEGSPDSAFEILKIMLRRKVDS 436
Query: 463 NKTSFSLLIEGLYESGNE 480
K+++ L++ Y NE
Sbjct: 437 EKSAYDSLVQS-YLKRNE 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 35/298 (11%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
++I + K+ V+ ++++ +M +G+ + ++ + RG +KR F +++
Sbjct: 85 LMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNE 144
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P T+ VL+ G+ G++ A + ++++ + P+ VTY MI + + KK EA
Sbjct: 145 GIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRVKKMEEA 204
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+M ++K P+ +I +V+DA L
Sbjct: 205 EKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRL---------------------- 242
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP-N 428
+ E K L G P+ +TY+TL+ G+C++ +++EA L +MV+K + P +
Sbjct: 243 ------VEEMKGL------GIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKD 290
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ LI CK GN +L+ M+ + +LIE ++G + K+
Sbjct: 291 NSIFIRLISSQCKAGNLDAAADVLKAMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKL 348
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 44/312 (14%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N TH I+ + +A+ + D+ +G D + +++D Y K G + ++VK+
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLF 103
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME+ GVE +Y + + + + M+ ++Y
Sbjct: 104 QKMEELGVERTIKSYDALFKVISRRGRY---------MMSKRY----------------- 137
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+ +++ + P + +I GK+ A + F++ + I P ++TY
Sbjct: 138 ---------FNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTY 188
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I G ++ EA + + +M EK ++P V TY LI+G+ I + +R++EEM
Sbjct: 189 NTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKG 248
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------D 511
G PN ++S L+ GL ++ E ++ D N + R++S +
Sbjct: 249 LGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKD--NSIFIRLISSQCKAGN 306
Query: 512 LDSGAGALDELL 523
LD+ A L ++
Sbjct: 307 LDAAADVLKAMI 318
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 208/399 (52%), Gaps = 3/399 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+SI++ + R+ LL ++++ +K + T+I + G + A+ F
Sbjct: 185 TYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKE 243
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ SV + N+L+ L + +++ L+ K+ + ++VPNV T N+L+ K+
Sbjct: 244 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 302
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + EM + G+ PN++T+ T++ GY + + A + ++ PD T+T
Sbjct: 303 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 362
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ GY + R+ D +KV + G+ N VTY ++++ FC+ K A L +M+
Sbjct: 363 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 422
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P ++D LC+ GK+E A E+++ L + + +TII +CK GK+ +A
Sbjct: 423 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 482
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF +G P+++TY +I+G+C+ L+EA L M E G PN TYN LI+
Sbjct: 483 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ G+ +++EEM G + +S ++I+ L +
Sbjct: 543 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 581
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 210/398 (52%), Gaps = 3/398 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +++ +G LA+ ++E+ NV+ V + +T++++L ++ D +FK
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + +V T N L++ LCK +L +M S +VPN++T +L +V G +
Sbjct: 246 TK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A ++ +++ RG P+ TY LMDGY RL++A ++D M N P+ VT+ +
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 364
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ +C K+ + + ++ +R V ++ ++ C+ GK++ A EL++ ++
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
+PD ++ LC GK+ +A ++F++ ++ + ++ Y T+I GMC+ ++ +A
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ + KGV+PNV TY ++I G CK G+ E +L +M + G PN +++ LI
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Query: 476 ESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIVSDL 512
G+ K++ M + S ++ S ++ ++S +
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAM 582
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 161/297 (54%), Gaps = 1/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N LIK L + V A+ ++D M G P++VT+ +I+ G GD A +
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 205
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +R D TY+ ++D + G + A+ + EME G++ + VTY ++ CK
Sbjct: 206 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 265
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K + LL DM+ R+ VP+ ++D+ +EGK+++A EL+K ++ + P+
Sbjct: 266 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 325
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ C + ++ EA + D R P ++T+ +LI G C + + +++ ++
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 385
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++G+ N TY++L+QGFC+ G K + +EM+ G P+ ++ +L++GL ++G
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 442
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 38/320 (11%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L + +V K+ D + L + R + +P++ + A+ + + ++
Sbjct: 50 LRSGIVDIKKDDAIALFQEMIRSR--PLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 107
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ N+ T ++ + A V G ++ G+ PD TT+ L+ G G++++A
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V ++D M +NG +P+ VTY +++
Sbjct: 168 VVLVDRMVENGCQPDVVTYN-----------------------------------SIVNG 192
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
+C G A +L +++ +N D STII LC++G I A LF E E +G S
Sbjct: 193 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 252
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN+L+ G+C++ + + L DMV + + PNV T+N+L+ F K G +E + +
Sbjct: 253 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 312
Query: 454 EMLDKGCFPNKTSFSLLIEG 473
EM+ +G PN +++ L++G
Sbjct: 313 EMITRGISPNIITYNTLMDG 332
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 190/487 (39%), Gaps = 102/487 (20%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
S N TY++++ ++L + +N KC ++ F ++I+ Y + R +
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKGYCMVKRVD 375
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+K F I K + + + + L+ Q+ + L +F+ V+P+V T IL
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE-MVSHGVLPDVMTYGIL 434
Query: 192 IKALCKKDDVEGAIRVLDEM-----------------------------------PSMGM 216
+ LC +E A+ + +++ P G+
Sbjct: 435 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 494
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN++T+T ++ G +G + A + + + G P+ TY L+ +++ G LT + K
Sbjct: 495 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 554
Query: 277 VMDEMEDNGVEPNEVTYGVMIEA-----------FCKGKKSGEARNLLDDMLQRKYVPSS 325
+++EM+ G + + ++I+ +C K S ++LL+ K SS
Sbjct: 555 LIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSS 614
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
K+ C L N + ++S ++ ++ + + +
Sbjct: 615 LTFVKMF-----------PCNTITTSLNVNTIEARGMNSAELN---RDLRKLRRSSVLKK 660
Query: 386 FERGSIPSLLTYNTLIAGMCESAELT----------------EAGR-------------- 415
F+ + L+T L G+ E AE AGR
Sbjct: 661 FKNRDVRVLVTNELLTWGL-EDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAE 719
Query: 416 -LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +M+++G+ PN TY+ LI GFCK E ++L+ M+ KG + L+ GL
Sbjct: 720 ELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG----DSDIRYLLAGL 775
Query: 475 YESGNEG 481
+G
Sbjct: 776 MRKKRKG 782
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 378 EAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A LF E R +PSL+ ++ + + + + + G+ N++T N++I
Sbjct: 61 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
FC+ +L +++ G P+ T+F+ LI+GL+ G E +V +G
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A+ + +++ RG P+ TY+ L+DG+ K RL +A +++D M G
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAG 774
Query: 296 MIEAFCKGKKSGEARNLLDDM 316
++ KG ++ NL DD+
Sbjct: 775 LMRKKRKGSETEGWENLPDDL 795
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 184/374 (49%), Gaps = 3/374 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG + AV + +F + + N LLN L+ R +F++ P+ +
Sbjct: 160 AGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGW 219
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ N++IK +C+ + + A+ +++ M G P+ +TH ++ G + + +
Sbjct: 220 SFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRL 279
Query: 247 LDRG-WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
G +P+ TYT ++ GY K GR+ DA+ V ++M ++G PN VTY V+I + K
Sbjct: 280 QRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALD 339
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A + ++ R+ P +ID C G+++DA +WK + + + P+ S
Sbjct: 340 MESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSI 399
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
IIH LCK+ + EA E R I P YN +I +C+ ++ EA + DM EK
Sbjct: 400 IIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEK 459
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G P+ +TY +LI G C G E I + +M++ GC P+K + + I + ++G EV
Sbjct: 460 GCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEV 519
Query: 484 GKVVSMATASGSVE 497
+++ +A+ S
Sbjct: 520 DQIMLIASGHASAS 533
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 189/366 (51%), Gaps = 12/366 (3%)
Query: 57 LDLALQIFHYAGKFHPNFS-HNYDTYHSIIHKLARARAFDAV---ESLLTELKQNPEIKC 112
LD A+ + A +F + Y+ +++ +AR RA DAV ES + + +P+
Sbjct: 163 LDAAVTLLTKASQFGRRIEPYAYNNLLNLL--IARGRAQDAVALFESWIQDGLYSPD--- 217
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
G + F VI+ G + A++ R+ +F + N L++ L + K+ + H +
Sbjct: 218 GWS-FNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLL 276
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ + +PNV T +I CK +E A+ V ++M G PN VT+ ++ GY
Sbjct: 277 RRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGK 336
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
D+E+A R++ ++ R PD T++ L+DGY + G+L DA+++ EM + ++PN T
Sbjct: 337 ALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYT 396
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRL 351
+ ++I + CK +S EA L ++ R + P + + VID+LC+ G+VE+A + +
Sbjct: 397 FSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDM 456
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
K C PD + +I C +G+I EA LF + E G P +T N+ I+ + ++
Sbjct: 457 EEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMP 516
Query: 411 TEAGRL 416
E ++
Sbjct: 517 NEVDQI 522
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 204 AIRVLDEM--PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTV 260
A+R+ + P + + P+ +++ ++ G +A ++F + D+ G++PDA ++
Sbjct: 93 ALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSF 152
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+ G L AV ++ + G Y ++ ++ +A L + +Q
Sbjct: 153 VAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDG 212
Query: 321 -YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
Y P VI +C G + A EL +R+ C PD + ++ LC+ ++
Sbjct: 213 LYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRG 272
Query: 380 KKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
L +R + P+++TY ++I+G C++ + +A +++DM+E G PN TYN+LI
Sbjct: 273 HDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLIN 332
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G+ K + + +R+ +++ + C P+ +FS LI+G G
Sbjct: 333 GYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQ 374
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 219/437 (50%), Gaps = 6/437 (1%)
Query: 46 RLVSMIFRQQNLD-LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
RLV + R Q+ + +AL F++A + + H+ Y++++ L++ R +L L
Sbjct: 165 RLVCAVLRSQDDERIALDFFYWADR-QWRYRHDAIVYYTMLDILSKTRLCQGARRIL-RL 222
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
I+ F V+ +Y AG A++ ++K V+ + NT + LV+ +
Sbjct: 223 MTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNK 282
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ L F + P++ + N LIK C ++ A+ ++ EMP G P+ V++
Sbjct: 283 LEKA-LRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYY 341
Query: 225 TILGGYVWRGDIENAKRVFGDIL-DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T++ +E KR+ +++ + +PD TY L+ K G DA+ + E E+
Sbjct: 342 TVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEE 401
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G ++V Y ++++FCK K +A++L+ DM + P +ID C GK+++
Sbjct: 402 KGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDE 461
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIA 402
A ++ +++ + C P+ + +++ LC GK EA+++ + E P+ +TY+ ++
Sbjct: 462 AKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMH 521
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+ +L+EA L +M+EKG PN N+LIQ C+ N + LEE L KGC
Sbjct: 522 GLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAV 581
Query: 463 NKTSFSLLIEGLYESGN 479
N +F+ +I G + G+
Sbjct: 582 NVVNFTSVIYGFCQIGD 598
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 184/381 (48%), Gaps = 42/381 (11%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S T++ L ++++ + V + +N ++P+ T N LI AL K + A+ L E
Sbjct: 339 SYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLRE 398
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
G + V ++ ++ + +I+ AK + D+ +G PD TYT ++DG+ ++G+
Sbjct: 399 AEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGK 458
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A K++ +M +G +PN VTY V++ C KS EAR +++ + + P++
Sbjct: 459 IDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSA 518
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE----- 385
V+ L EGK+ +AC+L + ++ K +P+ + +I LC+ + AKK +E
Sbjct: 519 VMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG 578
Query: 386 -------------------------------FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ P +TY TL + + + L EA
Sbjct: 579 CAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEAS 638
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L M+ KG++P TY +I FC+ G + +++LE+M+ + P KT ++ +IE L
Sbjct: 639 ELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKL 696
Query: 475 YESGNEGE----VGKVVSMAT 491
GN E +GKV+ A+
Sbjct: 697 CYFGNREEAEKLLGKVLRTAS 717
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 178/351 (50%), Gaps = 4/351 (1%)
Query: 144 NVQRSVRSLN-TLLNALVQNKRYDLVHL-MFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
N++ +RSLN L+ A+++++ + + L F + +++ + ++ L K
Sbjct: 154 NLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLC 213
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+GA R+L M G+ + + ++ Y G + NA R+ + G PD +
Sbjct: 214 QGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTA 273
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ +K +L A++ ++ M+ G+EP+ V+Y +I+ +C + +A L+ +M +
Sbjct: 274 IYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGC 333
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLR-KNCMPDNAISSTIIHWLCKEGKIWEAK 380
P V+ LC++ KVE+ L + +++ N +PD +T+I+ L K G +A
Sbjct: 334 PPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDAL 393
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
E E+G + Y+ ++ C++ + +A L DM KG P+V TY +I GF
Sbjct: 394 VFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGF 453
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
C++G E ++L++M GC PN ++++L+ GL +G E ++++++
Sbjct: 454 CRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVS 504
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A+R+L M G+ P+L T + V +E A R + G PD +Y
Sbjct: 248 LRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNC 307
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ GY + R+ DA++++ EM G P++V+Y ++ CK +K E + L+++M+Q
Sbjct: 308 LIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNS 367
Query: 321 -YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P +I L + G +DA + K D S ++ CK I +A
Sbjct: 368 NLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKA 427
Query: 380 KKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K L D + +G P ++TY +I G C ++ EA ++ M + G +PN TY +L+ G
Sbjct: 428 KSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNG 487
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
C G + E ++ + PN ++S ++ GL G E
Sbjct: 488 LCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+PN N+LI++LC+ +V GA + L+E G N+V T+++ G+ GD++ A
Sbjct: 545 LPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALS 604
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D+ PDA TYT L D K RL +A +++ +M G++P VTY +I FC
Sbjct: 605 MLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFC 664
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ + + LL+ M+ R+ P + +VI+ LC G E+A +L ++LR D
Sbjct: 665 QWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAK 722
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+I +G A K+ + F R IP L + + EA L
Sbjct: 723 TCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRF 782
Query: 421 VEKGVE 426
VE+G++
Sbjct: 783 VERGIQ 788
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 141/313 (45%), Gaps = 10/313 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y +++ + + D +SL+ ++ NP++ + +I + G+ + A K
Sbjct: 411 YSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVT----YTAIIDGFCRVGKIDEAKKML 466
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ K + + + LLN L N + M S + PN T + ++ L +
Sbjct: 467 QQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHW-WTPNAITYSAVMHGLRR 525
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A + EM G +PN V ++ ++ AK+ + L +G +
Sbjct: 526 EGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVN 585
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T ++ G+ ++G L A+ ++++M + P+ +TY + +A K + EA L+ ML
Sbjct: 586 FTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKML 645
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P+ VI C+ G+V+D +L ++++ + P + + +I LC G
Sbjct: 646 GKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKLCYFGNRE 703
Query: 378 EAKKLFDEFERGS 390
EA+KL + R +
Sbjct: 704 EAEKLLGKVLRTA 716
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 225/449 (50%), Gaps = 14/449 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F H+ +T+ II L RA + +L ++ N ++ E+LF+ +I +YG AG + A
Sbjct: 150 FQHDRETHFKIIEILGRASKLNHARCILLDMP-NKGVQWDEDLFVVLIESYGKAGIVQEA 208
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
VK F ++++ V+RSV+S + L +++ RY + F N+ + P T N+++
Sbjct: 209 VKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYF-NAMLNEGIEPIRHTYNVMLW 267
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+E A R ++M S G+ P++VT+ T++ GY +E A++ F ++ + P
Sbjct: 268 GFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAP 327
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+YT ++ GY+ + R DA+++ +EM+ G +PN++TY ++ C +K EAR +L
Sbjct: 328 TVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKIL 387
Query: 314 DDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ R + P +++ +++ C+ G ++ A + K ++R + + +I CK
Sbjct: 388 TEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCK 447
Query: 373 EGKIWEAKKLFDEFERGSI----PSLL-----TYNTLIAGMCESAELTEAGRLWDDMVEK 423
G +A KL + I S L YN +I +C + +A + +++K
Sbjct: 448 AGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKK 507
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G++ V +N LI+G K GN +L+ M +G + S+ LLI+ G +
Sbjct: 508 GIQDEV-AFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADA 566
Query: 484 GKVV-SMATASGSVESDSWNFLLTRIVSD 511
+ SM S +S + ++ + +D
Sbjct: 567 KTALDSMIENGHSPDSALFRSVMESLFAD 595
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 185/451 (41%), Gaps = 63/451 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL------FITVIRNYGLAGRPELA 133
TY+++I+ R + + E TE+K G+N+ + T+I+ Y R + A
Sbjct: 296 TYNTMINGYCRFKMMEEAEQFFTEMK-------GKNIAPTVISYTTMIKGYVSVSRADDA 348
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN--SRHKFKVVPNVFTCNIL 191
++ F ++ + + + +TLL L ++ + +RH ++F L
Sbjct: 349 LRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFM--RL 406
Query: 192 IKALCKKDDVEGAIRVLDEM--------------------------PSMGMVPNLVTHTT 225
+ CK D++ A+ VL M ++ ++ NLV
Sbjct: 407 LSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEI 466
Query: 226 IL----------GGYVW-------RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
IL Y G A F +L +G + D + L+ G+ K
Sbjct: 467 ILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKE 525
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G A +++ M GV + +Y ++I+++ + +A+ LD M++ + P SAL
Sbjct: 526 GNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALF 585
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
V++ L +G+V+ A + +L K + + + I+ L G EA +
Sbjct: 586 RSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMN 645
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ P +N+L++ +CE + T A +L D +E+ +Y ++ G
Sbjct: 646 CNCPP--DFNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNA 703
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
IL ++++KG + +S LI+ L + GN
Sbjct: 704 YAILCKIMEKGGAKDWSSCDDLIKSLNQEGN 734
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 6/272 (2%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N++I+ LC A ++ G + + V ++ G+ G+ + A + +
Sbjct: 482 NLIIQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGR 540
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG DA +Y +L+ Y+ G DA +D M +NG P+ + ++E+ +
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +++ ML + + L K+++ L G E+A L+ NC PD ++++
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPD---FNSLLS 657
Query: 369 WLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC++GK A KL D ER +Y ++ + + + A + ++EKG
Sbjct: 658 VLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKGGAK 717
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ + + LI+ + GN K+ IL M+ G
Sbjct: 718 DWSSCDDLIKSLNQEGNTKQA-DILSRMIKGG 748
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 192/380 (50%), Gaps = 4/380 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I G A+K +I+ + +V +T+++AL + + + +F
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 226
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + +V T + LI C + ++ AI +L+EM + PN+ T+ ++ G +
Sbjct: 227 VK-GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ AK V +L PD TY+ LMDGY + + A V + M GV P+ TY ++
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK K EA NL +M Q+ VP +ID LC+ G++ +L +R
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE-MRDRG 404
Query: 357 MPDNAIS-STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P + I+ S++I LCK G + A LF++ + I P++ T+ L+ G+C+ L +A
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ D++ KG NV+TYN++I G CK G +E + +L +M D GC PN +F +I L
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Query: 475 YESGNEGEVGKVVSMATASG 494
++ + K++ A G
Sbjct: 525 FKKDENDKAEKLLRQMIARG 544
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 169/315 (53%), Gaps = 1/315 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV + +I ALCK V A + EM G+ ++VT++T++ G+ G ++ A +
Sbjct: 197 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ + P+ TY +L+D K G++ +A V+ M V+P+ +TY +++ +
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A+++ + M P +I+ C+ V++A L+K + +KN +P
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S++I LCK G+I L DE +RG ++TY++LI G+C++ L A L++ M
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++ + PN+FT+ +L+ G CK G K+ + +++L KG N +++++I G + G
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 482 EVGKVVSMATASGSV 496
E ++S +G +
Sbjct: 497 EALTMLSKMEDNGCI 511
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 182/383 (47%), Gaps = 39/383 (10%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL-VHLMFKNSRHKFKVVPNVFTCNIL 191
AV R+E +Q + +LN L+N + ++ K + + P+ T N L
Sbjct: 78 AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP--PDTVTLNTL 135
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
IK LC K V+ A+ D++ + G N V++ T++ G GD A ++ I R
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT 195
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ Y+ ++D K +++A + EM G+ + VTY +I FC K EA
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD------------ 359
LL++M+ + P+ ++D LC+EGKV++A + +L+ PD
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 360 ------------NAIS-----------STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
NA+S + +I+ CK + EA LF E ++ +P ++
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY++LI G+C+S + L D+M ++G +V TY+ LI G CK G+ I + +M
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 456 LDKGCFPNKTSFSLLIEGLYESG 478
D+ PN +F++L++GL + G
Sbjct: 436 KDQEIRPNIFTFTILLDGLCKGG 458
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 36/332 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + N ++ + K A+ + + G+ P+L+T ++ + G I V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
IL RG+ PD T L+ G G++ A+ D++ G + N+V+Y +I CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A LL + R P+ + +ID LC+ V +A L+ + K D
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG------- 414
ST+I+ C EGK+ EA L +E +I P++ TYN L+ +C+ ++ EA
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 415 ----------------------------RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+++ M GV P+V TY +LI GFCK
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + + +EM K P ++S LI+GL +SG
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 135/256 (52%), Gaps = 1/256 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++++A F +L P + ++D + K+ + AV + +E G++P+ +T
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I FC + ++L +L+R Y P + +I LC +G+V+ A +LL +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
+ +T+I+ +CK G A KL + + R + P++ Y+T+I +C+ ++EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ +M KG+ +V TY+ LI GFC G KE I +L EM+ K PN ++++L++
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 474 LYESGNEGEVGKVVSM 489
L + G E V+++
Sbjct: 279 LCKEGKVKEAKSVLAV 294
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 171/354 (48%), Gaps = 11/354 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N + Y +II L + + L +E+ I + T+I + + G+ + A+
Sbjct: 198 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG-ISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + +V + N L++AL + + ++ +M K V P+V T + L+
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC-----VKPDVITYSTLM 311
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+V+ A V + M MG+ P++ T+T ++ G+ ++ A +F ++ + V
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TY+ L+DG K GR+ ++DEM D G + +TY +I+ CK A L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M ++ P+ ++D LC+ G+++DA E+++ LL K + + +I+ CK
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+G + EA + + E G IP+ T+ T+I + + E +A +L M+ +G+
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 4/222 (1%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A + + ML ++ P K++D + A L RL K PD + +I
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 368 HWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ C G+I + L +RG P +T NTLI G+C ++ +A D ++ +G +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
N +Y LI G CKIG+ + I++L ++ + PN +S +I+ L + E +
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221
Query: 487 VSMATASG-SVESDSWNFLLTR--IVSDLDSGAGALDELLVK 525
S T G S + +++ L+ I L G L+E+++K
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 225/449 (50%), Gaps = 14/449 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F H+ +T+ II L RA + +L ++ N ++ E+LF+ +I +YG AG + A
Sbjct: 150 FQHDRETHFKIIEILGRASKLNHARCILLDMP-NKGVQWDEDLFVVLIESYGKAGIVQEA 208
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
VK F ++++ V+RSV+S + L +++ RY + F N+ + P T N+++
Sbjct: 209 VKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYF-NAMLNEGIEPIRHTYNVMLW 267
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+E A R ++M S G+ P++VT+ T++ GY +E A++ F ++ + P
Sbjct: 268 GFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAP 327
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+YT ++ GY+ + R DA+++ +EM+ G +PN++TY ++ C +K EAR +L
Sbjct: 328 TVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKIL 387
Query: 314 DDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ R + P +++ +++ C+ G ++ A + K ++R + + +I CK
Sbjct: 388 TEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCK 447
Query: 373 EGKIWEAKKLFDEFERGSI----PSLL-----TYNTLIAGMCESAELTEAGRLWDDMVEK 423
G +A KL + I S L YN +I +C + +A + +++K
Sbjct: 448 AGMYDQAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKK 507
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G++ V +N LI+G K GN +L+ M +G + S+ LLI+ G +
Sbjct: 508 GIQDEV-AFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADA 566
Query: 484 GKVV-SMATASGSVESDSWNFLLTRIVSD 511
+ SM S +S + ++ + +D
Sbjct: 567 KTALDSMIENGHSPDSALFRSVMESLFAD 595
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 185/451 (41%), Gaps = 63/451 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL------FITVIRNYGLAGRPELA 133
TY+++I+ R + + E TE+K G+N+ + T+I+ Y R + A
Sbjct: 296 TYNTMINGYCRFKMMEEAEQFFTEMK-------GKNIAPTVISYTTMIKGYVSVSRADDA 348
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN--SRHKFKVVPNVFTCNIL 191
++ F ++ + + + +TLL L ++ + +RH ++F L
Sbjct: 349 LRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFM--RL 406
Query: 192 IKALCKKDDVEGAIRVLDEM--------------------------PSMGMVPNLVTHTT 225
+ CK D++ A+ VL M ++ ++ NLV
Sbjct: 407 LSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEI 466
Query: 226 IL----------GGYVW-------RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
IL Y G A F +L +G + D + L+ G+ K
Sbjct: 467 ILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKE 525
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G A +++ M GV + +Y ++I+++ + +A+ LD M++ + P SAL
Sbjct: 526 GNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALF 585
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
V++ L +G+V+ A + +L K + + + I+ L G EA +
Sbjct: 586 RSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMN 645
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ P +N+L++ +CE + T A +L D +E+ +Y ++ G
Sbjct: 646 CNCPP--DFNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNA 703
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
IL ++++KG + +S LI+ L + GN
Sbjct: 704 YAILCKIMEKGGAKDWSSCDDLIKSLNQEGN 734
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 6/272 (2%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N++I+ LC A ++ G + + V ++ G+ G+ + A + +
Sbjct: 482 NLIIQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGR 540
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG DA +Y +L+ Y+ G DA +D M +NG P+ + ++E+ +
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +++ ML + + L K+++ L G E+A L+ NC PD ++++
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPD---FNSLLS 657
Query: 369 WLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC++GK A KL D ER +Y ++ + + + A + ++EKG
Sbjct: 658 VLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKGGAK 717
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ + + LI+ + GN K+ IL M+ G
Sbjct: 718 DWSSCDDLIKSLNQEGNTKQA-DILSRMIKGG 748
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 225/448 (50%), Gaps = 8/448 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R ++++L L+ F + + + N Y S++ LAR+R F +E +L ++
Sbjct: 69 RIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPT 128
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
E + I VI+ Y +G E A++ + + K + V + N+LLN LV+ R ++ +
Sbjct: 129 REAMSI-VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKL 187
Query: 172 FKN----SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ + V N TC I++K LCK+ +E +++++ G +PN++ + T++
Sbjct: 188 YDEMLEIDGAGDRCVDNYSTC-IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLI 246
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
GY +GD+E A +F ++ +G++P TY +++G+ K G +++ EM G+
Sbjct: 247 DGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLT 306
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
N Y +I+A K +A ++ M++ P +I C +GKV +A +L
Sbjct: 307 VNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQL 366
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGMCE 406
++ L K MP+ + +IH CK+G A L + ERG P L+TY L+ G+
Sbjct: 367 LEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVV 426
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ E+ A + + M+E+GV P+ YN+L+ G CK +L EMLD+ P+
Sbjct: 427 AGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFV 486
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASG 494
++ L++G +GN E K+ + G
Sbjct: 487 YATLVDGFIRNGNLDEARKLFELTIEKG 514
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 166/322 (51%), Gaps = 2/322 (0%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NTL++ + ++ + +F + K +P V T +I CKK D + R+L EM
Sbjct: 243 NTLIDGYCKKGDMEMANGLFIELKLK-GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMN 301
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
S G+ N+ + TI+ G I A +++ G PD TY L+ G + G+++
Sbjct: 302 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 361
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A +++++ G+ PN+ +Y +I A+CK A N L +M +R + P ++
Sbjct: 362 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 421
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSI 391
L G+V+ A + +++L + PD I + ++ LCK+ K+ AK L E ++ +
Sbjct: 422 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVL 481
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P Y TL+ G + L EA +L++ +EKG+ P + YN +I+G+CK G K+ +
Sbjct: 482 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMAC 541
Query: 452 LEEMLDKGCFPNKTSFSLLIEG 473
+ M + P++ ++S +I+G
Sbjct: 542 INRMKKRHLAPDEFTYSTVIDG 563
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 198/418 (47%), Gaps = 9/418 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFK 173
+ T+I Y G E+A F+ ++ +V + ++N + + + LM
Sbjct: 241 FYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM 300
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
NSR + NV N +I A K + A+ ++ M G P++VT+ T++ G
Sbjct: 301 NSR---GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRD 357
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G + A ++ L +G +P+ +YT L+ Y K G A + EM + G +P+ VTY
Sbjct: 358 GKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTY 417
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
G ++ + A + + ML+R P + + ++ LC++ K+ A L +L
Sbjct: 418 GALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD 477
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTE 412
++ +PD + +T++ + G + EA+KLF+ E+G P ++ YN +I G C+ + +
Sbjct: 478 QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKD 537
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A + M ++ + P+ FTY+ +I G+ K + ++ EM+ C PN +++ LI
Sbjct: 538 AMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLIN 597
Query: 473 GLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G G+ K+ A G V + +++ L+ + L A +E+L+ C
Sbjct: 598 GFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKC 655
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 169/353 (47%), Gaps = 16/353 (4%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ L++ LV D V L + + V P+ NIL+ LCKK + A +L E
Sbjct: 416 TYGALVHGLVVAGEVD-VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAE 474
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M ++P+ + T++ G++ G+++ A+++F +++G P Y ++ GY K G
Sbjct: 475 MLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGM 534
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ DA+ ++ M+ + P+E TY +I+ + K A+ + +M++ K P+
Sbjct: 535 MKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTS 594
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
+I+ C +G + + ++++ + +P+ S +I CKE K+ +A F+E
Sbjct: 595 LINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNK 654
Query: 390 SIPSLLTYNTLIAGMCESA--ELTEAGRLWDD------------MVEKGVEPNVFTYNML 435
+P+ +T+N L+ G ++ ++E G + + M+ G P YN +
Sbjct: 655 CVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSI 714
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+ C+ G + +++ +M KGC P+ SF L+ G+ G E +VS
Sbjct: 715 LICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVS 767
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 166/386 (43%), Gaps = 17/386 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y +IH + +D + L E+ + K + ++ +AG ++A+
Sbjct: 378 NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH-KPDLVTYGALVHGLVVAGEVDVALTI 436
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + V N L++ L + + L+ + V+P+ F L+
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ-SVLPDAFVYATLVDGFI 495
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +++ A ++ + GM P +V + ++ GY G +++A + R PD
Sbjct: 496 RNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEF 555
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY+ ++DGY+K L A K+ EM +PN VTY +I FC+ + + +M
Sbjct: 556 TYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREM 615
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG-- 374
VP+ +I C+E K+ DA ++ +L C+P++ + +++ K G
Sbjct: 616 QACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTR 675
Query: 375 KIWEAKKLFDE---------FER----GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
I E F E F R G P YN+++ +C+ A +L + M
Sbjct: 676 AISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMT 735
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKE 447
KG P+ ++ L+ G C G +KE
Sbjct: 736 SKGCIPDSVSFVALLHGVCLEGRSKE 761
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 124/315 (39%), Gaps = 57/315 (18%)
Query: 80 TYHSIIHKLARARAFDAVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y +++ R D L E NP I G N +I+ Y G + A+
Sbjct: 486 VYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI-VGYN---AMIKGYCKFGMMKDAMAC 541
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R++K ++ + +T+++ V+ D MF+ K K PNV T LI C
Sbjct: 542 INRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV-KMKCKPNVVTYTSLINGFC 600
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG--------------------------- 229
+K D+ ++++ EM + G+VPN+VT++ ++G
Sbjct: 601 RKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDV 660
Query: 230 ---YVWRGDIENAKRV-------------------FGDILDRGWVPDATTYTVLMDGYIK 267
Y+ G +N R FG ++ GW P + Y ++ +
Sbjct: 661 TFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQ 720
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G A+++ ++M G P+ V++ ++ C +S E +N++ L + + +
Sbjct: 721 YGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVN 780
Query: 328 CCKVIDLLCEEGKVE 342
++D +G E
Sbjct: 781 YSSILDQYLPQGTSE 795
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 210/448 (46%), Gaps = 78/448 (17%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN---FSHNYDTYHSIIHKLARARA 93
P P+R+ RL S++ Q++ LAL +F + +PN F ++ Y +I KL RA+
Sbjct: 4 PKPKRISSFRLASLLRLQEDPKLALHLFQHPNS-NPNPKPFRYSLLCYDLMITKLGRAKM 62
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
F +E +L + K + E LF +I YG AG P+ A+K F + + QR+++S N
Sbjct: 63 FHEMEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYN 122
Query: 154 TLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
TLLN L+ K +D++ F N RH V P+ T NI+I+ LC V+ A++VLDEM
Sbjct: 123 TLLNVLMICKEFDVMREHFVNIKRH---VKPDGCTFNIMIRGLCSDGRVDDALKVLDEMK 179
Query: 213 SMGMVPNLVTHTTILGG---------------------------YVWR---------GDI 236
+ +VPN VT T++ G YV+ G++
Sbjct: 180 NRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGEL 239
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A R+ ++ G D+ Y+ L+ G K+GR + V+ EME G + + VTY VM
Sbjct: 240 SFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVM 299
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK K A +LD+M++ + P ++ LC++GK +A +L++ + R+ C
Sbjct: 300 INGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGC 359
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD +++Y + G+ ++ E +A +
Sbjct: 360 APD----------------------------------VVSYRIVFDGLSDAMEFKDAAFI 385
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
D+MV KG P + I C+ G+
Sbjct: 386 LDEMVFKGFAPRSSSICKFINRLCQNGD 413
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 38/337 (11%)
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A+++ DEMP + ++ T+L + + + + F +I R PD T+ ++
Sbjct: 100 QNALKMFDEMPLYRCQRTIKSYNTLLNVLMICKEFDVMREHFVNI-KRHVKPDGCTFNIM 158
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-RK 320
+ G GR+ DA+KV+DEM++ + PN+VT+G +I C K EA L D M+
Sbjct: 159 IRGLCSDGRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHG 218
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL---------- 370
P+ + +I LC G++ A L + + R D+AI ST+I L
Sbjct: 219 LCPNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVF 278
Query: 371 -------------------------CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
CK+ A K+ DE E P +++YN ++ +
Sbjct: 279 GVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGEL 338
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ + +EA L++DM +G P+V +Y ++ G K+ IL+EM+ KG P
Sbjct: 339 CKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRS 398
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
+S I L ++G+E V V++ +++++ W
Sbjct: 399 SSICKFINRLCQNGDEDLVWSVLNCLGKINAIDTELW 435
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 44/279 (15%)
Query: 291 VTYGVMIEAFCKGKKSGEARN-LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+ Y +MI + K E LL Q + V L C +I G ++A +++
Sbjct: 48 LCYDLMITKLGRAKMFHEMEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFD 107
Query: 350 RLLRKNCMPDNAISSTIIHWL--CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCES 407
+ C +T+++ L CKE + ++ F +R P T+N +I G+C
Sbjct: 108 EMPLYRCQRTIKSYNTLLNVLMICKEFDVM--REHFVNIKRHVKPDGCTFNIMIRGLCSD 165
Query: 408 AELTEAGRLWDDMVEK------------------------------------GVEPNVFT 431
+ +A ++ D+M + G+ PN +
Sbjct: 166 GRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYV 225
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV-GKVVSMA 490
Y LI+G C +G +R+ EEM G + +S LI GL++ G + EV G ++ M
Sbjct: 226 YATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEME 285
Query: 491 TASGSVESDSWNFLLTRIVSDLD--SGAGALDELLVKNC 527
++ ++N ++ D D + LDE++ C
Sbjct: 286 LKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRC 324
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 179/360 (49%), Gaps = 3/360 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ +F + + N L+++L+ R V +F+ P+V++ N++IK +C+
Sbjct: 203 KASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRV 262
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATT 257
V+ A+ +++ M G P+ VTH I+ G ++ V + G +P+ T
Sbjct: 263 GQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVT 322
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T ++ GY K G+L DA+ V ++M +G+ PN VTY V+I + K G A + M
Sbjct: 323 FTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT 382
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + P +ID C G+++DA +W + + P+ S IIH LCK+ +
Sbjct: 383 RLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSD 442
Query: 378 EAKKLFDEFE-RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA +L +E R I P YN +I +C+ ++ EA + M EKG P+ +TY +L
Sbjct: 443 EAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 502
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G+C E I EM++ GC P+ + + I L ++G EV V+ +A+ S
Sbjct: 503 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLASGGAS 562
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F VI+ G+ + A++ R+ +F + N +++ L + H + + +
Sbjct: 252 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 311
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+PNV T +I CK +E A+ V ++M + G++PN VT+ ++ GY GD+
Sbjct: 312 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 371
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A V+ + PD T++ L+DGY + G+L DA+++ +M + ++PN T+ ++
Sbjct: 372 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 431
Query: 297 IEAFCKGKKSGEARNLLDDM-LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I + CK +S EA LL+++ L+ P + + VID+LC+ GKV++A + K + K
Sbjct: 432 IHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 491
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
C PD + +I C + +I EA F E E G P +T N I+
Sbjct: 492 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 539
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 165/371 (44%), Gaps = 77/371 (20%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-------PSMGMVPNLVTHTT------ 225
+ P+ +C +I LC+ A+++ D+M P + LV+ T
Sbjct: 136 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 195
Query: 226 -----------------------ILGGYVWRGDIENAKRVFGD-ILDRGWVPDATTYTVL 261
++ + RG + + +F I DR + PD ++ V+
Sbjct: 196 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVV 255
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ G ++G++ A+++++ M + G P+ VT+ ++++ C+ + +L LQR
Sbjct: 256 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRR-LQRDG 314
Query: 322 V--PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
V P+ VI C+ GK+EDA ++ ++ MP+ + +I+ K G + A
Sbjct: 315 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 374
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+++ + R P ++T+++LI G C +L +A R+W DM + ++PNV+T++++I
Sbjct: 375 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 434
Query: 439 FCKIGNAKEGIRILEE------------------------------------MLDKGCFP 462
CK + E IR+L E M +KGC P
Sbjct: 435 LCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 494
Query: 463 NKTSFSLLIEG 473
+K ++++LI G
Sbjct: 495 DKYTYTILIIG 505
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 37/296 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ I+ L R +L L+++ F +VI Y AG+ E A+ +
Sbjct: 286 THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVY-- 343
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
N +V + ++PN T N+LI K
Sbjct: 344 -----------------NDMVAS-----------------GIMPNTVTYNVLINGYGKVG 369
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A+ V +M + P++VT ++++ GY G +++A R++ D+ P+ T++
Sbjct: 370 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 429
Query: 260 VLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++ K R +A+++++E+ + P Y +I+ CK K EA + M +
Sbjct: 430 IIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEE 489
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P +I C + ++ +A + ++ C PD+ + I L K G
Sbjct: 490 KGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 545
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRL---------------LRKNCMPDNAISST-- 365
PS+ C ++I +LC G+ DA +L+ ++ L +C N + ++
Sbjct: 140 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 199
Query: 366 -------------------IIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGM 404
++ L G++ + LF+ + +R P + ++N +I G+
Sbjct: 200 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGV 259
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CFPN 463
C ++ +A L + M E G P+ T+N+++ G C+ G +L + G C PN
Sbjct: 260 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 319
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGALD 520
+F+ +I G ++G + V + ASG + + ++N L+ V DL S
Sbjct: 320 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 379
Query: 521 ELLVKNC 527
++ C
Sbjct: 380 QMTRLRC 386
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 2/176 (1%)
Query: 105 KQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+Q ++C ++ F ++I Y G+ + A++ + + + +Q +V + + ++++L +
Sbjct: 379 QQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQ 438
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
R D + + + P F N +I LCK V+ A + M G P+ T
Sbjct: 439 NRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYT 498
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+T ++ GY + I A F ++++ G PD+ T + +K G + VM
Sbjct: 499 YTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 554
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 208/402 (51%), Gaps = 6/402 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKC-GENLFITVIRNYGLAGRPELAVKTFL 138
TY+ +I LAR + L+ ++ + + N IT + G + E A++ +
Sbjct: 282 TYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVE-ALQ--M 338
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+E + ++ + N +++ L+++++ + L F R ++P++ T N ++ CK
Sbjct: 339 EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR-AMGLLPDLITYNSMLNGYCKA 397
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+++ A+ +L ++ G+ P ++T+ T++ GY G +E A+R+ +++++G PD TY
Sbjct: 398 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTY 457
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
T+LM+G K+ L A + DEM G++P+ Y I A + +A L + M+
Sbjct: 458 TILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMML 517
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P + +ID LC+ G ++DA +L +++ PD + +IH C+ G + E
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+KL + G PS++TY LI C L A + M++ G+EPN TYN+LI
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
C+ G EML++G PNK +++LLI+G GN
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGN 679
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 181/387 (46%), Gaps = 22/387 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++IIH L ++ +A + E++ P++ + +++ Y AG + A+
Sbjct: 351 TYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLIT----YNSMLNGYCKAGNLKEALWL 406
Query: 137 FLRIEKFNVQRSVRSLNTL------LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ + + +V + NTL L L + +R K + P+V T I
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR-------LKEEMVEQGCFPDVCTYTI 459
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ K ++ A DEM S G+ P+ + T + + GD A ++ ++ +G
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKG 519
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY V++DG K G L DA + +M +G++P+ +TY +I A C+ EAR
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEAR 579
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL+ M+ PS +I C G + A ++++L P+ + +IH L
Sbjct: 580 KLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 639
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G+ A F E ERG P+ TY LI G C +A RL+ +M + G+ P+
Sbjct: 640 CRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDY 699
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEML 456
T+N L +GF K G+ I LE ++
Sbjct: 700 CTHNALFKGFDK-GHMYHAIEYLENIV 725
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 184/382 (48%), Gaps = 6/382 (1%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
N + V+R+ A R + + + + ++ ++ + NTLL++ ++ R D ++ K
Sbjct: 212 NCVLRVLRD---AARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKE 268
Query: 175 SRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ + N T N++I L ++ +E A +++D M + + T+ ++ + R
Sbjct: 269 METQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLER 327
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ + + ++ + G +P TY ++ G +K ++ A EM G+ P+ +TY
Sbjct: 328 GFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITY 387
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
M+ +CK EA LL D+ + P+ +ID C G +E+A L + ++
Sbjct: 388 NSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVE 447
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTE 412
+ C PD + +++ K + A++ FDE +G P YNT I + +
Sbjct: 448 QGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHK 507
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A +L + M+ KG+ P+ TYN++I G CK GN K+ + +M+ G P+ +++ LI
Sbjct: 508 AFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIH 567
Query: 473 GLYESGNEGEVGKVVSMATASG 494
E G E K+++ + G
Sbjct: 568 AHCERGLLSEARKLLNGMVSDG 589
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 45/305 (14%)
Query: 181 VVPNVFTCNILIKAL---CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
V P+V CN +++ L + DDV R EM + + P +VT+ T
Sbjct: 204 VAPDVRDCNCVLRVLRDAARWDDVRAVYR---EMLQLEIEPTIVTYNT------------ 248
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN--GVEPNEVTYGV 295
L+D ++K GR +A ++ EME G N+VTY V
Sbjct: 249 -----------------------LLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNV 285
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I + A L+D M K SS +I L E G V+ L + +
Sbjct: 286 VISFLAREGHLENAAKLVDSMRLSKKA-SSFTYNPLITALLERGFVQKVEALQMEMENEG 344
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
MP + IIH L K ++ A+ F E G +P L+TYN+++ G C++ L EA
Sbjct: 345 IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEAL 404
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L D+ G+ P V TYN LI G+C++G +E R+ EEM+++GCFP+ ++++L+ G
Sbjct: 405 WLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGS 464
Query: 475 YESGN 479
++ N
Sbjct: 465 HKVRN 469
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 4/240 (1%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD ++ R D V EM +EP VTY ++++F K + EA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 310 RNLLDDMLQRK--YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
LL +M + + + VI L EG +E+A +L + R + + + +I
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLI 321
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + G + + + L E E G +P+L+TYN +I G+ +S ++ A + +M G+
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P++ TYN ++ G+CK GN KE + +L ++ G P +++ LI+G G E ++
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 208/426 (48%), Gaps = 9/426 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++I+ L + + + + E+ +P+ L + RN ++
Sbjct: 257 TYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM 316
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R V + S ++L+ +N D + F++ + +VP+ ILI C
Sbjct: 317 LHR----GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS-GLVPDNVIYTILINGYC 371
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A+ + D+M G ++V + TIL G + + +A +F ++++RG VPD
Sbjct: 372 RNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFC 431
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ G+ K G + A+ + M ++P+ VTY ++I+ FCK + +A L ++M
Sbjct: 432 TFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM 491
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ RK P+ +++ C G V +A LW ++RK P +T+I C+ G +
Sbjct: 492 ISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDL 551
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A + + G P +TYNTLI G + + +A L + M KG++P+V TYN++
Sbjct: 552 SKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVI 611
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ GFC+ G +E IL +M+++G P++++++ LI G N E + G
Sbjct: 612 LNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGF 671
Query: 496 VESDSW 501
V D +
Sbjct: 672 VPDDDF 677
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 200/428 (46%), Gaps = 37/428 (8%)
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
++I ++ R VE + + + + +F +IR+Y A + TF +
Sbjct: 83 QTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILR 142
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+ S+ + N+LL LV+ DL ++ N + + NV+T NI++ ALCK +
Sbjct: 143 RKGFLVSINACNSLLGGLVKMGWVDLAWEVY-NEIARSGIELNVYTLNIMVNALCKDHKI 201
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ L +M G+ ++VT+ T++ Y G + A V + +G P TY +
Sbjct: 202 DDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAV 261
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR-- 319
++G K GR A V +EM G+ P+ TY ++ C+ EA+++ DML R
Sbjct: 262 INGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGV 321
Query: 320 ---------------------------------KYVPSSALCCKVIDLLCEEGKVEDACE 346
VP + + +I+ C G + +A E
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALE 381
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
+ ++L + C D +TI++ LCK+ + +A LFDE ERG +P T+ TLI G C
Sbjct: 382 IRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHC 441
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ + +A L+ M +K ++P++ TYN+LI GFCK ++ + EM+ + FPN
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI 501
Query: 466 SFSLLIEG 473
S+++L+ G
Sbjct: 502 SYAILVNG 509
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 266 IKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
++ RL+DA ++ M +GV E+ +E+ + NL+ D+L R YV +
Sbjct: 74 VRSKRLSDAQTLILRMIRRSGVSRVEI-----VESLISMSSTCGVDNLVFDLLIRSYVQA 128
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
K+ + + +K L RK + ++++ L K G + A ++++
Sbjct: 129 R--------------KLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYN 174
Query: 385 EFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E R I ++ T N ++ +C+ ++ + DM +KG+ ++ TYN LI +C+ G
Sbjct: 175 EIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREG 234
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWN 502
E ++ M KG P +++ +I GL + G V + M + S ++ ++N
Sbjct: 235 LLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYN 294
Query: 503 FLL 505
LL
Sbjct: 295 TLL 297
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 208/399 (52%), Gaps = 3/399 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+SI++ + R+ LL ++++ +K + T+I + G + A+ F
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ SV + N+L+ L + +++ L+ K+ + ++VPNV T N+L+ K+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 312
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + EM + G+ PN++T+ T++ GY + + A + ++ PD T+T
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ GY + R+ D +KV + G+ N VTY ++++ FC+ K A L +M+
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P ++D LC+ GK+E A E+++ L + + +TII +CK GK+ +A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF +G P+++TY +I+G+C+ L+EA L M E G PN TYN LI+
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ G+ +++EEM G + +S ++I+ L +
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 206/388 (53%), Gaps = 3/388 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G LA+ ++E+ NV+ V + +T++++L ++ D +FK K + +V
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVV 264
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N L++ LCK +L +M S +VPN++T +L +V G ++ A ++ ++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG P+ TY LMDGY RL++A ++D M N P+ VT+ +I+ +C K+
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+ + ++ +R V ++ ++ C+ GK++ A EL++ ++ +PD +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LC GK+ +A ++F++ ++ + ++ Y T+I GMC+ ++ +A L+ + KGV
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+PNV TY ++I G CK G+ E +L +M + G PN +++ LI G+ K
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 486 VV-SMATASGSVESDSWNFLLTRIVSDL 512
++ M + S ++ S ++ ++S +
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLSAM 592
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 161/297 (54%), Gaps = 1/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N LIK L + V A+ ++D M G P++VT+ +I+ G GD A +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +R D TY+ ++D + G + A+ + EME G++ + VTY ++ CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K + LL DM+ R+ VP+ ++D+ +EGK+++A EL+K ++ + P+
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ C + ++ EA + D R P ++T+ +LI G C + + +++ ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++G+ N TY++L+QGFC+ G K + +EM+ G P+ ++ +L++GL ++G
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 36/260 (13%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ N+ T ++ + A V G ++ G+ PD TT+ L+ G G++++A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V ++D M +NG +P+ VTY +++
Sbjct: 178 VVLVDRMVENGCQPDVVTYN-----------------------------------SIVNG 202
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
+C G A +L +++ +N D STII LC++G I A LF E E +G S
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN+L+ G+C++ + + L DMV + + PNV T+N+L+ F K G +E + +
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 454 EMLDKGCFPNKTSFSLLIEG 473
EM+ +G PN +++ L++G
Sbjct: 323 EMITRGISPNIITYNTLMDG 342
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 122/297 (41%), Gaps = 52/297 (17%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRN 123
Y S N TY++++ ++L + +N KC ++ F ++I+
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKG 377
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
Y + R + +K F I K + + + + L+ Q+ + L +F+ V+P
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ-EMVSHGVLP 436
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEM-------------------------------- 211
+V T IL+ LC +E A+ + +++
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 212 ---PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
P G+ PN++T+T ++ G +G + A + + + G P+ TY L+ +++
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA-----------FCKGKKSGEARNLLD 314
G LT + K+++EM+ G + + ++I+ +C K S ++LL+
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLE 613
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 378 EAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A LF E R +PSL+ ++ + + + + + G+ N++T N++I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
FC+ +L +++ G P+ T+F+ LI+GL+ G E +V +G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 189/390 (48%), Gaps = 34/390 (8%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L++ IR Y AGR AV F R++ F + + N +++ALV +D H ++
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV------------------ 217
V P++ T I +++ C A+R+L +P G V
Sbjct: 113 L-AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 171
Query: 218 -------------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
PNL +L RGD+ A + G ++ RG + TY + + G
Sbjct: 172 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 231
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ GRL +AV+++D M V P+ VTY +I CK EA + L M+ + +P
Sbjct: 232 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ID C+ V++A EL K + K +PD ++I+ LC EG + A +LF+
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350
Query: 385 EFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E + +G P ++ YN+L+ G+C + A ++ ++M E+G P++ TYN++I G CK+G
Sbjct: 351 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 410
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
N + ++ + + KG P+ +F+ LI+G
Sbjct: 411 NISDATVVMNDAIMKGYLPDVFTFNTLIDG 440
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 193/398 (48%), Gaps = 18/398 (4%)
Query: 115 NLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
NLF I GL AGR AV+ + + V V + NTL+ L + M
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS-------MP 272
Query: 173 KNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ + H + +P+ FT N +I CK V+ A +L + G VP+ VT+ ++
Sbjct: 273 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 332
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G GD+E A +F + +G PD Y L+ G G + A++VM+EM + G
Sbjct: 333 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 392
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ TY ++I CK +A +++D + + Y+P +ID C+ K++ A +
Sbjct: 393 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 452
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
L +R+ PD +++++ LCK GK+ E + F E +G P+ +TYN LI C
Sbjct: 453 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFC 512
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
S ++ EA ++ M ++G+ P+ ++N LI GFC+ G+ + + +++ +KG
Sbjct: 513 RSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATAD 572
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+F+ LI N K+ + G +DS+ +
Sbjct: 573 TFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTY 609
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 167/322 (51%), Gaps = 2/322 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N L + +F ++ K + P++ N L+K LC + + A++V++EM
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 389
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++ T+ ++ G G+I +A V D + +G++PD T+ L+DGY K +L
Sbjct: 390 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 449
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++ M + G+ P+ +TY ++ CK K E +M+ + P+ +I+
Sbjct: 450 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 509
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIP 392
C K+E+A ++ ++ ++ PD +T+I+ C+ G + A LF + E +G
Sbjct: 510 NFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA 569
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ T+NTLI + A +++D+M+ KG + +TY +LI G CK N L
Sbjct: 570 TADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 629
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
EM+ KG P+ ++F +I L
Sbjct: 630 VEMIKKGFIPSMSTFGRVINSL 651
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 184/369 (49%), Gaps = 12/369 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN-----ALVQNKRYDLVHLM 171
+ T+IR P+ A+ R+ + NT+++ ++VQ L +
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 318
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
FK VP+ T LI LC + DVE A+ + +E + G+ P++V + +++ G
Sbjct: 319 FKG------FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 372
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G I +A +V ++ + G PD TY ++++G K+G ++DA VM++ G P+
Sbjct: 373 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 432
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T+ +I+ +CK K A L++ M + P + V++ LC+ GKV + E ++ +
Sbjct: 433 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 492
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
+ K C P+ + +I C+ K+ EA K+ + + G P +++NTLI G C + +L
Sbjct: 493 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 552
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A L+ + EKG T+N LI F N +I +EML KG + ++ +L
Sbjct: 553 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 612
Query: 471 IEGLYESGN 479
I+G ++ N
Sbjct: 613 IDGSCKTAN 621
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I+A + + A+ + M P + I+ V + A +V+ +L G
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD T+T+ + + R A++++ + G V Y ++ + +AR
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQ 173
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI-IHWL 370
L D ML P+ A KV+ LC+ G V +A L +++++ M N + I I L
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG-MSINLFTYNIWIRGL 232
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
C+ G++ EA +L D ++P ++TYNTLI G+C+ + EA M+ +G P+ F
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TYN +I G+CKI +E +L++ + KG P++ ++ LI GL G+ ++ + A
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352
Query: 491 TASG 494
A G
Sbjct: 353 QAKG 356
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 2/347 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++I G E A++ F + ++ + N+L+ L L L N
Sbjct: 329 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLI-LHALQVMNEM 387
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ P++ T NI+I LCK ++ A V+++ G +P++ T T++ GY R +
Sbjct: 388 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 447
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A ++ + + G PD TY +++G K G++ + + EM G PN +TY ++
Sbjct: 448 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 507
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
IE FC+ K EA ++ M Q P + +I C G +E A L+++L K
Sbjct: 508 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 567
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+T+I + + A+K+FDE +G TY LI G C++A + A
Sbjct: 568 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 627
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+M++KG P++ T+ +I + + I+ M+ G P
Sbjct: 628 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y I A+ + + +A + + M P++ ++D L + + A +++ R+L
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
PD + + C + A +L RG++ Y T++ G+
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTH 169
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A +L+D M+ V PN+ +N ++ CK G+ E +L +++ +G N ++++ I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
GL E+G E ++V A + ++N L+
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 263
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 222/470 (47%), Gaps = 43/470 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-AV 97
P + +++ F++ + D A +H S + TY SII L + +A D A+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEM--LDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E L T +K C + +++ Y + +P+ A+
Sbjct: 252 EVLTTMVKNGVMPNC--MTYNSILHGYCSSEQPKEAI----------------------- 286
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
++ R D V P+V T N L+ LCK A ++ D M G+
Sbjct: 287 GFLKKMRSDGVE-------------PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ T+ T+L GY +G + + ++ G PD + +L+ Y K ++ +A+ V
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+M +G+ PN VTYG +I CK +A + M+ P+ + +I LC
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
K + A EL +L + + ++IIH CKEG++ E++KLFD R G P+++T
Sbjct: 454 FDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+TLI G C + ++ EA +L M G++P+ TYN LI G+C++ + + + +EM+
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV 573
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLL 505
G PN +++++++GL+ + ++ T SG+ +E ++N +L
Sbjct: 574 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 201/457 (43%), Gaps = 47/457 (10%)
Query: 85 IHKLARARAFDAVESLLTELKQ-NPEIKCGENLFITVIRNYGL-------AGRPELAVKT 136
I+ L RA A A S + + N + G + YG+ AGR +L
Sbjct: 50 IYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAA 109
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ K + + LL L +KR + + +P+VF+C IL+K LC
Sbjct: 110 LGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLC 169
Query: 197 KKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---- 249
++ + A+ +L M G P++V++TT++ G+ GD + A + ++LDR
Sbjct: 170 DENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP 229
Query: 250 -------------------------------GWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
G +P+ TY ++ GY + +A+ +
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M +GVEP+ VTY +++ CK +S EAR + D M +R P A C ++ +
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
G + + L ++R PD+ + + +I K+ K+ EA +F + + G P+++TY
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+I +C+S + +A ++ M+++G+ PN+ Y LI C + ++ EMLD
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G N F+ +I + G E K+ + G
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 187/411 (45%), Gaps = 3/411 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ A A + +LL + +N I ++F +I Y + + A+ F +
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNG-IHPDHHVFNILICAYAKQEKVDEAMLVFSK 396
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +V + ++ L ++ D L F+ + + PN+ LI +LC D
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE-GLTPNIIVYTSLIHSLCIFD 455
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ EM G+ N + +I+ + G + ++++F ++ G P+ TY+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY G++ +A K++ M G++P+ VTY +I +C+ + +A L +M+
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ L + A EL+ + + + + + I+H LCK EA
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++F + T+N +I + + EA L+ + G+ P+V TY+++ +
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 695
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+ G +E + M + GC N + ++ L + G+ G +SM
Sbjct: 696 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSM 746
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 213/408 (52%), Gaps = 18/408 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++IH L R+ D+ + +E+ + P++ ++ ++++ + AGR A K
Sbjct: 302 TYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVV----IYNSLLKGFCHAGRVGEAWKF 357
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + + R+V S N +L L +K DL L+ K+ + P++ T + +I
Sbjct: 358 WDSMSVSGI-RNVTSYNIMLKGLFDGGMVDKATDLWELLEKDD----SLSPDMVTFSTMI 412
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+K ++++L+E + G + ++++++ G G +++A +++ I +
Sbjct: 413 HGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFK 472
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P++ Y L++G+ + + +DA++V +M +N P +TY +I CK +K EA
Sbjct: 473 PNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRF 532
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ML++ + +I LC + K++ A LW ++L K D + + +IH LC
Sbjct: 533 TREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCS 592
Query: 373 EGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
GK+ EA +L E + + P+++TYNTL+ G E+ +A LW ++E G+ P++
Sbjct: 593 AGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDII 652
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+YN I+G C EG+++L EML G P ++++L+ + + G
Sbjct: 653 SYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 200/386 (51%), Gaps = 10/386 (2%)
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNA 158
+L L+ P E+ + V+ + A P+ A+ F R+ F VRS N LL+A
Sbjct: 72 ILPRLRHRPRFS--ESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDA 129
Query: 159 LVQNKRYDLVHLMFKNSRHKF---KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
V+ +R+ F + H ++ PN+ T NI++++LC + D++ A+ + D + G
Sbjct: 130 FVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRG 189
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P+ +T++T++ G+V ++NA + ++ PDA Y L+ G + G A+
Sbjct: 190 LAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAM 249
Query: 276 KVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+V +++ D G PN TY VM++ CK EA ++ + M+ + P +I
Sbjct: 250 RVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHG 309
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL 394
LC V+ A ++ +++ +PD I ++++ C G++ EA K +D I ++
Sbjct: 310 LCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNV 369
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEK--GVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+YN ++ G+ + + +A LW +++EK + P++ T++ +I G C+ G A + ++IL
Sbjct: 370 TSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQIL 428
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESG 478
EE G ++ S+S +I GL + G
Sbjct: 429 EEARTSGKELDEFSYSSMISGLCKDG 454
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 140/332 (42%), Gaps = 41/332 (12%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
+ S + T+ ++IH L + +L E + + + + E + ++I GR +
Sbjct: 400 SLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGK-ELDEFSYSSMISGLCKDGRLDD 458
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNIL 191
AVK + +I + + + N L+N Q ++ D + + + + + P T N L
Sbjct: 459 AVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND--CSPTTITYNTL 516
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LCK + A R EM G + ++ T+ +++ G I+ A ++ ILD+G
Sbjct: 517 IHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGL 576
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
D + +L+ G G++ +A +++ EM E N PN VTY +++ F
Sbjct: 577 QTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGF---------- 626
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
E G + A LW +L +PD +T I L
Sbjct: 627 -------------------------YETGCFDKAASLWMAILENGLVPDIISYNTRIKGL 661
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLI 401
C + E +L +E G IP+ +T+N L+
Sbjct: 662 CSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+ +TY S+I L R + D +L ++ + ++ + +I AG+ + A +
Sbjct: 544 DVNTYGSLIRGLCRDKKIDGALALWNQI-LDKGLQTDVVMHNILIHGLCSAGKVDEASQL 602
Query: 137 FLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ EK N +V + NTL++ + +D ++ +VP++ + N IK L
Sbjct: 603 LSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILEN-GLVPDIISYNTRIKGL 661
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
C + +++L+EM + G++P +T ++ + G I+
Sbjct: 662 CSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 179/349 (51%), Gaps = 2/349 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLV-HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
S+ N LL+A+ + K++DLV L K P++ T + L+ C + A+
Sbjct: 41 SIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 100
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
++D+M MG P+ +T TT++ G A + ++ RG P+ TY V+++G
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 160
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K G + A ++++ME +E + V + +I++ CK + +A NL +M + P+
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 220
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I LC G+ DA +L ++ K P+ + +I KEGK EA+KL D+
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280
Query: 387 ERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ SI P + TYN+LI G C L +A ++++ MV K P++ TYN LI+GFCK
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++G + EM +G + +++ LI+GL+ G+ KV + G
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 198/411 (48%), Gaps = 7/411 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE--LAVKTF 137
T+ ++IH L +L+ + Q C NL + GL R + LA
Sbjct: 116 TFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDIDLAFNLL 172
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ V NT++++L + + D +FK K + PNV T + LI LC
Sbjct: 173 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCS 231
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++L +M + PNLVT ++ +V G A+++ D++ R PD T
Sbjct: 232 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 291
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++G+ RL A ++ + M P+ TY +I+ FCK K+ + L +M
Sbjct: 292 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 351
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R V + +I L +G ++A +++K+++ PD S ++ LC GK+
Sbjct: 352 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 411
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++FD ++ I + Y T+I GMC++ ++ + L+ + KGV+PNV TYN +I
Sbjct: 412 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G C +E +L++M + G P+ +++ LI G++ +++
Sbjct: 472 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 522
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 205/405 (50%), Gaps = 13/405 (3%)
Query: 81 YHSIIHKLARARAFDAVESL-----LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
++ ++ +A+ + FD V SL + +L P I +L + Y R AV
Sbjct: 45 FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSL----LNGYCHGKRISDAVA 100
Query: 136 TFLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
++ + + + TL++ L + NK + V L+ + + + PN+ T +++
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNG 158
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK+ D++ A +L++M + + ++V TI+ +++A +F ++ +G P+
Sbjct: 159 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 218
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY+ L+ GR +DA +++ +M + + PN VT+ +I+AF K K EA L D
Sbjct: 219 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 278
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
DM++R P +I+ C +++ A ++++ ++ K+C PD +T+I CK
Sbjct: 279 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 338
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
++ + +LF E RG + +TY TLI G+ + A +++ MV GV P++ TY+
Sbjct: 339 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 398
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+L+ G C G ++ + + + M + ++ +IEG+ ++G
Sbjct: 399 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 184/380 (48%), Gaps = 3/380 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++ L + D +LL ++ + +I+ +F T+I + + A+
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 206
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ +V + ++L++ L R+ + + K K+ PN+ T N LI A
Sbjct: 207 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFV 265
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A ++ D+M + P++ T+ +++ G+ ++ AK++F ++ + PD
Sbjct: 266 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 325
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ K R+ D ++ EM G+ + VTY +I+ A+ + M
Sbjct: 326 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 385
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++D LC GK+E A E++ + + D I +T+I +CK GK+
Sbjct: 386 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 445
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ LF +G P+++TYNT+I+G+C L EA L M E G P+ TYN L
Sbjct: 446 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 505
Query: 436 IQGFCKIGNAKEGIRILEEM 455
I+ + G+ ++ EM
Sbjct: 506 IRAHLRDGDKAASAELIREM 525
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 8/340 (2%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESL--LTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY S+I L + R DA + L + E K NP + F +I + G+ A
Sbjct: 218 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT----FNALIDAFVKEGKFVEA 273
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K + K ++ + + N+L+N + R D MF+ K P++ T N LIK
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK-DCFPDLDTYNTLIK 332
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE + EM G+V + VT+TT++ G GD +NA++VF ++ G P
Sbjct: 333 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 392
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY++L+DG G+L A++V D M+ + ++ + Y MIE CK K + +L
Sbjct: 393 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 452
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + P+ +I LC + +++A L K++ +PD+ +T+I ++
Sbjct: 453 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 512
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA 413
G + +L E + L+A M L ++
Sbjct: 513 GDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 552
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 238/520 (45%), Gaps = 55/520 (10%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
D ALQ F + + H+ +T+ II L R + ++ E + E++F
Sbjct: 129 DHALQFFRWVERAGL-IQHDRETHMKIIQILGRYSMLNHARCIVLEDMPKKGFELDEDMF 187
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+ +I +YG AG + +VK F ++++ V+RSV+S N L +V+ RY + F N
Sbjct: 188 VLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKGRYMMAKRFF-NKML 246
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ P T N+LI + A+R ++M G+ P++VT+ T++ GY +E
Sbjct: 247 DEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRME 306
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+++F ++ + P +YT ++ GY + R+ D +++++EM+ G++PN VTY ++
Sbjct: 307 EAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLL 366
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACEL--------- 347
C K EA+++L +M++R+ P +++ K+++ C+ G ++ A ++
Sbjct: 367 PDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSI 426
Query: 348 ------WKRLLRKNCMP---DNAIS-------------------------STIIHWLCKE 373
+ L+ C D A+ + +I +LC
Sbjct: 427 PSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSH 486
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
G+ +A+ LF + + + L +N LI G + A + M KG+ + Y
Sbjct: 487 GQTGKAEILFRQLLKKGVEDPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYR 546
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+LI+ + + G + L+ M++ G P+ + F ++E LYE G +V+
Sbjct: 547 LLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEK 606
Query: 494 GSVESDSWNFLLTRIVSDL------DSGAGALDELLVKNC 527
G E+ L+ +I+ L + G +D L+ C
Sbjct: 607 GVKENMD---LVAKILEALLMRGHEEEALGRIDLLMSSQC 643
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 180/406 (44%), Gaps = 48/406 (11%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +I + L+ R AV+ + ++ + V + NT++N ++KR + +F +
Sbjct: 257 YNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMK 316
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + P V + +IK D + +R+L+EM S+G+ PN VT+TT+L G +
Sbjct: 317 AK-DIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKM 375
Query: 237 ENAKRVFGDILDRGWVP-DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
AK + +++ R P D + + L++ K G L AV V+D M + YGV
Sbjct: 376 TEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGV 435
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYV--PSSALCCK------VIDLLCEEGKVEDACEL 347
+IE FCK ++ +A +D +++ + P S L + VI LC G+ A L
Sbjct: 436 LIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEIL 495
Query: 348 WKRLLRKNC-----------------MPDNAIS-----------------STIIHWLCKE 373
+++LL+K PD+A +I ++
Sbjct: 496 FRQLLKKGVEDPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRK 555
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G+ +AK D E G +P + +++ + E + A R+ MVEKGV+ N+
Sbjct: 556 GEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLV 615
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+++ G+ +E + ++ ++ C N F L+ L E G
Sbjct: 616 AKILEALLMRGHEEEALGRIDLLMSSQCNVN---FDSLLSILSEKG 658
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 140/298 (46%), Gaps = 11/298 (3%)
Query: 190 ILIKALCKKDDVEGAIRVLDEM--------PSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+LI+ CK ++ + A++ +D++ P + + ++ G A+
Sbjct: 435 VLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEI 494
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F +L +G V D + L+ G+ K G A +++ M G+ + Y ++IE++
Sbjct: 495 LFRQLLKKG-VEDPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYL 553
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ + +A+ LD M++ ++P S++ V++ L E+G+V+ A + K ++ K +
Sbjct: 554 RKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMD 613
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ + I+ L G EA D S + +++L++ + E + A +L D +
Sbjct: 614 LVAKILEALLMRGHEEEALGRIDLLM--SSQCNVNFDSLLSILSEKGKTIAALKLLDFGL 671
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++ + + +Y+ ++ G IL ++++KG + S+ LI+ L + GN
Sbjct: 672 QRDCDIDFKSYDKVLDALLAAGKTLNAYSILCKIMEKGGVTSWRSYEDLIKSLNQEGN 729
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 207/396 (52%), Gaps = 3/396 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+SI++ + R+ LL ++++ +K + T+I + G + A+ F
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ SV + N+L+ L + +++ L+ K+ + ++VPNV T N+L+ K+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 312
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + EM + G+ PN++T+ T++ GY + + A + ++ PD T+T
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ GY + R+ D +KV + G+ N VTY ++++ FC+ K A L +M+
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P ++D LC+ GK+E A E+++ L + + +TII +CK GK+ +A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF +G P+++TY +I+G+C+ L+EA L M E G PN TYN LI+
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G+ +++EEM G + +S ++I+ L
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 205/386 (53%), Gaps = 3/386 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G LA+ ++E+ NV+ V + +T++++L ++ D +FK K + +V
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVV 264
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N L++ LCK +L +M S +VPN++T +L +V G ++ A ++ ++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG P+ TY LMDGY RL++A ++D M N P+ VT+ +I+ +C K+
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+ + ++ +R V ++ ++ C+ GK++ A EL++ ++ +PD +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LC GK+ +A ++F++ ++ + ++ Y T+I GMC+ ++ +A L+ + KGV
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+PNV TY ++I G CK G+ E +L +M + G PN +++ LI G+ K
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 486 VV-SMATASGSVESDSWNFLLTRIVS 510
++ M + S ++ S ++ ++S
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++E + ++ +LN ++N + + + + K P+ T N LIK L +
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A+ ++D M G P++VT+ +I+ G GD A + + +R D TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+ ++D + G + A+ + EME G++ + VTY ++ CK K + LL DM+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R+ VP+ ++D+ +EGK+++A EL+K ++ + P+ +T++ C + ++ E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + D R P ++T+ +LI G C + + +++ ++ ++G+ N TY++L+Q
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GFC+ G K + +EM+ G P+ ++ +L++GL ++G
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 183/438 (41%), Gaps = 83/438 (18%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +V+ I R + LAL + N + TY +II L R DA
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKME--ERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGR---PELAVKTFLRIE------KFNV---- 145
SL E+ + IK + +++R AG+ L +K + E FNV
Sbjct: 249 SLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 146 ----------------------QRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKF 179
++ + NTL++ R +++ LM +N
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN----- 362
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K P++ T LIK C V+ ++V + G+V N VT++ ++ G+ G I+ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ +F +++ G +PD TY +L+DG G+L A+++ ++++ + ++ V Y +IE
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CKG GKVEDA L+ L K P+
Sbjct: 483 MCKG-----------------------------------GKVEDAWNLFCSLPCKGVKPN 507
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I LCK+G + EA L + E G+ P+ TYNTLI +LT + +L +
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 419 DMVEKGVEPNVFTYNMLI 436
+M G + + M+I
Sbjct: 568 EMKSCGFSADASSIKMVI 585
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 378 EAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A LF E R +PSL+ ++ + + + + + G+ N++T N++I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
FC+ +L +++ G P+ T+F+ LI+GL+ G E +V +G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 190/382 (49%), Gaps = 10/382 (2%)
Query: 107 NPEIKCGENLFITVIRNYGL-------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
N + G ++ + YG+ AGR +L + K + N LL L
Sbjct: 76 NRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGL 135
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP--SMGMV 217
+KR D + + VPNVF+ I++K LC ++ + A+ +L M G +
Sbjct: 136 CADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL 195
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN+V+++T++ G + GD + A + ++LDR +P+ Y+ ++ K + A++V
Sbjct: 196 PNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEV 255
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
D M NGV PN TY ++ FC + EA L+ M P+ +D LC+
Sbjct: 256 HDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCK 315
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
G+ +A +++ ++++ PD S+++H EG + E LFD + + P
Sbjct: 316 NGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYV 375
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+NTLI + ++ EA ++ M ++G++PN TY+ LI G+CKI + + + +EM+
Sbjct: 376 FNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMV 435
Query: 457 DKGCFPNKTSFSLLIEGLYESG 478
G PN +++++++GL+ +G
Sbjct: 436 SNGVSPNFITYNIMLQGLFRTG 457
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 176/366 (48%), Gaps = 16/366 (4%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-PNV 185
+G E A+ F + + + +RSLN L + ++ V + +R +V P V
Sbjct: 31 SGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTV 90
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T ILI C ++ L + G + +L G ++A D
Sbjct: 91 HTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM----D 146
Query: 246 ILDRGW-----VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG--VEPNEVTYGVMIE 298
I+ RG VP+ ++T+++ G R +A++++ M D+G PN V+Y +I+
Sbjct: 147 IVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVID 206
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
KG +A +ML R+ +P+ + +I LC+ ++ A E+ R+++ P
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ ++++H C G++ EA K ++ G P+++TY++ + +C++ TEA +++
Sbjct: 267 NCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIF 326
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D MV++G++P++ TY+ L+ G+ G E + + M+ P+ F+ LI Y S
Sbjct: 327 DSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLI---YAS 383
Query: 478 GNEGEV 483
+G+V
Sbjct: 384 AKQGKV 389
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 8/293 (2%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW---VPDATT 257
E A+ V DE+ G+ + + L V R + A F + G P T
Sbjct: 34 AEDALDVFDELLRRGIGAPIRSLNGALAD-VARDNPAAAVSRFNRMARAGASMVTPTVHT 92
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL-LDDM 316
Y +L+ GRL + + G + + +++ C K++ +A ++ L M
Sbjct: 93 YGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGM 152
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAISSTIIHWLCKEG 374
+ VP+ ++ LC E + ++A EL + C+P+ ST+I L K G
Sbjct: 153 TELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGG 212
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+A + E +R +P+++ Y+++IA +C+ + +A + D MV+ GV PN FTY
Sbjct: 213 DPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYT 272
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
L+ GFC G E I+ LE+M G PN ++S ++ L ++G E K+
Sbjct: 273 SLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 9/271 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL---VH-LMF 172
+ TVI G P+ A T+ + + +V ++++ AL + + D VH M
Sbjct: 201 YSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMV 260
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
KN V PN FT L+ C + AI+ L++M S G+ PN+VT+++ +
Sbjct: 261 KNG-----VTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCK 315
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G A+++F ++ RG PD TTY+ L+ GY G L + + D M + ++P+
Sbjct: 316 NGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYV 375
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ +I A K K EA + M Q+ P+ +I+ C+ ++E+A L++ ++
Sbjct: 376 FNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMV 435
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
P+ + ++ L + G+ AK+ +
Sbjct: 436 SNGVSPNFITYNIMLQGLFRTGRTATAKEFY 466
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 222/470 (47%), Gaps = 43/470 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-AV 97
P + +++ F++ + D A +H S + TY SII L + +A D A+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEM--LDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E L T +K C + +++ Y + +P+ A+
Sbjct: 252 EVLTTMVKNGVMPNC--MTYNSILHGYCSSEQPKEAI----------------------- 286
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
++ R D V P+V T N L+ LCK A ++ D M G+
Sbjct: 287 GFLKKMRSDGVE-------------PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ T+ T+L GY +G + + ++ G PD + +L+ Y K ++ +A+ V
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+M +G+ PN VTYG +I CK +A + M+ P+ + +I LC
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
K + A EL +L + + ++IIH CKEG++ E++KLFD R G P+++T
Sbjct: 454 FDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+TLI G C + ++ EA +L M G++P+ TYN LI G+C++ + + + +EM+
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV 573
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLL 505
G PN +++++++GL+ + ++ T SG+ +E ++N +L
Sbjct: 574 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 201/457 (43%), Gaps = 47/457 (10%)
Query: 85 IHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGL-------AGRPELAVKT 136
I+ L RA A A S + + N + G + YG+ AGR +L
Sbjct: 50 IYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAA 109
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ K + + LL L +KR + + +P+VF+C IL+K LC
Sbjct: 110 LGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLC 169
Query: 197 KKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---- 249
++ + A+ +L M G P++V++TT++ G+ GD + A + ++LDR
Sbjct: 170 DENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP 229
Query: 250 -------------------------------GWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
G +P+ TY ++ GY + +A+ +
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M +GVEP+ VTY +++ CK +S EAR + D M +R P A C ++ +
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
G + + L ++R PD+ + + +I K+ K+ EA +F + + G P+++TY
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+I +C+S + +A ++ M+++G+ PN+ Y LI C + ++ EMLD
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G N F+ +I + G E K+ + G
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 184/411 (44%), Gaps = 3/411 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ A A + +LL + +N I ++F +I Y + + A+ F +
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNG-IHPDHHVFNILICAYAKQEKVDEAMLVFSK 396
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +V + ++ L ++ D L F+ + + PN+ LI +LC D
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE-GLTPNIIVYTSLIHSLCIFD 455
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ EM G+ N + +I+ + G + ++++F ++ G P+ TY+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY G++ +A K++ M G++P+ VTY +I +C+ + +A L +M+
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ ++ L + A EL+ + + + + + I+H LCK EA
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++F + T+N +I + + EA L+ G+ PN +TY ++ +
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G +E ++ M D GC + + ++ L + G G +SM
Sbjct: 696 IIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 746
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 2/300 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I + CK+ V + ++ D M +G+ PN++T++T++ GY G ++ A ++
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ G PD TY L++GY ++ R+ DA+ + EM +GV PN +TY ++++
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+++ A+ L + + + ++ LC+ ++A +++ L + +
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I L K G+ EAK LF F G +P+ TY + + L E +L+ M +
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMED 714
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G + N +++ + G L M+D+ F + S + L L G E
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQE 773
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 8/228 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
TY+++I+ R D +L E+ + N+ I GL R A + +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSS---GVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALC 196
+ I K Q + + N +L+ L +N D MF+N ++ F NI+I AL
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF--NIMIGALL 662
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A + S G+VPN T+ + + +G +E ++F + D G D+
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSG 722
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
++ ++ G +T A + +++ T + I+ GK
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGK 770
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 214/454 (47%), Gaps = 14/454 (3%)
Query: 75 SHNYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFITV---IRNYGLAGRP 130
+ N TY ++ L AR R DA+ ++L ++ + +T+ R G G
Sbjct: 108 APNAYTYFPLVRALCARGRIADAL-AVLDDMARRGCAPTPPMYHVTLEAACRASGFRG-- 164
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
AV + V + N +L A+ D + ++ F P+V + N
Sbjct: 165 --AVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNA 222
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+++ LC +++EM + G PN+VT +T++G G E V + + G
Sbjct: 223 VLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHG 282
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD Y ++DG K RL A +++ M G+ PN V Y +++ C + EA
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAE 342
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL +M + ++D LC+ G V+ E+ +++L CMPD +T+I+
Sbjct: 343 GLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CKEG I EA L G P+ ++Y ++ G+C + +A L M+++G PN
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNP 462
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
T+N LI CK G ++ I +L++ML GC P+ S+S +I+GL ++GN E +++++
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522
Query: 490 ATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
G S N ++ ++ SG G +++++
Sbjct: 523 MVKKGM----SPNTIIYSSIASALSGEGRINKVI 552
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 212/430 (49%), Gaps = 9/430 (2%)
Query: 72 PNFSHNYD--TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLA 127
P+F D +Y++++ L AR + V+ L+ E+ C N+ F T+I +
Sbjct: 209 PSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVA---AGCPPNIVTFSTLIGHLCRN 265
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G E + ++ + VR T+++ + + +R ++ + N + + PNV
Sbjct: 266 GLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGIL-NRMPSYGLSPNVVC 324
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N L+K LC D E A +L EM + VT ++ G ++ V +L
Sbjct: 325 YNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQML 384
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ G +PD TYT +++G+ K G + +AV ++ M G PN V+Y ++++ C ++
Sbjct: 385 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWV 444
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A L+ M+Q+ P+ +I+ LC++G VE A EL K++L C PD ST+I
Sbjct: 445 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 504
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L K G EA +L + ++G P+ + Y+++ + + + + ++++++ + V
Sbjct: 505 DGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVR 564
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ YN +I CK G I L M+ GC PN++++++LI GL G E ++
Sbjct: 565 SDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEI 624
Query: 487 VSMATASGSV 496
++ + G++
Sbjct: 625 LTELCSKGAL 634
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 159/333 (47%), Gaps = 3/333 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T L++ALC + + A+ VLD+M G P + L A
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM-DEMEDNGVEPNEVTYGVMIEA 299
V D+ RG D +++ G + +AV+++ D + G EP+ V+Y ++
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C ++ G ++L+++M+ P+ +I LC G E E+ ++ C PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +TII +CKE ++ A+ + + G P+++ YNTL+ G+C + EA L
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M +K + T+N+L+ C+ G I +LE+ML+ GC P+ +++ +I G + G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406
Query: 479 NEGEVGKVV-SMATASGSVESDSWNFLLTRIVS 510
E ++ SMA + S+ +L + S
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCS 439
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 207/453 (45%), Gaps = 37/453 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++++ R +LL +K++ I + + T++ + G + A K
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVES 303
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +R+ N L L Q + D + +P+V T N L+ A K
Sbjct: 304 MTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWR 363
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+R+L+EM G+ P LVTH ++ G +E A I + G PD TY
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYN 423
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVE-------------------------------- 287
L+D Y K G + A +MDEM G++
Sbjct: 424 TLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483
Query: 288 ---PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
P+EV+YG ++ A+ K A L D M++RK +PS + +I LC ++++A
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAG 403
+ + K +PD + IIH CKEG + A + ++ S P ++T NTL+ G
Sbjct: 544 IDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNG 603
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C +L +A +L++ VEKG + +V TYN LIQ CK+G+ + ++M KG P+
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++++++ L E+G E ++ SG +
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKL 696
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 192/424 (45%), Gaps = 74/424 (17%)
Query: 130 PELAVKTFLRIEKFN-VQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFT 187
P LA + + + V+ S+++ N +L+AL ++ L S + ++ PN +T
Sbjct: 151 PHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYT 210
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD------------ 235
N+L+ C K + A+ L M G+ P+ VT+ T+L + +G
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 236 -----------------------IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
I+ A +V + G+ PD TY VL G + G++
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330
Query: 273 DAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A ++ DEME G P+ VTY +++A K + S +A LL++M + P+ V
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF----- 386
+ LC+EGK+E+A +++ + PD +T+I CK G + +A L DE
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450
Query: 387 -------------------------------ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+RG +P ++Y T++A + A R
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
LWD M+E+ + P++ TYN LI+G C++ KE I L E ++KG P++T+++++I
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYC 570
Query: 476 ESGN 479
+ G+
Sbjct: 571 KEGD 574
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 180/396 (45%), Gaps = 46/396 (11%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNS 175
V+++ G+ E A+ +I + + V + NTL++A + K + L+ M
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
K+ + FT N ++ LCK E A +L P G VP+ V++ T++ Y +
Sbjct: 450 ---LKM--DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E A R++ +++R +P +TY L+ G ++ RL +A+ ++E + G+ P+E TY +
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I A+CK A + M++ + P C +++ LC GK++ A +L++ + K
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
D +T+I +CK G + A FD+ E +G P TYN +++ + E+ EA
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684
Query: 415 RLWDDMVEKGVEPNVF------------------------------------TYNMLIQG 438
+ + + G F TY + G
Sbjct: 685 NMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNG 744
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
C G KE +L+EM+ KG + +++ L+EGL
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K++P++ T N LIK LC+ + ++ AI L+E G+VP+ T+ I+ Y GD+ENA
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
R +++ + PD T LM+G G+L A+K+ + + G + + +TY +I++
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK A + DDM + P + V+ L E G+ E+A + +L +
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ 698
Query: 360 NAISSTIIHWLCKEGKI--WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ + E + E K + E+ +L TY + G+C +L EA +
Sbjct: 699 SFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVL 758
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCK 441
D+M++KG+ + TY L++G K
Sbjct: 759 DEMMQKGMPVDCSTYITLMEGLIK 782
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKV--EDA 344
P + A+ + + A LL + +R+ V PS V+ L + +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
++++ L+ P++ + ++H C +G + +A + G P +TYNTL+
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C L EA L M G+ P TYN L+ F ++G K+ +++E M G P+
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312
Query: 464 KTSFSLLIEGLYESGNEGEVGKV 486
++++L GL ++G E ++
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRL 335
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 45/313 (14%)
Query: 32 TPPIKPW-PQRLYPKRLVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKL 88
+PP + + P + +++ F++ N + AL+++ K P+ S TY+++I L
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS----TYNTLIKGL 534
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
R L E + + E + +I Y G E A + ++ + + +
Sbjct: 535 CRMERLKEAIDKLNEFVEKGLVP-DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V + NTL+N L + + D +F++ K K V +V T N LI+++CK DV+ A+
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV-DVITYNTLIQSMCKVGDVDTALHFF 652
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV---------------- 252
D+M G+ P+ T+ +L G E A + + D G +
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE 712
Query: 253 ---------PDAT-----------TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
P+A TY ++G G+L +A V+DEM G+ + T
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCST 772
Query: 293 YGVMIEAFCKGKK 305
Y ++E K +K
Sbjct: 773 YITLMEGLIKRQK 785
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+ T+N L+ C L +A M G+ P+ TYN L+ C+ G E +
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIV 509
L M G P + +++ L+ G + KVV TA G E D ++N L +
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG-FEPDLRTYNVLAMGLC 324
Query: 510 SDLDSGAGALDE 521
AG +DE
Sbjct: 325 Q-----AGKVDE 331
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRL--WDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
RG PSL N +++ + S L + ++E + PN +T+N+L+ C G
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFL 504
+ + L M G P+ +++ L+ G GE +++ G + ++N L
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 505 LT 506
++
Sbjct: 285 VS 286
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 210/440 (47%), Gaps = 57/440 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++ ++ D ++ LL E+ E + L V N +AG LA K +L
Sbjct: 233 TYNTLLDSFSKEGRKDKIDMLLKEM----EARGSSCLPNDVTYNVVIAG---LARKGYLE 285
Query: 140 IE-------KFNVQRSVRSLNTLLNALVQN---KRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ + + S + N L+ L+ K+ D + L +N ++P V T N
Sbjct: 286 EAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENE----GIMPTVVTYN 341
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+I L + +E A EM +MG++P+++T+ ++L GY G+ + A +FGD+
Sbjct: 342 AMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRA 401
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P TY +L+DGY +LG L +A ++ +EM + G P+ TY ++++
Sbjct: 402 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMT 461
Query: 310 RNLLDDMLQRKYVP-----SSALCCKV------------------------------IDL 334
R D+ML + P ++ +C ++ ID
Sbjct: 462 REFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDG 521
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPS 393
LC+ G ++DA EL +++ PD + +IH C+ G + EA+K F D G PS
Sbjct: 522 LCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPS 581
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+TY +I C L A + M+E+GVEPN TYN+LI C++G + R
Sbjct: 582 AVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFY 641
Query: 454 EMLDKGCFPNKTSFSLLIEG 473
EML++G PNK +++LLI+G
Sbjct: 642 EMLERGLVPNKYTYTLLIDG 661
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 170/342 (49%), Gaps = 9/342 (2%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCKKDD 200
+ ++ S+ + NTLL++ + R D + ++ K + +PN T N++I L +K
Sbjct: 224 QLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGY 283
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +++EM + + T+ ++ G + RG ++ + ++ + G +P TY
Sbjct: 284 LEEAAELVEEM-RLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNA 342
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G ++ G++ A EM G+ P+ +TY ++ +CK EA L D+ +
Sbjct: 343 MIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAG 402
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII---HWLCKEGKIW 377
P+ +ID C G +E+A L + ++ + C+PD + ++ H +C +
Sbjct: 403 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCS---LA 459
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
++ FDE +G P YNT I +++++ +L + ++ +G+ + TYN+LI
Sbjct: 460 MTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILI 519
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G CK GN K+ ++ +M+ G P+ +++ LI E G
Sbjct: 520 DGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERG 561
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 167/375 (44%), Gaps = 6/375 (1%)
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
L + F + V V+ N +L L R+D + + + + P++ T N L
Sbjct: 179 LCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEML-QLGIEPSIVTYNTL 237
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGM--VPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+ + K+ + +L EM + G +PN VT+ ++ G +G + +
Sbjct: 238 LDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKG-YLEEAAELVEEMRL 296
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
+ TY L+ G + G + + EME+ G+ P VTY MI + + A
Sbjct: 297 SKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAA 356
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+ +M +P +++ C+ G ++A L+ L R P + +I
Sbjct: 357 QAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDG 416
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
C+ G + EA++L +E E+G +P + TY L+ G L +D+M+ KG+ P+
Sbjct: 417 YCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPD 476
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
F YN I +G+ + ++ E ++ +G + ++++LI+GL ++GN + +++
Sbjct: 477 CFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELM- 535
Query: 489 MATASGSVESDSWNF 503
M S ++ D +
Sbjct: 536 MQMISNGLQPDCITY 550
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 189/390 (48%), Gaps = 34/390 (8%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L++ IR Y AGR AV F R++ F + + N +++ALV +D H ++
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV------------------ 217
V P++ T I +++ C A+R+L +P G V
Sbjct: 112 L-AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 170
Query: 218 -------------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
PNL +L RGD+ A + G ++ RG + TY + + G
Sbjct: 171 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 230
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ GRL +AV+++D M V P+ VTY +I CK EA + L M+ + +P
Sbjct: 231 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ID C+ V++A EL K + K +PD ++I+ LC EG + A +LF+
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349
Query: 385 EFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E + +G P ++ YN+L+ G+C + A ++ ++M E+G P++ TYN++I G CK+G
Sbjct: 350 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG 409
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
N + ++ + + KG P+ +F+ LI+G
Sbjct: 410 NISDATVVMNDAIMKGYLPDVFTFNTLIDG 439
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 193/398 (48%), Gaps = 18/398 (4%)
Query: 115 NLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
NLF I GL AGR AV+ + + V V + NTL+ L + M
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS-------MP 271
Query: 173 KNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ + H + +P+ FT N +I CK V+ A +L + G VP+ VT+ ++
Sbjct: 272 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 331
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G GD+E A +F + +G PD Y L+ G G + A++VM+EM + G
Sbjct: 332 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 391
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ TY ++I CK +A +++D + + Y+P +ID C+ K++ A +
Sbjct: 392 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 451
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
L +R+ PD +++++ LCK GK+ E + F E +G P+ +TYN LI C
Sbjct: 452 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFC 511
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
S ++ EA ++ M ++G+ P+ ++N LI GFC+ G+ + + +++ +KG
Sbjct: 512 RSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATAD 571
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+F+ LI N K+ + G +DS+ +
Sbjct: 572 TFNTLIGAFSGKLNMHMAEKIFDEMLSKGH-RADSYTY 608
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 167/322 (51%), Gaps = 2/322 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N L + +F ++ K + P++ N L+K LC + + A++V++EM
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 388
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++ T+ ++ G G+I +A V D + +G++PD T+ L+DGY K +L
Sbjct: 389 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 448
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++ M + G+ P+ +TY ++ CK K E +M+ + P+ +I+
Sbjct: 449 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 508
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIP 392
C K+E+A ++ ++ ++ PD +T+I+ C+ G + A LF + E +G
Sbjct: 509 NFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA 568
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ T+NTLI + A +++D+M+ KG + +TY +LI G CK N L
Sbjct: 569 TADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHL 628
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
EM+ KG P+ ++F +I L
Sbjct: 629 VEMIKKGFIPSMSTFGRVINSL 650
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 184/369 (49%), Gaps = 12/369 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN-----ALVQNKRYDLVHLM 171
+ T+IR P+ A+ R+ + NT+++ ++VQ L +
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 317
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
FK VP+ T LI LC + DVE A+ + +E + G+ P++V + +++ G
Sbjct: 318 FKG------FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 371
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G I +A +V ++ + G PD TY ++++G K+G ++DA VM++ G P+
Sbjct: 372 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 431
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T+ +I+ +CK K A L++ M + P + V++ LC+ GKV + E ++ +
Sbjct: 432 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 491
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
+ K C P+ + +I C+ K+ EA K+ + + G P +++NTLI G C + +L
Sbjct: 492 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 551
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A L+ + EKG T+N LI F N +I +EML KG + ++ +L
Sbjct: 552 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 611
Query: 471 IEGLYESGN 479
I+G ++ N
Sbjct: 612 IDGSCKTAN 620
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 6/304 (1%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I+A + + A+ + M P + I+ V + A +V+ +L G
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD T+T+ + + R A++++ + G V Y ++ + +AR
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQ 172
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI-IHWL 370
L D ML P+ A KV+ LC+ G V +A L +++++ M N + I I L
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG-MSINLFTYNIWIRGL 231
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
C+ G++ EA +L D ++P ++TYNTLI G+C+ + EA M+ +G P+ F
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TYN +I G+CKI +E +L++ + KG P++ ++ LI GL G+ ++ + A
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351
Query: 491 TASG 494
A G
Sbjct: 352 QAKG 355
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 2/347 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++I G E A++ F + ++ + N+L+ L L L N
Sbjct: 328 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLI-LHALQVMNEM 386
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ P++ T NI+I LCK ++ A V+++ G +P++ T T++ GY R +
Sbjct: 387 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 446
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A ++ + + G PD TY +++G K G++ + + EM G PN +TY ++
Sbjct: 447 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 506
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
IE FC+ K EA ++ M Q P + +I C G +E A L+++L K
Sbjct: 507 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 566
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+T+I + + A+K+FDE +G TY LI G C++A + A
Sbjct: 567 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 626
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+M++KG P++ T+ +I + + I+ M+ G P
Sbjct: 627 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y I A+ + + +A + + M P++ ++D L + + A +++ R+L
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
PD + + C + A +L RG++ Y T++ G+
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTH 168
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A +L+D M+ V PN+ +N ++ CK G+ E +L +++ +G N ++++ I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
GL E+G E ++V A + ++N L+
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 262
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 228/449 (50%), Gaps = 10/449 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
TY ++I + R FD + +L E++ E CG N + GL +G E A
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMR---ERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 175
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+E + + + L+N L +++R + + + ++ PNV LI +
Sbjct: 176 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL-DEMSCAELKPNVVVYANLIDGFMR 234
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + + A +++ EM + G+ PN +T+ ++ G G ++ A + ++ PD T
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++++G+ + DA +++ EME+ G+ PN TY +MI C+ + +A +LL++M
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 354
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P++ + +I C EG V ACE++ ++ + N +PD +++I L K G++
Sbjct: 355 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 414
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E+ K F + ERG +P+ TY+ LI G ++ +L A +L M++ G++PN Y L+
Sbjct: 415 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 474
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ + K + ++ + MLD+G + + +LI L SGN +V+S +GSV
Sbjct: 475 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSV 534
Query: 497 -ESDSWNFLLTRI--VSDLDSGAGALDEL 522
+ ++ L++ + +D + G LDE+
Sbjct: 535 PDVHVYSSLISGLCKTADREKAFGILDEM 563
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 11/368 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD---LVHLMF 172
L I +IR Y P + + + R + RS L+ L++ ++ R V LM
Sbjct: 17 LLIKMIRAYP---SPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMM 73
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
++ + P++ CN L+K L + D + +V + M G+ P++ T++T++ Y
Sbjct: 74 RDR----GLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCK 129
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+ + AK+V ++ +RG + TY VL+ G + G + +A +MED G+ P+ T
Sbjct: 130 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 189
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
YG +I CK ++S EA+ LLD+M + P+ + +ID EG ++A ++ K ++
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
P+ ++ LCK G++ A L + R S P +TYN +I G
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A RL +M G+ PNV+TY+++I G C+ G ++ +LEEM KG PN ++ LI
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369
Query: 472 EGLYESGN 479
G GN
Sbjct: 370 SGYCREGN 377
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 222/478 (46%), Gaps = 7/478 (1%)
Query: 52 FRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
FR N A ++ + + S N TY +IH L ++ + LL E+ +K
Sbjct: 303 FRHHNKKDAFRLL--SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG-LK 359
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
++ +I Y G LA + F ++ K NV + N+L+ L + R +
Sbjct: 360 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 419
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F + + ++PN FT + LI K D+E A +++ M G+ PN V + +L Y
Sbjct: 420 FAQMQER-GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
DIE F +LD+G + D Y +L+ G + A +V+ E+E NG P+
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y +I CK +A +LD+M ++ P+ +ID LC+ G + A ++ +
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAEL 410
L K +P+ +++I CK G I A L++E G P Y+ L G + +L
Sbjct: 599 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 658
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A L ++M +G ++ ++N L+ GFCK G +E +++L ++ +G PN + +
Sbjct: 659 EQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 717
Query: 471 IEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
I GL E+G EV + V + + + ++ L +++ +D+++ +C
Sbjct: 718 ISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHC 775
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 187/379 (49%), Gaps = 6/379 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++ Y +GR + A + L + + S+R N LL L+ R D + L++K
Sbjct: 52 VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL---RADAMALLWKVREFM 108
Query: 179 F--KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ P+V+T + LI+A CK + + A +VL EM G N VT+ ++ G G +
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E A D+ D G VPD TY L++G K R +A ++DEM ++PN V Y +
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ F + + EA ++ +M+ P+ ++ LC+ G+++ A L K+++R +
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
PD + II + +A +L E E I P++ TY+ +I G+C+S E +A
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L ++M KG++PN F Y LI G+C+ GN I ++M P+ ++ LI GL
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408
Query: 476 ESGNEGEVGKVVSMATASG 494
+ G E K + G
Sbjct: 409 KVGRVEESTKYFAQMQERG 427
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 223/474 (47%), Gaps = 17/474 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + L+ R+ N D A ++ A PN TY +++ L + D
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN----KITYDNLVRGLCKMGQMDR 275
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
LL ++ ++ + + +I + + A + +E + +V + + ++
Sbjct: 276 ASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMI 334
Query: 157 NALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+ L Q+ K DL+ M + PN F LI C++ +V A + D+M
Sbjct: 335 HGLCQSGEPEKASDLLEEMTTKG-----LKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ ++P+L + +++ G G +E + + F + +RG +P+ TY+ L+ GY+K G L
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A +++ M D G++PN+V Y ++E++ K + + ML + + + + +I
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
L G +E A + + + +PD + S++I LCK +A + DE ++G
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 569
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++ YN LI G+C+S +++ A +++ ++ KG+ PN TY LI G CK+G+ +
Sbjct: 570 PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYL 629
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
EML G P+ +S+L G +G+ + ++ G S+N L+
Sbjct: 630 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV 683
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 182/403 (45%), Gaps = 24/403 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +IH + ++ E L+ + + +K + ++I ++ +Y + E T
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRM-LDTGLKPNDVIYIDLLESYFKSDDIEKVSST 489
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V R L++ L + + + + K VP+V + LI LC
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL-SEIEKNGSVPDVHVYSSLISGLC 548
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K D E A +LDEM G+ PN+V + ++ G GDI A+ VF IL +G VP+
Sbjct: 549 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 608
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+DG K+G +++A + +EM G+ P+ Y V+ +A L+++M
Sbjct: 609 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R + S+ ++D C+ GK+++ +L ++ + +P+ II L + GK+
Sbjct: 669 FLRGHASISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 727
Query: 377 WEAKKLFDEFER--------------------GSIPSLLTYNTLIAGMCESAELTEAGRL 416
E +F E ++ G IP L + +I C+ L +A L
Sbjct: 728 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALML 786
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
D +V K +Y ++ C+ G E + +L+EM +G
Sbjct: 787 RDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 135/352 (38%), Gaps = 96/352 (27%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLM 171
++ +I N +G E A + IEK V ++L++ L + K + ++ M
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K V PN+ N LI LCK D+ A V + + + G+VPN VT+T+++ G
Sbjct: 564 SKKG-----VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVL------------------------------ 261
GDI NA ++ ++L G PDA Y+VL
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 678
Query: 262 ----MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR------- 310
+DG+ K G++ + +K++ + G+ PN +T +I + K E
Sbjct: 679 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 738
Query: 311 ------------NLLDDMLQRKYVP------------------------------SSALC 328
+L DM+ + +P S+ +
Sbjct: 739 QKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 798
Query: 329 CK----VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
C ++D LC +GK+ +A L K + ++ + ++ I W + I
Sbjct: 799 CSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHI 850
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK---IWEAK 380
S A+ ++D + G+V+DA E+ + + P + ++ L + +W+ +
Sbjct: 46 SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR 105
Query: 381 KLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ G P + TY+TLI C+ E A ++ +M E+G N TYN+LI G C
Sbjct: 106 EFM--VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ G +E ++M D G P+ ++ LI GL +S E
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 205
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 171/320 (53%), Gaps = 10/320 (3%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A K F I K ++Q +V S NTL+N + D K+ K + P+VFT + LI
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD-EGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
ALCK++ ++GA + DEM G++PN V TT++ G+ G+I+ K + +L +G
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y L++G+ K G L A ++D M G+ P+++TY +I+ FC+G A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 313 LDDMLQR----KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
+M Q V SAL C +C+EG+V DA + +LR PD+ + ++
Sbjct: 438 RKEMDQNGIELDRVGFSALVCG----MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK+G KL E + G +PS++TYN L+ G+C+ ++ A L D M+ GV P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 428 NVFTYNMLIQGFCKIGNAKE 447
+ TYN L++G + N+ +
Sbjct: 554 DDITYNTLLEGHHRHANSSK 573
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 219/529 (41%), Gaps = 66/529 (12%)
Query: 26 LSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKF---HPNFSHNYDTYH 82
S+ T P I+ L +V +I L L + KF P F +TY
Sbjct: 64 FSSFTDCPSIRKVLPSLSVHHVVDLI-NHNPLSLPQRSIFAFFKFISSQPGFRFTVETYF 122
Query: 83 SIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR----------------NYGL 126
+ LA F +SL+ + ++FI+++ Y
Sbjct: 123 VLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTD 182
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNV 185
G A++ F K +R LL+ +++ N + + F + NV
Sbjct: 183 LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPL--NV 240
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV--- 242
+ NIL+ CK+ ++ A +V DE+ + P +V+ T++ GY G+++ R+
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 243 --------------------------------FGDILDRGWVPDATTYTVLMDGYIKLGR 270
F ++ RG +P+ +T L+ G+ + G
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + +M G++P+ V Y ++ FCK ARN++D M++R P
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+ID C G VE A E+ K + + D S ++ +CKEG++ +A++ E R
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 391 I-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
I P +TY ++ C+ + +L +M G P+V TYN+L+ G CK+G K
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEG-------EVGKVVSMAT 491
+L+ ML+ G P+ +++ L+EG + N E+G V +A+
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLAS 589
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 40/372 (10%)
Query: 172 FKNSR-HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F+ SR H+F V + C L+ + K + E+ G N+ ++ +
Sbjct: 193 FRLSRKHRFDV--PIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF 250
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G+I +A++VF +I R P ++ L++GY K+G L + ++ +ME + P+
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDV 310
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
TY +I A CK K A L D+M +R +P+ + +I G+++ E +++
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI-------- 401
+L K PD + +T+++ CK G + A+ + D RG P +TY TLI
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 402 ---------------------------AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
GMC+ + +A R +M+ G++P+ TY M
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ FCK G+A+ G ++L+EM G P+ ++++L+ GL + G ++ G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 495 SVESD-SWNFLL 505
V D ++N LL
Sbjct: 551 VVPDDITYNTLL 562
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 186/357 (52%), Gaps = 5/357 (1%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF ++ + G A F I + ++ SV S NTL++ ++K + + K+
Sbjct: 228 LFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE-EGFVLKSV 286
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
++ P+VFT + LI LCK+ VE A + DEM MG+VPN VT TT++ G G
Sbjct: 287 MESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGK 346
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I+ A R F + DRG PD TY L++G + G L +A K+++EM NG +P+++T+
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ CK A + D M++ +I LC +G+V DA + K +L
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
PD+ + +I CK+G + KL E +R G +P ++TYN L+ G C+ ++ A
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAK 526
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
L M+ V PN T+N+L+ G CK G++ + +I +KG + S++ L+
Sbjct: 527 MLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFNG--EKGLVSDYASYTALV 580
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 199/412 (48%), Gaps = 14/412 (3%)
Query: 95 DAVESLLTELKQNPEIK-CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
DA++ L K N I CG + + R L +P + +L + + +V N
Sbjct: 173 DAIQCLRLVKKNNFSIPVCGCDYLLR--RVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFN 230
Query: 154 TLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
L++ + ++F SR + P+V + N LI C+ +VE + M
Sbjct: 231 ILMHGFCKIGDVMNARMVFDEISRRGLR--PSVVSFNTLISGYCRSKNVEEGFVLKSVME 288
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
S + P++ T++ ++ G +E A +F ++ + G VP+ T+T L+DG K G++
Sbjct: 289 SERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKID 348
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A++ + M+D G+ P+ +TY +I C+ EAR LL++M+ + P ++
Sbjct: 349 LALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLM 408
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSI 391
D C++G ++ A E+ R++ + D+ + +I LC++G++ +A+++ D G
Sbjct: 409 DGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHK 468
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P TY +I C+ ++ +L +M G P V TYN L+ GFCK G K +
Sbjct: 469 PDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKML 528
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNE-------GEVGKVVSMATASGSV 496
L ML+ PN +F++L++G + G+ GE G V A+ + V
Sbjct: 529 LHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYASYTALV 580
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 144/282 (51%), Gaps = 4/282 (1%)
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
++LD G+ P+ + +LM G+ K+G + +A V DE+ G+ P+ V++ +I +C+ K
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
E L M + P +I+ LC+E +VE+A L+ + +P+ +
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T+I CK GKI A + F+ +RG P L+TYN LI G+C +L EA +L ++M+
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G +P+ T+ L+ G CK G+ + I + M+++G + +F+ LI GL G +
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455
Query: 484 GKVVSMATASGSVESDSWNFLLTRIV---SDLDSGAGALDEL 522
+++ ++G D ++ D+ GA L E+
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 40/226 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I+ L R LL E+ N K + F T++ G + A++ R
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGN-GFKPDKITFTTLMDGCCKDGDMDSALEIKDR 426
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN---SRHKFKVVPNVFTCNILIKALC 196
+ + ++ + L++ L ++ R M K+ + HK P+ T ++I C
Sbjct: 427 MVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHK----PDDPTYTMVIDCFC 482
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV-------------- 242
KK DV+ ++L EM G VP +VT+ ++ G+ +G ++NAK +
Sbjct: 483 KKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDI 542
Query: 243 -FGDILD-----------------RGWVPDATTYTVLMDGYIKLGR 270
F +LD +G V D +YT L++ IK+ +
Sbjct: 543 TFNILLDGHCKHGSSVDFKIFNGEKGLVSDYASYTALVNESIKISK 588
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 211/430 (49%), Gaps = 11/430 (2%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL-TELKQ--NPEIK 111
++ DLA ++F F H+ T ++++ AR + +LL EL P+++
Sbjct: 96 KDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVE 155
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHL 170
N+ IT Y LA PE A +E+ F V S+++ N +L+ L ++ +
Sbjct: 156 TW-NVLIT---GYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F+ R V F+ ILI L K + A + E + G ++ T+T I+
Sbjct: 212 HFEAVRRSMPVSAATFS--ILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
I+ A + I G P TY L++G K+GRL +A+ ++ ++ DNG P+
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I+ K K+S EA L +M R + +I L + GK+ A ++K
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAE 409
+ C+PD ST+I L K G+I A ++F E RG P+ + Y+ LI G+C++ +
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A + M + P+ TYN+LI G CK G+ + +EML+ GC P+ ++++
Sbjct: 450 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 509
Query: 470 LIEGLYESGN 479
LI GL ++GN
Sbjct: 510 LISGLCKAGN 519
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 190/391 (48%), Gaps = 7/391 (1%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+F Q SV + N LL+ + KR+ + KN P+V T N+LI C +
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATI-FRPDVETWNVLITGYCLAREP 170
Query: 202 EGAIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
E A V+ EM G+ P+L TH +L G G + A F + + R A T+++
Sbjct: 171 EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSI 229
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L++G +K G + A + E NG + TY ++ K KK EA L++ +
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P+ A +++ LC+ G++E+A +L ++++ C PD +++I L KE + +EA
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 349
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
KLF E RG + Y LI G+ ++ ++ +A ++ M G P+V T + +I G
Sbjct: 350 KLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 409
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVES 498
K G +RI + M +G PN+ +S LI GL ++ + + + M A + ++
Sbjct: 410 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469
Query: 499 DSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
++N L+ + D+++ DE+L C
Sbjct: 470 ITYNILIDGLCKSGDVEAARAFFDEMLEAGC 500
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 186/413 (45%), Gaps = 24/413 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-TVIRNYGLAGRPEL--AVKT 136
T+ +I+ L +A SL E N C ++ T I N+ LA ++ AV
Sbjct: 226 TFSILINGLVKAGMMIQAHSLAQETTTN---GCTIDIHTYTAIVNW-LAKNKKIQEAVAL 281
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
+I ++ + N LLN L + R DL+ + N P+V T LI
Sbjct: 282 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-----CTPDVVTYTSLI 336
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
L K+ A ++ EM S G+ + V +T ++ G + G I A V+ + G V
Sbjct: 337 DGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCV 396
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD T + ++DG K GR+ AV++ ME G+ PNEV Y +I CK +K A +
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 456
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M + P + +ID LC+ G VE A + +L C PD + +I LCK
Sbjct: 457 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCK 516
Query: 373 EGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G A + D+ S Y++L+ G+C+S +L L+ +M GV N T
Sbjct: 517 AGNTDAACGVLDDMS----SSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTR 571
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG--NEGEV 483
LI CK E + + + +G P+ +++ +I L +SG NEG+
Sbjct: 572 TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQA 623
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 164/386 (42%), Gaps = 46/386 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++++ L + + LL ++ N P++ + ++I G R A K
Sbjct: 296 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV----TYTSLIDGLGKEKRSFEAYKL 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + L+ L+Q + ++K + VP+V T + +I L
Sbjct: 352 FKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK-TMTSHGCVPDVVTLSTMIDGLS 410
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+R+ M + G+ PN V ++ ++ G ++ A + + PD
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+DG K G + A DEM + G +P+ TY ++I CK + A +LDDM
Sbjct: 471 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL------------------------- 351
++V SS ++D LC+ GK+E C L+ +
Sbjct: 531 SSSRFVYSS-----LVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVD 585
Query: 352 --------LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG 403
+RK MP ++II L K GK+ E + ++ E R P +TYN L+ G
Sbjct: 586 EAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNG 645
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNV 429
M + + A + +M +G P V
Sbjct: 646 MIGANRMDRAHYYYLEMTGRGYVPPV 671
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 101/277 (36%), Gaps = 63/277 (22%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I AGR AV+ F +E + + + L++ L + ++ D M +
Sbjct: 404 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 463
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F P+ T NILI LCK DVE A DEM G P++ T+ ++ G G+ +
Sbjct: 464 F-CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDA 522
Query: 239 AKRVFGDI-----------------------------LDRGWVPDATTYTVLMDGYIKLG 269
A V D+ ++R V ++ T T L+ K
Sbjct: 523 ACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKAN 582
Query: 270 RLTDAVKVMDEMEDNGV---------------------------------EPNEVTYGVM 296
R+ +AV + + + G+ +P+ VTY +
Sbjct: 583 RVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNAL 642
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
+ + A +M R YVP ++ K+ D
Sbjct: 643 LNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLAD 679
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 10/188 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I L +A DA +L ++ + ++ +++ +G+ E F
Sbjct: 506 TYNILISGLCKAGNTDAACGVLDDMSSS------RFVYSSLVDGLCKSGKLEGGCMLFHE 559
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ V S ++ L+ L + R D +F R + +P+ + N +I AL K
Sbjct: 560 MERSGVANS-QTRTRLIFHLCKANRVDEAVSLFNAIRKEG--MPHPYAYNSIISALIKSG 616
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V V EM + P+ VT+ +L G + ++ A + ++ RG+VP +
Sbjct: 617 KVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILH 675
Query: 260 VLMDGYIK 267
L D +K
Sbjct: 676 KLADDRLK 683
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 202/417 (48%), Gaps = 6/417 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++++ A DA L+ ++ P+ + T+IR GR A+ +
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMPVEPD----AYTYNTLIRGLCGRGRTSNALAVLEDM 192
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V + LL A + Y + + H P++ T N+++ +C++
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLL-DEMHDKGCAPDIVTYNVVLNGICQEGR 251
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
VE A+ L +PS G PN V++ +L G E+A+++ ++ +G P+ T+ +
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + G + A++V+++M G PN ++Y ++ AFCK KK +A ++ M+ R
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P ++ LC G+V+ A EL +L K C P +T+I L K GK EA
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+L DE +G P ++TY+T+ +G+C + EA R + + + G+ P YN ++ G
Sbjct: 432 ELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGL 491
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK I + M+ GC PN++++++L+EGL G E ++ + + G V
Sbjct: 492 CKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 220/493 (44%), Gaps = 81/493 (16%)
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRNYGLAGRPELAVK 135
Y S +H LA AR + S+L L I ++ A +P A
Sbjct: 82 YPLLRSELHVLAAAR-LHSPASILRALPSPSASASASTPLIADMLVLALARASQPLRAYD 140
Query: 136 TFLRIEKFNVQR--SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
FL + + + S S+N LL LV KR DL F+++ + +V P+++T N +I
Sbjct: 141 AFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR-RVSPDIYTFNTVIS 199
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV---FGDILDRG 250
LC+ + A V ++ + G+ P++ T+ +++ GY +G N V ++++ G
Sbjct: 200 GLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG 259
Query: 251 WVPDATTYTVLMDGYIK-----------------------------------LGRLTDAV 275
P A T+ VL++GY K G++ + V
Sbjct: 260 ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGV 319
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+M+EMED G+ PNE+T+G +++ FCK +A + +D M +R P + +ID+
Sbjct: 320 KLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY 379
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
GK+EDA + + + +K P+ + +I + G A L DE E+G +
Sbjct: 380 RRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADV 439
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI--- 451
+TYN LI +C E+ +A +L D+M E G+EPN TYN +IQGFC GN K I
Sbjct: 440 VTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 452 --------------------------------LEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L EMLDK PN ++ + EG+ E G
Sbjct: 500 MEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559
Query: 480 EGEV-GKVVSMAT 491
++ G VS A+
Sbjct: 560 TPDIRGCTVSQAS 572
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P + + ++ L ++ A+K F R P + T+NT+I+G+C +L +AG +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI---LEEMLDKGCFPNKTSFSLLIEG 473
D+ G+ P+V TYN LI G+CK G A + L+EM++ G P +F +LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 474 LYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD--LDSGAGALDEL 522
++ N +V G S ++N L++ + S+ ++ G ++E+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 223/488 (45%), Gaps = 55/488 (11%)
Query: 21 GARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDT 80
G RCS ++ I + F+Q + A +F+ + T
Sbjct: 225 GGRCSPDVVSFNTVIHGF-------------FKQGEVSKACNLFNEM--VQKGVVPDVGT 269
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+SI+ L +ARA D E +L ++ + ++ + +I Y +G + + K
Sbjct: 270 YNSIVDALCKARAMDKAEFVLRQM-VDKGVEPDGVTYNAIIHGYSCSGHWKESAK----- 323
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
MF+ K ++P+ T + + +LCK
Sbjct: 324 ------------------------------MFRKMTSK-GLIPDTVTFSSFMSSLCKHGR 352
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A + M + G +P++V+++ +L GY G + +F + D+G V + +
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + K G + +A+ V EM+ GV PN VTY +I AFC+ + +A M+
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM-PDNAISSTIIHWLCKEGKIWEA 379
P++A+ +I C G + A E ++ K P+ S+IIH LC EG++ +A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ +F+ G P+++T+N+LI G C ++ +A + D MV G+EP+V T N L+ G
Sbjct: 533 QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSG 592
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VE 497
+CK G +G+ + EML K P +++++++GL +G K+ SG+ V+
Sbjct: 593 YCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVD 652
Query: 498 SDSWNFLL 505
D++ LL
Sbjct: 653 IDTYKILL 660
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 217/487 (44%), Gaps = 25/487 (5%)
Query: 27 STITVTPPIKPW-PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSII 85
S+ T +PP++ W PQ + V+ I R + H+ F ++ +
Sbjct: 27 SSATTSPPLRCWDPQVAF----VAAIARVRAGTFCTDDAHHL--FDELLRQGTPVHNRSL 80
Query: 86 HKL--ARARAFDAVES------LLTELKQNPEIKCGENLFITVIRNYGL-------AGRP 130
+ A ARA D+V +L + + G + +R YG+ A RP
Sbjct: 81 NDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRP 140
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+L R+ + ++ T L L KR D + + + VP+ + N
Sbjct: 141 DLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNT 200
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMG--MVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+IK+LC + A+ ++ M G P++V+ T++ G+ +G++ A +F +++
Sbjct: 201 VIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQ 260
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G VPD TY ++D K + A V+ +M D GVEP+ VTY +I + E
Sbjct: 261 KGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKE 320
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
+ + M + +P + + LC+ G+ +DA E+++ + K MPD S ++H
Sbjct: 321 SAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLH 380
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
EG+ + LF ++G + + N LI+ + + EA ++ +M +GV P
Sbjct: 381 GYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRP 440
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
NV TY+ LI FC++G + + +M+ G PN + LI G G+ + + +
Sbjct: 441 NVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFI 500
Query: 488 SMATASG 494
S + G
Sbjct: 501 SEMMSKG 507
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 202/469 (43%), Gaps = 45/469 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+ ++ S + K R++ + + +T P+I + ++ Y GR
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVS----YSILLHGYATEGRFADMNNL 394
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + +N L++A + D L+F + + V PNV T + LI A C
Sbjct: 395 FHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ-GVRPNVVTYSTLISAFC 453
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDA 255
+ + A+ +M S+G+ PN + +++ G+ GD+ AK +++ +G P+
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNI 513
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
++ ++ GR+ DA V + + G P VT+ +I+ +C K +A +LD
Sbjct: 514 VFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA 573
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+ P ++ C+ GK++D L++ +L K P + ++ L + G+
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT----------------------- 411
AKK+F E + G+ + TY L+ G+C + +LT
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN-DLTDEAITLFHKLGAMDCKFDITILN 692
Query: 412 -------------EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
EA L+ + G+ PNV TY ++I+ K G+ +E + M
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKS 752
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS-GSVESDSWNFLLT 506
GC P+ + +I L + G+ + G +S + S+E+ + + L++
Sbjct: 753 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMS 801
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + T N LI C +E A VLD M S+G+ P++VT+ T++ GY G I++ +
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L + P TY +++DG ++ GR + A K+ EM D+G + TY ++++ C+
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA L + + +I+ L + + E+A +L+ + +P+ +
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+I L KEG + EA +F E+ G PS N +I + + ++ +AG +
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 785
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ T ++L+ F G +E I+ L
Sbjct: 786 GTIISLEASTTSLLMSLFSSKGKHREQIKFL 816
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 111/317 (35%), Gaps = 78/317 (24%)
Query: 81 YHSIIHKLA-RARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+ SIIH L R DA V +L+ + P I F ++I Y L G+ E A
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIV----TFNSLIDGYCLVGKMEKAFGVL 571
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI------- 190
+ ++ V + NTL++ ++ + D ++F+ HK KV P T NI
Sbjct: 572 DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHK-KVKPTTVTYNIVLDGLLR 630
Query: 191 ----------------------------LIKALCKKDDVEGAIRVLDEMPSM-------- 214
L+K LC+ D + AI + ++ +M
Sbjct: 631 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 690
Query: 215 ---------------------------GMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
G+VPN+ T+ ++ + G +E A +F +
Sbjct: 691 LNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSME 750
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P + ++ ++ G + A M +++ + T +++ F K
Sbjct: 751 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHR 810
Query: 308 EARNLLDDMLQRKYVPS 324
E L Q Y S
Sbjct: 811 EQIKFLPAKYQFFYGAS 827
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 211/424 (49%), Gaps = 18/424 (4%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLA 127
++ FSH ++ ++ L RAR +A + L E + N +K + F ++IR+YG A
Sbjct: 95 YNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNA 154
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G + +V F ++K + SV + N+LL+ L++ R + H MF R + V P+ +T
Sbjct: 155 GLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYT 214
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI CK V+ A + EM P++VT+ TI+ G G ++ A + +L
Sbjct: 215 FNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGML 274
Query: 248 DRGWV--PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ P+ +YT L+ GY + +A+ V EM G++PN VTY +I+ + +
Sbjct: 275 KKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHR 334
Query: 306 SGEARNLL--DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
E + L D + P + +I C+ G ++ A ++++ +L PD+A
Sbjct: 335 YDEIKGFLIGGDAFT-TFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 393
Query: 364 STIIHWLCKEGKIWEAKKLFDE-FERGSI-------PSLLTYNTLIAGMCESAELTEAGR 415
S +I LC + +A+ LF+E FE+ + P YN + +C + + +A +
Sbjct: 394 SVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEK 453
Query: 416 LWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ ++++G + P+ +Y LI G C+ G K +L ML + P+ ++ +LI+GL
Sbjct: 454 VFRQLMKRGAQDPS--SYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGL 511
Query: 475 YESG 478
+ G
Sbjct: 512 LKIG 515
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 206/493 (41%), Gaps = 49/493 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDAVESLLT-E 103
L+S + +D A IF K +S N D TY++II L RA +LL
Sbjct: 218 LISGFCKNSMVDQAFTIF----KEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGM 273
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
LK+ + + T++R Y + + A+ F + ++ + + NTL+ L +
Sbjct: 274 LKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAH 333
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
RYD + P+ T NILIKA C ++ A++V EM +M + P+ ++
Sbjct: 334 RYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 393
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWV-------PDATTYTVLMDGYIKLGRLTDAVK 276
+ ++ R + + A+ +F ++ ++ + P A Y ++ + G+ A K
Sbjct: 394 SVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEK 453
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V ++ G + + +Y +I C+ K A LL ML+R++VP +ID L
Sbjct: 454 VFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLL 512
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK---------------EGKIWEAKK 381
+ G+ A + +R+LR + +P +++ L K E +I +
Sbjct: 513 KIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNID 572
Query: 382 LFDEFERGSIPS------------------LLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
L + R S L+ L+ +CE+ +L +A L +EK
Sbjct: 573 LSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEK 632
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
++ T N +I+G CK E + E+++ G + +L L +G E+
Sbjct: 633 SQMVDIDTCNTIIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLTNALEAAGKWEEL 692
Query: 484 GKVVS-MATASGS 495
V MAT S
Sbjct: 693 QFVSKRMATMRKS 705
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME--DNG-VEPNEVTYGVMI 297
R F + ++G+ ++ ++++ + L A + +E NG V+ + + +I
Sbjct: 89 RFFDWVYNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLI 148
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NC 356
++ E+ NL M + PS ++ +L + G+ A +++ + R
Sbjct: 149 RSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGV 208
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
PD+ +T+I CK + +A +F E E S P ++TYNT+I G+C + ++ A
Sbjct: 209 TPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHN 268
Query: 416 LWDDMVEKG--VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L + M++K V PN+ +Y L++G+C E + + EML +G PN +++ LI+G
Sbjct: 269 LLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKG 328
Query: 474 LYESGNEGEVGKVVSMATASGSVESDSWNF-LLTRIVSD---LDSGAGALDELL 523
L E+ E+ + A + D+ F +L + D LD+ E+L
Sbjct: 329 LSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEML 382
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 228/449 (50%), Gaps = 10/449 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
TY ++I + R FD + +L E++ E CG N + GL +G E A
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMR---ERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 302
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+E + + + L+N L +++R + + + ++ PNV LI +
Sbjct: 303 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL-DEMSCAELKPNVVVYANLIDGFMR 361
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + + A +++ EM + G+ PN +T+ ++ G G ++ A + ++ PD T
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++++G+ + DA +++ EME+ G+ PN TY +MI C+ + +A +LL++M
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P++ + +I C EG V ACE++ ++ + N +PD +++I L K G++
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 541
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E+ K F + ERG +P+ TY+ LI G ++ +L A +L M++ G++PN Y L+
Sbjct: 542 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 601
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ + K + ++ + MLD+G + + +LI L SGN +V+S +GSV
Sbjct: 602 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661
Query: 497 -ESDSWNFLLTRI--VSDLDSGAGALDEL 522
+ ++ L++ + +D + G LDE+
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEM 690
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 209/445 (46%), Gaps = 20/445 (4%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P RL P + S++ R+ + + HP ++ Y S A A DA
Sbjct: 76 PSRLSPAAISSLVRRRPSPSSP--------RLHPKLLLDF-FYWSSPQLAPSAPAPDAFA 126
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
L L L I +IR Y P + + + R + RS L+ L++
Sbjct: 127 HLAMSLCAGSLFNLANGLLIKMIRAYP---SPPVVLASIHRALSDSGHRSPAVLDVLVDT 183
Query: 159 LVQNKRYD---LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ R V LM ++ + P++ CN L+K L + D + +V + M G
Sbjct: 184 YKKSGRVQDAAEVVLMMRDR----GMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++ T++T++ Y + + AK+V ++ +RG + TY VL+ G + G + +A
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+MED G+ P+ TYG +I CK ++S EA+ LLD+M + P+ + +ID
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
EG ++A ++ K ++ P+ ++ LCK G++ A L + R S P
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+TYN +I G +A RL +M G+ PNV+TY+++I G C+ G ++ +LEE
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGN 479
M KG PN ++ LI G GN
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGN 504
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 196/414 (47%), Gaps = 4/414 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
S N TY +IH L ++ + LL E+ +K ++ +I Y G LA
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAPLISGYCREGNVSLA 508
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F ++ K NV + N+L+ L + R + F + + ++PN FT + LI
Sbjct: 509 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER-GLLPNEFTYSGLIH 567
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
K D+E A +++ M G+ PN V + +L Y DIE F +LD+G +
Sbjct: 568 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 627
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y +L+ G + A +V+ +E NG P+ Y +I CK +A +L
Sbjct: 628 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 687
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M ++ P+ +ID LC+ G + A ++ +L K +P+ +++I CK
Sbjct: 688 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 747
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G I A L++E G P Y+ L G + +L +A L ++M +G ++ ++
Sbjct: 748 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSF 806
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
N L+ GFCK G +E +++L ++ +G PN + +I GL E+G EV +
Sbjct: 807 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 860
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 223/474 (47%), Gaps = 17/474 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + L+ R+ N D A ++ A PN TY +++ L + D
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN----KITYDNLVRGLCKMGQMDR 402
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
LL ++ ++ + + +I + + A + +E + +V + + ++
Sbjct: 403 ASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 461
Query: 157 NALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+ L Q+ K DL+ M + PN F LI C++ +V A + D+M
Sbjct: 462 HGLCQSGEPEKASDLLEEMTTKG-----LKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ ++P+L + +++ G G +E + + F + +RG +P+ TY+ L+ GY+K G L
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A +++ M D G++PN+V Y ++E++ K + + ML + + + + +I
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
L G +E A + + + +PD + S++I LCK +A + DE ++G
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 696
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++ YN LI G+C+S +++ A +++ ++ KG+ PN TY LI G CK+G+ +
Sbjct: 697 PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYL 756
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
EML G P+ +S+L G +G+ + ++ G S+N L+
Sbjct: 757 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV 810
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 191/419 (45%), Gaps = 24/419 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +IH + ++ E L+ + + +K + ++I ++ +Y + E TF
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRM-LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 619
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V R L++ L + + + + K VP+V + LI LCK
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL-SGIEKNGSVPDVHVYSSLISGLCKTA 678
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D E A +LDEM G+ PN+V + ++ G GDI A+ VF IL +G VP+ TYT
Sbjct: 679 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 738
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG K+G +++A + +EM G+ P+ Y V+ +A L+++M R
Sbjct: 739 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 798
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ S+ ++D C+ GK+++ +L ++ + +P+ II L + GK+ E
Sbjct: 799 GHASISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEV 857
Query: 380 KKLFDEFER--------------------GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+F E ++ G IP L + +I C+ L +A L D
Sbjct: 858 HTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDV 916
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+V K +Y ++ C+ G E + +L+EM +G P++ +L+ L+ SG
Sbjct: 917 IVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSG 975
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK---IWEAK 380
S A+ ++D + G+V+DA E+ + + P + ++ L + +W+ +
Sbjct: 173 SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVR 232
Query: 381 KLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ G P + TY+TLI C+ E A ++ +M E+G N TYN+LI G C
Sbjct: 233 EFM--VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 290
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ G +E ++M D G P+ ++ LI GL +S E
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 333
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 219/492 (44%), Gaps = 81/492 (16%)
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRNYGLAGRPELAVK 135
Y S +H LA AR + S+L L I ++ A +P A
Sbjct: 82 YPLLRSELHVLAAAR-LHSPASILRALPSPSASASASTPLIADMLVLALARASQPLRAYD 140
Query: 136 TFLRIEKFNVQR--SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
FL + + + S S+N LL LV KR DL F+++ + +V P+++T N +I
Sbjct: 141 AFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR-RVSPDIYTFNTVIS 199
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV---FGDILDRG 250
LC+ + A V ++ + G+ P++ T+ +++ GY +G N V ++++ G
Sbjct: 200 GLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG 259
Query: 251 WVPDATTYTVLMDGYIK-----------------------------------LGRLTDAV 275
P A T+ VL++GY K G++ + V
Sbjct: 260 ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGV 319
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+M+EMED G+ PNE+T+G +++ FCK +A + +D M +R P + +ID+
Sbjct: 320 KLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY 379
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
GK+EDA + + + +K P+ + +I + G A L DE E+G +
Sbjct: 380 RRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADV 439
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI--- 451
+TYN LI +C E+ +A +L D+M E G+EPN TYN +IQGFC GN K I
Sbjct: 440 VTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 452 --------------------------------LEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L EMLDK PN ++ + EG+ E G
Sbjct: 500 MEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559
Query: 480 EGEV-GKVVSMA 490
++ G VS A
Sbjct: 560 TPDIRGCTVSQA 571
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P + + ++ L ++ A+K F R P + T+NT+I+G+C +L +AG +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI---LEEMLDKGCFPNKTSFSLLIEG 473
D+ G+ P+V TYN LI G+CK G A + L+EM++ G P +F +LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 474 LYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD--LDSGAGALDEL 522
++ N +V G S ++N L++ + S+ ++ G ++E+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 226/434 (52%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN++I +C +
Sbjct: 325 EAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNSMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ ++A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQASKAETLVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++LL++ Y NE
Sbjct: 441 YNLLVQS-YLKKNE 453
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 226/458 (49%), Gaps = 27/458 (5%)
Query: 80 TYHSIIHKLARARAFDAVES--LLTELKQNPEIKCGENLFITVIRNYGLAGRPEL-AVKT 136
TY ++I A + D ++ +L+E+++ +C NLF N + G + AV
Sbjct: 244 TYTNVIK--AHCKVGDVIKGKMVLSEMEK----ECKPNLFT---YNAFIGGLCQTGAVDE 294
Query: 137 FLRIEKFNVQRSV----RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
L ++K +++ + + L++ + KR L+F+ S + PN FT LI
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFE-SMPSSGLNPNRFTYTALI 353
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K+ ++E A+R+ DEM + G+ N+VT+ ++GG G++ A +F ++L G
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE 413
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY +L+DGY+K + A +++ EM+ + P+ TY V+I C +A +
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
LD M++ P+ + +I +E + E A EL K ++ +PD + +I LC+
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
K+ EAK L D E+G P+ TY I +S E+ A R + DM+ G+ PN
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y +LI+G C +GN E + + ML+KG P+ ++S +I L ++G E V
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 492 ASGSVESDSWNFLLTRIVS------DLDSGAGALDELL 523
+G V FL ++S D++ + DE+L
Sbjct: 654 KTGVVPD---VFLYNSLISGFCKEGDIEKASQLYDEML 688
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 204/443 (46%), Gaps = 51/443 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL--AVKTF 137
TY+ +I ++ LL E+K K + F + GL +L A +
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKAR---KLTPSPFTYSVLISGLCHSSDLQKANEVL 474
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ + V+ +V TL+ A VQ RY+ L+ +M N V+P++F N LI
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG-----VLPDLFCYNCLII 529
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC+ VE A +L +M G+ PN T+ + Y G+I+ A+R F D+L G VP
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ YT+L+ G+ +G +A+ M + G+ P+ Y +I + K K+ EA +
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII--HWLC 371
L+ VP L +I C+EG +E A +L+ +L P+ + +T+I + C
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709
Query: 372 KEGKIWEAKKLFDEF-----------------------------------ERGSIPSLLT 396
K G + EA KLFDE ++ S+ SL
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA 769
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+N+LI C+ ++ EA L+DDMV+K + PN+ TY +LI + K +E ++ +M
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829
Query: 457 DKGCFPNKTSFSLLIEGLYESGN 479
+ PN +++ L+ + GN
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGN 852
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 223/479 (46%), Gaps = 55/479 (11%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P R L+ ++ N++ AL+I N TY+++I +A+A
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRI--KDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAM 401
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
SL E+ P+ L ++++ +A EL + R + S + + L
Sbjct: 402 SLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR----KLTPSPFTYSVL 457
Query: 156 LNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
++ L + K +++ M +N V PNVF LIKA ++ E AI +L M
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNG-----VKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ G++P+L + ++ G +E AK + D+ ++G P+A TY ++ Y K G +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A + +M +G+ PN V Y ++I+ C + EA + ML++ +P +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
I L + GK ++A ++ + L+ +PD + +++I CKEG I +A +L+DE I
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692
Query: 392 -PSLLTYNTLI--AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG---------- 438
P+++ YNTLI G C+S LTEA +L+D+M+ KG+ P+ + Y +LI G
Sbjct: 693 NPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 752
Query: 439 ------------------------FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
FCK G E + ++M+DK PN ++++LI+
Sbjct: 753 LSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 204/436 (46%), Gaps = 13/436 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N Y ++I + ++ LL + N P++ C L I + R A + E A
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR----AKKVEEA 540
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + ++ + + +N ++ + FK+ +VPN ILIK
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS-GIVPNNVIYTILIK 599
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C + A+ M G++P++ ++ I+ G + A VF L G VP
Sbjct: 600 GHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVP 659
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE--AFCKGKKSGEARN 311
D Y L+ G+ K G + A ++ DEM NG+ PN V Y +I +CK EA
Sbjct: 660 DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFK 719
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L D+M+ + P + C +ID +EG +E A L+ +K+ +A +S +I C
Sbjct: 720 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS-LIDSFC 778
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K GK+ EA++LFD+ ++ P+++TY LI ++ + EA +L+ DM + + PN
Sbjct: 779 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 838
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY L+ + +IGN + I + ++M +G + ++ ++ + G E K+++ +
Sbjct: 839 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 898
Query: 491 TASG-SVESDSWNFLL 505
G +E D ++ L+
Sbjct: 899 LVEGIKLEDDVFDALI 914
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 210/426 (49%), Gaps = 8/426 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY + I+ +++ E ++ + I ++ +I+ + G A+ T
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSG-IVPNNVIYTILIKGHCDVGNTVEALST 613
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + +R+ + ++++L +N + +F K VVP+VF N LI C
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL-KTGVVPDVFLYNSLISGFC 672
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG--GYVWRGDIENAKRVFGDILDRGWVPD 254
K+ D+E A ++ DEM G+ PN+V + T++ GY G++ A ++F +++ +G PD
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD 732
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y +L+DG K G L A+ + E + V + + +I++FCK K EAR L D
Sbjct: 733 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFD 791
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
DM+ +K P+ +ID + +E+A +L+ + +N +P+ ++++ + G
Sbjct: 792 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 851
Query: 375 KIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
++ LF + E RG + Y + + C+ + EA +L + + +G++ ++
Sbjct: 852 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 911
Query: 434 MLIQGFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
LI CK + +L EM ++ +KT +LL+ G Y+SGNE E KV+ +
Sbjct: 912 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL-GFYKSGNEDEASKVLGVMQR 970
Query: 493 SGSVES 498
G V +
Sbjct: 971 LGWVPT 976
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 35/327 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + CN L++ L K + + +V M +VP++ T+T ++ + GD+ K V
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 243 FGD----------------------------------ILDRGWVPDATTYTVLMDGYIKL 268
+ ++++G PD TYT+L+DG+ K
Sbjct: 265 LSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQ 324
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
R +A + + M +G+ PN TY +I+ F K EA + D+M+ R +
Sbjct: 325 KRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTY 384
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
+I + + G++ A L+ +L PD + +I K + +A +L E +
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKA 444
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
R PS TY+ LI+G+C S++L +A + D M+ GV+PNVF Y LI+ + + +
Sbjct: 445 RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGL 474
I +L+ M+ G P+ ++ LI GL
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGL 531
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 134/255 (52%), Gaps = 2/255 (0%)
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+V+G +++ VPD TYT ++ + K+G + V+ EME +PN TY I
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGL 286
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ EA + M+++ P ++D C++ + ++A +++ + P+
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I KEG I EA ++ DE RG +++TYN +I G+ ++ E+ +A L+++
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ G+EP+ +TYN+LI G+ K + + +L EM + P+ ++S+LI GL S +
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 480 EGEVGKVVSMATASG 494
+ +V+ +G
Sbjct: 467 LQKANEVLDQMIRNG 481
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N + + I+ F EA ++ + + P+ C ++ L + + +++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESA 408
++ +PD + +I CK G + + K + E E+ P+L TYN I G+C++
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTG 290
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ EA + M+EKG+ P+ TY +L+ GFCK +KE I E M G PN+ +++
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 469 LLIEGLYESGNEGEVGKV 486
LI+G + GN E ++
Sbjct: 351 ALIDGFIKEGNIEEALRI 368
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 12/328 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGL--AGRPELAVK 135
Y+S+I + + L E+ N P I ++ T+I +YG +G A K
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV----VYNTLINDYGYCKSGNLTEAFK 719
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F + + L++ + + +F ++ K V ++ N LI +
Sbjct: 720 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK--SVGSLSAFNSLIDSF 777
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK V A + D+M + PN+VT+T ++ Y +E A+++F D+ R +P+
Sbjct: 778 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 837
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT L+ Y ++G + + +ME G+ + + YGVM A+CK KS EA LL+
Sbjct: 838 LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 897
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
L + +I LC+E ++ EL + ++ + +T++ K G
Sbjct: 898 SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGN 957
Query: 376 IWEAKKLFDEFER-GSIPSLLTYNTLIA 402
EA K+ +R G +P+ L+ I+
Sbjct: 958 EDEASKVLGVMQRLGWVPTSLSLTDSIS 985
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 232/466 (49%), Gaps = 46/466 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA-RARAFDAVESL--LTE 103
+++ R++ L A + A KF F N T+ ++I+ R +AV + + E
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKF--GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE 167
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+K P + T+I L GR A+ R+ K+ + + + +LN + ++
Sbjct: 168 MKYRPNVVTVN----TLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSG 223
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
L +F+ + + +V +I+I +LCK +++ A+ + +EM G+ ++V +
Sbjct: 224 NTALALDLFRKMEER-SIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAY 282
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
++I+GG G ++ ++ +++ R +P+ T++ L+D ++K G+L +A ++ +EM
Sbjct: 283 SSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVA 342
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G+ P+ +TY +I+ FCK + GEA +LD M+ + P+ +I+ C+ +V++
Sbjct: 343 RGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDN 402
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
L+ + K + D +T++ C+ GK+ AK+LF E RG PS++TY L+
Sbjct: 403 GMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLD 462
Query: 403 GMCESAELTEAGRLWDDMVE-----------------------------------KGVEP 427
G+C++ EL +A +++ M + KGV+P
Sbjct: 463 GLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKP 522
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+V TYN++I G CK G+ E + +M + GC P+ ++++LI
Sbjct: 523 DVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 179/367 (48%), Gaps = 37/367 (10%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ + L +A+ + K YDLV L F + N++T NI+I C+K + A V
Sbjct: 68 SLIDFSKLFSAVARRKEYDLV-LGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
+ G PN +T +T++ G+ G + A + +++ + P+ T L++G
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCL 186
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GR+T+A+ ++D M G E NE+TYG ++ CK + A +L M +R S
Sbjct: 187 KGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC---------------- 371
VID LC++G ++DA L+ + K D S+II LC
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 372 -------------------KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
KEGK+ EAK+L++E RG P +TY++LI G C+ L
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA ++ D MV KG EPN+ TY++LI +CK G+R+ E+ KG + +++ L+
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426
Query: 472 EGLYESG 478
+G +SG
Sbjct: 427 QGFCQSG 433
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 190/381 (49%), Gaps = 37/381 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G LA+ F ++E+ +++ SV + ++++L ++ D +F K + +V
Sbjct: 222 SGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK-GIKADVV 280
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ +I LC + ++L EM ++PN+VT + ++ +V G + AK ++ ++
Sbjct: 281 AYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK- 305
+ RG PD TY+ L+DG+ K RL +A +++D M G EPN VTY ++I ++CK K+
Sbjct: 341 VARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRV 400
Query: 306 -------------------------------SGE---ARNLLDDMLQRKYVPSSALCCKV 331
SG+ A+ L +M+ R PS +
Sbjct: 401 DNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGS 390
+D LC+ G+++ A E+++++ + + I + IIH +C K+ +A LF +G
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGV 520
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P +LTYN +I G+C+ L+EA L+ M E G P+ TYN+LI+ +
Sbjct: 521 KPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVE 580
Query: 451 ILEEMLDKGCFPNKTSFSLLI 471
++EEM +G + ++ +++
Sbjct: 581 LIEEMKMRGFAADASTIKMVV 601
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 125/265 (47%), Gaps = 7/265 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY S+I + +L + C N+ + +I +Y A R + ++ F
Sbjct: 351 TYSSLIDGFCKENRLGEANQMLDLMVSKG---CEPNIVTYSILINSYCKAKRVDNGMRLF 407
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
I + + NTL+ Q+ + ++ +F+ + V P+V T IL+ LC
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR-GVPPSVVTYGILLDGLCD 466
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+++ A+ + ++M M+ + + I+ G +++A +F + +G PD T
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y V++ G K G L++A + +M+++G P++ TY ++I A G + L+++M
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMK 586
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVE 342
R + + A K++ ++ +G+++
Sbjct: 587 MRGF-AADASTIKMVVVMLSDGRLD 610
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 163/295 (55%), Gaps = 1/295 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+V+ +LI LCK + A + DEM + G PN+VT T ++GGY +G+++ A+ +F
Sbjct: 254 SVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELF 313
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
I + G+ D TY V + GY K+GR+ DAV+V DEM GV PN VTY +I+ CK
Sbjct: 314 DAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKA 373
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ A ++ M + P CC ++D LC+ +++ A L+ +L+ PD
Sbjct: 374 GEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSY 433
Query: 364 STIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +IH C ++ EA L D + +P ++TY+ LI G+C S ++ A RL ++M
Sbjct: 434 TILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHV 493
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
KG P+ TY++L+ K + E + + +M+ +G P+ ++++I+G +S
Sbjct: 494 KGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKS 548
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 169/337 (50%), Gaps = 2/337 (0%)
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ F V+ +V + +++ L +N D F N V PN FT LI+ LC
Sbjct: 177 DGFFVKGNVVMYSIVIDCLCRNGFVD-EGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGK 235
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++DEM G+ ++ T ++ G G + A+ +F ++++RG+ P+ T T
Sbjct: 236 FLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTA 295
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
LM GY G + A ++ D + + G + + TY V I +CK + +A + D+M +
Sbjct: 296 LMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREG 355
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP+ +ID LC+ G+V A E+ K + R PD ++ LCK ++ +A
Sbjct: 356 VVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAI 415
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
LF++ E G P + +Y LI G C S + EA L DM K + P++ TY+ LI G
Sbjct: 416 LLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGL 475
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
C+ G R+L EM KG P+ ++S+L++ L++
Sbjct: 476 CRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWK 512
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 8/336 (2%)
Query: 151 SLNTLLNALVQNKRYD-------LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
S L+N L +N R + ++ + + F V NV +I+I LC+ V+
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+EM G+ PN T+ +++ G G + +++ RG +TVL+D
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G K G L +A ++ DEM + G EPN VT ++ +C AR L D + + +
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 323
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
I C+ G+V DA ++ + R+ +P+ +++I LCK G++ A ++
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIV 383
Query: 384 DEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
R G P ++T L+ G+C+S L +A L++ +VE G+ P+V++Y +LI G C
Sbjct: 384 KTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS 443
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + +L +M K P+ ++S LI+GL SG
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSG 479
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 139/305 (45%), Gaps = 44/305 (14%)
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G + + +FG IL RG+ D ++ G G + A++ DE+ +NG NEV+Y
Sbjct: 86 GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK--------VIDLLCEEGKVEDAC 345
G++I C+ + EA NLL + + K K VID LC G V++
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
E + ++ P+ ++I LC GK E L DE RG S+ + LI G+
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265
Query: 405 CESAELTEAGRLWDDMVEKGVEPN-----------------------------------V 429
C++ L EA ++D+MV +G EPN V
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+TYN+ I G+CK+G ++ +R+ +EM +G PN +++ LI+ L ++G ++V
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385
Query: 490 ATASG 494
SG
Sbjct: 386 MHRSG 390
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 156/320 (48%), Gaps = 7/320 (2%)
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVV 182
Y L G ++A + F I ++ +R V + N ++ + R D V + + R VV
Sbjct: 300 YCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREG--VV 357
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN+ T N LI LCK +V GA ++ M G+ P++VT +L G ++ A +
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILL 417
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++ G PD +YT+L+ G R+ +A+ ++ +M + P+ VTY +I+ C+
Sbjct: 418 FNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCR 477
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A LL++M + +P + ++D L ++ +++A L+ +++++ PD
Sbjct: 478 SGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMC 537
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I CK +I EA LF E + +P ++TY L + +S + + + +
Sbjct: 538 YTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIR 597
Query: 422 EKGVEPNVFTYNMLIQGFCK 441
+ P V Y + CK
Sbjct: 598 DINPPPRVLKY---LAALCK 614
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++ ++++G + N +++G C G + + +E+++ G N+ S+ +LI GL
Sbjct: 94 IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153
Query: 476 ESGNEGEVGKVVSMATASGSVESDSW----NFLLTRIVSDLDSGAGALDE 521
E+G E ++ M E D + N ++ IV D G +DE
Sbjct: 154 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 189/378 (50%), Gaps = 6/378 (1%)
Query: 107 NPEIKCGEN--LFITVIRNYGLAGR---PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
N EI+ N F+ +RN +G+ + A+ F + K N SV LL +V+
Sbjct: 28 NHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVK 87
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
K Y + K + P+ F N++I +LC V VL M +G+ P++V
Sbjct: 88 MKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVV 147
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T T ++ G +GD+ A + + G+ D TY VL++G K+G+ ++AV + +M
Sbjct: 148 TFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKM 207
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E+ PN V Y +++ CK EA L +M + P+ +I LC G+
Sbjct: 208 EERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRW 267
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTL 400
++A L +++ MPD + ++ LCKEGKI +AK + G +P + TYN+L
Sbjct: 268 KEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSL 327
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I C ++ EA R+++ MV +G P++ Y LI G+CKI N + + +L+EM+ G
Sbjct: 328 IDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGF 387
Query: 461 FPNKTSFSLLIEGLYESG 478
P+ +++ LI G + G
Sbjct: 388 TPDVVTWTTLIGGFCQVG 405
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 203/413 (49%), Gaps = 14/413 (3%)
Query: 121 IRNYGL-------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMF 172
++ YG+ G+ AV ++E+ N +V +T+++ L ++ + + L
Sbjct: 181 VKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCL 240
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ S K PN+ T LI+ LC + A +LDEM MG++P+L + ++
Sbjct: 241 EMSGKGIK--PNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCK 298
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G I AK V G ++ G VPD TY L+D Y ++ +A +V + M G P+ V
Sbjct: 299 EGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVA 358
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I +CK K +A +LLD+M++ + P +I C+ G+ A EL+ +
Sbjct: 359 YTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH 418
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELT 411
+ +P+ + I+ LCK + EA LF E+ ++ +++ Y+ ++ GMC + +L
Sbjct: 419 KYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLN 478
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A L+ + KG++ NV+ Y ++I GF K G + +L M + GC P+ ++++ +
Sbjct: 479 TALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFV 538
Query: 472 EGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSGAGALDELL 523
+GL K ++M G SV++ + ++ + + + G L E L
Sbjct: 539 QGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLST--NQGDNELREFL 589
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 39/256 (15%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN-GVEPNEVTY 293
I+ A F + +P +T+L+ +K+ T A+ ++ EM + G++P+
Sbjct: 55 SIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFIL 114
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
V+I + C K ++L ML+ PS
Sbjct: 115 NVVINSLCHLKLVAFGFSVLGTMLKLGLEPS----------------------------- 145
Query: 354 KNCMPDNAISSTI-IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELT 411
++ TI I+ LC +G + A +L D E+ G + TY LI G+C+ + +
Sbjct: 146 -------VVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTS 198
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA M E+ PNV Y+ ++ G CK G E + + EM KG PN +++ LI
Sbjct: 199 EAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLI 258
Query: 472 EGLYESGNEGEVGKVV 487
+GL G E G ++
Sbjct: 259 QGLCNFGRWKEAGSLL 274
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 205/424 (48%), Gaps = 10/424 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENL 116
AL +F K S N Y+++IH + SL E+ + P++ NL
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDV-VTYNL 305
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
I + + EL ++ ++ Q + N +++ R MF+ +
Sbjct: 306 IIDALCKARAMDKAELVLR---QMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK 362
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ ++PN+ CN + +LCK + A + D M + G P++V++ T+L GY G
Sbjct: 363 SR-GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWF 421
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ +F + G D + +L+ Y K G + DA+ + EM+ GV P+ VTY +
Sbjct: 422 ADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTV 481
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I AF + + +A + M+ R P++A+ +I C G + A EL ++ K
Sbjct: 482 ISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGI 541
Query: 357 -MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +++I+ LCK+G++ +A +FD + G P ++T+ +LI G C ++ +A
Sbjct: 542 PRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAF 601
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ D M GVE ++ TY+ L+ G+ K G +G+ + EM KG PN ++ +++ GL
Sbjct: 602 KILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661
Query: 475 YESG 478
+ +G
Sbjct: 662 FRAG 665
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 174/365 (47%), Gaps = 3/365 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A RP+L + F I + ++ + +TLL L R + + + + VPNVF
Sbjct: 170 ARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVF 229
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV--PNLVTHTTILGGYVWRGDIENAKRVFG 244
+ +I++K LC + A+ + M G PN+V + T++ G+ G+ A +F
Sbjct: 230 SYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFH 289
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
++ +G PD TY +++D K + A V+ +M NG +P+ VTY MI +
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLG 349
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + M R +P+ +C + LC+ G+ ++A E++ + K PD
Sbjct: 350 RLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYC 409
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T++H EG + LF+ + I + +N LI + + +A ++ +M ++
Sbjct: 410 TLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQ 469
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV P+V TY+ +I F ++G + + +M+ +G PN + +I+G G +
Sbjct: 470 GVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKA 529
Query: 484 GKVVS 488
++VS
Sbjct: 530 KELVS 534
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 185/423 (43%), Gaps = 46/423 (10%)
Query: 119 TVIRNYGLAGRPELAVKTFL-RIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFK 173
T+++ A R E AV L R+ + +V S + +L L N + DL +M K
Sbjct: 197 TLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAK 256
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
PNV N +I K+ + A + EM G+ P++VT+ I+
Sbjct: 257 EGG---ACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
++ A+ V + G PD TY ++ GY LGRL +A K+ +M+ G+ PN V
Sbjct: 314 RAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVIC 373
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVP------------------------------ 323
+ + CK +S EA + D M + + P
Sbjct: 374 NSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKS 433
Query: 324 -SSALCCKVIDLL----CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
A C+V ++L + G V+DA ++ + ++ PD ST+I + G++ +
Sbjct: 434 NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTD 493
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV-EPNVFTYNMLI 436
A + F++ RG P+ Y+++I G C L +A L +M+ KG+ P++ +N +I
Sbjct: 494 AMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVI 553
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK G + I + + D G P+ +F+ LI+G G + K++ G V
Sbjct: 554 NSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG-V 612
Query: 497 ESD 499
E+D
Sbjct: 613 ETD 615
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 193/416 (46%), Gaps = 28/416 (6%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
++ +IH A+ D + TE++Q +P++ + TVI + GR A
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV----TYSTVISAFSRMGRLTDA---- 494
Query: 138 LRIEKFN--VQRSVRSLNTLLNALVQN--------KRYDLVHLMFKNSRHKFKVVPNVFT 187
+EKFN V R ++ + ++++Q K +LV M + P++
Sbjct: 495 --MEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPR----PDIVF 548
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N +I +LCK V A + D + +G P+++T T+++ GY G ++ A ++ +
Sbjct: 549 FNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAME 608
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G D TY+ L+DGY K GR+ D + + EM+ GV+PN VTYG+M+ + ++
Sbjct: 609 VVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
AR +M++ + ++ ++ LC ++A L+++L N I +T+I
Sbjct: 669 AARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ + K + EAK+LF G +P+ TY +I + + + +A ++ M + G+
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIV 788
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
P N +I+ + G + L ++ K ++ SL++ G E
Sbjct: 789 PGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHE 844
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN-LLDD 315
TY++LMD + R + + + G++ +++T +++ C ++ EA N LL
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CMPDNAISSTIIHWLCKE 373
M + VP+ ++ LC+ + A +L++ + ++ C P+ +T+IH KE
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G+ +A LF E R G P ++TYN +I +C++ + +A + M G +P+ TY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
N +I G+ +G KE ++ +M +G PN + + L + G E ++ TA
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 493 SG 494
G
Sbjct: 399 KG 400
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 194/396 (48%), Gaps = 29/396 (7%)
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNY----GLAGRPELAVKTFLRI 140
+H L R + + +SL E+ N + GE+LF + +Y + +L VK+ R+
Sbjct: 86 LHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARV 145
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK-KD 199
N S+ +L + +P V + N ++ A+ + K
Sbjct: 146 NLINKALSIVNL-----------------------AKSYGFMPGVLSYNAILDAVIRTKQ 182
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A + EM G+ PN+ T+ ++ G+ G++E FG++ G +P+ TY
Sbjct: 183 SVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYN 242
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++D Y KL ++ +A K++ M G+ PN ++Y V+I C+ + E +L++M +R
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+YVP +I+ C G A L +++ P+ +T+I+ +CK G + A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ D+ +RG P+ TY TLI G + L +A ++ +MVE G P + TYN LI G
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
C +G ++ +L+EM+++G P+ S+S +I G
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 197/373 (52%), Gaps = 10/373 (2%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNS 175
+IR + AG E+ + F +E+ +V + NT+++A + ++ + L+ LM
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ PN+ + N++I LC++ ++ +L+EM VP+ VT T++ GY G+
Sbjct: 269 LN-----PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A + +++ G P+ TYT L++ K G L A++ +D+M D G+ PN TY
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ F + +A ++ +M++ + P+ +I+ C G++EDA L + ++ +
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD STII C+ ++ +A +L E +G P + TY++LI G+C+ L E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ +M+ G+ P+ TY LI +C G+ + +R+ +EM+ KG P+ ++++LI G
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563
Query: 475 YESGNEGEVGKVV 487
+ E +++
Sbjct: 564 NKQSRTKEAKRLL 576
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 170/313 (54%), Gaps = 16/313 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T LI ++CK ++ A+ LD+M G+ PN T+TT++ G+ +G ++ A ++
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++++ G+ P TY L++G+ LGR+ DA ++ EM + G P+ V+Y +I FC+
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR 460
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A L +M+ + P A +I LC++ ++ + C+L++ +L PD
Sbjct: 461 NQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVT 520
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I+ C EG + +A +L DE ++G P ++TYN LI G + + EA RL ++
Sbjct: 521 YTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Query: 422 EKGVEPNVFTYNMLI---------------QGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ PN TYN LI +GFC G E R+LE ML KG N+
Sbjct: 581 YEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV 640
Query: 467 FSLLIEGLYESGN 479
++++I G + GN
Sbjct: 641 YNVIIHGHSKVGN 653
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI---------------L 227
P++ T N+LI K+ + A R+L ++ VPN +T+ T+ +
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALM 610
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ +G + A RV +L +G+ + Y V++ G+ K+G + A + EM +G
Sbjct: 611 KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFA 670
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ VT + ++ K E LLD L+ + +AL +I + +EG ++ +
Sbjct: 671 PHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNV 730
Query: 348 WKRLLRKNCMP 358
K + +P
Sbjct: 731 LKDMALSGLLP 741
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 218/419 (52%), Gaps = 21/419 (5%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRP 130
NF + TY+S++H + R D + + E+K + P+ +C ++ I +GL +
Sbjct: 200 NFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILI-----HGLCEQS 251
Query: 131 ELA-VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH----LMFKNSRHKFKVVPNV 185
+L +FL V S+ S+NT+++ + D+ LM KN ++ +
Sbjct: 252 KLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNG-----LLHDS 306
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
F+ NIL+ LC ++ A+ D+M G+ P++VT+ T+ G++ G + A++V
Sbjct: 307 FSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQK 366
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L +G PD TYT L+ G+ ++G + +A+K+ E G + N + Y +++ CK +
Sbjct: 367 MLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGR 426
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L D+M + P + +I LC+EG V+ A +L++++ K P +
Sbjct: 427 IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRA 486
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ L K G I EA+ FD + R + ++ YN +I G + EA +L+ M+E+G
Sbjct: 487 VLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG 546
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ P+V T+N LI GFC+ G+ E ++LE + KG P+ +++ L+ E GN E+
Sbjct: 547 ITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEM 605
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 158/321 (49%), Gaps = 1/321 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ ++ +V NI+I + D + A+++ +M G+ P++VT T++ G+ RGD+
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+++ I +G VP TYT LM+ Y ++G + + + EME N V P VTY V+I
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ C+ K E+ LL+ M + +P S +I C+ ++ A +L+ +L NC
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRL 416
P +I+ LC G + + ++ E +I +TY T+I C ++++A
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGY 748
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
++ M+ KG ++ Y+ +I CK G E ML +G P+ ++ ++
Sbjct: 749 FNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQ 808
Query: 477 SGNEGEVGKVVSMATASGSVE 497
GN V + ++M SG +
Sbjct: 809 QGNNSSVFEFLAMVVKSGFIS 829
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 6/385 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ T+I + G E A+K LR E + + +V N LL+ L + R + +F +
Sbjct: 379 YTTLICGHCQMGNIEEALK--LRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF-D 435
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
++ P+ +ILI LCK+ V+ A ++ ++M P+ +L G G
Sbjct: 436 EMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNG 495
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+I A+ F + D Y +++DGY++L + +A+++ +M + G+ P+ VT+
Sbjct: 496 NISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFN 555
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I FC+ EAR +L+ + + VPS +++ CE G +++ +
Sbjct: 556 TLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEA 413
+P + + +I LC++ K+ E+ +L + + +G +P +TYNT+I C+ E+T+A
Sbjct: 616 AVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKA 675
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+L++ M+ +P TY +LI C G+ K+ R++ + D+ K ++ +I+
Sbjct: 676 LQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKA 735
Query: 474 LYESGNEGEVGKVVSMATASGSVES 498
G + + A G V S
Sbjct: 736 HCAKGQVSKALGYFNQMLAKGFVIS 760
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 171/369 (46%), Gaps = 2/369 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
GR E A+ F +E ++ + L++ L + + +++ R K K P+ F
Sbjct: 424 VGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF-PHHF 482
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
++ L K ++ A D M ++ ++V + ++ GYV I A +++ +
Sbjct: 483 AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKM 542
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++RG P T+ L++G+ + G L +A K+++ + G+ P+ VTY ++ A+C+
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
E + L +M VP+ +I LC + K+ ++ +L + + K +PD+ +TI
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 367 IHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I CK +I +A +L++ P+ +TY LI +C +L + R+ + ++ +
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
TY +I+ C G + + +ML KG + +S +I L + G E
Sbjct: 723 TLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782
Query: 486 VVSMATASG 494
M + G
Sbjct: 783 FFVMMLSEG 791
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R W + + +L Y + + DA+ V+ +M+D + + TY ++ + +
Sbjct: 164 RNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDI 220
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
++ +++ S +I LCE+ K+EDA K P +TI+
Sbjct: 221 MWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMS 279
Query: 369 WLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK G I A+ F + G + +YN L+ G+C + + EA DDM + GVEP
Sbjct: 280 KFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEP 339
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+V TYN L +GF +G +++++ML +G P+ +++ LI G + GN E K+
Sbjct: 340 DVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKL 398
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%)
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+S +IH LC++ K+ +A + + PS+++ NT+++ C+ + A + MV+
Sbjct: 240 TSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVK 299
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G+ + F+YN+L+ G C G+ E + ++M G P+ +++ L +G G
Sbjct: 300 NGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSG 359
Query: 483 VGKVVSMATASG 494
KVV G
Sbjct: 360 ARKVVQKMLLQG 371
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 238/510 (46%), Gaps = 15/510 (2%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF 74
L +S A +LS + V P + P + S+ R L+L Y+ +
Sbjct: 26 LFKSALSADPALSPLAVLPHLAATPSLPHLLLTASVAGRPHTTSLSL----YSRLKSLSL 81
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
+ H ++ L A AF + + F ++R+ AG+P A+
Sbjct: 82 PIPTASLHPLLSSLPPAPAFVLFADIF-----RLRLPLSTTTFNIMLRHLCTAGKPVRAL 136
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ ++ N + NT++ R + + R + + P+ +T +I
Sbjct: 137 ELLRQMPSPNAV----TYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISG 192
Query: 195 LCKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE A +V DEM + G V PN V + ++GGY +G++E A R G+++DRG
Sbjct: 193 WCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSM 252
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY + + GR +A +++EM + G+ P+ TY ++I +CK K +A +
Sbjct: 253 TVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMF 312
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ M+ + + +I L +G V++ L+ +R+ PD + + +I+ C
Sbjct: 313 EVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTG 372
Query: 374 GKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + A ++ E E+ I P +TYNTL+ G+C L EA L ++M ++G++P++ +Y
Sbjct: 373 GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSY 432
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
N LI G+ G+ K+ +++ +EM+ KG P +++ +I+GL +G G+ +V
Sbjct: 433 NTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVG 492
Query: 493 SGSVESDSWNFLLTRIVSDLDSGAGALDEL 522
+G DS L ++ D A D++
Sbjct: 493 NGITPDDSTYISLIEGLTTEDERLAAGDDV 522
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 18/409 (4%)
Query: 126 LAGRPEL-AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN 184
+AGRP ++ + R++ ++ SL+ LL++L + L +F+ ++ +
Sbjct: 61 VAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAFVLFADIFR-----LRLPLS 115
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
T NI+++ LC A+ +L +MPS PN VT+ T++ G+ RG ++ +
Sbjct: 116 TTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMR 171
Query: 245 DILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAFCK 302
++ +RG + PD TY ++ G+ K+G++ DA KV DEM G VEPN V Y +I +C
Sbjct: 172 EMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCD 231
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A +M+ R + A + L EG+ +A L + + K PD
Sbjct: 232 QGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFT 291
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I+ CKEGK +A K+F+ +G +++TY +LI + + E RL++D V
Sbjct: 292 YNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAV 351
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+G+ P++F YN LI C G+ I+ EM K P+ +++ L+ GL G
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLD 411
Query: 482 EVGKVVSMATASGSVESD--SWNFLLT--RIVSDLDSGAGALDELLVKN 526
E ++ T G ++ D S+N L++ + D+ DE++ K
Sbjct: 412 EARGLIEEMTKRG-IQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKG 459
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 212/469 (45%), Gaps = 34/469 (7%)
Query: 65 HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRN- 123
H A + P F H +Y +++H L R SL++ L LF +++R
Sbjct: 108 HLASR--PPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTM 165
Query: 124 --------------------YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
Y +G AV+ F + K +R LL +V+ +
Sbjct: 166 PRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLR 225
Query: 164 RYDL-----VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
++ ++L +S + P ++ N+L+ CK DV A V DE+P G+ P
Sbjct: 226 PVEIERSWALYLEVLDSGYP----PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRP 281
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+V+ T++ G GD+E R+ G + G PD T++ L++G K GRL + +
Sbjct: 282 TVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLF 341
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
DEM G+ PN VT+ +I+ CKG K A ML + P +I+ LC+
Sbjct: 342 DEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV 401
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
G +++A L + PD +T+I CK+G + A ++ E G + +
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAF 461
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
LI+G+C + +AGR+ DM+ G +P+ TY M+I FCK G+ K G ++L+EM
Sbjct: 462 TALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
G P +++ L+ GL + G ++ G +D ++N LL
Sbjct: 522 DGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN 398
++E + L+ +L P + ++H CK G + A+ +FDE +RG P+++++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TLI+G C+S ++ E RL M +GV P+VFT++ LI G CK G EG + +EM +
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRI--VSDLDS 514
G PN +F+ LI+G + G K M A G V D ++N L+ + V DL
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG-VRPDLVTYNALINGLCKVGDLKE 406
Query: 515 GAGALDEL 522
++E+
Sbjct: 407 ARRLVNEM 414
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 175/301 (58%), Gaps = 2/301 (0%)
Query: 181 VVPNVFTCNILIKALCKKDD-VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
++P++ CN +++ L +D ++ A V + M G+ P +VT+ T+L + +G ++ A
Sbjct: 150 MLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEA 209
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ + G +P+ TY VL++G G L A +++ EM G+E + TY +I
Sbjct: 210 LQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRG 269
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+C+ + EA L ++ML R VP+ ++ LC+ G+V DA +L ++ KN MPD
Sbjct: 270 YCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 329
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+T+I+ + G I EA LF E RG +PS++TYNTLI G+C +L A RL D
Sbjct: 330 LVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKD 389
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M++ G +P+VFT+ +L++GFCK+GN + +EML++G P++ ++ I G + G
Sbjct: 390 EMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449
Query: 479 N 479
+
Sbjct: 450 D 450
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 179/354 (50%), Gaps = 4/354 (1%)
Query: 124 YGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
YGL GR A K + N+ + S NTL+ + L+F R + +
Sbjct: 303 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFR-GL 361
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP+V T N LI LC+ D++ A+R+ DEM G P++ T T ++ G+ G++ AK
Sbjct: 362 VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKE 421
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F ++L+RG PD Y + G +KLG + A + +EM G P+ +TY V I+
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 481
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K EA L+ ML VP +I G + A ++ +L K P
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVV 541
Query: 362 ISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +IH G++ A F+ E+G P+++TYN LI G+C+ ++ +A + + +M
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM 601
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
KG+ PN +TY +LI C +G+ +E +R+ ++MLD+ P+ + S L++ L
Sbjct: 602 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 168/315 (53%), Gaps = 1/315 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P V T N ++ + CK+ V+ A+++L +M MG +PN VT+ ++ G G++E AK +
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++L G A TY L+ GY + G+L +A ++ +EM G P VTY ++ CK
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +AR LLD M+ + +P +I G + +A L+ L + +P
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I LC+ G + A +L DE + G P + T+ L+ G C+ L A L+D+M+
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+G++P+ F Y I G K+G+ + + EEML +G P+ ++++ I+GL++ GN
Sbjct: 428 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 487
Query: 482 EVGKVVSMATASGSV 496
E ++V +G V
Sbjct: 488 EASELVKKMLYNGLV 502
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 178/337 (52%), Gaps = 4/337 (1%)
Query: 145 VQRSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
++ +V + NT+L++ Q K + + L+ + K +PN T N+L+ L ++E
Sbjct: 186 IRPTVVTYNTMLDSFCKQGKVQEALQLLLQ--MQKMGCLPNDVTYNVLVNGLSHSGELEQ 243
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A ++ EM +G+ + T+ ++ GY +G ++ A R+ ++L RG VP TY +M
Sbjct: 244 AKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMY 303
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G K GR++DA K++D M + + P+ V+Y +I + + GEA L ++ R VP
Sbjct: 304 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVP 363
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
S +ID LC G ++ A L +++ PD + ++ CK G + AK+LF
Sbjct: 364 SVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELF 423
Query: 384 DE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
DE RG P Y T I G + + ++A + ++M+ +G P++ TYN+ I G K+
Sbjct: 424 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKL 483
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
GN KE ++++ML G P+ +++ +I +G+
Sbjct: 484 GNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 202/398 (50%), Gaps = 13/398 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +++ L+ + + + L+ E+ + ++ + +IR Y G+ + A +
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLR-LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEE 285
Query: 140 IEKFNVQRSVRSLNTLLNAL-----VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ ++ + NT++ L V + R L ++ KN ++P++ + N LI
Sbjct: 286 MLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN------LMPDLVSYNTLIYG 339
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
+ ++ A + E+ G+VP++VT+ T++ G GD++ A R+ +++ G PD
Sbjct: 340 YTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPD 399
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T+T+L+ G+ KLG L A ++ DEM + G++P+ Y I K +A + +
Sbjct: 400 VFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQE 459
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ML R + P ID L + G +++A EL K++L +PD+ ++IIH G
Sbjct: 460 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 519
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ +A+ +F E +G PS++TY LI L A + +M EKGV PNV TYN
Sbjct: 520 HLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYN 579
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
LI G CK+ + + EM KG PNK ++++LI
Sbjct: 580 ALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 161/315 (51%), Gaps = 3/315 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP + T N ++ LCK V A ++LD M + ++P+LV++ T++ GY G+I A
Sbjct: 292 VPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 351
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F ++ RG VP TY L+DG ++G L A+++ DEM +G +P+ T+ +++ FC
Sbjct: 352 LFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFC 411
Query: 302 KGKKSGEARNLLDDMLQRKYVPSS-ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K A+ L D+ML R P A +++ L + G A + + +L + PD
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQEEMLARGFPPDL 470
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I L K G + EA +L + G +P +TY ++I + L +A ++ +
Sbjct: 471 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLE 530
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ KG+ P+V TY +LI + G K I EM +KG PN +++ LI GL +
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590
Query: 480 EGEVGKVVSMATASG 494
+ K + A G
Sbjct: 591 MDQAYKFFTEMQAKG 605
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 149/332 (44%), Gaps = 73/332 (21%)
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
KK +E + V +M S GM+P D++N RV + DR
Sbjct: 130 AKKSMLEKCLLVFYKMVSKGMLP----------------DLKNCNRVLRLLRDR------ 167
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
D I + R +V + M + G+ P VTY M+++F
Sbjct: 168 -------DSSIDVAR-----EVYNVMVECGIRPTVVTYNTMLDSF--------------- 200
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
C++GKV++A +L ++ + C+P++ + +++ L G+
Sbjct: 201 --------------------CKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240
Query: 376 IWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +AK+L E R G S TY+ LI G CE +L EA RL ++M+ +G P + TYN
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ G CK G + ++L+ M++K P+ S++ LI G GN GE + + G
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360
Query: 495 SVES-DSWNFLLTRI--VSDLDSGAGALDELL 523
V S ++N L+ + + DLD DE++
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T N+ I L K +++ A ++ +M G+VP+ VT+T+I+ ++ G + A+ V
Sbjct: 468 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAV 527
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L +G P TYTVL+ Y GRL A+ EM + GV PN +TY +I CK
Sbjct: 528 FLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 587
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K +A +M + P+ +I+ C G ++A L+K +L + PD+
Sbjct: 588 VRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCT 647
Query: 363 SSTIIHWLCKEGK 375
S ++ L K+ K
Sbjct: 648 HSALLKHLNKDYK 660
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 70/132 (53%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+V T +LI + + ++ AI EM G+ PN++T+ ++ G ++ A
Sbjct: 536 IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAY 595
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ F ++ +G P+ TYT+L++ LG +A+++ +M D ++P+ T+ +++
Sbjct: 596 KFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655
Query: 301 CKGKKSGEARNL 312
K KS R+L
Sbjct: 656 NKDYKSHVVRHL 667
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 194/370 (52%), Gaps = 6/370 (1%)
Query: 111 KC--GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV 168
KC G + + V+++ AG A++ F ++ + S+ + N L+N+ +
Sbjct: 5 KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+F++ + + +V P+ +T N LI LC + EGA ++L EM + N+ T+++I+
Sbjct: 65 LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
V E + +V +++ G PD + +M G+ + + A +V M ++G +P
Sbjct: 125 SLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKP 184
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK--YVPSSALCCKVIDLLCEEGKVEDACE 346
+ V+Y ++I K K E+ +L +M R YVP+ +I LC G++E A E
Sbjct: 185 DNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 244
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMC 405
++ +L C P+ +T+I LC+ K+ +A++LF++ + I P + YN+LIAG C
Sbjct: 245 VFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 304
Query: 406 ESAELTEAGRLWDDMV-EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
+ + EA +L+ +M G++P + T+N LI GFCK+G ++ EM KG +
Sbjct: 305 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADT 364
Query: 465 TSFSLLIEGL 474
++ +LI GL
Sbjct: 365 CTYRILIAGL 374
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 216/427 (50%), Gaps = 15/427 (3%)
Query: 79 DTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
D Y ++ LA+A +A + E++ +E P + N+ I N G G+
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFETMKSE-SCVPSL-VTYNVLINSRCNAGEFGKALDLF 68
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
++ R ++ R + NTL++ L + + + R K + NVFT + +IK+
Sbjct: 69 QSMKREKRVEPDR--WTYNTLISGLCSSGNTEGARKLLSEMRDK-NIAANVFTYSSIIKS 125
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L K+ E + +VL+EM + G P++ ++ G+ ++E A+ V+ +++ G+ PD
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEM--EDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
+Y +L+ G K+G+L +++K++ EM G PN +T+ +I C+ + +A +
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLC 371
ML+ P+ +I LC KV A EL++++ + C+P +A++ +++I C
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA-CIPPDAVAYNSLIAGYC 304
Query: 372 KEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K G + EA+KL+ E G+ P+++T+NTLI G C+ +L A L +M KG+ +
Sbjct: 305 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADT 364
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TY +LI G + E + + ++M +K + S + GL ++GN + V
Sbjct: 365 CTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEA 424
Query: 490 ATASGSV 496
SG+V
Sbjct: 425 TRKSGAV 431
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 148/333 (44%), Gaps = 38/333 (11%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R N++ A +++ + + + +YH +IH LA+ D +L+E+
Sbjct: 163 RSNNMEKAREVYQHM--VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM-------- 212
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+R G +V + +TL++ L + + +F
Sbjct: 213 -------AMRAAGYV-------------------PNVITFSTLIHGLCRTGELEKALEVF 246
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
S + PN +T LI LC+ + V A + ++M + P+ V + +++ GY
Sbjct: 247 -GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305
Query: 233 RGDIENAKRVFGDILD-RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
RG ++ A++++ ++ G P T+ L+DG+ KLG+L A +++ EM G+ +
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++I + K EA + M ++K++ C + LC+ G ++ A +++
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 425
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ +P+ + L K G++ +A+KL +
Sbjct: 426 RKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 5/200 (2%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
V+ L + G + A E+++ + ++C+P + +I+ C G+ +A LF +R
Sbjct: 16 VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75
Query: 391 I--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
P TYNTLI+G+C S A +L +M +K + NVFTY+ +I+ K +E
Sbjct: 76 RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTR 507
++LEEM+ GC P+ +F+ +++G S N + +V SG ++ S++ L+
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 508 I--VSDLDSGAGALDELLVK 525
+ + LD L E+ ++
Sbjct: 196 LAKIGKLDESLKILSEMAMR 215
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 225/497 (45%), Gaps = 88/497 (17%)
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA----GRPELAVKTFLRIEKFN 144
A R DA++ +L + Q + C N+F I GL + L + + + +
Sbjct: 138 ADKRTSDAMDIVLRRMTQ---LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 145 VQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V S T++N + +K Y H M ++PNV T N +I ALCK
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG-----ILPNVVTYNSIIAALCKAQA 249
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ VL M G++PN T+ +I+ GY G + A + G PD TY
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-- 318
LMD K GR T+A K+ D M G++P TYG +++ + E LLD M++
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 319 ---RKYVPSSALCC------------------------------KVIDLLCEEGKVEDAC 345
YV S +C VI +LC+ G+VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWL----------------------------------- 370
+++++ + P N + +++IH L
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CKEG++ E++KLFD R G P+++TY+TLI G C + ++ EA +L MV G++P+
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN LI G+CKI ++ + + EM G P+ +++++++GL+++ ++
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 490 ATASGS-VESDSWNFLL 505
T SG+ +E ++N +L
Sbjct: 610 ITESGTQLELSTYNIIL 626
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 213/438 (48%), Gaps = 7/438 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ F++ +LD A +H N TY+SII L +A+A D
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYNSIIAALCKAQAMDKAM 254
Query: 99 SLLTELKQNPEI-KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+LT + +N + C + +++ Y +G+P+ A+ ++ V+ V + N+L++
Sbjct: 255 EVLTSMVKNGVMPNC--RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L +N R MF +S K + P + T L++ K + +LD M G+
Sbjct: 313 YLCKNGRCTEARKMF-DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN + ++ Y +G ++ A VF + +G PD TY ++ K GR+ DA++
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++M D + P + Y +I + C K +A+ L+ +ML R + +ID C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
EG+V ++ +L+ ++R P+ ST+I C GK+ EA KL G P +T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNTLI G C+ + + +A L+ +M GV P++ TYN+++QG + + +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 457 DKGCFPNKTSFSLLIEGL 474
+ G +++++++ GL
Sbjct: 612 ESGTQLELSTYNIILHGL 629
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 39/338 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
+V PN+ T ILI K LC A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW--VPDATTYTVL 261
+ VL M +G +PN+ ++ +L G + A + + D G PD +YT +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++G+ K G L A EM D G+ PN VTY +I A CK + +A +L M++
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P+ ++ C G+ ++A K++ PD ++++ +LCK G+ EA+K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+FD +RG P + TY TL+ G L E L D MV G+ PN + +++LI +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G + + + +M +G P+ ++ +I L +SG
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 128/247 (51%), Gaps = 4/247 (1%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TY +L+ GRL + + G + + + +++ C K++ +A +
Sbjct: 88 TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIH 368
+ L M Q +P+ ++ LC+E + ++A EL + + +C PD +T+I+
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
KEG + +A + E +RG +P+++TYN++IA +C++ + +A + MV+ GV P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TYN ++ G+C G KE I L++M G P+ +++ L++ L ++G E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 488 SMATASG 494
T G
Sbjct: 328 DSMTKRG 334
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 139/300 (46%), Gaps = 4/300 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTFLR 139
Y+S+IH L +D + L+ E+ C + +F ++I ++ GR + K F
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V+ ++ + +TL++ + D + S + P+ T N LI CK
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLA-SMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A+ + EM S G+ P+++T+ IL G AK ++ I + G + +TY
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++ G K +A+++ + ++ T+ +MI A K ++ EA++L +
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP + + L E+G +E+ +L+ + C ++ + ++I+ L + G I A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 46/191 (24%)
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG---VEPNVFTYN 433
+A+ +FDE RG S+ N +A + + R ++ M G V PN+ TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTYG 95
Query: 434 MLIQ----------GFCKIGNA-KEGIR-------------------------ILEEMLD 457
+LI GF +GN K+G R +L M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS---VESDSWNFLLTRIV--SDL 512
GC PN S+++L++GL + E +++ M G + S+ ++ DL
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 513 DSGAGALDELL 523
D G E+L
Sbjct: 216 DKAYGTYHEML 226
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 218/419 (52%), Gaps = 21/419 (5%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRP 130
NF + TY+S++H + R D + + E+K + P+ +C ++ I +GL +
Sbjct: 200 NFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILI-----HGLCEQS 251
Query: 131 ELA-VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH----LMFKNSRHKFKVVPNV 185
+L +FL V S+ S+NT+++ + D+ LM KN ++ +
Sbjct: 252 KLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNG-----LLHDS 306
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
F+ NIL+ LC ++ A+ D+M G+ P++VT+ T+ G++ G + A++V
Sbjct: 307 FSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQK 366
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L +G PD TYT L+ G+ ++G + +A+K+ E G + N + Y +++ CK +
Sbjct: 367 MLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGR 426
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L D+M + P + +I LC+EG V+ A +L++++ K P +
Sbjct: 427 IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRA 486
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ L K G I EA+ FD + R + ++ YN +I G + EA +L+ M+E+G
Sbjct: 487 VLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG 546
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ P+V T+N LI GFC+ G+ E ++LE + KG P+ +++ L+ E GN E+
Sbjct: 547 ITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEM 605
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ ++ +V NI+I + D + A+++ +M G+ P++VT T++ G+ RGD+
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+++ I +G VP TYT LM+ Y ++G + + + EME N V P VTY V+I
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ C+ K E+ LL+ M + +P S +I C+ ++ A +L+ +L NC
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRL 416
P +I+ LC G + + ++ E +I TY T+I C ++++A
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGY 748
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
++ M+ KG ++ Y+ +I CK G E ML +G P+ ++ ++
Sbjct: 749 FNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQ 808
Query: 477 SGNEGEVGKVVSMATASGSVE 497
GN V + ++M SG +
Sbjct: 809 QGNNSSVFEFLAMVVKSGFIS 829
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 6/385 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFN--VQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ T+I + G E A+K LR E + + +V N LL+ L + R + +F +
Sbjct: 379 YTTLICGHCQMGNIEEALK--LRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF-D 435
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
++ P+ +ILI LCK+ V+ A ++ ++M P+ +L G G
Sbjct: 436 EMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNG 495
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+I A+ F + D Y +++DGY++L + +A+++ +M + G+ P+ VT+
Sbjct: 496 NISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFN 555
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I FC+ EAR +L+ + + VPS +++ CE G +++ +
Sbjct: 556 TLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEAN 615
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEA 413
+P + + +I LC++ K+ E+ +L + + +G +P +TYNT+I C+ E+T+A
Sbjct: 616 AVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKA 675
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+L++ M+ +P TY +LI C G+ K+ R++ + D+ K ++ +I+
Sbjct: 676 LQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKA 735
Query: 474 LYESGNEGEVGKVVSMATASGSVES 498
G + + A G V S
Sbjct: 736 HCAKGQVSKALGYFNQMLAKGFVIS 760
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 171/369 (46%), Gaps = 2/369 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
GR E A+ F +E ++ + L++ L + + +++ R K K P+ F
Sbjct: 424 VGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF-PHHF 482
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
++ L K ++ A D M ++ ++V + ++ GYV I A +++ +
Sbjct: 483 AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKM 542
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++RG P T+ L++G+ + G L +A K+++ + G+ P+ VTY ++ A+C+
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
E + L +M VP+ +I LC + K+ ++ +L + + K +PD+ +TI
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 367 IHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I CK +I +A +L++ P+ +TY LI +C +L + R+ + ++ +
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
TY +I+ C G + + +ML KG + +S +I L + G E
Sbjct: 723 TLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782
Query: 486 VVSMATASG 494
M + G
Sbjct: 783 FFVMMLSEG 791
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R W + + +L Y + + DA+ V+ +M+D + + TY ++ + +
Sbjct: 164 RNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDI 220
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
++ +++ S +I LCE+ K+EDA K P +TI+
Sbjct: 221 MWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMS 279
Query: 369 WLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK G I A+ F + G + +YN L+ G+C + + EA DDM + GVEP
Sbjct: 280 KFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEP 339
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+V TYN L +GF +G +++++ML +G P+ +++ LI G + GN E K+
Sbjct: 340 DVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKL 398
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%)
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+S +IH LC++ K+ +A + + PS+++ NT+++ C+ + A + MV+
Sbjct: 240 TSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVK 299
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G+ + F+YN+L+ G C G+ E + ++M G P+ +++ L +G G
Sbjct: 300 NGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSG 359
Query: 483 VGKVVSMATASG 494
KVV G
Sbjct: 360 ARKVVQKMLLQG 371
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 181/367 (49%), Gaps = 5/367 (1%)
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLV 168
++C + +++ GR A++ F +E + Q V S TL+N L + R D
Sbjct: 6 MQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAA 65
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+F+ PN FT N L+ LCK+D ++ A V+ E P++VT+ T++
Sbjct: 66 FDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMA 125
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G ++ A F + + G+VP ++ ++ G + RL DA++V +EM D P
Sbjct: 126 ALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 185
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N VTY V+I+ CK + EA+ LLD M+ P ++ G+++ A L
Sbjct: 186 NLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLL 245
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCES 407
+R++ + C+PD + +I LCK G++ +A ++F E P+++TY+ LI G C +
Sbjct: 246 RRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRA 305
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ + E G++ M E PNV TYN +I G + +E + EM + G P+ ++
Sbjct: 306 SRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362
Query: 468 SLLIEGL 474
L L
Sbjct: 363 RGLKRAL 369
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 3/304 (0%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGD 245
T +I+++ LC+ V A+ D + P++V++TT++ G G ++ A +F
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 246 ILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
++ G P+A TY L+DG K RL A V+ E P+ VTY ++ A +
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA M + YVP+ +I LC ++ DA E++ ++ ++ P+ S
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I LCK ++ EA++L D G P L+ Y L+ G + L A L MV +
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G P+V TY ++I CK+G + I E++ C PN ++S LI G + E
Sbjct: 252 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 311
Query: 484 GKVV 487
GKV+
Sbjct: 312 GKVM 315
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 144/277 (51%), Gaps = 6/277 (2%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMD-EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T ++++ G + GR+ A++ D +E +P+ V+Y +I CK + A +L
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 316 MLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M+ P++ ++D LC++ +++ A + +++ PD +T++ L + G
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
++ EA F + E G +P+L+++N +I G+C + L +A ++++M+++ PN+ TY+
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATA 492
++I G CK E ++L+ M+ +GC P+ +++ L+ G +G + +G + M +
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251
Query: 493 SGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
+ ++ ++ ++ V +D EL+ C
Sbjct: 252 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 288
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/539 (24%), Positives = 244/539 (45%), Gaps = 72/539 (13%)
Query: 37 PWPQRLYP--KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
P P P +R+V +I Q++ ALQ F +A K PNF+H+ TY ++IHKL R F
Sbjct: 6 PTPSLAVPTHERIVHLILDQKSAPQALQTFEWASKL-PNFTHSQSTYRALIHKLLTFRRF 64
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
V+ LL E+ ++ + E++F+T+IR G A +K + ++ S++ N+
Sbjct: 65 HTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNS 124
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L+ LV+ + DL ++ + + +T IL+K LC + + ++L + S
Sbjct: 125 ILDVLVK-EDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSR 183
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDI---------------------------- 246
G+ PN+V + T+L G + A+ + +I
Sbjct: 184 GLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCKEDNFVQALVLL 243
Query: 247 ---LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
G+VPD T T +++ +GR+T+AV++++ +E G + V + +I+ FCK
Sbjct: 244 EKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKF 303
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K LL +M ++ +P++ +I CE G +E A +++ + +
Sbjct: 304 GKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTF 363
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE--RGSI-PSLLTYNTLIAGMCESAELTEA------- 413
T+I L G+ + K+ + E RG S+ YN+++ G+ L EA
Sbjct: 364 DTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKM 423
Query: 414 --------------------------GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
R++D M +G P+ Y+ LI GFC+ G +E
Sbjct: 424 ENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVRE 483
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+ ++ EM+ G FP ++F+ LI G G +G K++ G V ++ S++ L+
Sbjct: 484 ALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLI 542
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 159/391 (40%), Gaps = 67/391 (17%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK--------CGENLFITVI----RNY 124
N Y++++H L SL+ E+K+ ++ C E+ F+ + +++
Sbjct: 188 NVVIYNTLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCKEDNFVQALVLLEKSF 247
Query: 125 GLA------------------GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
L GR AV+ R+E V + NTL+ + +
Sbjct: 248 SLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVK 307
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
L H + K K +PN T N LI C+ +E A+ + ++M + G+ N VT T+
Sbjct: 308 LGHGLLKEMERK-GCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTL 366
Query: 227 LGGYVWRGDIENAKRVF-----------GDILDRGWV----------------------- 252
+ G RG E+ ++ G I V
Sbjct: 367 IKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENL 426
Query: 253 -PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P A ++ + G+ + G + +A +V D+M + G P+ + Y +I FC+ EA
Sbjct: 427 FPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALE 486
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L+++M+ Y P ++ +I C GK A +L + ++ + C+PD S +I LC
Sbjct: 487 LMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALC 546
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
++ +A L + E G P L +N+L
Sbjct: 547 RKKSFQKAASLLLQMVENGITPDYLIWNSLF 577
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N ++ L +K+ + A+ L +M ++ P V + + G+ G I+ AKRV+ + +
Sbjct: 401 NSVLYGLYRKNMLNEALEFLMKMENL--FPRAVDRSLRILGFCEEGAIQEAKRVYDQMNN 458
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G +P A Y L+ G+ + G + +A+++M+EM G P T+ +I FC+ K G
Sbjct: 459 EGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGS 518
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A LL+DM+ R VP + +ID LC + + A L +++ PD I +++ H
Sbjct: 519 ALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFH 578
Query: 369 WLCKE 373
L ++
Sbjct: 579 CLSQQ 583
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 207/416 (49%), Gaps = 15/416 (3%)
Query: 66 YAGKFHPNFSHNYDTYHSIIH------KLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
YA F + T++ +I+ KL +A+ F L+ L P + + T
Sbjct: 179 YAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIG---LMEALGIKPNVVT----YNT 231
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I Y GR E A F ++ V+ + + ++ + + + + M + + +
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK-EI 290
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N LI C K ++E A D+M G++P + T+ ++ ++ A
Sbjct: 291 GLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEA 350
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ ++G VPD+ TY +L++GY + G + A + DEM G++P VTY +I
Sbjct: 351 DGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYV 410
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
K + +A +L + ++++ P + +ID C G ++ A + K + + +PD
Sbjct: 411 LSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPD 470
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+T++ C+EGK+ A++L +E + RG P ++YNTLI+G + ++ +A R+ D
Sbjct: 471 EVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 530
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+M+ G P + TYN LIQG CK ++L+EM+ KG PN ++ LIEG+
Sbjct: 531 EMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 187/346 (54%), Gaps = 4/346 (1%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ +V + NT+++ R + ++F + + V P+ +T I +CK+
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCR-GVKPDSYTYGSFISGMCKEG 275
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A +L++M +G+ P VT+ T++ GY +G++E A ++ G +P +TY
Sbjct: 276 KLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYN 335
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ ++ +A ++ EM + G+ P+ VTY ++I +C+ +A L D+M+ +
Sbjct: 336 MLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISK 395
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +I +L + G+++ A +L+++++RK PD + + +I C G + A
Sbjct: 396 GIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRA 455
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ E ++ + P +T+NTL+ G C ++ A L ++M +G++P+ +YN LI G
Sbjct: 456 FAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISG 515
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL--YESGNEGE 482
+ K G+ K+ R+ +EML G P +++ LI+GL E G+ E
Sbjct: 516 YSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 202/381 (53%), Gaps = 5/381 (1%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R + A + F ++ V V + N +L+ +++ R + +++ + ++ +V T
Sbjct: 136 RGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYA-EMFRMRIKSSVVTF 194
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NI+I LCK+ ++ A + M ++G+ PN+VT+ TI+ GY RG +E A+ +F +
Sbjct: 195 NIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC 254
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG PD+ TY + G K G+L +A ++++M++ G+ P VTY +I+ +C
Sbjct: 255 RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEM 314
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A + D M++ +P+ + +I L + K+++A + K + K +PD+ + +I+
Sbjct: 315 AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C+ G + +A L DE +G P+ +TY +LI + + + +A L++ +V KG+ P
Sbjct: 375 GYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
++ +N LI G C GN +L+EM P++ +F+ L++G G +++
Sbjct: 435 DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELI 494
Query: 488 SMATASGSVESD--SWNFLLT 506
+ G ++ D S+N L++
Sbjct: 495 EEMKSRG-IKPDHISYNTLIS 514
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 11/349 (3%)
Query: 141 EKFN---VQRSVRSLNT------LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
E FN V R V + T L+ A + KR D F + K V+P+V CN +
Sbjct: 104 EVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGK-GVIPHVHACNDM 162
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ K + E A + EM M + ++VT ++ G ++ AK G + G
Sbjct: 163 LSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGI 222
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TY ++ GY GR+ A + D M+ GV+P+ TYG I CK K EA
Sbjct: 223 KPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASG 282
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+L+ M + P++ +ID C +G +E A + +++R+ MP + + +IH L
Sbjct: 283 MLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALF 342
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ K+ EA + E E+G +P +TYN LI G C + +A L D+M+ KG++P
Sbjct: 343 LDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRV 402
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
TY LI K G K+ + E+++ KG FP+ F+ LI+G +GN
Sbjct: 403 TYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGN 451
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 190/375 (50%), Gaps = 14/375 (3%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N TY++IIH +R R A ++ +L + +K + + I G+ E A
Sbjct: 225 NVVTYNTIIHGYCSRGRVEGA--RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASG 282
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++++ ++ + + NTL++ ++ +++ + ++P V T N+LI AL
Sbjct: 283 MLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMA-FDYRDKMVREGLMPTVSTYNMLIHAL 341
Query: 196 ---CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK D+ +G I+ EM G+VP+ VT+ ++ GY G+++ A + +++ +G
Sbjct: 342 FLDCKMDEADGIIK---EMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQ 398
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TYT L+ K GR+ A + +++ G+ P+ + + +I+ C A +
Sbjct: 399 PTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAM 458
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M Q K VP ++ C EGKVE A EL + + + PD+ +T+I K
Sbjct: 459 LKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSK 518
Query: 373 EGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + +A ++ DE G P+LLTYN LI G+C++ E A +L +M+ KG+ PN T
Sbjct: 519 RGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNT 578
Query: 432 YNMLIQGFCKIGNAK 446
Y LI+G IGN +
Sbjct: 579 YLSLIEG---IGNVE 590
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 181/350 (51%), Gaps = 11/350 (3%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G ELA++ F EK + + L++ L + R D F+ +H +PN +
Sbjct: 173 SGNLELALRYF---EKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHT--AIPNNW 227
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T ++I L K V A RVL EMP VP L +T+++GG+ GD+ A + D+
Sbjct: 228 TYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDM 283
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+G+ D TY L+ G+ +L + A ++++EM+ N P+ TY ++I C+ K+
Sbjct: 284 KRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRL 343
Query: 307 GEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EAR+LL + + P+ +ID + +V DA +L+ ++ PD ST
Sbjct: 344 SEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYST 403
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I LC G+ EA +E + +P + Y+++I+G+C + EL A ++D MV G
Sbjct: 404 LIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANG 463
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+PN+ YN LI G CK G + ++EM ++GC P+ ++ LI GL
Sbjct: 464 CQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGL 513
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 216/487 (44%), Gaps = 52/487 (10%)
Query: 24 CSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHS 83
CSL V ++P L K L++ + + NL+LAL+ F P + T+
Sbjct: 145 CSLYEEMVDRGLRPVV--LTCKFLLNALCKSGNLELALRYFEKMSSI-PCAA----TWTI 197
Query: 84 IIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTFLRIE 141
+I L RA D E+K N TV+ N GL AG+ A + +
Sbjct: 198 LIDGLFRAIRVDEACYYFEEMKHTA---IPNNWTYTVVIN-GLVKAGKVAEAERVLQEMP 253
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+ + A K Y HL+ R ++ + T N LI C+ ++
Sbjct: 254 VPTLANYTSVIGGHCKAGDMGKAY---HLLEDMKRKGYQ--GDNLTYNTLIHGHCRLQEI 308
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATTYTV 260
+ A +L+EM S VP++ T+ ++ G + A+ + G + + P+ +Y
Sbjct: 309 DRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNT 368
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+DG+ K R+ DA ++ EM G P+ VTY +I C ++ EA + L++M+ +K
Sbjct: 369 LIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKK 428
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P + VI LC G+++ A ++ ++ C P+ A+ +++I+ LCK G++ +AK
Sbjct: 429 ILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK 488
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE------------- 426
E ERG P +TY TLI G+C + EA L+ +E+G+E
Sbjct: 489 LRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL 548
Query: 427 -------------------PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
P F Y +I+ CK N E ++LE+M+ G P+ ++
Sbjct: 549 RCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTV 608
Query: 468 SLLIEGL 474
L+ +
Sbjct: 609 DALVGAM 615
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 198/437 (45%), Gaps = 23/437 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++IH R + D LL E+K N P+I + L + R L+ +L
Sbjct: 294 TYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLL--G 351
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILI 192
LR E + +V S NTL++ + R Y L M +H P+V T + LI
Sbjct: 352 TLRNED-DCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQH-----PDVVTYSTLI 405
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ LC A L+EM ++P + +++++ G G+++ A VF ++ G
Sbjct: 406 RGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQ 465
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ Y L+ G K GRL DA + EM + G P+ VTYG +I C+ ++ EA +L
Sbjct: 466 PNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDL 525
Query: 313 LDDMLQRKYVPSSALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L++ S C VI L C +E A + + +L P +T+I LC
Sbjct: 526 YVRSLEQGIEISETSCNVVIASLRC----LEQAQRVLRVVLATGNSPTAFFYATVIESLC 581
Query: 372 KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KE + EA++L ++ I P T + L+ MC + A ++MV G +P+V
Sbjct: 582 KENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVG 641
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDK-GCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TY+ L+ K G E +L ++ CFP++ + LI E V+
Sbjct: 642 TYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQE 701
Query: 490 ATASGSVES-DSWNFLL 505
+ ++S ++N LL
Sbjct: 702 LKSKWGIQSIVAYNTLL 718
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 174/375 (46%), Gaps = 42/375 (11%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
K+N Q S R + +L+ +V+N +V + +R F+ V T N +AL +
Sbjct: 50 KWNGQLSQRLVGVILH-MVKNGESAMVFFGWAGTRQDFR--HTVHTYNCFYEALIRTGQC 106
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW---------- 251
E A R+ E ++P+ +T+ ++ G G ++ A ++ +++DRG
Sbjct: 107 EEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFL 166
Query: 252 ----------------------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
+P A T+T+L+DG + R+ +A +EM+ + PN
Sbjct: 167 LNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PN 225
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
TY V+I K K EA +L +M VP+ A VI C+ G + A L +
Sbjct: 226 NWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLE 281
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESA 408
+ RK DN +T+IH C+ +I A +L +E + +P + TY+ LIAG+C +
Sbjct: 282 DMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAK 341
Query: 409 ELTEAGRLWDDMV-EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L+EA L + E PNV +YN LI GF K + ++ EM+ G P+ ++
Sbjct: 342 RLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTY 401
Query: 468 SLLIEGLYESGNEGE 482
S LI GL +G E
Sbjct: 402 STLIRGLCNAGRASE 416
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 202/506 (39%), Gaps = 77/506 (15%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R Q +D A ++ +F + TY +I L RA+ LL L+ E C
Sbjct: 304 RLQEIDRAYELLEEMKS--NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRN--EDDC 359
Query: 113 GENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
N+ + T+I + A R A + FL + V + +TL+ L R H
Sbjct: 360 TPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHS 419
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ K K++P V + +I LC+ +++ A V D M + G PNL + +++ G
Sbjct: 420 YLEEMVGK-KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGL 478
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G + +AK ++ +RG PD TY L+ G + R +A + + G+E +E
Sbjct: 479 CKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISE 538
Query: 291 VT--------------------------------YGVMIEAFCKGKKSGEARNLLDDMLQ 318
+ Y +IE+ CK EAR LL+DM+
Sbjct: 539 TSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIG 598
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK--- 375
P + ++ +C + K A + ++R P ST+++ L K GK
Sbjct: 599 AGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSE 658
Query: 376 ------------------IW---------------EAKKLFDEFE-RGSIPSLLTYNTLI 401
+W EA+ + E + + I S++ YNTL+
Sbjct: 659 AHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLL 718
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ + L L +M N T+N+LIQGFC++G +R+L EM K
Sbjct: 719 KGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLT 777
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVV 487
P+ L++ L + E E +V
Sbjct: 778 PSAAIIKFLVDELARAEREQESKDLV 803
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 219/493 (44%), Gaps = 81/493 (16%)
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRNYGLAGRPELAVK 135
Y S +H LA AR + S+L L I ++ A +P A
Sbjct: 82 YPLLRSELHVLAAAR-LHSPASILRALPSPSASASASTPLIADMLVLALARASQPLRAYD 140
Query: 136 TFLRIEKFNVQR--SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
FL + + + S S+N LL LV KR DL F+++ + +V P+++T N +I
Sbjct: 141 AFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR-RVSPDIYTFNTVIS 199
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV---FGDILDRG 250
LC+ + A V ++ + G+ P++ T+ +++ GY +G N V ++++ G
Sbjct: 200 GLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG 259
Query: 251 WVPDATTYTVLMDGYIK-----------------------------------LGRLTDAV 275
P A T+ VL++GY K G++ + V
Sbjct: 260 ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGV 319
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+M+EMED G+ PNE+T+G +++ FCK +A + +D M +R P + +ID
Sbjct: 320 KLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGY 379
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
GK+EDA + + + +K P+ + +I + G A L DE E+G +
Sbjct: 380 RRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADV 439
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI--- 451
+TYN LI +C E+ +A +L D+M E G+EPN TYN +IQGFC GN K I
Sbjct: 440 VTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499
Query: 452 --------------------------------LEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L EMLDK PN ++ + EG+ E G
Sbjct: 500 MEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559
Query: 480 EGEV-GKVVSMAT 491
++ G VS A+
Sbjct: 560 TPDIRGCTVSQAS 572
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P + + ++ L ++ A+K F R P + T+NT+I+G+C +L +AG +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI---LEEMLDKGCFPNKTSFSLLIEG 473
D+ G+ P+V TYN LI G+CK G A + L+EM++ G P +F +LI G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 474 LYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD--LDSGAGALDEL 522
++ N +V G S ++N L++ + S+ ++ G ++E+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 185/350 (52%), Gaps = 4/350 (1%)
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+E +L +LKQ E +F VI YG A P+ A + F RI F +R+V+S+N+LL
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLL 60
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
AL++N++ + + +F + + P+ T NILI A C D++ V DEM G+
Sbjct: 61 AALLKNRQLEKMTQVFVDISNYGS--PDACTFNILIHAACLCGDLDAVWGVFDEMQKRGV 118
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAV 275
PN+VT T++ G ++ A R+ D++ + P+A+ YT L+ G+ +G L A
Sbjct: 119 KPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAF 178
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+ +EM + V+ Y +I A K + E ++L +M + P + +I+
Sbjct: 179 KLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGH 238
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C+E +E A + ++ K C PD +TII WLCKEGK+ +A L ++ RG P +
Sbjct: 239 CKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDV 298
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
L+Y + G+CE +L EA + D+M+ KG P + N L+ C+ N
Sbjct: 299 LSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECN 348
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 4/311 (1%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A +V + +PS + + ++L + +E +VF DI + G PDA T+ +L+
Sbjct: 37 AFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIH 95
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV- 322
G L V DEM+ GV+PN VT+G +I K EA L +DM++ +
Sbjct: 96 AACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIK 155
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P++++ +I C G++ A +L + ++ N +A+ ST+I L K G+ E +
Sbjct: 156 PNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDI 215
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E E G P +TYN +I G C+ +L A R+ D+MVEKG +P+VF++N +I CK
Sbjct: 216 LREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCK 275
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDS 500
G + + +LE+M +GC P+ S+ ++ +GL E E ++ G V ++S
Sbjct: 276 EGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNES 335
Query: 501 WNFLLTRIVSD 511
N L+ R+ +
Sbjct: 336 INKLVDRLCQE 346
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 150/305 (49%), Gaps = 22/305 (7%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L++ + + + L+ Q+F + S + T++ +IH DAV + E+ Q
Sbjct: 59 LLAALLKNRQLEKMTQVFVDISNYG---SPDACTFNILIHAACLCGDLDAVWGVFDEM-Q 114
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-----FNVQRSVRSLNTLLNALVQ 161
+K F T+I YGL+ +L K LR+++ + ++ + TL+
Sbjct: 115 KRGVKPNVVTFGTLI--YGLSLNSKL--KEALRLKEDMVKVYMIKPNASIYTTLIKGFCG 170
Query: 162 ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
N + L M ++ K+V V++ LI AL K E +L EM G
Sbjct: 171 VGELNFAFKLKEEMVTSN---VKLVSAVYS--TLISALFKHGRKEEVSDILREMGENGCK 225
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+ VT+ I+ G+ D+E+A RV +++++G PD ++ ++ K G+L A+ +
Sbjct: 226 PDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDL 285
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+++M G P+ ++Y ++ + C+ + EA ++LD+M+ + YVP + K++D LC+
Sbjct: 286 LEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQ 345
Query: 338 EGKVE 342
E +E
Sbjct: 346 ECNME 350
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD + +IH C G + +FDE + RG P+++T+ TLI G+ +++L EA RL
Sbjct: 85 PDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRL 144
Query: 417 WDDMVE-KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+DMV+ ++PN Y LI+GFC +G ++ EEM+ +S LI L+
Sbjct: 145 KEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALF 204
Query: 476 ESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
+ G + EV ++ M ++ ++N ++ +DL+S +DE++ K C
Sbjct: 205 KHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGC 259
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 207/396 (52%), Gaps = 3/396 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+SI++ + R+ +L ++++ +K + T+I + G + A+ F
Sbjct: 195 TYNSIVNGICRSGDTSLAFDMLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ SV + N+L+ L + +++ L+ K+ + ++VPNV T N+L+ K+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 312
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + EM + G+ PN++T+ T++ GY + + A + ++ PD T+T
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ GY + R+ D +KV + G+ N VTY ++++ FC+ K A L +M+
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P ++D LC+ GK+E A E+++ L + + +TII +CK GK+ +A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF +G P+++TY +I+G+C+ L+EA L M E G PN TYN LI+
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G+ +++EEM G + +S ++I+ L
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 204/386 (52%), Gaps = 3/386 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G LA ++E+ NV+ V + +T++++L ++ D +FK K + +V
Sbjct: 206 SGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVV 264
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N L++ LCK +L +M S +VPN++T +L +V G ++ A ++ ++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG P+ TY LMDGY RL++A ++D M N P+ VT+ +I+ +C K+
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+ + ++ +R V ++ ++ C+ GK++ A EL++ ++ +PD +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LC GK+ +A ++F++ ++ + ++ Y T+I GMC+ ++ +A L+ + KGV
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+PNV TY ++I G CK G+ E +L +M + G PN +++ LI G+ K
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 486 VV-SMATASGSVESDSWNFLLTRIVS 510
++ M + S ++ S ++ ++S
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 190/379 (50%), Gaps = 17/379 (4%)
Query: 116 LFITVIRNYGLAGRPELA--VKTFLRIEKFN-------------VQRSVRSLNTLLNALV 160
LF +IR+ L G + + R ++FN + ++ +LN ++N
Sbjct: 75 LFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ + + + K P+ T N LI LC + V A+ ++D M G P++
Sbjct: 135 RCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDM 193
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ +I+ G GD A + + +R D TY+ ++D + G + A+ + E
Sbjct: 194 VTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
ME G++ + VTY ++ CK K + LL DM+ R+ VP+ ++D+ +EGK
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNT 399
+++A EL+K ++ + P+ +T++ C + ++ EA + D R P ++T+ +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G C + + +++ ++ ++G+ N TY++L+QGFC+ G K + +EM+ G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 460 CFPNKTSFSLLIEGLYESG 478
P+ ++ +L++GL ++G
Sbjct: 434 VLPDVMTYGILLDGLCDNG 452
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 182/438 (41%), Gaps = 83/438 (18%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +V+ I R + LA + N + TY +II L R DA
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKME--ERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGR---PELAVKTFLRIE------KFNV---- 145
SL E+ + IK + +++R AG+ L +K + E FNV
Sbjct: 249 SLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 146 ----------------------QRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKF 179
++ + NTL++ R +++ LM +N
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN----- 362
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K P++ T LIK C V+ ++V + G+V N VT++ ++ G+ G I+ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ +F +++ G +PD TY +L+DG G+L A+++ ++++ + ++ V Y +IE
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CKG GKVEDA L+ L K P+
Sbjct: 483 MCKG-----------------------------------GKVEDAWNLFCSLPCKGVKPN 507
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I LCK+G + EA L + E G+ P+ TYNTLI +LT + +L +
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 419 DMVEKGVEPNVFTYNMLI 436
+M G + + M+I
Sbjct: 568 EMKSCGFSADASSIKMVI 585
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 138/279 (49%), Gaps = 6/279 (2%)
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD-RGWVPDA 255
KKDD AI + EM +P LV + + R N F L+ G +
Sbjct: 68 KKDD---AIALFQEMIRSRPLPGLVDFSRFFSA-IARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T ++++ + + + A V+ ++ G EP+ T+ +I C K +A L+D
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDR 183
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++ P +++ +C G A ++ +++ +N D STII LC++G
Sbjct: 184 MVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
I A LF E E +G S++TYN+L+ G+C++ + + L DMV + + PNV T+N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ F K G +E + +EM+ +G PN +++ L++G
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 10/160 (6%)
Query: 333 DLLCEEGKVEDACEL-WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS- 390
DLLC +CE + + N + S I+ K +A LF E R
Sbjct: 30 DLLCTISSFLSSCERDFSSITNGNVCFRERLRSGIVDI-----KKDDAIALFQEMIRSRP 84
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+P L+ ++ + + + + + G+ N++T N++I FC+
Sbjct: 85 LPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
+L +++ G P+ T+F+ LI GL EG+V K V +
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLINGLCL---EGKVSKAVVLV 181
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 173/324 (53%), Gaps = 1/324 (0%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F +VP+ ++I C+ + A+RV DEM G +P++VT+ T+L G + +
Sbjct: 10 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 69
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+ + ++ +RG PD T+T L+ GY G+L A+++ D M + + P+ VTY +I+
Sbjct: 70 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 129
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C+ +A +L DDM R+ P+ +ID CE+G+VEDA ++ K +P
Sbjct: 130 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 189
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
+ ++II C+ G + + +K + + P L+TYNTLI G + ++ +A +L
Sbjct: 190 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 249
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ M ++ V+P+V TYNMLI GF GN +E I E+M KG P++ ++ +I G +
Sbjct: 250 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 309
Query: 478 GNEGEVGKVVSMATASGSVESDSW 501
GN E ++ G D +
Sbjct: 310 GNSKEAFQLHDEMLQRGFAPDDKF 333
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 159/298 (53%), Gaps = 2/298 (0%)
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L EM G+VP+ V +T ++GG+ G + +A RV +++ G +PD TY L++G K
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
RL DA +++EM + GV P+ T+ +I +C K +A L D ML ++ P
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF- 386
+ID +C +G ++ A +LW + + P++ S +I C++G++ +A DE
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G +P+++TYN++I G C S +++ + M+ V P++ TYN LI G+ K
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
+ ++L M + P+ ++++LI G GN E G + A G +E D + ++
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG-IEPDRYTYM 300
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 156/314 (49%), Gaps = 2/314 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
++ VI + AG A++ + V + NTLLN L + +R +
Sbjct: 18 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 77
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
R + V P++ T LI C + ++ A+++ D M + + P++VT+ T++ G +GD
Sbjct: 78 RER-GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A ++ D+ R P+ TY++L+D + + G++ DA +DEM + G+ PN +TY
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ +C+ + + L M+ K P +I +E K+ DA +L + ++
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD + +I+ G + EA +F++ +G P TY ++I G + EA
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316
Query: 415 RLWDDMVEKGVEPN 428
+L D+M+++G P+
Sbjct: 317 QLHDEMLQRGFAPD 330
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPELAVKTF 137
TY+++++ L + R E LL E+++ P C F T+I Y + G+ + A++ F
Sbjct: 53 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC---TFTTLIHGYCIEGKLDKALQLF 109
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + + NTL++ + + D + ++ + H ++ PN T +ILI + C+
Sbjct: 110 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW-DDMHSREIFPNHVTYSILIDSHCE 168
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
K VE A LDEM + G++PN++T+ +I+ GY G++ ++ ++ PD T
Sbjct: 169 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 228
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L+ GYIK ++ DA K+++ ME V+P+ VTY ++I F EA + + M
Sbjct: 229 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 288
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ P +I+ G ++A +L +L++ PD+
Sbjct: 289 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 212/412 (51%), Gaps = 14/412 (3%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N + TY+S+++ L R D + + E+K + +N + I GL + L
Sbjct: 198 NLQVSIATYNSLLYNL---RHTDIMWDVYNEIKAS---GVPQNEYTNPILIDGLCRQSRL 251
Query: 133 A-VKTFLRI---EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
TFLR E+F SV S N L++ + D+ F K+ ++P+V++
Sbjct: 252 QDAVTFLRETGGEEFG--PSVVSFNALMSGFCKMGSVDVAKSFF-CMMIKYGLLPDVYSY 308
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NIL+ LC +E A+ ++M + G+ P++VT+ + G+ G I A +V +L
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL 368
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G PD TYT+L+ G+ ++G + ++ K+ ++M G++ + VTY V++ + CK + E
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A LL +M P +I LC+ G VE+A EL++ + K P++ + S II
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 488
Query: 369 WLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L ++G I EA+ FD + + ++ YN +I G + + EA R + ++EKG+ P
Sbjct: 489 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 548
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ T+N LI GFCK G E +++L+ + G P +++ L+ G E G+
Sbjct: 549 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 177/336 (52%), Gaps = 8/336 (2%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV---PNVFTCNILIKALCKKDDVEGA 204
S+ + LL++L ++ R D ++ H+ +V+ P++ T ++LI LCK+ VE A
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILL----HEMEVIGLKPDLLTYSVLIHGLCKRGAVEEA 464
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
I + +EM S + PN + I+ G +G I A+ F + + Y +++DG
Sbjct: 465 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 524
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y KLG + +AV+ ++ + G+ P VT+ +I FCK K EA LLD + VP+
Sbjct: 525 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 584
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
S +++ CEEG + ++ + K P + ++ LCKEG++ E+ +L
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644
Query: 385 E-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ RG P +TYNT+I C++ +L +A +L + M++ ++P+ TYN+LI G C G
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 704
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
N K+ R+L + D+ K +++ +I+ G+
Sbjct: 705 NLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGD 740
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 194/379 (51%), Gaps = 2/379 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++ + G ++A F + K+ + V S N LL+ L + L F N
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEA-LEFTNDM 331
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
V P++ T NIL + GA +V+ M G+ P+LVT+T ++ G+ G+I
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNI 391
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E + ++ +L +G TYTVL+ K GR+ +AV ++ EME G++P+ +TY V+
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVL 451
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I CK EA L ++M ++ P+S +C +I L E+G + +A + + + +
Sbjct: 452 IHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDV 511
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+ + + +I K G I EA + + + E+G P+++T+N+LI G C+ +L EA +
Sbjct: 512 AEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK 571
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L D + G+ P TY L+ G+C+ G+ +L EM K P + +++++++GL
Sbjct: 572 LLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLC 631
Query: 476 ESGNEGEVGKVVSMATASG 494
+ G E +++ A G
Sbjct: 632 KEGRLHESVQLLKYMYARG 650
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 168/339 (49%), Gaps = 3/339 (0%)
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
Q++ D V + + +F P+V + N L+ CK V+ A M G++P++
Sbjct: 248 QSRLQDAVTFLRETGGEEFG--PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDV 305
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
++ +L G G +E A D+ + G PD TY +L +G+ LG ++ A KV+
Sbjct: 306 YSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQR 365
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M NG+ P+ VTY ++I C+ E+ L + ML + S ++ LC+ G+
Sbjct: 366 MLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR 425
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNT 399
+++A L + PD S +IH LCK G + EA +L++E I P+ +
Sbjct: 426 IDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSA 485
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+I+G+ E ++EA +D + + V + YN++I G+ K+GN E +R +++++KG
Sbjct: 486 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 545
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
P +F+ LI G + G E K++ G V +
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 584
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 40/366 (10%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +++ N+Q S+ + N+LL N R+ + N V N +T ILI
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLL----YNLRHTDIMWDVYNEIKASGVPQNEYTNPILI 242
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC++ ++ A+ L E P++V+ ++ G+ G ++ AK F ++ G +
Sbjct: 243 DGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLL 302
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD +Y +L+ G G + +A++ ++ME++GVEP+ VTY ++ F R L
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF---------RIL 353
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
G + A ++ +R+L PD + +I C+
Sbjct: 354 --------------------------GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 373 EGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G I E+ KL ++ +G S++TY L++ +C+S + EA L +M G++P++ T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y++LI G CK G +E I + EEM K +PN S +I GL+E G E T
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507
Query: 492 ASGSVE 497
S E
Sbjct: 508 KSDVAE 513
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 1/283 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P + T N LI CKK + A+++LD + G+VP VT+TT++ GY GD+ +
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ + P TYTV++ G K GRL ++V+++ M G+ P+++TY +I++F
Sbjct: 606 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 665
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK +A L + MLQ PS +I+ LC G ++DA L L ++
Sbjct: 666 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 725
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+TII C +G + A F + ERG S+ Y+ +I +C+ +T+A +
Sbjct: 726 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 785
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
M+ G+ P+ +++ F + G+ I M+ G P
Sbjct: 786 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 183/331 (55%), Gaps = 11/331 (3%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP---NVFTCNILIKALCKKDDVEGA 204
S+ + +L+ + ++K YDLV +F H +V ++++ NI+I LC+ A
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLF----HHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ V+ +M G P++VT ++++ G+ + +A + + + G+ PD Y ++DG
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K+G + DAV++ D ME +GV + VTY ++ C + +A L+ DM+ R VP+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
VID+ +EGK +A +L++ + R+ PD +++I+ LC G++ EAK++ D
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 385 -EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+G +P ++TYNTLI G C+S + E +L+ +M ++G+ + TYN +IQG+ + G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I M + PN ++S+L+ GL
Sbjct: 364 RPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 228/445 (51%), Gaps = 13/445 (2%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P I P+ R + + + ++ +++L +I + + + ++ K+A+++
Sbjct: 27 PVIVPFISRFWGRTFST---KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK 83
Query: 93 AFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
+D V SL ++ G +L+ VI R +A+ ++ KF + V
Sbjct: 84 NYDLVISLFHHMEV---CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140
Query: 151 SLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
++++L+N Q N+ +D + L+ K F+ P+V N +I CK V A+ + D
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M G+ + VT+ +++ G G +A R+ D++ R VP+ T+T ++D ++K G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ ++A+K+ +EM V+P+ TY +I C + EA+ +LD M+ + +P
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+I+ C+ +V++ +L++ + ++ + D +TII + G+ A+++F +
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD-- 376
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
S P++ TY+ L+ G+C + + +A L+++M + +E ++ TYN++I G CKIGN ++
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL 474
+ + KG P+ S++ +I G
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S++ L + + L+ ++ +I F VI + G+ A+K +
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V V + N+L+N L + R D M K +P+V T N LI CK
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVVTYNTLINGFCKSK 328
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---------- 249
V+ ++ EM G+V + +T+ TI+ GY G + A+ +F + R
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Query: 250 -----GWVP-----------------DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
W D TTY +++ G K+G + DA + + G++
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
P+ V+Y MI FC+ ++ ++ D+L RK
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKS-----DLLYRK 476
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 42/210 (20%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFL 138
TY+++I+ +++ D L E+ Q + G+ + + T+I+ Y AGRP+ A + F
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLV--GDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
R++ SR PN+ T +IL+ LC
Sbjct: 374 RMD---------------------------------SR------PNIRTYSILLYGLCMN 394
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
VE A+ + + M + ++ T+ ++ G G++E+A +F + +G PD +Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
T ++ G+ + + + + +M+++G+ P
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 200/400 (50%), Gaps = 11/400 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
AL F + + P+++H+ ++ + AR R F++ +L+ ++ + L I
Sbjct: 83 ALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAIL 142
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
R Y G+P AV+TFL + + + + + S NTLL+ L ++ R + H + + + +F
Sbjct: 143 AER-YASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRF 201
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P+ + NIL C K A+RVL EM G+ P +VT+ T+L GY I+ A
Sbjct: 202 R--PDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEA 259
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ R D +YT ++ G+ + G + A +V DEM GV PN TY +I+
Sbjct: 260 WEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQV 319
Query: 300 FCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK A + ++M++ P+ VI LC G +E A +R+
Sbjct: 320 FCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRA 379
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMC---ESAELTEAG 414
+ +I + C G+I + ++F + G +P+L TYN LI+ M +S +L AG
Sbjct: 380 SVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAG 439
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGN---AKEGIRI 451
+L +MVE+G P FT+N ++ G GN AK+ +R+
Sbjct: 440 KLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDILRM 479
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 144/295 (48%), Gaps = 3/295 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T IL + A+R M G+ +L + T+L +E A +
Sbjct: 134 PSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDL 193
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ R + PD +Y +L +GY R A++V+ EM G+EP VTY M++ + +
Sbjct: 194 LRTLKSR-FRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFR 252
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA +M +RK VI E G+V+ A ++ ++++ P+ A
Sbjct: 253 SNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVAT 312
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I CK+ + A +F+E R + P+++T+N +I G+C ++ A + M
Sbjct: 313 YNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERM 372
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
E G+ +V TYN++I+ FC G ++G+ + +M D C PN ++++LI ++
Sbjct: 373 GEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMF 427
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 156/314 (49%), Gaps = 8/314 (2%)
Query: 170 LMFKN-SRH--KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
L FK+ RH + P+ F + I A + D A ++ M S+ + P+ T +
Sbjct: 85 LFFKHLDRHLPSYTHSPSSFDHAVDIAA--RMRDFNSAWALVGRMRSLRLGPSPKTLAIL 142
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
Y G A R F + + G D ++ L+D K R+ A ++ ++
Sbjct: 143 AERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR-F 201
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ V+Y ++ +C K++ A +L +M+QR P+ ++ ++++A E
Sbjct: 202 RPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWE 261
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
+ + ++ C D +T+IH + G++ +AK++FDE + G P++ TYN LI C
Sbjct: 262 FYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFC 321
Query: 406 ESAELTEAGRLWDDMVEKGV-EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
+ + A ++++MV +GV PNV T+N++I+G C +G+ + + +E M + G +
Sbjct: 322 KKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASV 381
Query: 465 TSFSLLIEGLYESG 478
+++++I ++G
Sbjct: 382 QTYNVVIRYFCDAG 395
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 147/299 (49%), Gaps = 6/299 (2%)
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+PS P+ H + + D +A + G + P T +L + Y +G
Sbjct: 93 HLPSYTHSPSSFDHAVDIAARMR--DFNSAWALVGRMRSLRLGPSPKTLAILAERYASIG 150
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ AV+ M ++G+ + ++ +++ CK + A +LL L+ ++ P +
Sbjct: 151 KPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRT-LKSRFRPDTVSYN 209
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+ + C + + A + K ++++ P +T++ + +I EA + + E ++
Sbjct: 210 ILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKR 269
Query: 390 SIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+++Y T+I G E+ E+ +A R++D+MV++GV PNV TYN LIQ FCK + +
Sbjct: 270 KCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNA 329
Query: 449 IRILEEMLDKG-CFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLL 505
+ + EEM+ +G C PN +F+++I GL G+ E +G + M ++N ++
Sbjct: 330 VAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVI 388
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 2/232 (0%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ + V I A + S A L+ M + PS + + GK A
Sbjct: 101 PSSFDHAVDIAARMRDFNSAWA--LVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRT 158
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCES 407
+ + D +T++ LCK ++ A L + P ++YN L G C
Sbjct: 159 FLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLK 218
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
A R+ +MV++G+EP + TYN +++G+ + KE EM + C + S+
Sbjct: 219 KRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSY 278
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGAL 519
+ +I G E+G + +V G + + L ++ DS A+
Sbjct: 279 TTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAV 330
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 192/361 (53%), Gaps = 5/361 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G E A+K + + Q S+ S LL +L ++++ D+ +F + P++ T
Sbjct: 400 GNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEAN-GLRPDLIT 458
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ LI LCK+ +V+ AI + ++M S ++PN + H IL G +G I A+ F ++
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
D Y +++DGYIK G +AVK+ ++ + G+ P VT+ ++ FC +K
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+AR LLD + P++ ++++ CEEG ++ EL + K P + + +I
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638
Query: 368 HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK+ K+ E+ +L ++ + G P ++YNT+I C++ ++ +A +L+D M+ +E
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P TYN+LI GFC G+ K+ +L + ++ NK +++ +I+ +G+V K
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKA---HCAKGDVDKA 755
Query: 487 V 487
V
Sbjct: 756 V 756
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 238/495 (48%), Gaps = 48/495 (9%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRP 130
NF + TY+S+++ L R + + + E+K + P+ + ++ V+ R
Sbjct: 209 NFIVSIQTYNSLLYNL---RHSNIMWDVYNEIKVSGTPQSEYTSSI---VVDGLCRQSRF 262
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ AV F E Q SV S NT+++ + D+ F K ++P+ ++ NI
Sbjct: 263 QDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF-CMMLKHGLLPDAYSYNI 321
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LC + A+ + ++M + G+ P++VT+ + G+ G I A + +L +G
Sbjct: 322 LIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKG 381
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TYTVL+ G+ ++G + +A+K+ EM +G + + ++ V++ + CK ++ A
Sbjct: 382 PNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAF 441
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L +M P +I LC++G+V+ A L++++ +P++ I I+ L
Sbjct: 442 KLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501
Query: 371 CKEGKIWEAKKLFDEF------------------------------------ERGSIPSL 394
C++GKI +A+ FD E+G P++
Sbjct: 502 CEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTI 561
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+T+N+L+ G C + +L++A RL D + G+EPN TY L+ +C+ GN + + +L E
Sbjct: 562 VTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSE 621
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRI--VSD 511
M K P +++++I+GL + E +++ A G + + S+N ++ D
Sbjct: 622 MKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARD 681
Query: 512 LDSGAGALDELLVKN 526
+ D++L+ N
Sbjct: 682 MRKAFQLYDKMLLHN 696
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 180/378 (47%), Gaps = 40/378 (10%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ ++++ N S+++ N+LL N R+ + N + +T +I++
Sbjct: 198 ALFVLVKMKDLNFIVSIQTYNSLL----YNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVV 253
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC++ + A+ + P++V+ TI+ Y G ++ AK F +L G +
Sbjct: 254 DGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLL 313
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PDA +Y +L+ G G + +A+ + ++ME++G+EP+ VTY ++ + F A N+
Sbjct: 314 PDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNI 373
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ ML + P+ +I C+ G VE+A +L+K ++ S+ ++ LCK
Sbjct: 374 IQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCK 433
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN--- 428
++ A KLF E E G P L+TY+TLI G+C+ E+ +A L++ M + PN
Sbjct: 434 SRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLI 493
Query: 429 --------------------------------VFTYNMLIQGFCKIGNAKEGIRILEEML 456
+ YN++I G+ K GN +E +++ +++
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLG 553
Query: 457 DKGCFPNKTSFSLLIEGL 474
+KG P +F+ L+ G
Sbjct: 554 EKGISPTIVTFNSLMYGF 571
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P + T N L+ C + A R+LD + G+ PN VT+TT++ Y G++++
Sbjct: 557 ISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLL 616
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ + P TYTV++ G K +L ++ +++++M+ G+ P++V+Y +I+AF
Sbjct: 617 ELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAF 676
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + +A L D ML P+S +I+ C G ++DA L L + +
Sbjct: 677 CKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNK 736
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+TII C +G + +A F + E+G S+ Y+ +I +C+ +TEA +
Sbjct: 737 YAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCM 796
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
M+ GV P+ + +L+ F + G+ +L EM+ G
Sbjct: 797 MLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 4/267 (1%)
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
Y + +A V + D ++ TY L+ + D V +E++ +G
Sbjct: 188 AYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWD---VYNEIKVSGTPQ 244
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+E T ++++ C+ + +A D +++ PS ++ C+ G V+ A +
Sbjct: 245 SEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF 304
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCES 407
+L+ +PD + +IH LC G + EA L ++ E G P ++TYN L G
Sbjct: 305 CMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLL 364
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ A + M+ KG PN+ TY +LI G C+IGN +E +++ +EM+ G + S
Sbjct: 365 GLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISS 424
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
++L+ L +S K+ A+G
Sbjct: 425 TVLLGSLCKSRQVDVAFKLFCEMEANG 451
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED----------NGVEPNEVTYGVMIE 298
R W + +L Y + + DA+ V+ +M+D N + N +M +
Sbjct: 173 RSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWD 232
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + K SG Q +Y S V+D LC + + +DA ++ K P
Sbjct: 233 VYNEIKVSGTP--------QSEYTSSI-----VVDGLCRQSRFQDAVLFFQDTEGKEFQP 279
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+TI+ CK G + AK F + G +P +YN LI G+C + + EA L
Sbjct: 280 SVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLK 339
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+DM G+EP++ TYN+L +GF +G I+++ML KG PN ++++LI G +
Sbjct: 340 NDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQI 399
Query: 478 GNEGEVGKVVSMATASG 494
GN E K+ + G
Sbjct: 400 GNVEEALKLYKEMISHG 416
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 221/438 (50%), Gaps = 13/438 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR----ARAFDAVESLLT 102
+V + R +D A ++FH S N Y+++I+ L + RA+ +E + +
Sbjct: 51 IVDRLCRAGKVDEADELFHKM--IERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS 108
Query: 103 ELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ + I + T++ G+ A + F + V + N LL+AL +
Sbjct: 109 KGYEPDNIT-----YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKE 163
Query: 163 KRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ +FK KV P++ T N LI C+ + + A+++ ++ + G +P+ V
Sbjct: 164 GKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTV 223
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ +IL G + +++ A+ +F ++D G P+ TY++++ G+ ++G + +++ +EM
Sbjct: 224 TYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM 283
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ P+ + +I+ CK KK +A +L++M + VP ++D LC+ V
Sbjct: 284 TEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 343
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
+ A EL+ ++ C PD S +++ LCK K+ +A+ LFD ER +P ++T+N L
Sbjct: 344 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 403
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G+C++ +L EA L D M E V P+ T L+ G C+ E +R+ + M++KG
Sbjct: 404 MDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGT 463
Query: 461 FPNKTSFSLLIEGLYESG 478
+ ++++ GL G
Sbjct: 464 VADVLPHNIVLAGLCREG 481
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 199/405 (49%), Gaps = 41/405 (10%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I G+ A++ + + V V + +++ L + + D +F
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMI 72
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ N N LI LCK +++E A ++L+EM S G P+ +T+ TIL G G +
Sbjct: 73 ER-GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKV 131
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA---VKVMDEMEDNGVEPNEVTY 293
AK+ F + RG+ PD Y L+D K G++ +A K MD M D V P+ +TY
Sbjct: 132 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD-MADRKVAPDLITY 190
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I+ FC+ +K+ EA L D++ + Y+P + ++ L + +++A E++K+++
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 354 KNCMPDNAISS-----------------------------------TIIHWLCKEGKIWE 378
C P+ A S +I LCK K+ +
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310
Query: 379 AKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A K+ +E + G++P ++TYN L+ G+C++ + +A L+ MV+ G P++ +Y++++
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G CK + + + M+++ P+ +F++L++GL ++G E
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 415
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 219/465 (47%), Gaps = 48/465 (10%)
Query: 74 FSHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
F + TY +II L + A + VE + TE NP++ + ++ AG+
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEM-TEKGVNPDVA----TYTIIVDRLCRAGK 60
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ A + F ++ + + + N L+N L +++ + + + + K P+ T N
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK-GYEPDNITYN 119
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMG---------------------------------- 215
++ LC+ V A + D MPS G
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179
Query: 216 ---MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ P+L+T+ T++ G+ + A ++F D++ +G++PD TY ++ G + +
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 239
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A ++ +M D+G PN TY +++ C+ L ++M ++++ P LC VI
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
D+LC+ KV+DA ++ + + + +PD + ++ LCK + +A +LF + G
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P +++Y+ ++ G+C++ ++ +A L+D M+E+ + P+V T+N+L+ G CK G E +
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
L+ M + P+ + + L+ GL E ++ G+V
Sbjct: 420 LDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 172/327 (52%), Gaps = 4/327 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T + +I LCK V A+ +++EM G+ P++ T+T I+ G ++ A +
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++RG + Y L++G K + A K+++EM G EP+ +TY ++ C+
Sbjct: 68 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR--LLRKNCMPDN 360
K EA+ D M R Y P ++D L +EGKV +A L+K + + PD
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I C+ K EA KLF D +G +P +TYN+++ G+ + + EA ++
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
MV+ G PN TY++++ G C++GN + + EEM +K P+ + +I+ L ++
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307
Query: 480 EGEVGKVVSMATASGSV-ESDSWNFLL 505
+ KV+ + G+V + ++N LL
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILL 334
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 185/381 (48%), Gaps = 4/381 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I + + + A+K F + + N++L L + D MFK
Sbjct: 190 YNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 249
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
PN T +I++ C+ ++ + + +EM P+++ ++ +
Sbjct: 250 DS-GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKV 308
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A +V ++ G VPD TY +L+DG K + A ++ M DNG P+ V+Y V+
Sbjct: 309 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 368
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ CK K +AR L D M++RK VP ++D LC+ GK+++A +L + N
Sbjct: 369 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNV 428
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD +T++H LC++ + EA +LF E+G++ +L +N ++AG+C +L +A
Sbjct: 429 LPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALL 488
Query: 416 LWDDMVEKGVE--PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ MV+ E P+V TY L+ + G + + ++M GC P+ +++ L+ G
Sbjct: 489 FFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNG 548
Query: 474 LYESGNEGEVGKVVSMATASG 494
L + G + ++ G
Sbjct: 549 LRKQGRHIQADRLTQAMKEKG 569
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 144/272 (52%), Gaps = 3/272 (1%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G P++VT++TI+ G G + A + ++ ++G PD TYT+++D + G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A ++ +M + G N V Y +I CK + A LL++M + Y P +
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF---DEFE 387
++ LC GKV +A + + + + PD + ++ L KEGK+ EA LF D +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
R P L+TYNTLI G C + EA +L+ D++ KG P+ TYN ++ G + N E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ ++M+D GC PN ++S+++ G GN
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGN 272
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 143/250 (57%), Gaps = 3/250 (1%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
++G+ PD TY+ ++ G K G++T+A+++++EM + GV P+ TY ++++ C+ K
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L M++R ++ +I+ LC++ +E A +L + + K PDN +TI+
Sbjct: 63 EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD--DMVEKG 424
LC+ GK+ EAK+ FD RG P ++ YN L+ + + ++ EA L+ DM ++
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
V P++ TYN LI GFC++ E +++ ++++ KG P+ +++ ++ GL N E
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 485 KVVSMATASG 494
++ SG
Sbjct: 243 EMFKKMVDSG 252
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 191/402 (47%), Gaps = 15/402 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARA 93
K P + L+ R + D A+++F A + P+ TY+SI+ LAR
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTV----TYNSILLGLARKSN 237
Query: 94 FDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
D E + K+ + C N + V+ + G ++ + + + V
Sbjct: 238 MDEAEEMF---KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL 294
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +++ L + K+ D H + + K VP+V T NIL+ LCK + V+ A + M
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLE-EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G P++V+++ +L G + +A+ +F +++R VPD T+ +LMDG K G+L
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A ++D M ++ V P+ VT ++ C+ K++ EA L M+++ V V
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIV 473
Query: 332 IDLLCEEGKVEDACELWKRLLRKN--CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-R 388
+ LC EGK+ A +K +++ + PD +T+++ L + G++ +A F +
Sbjct: 474 LAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGS 533
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
G P + YNTL+ G+ + +A RL M EKG + F
Sbjct: 534 GCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M EKG EP+V TY+ +I G CK G E + ++EEM +KG P+ +++++++ L +G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
E ++ G S + ++N L+ + D
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKD 93
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 164/283 (57%), Gaps = 1/283 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LC K V A+RVL++M G+ + V TT++ G+ +GD+ A+R+F ++ RG
Sbjct: 328 VIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRG 387
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
D T+T L++G + G L +A +V+ EM D G++ + VTY V+I+ +CK EA
Sbjct: 388 LAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAF 447
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ ++M+ R+ P+ + D LC++G V A EL + K + +++I+ L
Sbjct: 448 RVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGL 507
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK G + +A ++ E E G + TY TLI +C+S E A + +M++KG++P++
Sbjct: 508 CKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSI 567
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
TYN+L+ GFC G + G ++LE ML+K PN +++ L++
Sbjct: 568 ATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK 610
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 202/407 (49%), Gaps = 13/407 (3%)
Query: 82 HSIIHK--LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
H+I+ K L+ R DA + E+ P++ + T++ Y + G E AVK
Sbjct: 258 HNILLKALLSAGRLKDACQHF-DEMSSPPDVVT----YGTMVHGYCVRGELENAVKLLDE 312
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY--DLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + ++ T + AL+ NK D + ++ + H + VFT +I C
Sbjct: 313 MAAKGLESNA-TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFT--TVISGFCS 369
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
K D+ A R+ +EM G+ + VTHT ++ G G+++ A RV +++D+G D T
Sbjct: 370 KGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVT 429
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YTVL+DGY K G + +A +V +EM V PN VTY + + CK A LL +M
Sbjct: 430 YTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + +I+ LC+ G +E A + + D +T+I LCK G+
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A + E ++G PS+ TYN L+ G C S + +L + M+EK V PNV TYN L+
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ +C N K I + M + PN+ ++++LI+G ++ N E
Sbjct: 610 KQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 166/327 (50%), Gaps = 13/327 (3%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
++ + P+ +CN ++ L ++ AI + E+P N+ +H +L + G ++
Sbjct: 221 QYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLKALLSAGRLK 272
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+A + F ++ PD TY ++ GY G L +AVK++DEM G+E N Y +I
Sbjct: 273 DACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVI 329
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
C + +A +L+DM + + VI C +G + A L++ + ++
Sbjct: 330 ALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA 389
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
D + +I+ LC+ G++ EA ++ E ++G ++TY LI G C+ + EA R+
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV 449
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
++MV + V PNV TY L G CK G+ + +L EM +KG N +++ LI GL +
Sbjct: 450 HNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCK 509
Query: 477 SGNEGEVGKVVSMATASGSVESDSWNF 503
GN + ++++ A+G +D + +
Sbjct: 510 FGNLEQAMRIMTEMEAAGH-RTDVYTY 535
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 170/365 (46%), Gaps = 2/365 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F TVI + G A + F ++K + + L+N L + + +
Sbjct: 359 VFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEM 418
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
K V +V T +LI CK+ ++ A RV +EM + PN+VT+T + G +GD
Sbjct: 419 VDKGLDV-DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD 477
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + ++ ++G + TY L++G K G L A+++M EME G + TY
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ CK + A N+L +ML + PS A +++ C G+VE +L + +L KN
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
P+ ++++ C + + +++ + P+ TYN LI G C++ + EA
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+M+EKG+ +Y+ LI+ K E ++M ++G +S ++
Sbjct: 658 YFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDIS 717
Query: 475 YESGN 479
+ N
Sbjct: 718 FNEDN 722
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++ L + A LL E+ N ++ + ++I G E A++
Sbjct: 461 NVVTYTALSDGLCKQGDVRAANELLHEM-CNKGLELNVYTYNSLINGLCKFGNLEQAMRI 519
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+E + V + TL++ L ++ +D H M + K + P++ T N+L+ C
Sbjct: 520 MTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK-GIKPSIATYNVLMNGFC 578
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
VEG ++L+ M + PN+VT+ +++ Y ++++ ++ + + P+
Sbjct: 579 MSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNEN 638
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+ G+ K + +A+ EM + G+ +Y +I K KK EAR D M
Sbjct: 639 TYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKM 698
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ +D+ E +E L L+
Sbjct: 699 RNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
NV+T N LI LCK ++E A+R++ EM + G ++ T+TT++ G+ + A +
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD------------------------ 279
++LD+G P TY VLM+G+ GR+ K+++
Sbjct: 556 QEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCID 615
Query: 280 -----------EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
M V PNE TY ++I+ CK + EA +M+++ +++
Sbjct: 616 KNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSY 675
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
+I LL ++ K +A + ++ + + + S + E + L DE
Sbjct: 676 SALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735
Query: 389 GS 390
S
Sbjct: 736 AS 737
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 183/331 (55%), Gaps = 11/331 (3%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP---NVFTCNILIKALCKKDDVEGA 204
S+ + +L+ + ++K YDLV +F H +V ++++ NI+I LC+ A
Sbjct: 9 SIVDFSKVLSKIAKSKNYDLVISLF----HHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 64
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ V+ +M G P++VT ++++ G+ + +A + + + G+ PD Y ++DG
Sbjct: 65 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 124
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K+G + DAV++ D ME +GV + VTY ++ C + +A L+ DM+ R VP+
Sbjct: 125 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 184
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
VID+ +EGK +A +L++ + R+ PD +++I+ LC G++ EAK++ D
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244
Query: 385 -EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+G +P ++TYNTLI G C+S + E +L+ +M ++G+ + TYN +IQG+ + G
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 304
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I M + PN ++S+L+ GL
Sbjct: 305 RPDAAQEIFSRMDSR---PNIRTYSILLYGL 332
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 210/397 (52%), Gaps = 10/397 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFL 138
+ ++ K+A+++ +D V SL ++ G +L+ VI R +A+
Sbjct: 13 FSKVLSKIAKSKNYDLVISLFHHMEV---CGIGHDLYSYNIVINCLCRCSRFVIALSVVG 69
Query: 139 RIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ KF + V ++++L+N Q N+ +D + L+ K F+ P+V N +I CK
Sbjct: 70 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR--PDVVIYNTIIDGSCK 127
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V A+ + D M G+ + VT+ +++ G G +A R+ D++ R VP+ T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T ++D ++K G+ ++A+K+ +EM V+P+ TY +I C + EA+ +LD M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ +P +I+ C+ +V++ +L++ + ++ + D +TII + G+
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307
Query: 378 EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+++F + S P++ TY+ L+ G+C + + +A L+++M + +E ++ TYN++I
Sbjct: 308 AAQEIFSRMD--SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 365
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G CKIGN ++ + + KG P+ S++ +I G
Sbjct: 366 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 402
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 205/432 (47%), Gaps = 16/432 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P + +++S I + +N DL + +FH+ H+ +Y+ +I+ L R F
Sbjct: 5 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEV--CGIGHDLYSYNIVINCLCRCSRFV 62
Query: 96 AVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
S++ ++ + P++ +L I + R A+ ++E+ + V
Sbjct: 63 IALSVVGKMMKFGYEPDVVTVSSL----INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 118
Query: 153 NTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
NT+++ + D V L + R + + T N L+ LC A R++ +M
Sbjct: 119 NTIIDGSCKIGLVNDAVELFDRMERDGVR--ADAVTYNSLVAGLCCSGRWSDAARLMRDM 176
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+VPN++T T ++ +V G A +++ ++ R PD TY L++G GR+
Sbjct: 177 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 236
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A +++D M G P+ VTY +I FCK K+ E L +M QR V + +
Sbjct: 237 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 296
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
I + G+ + A E++ R+ + P+ S +++ LC ++ +A LF+ ++ I
Sbjct: 297 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353
Query: 392 P-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ TYN +I GMC+ + +A L+ + KG++P+V +Y +I GFC+ +
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 413
Query: 451 ILEEMLDKGCFP 462
+ +M + G P
Sbjct: 414 LYRKMQEDGLLP 425
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 162/308 (52%), Gaps = 1/308 (0%)
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K+ H+ PN + N LI ALC ++ A L M G+ PN VT+ + G
Sbjct: 71 KSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGK 130
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G ++ A + G + G+ A T+ +++ K GR +A KVM+ M +EPN +T
Sbjct: 131 AGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILT 190
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+++ AFCK + EA + D M++ + P+ +++L C +++ A +L + +
Sbjct: 191 LNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMA 250
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELT 411
C P+ S ++ + G++ EA+ ++ G P+LL N +AG+C++ E+
Sbjct: 251 HSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMD 310
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A R M E+G N TYN L++GFCK+G E R+LEEM+ +G P+ T++S+LI
Sbjct: 311 LASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLI 370
Query: 472 EGLYESGN 479
+GL +G
Sbjct: 371 QGLCSAGQ 378
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 165/370 (44%), Gaps = 42/370 (11%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN--LVTHTTILGGYVWRGDIE 237
+ V + FT L+ C + + A R+++E GM P +V H +L G+ G ++
Sbjct: 9 EFVHSEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVD 68
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
AK + P++ +Y L+D GR+ +A + + M GV PN VTY M
Sbjct: 69 EAK---SHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMA 125
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
K EA L+ M + ++ V++ LC+ G+ ++AC++ + +L +N
Sbjct: 126 TGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIE 185
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P+ + I+H CK + EA + D E G P+++T+N L+ C + ++ A +L
Sbjct: 186 PNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKL 245
Query: 417 WDDMVEKGVEPNVFTYNMLIQ-----------------------------------GFCK 441
+ M +PN TY++++Q G CK
Sbjct: 246 LETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCK 305
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDS 500
G R L M ++GC N +++ L+EG + G E +V+ A GS+ +S +
Sbjct: 306 TGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTT 365
Query: 501 WNFLLTRIVS 510
++ L+ + S
Sbjct: 366 YSVLIQGLCS 375
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 192/426 (45%), Gaps = 47/426 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F H+ TY +++H A FD + L+ E K + + G + V+ N L G E
Sbjct: 10 FVHSEFTYGTLVHGHCLAGEFDEAKRLVEEFK-DTGMSPGS---LVVLHNLMLKGFSEAG 65
Query: 134 V--KTFLRIEKFNVQRSVRSLNTLLNAL-----VQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+ + + + + + S NTL++AL +Q R +L M K +V N
Sbjct: 66 FVDEAKSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREEL-QAMAKRGVAPNRVTYNAM 124
Query: 187 ------------------------------TCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
T N +++ LCK + A +V++ M +
Sbjct: 125 ATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNI 184
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN++T IL + E A + +++ G+ P T+ L++ + ++ A K
Sbjct: 185 EPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAK 244
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+++ M + +PN VTY +M++ F + + EAR L+ ++ Y P+ +C + LC
Sbjct: 245 LLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLC 304
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
+ G+++ A + + C + A ++++ CK G++ EA+++ +E GS+P
Sbjct: 305 KTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDST 364
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVE---PNVFTYNMLIQGFCKIGNAKEGIRIL 452
TY+ LI G+C + ++ A + V + VE P+ T+ LI+ C++G +L
Sbjct: 365 TYSVLIQGLCSAGQIEHAFMVMLQ-VTRAVESARPDPATFVKLIEKLCELGEMDRAALVL 423
Query: 453 EEMLDK 458
E M D+
Sbjct: 424 ERMGDE 429
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 218/445 (48%), Gaps = 46/445 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE---LKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ L + + F+ ++ E L+ +P E +++ G+ E A+
Sbjct: 299 TYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPS----EAAVSSLVEGLRKRGKVEEALNL 354
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ +F V ++ N L+++L + + +D L+F + K + PN T +ILI C
Sbjct: 355 VKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLF-DRMGKIGLCPNDVTYSILIDMFC 413
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNL-----------------------------------V 221
++ ++ A+ L EM MG+ P++ V
Sbjct: 414 RRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVV 473
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+T+++GGY +G I A R++ ++ +G VP T+T L+ G + G + DAVK+ EM
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ V+PN VTY VMIE +C+ +A L++M+++ VP + +I LC G+
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
+A L + NC + + ++H C+EGK+ EA + + RG L+ Y L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVL 653
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G + + L +M ++G++P+ Y +I K G+ KE I + M+++GC
Sbjct: 654 IDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 461 FPNKTSFSLLIEGLYESG--NEGEV 483
PN+ +++ +I GL ++G NE E+
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEI 738
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 230/497 (46%), Gaps = 54/497 (10%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---------NPE 109
L L+ F++ G H F H+ ++ +IH L +A F SLL L +
Sbjct: 86 LGLRFFNFLG-LHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDAL 144
Query: 110 IKCGEN-------LFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQ 161
C E F +I++Y + R V F + + K ++ VR+L+ LL+ LV+
Sbjct: 145 FSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVK 204
Query: 162 NKRYDLVHLMFKN--------------------------SRHKFKVVP--------NVFT 187
+ + L +F + SR K +V N+
Sbjct: 205 FRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVP 264
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+LI LCKK V A+ + ++ + P++VT+ T++ G + E + ++L
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEML 324
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ P + L++G K G++ +A+ ++ + + GV PN Y +I++ CKG+
Sbjct: 325 RLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFD 384
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L D M + P+ +ID+ C GK++ A ++ P +++I
Sbjct: 385 EAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ CK G I A+ L E + P+++TY +L+ G C ++ +A RL+ +M KG+
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIV 504
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+++T+ L+ G + G ++ +++ EM + PN+ +++++IEG E GN + +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564
Query: 487 VSMATASGSVESDSWNF 503
++ G V D++++
Sbjct: 565 LNEMIEKGIV-PDTYSY 580
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 216/482 (44%), Gaps = 44/482 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ M R+ LD AL + Y+S+I+ + A E
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFL--GEMIDMGLKPSVYPYNSLINGHCKFGDISAAE 457
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
SL+ E+ N +++ + +++ Y G+ A++ + + + S+ + TLL+
Sbjct: 458 SLMAEM-INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSG 516
Query: 159 LVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L + D V L + + ++ V PN T N++I+ C++ ++ A L+EM G+V
Sbjct: 517 LFRAGLIRDAVKLFTEMA--EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIV 574
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP-DATTYTVLMDGYIKLGRLTDAVK 276
P+ ++ ++ G G AK VF D L +G + YT L+ G+ + G+L +A+
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V +M GV+ + V YGV+I+ K K LL +M R P + +ID
Sbjct: 634 VCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLL 395
+ G ++A +W ++ + C+P+ + +I+ LCK G + EA+ L + G S+P+ +
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQV 753
Query: 396 -----------------------------------TYNTLIAGMCESAELTEAGRLWDDM 420
TYN LI G C + EA L M
Sbjct: 754 TYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRM 813
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ GV P+ TY +I C+ + K+ I + M +KG P++ +++ LI G +G
Sbjct: 814 IGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 481 GE 482
G+
Sbjct: 874 GK 875
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+LI K D + + +L EM G+ P+ V +T+++ GD + A ++ +++
Sbjct: 652 VLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G VP+ TYT +++G K G + +A + +M PN+VTYG ++ KG +
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKK 771
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L + + + + ++A +I C +G++E+A EL R++ PD +T+I
Sbjct: 772 AVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISE 831
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC+ + +A +L++ E+G P + YNTLI G C + E+ +A L ++M+ +G++PN
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPN 891
Query: 429 VFTYNMLIQ 437
T I
Sbjct: 892 TETSETTIS 900
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV-WRGDIENAK 240
VPN T +I LCK V A + +M VPN VT+ L GD++ A
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAV 773
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ IL +G + + TY +L+ G+ + GR+ +A +++ M +GV P+ +TY MI
Sbjct: 774 ELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISEL 832
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ +A L + M ++ P +I C G++ A EL +LR+ P+
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892
Query: 361 AISSTII 367
S T I
Sbjct: 893 ETSETTI 899
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++ N T N+LI+ C++ +E A ++ M G+ P+ +T+TT++ R D++ A
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI 842
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ + ++G PD Y L+ G G + A ++ +EM G++PN T
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 193/394 (48%), Gaps = 9/394 (2%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
HP++ H ++ I AR R F + L++ ++ + + F + Y G+P
Sbjct: 85 HPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMR-SCRLGPSPRTFAIIAERYAAMGKP 143
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
AV F+ + ++ + + S NT+L+ L ++KR ++ + +FK + KFK + + NI
Sbjct: 144 HRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKA--DCVSYNI 201
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ C A+ +L EM G+ PNL T+ +L GY G A F ++ R
Sbjct: 202 IVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRK 261
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
D TYT ++ G +G + A V ++M +GV P+ T+ +I+ CK A
Sbjct: 262 CDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAI 321
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ ++M++R YVP+S VI LC G+++ A EL +R+ +C P+ + +I +
Sbjct: 322 LIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYF 381
Query: 371 CKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMC---ESAELTEAGRLWDDMVEKGVE 426
C G+I + LF + G +P+L TYN LI M S L AG+L +MV++G
Sbjct: 382 CDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFL 441
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
P T+N ++ G GN IL L GC
Sbjct: 442 PRKLTFNRVLDGLLLTGNQDFAKEILS--LQGGC 473
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 144/278 (51%), Gaps = 2/278 (0%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A+ V M G +L + TIL +E A +F L + D +Y ++++
Sbjct: 146 AVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLF-KALKGKFKADCVSYNIIVN 204
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ + R A++++ EM + G+ PN TY +M+ + + ++ EA +M +RK
Sbjct: 205 GWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDI 264
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
VI L G+++ A ++ ++++ +P A + +I LCK+ + A +F
Sbjct: 265 DVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIF 324
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+E +RG +P+ +TYN +I G+C E+ A L + M + EPNV TYN+LI+ FC
Sbjct: 325 EEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDA 384
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
G ++G+ + ++M + C PN ++++LI ++ N
Sbjct: 385 GEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNS 422
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%)
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L+ M + PS + + GK A ++ + C D + +TI+ LC
Sbjct: 114 LVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLC 173
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
K ++ A LF + ++YN ++ G C +A + +MVE+G+ PN+ T
Sbjct: 174 KSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTT 233
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN+++ G+ + G E EM + C + +++ +I GL G V +
Sbjct: 234 YNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMV 293
Query: 492 ASGSVESDSWNFLLTRIVSDLDSGAGAL 519
G + S + L +I+ DS A+
Sbjct: 294 KDGVLPSVATFNALIQILCKKDSVENAI 321
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 217/464 (46%), Gaps = 45/464 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II+ L ++ A L EL +P++ + T+I + AG E A +
Sbjct: 83 TYNTIINGLCKSNELGAGMELFEELVKRGHHPDVV----TYNTLIDSLCKAGDLEEARRL 138
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-HLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ +V + + L+N L + R D L+ + +R V+PN+ T N + L
Sbjct: 139 HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 198
Query: 196 CKKDDV-----------EGAIRVL------------------------DEMPSMGMVPNL 220
CK+ +G++RV D+M + G VPN+
Sbjct: 199 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNV 258
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ ++ G +E A + ++D+G PD TY+VL+D + K R+ +A++++
Sbjct: 259 VTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 318
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G PN VT+ +I+ CK +SGEA + + R VP +I C+ G
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNT 399
E A L++ ++ KN PD +I LCK G++ A+ + D G P+++TYN
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+ G+C+S + E ++MV G P TY L+ C+ + ++++ ++ G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
P+ ++++L++GL++SG + V+ G + DS+ F
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTF 541
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 181/341 (53%), Gaps = 11/341 (3%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
RSV N +L +L + +F+ + V P + T N +I LCK +++ +
Sbjct: 42 SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+ +E+ G P++VT+ T++ GD+E A+R+ G + RG VP+ TY+VL++G
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161
Query: 266 IKLGRLTDAVKVMDEMEDNGVE--PNEVTYGVMIEAFCKGKKSGEA----RNLLDDMLQR 319
K+GR+ +A +++ EM + PN +TY ++ CK + EA R+L D L
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-- 219
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P + +ID LC+ G+ ++AC ++ +P+ + +++ LCK K+ A
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERA 277
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ + ++G P ++TY+ L+ C+++ + EA L M +G PNV T+N +I G
Sbjct: 278 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 337
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
CK + E +I ++ ++ P+K +F++LI G ++GN
Sbjct: 338 LCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 172/326 (52%), Gaps = 2/326 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V + N L+N L + + + H M ++ K V P+V T ++L+ A CK V+ A+ +
Sbjct: 257 NVVTYNALVNGLCKADKMERAHAMIESMVDK-GVTPDVITYSVLVDAFCKASRVDEALEL 315
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L M S G PN+VT +I+ G A ++ + +R VPD T+ +L+ G K
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G A + +EM ++P+ +T+G +I+ CK + AR++LD M P+
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++ LC+ G++E+ CE + ++ C+P++ ++++ LC+ + +A +L + +
Sbjct: 436 YNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLK 495
Query: 388 R-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
G P +TYN L+ G+ +S + +A + ++MV KG +P+ FT+ G + GN
Sbjct: 496 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLA 555
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIE 472
+ +L +L KG P+ T+ S +++
Sbjct: 556 GTMELLRVVLAKGMLPDATTCSSILD 581
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query: 366 IIHWLCKEGKIWEAKKLF-DEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ LC+ G+ A ++F E R G P+++TYNT+I G+C+S EL L++++V++
Sbjct: 51 VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKR 110
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G P+V TYN LI CK G+ +E R+ M +GC PN ++S+LI GL + G E
Sbjct: 111 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEA 170
Query: 484 GKVVSMAT 491
+++ T
Sbjct: 171 RELIQEMT 178
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLW-DDMVEKGVEPNVFTYNMLIQGFCKIGN 444
F R S S+ YN ++ +C + E A ++ +M GV P + TYN +I G CK
Sbjct: 37 FVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 96
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNF 503
G+ + EE++ +G P+ +++ LI+ L ++G+ E ++ ++ G V + +++
Sbjct: 97 LGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSV 156
Query: 504 LLTRI--VSDLDSGAGALDELLVKNC 527
L+ + V +D + E+ K+C
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSC 182
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 178/360 (49%), Gaps = 3/360 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ +F + + N L+++L+ R V +F+ P+V++ N++IK +C+
Sbjct: 208 KASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRV 267
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATT 257
V+ A+ +++ M G P+ VTH I+ G ++ V + G +P+ T
Sbjct: 268 GQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVT 327
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T ++ GY K G+L DA+ V ++M +G+ PN VTY V+I + K G A + M
Sbjct: 328 FTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT 387
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + P +ID C G+++DA +W + + P+ S IIH LCK+ +
Sbjct: 388 RLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSD 447
Query: 378 EAKKLFDEFE-RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA L +E R I P YN +I +C+ ++ EA + M EKG P+ +TY +L
Sbjct: 448 EAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 507
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G+C E I EM++ GC P+ + + I L ++G EV V+ +A+ S
Sbjct: 508 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLASGGAS 567
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F VI+ G+ + A++ R+ +F + N +++ L + H + + +
Sbjct: 257 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 316
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+PNV T +I CK +E A+ V ++M + G++PN VT+ ++ GY GD+
Sbjct: 317 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 376
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A V+ + PD T++ L+DGY + G+L DA+++ +M + ++PN T+ ++
Sbjct: 377 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 436
Query: 297 IEAFCKGKKSGEARNLLDDM-LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I + CK +S EA LL+++ L+ P + + VID+LC+ GKV++A + K + K
Sbjct: 437 IHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 496
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
C PD + +I C + +I EA F E E G P +T N I+
Sbjct: 497 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFIS 544
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 164/371 (44%), Gaps = 77/371 (20%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-------PSMGMVPNLVTHTT------ 225
+ P+ +C +I LC+ A+++ D+M P + LV+ T
Sbjct: 141 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 200
Query: 226 -----------------------ILGGYVWRGDIENAKRVFGD-ILDRGWVPDATTYTVL 261
++ + RG + + +F I DR + PD ++ V+
Sbjct: 201 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVV 260
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ G ++G++ A+++++ M + G P+ VT+ ++++ C+ + +L LQR
Sbjct: 261 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRR-LQRDG 319
Query: 322 V--PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
V P+ VI C+ GK+EDA ++ ++ MP+ + +I+ K G + A
Sbjct: 320 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 379
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+++ + R P ++T+++LI G C +L +A R+W DM + ++PNV+T++++I
Sbjct: 380 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 439
Query: 439 FCKIGNAKEGIRILEE------------------------------------MLDKGCFP 462
CK + E I +L E M +KGC P
Sbjct: 440 LCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 499
Query: 463 NKTSFSLLIEG 473
+K ++++LI G
Sbjct: 500 DKYTYTILIIG 510
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 37/296 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ I+ L R +L L+++ F +VI Y AG+ E A+ +
Sbjct: 291 THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVY-- 348
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
N +V + ++PN T N+LI K
Sbjct: 349 -----------------NDMVAS-----------------GIMPNTVTYNVLINGYGKVG 374
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A+ V +M + P++VT ++++ GY G +++A R++ D+ P+ T++
Sbjct: 375 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 434
Query: 260 VLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++ K R +A+ +++E+ + P Y +I+ CK K EA + M +
Sbjct: 435 IIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEE 494
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P +I C + ++ +A + ++ C PD+ + I L K G
Sbjct: 495 KGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 550
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRL---------------LRKNCMPDNAISST-- 365
PS+ C ++I +LC G+ DA +L+ ++ L +C N + ++
Sbjct: 145 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 204
Query: 366 -------------------IIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGM 404
++ L G++ + LF+ + +R P + ++N +I G+
Sbjct: 205 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 264
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CFPN 463
C ++ +A L + M E G P+ T+N+++ G C+ G +L + G C PN
Sbjct: 265 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 324
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGALD 520
+F+ +I G ++G + V + ASG + + ++N L+ V DL S
Sbjct: 325 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 384
Query: 521 ELLVKNC 527
++ C
Sbjct: 385 QMTRLRC 391
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
+T L+ P++ F ++I Y G+ + A++ + + + +Q +V + + ++++L
Sbjct: 386 MTRLRCPPDVV----TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 441
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ R D + + + P F N +I LCK V+ A + M G P+
Sbjct: 442 KQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 501
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
T+T ++ GY + I A F ++++ G PD+ T + +K G + VM
Sbjct: 502 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 559
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 188/388 (48%), Gaps = 38/388 (9%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P +KP P P R+ +I Q + LA +IF A PNF H+Y ++H +I KL AR
Sbjct: 4 PHVKPSPIG-SPSRVQKLIASQSDPLLAKEIFDLAS-LQPNFKHSYSSFHILILKLGWAR 61
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
F ++ LL LK + +LF +I YG A P+ A+KTF + +F+ + + L
Sbjct: 62 QFSLMQDLLMRLKSE-QYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHL 120
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N LL LV ++ Y S H++ V P+ + NIL+ A C D+ A + ++M
Sbjct: 121 NXLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMF 180
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD--------- 263
+ P++ ++ ++ G + + A + D+L++G+VPDA +YT L++
Sbjct: 181 KRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLK 240
Query: 264 --------------------------GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
G+ + GR DA KV+++M NG PN ++YG ++
Sbjct: 241 EAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLV 300
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
C EA+N +++ML + + P ++ +I+ C GK+E+ACE+ +LR
Sbjct: 301 SGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEA 360
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDE 385
II +C+ K+ + +FDE
Sbjct: 361 XHTETWVAIIPRICEVDKLVRMENIFDE 388
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GV P+ +Y +++ AFC A L + M +R P ++ LC + +V A
Sbjct: 148 GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRA 207
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAG 403
+L + +L K +PD +T+++ LC++ K+ EA KL + +G P ++ YNT+I G
Sbjct: 208 VDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILG 267
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C +A ++ +DM G PN+ +Y L+ G C G E +EEML KG P+
Sbjct: 268 FCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPH 327
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRI 508
+ F LI G G E +V+ G + +++W ++ RI
Sbjct: 328 FSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRI 373
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVLD 209
S TLLN+L + K+ + + R K K P++ N +I C++ A +VL+
Sbjct: 225 SYTTLLNSLCRKKKLKEAYKLL--CRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLE 282
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+MPS G PNL+++ T++ G +G + AK ++L +G+ P + + L++G+ +G
Sbjct: 283 DMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVG 342
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+L +A +V+ EM +G + T+ +I C+ K N+ D+ L+ + P++ L
Sbjct: 343 KLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLKLEITPNTRL 400
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 164/298 (55%), Gaps = 5/298 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P+V T L++ LC+ + A +L +P + N+V T++ G + G + A
Sbjct: 282 TPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKLARATE 337
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ + +G PD TY +LM G KLGR AV+++DEME+ G PN VTY ++ +FC
Sbjct: 338 LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 397
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ +AR +LD M + + +S +I L ++GK+++A L + + + C PD
Sbjct: 398 RNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDIC 457
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+TII+ LC ++ EA+ +F E G + + +TYNTLI + S E RL ++M
Sbjct: 458 TYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM 517
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
V G +V +YN LI+ CK GN + +LEEM+ KG PN S+++LI L ++G
Sbjct: 518 VLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAG 575
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 8/413 (1%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
+L + + HP S + I+ + A D +LL L ++ + +
Sbjct: 58 SLLLLDWYASSHPALSLSSLPLRPILASVGAAGDPDRALALLDSLPRSSRLPPLRESLLL 117
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+ GR + R +F V S RS N +L+ L + + L+++ +
Sbjct: 118 PLLRSLPPGRALHLLDQMPR--RFAVTPSFRSYNAVLSTLARADCHADALLLYRRML-RD 174
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+V P FT + +ALC+ A+ +L M G VP+ V + T++ V +G + A
Sbjct: 175 RVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEA 234
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++L G D T+ ++ G LG + +A +++D M +G P+ VTYG ++
Sbjct: 235 ATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRG 294
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ +++ EA +L + + V + VI EGK+ A EL++ + K C PD
Sbjct: 295 LCRTRQADEAYAMLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPD 350
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ ++H LCK G+ A ++ DE E+G P+++TY+TL+ C + +A + D
Sbjct: 351 VHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 410
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
M KG N YN +I K G E +R+++EM +GC P+ +++ +I
Sbjct: 411 QMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTII 463
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 172/329 (52%), Gaps = 2/329 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T NIL+ LCK A+R+LDEM G PN+VT++T+L + G ++A+ +
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 408
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +G+ ++ Y ++ K G+L +A++++ EM+ G +P+ TY +I C
Sbjct: 409 LDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN 468
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA ++ ++L+ V + +I L G+ ++ L ++ C D
Sbjct: 469 NDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVS 528
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I LCKEG + + L +E +G P+ +YN LI +C++ ++ +A L +M+
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+G+ P++ TYN LI G CK+G + +LE++ ++ P+ ++++LI +
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 648
Query: 482 EVGKVVSMATASGSVESD-SWNFLLTRIV 509
+ ++ A + G V ++ +W ++ V
Sbjct: 649 DASMLLDKAVSGGIVPNERTWGMMVQNFV 677
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 172/334 (51%), Gaps = 6/334 (1%)
Query: 112 CGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
C ++ I +GL GR AV+ +E+ ++ + +TLL++ +N +D
Sbjct: 347 CPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDAR 406
Query: 170 LMFKNSRHK-FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
M K F + N N +I AL K ++ A+R++ EM S G P++ T+ TI+
Sbjct: 407 AMLDQMSAKGFSM--NSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIY 464
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
++ A+ +FG++L+ G V + TY L+ + GR + +++ +EM +G
Sbjct: 465 HLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPL 524
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V+Y +I+A CK + LL++M+ + P++ +I+ LC+ GKV DA EL
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELS 584
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCES 407
K +L + PD +T+I+ LCK G A L ++ ++ P ++TYN LI+ C+
Sbjct: 585 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 644
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
L +A L D V G+ PN T+ M++Q F +
Sbjct: 645 RLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 219/446 (49%), Gaps = 32/446 (7%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+L P +V+++ N + L+ FH+ + H F H+ + S++++L R R F +++
Sbjct: 75 KLKPHHVVNLLDTHNNTESVLRFFHWVSRTH-FFKHDMSCFVSMLNRLVRDRLFVPADNV 133
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNAL 159
L I RN G R ++ I ++ ++ S +TLL
Sbjct: 134 RI-------------LMIKSCRNEGEVKR---VIQVLSEINTTYDFGYTLYSFSTLL--- 174
Query: 160 VQNKRYDL------VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+Q ++D+ V++ NS + PN+FT N +IK LC K V+ A ++ +
Sbjct: 175 IQLGKFDMDGLGRDVYIEMLNS----GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFH 230
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P+ T+T+++ G+ G+++ A +F ++ G P++ TY+ L++G GRL +
Sbjct: 231 YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEE 290
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ +++EM D G+EP Y + I + C +S EA LL M +R P+ +I
Sbjct: 291 AMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALIS 350
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIP 392
L +GK E A ++ ++L +P S +I+ L EG+ A +F+ S+P
Sbjct: 351 GLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLP 410
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ TYN +I G C + +A ++D M++ G PNV TYN++I + K G +R+L
Sbjct: 411 NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL 470
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESG 478
E M G + +++ LI G G
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGG 496
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 216/439 (49%), Gaps = 21/439 (4%)
Query: 47 LVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+S + R ++A+ ++H A P TY ++I++L F+ ++ +
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVPTAV----TYSALINQLYVEGRFETALTIFEWM 403
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ--- 161
+ + E + +I+ + G + A F ++ K +V + N +++ +
Sbjct: 404 LSHDSLPNTET-YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY 462
Query: 162 -NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
N L+ +M N + + +T LI + +E A + +EM G+ PN+
Sbjct: 463 MNNAMRLLEMMKGNG-----LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ I+ GY+ +++A +F +++ G VP + TY +++ G+ K R+++A +
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G+ PN +TY I+ CK ++ A + +M +R Y P+ +ID LC+EG+
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNT 399
EDA +RLL C P+ +T++ LC +G+ +EA +L + ++ G PS Y
Sbjct: 638 AEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRA 693
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+ G C++ E+ A +++D MV G +P + Y LI CK ++ + + ML K
Sbjct: 694 LLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKH 753
Query: 460 CFPNKTSFSLLIEGLYESG 478
++ +++L++GL + G
Sbjct: 754 WNSDEVVWTVLLDGLLKEG 772
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 222/447 (49%), Gaps = 17/447 (3%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+ NLDLA ++F K N TY ++I+ L + +L E+ + I+
Sbjct: 249 KNGNLDLAFEMFDRMVK--DGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI-DKGIEP 305
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV---- 168
+ + I + AGR AVK +++K +V++ L++ L ++ ++++
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
H M + +VP T + LI L + E A+ + + M S +PN T+ I+
Sbjct: 366 HKMLADG-----LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIK 420
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G+ G I+ A +F +L G P+ TY +++ Y K G + +A+++++ M+ NG++
Sbjct: 421 GFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKL 480
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ TY +I F +G K A +L ++M++ P+ +I+ KV+DA L+
Sbjct: 481 DTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF 540
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+++ +P + + +I K +I EA+ + ++G +P+++TY + I G+C++
Sbjct: 541 WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ A +++ +M ++ PN+ TY+ LI G C+ G A++ E +LD GC PN ++
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTY 656
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ L+ GL G E ++V G
Sbjct: 657 TTLVRGLCGKGRCYEADQLVESMKKKG 683
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 197/398 (49%), Gaps = 5/398 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++I L+R F+ + ++ + + + +I + GR E A+
Sbjct: 341 NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVT-YSALINQLYVEGRFETALTI 399
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + + + N ++ +F + K PNV T NI+I
Sbjct: 400 FEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF-DQMLKAGPSPNVITYNIIIHIYF 458
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ + A+R+L+ M G+ + T+ ++ G+ G +E+A +F ++++ G P+
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +++GY+ + ++ DA+ + +M ++G P+ TY +MI F K + EA N M
Sbjct: 519 TYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P+ ID LC+ G+ A +++ + +++ P+ S++I LC+EG+
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A++L D+ G P++ TY TL+ G+C EA +L + M +KG++P+ Y L+
Sbjct: 639 EDAERLLDD---GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALL 695
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G CK + ++I + M+ G P + + LI L
Sbjct: 696 VGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICAL 733
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 8/297 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I +R + SL E+ ++ I + +I Y + + A+ F +
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFNEMVEHG-ISPNVVTYNAIINGYLTVAKVDDALALFWK 542
Query: 140 -IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+E NV S + N +++ + R F K ++PNV T I LCK
Sbjct: 543 MVESGNVPSS-GTYNMMISGFSKTNRISEAE-NFCGKMVKQGLLPNVITYTSFIDGLCKN 600
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
A ++ EM PNL T+++++ G G E+A+R +LD G P+ TY
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDGCEPNVDTY 656
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
T L+ G GR +A ++++ M+ G++P+E Y ++ CK + A + D M+
Sbjct: 657 TTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVT 716
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ P + +I LC+ + A +++ +L+K+ D + + ++ L KEG+
Sbjct: 717 TGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGE 773
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGM 404
+++ +L P+ + +I LC +GK+ EA+ + F G+ P TY +LI G
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C++ L A ++D MV+ G +PN TY+ LI G C G +E + +LEEM+DKG P
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++++ I L ++G E K++ G
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRG 337
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 137/310 (44%), Gaps = 8/310 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S R L+ A +F+ S N TY++II+ D +L ++ +
Sbjct: 488 LISGFSRGGKLEHAFSLFNEM--VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + + +I + R A ++ K + +V + + ++ L +N R
Sbjct: 546 SGNVP-SSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
L +F + K PN+ T + LI LC++ E A R+LD+ G PN+ T+TT+
Sbjct: 605 LAFKIFHEMK-KRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTL 659
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G +G A ++ + +G P Y L+ G K + A+K+ D M G
Sbjct: 660 VRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGF 719
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+P Y +I A CK +A+ + ML++ + + ++D L +EG+ + + E
Sbjct: 720 QPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLE 779
Query: 347 LWKRLLRKNC 356
L + +NC
Sbjct: 780 LLHVMESRNC 789
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ CK +VE A+++ D M + G P L + ++ + A+ +F +L +
Sbjct: 694 LLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKH 753
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
W D +TVL+DG +K G +++++ ME N
Sbjct: 754 WNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLN 792
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 221/444 (49%), Gaps = 19/444 (4%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R ++++L L+ F + + + N Y S++ LAR+R F +E +L ++
Sbjct: 69 RIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPT 128
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
E + I VI+ Y +G E A++ + + K + V + N+LLN LV+ R +
Sbjct: 129 REAMSI-VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIE----- 182
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+ FTC I++K LCK+ +E +++++ G +PN++ + T++ GY
Sbjct: 183 ----------IARKFTC-IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYC 231
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+GD+E A +F ++ +G++P TY +++G+ K G +++ EM G+ N
Sbjct: 232 KKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQ 291
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y +I+A K +A ++ M++ P +I C +GKV +A +L ++
Sbjct: 292 VYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQA 351
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAEL 410
L K MP+ + +IH CK+G A L + ERG P L+TY L+ G+ + E+
Sbjct: 352 LGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEV 411
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A + + M+E+GV P+ YN+L+ G CK +L EMLD+ P+ ++ L
Sbjct: 412 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 471
Query: 471 IEGLYESGNEGEVGKVVSMATASG 494
++G +GN E K+ + G
Sbjct: 472 VDGFIRNGNLDEARKLFELTIEKG 495
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 201/425 (47%), Gaps = 24/425 (5%)
Query: 60 ALQIFHYAGKFHPNFSH--NYDTYHSIIHKLAR---ARAFDAV-------ESLLTELKQN 107
AL+++++ K + F ++ +++ KL R AR F + E L E ++
Sbjct: 148 ALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKL 207
Query: 108 PEIKCGEN------LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
E + G+ + T+I Y G E+A F+ ++ +V + ++N +
Sbjct: 208 IEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 267
Query: 162 NKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
+ + LM NSR + NV N +I A K + A+ ++ M G P+
Sbjct: 268 KGDFKAIDRLLMEMNSR---GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD 324
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+VT+ T++ G G + A ++ L +G +P+ +YT L+ Y K G A +
Sbjct: 325 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLI 384
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
EM + G +P+ VTYG ++ + A + + ML+R P + + ++ LC++
Sbjct: 385 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF 444
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYN 398
K+ A L +L ++ +PD + +T++ + G + EA+KLF+ E+G P ++ YN
Sbjct: 445 KLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYN 504
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
+I G C+ + +A + M ++ + P+ FTY+ +I G+ K + ++ EM+
Sbjct: 505 AMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM 564
Query: 459 GCFPN 463
C PN
Sbjct: 565 KCKPN 569
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 1/249 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T N LI C+ V A ++L++ G++PN ++T ++ Y +G + A
Sbjct: 323 PDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNW 382
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ +RG PD TY L+ G + G + A+ + ++M + GV P+ Y +++ CK
Sbjct: 383 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 442
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K A+ LL +ML + +P + + ++D G +++A +L++ + K P
Sbjct: 443 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVG 502
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I CK G + +A + ++ + P TY+T+I G + +L A +++ +MV
Sbjct: 503 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 562
Query: 422 EKGVEPNVF 430
+ +PNV
Sbjct: 563 KMKCKPNVM 571
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 236/516 (45%), Gaps = 50/516 (9%)
Query: 53 RQQNLDLALQIFHYAGKFHP--NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN--- 107
++++LD A ++F K P N Y +IH L R D L ++K +
Sbjct: 265 QRKDLDSAFKVF----KEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCY 320
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
P ++ + +I+ + R A+ +E+ ++ ++ + L+++L + +
Sbjct: 321 PTVR----TYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ K ++PNV T N LI CK+ +E A+ V++ M S + PN T+ ++
Sbjct: 377 ARELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435
Query: 228 GGYVWR----------------------------------GDIENAKRVFGDILDRGWVP 253
GY R G+ ++A R+ + DRG VP
Sbjct: 436 KGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TYT ++D K R+ +A + D +E V PN V Y +I+ +CK K EA +L
Sbjct: 496 DPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLML 555
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ ML + +P+S +I LC +GK+++A L +++++ + P + + +IH L K+
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKD 615
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G A + F + G+ P TY T I C L +A + M E GV P++FTY
Sbjct: 616 GDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTY 675
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+ LI+G+ +G +L+ M D GC P++ +F LI+ L E G +
Sbjct: 676 SSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVM 735
Query: 493 SGSVESDSWNFLLTRIVSD-LDSGAGALDELLVKNC 527
S +E D LL ++V + A + ++L++ C
Sbjct: 736 SNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGIC 771
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 180/328 (54%), Gaps = 7/328 (2%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
NTLLN+L R+ LV M + KV PN++T N ++ CK +VE A + +
Sbjct: 187 NTLLNSLA---RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSM 243
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ G+ P+ T+T+++ GY R D+++A +VF ++ +G + YT L+ G R
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR 303
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A+ + +M+D+ P TY V+I+A C ++ EA NL+ +M ++ P+
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+ID LC + K+E A EL ++L K MP+ + +I+ CK G I +A + + E R
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+ TYN LI G C+ + +A + + M+E+ V P+V TYN LI G C+ GN
Sbjct: 424 LRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYES 477
R+L M D+G P+ +++ +I+ L +S
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKS 510
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 168/339 (49%), Gaps = 3/339 (0%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
DL M K+ + K + N L+ +L + V+ +V EM + PN+ T+
Sbjct: 164 DLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ GY G++E A + I++ G PD TYT L+ GY + L A KV EM G
Sbjct: 224 MVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG 283
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
NEV Y +I C ++ EA +L M P+ +I LC + +A
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGM 404
L K + K P+ + +I LC + K+ +A++L + E+G +P+++TYN LI G
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ + +A + + M + + PN TYN LI+G+CK N + + +L +ML++ P+
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDV 462
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+++ LI+G SGN +++S+ G V D W +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV-PDPWTY 500
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 196/449 (43%), Gaps = 57/449 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+I R+ FD+ LL+ L + + + ++I + + R E A F
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLS-LMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ +V +V L++ + + + HLM + K +PN T N LI LC
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK-NCLPNSLTFNALIHGLCTDG 581
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + ++M + + P + T T ++ + GD ++A R F +L G PDA TYT
Sbjct: 582 KLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYT 641
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+ Y + GRL DA ++ +M++NGV P+ TY +I+ + ++ A +L M
Sbjct: 642 TFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDT 701
Query: 320 KYVPSSALCCKVIDLLCE--EGKVEDA----------------CELWKRLLRKNCMPDNA 361
PS +I L E GKV+ EL ++++ P+
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAK 761
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++ +C+ G + A+K+FD ++ G PS L +N L++ C+ + EA ++ DD
Sbjct: 762 SYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDD 821
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD---------------------- 457
M+ G P + + +LI K G + G + + +L
Sbjct: 822 MICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGL 881
Query: 458 -------------KGCFPNKTSFSLLIEG 473
GC + ++SLLIEG
Sbjct: 882 VEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 182/332 (54%), Gaps = 2/332 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+V+ K+YD+V + K + +++T NI+I C V A+ +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKK-MEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P+ VT +++ G+ R + +A + +++ G+ PD Y ++D K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
R+ DA E+E G+ PN VTY ++ C + +A LL DM+++K P+
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EF 386
++D + GKV +A EL++ ++R + PD S++I+ LC +I EA ++FD
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G + +++YNTLI G C++ + + +L+ +M ++G+ N TYN LIQGF + G+
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +M G P+ ++++L+ GL ++G
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
T L + N DL M K+ + P++ N L+ A+ K + I + +M
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKS-----RPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+G+ +L T ++ + + A + G +L G+ PD T L++G+ + R++D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
AV ++D+M + G +P+ V Y +I++ CK K+ +A + ++ ++ P+ +++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
LC + DA L +++K P+ S ++ K GK+ EAK+LF+E R SI P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++TY++LI G+C + EA +++D MV KG +V +YN LI GFCK ++G+++
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
EM +G N +++ LI+G +++G+ + + S G + D W +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTY 403
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 226/457 (49%), Gaps = 7/457 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+RL R L+ A+ +F K P F D ++ ++ + + + +D V SL ++
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRP-FPSIVD-FNRLLSAIVKLKKYDVVISLGKKM 111
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ I+ F VI + + LA+ ++ K + ++ +L+N + R
Sbjct: 112 -EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 165 Y-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D V L+ K +K P++ N +I +LCK V A E+ G+ PN+VT+
Sbjct: 171 VSDAVSLVDKMVEIGYK--PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T ++ G +A R+ D++ + P+ TY+ L+D ++K G++ +A ++ +EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
++P+ VTY +I C + EA + D M+ + + +I+ C+ +VED
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
+L++ + ++ + + +T+I + G + +A++ F + + G P + TYN L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ EL +A +++DM ++ ++ ++ TY +I+G CK G +E + + KG P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
+ +++ ++ GL G EV + + G +++D
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 172/351 (49%), Gaps = 2/351 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+++ + R AV ++ + + + + N ++++L + KR + FK K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PNV T L+ LC A R+L +M + PN++T++ +L +V G +
Sbjct: 220 -GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK +F +++ PD TY+ L++G R+ +A ++ D M G + V+Y +I
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK K+ + L +M QR V ++ +I + G V+ A E + ++ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLW 417
D + ++ LC G++ +A +F++ ++ + ++TY T+I GMC++ ++ EA L+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ KG++P++ TY ++ G C G E + +M +G N + S
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 19/336 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY ++++ L + + LL+++ K P + L ++N G+ A
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN----GKVLEA 279
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + + ++ + + ++L+N L + R D + MF K + +V + N LI
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLIN 338
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE +++ EM G+V N VT+ T++ G+ GD++ A+ F + G P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY +L+ G G L A+ + ++M+ ++ + VTY +I CK K EA +L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + P ++ LC +G + + L+ ++ ++ M ++ S +
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------D 510
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESA 408
G I + +L + G PSLL + +G+C+ A
Sbjct: 511 GDITLSAELIKKMLSCGYAPSLL--KDIKSGVCKKA 544
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 165/323 (51%), Gaps = 4/323 (1%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LCKK + A+ + EM G P+ T+ ++ G +E + ++ RG+
Sbjct: 98 INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P TYT L+ G+ GR+ A+ ++DEME G+ PN VTY +I+ C + A
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAIL 217
Query: 312 LLDDMLQR--KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L +M R + P+ ++I LC++G E E ++ C P+NA + +IH
Sbjct: 218 VLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHG 277
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC++G EA L +E G ++ YN+LI G+C+ EL A + MVEKGV P+
Sbjct: 278 LCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPD 337
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
VFTY LIQG C G E + +++EM KG PN +++ LI G ++ ++V+
Sbjct: 338 VFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVN 397
Query: 489 MATASGSVES-DSWNFLLTRIVS 510
++G + + D + L + S
Sbjct: 398 EMKSNGLMPAGDIYKILFKSLYS 420
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 176/354 (49%), Gaps = 8/354 (2%)
Query: 129 RPELAVKTFLRIEK---FNVQRS-VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN 184
R + + LRI + N Q + V S + +N L + + +F+ K P+
Sbjct: 67 RRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSA-PD 125
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
FT NILI LCK +E + ++DEM + G P +VT+TT++ G+ G ++ A +
Sbjct: 126 SFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILD 185
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE--PNEVTYGVMIEAFCK 302
++ RG P+ TYT L+ G G + A+ V+ EM+ G E PN VTY +I C+
Sbjct: 186 EMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQ 245
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
LD+M+ P++A +I LC++G +A L ++ C D I
Sbjct: 246 KGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVI 305
Query: 363 SSTIIHWLCKEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I LCK G++ A+++ E+G P + TY +LI G+C++ L EA L +M
Sbjct: 306 YNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMR 365
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
KG+ PN TY LI GF + ++++ EM G P + +L + LY
Sbjct: 366 AKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 7/294 (2%)
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
R I ++ R++ L D +Y+ ++G K G++ +A+++ EME+ G P+ T
Sbjct: 69 RRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFT 128
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++I CK + +L+D+M R + P+ +I C G+V+ A ++ +
Sbjct: 129 YNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEME 188
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGS--IPSLLTYNTLIAGMCESAE 409
+ P+ + +I LC G++ A + E + RG+ P+++TY LI G+C+
Sbjct: 189 HRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGL 248
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
D+M+ G PN TY LI G C+ G+ E +L EM+ GC + ++
Sbjct: 249 FEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNS 308
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
LI+GL + G E + + + + V D + + T ++ L AG LDE L
Sbjct: 309 LIDGLCKMG-ELDFAREMQILMVEKGVAPDVFTY--TSLIQGL-CDAGLLDEAL 358
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I+ L + + SL+ E++ +P + + T+I + AGR + A+
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVT----YTTLIHGFCTAGRVDAAMDI 183
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF-KVVPNVFTCNILIKAL 195
+E + + + L+ L + L+ K + + + PNV T LI L
Sbjct: 184 LDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGL 243
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+K E + LDEM G PN T+T ++ G +G A + +++ G D
Sbjct: 244 CQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDV 303
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+DG K+G L A ++ M + GV P+ TY +I+ C EA L+ +
Sbjct: 304 VIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQE 363
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
M + VP+S +I+ + + + A +L + MP I + L
Sbjct: 364 MRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 4/253 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
FS TY ++IH A DA +L E++ I + +I+ G E A
Sbjct: 157 FSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHR-GITPNTVTYTALIQGLCDCGEVERA 215
Query: 134 VKTF--LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+ +++ +V + L++ L Q +++ + F + PN T L
Sbjct: 216 ILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEM-GMEFLDEMIISGCFPNNATYTAL 274
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LC+K A +L+EM ++G ++V + +++ G G+++ A+ + ++++G
Sbjct: 275 IHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGV 334
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TYT L+ G G L +A+ +M EM G+ PN VTY +I F + ++ A
Sbjct: 335 APDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQ 394
Query: 312 LLDDMLQRKYVPS 324
L+++M +P+
Sbjct: 395 LVNEMKSNGLMPA 407
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +IH L + F+ L E+ + C N +GL +
Sbjct: 232 NVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS---GCFPNNATYTALIHGLCQKGSFLEAA 288
Query: 137 FLRIEKFNV--QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
L E + + V N+L++ L + D M K V P+VFT LI+
Sbjct: 289 VLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK-GVAPDVFTYTSLIQG 347
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LC ++ A+ ++ EM + G+VPN VT+TT++ G+ ++A ++ ++ G +P
Sbjct: 348 LCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPA 407
Query: 255 ATTYTVL 261
Y +L
Sbjct: 408 GDIYKIL 414
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 201/392 (51%), Gaps = 6/392 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F + N S+ L +ALV+ K Y V + K + +V + ILI
Sbjct: 75 ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMA-GISHDVLSLTILI 133
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C+ V+ VL ++ +G+ PN++T +T++ G+ G I A +F ++ RG+
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYK 193
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ +Y++++ G ++G+ T+ +K+++ M+ G EP+ V Y +++ CK + EA ++
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M +P+ +I L G+ ++A L + N MPD S +I +CK
Sbjct: 254 FCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCK 313
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG++ EA+ + E G P + TYNTL+ G C E+ EA ++++ M+ KG P+VF+
Sbjct: 314 EGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFS 373
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+++L+ G+CK E ++ +EM +G P+ S++ LI GL ++ E ++
Sbjct: 374 FSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMH 433
Query: 492 ASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
++G N + I+ D S G LD+ +
Sbjct: 434 SNGY----PPNLVTYSILLDCLSKQGYLDQAM 461
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 202/385 (52%), Gaps = 8/385 (2%)
Query: 139 RIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+I K ++ +V + +TL+N ++ K + L +K PNV + +I+IK LC+
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYK--PNVHSYSIIIKGLCR 208
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
I++L+ M +G P++V + TI+ + A +F + G +P T
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT L+ G LGR +A +++EM+ + P+ V + V+I+ CK + EAR +L M
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P A +++ C +V +A ++++ ++ K MPD S +++ CK +I
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EAK+LFDE RG IP ++YNTLI+G+C++ EA L+ DM G PN+ TY++L+
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
K G + + + M + G P+ +++++I+G+ + G + ++ + + G +
Sbjct: 449 DCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG-L 507
Query: 497 ESDSWNFLLTRIVSDLDSGAGALDE 521
+ ++W + T + + G G LDE
Sbjct: 508 QPNNW--VCTPTIDGVCKG-GLLDE 529
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 175/357 (49%), Gaps = 7/357 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPE 131
+ N +Y II L R V LL +K + C ++ I T++
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKV---VGCEPDVVIYNTIVDRLCKDRLVN 248
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
AV F +++ + +V + +L++ L R+ + N ++P++ ++L
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLL-NEMKGGNIMPDLVAFSVL 307
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I +CK+ +V A +L M MG+ P++ T+ T++ GY R ++ A++VF ++ +G
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+PD ++++L++GY K R+ +A ++ DEM G+ P+ V+Y +I C+ ++ EA
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L DM Y P+ ++D L ++G ++ A L++ + PD + +I +C
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMC 487
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
K GK +A++LF E +G P+ I G+C+ L EA + + M + P
Sbjct: 488 KYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 45/388 (11%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNS 175
F T+I + + G+ A++ F + + +V S + ++ L + K +++ L+
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLL---- 219
Query: 176 RHKFKVV---PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV- 231
KVV P+V N ++ LCK V A+ + +M G++P +VT+T+++ G
Sbjct: 220 -EHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRN 278
Query: 232 ---WR-------------------------------GDIENAKRVFGDILDRGWVPDATT 257
W+ G++ A+ + + + G PD T
Sbjct: 279 LGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVAT 338
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y LM+GY + +A KV + M G P+ ++ +++ +CK K+ EA+ L D+M
Sbjct: 339 YNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMT 398
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R +P + +I LC+ + +A EL+K + P+ S ++ L K+G +
Sbjct: 399 HRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLD 458
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A LF E + P L+TYN +I GMC+ + +A L+ ++ KG++PN + I
Sbjct: 459 QAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTI 518
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNK 464
G CK G E + +M C P +
Sbjct: 519 DGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 72/344 (20%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+I +A F +++ +P + L +++ V + +ME G+ + ++
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 295 VMIEAFCK-----------GK------------------------KSGEARNLLDDMLQR 319
++I FC+ GK K G A L D M+ R
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
Y P+ +I LC GK + +L + + C PD I +TI+ LCK+ + EA
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAG----------------------------------- 403
+F + + G +P+++TY +LI G
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
MC+ E++EA + M E GVEP+V TYN L+ G+C E ++ E M+ KG P+
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLT 506
SFS+L+ G ++ E ++ T G + ++ S+N L++
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLIS 414
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 195/398 (48%), Gaps = 39/398 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +IIH L R VESLL E+ R GL+
Sbjct: 153 TYGAIIHWLGRKGDLTKVESLLGEM-----------------RARGLS------------ 183
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+V+ NT++NAL + + M N K + P+V T N +I C++
Sbjct: 184 -------PNVQIYNTVINALCKCRSASQASDML-NQMVKSRFNPDVVTFNTMIAGFCREG 235
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
DV A+++L E G+ PN +++T ++ G+ RG+ A + +++ RG PD T
Sbjct: 236 DVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLG 295
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G + G++ DA+ V ++M + V P+ Y V+I CK + A+NLL++ML++
Sbjct: 296 ALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQ 355
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
K P + +ID K+ DA ++++ + K C PD + +I CK G + EA
Sbjct: 356 KVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEA 414
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ G IP TY TL+ G + +++ + RL DM+++ +PN+FTY LI G
Sbjct: 415 VTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICG 474
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+C IG+ + +M +G FPN +++LI L++
Sbjct: 475 YCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFK 512
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 151/297 (50%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV N +I ALCK A +L++M P++VT T++ G+ GD+ A ++
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ + RG P+ +YT L+ G+ G A ++ EM G P+ +T G +I
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A + + M +R+ +P + + +I LC++ + A L + +L + PD I
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFI 363
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+T+I + K+ +A+K+F+ E + P ++ YN +I G C+ + EA M +
Sbjct: 364 YTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRK 423
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G P+ FTY L+ G+ K G+ +R+L +M+ + C PN +++ LI G G+
Sbjct: 424 AGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGD 480
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
TC ++++ LC + VE +++ G VP V + ++ GY RGDI + G++
Sbjct: 84 TC-VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEM 142
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+G +P TY ++ + G LT ++ EM G+ PN Y +I A CK + +
Sbjct: 143 ETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSA 202
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A ++L+ M++ ++ P +I C EG V +A +L + +R+ P+ + +
Sbjct: 203 SQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPL 262
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
IH C G+ A L E RG P ++T LI G+ S ++ +A + + M E+ V
Sbjct: 263 IHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQV 322
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+ YN+LI G CK +LEEML++ P+K ++ LI+G S + K
Sbjct: 323 MPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARK 382
Query: 486 VVSMATASGSVESDSWNFLL 505
+ + ++N ++
Sbjct: 383 IFEFMEEKACPDIVAYNVMI 402
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 203/459 (44%), Gaps = 52/459 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIK---------CGEN------ 115
S N Y+++I+ L + R+ +L ++ + NP++ C E
Sbjct: 182 LSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREAL 241
Query: 116 -LFITVIRN-------------YGLAGRPELAVKTFLRIEKFNVQRS--VRSLNTLLNAL 159
L IR +G R E V + L +E + + +L L++ L
Sbjct: 242 KLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGL 301
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V + + + L+ + + +V+P+ N+LI LCKK + A +L+EM + P+
Sbjct: 302 VVSGQVNDA-LIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPD 360
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+TT++ G+V + +A+++F + ++ PD Y V++ GY K G + +AV M
Sbjct: 361 KFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMS 419
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
M G P+E TY +++ + K + LL DM++R+ P+ +I C G
Sbjct: 420 SMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIG 479
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
A +L+ ++ + P+ + +I L K+ K+ +A F+ P + T +
Sbjct: 480 DTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVH 539
Query: 399 TLIAGMC------------ESAELTEAGRLWD---DMVEKGVEPNVFTYNMLIQGFCKIG 443
L+ G+ ++ + E L D ++ G++P + YN +I C+
Sbjct: 540 YLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHN 599
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ + + ++M +KGC P+ +F L+ G +G G+
Sbjct: 600 MLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGK 638
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 173/331 (52%), Gaps = 2/331 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+VF N +I CK D V+ A +VLD M G P++VT+ ++G + RG ++ A RV
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L P TYT+L++ I G + +A+K++DEM G+ P+ TY V++ CK
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A L + + V + ++ L EGK E +L +L K C P+
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
ST+I LC++GKI EAK + E+ P +Y+ LI+ +C ++ A DDM+
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE- 480
G P++ +YN ++ CK GNA E + I E++ + GC PN S++ L L+ SG++
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443
Query: 481 GEVGKVVSMATASGSVESDSWNFLLTRIVSD 511
+G ++ M + + ++N L++ + D
Sbjct: 444 RALGMILEMLSNGIDPDEITYNSLISCLCRD 474
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 194/420 (46%), Gaps = 38/420 (9%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
VI + A R + A K R++K + V + N L+ R DL L + K
Sbjct: 151 AVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA-LRVMDQLLK 209
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
P V T ILI+A + ++ A+++LDEM S G+ P+ T+ ++ G G ++
Sbjct: 210 DNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDR 269
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A I G V +TY +L+ + G+ K+M +M G EPN +TY +I
Sbjct: 270 AFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLIT 329
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A C+ K EA+N+L M ++ P +I LC EGKV+ A E ++ +P
Sbjct: 330 ALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP 389
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-------------------------------- 386
D ++I+ LCK G EA +F++
Sbjct: 390 DILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMI 449
Query: 387 ----ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE-KGVEPNVFTYNMLIQGFCK 441
G P +TYN+LI+ +C + +A L DM E + +P V +YN ++ G CK
Sbjct: 450 LEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCK 509
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
+ + I +L M+++GC PN+T+++LLI+G+ +G + ++ ++ ++ DS+
Sbjct: 510 VQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAISEDSF 569
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 85/165 (51%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
K ++ C+ K +++ + ++ + PD + + +I KI +A ++ + E+
Sbjct: 82 KTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKH 141
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + YN +I+G C++ + A ++ D M ++G EP+V TYN+LI FC G +
Sbjct: 142 GKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLAL 201
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
R+++++L C P ++++LIE G E K++ + G
Sbjct: 202 RVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 210/451 (46%), Gaps = 36/451 (7%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF-----SHNYDTYHSIIHKLARA 91
P+P PK + L+LA YAG PN + + D ++ +
Sbjct: 23 PYPSLPTPKTAAP----KPRLNLA-----YAGAVAPNAVPHRSAASNDRLRVLVRRGDLE 73
Query: 92 RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
A VES+ L+ + C +I+ +GR A + E V S
Sbjct: 74 EAIRLVESM-AGLEPSAAGPCA-----ALIKKLCASGRTAEARRVLASCEP-----DVMS 122
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP---NVFTCNILIKALCKKDDVEGAIRVL 208
N ++ + D N+R +P + +T N LI+ LC + + A+ VL
Sbjct: 123 YNAMVAGYCVTGQLD-------NARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVL 175
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
D+M G VP++VT+T +L R + A ++ ++ D+G PD TY V+++G +
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR+ DA++ + + G EPN V+Y ++++ C ++ +A L+ +M ++ P+
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFE 387
+I LC G VE A E+ ++ + C P++ + I+H CK+ K+ A +
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P +++YNTL+ +C E+ A L + +KG P + +YN +I G K G +E
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +L EM+ KG P+ ++S + GL G
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREG 446
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 202/424 (47%), Gaps = 6/424 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++++ D L+ + P+ + T+IR GR + A+
Sbjct: 122 SYNAMVAGYCVTGQLDNARRLVAAMPMEPDTY----TYNTLIRGLCGRGRTDNALAVLDD 177
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V + LL A + Y + R K P++ T N+++ +C++
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDK-GCAPDIVTYNVVVNGICQEG 236
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A+ L +PS G PN V++ +L G E+A+++ ++ +G P+ T+
Sbjct: 237 RVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFN 296
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ + G + A++++D++ G PN ++Y ++ AFCK KK A ++ M+
Sbjct: 297 MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC G+V+ A EL +L K C P +T+I L K GK EA
Sbjct: 357 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEA 416
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E +G P ++TY+T+ +G+C + EA + + + + G+ PN YN ++ G
Sbjct: 417 LELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK I + M+ GC PN++++++LIEGL G E ++++ + G V
Sbjct: 477 LCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSK 536
Query: 499 DSWN 502
N
Sbjct: 537 TLVN 540
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 156/302 (51%), Gaps = 4/302 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V + N ++ C ++ A R++ MP M P+ T+ T++ G RG +NA V
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAV 174
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
D+L RG VPD TYT+L++ K AVK++DEM D G P+ VTY V++ C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A L + P++ V+ LC + EDA +L + RK P+
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I +LC+ G + A ++ D+ + G P+ L+YN ++ C+ ++ A + MV
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G P++ +YN L+ C+ G + +L ++ DKGC P S++ +I+GL ++G
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414
Query: 482 EV 483
E
Sbjct: 415 EA 416
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 161/332 (48%), Gaps = 20/332 (6%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFS--HNYDTYHSIIHKLARARAFDAVESLLTEL 104
+V+ I ++ +D A++ K P++ N +Y+ ++ L A ++ E L+ E+
Sbjct: 228 VVNGICQEGRVDDAMEFL----KSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 283
Query: 105 --KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
K P N+ I+ + GL E A++ +I K+ + S N +L+A +
Sbjct: 284 SRKGRPPNVVTFNMLISFLCRRGLV---EPAMEILDQIPKYGCTPNSLSYNPILHAFCKQ 340
Query: 163 KRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
K+ D V LM + + P++ + N L+ ALC+ +V+ A+ +L ++ G P
Sbjct: 341 KKMDRAMAFVELMVSSGCY-----PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 395
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
L+++ T++ G G E A + +++ +G PD TY+ + G + GR+ +A+K
Sbjct: 396 VLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAF 455
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+++D G+ PN V Y ++ CK + + A +L M+ +P+ + +I+ L E
Sbjct: 456 CKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYE 515
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
G V++A E+ L + + ++ I L
Sbjct: 516 GLVKEAREMMAELCSRGVVSKTLVNKGAIRLL 547
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 203/409 (49%), Gaps = 5/409 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R +NL + F K P F H+ ++YH +++ L +R F + L E++++ + +
Sbjct: 87 RCKNLGFSAHRFFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEI 146
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+ + V R+Y A P A++ F R+ +F ++ SV L+ LL L + K F
Sbjct: 147 NQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFF 206
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+HKF+ ++ IL++ + A +V DEM G +++ + ++L
Sbjct: 207 DRVKHKFEAKAKTYS--ILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCK 264
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G+++ A ++F +I G PDA +Y + + Y + + V+D M+ + PN T
Sbjct: 265 GGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFT 324
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I+ CK K +A LL +M++R P + ++ CE +V A +L ++
Sbjct: 325 YNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMV 384
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC-ESAEL 410
+ NC+PD + ++ L + G+ A ++++ ERG PS+ TY+ +I G+C + +L
Sbjct: 385 KDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKL 444
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
EA R ++ M+++G+ P T ML G + I IL +++G
Sbjct: 445 EEACRYFETMIDEGIPPYASTIEMLRNRLIGFG-LLDHIEILACKMERG 492
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 8/339 (2%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLV--HLMFKNSRHKFKVVPNVFTCNILIKALC 196
RI F + S S + L+N L ++++ ++ L+ H F++ + ++ ++
Sbjct: 104 RIPGF--EHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIW--LVFRSYS 159
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + AIR D M G+ P++ +L ++ A++ F D + + A
Sbjct: 160 RANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFF-DRVKHKFEAKAK 218
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY++L+ G+ +G +A KV DEM G + + Y ++EA CKG EA + ++
Sbjct: 219 TYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREI 278
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P + I CE + + R+ R + +P+ + II LCK GK+
Sbjct: 279 GSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKV 338
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A +L E ERG P +YNT++A CE +E+ A +L MV+ P+ +YNML
Sbjct: 339 EDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNML 398
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ ++G I E M ++G +P+ +++S++I GL
Sbjct: 399 LKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGL 437
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 146/317 (46%), Gaps = 16/317 (5%)
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITV--------------IRNYGLAGRPELAVKTFL 138
+ D ++ LL L + +KC + F V +R +G G A K F
Sbjct: 182 SVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFD 241
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ V + N+LL AL + D + MF+ V P+ + I I+A C+
Sbjct: 242 EMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREI-GSHGVEPDACSYAIFIRAYCEA 300
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+++ VLD M +VPN+ T+ I+ G +E+A ++ ++++RG PDA +Y
Sbjct: 301 NNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSY 360
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++ + + + A K++ M + P+ +Y ++++ + + A + + M +
Sbjct: 361 NTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGE 420
Query: 319 RKYVPSSALCCKVIDLLCEE-GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R + PS + +I LC++ GK+E+AC ++ ++ + P + + + L G +
Sbjct: 421 RGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLD 480
Query: 378 EAKKLFDEFERGSIPSL 394
+ L + ERG+ S+
Sbjct: 481 HIEILACKMERGTSCSI 497
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 3/252 (1%)
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ Y + +DA++ D M + G+ P+ ++ CK K A+ D ++
Sbjct: 153 LVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFD-RVKH 211
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
K+ + ++ + G+ +A +++ + + C D ++++ LCK G + EA
Sbjct: 212 KFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEA 271
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K+F E G P +Y I CE+ + + D M + PNVFTYN +I+
Sbjct: 272 YKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKK 331
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-E 497
CK G ++ ++L EM+++G P+ S++ ++ E K++S+ + +
Sbjct: 332 LCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPD 391
Query: 498 SDSWNFLLTRIV 509
S+N LL +V
Sbjct: 392 RHSYNMLLKLLV 403
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 201/382 (52%), Gaps = 2/382 (0%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E V+ +V + NT+++ R + ++ +++ V P+ +T LI +CK
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR-GVEPDSYTYGSLISGMCKGG 320
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A +L++M +G++P VT+ T++ GY +GD+ A +++ R +P +TY
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYN 380
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ G++ +A ++ +M D+G+ P+ +TY ++I +C+ + +A NL D+M+ +
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISK 440
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +I +L + +++ A +L+++++R+ PD + + +I C G + A
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRA 500
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L E + R +P +TYNTL+ G C ++ EA L +M +G+ P+ +YN LI G
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ K G+ + I +EML G P +++ LI+GL ++ +++ + G
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620
Query: 499 DSWNFLLTRIVSDLDSGAGALD 520
DS F L + +D + A D
Sbjct: 621 DSTYFSLIEGIGKVDDSSEASD 642
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 209/394 (53%), Gaps = 5/394 (1%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F +IR R + A + F +++ V + + N +L+ ++ + + V +++
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA-E 226
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ K+ V+T NI+I LCK+ ++ A + M ++G+ PN+VT+ T++ GY RG
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A+ V + +RG PD+ TY L+ G K G+L +A ++++M++ G+ P VTY
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ +C +A D+M++R +P+ + +I L EGK+++A + K +
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD+ + +I+ C+ G +A L DE +G P+L+TY +LI + + + A
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L++ ++ +G P++ +N LI G C GN +L+EM + P++ +++ L++G
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 475 YESGNEGEVGKVVSMATASGSVESD--SWNFLLT 506
G E +++ G + D S+N L++
Sbjct: 527 CREGKVEEARELLKEMKRRG-IRPDHISYNTLIS 559
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 38/370 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+I + + + +L ++K+ + + T+I Y G A
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT-YNTLIDGYCNKGDLVKAFGYRDE 366
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +V + N L++AL + D M K+ +VP+ T NILI C+
Sbjct: 367 MVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS-GIVPDSITYNILINGYCRCG 425
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ + A + DEM S G+ P LVT+T+++ R ++ A +F I+ G PD +
Sbjct: 426 NAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFN 485
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG+ G L A ++ EM+ + P+EVTY +++ C+ K EAR LL +M
Sbjct: 486 ALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM--- 542
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
R+ PD+ +T+I K G I +A
Sbjct: 543 --------------------------------KRRGIRPDHISYNTLISGYSKRGDINDA 570
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ DE G P+LLTYN LI G+C++ + A L +MV KG+ P+ TY LI+G
Sbjct: 571 FTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630
Query: 439 FCKIGNAKEG 448
K+ ++ E
Sbjct: 631 IGKVDDSSEA 640
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 1/192 (0%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ + + ++I A C+ K+ +A D M ++ VP ++ L + + E L+
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
+ R + +I+ LCKEGK+ +AK E G P+++TYNT+I G C
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ A + D M +GVEP+ +TY LI G CK G +E ILE+M + G P ++
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344
Query: 468 SLLIEGLYESGN 479
+ LI+G G+
Sbjct: 345 NTLIDGYCNKGD 356
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 225/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ ++A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQASKAETLVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++LL++ Y NE
Sbjct: 441 YNLLVQS-YLKKNE 453
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 244/489 (49%), Gaps = 14/489 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAF 94
+P P + R S + + +L L + K N +HN T + +I+ R
Sbjct: 60 RPLPSLVDFSRFFSGVASTKQFNLVLD---FCKKMELNGIAHNIYTLNIMINCFCRCCKT 116
Query: 95 DAVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
S+L +L P+ F T+I L + AV R+ + Q +V +
Sbjct: 117 CFAYSVLGKVMKLGYEPDT----TTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVT 172
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N+++N + ++ L + + + V +VFT + +I +LC+ ++ AI + EM
Sbjct: 173 YNSIVNGICKSGDTSLALDLLRKMDER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ G+ +LVT+ +++GG G + ++ D+ R +P+ T+ VL+D ++K G+L
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKL 291
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A ++ EM G+ PN +TY +++ +C + EA N+LD M++ P +
Sbjct: 292 QEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSL 351
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I C+ +V++ +L++++ ++ + + S ++ C+ GK+ A++LF E G
Sbjct: 352 IKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+P ++TY L+ G+C++ +L +A +++D+ + + ++ Y ++I+G CK G ++
Sbjct: 412 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWN 471
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIV 509
+ + KG PN +++++I GL + G+ E ++ G+ +D ++N L+ +
Sbjct: 472 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531
Query: 510 SDLDSGAGA 518
D D A A
Sbjct: 532 RDGDLTASA 540
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 224/435 (51%), Gaps = 8/435 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
T++++I+ L L+ + +N C N+ + +++ +G LA+
Sbjct: 137 TFNTLINGLCLESKVSEAVVLVARMVENG---CQPNVVTYNSIVNGICKSGDTSLALDLL 193
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++++ NV+ V + +T++++L ++ D +FK K + ++ T N L+ LCK
Sbjct: 194 RKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSLVTYNSLVGGLCK 252
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+++L +M S ++PN++T ++ +V G ++ A ++ +++ +G P+ T
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y LMDGY RL++A ++D M N P+ VT+ +I+ +CK K+ E L +
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+R V ++ ++ C+ GK+E A EL++ ++ +PD ++ LC GK+
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLE 432
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++F++ ++ + ++ Y +I GMC+ ++ +A L+ + KGV+PNV TY ++I
Sbjct: 433 KALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 492
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGS 495
G CK G+ E +L +M + G PN +++ LI G+ K++ M + S
Sbjct: 493 SGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 552
Query: 496 VESDSWNFLLTRIVS 510
++ S ++ + S
Sbjct: 553 ADASSIKMVIDMLSS 567
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 208/399 (52%), Gaps = 3/399 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+SI++ + ++ LL ++ + +K + T+I + G + A+
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDER-NVKADVFTYSTIIDSLCRDGCIDAAISL 227
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ S+ + N+L+ L + +++ + K+ + K++PNV T N+LI
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR-KIIPNVITFNVLIDVFV 286
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A + EM + G+ PN +T+ +++ GY + + A + ++ PD
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ GY K+ R+ + +K+ ++ G+ N VTY ++++ FC+ K A L +M
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ +P ++D LC+ GK+E A E+++ L + D + + II +CK GK+
Sbjct: 407 VSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKV 466
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A LF +G P+++TY +I+G+C+ L+EA L M E G EPN TYN L
Sbjct: 467 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTL 526
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I+ + G+ +++EEM G + +S ++I+ L
Sbjct: 527 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 18/285 (6%)
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD-------R 249
K+DD AI + EM +P+LV + G + + F +LD
Sbjct: 45 KEDD---AIDLFQEMIRSRPLPSLVDFSRFFSGVA-------STKQFNLVLDFCKKMELN 94
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G + T ++++ + + + A V+ ++ G EP+ T+ +I C K EA
Sbjct: 95 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEA 154
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L+ M++ P+ +++ +C+ G A +L +++ +N D STII
Sbjct: 155 VVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDS 214
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC++G I A LF E E +G SL+TYN+L+ G+C++ + + +L DM + + PN
Sbjct: 215 LCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPN 274
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
V T+N+LI F K G +E + +EM+ KG PN +++ L++G
Sbjct: 275 VITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDG 319
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 144/295 (48%), Gaps = 4/295 (1%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A +F +++ +P ++ G + + +ME NG+ N T +M
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FC+ K+ A ++L +++ Y P + +I+ LC E KV +A L R++ C
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ ++I++ +CK G A L + ER + TY+T+I +C + A
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ +M KG++ ++ TYN L+ G CK G +G+++L++M + PN +F++LI+
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286
Query: 476 ESGNEGEVGKVV-SMATASGSVESDSWNFLLTR--IVSDLDSGAGALDELLVKNC 527
+ G E ++ M T S + ++N L+ + + L LD ++ NC
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 38/236 (16%)
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA----------------- 326
+G+ V YG + + K +A +L +M++ + +PS
Sbjct: 24 SGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNL 83
Query: 327 ---LCCK---------------VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
C K +I+ C K A + ++++ PD +T+I+
Sbjct: 84 VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC E K+ EA L E G P+++TYN+++ G+C+S + + A L M E+ V+
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG--NEG 481
+VFTY+ +I C+ G I + +EM KG + +++ L+ GL ++G N+G
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDG 259
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 188/371 (50%), Gaps = 8/371 (2%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--NSRHKFKVVPNV 185
G A+K IE + + V +T+++ L ++K D + ++ N+R F P+V
Sbjct: 129 GETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIF---PDV 185
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T LI C + A +L+EM + PN+ T+ T++ G ++ +K +
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ +G PD Y++LMDGY +G + A ++ M GV P+ +Y ++I CKGK+
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-S 364
EA NLL +ML + +P + +ID LC+ G++ +L K + + P N ++ +
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG-QPANLVTYN 364
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+++ LCK + +A LF + ERG P+ TY LI G+C+ L + L+ ++ K
Sbjct: 365 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVK 424
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G +V+TY ++I G CK G E + + +M D GC PN +F ++I L E +
Sbjct: 425 GYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKA 484
Query: 484 GKVVSMATASG 494
K++ A G
Sbjct: 485 EKLLHEMIAKG 495
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 173/325 (53%), Gaps = 2/325 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L +LV+ K Y V + K K +VP++ T +ILI C + + VL ++ +
Sbjct: 16 ILGSLVKMKHYPTVISLSKQMEAK-GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKL 74
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G PN + T++ G +G+++ + ++ +G+ D +Y +L++G K+G A
Sbjct: 75 GYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCA 134
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+K++ +ED P+ V Y +I+ CK K EA +L +M R P +I
Sbjct: 135 IKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICG 194
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
C G++ +A L ++ KN P+ +T+I LCKEGK+ E+K L ++G P
Sbjct: 195 FCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPD 254
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ Y+ L+ G C E+ +A +++ MV+ GV P+V++YN++I G CK E + +L
Sbjct: 255 VVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLR 314
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESG 478
EML K P+ ++S LI+GL + G
Sbjct: 315 EMLHKNMIPDTVTYSSLIDGLCKLG 339
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 154/294 (52%), Gaps = 1/294 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P + ++ +L K I + +M + G+VP+LVT + ++ + G + +
Sbjct: 7 IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
V G IL G+ P+ LM G G + ++ D++ G + ++V+YG+++ C
Sbjct: 67 VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K ++ A LL + R P + +ID LC++ V++A +L+ + + PD
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T+I C G++ EA L +E +I P++ TYNTLI +C+ ++ E+ L M
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+KGV+P+V Y++L+ G+C +G ++ +I M+ G P+ S++++I GL
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 2/286 (0%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N + N TY+++I L + ++LL + + +K ++ ++ Y L G +
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKG-VKPDVVIYSILMDGYCLVGEVQK 273
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + FL + + V V S N ++N L + KR D + + HK ++P+ T + LI
Sbjct: 274 AKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK-NMIPDTVTYSSLI 332
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + + + EM G NLVT+ ++L G +++ A +F + +RG
Sbjct: 333 DGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQ 392
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TYT L+DG K GRL + + G + TY VMI CK EA +
Sbjct: 393 PNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAM 452
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
M +P++ +I L E+ + + A +L ++ K +P
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML +++P K++ L + L K++ K +PD S +I+ C G+
Sbjct: 1 MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60
Query: 376 I-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ + L + G P+ + NTL+ G+C E+ ++ D +V +G + + +Y +
Sbjct: 61 MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ G CKIG + I++L + D+ P+ +S +I+GL + E + S A G
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180
Query: 495 SV-ESDSWNFLLTR--IVSDLDSGAGALDELLVKN 526
+ ++ L+ + L G L+E+++KN
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 219/471 (46%), Gaps = 40/471 (8%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+ + L P ++ N +LAL+ F + + + N H++ TY ++ L+ ++
Sbjct: 98 FSKTLTPSIAFEVVRGLNNPELALKFFQLS-RVNLNLCHSFRTYSFLLRSLSEMGFHESA 156
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL-----RIEKFNVQR----- 147
+++ + + P+ +V FL KFN+ R
Sbjct: 157 KAVYDCMNID-------------------GHSPDASVLGFLVSSATDAGKFNIARTWVDG 197
Query: 148 ---SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC--NILIKALCKKDDVE 202
S+ N LLN LV+ + D F R + + +C NILI+ LC+ V+
Sbjct: 198 VEFSLVVYNKLLNQLVRGNQVDEAVCFF---REQMGLHGPFDSCSFNILIRGLCRIGKVD 254
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATTYTVL 261
A + +EM G P+++T+ T++ G+ +++ + ++L + PD TYT +
Sbjct: 255 KAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSI 314
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ GY KLG++ A + + M +G++PN T+ ++I F K A N+ ++ML
Sbjct: 315 ISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGC 374
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
P +ID C GKVE + +LW L +N P+ + + + LCKE ++ EA+
Sbjct: 375 PPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARG 434
Query: 382 LFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ + R + YN +I G C++ + EA + +M EK +P+ TY +LI G C
Sbjct: 435 FLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHC 494
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
G E I I ML GC P+ + + LI L ++G E +++ +A+
Sbjct: 495 MKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIAS 545
>gi|255548031|ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545552|gb|EEF47056.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 239/503 (47%), Gaps = 17/503 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
WP+ L P L +I Q+N +AL+IF A +PN+ HN Y ++I L + +
Sbjct: 5 WPRLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGRITEM 64
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+ +L +++++ +C +++F I+ Y G A+ F I +FN S NTLL
Sbjct: 65 KEVLDQMRED-SCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNTLLQ 123
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+V+ + + H +F S + ++V V + N+L+ LC+ + + A++V EM G
Sbjct: 124 IMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQGCY 183
Query: 218 PNLVTHTTILGGYVWRGDIENAKRV----FGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
P+ ++ ++ G G + A + F I +G D Y + +D +G +
Sbjct: 184 PDRDSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGMVEQ 243
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE-ARNLLDDMLQRKYVPS-SALCCKV 331
A++V+ ++ G++ + + + + C + E ++L+++ L R +PS S+
Sbjct: 244 ALEVLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYTAMA 303
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF--DEFERG 389
+D EGK+ A ++ + P + LCKEGK+ EA + + E
Sbjct: 304 VDFY-AEGKLSQADKVLDETQDRGFRPSLLTYEAKVAALCKEGKVHEAINVLEVEMVEGN 362
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK-GVEPNVFTYNMLIQGFCKIGNAKEG 448
+P++ YN L+ G+C++ A + M ++ G N TY +L+ G C+ G E
Sbjct: 363 CVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQTGCVANKETYCILVHGLCQDGGFIEA 422
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK-VVSMATASGSVESDSWNFLLTR 507
RILEEML K +P +F++LI GL G + E + M + + E WN L+T
Sbjct: 423 SRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEATMWLEEMISLDEAPELSVWNSLVTC 482
Query: 508 IVS---DLDSGAGALDELLVKNC 527
+ S D+D+ L NC
Sbjct: 483 LCSNTADIDACCETFKRL--SNC 503
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 219/435 (50%), Gaps = 14/435 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I L + R DA + L+ E+ + I ++ I G E A F
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHG-INIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++ +L+ + K Y+L+ M K + +V + +T ++K +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN-----IVISPYTYGTVVKGM 427
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C D++GA ++ EM + G PN+V +TT++ ++ +A RV ++ ++G PD
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+ G K R+ +A + EM +NG++PN TYG I + + + A + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + +P+ LC +I+ C++ KV +AC ++ ++ + + D + +++ L K K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A+++F E +G P + +Y LI G + + +A ++D+MVE+G+ PNV YNM
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ GFC+ G ++ +L+EM KG PN ++ +I+G +SG+ E ++ G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 495 SVESDSWNFLLTRIV 509
V +F+ T +V
Sbjct: 728 LVPD---SFVYTTLV 739
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 206/430 (47%), Gaps = 13/430 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N Y ++I + F +L E+K+ P+I C +L I + + A R + A
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK----AKRMDEA 506
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + ++ + + ++ ++ + K R + V+PN C LI
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLIN 565
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CKK+ V A M G++ + T+T ++ G +++A+ +F ++ +G P
Sbjct: 566 EYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D +Y VL++G+ KLG + A + DEM + G+ PN + Y +++ FC+ + +A+ LL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M + P++ C +ID C+ G + +A L+ + K +PD+ + +T++ C+
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE--SAEL-TEA-GRLWDDMVEKGVEPNV 429
+ A +F ++G S +N LI + + EL TE RL D ++ +PN
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN++I CK GN + + +M + P +++ L+ G + G E+ V
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 490 ATASGSVESD 499
A A+G +E D
Sbjct: 866 AIAAG-IEPD 874
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 200/423 (47%), Gaps = 10/423 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S+I L++A+ D S L E+ +N +K + I Y A A K +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V + L+N + ++ +++ + ++ + T +L+ L K D
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDK 607
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A + EM G+ P++ ++ ++ G+ G+++ A +F ++++ G P+ Y +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ + G + A +++DEM G+ PN VTY +I+ +CK EA L D+M +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP S + ++D C VE A ++ +K C A + +I+W+ K GK E K
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKT-ELK 785
Query: 381 -----KLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+L D F+R P+ +TYN +I +C+ L A L+ M + P V TY
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ G+ K+G E + +E + G P+ +S++I + G + +V A
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 495 SVE 497
+V+
Sbjct: 906 AVD 908
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 200/444 (45%), Gaps = 56/444 (12%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENLFITVIRNYGLAGRPEL 132
N TY + I A F + + + E+++ CG + L +I Y +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRE-----CGVLPNKVLCTGLINEYCKKEKVIE 575
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + + + ++ L+N L +N + D +F+ R K + P+VF+ +LI
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLI 634
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K +++ A + DEM G+ PN++ + +LGG+ G+IE AK + ++ +G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+A TY ++DGY K G L +A ++ DEM+ G+ P+ Y +++ C+ A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC----MPDNAISSTIIH 368
++ S+A +I+ + + GK E E+ RL+ + P++ + +I
Sbjct: 755 FGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+LCKEG + AK+LF + + ++ P+++TY +L+ G + E ++D+ + G+EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 428 NVFTYNMLI----------------------------------------QGFCKIGNAKE 447
+ Y+++I GF K+G +
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+++E M+ P+ + LI
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELI 957
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF + Y G E AV F + + LL+AL++ R DL ++K
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 176 RHKFKVVPNVFTCNILIKALCK-------KD--------------DVEGAIRVLDEMPSM 214
+ VV +V T ++LI A C+ KD +V+GA+++ + M
Sbjct: 213 VER-NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+VP T+ ++ G +E+AK + ++ G D TY++L+DG +K GR DA
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA 330
Query: 275 VK------------------------------------VMDEMEDNGVEPNEVTYGVMIE 298
K + D M +G+ P Y +IE
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C+ K + LL +M +R V S V+ +C G ++ A + K ++ C P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ I +T+I + + +A ++ E E+G P + YN+LI G+ ++ + EA
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+MVE G++PN FTY I G+ + + ++EM + G PNK + LI
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T NI+I LCK+ ++E A + +M + ++P ++T+T++L GY G V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-----EDNGVEPNEVTYGVMI 297
F + + G PD Y+V+++ ++K G T A+ ++D+M D+G + + T ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
F K + A ++++M++ +Y+P SA ++I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN VT+ ++ G++E AK +F + + +P TYT L++GY K+GR + V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP-----SSALCCKVI 332
DE G+EP+ + Y V+I AF K + +A L+D M + V S + C ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ G++E A ++ + ++R +PD+A +I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
Length = 647
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 225/503 (44%), Gaps = 43/503 (8%)
Query: 31 VTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR 90
TP WP+ L L ++ +++ AL +F A + S D+ + +
Sbjct: 103 ATPSATRWPKTLTADHLHRLVRAERDPRRALALFDAATARPSSASPPDDSTAAAAAPVLP 162
Query: 91 ARAFDAVESLLT--------------------ELKQNP-EIKCGENLFITVIRNYGLAGR 129
+R D V SLLT EL +P E+ E F++++R Y A +
Sbjct: 163 SR--DTV-SLLTSRLASASLLPLASSLLSRSRELFPSPGEL---EPPFLSLLRAYSRAHQ 216
Query: 130 PELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
P A+ F + S RS +L ALV + L + + R P T
Sbjct: 217 PLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADMRAA-GFAPTTATY 275
Query: 189 NILIKALCKKDDV--EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N+L+KA C V + A+RV +P P+ ++ T++ G RG + A+ +F ++
Sbjct: 276 NVLVKAHCSDAAVPIDDAVRVFRNIPK----PDACSYNTVIDGLCRRGRLPEARDLFAEM 331
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ G P TYT L+ + DA+K+ DEM G+ PN VTY +I+ CKG ++
Sbjct: 332 IANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRA 391
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A LLD M++ + +P++ VID LC+EG + A E+ R+ + PD + +
Sbjct: 392 ASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKL 451
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY-------NTLIAGMCESAELTEAGRLWD 418
I LC G+ EA DE I P+ LT+ + ++ +C E+ A +++
Sbjct: 452 IVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQ 511
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M +G+ T+++L++ K N ++ ++ +ML + C P + ++ ++ +
Sbjct: 512 SMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVRAYWSKK 571
Query: 479 NEGEVGKVVSMATASGSVESDSW 501
VG V A V + +W
Sbjct: 572 KLRAVGSVQGPCAAVAKVGARNW 594
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 187/345 (54%), Gaps = 2/345 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR + A++ F +E + V + N+L++ L + + V F N P+ FT
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT-WFLNLMVDRGFSPDAFT 253
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
ILI LCK+ V A ++L+ M G P+++T+ T++ G G +E+A ++F +
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
DRG + +Y +L++GY K ++ +A ++ +EM G++P+ VTY +I A C+ +
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A+ L +M + C ++D LC+ G +E+A +L++ + + P+ + S ++
Sbjct: 374 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+C+ GK+ EA K FDE + + P + YN LI G+C L+EA +L M EKG
Sbjct: 434 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 493
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
P+ T+N++IQ K E I++LEEM ++ P++ S+L+
Sbjct: 494 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 217/454 (47%), Gaps = 13/454 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + LV ++ + + A+Q+F + + TY +I+ L +AR
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTE--KGLFGDAKTYGILINGLCKARKTGLAI 132
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L ++K N C ++F +I + G A+ F + + V ++L+
Sbjct: 133 KLHEKMKGN----CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L + R FK + + +V+T N LI L + + L+ M G
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGR-GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P+ T T ++ G G + A+++ + +G PD TY LM+G +G+L DA K
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ + + D G++ N +Y ++I +CK +K EA L ++M + PS+ +I LC
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLL 395
+ G+V A +L+ + + ++ LCK G + EA LF ++ P++
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
++ L+ GMC + +L EA + +D++ + G+EP+ YN+LI G C G E +++L +M
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 487
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+KGC P+ +F+++I+ L + E E+ + + +
Sbjct: 488 EEKGCLPDSITFNVIIQNLLK---ENEIHEAIQL 518
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 196/381 (51%), Gaps = 7/381 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G P+ AV+ F + + + ++ L+N L + ++ L + + + K +VFT
Sbjct: 92 GIPD-AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCK--GDVFT 148
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
++I +LCK A+ + EM G++P++V +++++ G G ++ A F ++
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 208
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
RG D TY L+ G + G + ++ M D G P+ T+ ++I+ CK K G
Sbjct: 209 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 268
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA+ +L+ M + P +++ LC G++EDA +L++ L + + + +I
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ CK+ KI EA +LF+E +G PS +TYNTLI +C+S + A +L+ +M G
Sbjct: 329 NGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 388
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ TY +L+ G CK G+ +E I + + + PN FS+L++G+ +G E K
Sbjct: 389 LKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 448
Query: 487 VSMATASGSVESDS--WNFLL 505
+ +G +E D+ +N L+
Sbjct: 449 FDEISKNG-LEPDTIAYNILI 468
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 160/300 (53%), Gaps = 37/300 (12%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P+ VT TT++ G I +A ++F ++ ++G DA TY +L++G K + A
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+K+ ++M+ N + + TYG++I++ CK + EA ++ +M+ +P + ++D
Sbjct: 132 IKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 335 LCEEGKVEDACE----------------------------LWKR-------LLRKNCMPD 359
LC G++++A E LWK ++ + PD
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I LCKEGK+ EA+++ + +G P +LTYNTL+ G+C +L +A +L++
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ ++G++ NVF+YN+LI G+CK E R+ EEM KG P+ +++ LI L +SG
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 156/314 (49%), Gaps = 8/314 (2%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVE---SLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
S + TY+S+IH L+RA + V +L+ + +P+ F +I G+
Sbjct: 213 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT----FTILIDGLCKEGKVG 268
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A + + + + + NTL+N L + + +F++ + + NVF+ NIL
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNIL 327
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK ++ A R+ +EM G+ P+ VT+ T++G G + A+++F ++ G
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+TY VL+DG K G L +A+ + ++ +PN + ++++ C+ K EA
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
D++ + P + +I+ LC +G + +A +L ++ K C+PD+ + II L
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 507
Query: 372 KEGKIWEAKKLFDE 385
KE +I EA +L +E
Sbjct: 508 KENEIHEAIQLLEE 521
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 61 LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITV 120
L++ H+ GK P+ TY+++++ L + L L IK + +
Sbjct: 274 LELMHHKGK-EPDIL----TYNTLMNGLCLVGQLEDATKLFESLADRG-IKLNVFSYNIL 327
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK 180
I Y + + A + F + ++ S + NTL+ AL Q+ R +F + +
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ C +L+ LCK +E AI + + PN+ + +L G G +E A
Sbjct: 388 FLKLSTYC-VLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ F +I G PD Y +L++G G L++AVK++ +ME+ G P+ +T+ V+I+
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSAL 327
K + EA LL++M R + P A+
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSPDEAV 533
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L+R + P + ++ + E + DA +L+ + K D +I+ LCK K
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A KL ++ + + TY +I +C+ TEA ++ +M+ G+ P+V Y+ L+
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G C+ G KE + +EM +G + +++ LI GL +G EV +++ G
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG-F 247
Query: 497 ESDSWNFLL 505
D++ F +
Sbjct: 248 SPDAFTFTI 256
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 181/332 (54%), Gaps = 2/332 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+V+ K+YD+V + + +++T NI+I C V A+ +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVV-ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P+ VT +++ G+ R + +A + +++ G+ PD Y ++D K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
R+ DA E+E G+ PN VTY ++ C + +A LL DM+++K P+
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EF 386
++D + GKV +A EL++ ++R + PD S++++ LC +I EA ++FD
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G + +++YNTLI G C++ + + +L+ +M ++G+ N TYN LIQGF + G+
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +M G P+ ++++L+ GL ++G
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
T L + N DL M K+ + P++ N L+ A+ K + I + +M
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKS-----RPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+G+ +L T ++ + + A + G +L G+ PD T L++G+ + R++D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
AV ++D+M + G +P+ V Y +I++ CK K+ +A + ++ ++ P+ +++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
LC + DA L +++K P+ S ++ K GK+ EAK+LF+E R SI P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++TY++L+ G+C + EA +++D MV KG +V +YN LI GFCK ++G+++
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
EM +G N +++ LI+G +++G+ + + S G + D W +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTY 403
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 226/457 (49%), Gaps = 7/457 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+RL R L+ A+ +F K P F D ++ ++ + + + +D V SL ++
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRP-FPSIVD-FNRLLSAIVKLKKYDVVISLGKKM 111
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ I+ F VI + + LA+ ++ K + ++ +L+N + R
Sbjct: 112 -EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 165 Y-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D V L+ K +K P++ N +I +LCK V A E+ G+ PN+VT+
Sbjct: 171 VSDAVSLVDKMVEIGYK--PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T ++ G +A R+ D++ + P+ TY+ L+D ++K G++ +A ++ +EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
++P+ VTY ++ C + EA + D M+ + + +I+ C+ +VED
Sbjct: 289 MSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
+L++ + ++ + + +T+I + G + +A++ F + + G P + TYN L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ EL +A +++DM ++ ++ ++ TY +I+G CK G +E + + KG P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
+ +++ ++ GL G EV + + G +++D
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 172/351 (49%), Gaps = 2/351 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+++ + R AV ++ + + + + N ++++L + KR + FK K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PNV T L+ LC A R+L +M + PN++T++ +L +V G +
Sbjct: 220 -GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK +F +++ PD TY+ L++G R+ +A ++ D M G + V+Y +I
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK K+ + L +M QR V ++ +I + G V+ A E + ++ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLW 417
D + ++ LC G++ +A +F++ ++ + ++TY T+I GMC++ ++ EA L+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ KG++P++ TY ++ G C G E + +M +G N + S
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 19/336 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY ++++ L + + LL+++ K P + L ++N G+ A
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN----GKVLEA 279
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + + ++ + + ++L+N L + R D + MF K + +V + N LI
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLIN 338
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE +++ EM G+V N VT+ T++ G+ GD++ A+ F + G P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY +L+ G G L A+ + ++M+ ++ + VTY +I CK K EA +L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + P ++ LC +G + + L+ ++ ++ M ++ S +
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------D 510
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESA 408
G I + +L + G PSLL + +G+C+ A
Sbjct: 511 GDITLSAELIKKMLSCGYAPSLL--KDIKSGVCKKA 544
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 184/325 (56%), Gaps = 2/325 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN++T + +I LCK V +VL EM G+ P+ V +TT++ G+ G+ + A ++
Sbjct: 178 PNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKL 237
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ R VPD+ ++ L+ G G++ +A K+ +EM G EP+EVTY +I+ +CK
Sbjct: 238 FSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCK 297
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A L + M+Q P+ + D LC+ G+++ A EL + RK + +
Sbjct: 298 LGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+TI++ LCK G I +A KL +E E G P +TY TL+ ++ E+ +A L +M+
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREML 417
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++G++P V T+N+L+ G C G ++G R+L+ ML+KG PN +++ +++ N
Sbjct: 418 DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMR 477
Query: 482 EVGKVVSMATASGSV-ESDSWNFLL 505
++ A G V +S+++N L+
Sbjct: 478 ISTEIYRGMCAQGVVPDSNTYNILI 502
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 159/303 (52%), Gaps = 2/303 (0%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAI-RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V + +CN+ + L K D+ G + +V E P +G+ N ++ ++ G I
Sbjct: 68 YGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIR 127
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + + +G +PD +YT ++DGY +G L V+++ EM+ G++PN TY +I
Sbjct: 128 EAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSII 187
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK K E +L +M++R P + +ID C+ G + A +L+ + + +
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD+ S +I L GK+ EA KLF+E ++G P +TY LI G C+ E+ +A L
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ MV+ G+ PNV TY L G CK G +L EM KG N ++++ ++ GL +
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367
Query: 477 SGN 479
+GN
Sbjct: 368 AGN 370
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 202/404 (50%), Gaps = 3/404 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY SII L ++ E +L E+ + + ++ T+I + G + A K
Sbjct: 179 NLYTYSSIILLLCKSGKVVEGEKVLREMMKRG-VFPDHVIYTTLIDGFCKLGNTQAAYKL 237
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E + + + L+ L + + +F N K P+ T LI C
Sbjct: 238 FSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF-NEMIKKGFEPDEVTYTALIDGYC 296
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +++ A + ++M +G+ PN+VT+T + G G+++ A + ++ +G + +
Sbjct: 297 KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIS 356
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +++G K G + AVK+M+EM++ G+ P+ +TY +++A+ K + +AR LL +M
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L R P+ +++ LC GK+ED L K +L K MP+ A ++I+ C +
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM 476
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ +++ +G +P TYN LI G C++ + EA L +MVEK +YN L
Sbjct: 477 RISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNAL 536
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I+GF K E ++ EEM +G + ++L ++ YE GN
Sbjct: 537 IKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGN 580
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 162/303 (53%), Gaps = 1/303 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P+ LI CK + + A ++ EM + +VP+ + + ++ G G + A
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F +++ +G+ PD TYT L+DGY KLG + A + ++M G+ PN VTY + +
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + A LL +M ++ + + +++ LC+ G + A +L + + PD
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T++ K G++ +A++L E +RG P+++T+N L+ G+C S +L + RL
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+EKG+ PN TYN +++ +C N + I M +G P+ ++++LI+G ++ N
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510
Query: 480 EGE 482
E
Sbjct: 511 MKE 513
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 178/360 (49%), Gaps = 3/360 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ +F + + N L+++L+ R V +F+ P+V++ N++IK +C+
Sbjct: 205 KASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRV 264
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATT 257
V+ A+ +++ M G P+ VTH ++ G ++ V + G +P+ T
Sbjct: 265 GQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVT 324
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T ++ GY K G+L DA+ V ++M +G+ PN VTY V+I + K G A + M
Sbjct: 325 FTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT 384
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + P +ID C G+++DA +W + + P+ S IIH LCK+ +
Sbjct: 385 RLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSD 444
Query: 378 EAKKLFDEFE-RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA L +E R I P YN +I +C+ ++ EA + M EKG P+ +TY +L
Sbjct: 445 EAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 504
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G+C E I EM++ GC P+ + + I L ++G EV V+ +A+ S
Sbjct: 505 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLASGGAS 564
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 9/320 (2%)
Query: 88 LARARAFDAV---ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
+ R R D V E + + +P++ F VI+ G+ + A++ R+ +F
Sbjct: 226 IGRGRVHDVVALFERWIQDRVYSPDVWS----FNVVIKGVCRVGQVQKALELVERMNEFG 281
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ N L++ L + H + + + +PNV T +I CK +E A
Sbjct: 282 CSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDA 341
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ V ++M + G++PN VT+ ++ GY GD+ +A V+ + PD T++ L+DG
Sbjct: 342 MAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDG 401
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-LQRKYVP 323
Y + G+L DA+++ +M + ++PN T+ ++I + CK +S EA LL+++ L+ P
Sbjct: 402 YCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAP 461
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ + VID+LC+ GKV++A + K + K C PD + +I C + +I EA F
Sbjct: 462 QAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFF 521
Query: 384 DEF-ERGSIPSLLTYNTLIA 402
E E G P +T N I+
Sbjct: 522 HEMVEAGCSPDSITVNCFIS 541
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 164/371 (44%), Gaps = 77/371 (20%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-------PSMGMVPNLVTHTT------ 225
+ P+ +C +I LC+ A+++ D+M P + LV+ T
Sbjct: 138 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 197
Query: 226 -----------------------ILGGYVWRGDIENAKRVFGD-ILDRGWVPDATTYTVL 261
++ + RG + + +F I DR + PD ++ V+
Sbjct: 198 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVV 257
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ G ++G++ A+++++ M + G P+ VT+ ++++ C+ + +L LQR
Sbjct: 258 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVL-RRLQRDG 316
Query: 322 V--PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
V P+ VI C+ GK+EDA ++ ++ MP+ + +I+ K G + A
Sbjct: 317 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 376
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+++ + R P ++T+++LI G C +L +A R+W DM + ++PNV+T++++I
Sbjct: 377 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 436
Query: 439 FCKIGNAKEGIRILEE------------------------------------MLDKGCFP 462
CK + E I +L E M +KGC P
Sbjct: 437 LCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 496
Query: 463 NKTSFSLLIEG 473
+K ++++LI G
Sbjct: 497 DKYTYTILIIG 507
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 122/296 (41%), Gaps = 37/296 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ ++ L R +L L+++ F +VI Y AG+ E A+ +
Sbjct: 288 THNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVY-- 345
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
N +V + ++PN T N+LI K
Sbjct: 346 -----------------NDMVAS-----------------GIMPNTVTYNVLINGYGKVG 371
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A+ V +M + P++VT ++++ GY G +++A R++ D+ P+ T++
Sbjct: 372 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 431
Query: 260 VLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++ K R +A+ +++E+ + P Y +I+ CK K EA + M +
Sbjct: 432 IIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEE 491
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P +I C + ++ +A + ++ C PD+ + I L K G
Sbjct: 492 KGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 547
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRL---------------LRKNCMPDNAISST-- 365
PS+ C ++I +LC G+ DA +L+ ++ L +C N + ++
Sbjct: 142 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 201
Query: 366 -------------------IIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGM 404
++ L G++ + LF+ + +R P + ++N +I G+
Sbjct: 202 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 261
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CFPN 463
C ++ +A L + M E G P+ T+N+L+ G C+ G +L + G C PN
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 321
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGALD 520
+F+ +I G ++G + V + ASG + + ++N L+ V DL S
Sbjct: 322 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 381
Query: 521 ELLVKNC 527
++ C
Sbjct: 382 QMTRLRC 388
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 217/450 (48%), Gaps = 22/450 (4%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPE------------IKCGEN------LFITVIR 122
Y I+H LA +R F L EL + + I C E+ +F +++
Sbjct: 182 YCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVK 241
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
Y GR +++F R+ + +V + N LLN L++ D +++ +F +
Sbjct: 242 AYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYE-EMERFGIA 300
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN++T NIL LCK D + L++M G P++VT+ T++ Y +G +++A +
Sbjct: 301 PNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYL 360
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ + RG VPD +YT LM+G K GR+ +A ++ M G+ P+ VTY +I +CK
Sbjct: 361 YKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCK 420
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K E+R+LL DM+ P S C +++ +EGK A L L R I
Sbjct: 421 EGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDI 480
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC+E + + AK L + + G L YN LI C+ + EA L +MV
Sbjct: 481 YSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMV 540
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+K ++PN+ TY +J ++ + EG ++ EM+ G P+ L G +
Sbjct: 541 DKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDID 600
Query: 482 EVGKVVSMATASGSV-ESDSWNFLLTRIVS 510
+ ++S + +++S+N L+ RI S
Sbjct: 601 KAESLLSFXAKEFQIHDTESFNALI-RITS 629
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 3/346 (0%)
Query: 134 VKTFL-RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
V FL ++E+ + + NTL+N+ + R D ++K ++ VVP++ + L+
Sbjct: 322 VNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYK-IMYRRGVVPDLVSYTALM 380
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK+ V A ++ M G+ P++VT+ T++ GY G ++ ++ + D++ G
Sbjct: 381 NGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGIS 440
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD+ T VL++GY K G+ A+ ++ E++ GV ++ Y +I A C+ + A+NL
Sbjct: 441 PDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNL 500
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L+ M Q + + ++I C+ + +A L ++ K P+ A +J L +
Sbjct: 501 LERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSR 560
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ E + L E G +P L L G C ++ +A L ++ + +
Sbjct: 561 LSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTES 620
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+N LI+ G+ + I + ML G PN + +I+GL+++
Sbjct: 621 FNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKA 666
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 153/377 (40%), Gaps = 44/377 (11%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N T++ + H L + V L ++++ +P+I + T+I +Y GR + A
Sbjct: 302 NLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVT----YNTLINSYCRKGRLDDA 357
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + V + S L+N L + R H +F H+ + P++ T N LI
Sbjct: 358 FYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHR-GLSPDIVTYNTLIH 416
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI----------------- 236
CK+ ++ + +L +M G+ P+ T ++ GY G
Sbjct: 417 GYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSI 476
Query: 237 --------------ENAKRVFGDILDR----GWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
EN ++L+R G + Y L+ + + + +A+ +
Sbjct: 477 SQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLK 536
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM D ++PN TY +J + +S E +L+ +M+ +P +C + C E
Sbjct: 537 MEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRE 596
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTY 397
++ A L ++ + D + +I +G I + ++ D + G +P+ LT
Sbjct: 597 NDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTC 656
Query: 398 NTLIAGMCESAELTEAG 414
+I G+ ++ + A
Sbjct: 657 KYVIDGLWKARRVDSAS 673
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 222/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDIPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ TI+ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR++L +M+ + P+ +++ ++I C G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAAKAEALVRQLLKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
+ L++ Y NE
Sbjct: 441 YDSLVQS-YLKKNE 453
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 225/442 (50%), Gaps = 6/442 (1%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + + + VS++ R+++ L IF+ A + F+HN TY ++ L R + F A
Sbjct: 49 PKTKFISHESAVSLMKRERDPQGVLDIFNKASQ-QKGFNHNNATYSVLLDNLVRHKKFLA 107
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTL 155
V+++L ++K + E+LF+ ++R++ + + ++ F I+ V+ S+ +++T
Sbjct: 108 VDAILHQMKYET-CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTC 166
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
LN L+ + +L + ++H + PN NIL+K CK D+ A V++EM G
Sbjct: 167 LNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 216 M-VPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTVLMDGYIKLGRLTD 273
+ PN +T++T++ + A +F D++ + G PD T+ V+++G+ + G +
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A K++D M+ NG PN Y ++ FCK K EA+ D++ + + +++
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
C G+ ++A +L + C D + I+ L EG+ EA ++ D++ G
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ +Y ++ +C + EL +A + M E+G+ P+ T+N L+ C+ G + G+R+L
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
L G P S+ ++E +
Sbjct: 467 IGFLRIGLIPGPKSWGAVVESI 488
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 181/364 (49%), Gaps = 7/364 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ + LL+ LV++K++ V + +++ N L++ + D + + + +
Sbjct: 91 TYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLN-LMRHFSRSDLHDKVMEMFNL 149
Query: 211 MPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVF-GDILDRGWVPDATTYTVLMDGYIKL 268
+ + V P+L +T L + G++ ++++ + G P+ + +L+ + K
Sbjct: 150 IQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKN 209
Query: 269 GRLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G + A V++EM+ +G+ PN +TY +++ +S EA L +DM+ ++ + +
Sbjct: 210 GDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPV 269
Query: 328 CCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
V I+ C G+VE A ++ + + C P+ S +++ CK GKI EAK+ FDE
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 387 ERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
++ + + Y TL+ C + E EA +L +M + TYN++++G G +
Sbjct: 330 KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRS 389
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFL 504
+E +++L++ +G NK S+ +++ L +G + K +S+ + G +WN L
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Query: 505 LTRI 508
+ R+
Sbjct: 450 VVRL 453
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 148/359 (41%), Gaps = 57/359 (15%)
Query: 83 SIIHKLARAR-AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP---ELAVK--- 135
++I +AR + + +A+ + L L + E+ L + N GL + VK
Sbjct: 148 NLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHC 207
Query: 136 -------TFLRIEKFNVQRSVRSL------NTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
FL +E+ ++RS S +TL++ L + R +F++ K +
Sbjct: 208 KNGDINFAFLVVEE--MKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGIS 265
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N++I C+ +VE A ++LD M G PN+ ++ ++ G+ G I+ AK+
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 243 FGDILDRGWV-----------------------------------PDATTYTVLMDGYIK 267
F ++ G D TY V++ G
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GR +A++++D+ GV N+ +Y +++ A C + +A L M +R P A
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+++ LCE G E + LR +P ++ +CKE K+ +L D
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK--- 304
+G+ + TY+VL+D ++ + ++ +M+ E + ++ F +
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE-----------------DACEL 347
K E NL+ + + K PS ++LL + G+V + C +
Sbjct: 142 KVMEMFNLIQVIARVK--PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTC-I 198
Query: 348 WKRLLRKNC---------------------MPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ L++ +C P++ ST++ L + EA +LF++
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 387 --ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+ G P +T+N +I G C + E+ A ++ D M + G PNV+ Y+ L+ GFCK+G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNF 503
+E + +E+ G + ++ L+ +G E K++ M + ++ ++N
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 504 LLTRIVSD 511
+L + S+
Sbjct: 379 ILRGLSSE 386
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF--ITVIRNYGLAGRPELAVKTF 137
T++ +I+ RA + + +L +K+N C N++ ++ + G+ + A +TF
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNG---CNPNVYNYSALMNGFCKVGKIQEAKQTF 326
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++K ++ TL+N +N D + + + + T N++++ L
Sbjct: 327 DEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS-RCRADTLTYNVILRGLSS 385
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E A+++LD+ S G+ N ++ IL G++E A + + +RG P T
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ + G V+V+ G+ P ++G ++E+ CK +K LLD ++
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 213/426 (50%), Gaps = 6/426 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y ++I +L A D V++ L + + + L++ I+ Y AGR AV F R
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ F + + N +++ALV +D H ++ V P+ T + +K+ C
Sbjct: 97 MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA-GVAPDARTHTVRLKSFCLTG 155
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+R+L + G + T++ G G NA+ +F ++L R PD T+
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ + G + ++ ++ ++ G+ N+ T + I C+ + EA L++ M
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM--G 273
Query: 320 KYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
YV P ++ LC++ KV++A + R++ + C+PD+ +TII CK G + E
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333
Query: 379 AKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +L D +G +P +TY +LI G+C ++ A L+++ K ++P++ YN L++
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVK 393
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G C+ G ++++ EM+++GC P+ +++++I GL + GN + V++ A G +
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL- 452
Query: 498 SDSWNF 503
D + F
Sbjct: 453 PDVFTF 458
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 177/344 (51%), Gaps = 2/344 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N L + +F ++ K + P++ N L+K LC++ + A++V++EM
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAK-DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE 413
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++ T+ I+ G G+I +A V D + +G++PD T+ L+DGY K +L
Sbjct: 414 EGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDS 473
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++ M G+ P+ +TY ++ CK K+ E ++M+ + P++ +I+
Sbjct: 474 ALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIE 533
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
C+ ++E+A + R+ + +PD +T+IH C+ G + A LF + E+G
Sbjct: 534 NFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSA 593
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ T+N LI + A +++ +M+ KG +P+++TY +L+ G CK N L
Sbjct: 594 TADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHL 653
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
EM+ KG P+ +F ++ L + E ++ + G V
Sbjct: 654 AEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVV 697
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 179/358 (50%), Gaps = 4/358 (1%)
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK 180
IR GR E AV R+ + V V + NTL+ L ++ + ++
Sbjct: 253 IRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ-G 310
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+P+ FT N +I CK ++ A +L + G VP+ VT+ +++ G GDIE A
Sbjct: 311 CIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERAL 370
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + + PD Y L+ G + G + A++VM+EM + G P+ TY ++I
Sbjct: 371 ELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGL 430
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK +A +++D + + Y+P +ID C+ K++ A +L +R+ PD
Sbjct: 431 CKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDV 490
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++++ LCK GK E + F+E +G P+ +TYN LI C+ +L EA +
Sbjct: 491 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M + G+ P+ ++N LI GFC+ G+ + +++ +KG +F++LI G Y S
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI-GAYSS 607
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 151/297 (50%), Gaps = 6/297 (2%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P+VFT N LI CK+ ++ A+++++ M + G+ P+++T+ ++L G G +
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
F +++ +G P+A TY +L++ + K+ +L +A V+ M +G+ P+ V++ +I FC
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ A L + ++ Y ++ +I + ++ A +++ ++ K PD
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631
Query: 362 ISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
++ LCK + A L + +G +PS+ T+ ++ + + ++EA + M
Sbjct: 632 TYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
V GV P V +L +I K ++EE++ KG + ++ +L EG+ ++
Sbjct: 692 VRMGVVPEVVD-TILSTDKKEIAAPK---ILVEELMKKGHISYR-AYEVLHEGVRDN 743
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 147/302 (48%), Gaps = 6/302 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+I Y + + A++ R+ + + V + N++LN L + + V+ F+
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K PN T NILI+ CK + +E A V+ M G+VP+ V+ T++ G+ GD+
Sbjct: 518 LK-GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDL 576
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A +F + ++G+ A T+ +L+ Y + A K+ EM G +P+ TY ++
Sbjct: 577 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRIL 636
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++ CK A L +M+ + +VPS A ++++LL +V +A + ++R
Sbjct: 637 VDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGV 696
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
+P+ + TI+ KE I K L +E + S Y L G+ ++ +LT R
Sbjct: 697 VPE--VVDTILSTDKKE--IAAPKILVEELMKKGHISYRAYEVLHEGVRDN-KLTRKARK 751
Query: 417 WD 418
D
Sbjct: 752 AD 753
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 6/276 (2%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT--YGVMIEAFCKGKKSGEARNLLD 314
Y L+ + GRL D + + + P+ + Y I+A+ + + A + +
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M P++ ++D L + A +++ R+L PD + + C G
Sbjct: 96 RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ A +L ERG Y T++ G+ A L+D+M+ + V P+V T+N
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
++ C+ G+ E +L ++L +G NK + ++ I GL E G E +V A
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275
Query: 494 GSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ + ++N L+ + D + A L ++ + C
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 186/345 (53%), Gaps = 2/345 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR + A++ F +E + V + N+L++ L + + V F N P+ FT
Sbjct: 1134 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEV-TWFLNLMVDRGFSPDAFT 1192
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
ILI LCK+ V A ++L+ M G P+++T+ T++ G G +E+A ++F +
Sbjct: 1193 FTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 1252
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
DRG + +Y +L++GY K ++ +A + +EM G++P+ VTY +I A C+ +
Sbjct: 1253 DRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 1312
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A+ L +M + C ++D LC+ G +E+A +L++ + + P+ + S ++
Sbjct: 1313 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILL 1372
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+C+ GK+ EA K FDE + + P + YN LI G+C L+EA +L M EKG
Sbjct: 1373 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
P+ T+N++IQ K E I++LEEM ++ P++ S+L+
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 196/392 (50%), Gaps = 39/392 (9%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ N LL ++ + Y V M++ + + P+++T NILI C V V
Sbjct: 948 TFNHLLASVAKLGYYSTVFPMYRKI-NDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGG 1006
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
G P+ VT TT++ G I +A ++F ++ +G + DA TY +L++G K +
Sbjct: 1007 FLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A+K+ ++M+ N + + TYG++I+A CK + EA ++ +M+ +P +
Sbjct: 1067 TGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125
Query: 331 VIDLLCEEGKVEDACE----------------------------LWKR-------LLRKN 355
++D LC G++++A E LWK ++ +
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD + +I LCKEGK+ EA+++ + +G P +LTYNTL+ G+C +L +A
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDAT 1245
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+L++ + ++G++ NVF+YN+LI G+CK E R EEM KG P+ +++ LI L
Sbjct: 1246 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305
Query: 475 YESGNEGEVGKV-VSMATASGSVESDSWNFLL 505
+SG K+ V M T ++ ++ LL
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 215/454 (47%), Gaps = 13/454 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + LV ++ + + A+Q+F K + TY +I+ L +AR
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTK--KGLLGDAKTYGILINGLCKARKTGLAI 1071
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L ++K N C ++F +I G A+ F + + V ++L+
Sbjct: 1072 KLHEKMKGN----CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L + R FK + + +V+T N LI L + + L+ M G
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGR-GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P+ T T ++ G G + A+++ + +G PD TY LM+G +G+L DA K
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ + + D G++ N +Y ++I +CK +K EA ++M + PS+ +I LC
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLL 395
+ G+V A +L+ + + ++ LCK G + EA LF ++ P++
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
++ L+ GMC + +L EA + +D++ + G+EP+ YN+LI G C G E +++L +M
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 1426
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+KGC P+ +F+++I+ L + E E+ + + +
Sbjct: 1427 EEKGCLPDSITFNVIIQNLLK---ENEIHEAIQL 1457
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 195/381 (51%), Gaps = 7/381 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G P+ AV+ F + K + ++ L+N L + ++ L + + + K +VFT
Sbjct: 1031 GIPD-AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCK--GDVFT 1087
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
++I ALCK A+ + EM G++P++V +++++ G G ++ A F ++
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
RG D TY L+ G + G + ++ M D G P+ T+ ++I+ CK K G
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 1207
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA+ +L+ M + P +++ LC G++EDA +L++ L + + + +I
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ CK+ KI EA + F+E +G PS +TYNTLI +C+S + A +L+ +M G
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 1327
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ TY +L+ G CK G+ +E + + + + PN FS+L++G+ +G E K
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 1387
Query: 487 VSMATASGSVESDS--WNFLL 505
+ +G +E D+ +N L+
Sbjct: 1388 FDEISKNG-LEPDTIAYNILI 1407
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 151/312 (48%), Gaps = 2/312 (0%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S + TY+S+IH L+RA + V L L + F +I G+ A
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLN-LMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + + + + NTL+N L + + +F++ + + NVF+ NILI
Sbjct: 1211 QILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNILING 1269
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK ++ A R +EM G+ P+ VT+ T++G G + A+++F ++ G
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+TY VL+DG K G L +A+ + ++ +PN + ++++ C+ K EA D
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
++ + P + +I+ LC +G + +A +L ++ K C+PD+ + II L KE
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449
Query: 375 KIWEAKKLFDEF 386
+I EA +L +E
Sbjct: 1450 EIHEAIQLLEEM 1461
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 8/297 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELK---QNPEIKCGENLFITVIRNYGLAGRP 130
FS + T+ +I L + + +L ++ + P+I + T++ L G+
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILT----YNTLMNGLCLVGQL 1241
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E A K F + ++ +V S N L+N ++++ D F+ R K + P+ T N
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK-GLKPSTVTYNT 1300
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI ALC+ V A ++ EM + G L T+ +L G G +E A +F I
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ +++L+DG + G+L +A K DE+ NG+EP+ + Y ++I C EA
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
LL M ++ +P S +I L +E ++ +A +L + + +N PD A++S ++
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ +A ++F L +P T+ L+ KLG + + ++ D G++P+ T +
Sbjct: 927 LNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNI 986
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I C + G + L+R + P + ++ + E + DA +L+ + +K
Sbjct: 987 LIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG 1046
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+ D +I+ LCK K A KL ++ + + TY +I +C+ TEA
Sbjct: 1047 LLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALD 1106
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++ +M+ G+ P+V Y+ L+ G C+ G KE + +EM +G + +++ LI GL
Sbjct: 1107 MFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLS 1166
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNF 503
+G EV +++ G D++ F
Sbjct: 1167 RAGLWKEVTWFLNLMVDRG-FSPDAFTF 1193
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 223/452 (49%), Gaps = 10/452 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++I + R ++ + ++ E++ E C N+ + T+I AG E A
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEMR---ETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+E + + + ++N L + R D + + ++PNV + LI +
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLL-DEMSCAGLMPNVVVYSTLIDGFMR 360
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + + A +++ EM + G+ PN +T+ ++ G G + A R+ + G++ D T
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++++G+++ +A +++EM G+ PN TY ++I C+ +S A LL+ M+
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
P++ + +I C EG ACE K++ R+N PD +++I L GK+
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMD 540
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA + +DE E+G P+ TY LI G + L +A +L M+ G+ PN F Y ++
Sbjct: 541 EAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQIL 600
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+G+ K N ++ L+ ML+KG P+ + ++I L SG+ V+S+ +G V
Sbjct: 601 EGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLV 660
Query: 497 -ESDSWNFLLTRI--VSDLDSGAGALDELLVK 525
+S + L++ +D++ G LDE+ K
Sbjct: 661 PDSLIYGSLISGFCKAADMEKAVGLLDEMAKK 692
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 209/465 (44%), Gaps = 38/465 (8%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++I R D ++ E+ ++ + + +IR GR A +
Sbjct: 347 NVVVYSTLIDGFMRQGNADEAFKIVKEMSA-AGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ K + N ++ ++ + L+ N K + PNV+T +I+I LC
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLL-NEMRKGGISPNVYTYSIIINGLC 464
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--------------------- 235
+ + E A +L++M + G+ PN + ++ GY G
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLY 524
Query: 236 --------------IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
++ A + ++L++G+ P+ TY L+ GY G L A +++ +M
Sbjct: 525 CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
++G+ PN+ Y ++E + K + + L ML++ +P + L VI L G +
Sbjct: 585 LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHM 644
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
+ A + + + +PD+ I ++I CK + +A L DE + I P + YN L
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNAL 704
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G C+S +++ A +++ ++ KG+ PN TY LI G+CK G+ ++ I + EML +G
Sbjct: 705 IDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGV 764
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
P+ +S+L G SG+ + + A G S+N L+
Sbjct: 765 APDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLV 809
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 71/370 (19%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+V+T + LI+A CK D+E A +V++EM G N+VT+ T++GG G IE A
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 241 RVFGDILDRGWVPDATT-----------------------------------YTVLMDGY 265
++ D G VPD T Y+ L+DG+
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV--- 322
++ G +A K++ EM GV+PN++TY +I CK + G A +L M + Y+
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418
Query: 323 --------------------------------PSSALCCKVIDLLCEEGKVEDACELWKR 350
P+ +I+ LC+ G+ E A L ++
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAE 409
++ P+ + + +I C+EG A + + R ++ P L YN+LI G+ +
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ EA +D+M+EKG +PN FTY LI G+ GN ++ ++L +ML+ G PN ++
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598
Query: 470 LIEGLYESGN 479
++EG ++S N
Sbjct: 599 ILEGYFKSDN 608
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 200/433 (46%), Gaps = 6/433 (1%)
Query: 52 FRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
RQ N + A + + K S N TY II+ L + + LL ++ + +K
Sbjct: 429 LRQHNKEEAFLLLNEMRK--GGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD-GLK 485
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
++ +I Y G LA +T ++ + N+ + N+L+ L + D
Sbjct: 486 PNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEY 545
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+ K PN FT LI ++E A ++L +M + G+ PN + IL GY
Sbjct: 546 YDEMLEK-GFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYF 604
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
++E +L++G +PD Y +++ G + AV V+ +E NG+ P+ +
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
YG +I FCK +A LLD+M ++ P + +ID C+ + A ++ +
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI 724
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAEL 410
+ K P+ +T+I CK G I +A L++E G P Y+ L AG S +L
Sbjct: 725 ICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDL 784
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A + ++M+ +G + ++N L+ GFCK G +E ++ L M+DK P+ + +
Sbjct: 785 QQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENI 843
Query: 471 IEGLYESGNEGEV 483
+ GL E+G E
Sbjct: 844 VIGLGEAGKLSEA 856
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 122/272 (44%), Gaps = 38/272 (13%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAV-------------------------------- 275
D+G P VL+D Y K GR+ D
Sbjct: 168 DQGRRP--VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALD 225
Query: 276 ---KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
KV ME G+ P+ TY +IEA+CK + A+ ++++M + + +I
Sbjct: 226 LLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLI 285
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSI 391
LC G +E+A K + +PD II+ LCK G+ +AK L DE G +
Sbjct: 286 GGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLM 345
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++ Y+TLI G EA ++ +M GV+PN TY+ LI+G CK+G RI
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
L++M G + +++L+IEG N+ E
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEA 437
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 164/411 (39%), Gaps = 81/411 (19%)
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
I +Y F N TY +IH + A + E LL ++ N + + ++ ++
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM-LNSGLNPNDFIYAQILE 601
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA--LVQNKRYDLVHLMFKNSRH--- 177
Y + N+++ +L ++L + N+ Y +V +S H
Sbjct: 602 GY---------------FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQA 646
Query: 178 ---------KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
K +VP+ LI CK D+E A+ +LDEM G+ P + + ++
Sbjct: 647 AVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALID 706
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G+ DI +A+ +F I+ +G P+ TYT L+DGY K G + DA+ + +EM GV P
Sbjct: 707 GFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAP 766
Query: 289 NEVTYGVM----------------------------------IEAFCKGKKSGEARNLLD 314
+ Y V+ + FCK K E L
Sbjct: 767 DAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLH 826
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M+ + VPS ++ L E GK+ +A ++ L +K NA H
Sbjct: 827 VMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK-----NASHRDTDHL----- 876
Query: 375 KIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
LF D +G +P + +N +I C+ L +A L D +V KG
Sbjct: 877 -----SSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKALMLHDALVAKG 921
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 240/502 (47%), Gaps = 44/502 (8%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
N D A+ F++ HP H + ++ I+ L + + SL +++ + E++
Sbjct: 37 HNADDAVSQFNHMFHVHPT-PHTFH-FNKILISLVNVKRYPTAISLYKQMELS-EVEPDY 93
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFK 173
+I + G+ LA +I K Q + +LNTL+ L ++ K + + K
Sbjct: 94 FTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDK 153
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
F++ + + ILI +CK + AIR+L + + PN+V ++ I+
Sbjct: 154 VLAQGFRL--SGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKD 211
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
++ A ++ +++ +G PD TY++L+ G+ +G+L A+ +++EM + P+ TY
Sbjct: 212 TLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTY 271
Query: 294 GVMIEAFCKGKKSGEARNLLDDML-----------------------------------Q 318
++++A CK K EA N+L M+ Q
Sbjct: 272 TILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQ 331
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P +I+ LC+ +V++A L++ + +KN +PD +++I LCK G+I
Sbjct: 332 MGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISY 391
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
LFDE +RG P ++TYN LI +C++ L A L++ M ++ + PNV+T+ +L+
Sbjct: 392 VWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G CK+G K + +++L KG N +++++I GL + G E + S +G +
Sbjct: 452 GLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCI- 510
Query: 498 SDSWNF-LLTRIVSDLDSGAGA 518
SD+ F ++ R D D A
Sbjct: 511 SDAVTFEIMIRAFFDKDENDKA 532
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 184/368 (50%), Gaps = 2/368 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G A++ RIE+++++ +V + +++ L ++ D + ++ K + P+V T
Sbjct: 177 GETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK-GISPDVVT 235
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+IL+ C + AI +L+EM + P++ T+T ++ G ++ A+ V ++
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
D Y+ LMDGY + + +A +V M GV P+ Y +MI CK K+
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA NL +++ Q+ VP + +ID LC+ G++ +L+ +L + PD + +I
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK G + A LF++ + +I P++ T+ L+ G+C+ L A + D++ KG
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYC 475
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
NV TY ++I G CK G E + + M D GC + +F ++I ++ + K+
Sbjct: 476 LNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKL 535
Query: 487 VSMATASG 494
V A G
Sbjct: 536 VREMIARG 543
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y +I+ L + + D +L E+ Q + + ++I +GR F +
Sbjct: 341 YSIMINGLCKIKRVDEALNLFEEIHQKNMVP-DTVTYTSLIDCLCKSGRISYVWDLFDEM 399
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V + N L++AL +N D +F + + + PNV+T IL+ LCK
Sbjct: 400 LDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQ-AIRPNVYTFTILLDGLCKVGR 458
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ ++ + G N+ T+T ++ G G ++ A + + D G + DA T+ +
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEI 518
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGV 286
++ + A K++ EM G+
Sbjct: 519 MIRAFFDKDENDKAEKLVREMIARGL 544
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 210/428 (49%), Gaps = 24/428 (5%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN------------------PEIKCGEN 115
F H+ ++Y + H L AR + S+L E+ + P +
Sbjct: 6 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDA 65
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF +I G E A++ F ++++F V RS N LL+ + + D V FK+
Sbjct: 66 LFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
P VFT NI+I +CK+ DVE A + +EM G+VP+ VT+ +++ G+ G
Sbjct: 122 IGA-GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++ F ++ D PD TY L++ + K G+L ++ EM+ NG++PN V+Y
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++AFCK +A DM + VP+ +ID C+ G + DA L +L+
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
+ + +I LC ++ EA++LF + + G IP+L +YN LI G ++ + A
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +++ +G++P++ Y I G C + + ++ EM + G N ++ L++
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420
Query: 475 YESGNEGE 482
++SGN E
Sbjct: 421 FKSGNPTE 428
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 195/405 (48%), Gaps = 10/405 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I + + +A L E+K + + ++I +G GR + V F
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP-DTVTYNSMIDGFGKVGRLDDTVCFFEE 190
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ + V + N L+N + + + L F + PNV + + L+ A CK+
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLP-IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 249
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ +M +G+VPN T+T+++ G++ +A R+ ++L G + TYT
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 309
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG R+ +A ++ +M+ GV PN +Y +I F K K A LL+++ R
Sbjct: 310 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 369
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P L I LC K+E A + + ++ I +T++ K G E
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 429
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEA----GRLWDDMVEKGVEPNVFTYNM 434
L DE + I +++T+ LI G+C++ +++A R+ +D G++ N +
Sbjct: 430 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF---GLQANAAIFTA 486
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+I G CK + + E+M+ KG P++T+++ L++G ++ GN
Sbjct: 487 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 531
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 24/368 (6%)
Query: 172 FKNSRHKFKVVPNVFTCN-------------ILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
FK+S + +V ++ C +L KA C DV + R + VP
Sbjct: 6 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNV-------CVP 58
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ + G +E A + F + P + L+ + KLG+ D +
Sbjct: 59 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 118
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M G P TY +MI+ CK AR L ++M R VP + +ID +
Sbjct: 119 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 178
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTY 397
G+++D ++ + C PD + +I+ CK GK+ + + E + G P++++Y
Sbjct: 179 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 238
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+TL+ C+ + +A + + DM G+ PN +TY LI CKIGN + R+ EML
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIV--SDLDS 514
G N +++ LI+GL ++ E ++ +G + + S+N L+ V ++D
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358
Query: 515 GAGALDEL 522
L+EL
Sbjct: 359 ALELLNEL 366
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 191/400 (47%), Gaps = 10/400 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT---VIRNYGLAGRPELAVKT 136
TY+S+I + D E+K C E IT +I + G+ + ++
Sbjct: 167 TYNSMIDGFGKVGRLDDTVCFFEEMKD----MCCEPDVITYNALINCFCKFGKLPIGLEF 222
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ ++ ++ +V S +TL++A + + + R + +VPN +T LI A C
Sbjct: 223 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR-RVGLVPNEYTYTSLIDANC 281
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A R+ +EM +G+ N+VT+T ++ G ++ A+ +FG + G +P+
Sbjct: 282 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 341
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y L+ G++K + A+++++E++ G++P+ + YG I C +K A+ ++++M
Sbjct: 342 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 401
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ +S + ++D + G + L + + +I LCK +
Sbjct: 402 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 461
Query: 377 WEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+A F+ G + + +I G+C+ ++ A L++ MV+KG+ P+ Y
Sbjct: 462 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 521
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ G K GN E + + ++M + G + +++ L+ GL
Sbjct: 522 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+++IH +A+ D LL ELK IK L+ T I + E A
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVV 397
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+++ ++ + TL++A ++ + +HL+ + + + V T +LI L
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL--DEMKELDIEVTVVTFCVLIDGL 455
Query: 196 CKKDDVEGAIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK V A+ + + + G+ N T ++ G +E A +F ++ +G VPD
Sbjct: 456 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 515
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T YT LMDG K G + +A+ + D+M + G++ + + Y ++ + +AR+ L+
Sbjct: 516 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 575
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP---DNAI 362
+M+ P LC V+ E G +++A EL L++ + DNA+
Sbjct: 576 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNAL 626
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 130/324 (40%), Gaps = 73/324 (22%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+ V+ +V + L++ L +R +F V+PN+ + N LI K ++
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELF-GKMDTAGVIPNLASYNALIHGFVKAKNM 356
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A+ +L+E+ G+ P+L+ + T + G IE AK V ++ + G ++ YT L
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 416
Query: 262 MDGYIKLGRLTDAVKVMDEME------------------------------------DNG 285
MD Y K G T+ + ++DEM+ D G
Sbjct: 417 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 476
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
++ N + MI+ CK + A L + M+Q+ V
Sbjct: 477 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV----------------------- 513
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
PD ++++ K+G + EA L D+ E G LL Y +L+ G+
Sbjct: 514 ------------PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561
Query: 405 CESAELTEAGRLWDDMVEKGVEPN 428
+L +A ++M+ +G+ P+
Sbjct: 562 SHCNQLQKARSFLEEMIGEGIHPD 585
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/534 (27%), Positives = 233/534 (43%), Gaps = 63/534 (11%)
Query: 27 STITVTPPIKPWPQRLYPKRL------------VSMIFRQQ-NLDLALQIFHYAGKFHPN 73
S + P P P+ + P L + +I QQ N AL F++A +PN
Sbjct: 31 SCLETLNPQNPNPKHINPTHLNQFSPHLDSNLVIEVIKEQQPNPYQALFFFNWASNLNPN 90
Query: 74 ---FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
+SHN+ Y +II L F ++LL + ++ L +IR YG +G
Sbjct: 91 PNNYSHNHRCYVAIIDLLLSHSLFPIAKNLLEKHGTFSDL-----LVSKLIRAYGYSGDT 145
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A+ F ++++ + + S N +L LV+ + ++ F + V P+ T
Sbjct: 146 KSAIFWFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTT 205
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD-R 249
+I+ CK ++ A +V DEM PNL+T T++ GY +GD+ENA+ +++ +
Sbjct: 206 MIRGFCKVGMIDNARKVFDEMICE---PNLITCNTLINGYCKKGDMENARIFLCRMMESK 262
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
+PD TY+ L+DGY K G L +A K MD M G PN TY +I C EA
Sbjct: 263 DCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEA 322
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
R LL M + A ++ L GK E+A + ++RK D +I
Sbjct: 323 RRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITA 382
Query: 370 LCKEGKIWEAKKLFDEFER------------------------------------GSIPS 393
CK K EA L E + G +P+
Sbjct: 383 YCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPN 442
Query: 394 LLTYNTLIAGMCES-AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
L++Y+T+I G+C S + E L DDM++ G E + Y+ L+ GFC+ GN + +R
Sbjct: 443 LVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAF 502
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFLL 505
+ ++K N SFS + + G E ++ M V+ DS+ +L
Sbjct: 503 YDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIFKDMCRRCSLVDVDSYQRVL 556
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 231/546 (42%), Gaps = 88/546 (16%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P ++P L PK + S+I N L + F +A F +++ I L
Sbjct: 48 PALEPMVPFLSPKIVTSIIQNPPNPQLGFRFFIWASNFKR--FRAWESCDLITDLLINQN 105
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+ L LK N IK + F +I+ Y G + A++TF + F+ V +
Sbjct: 106 GLELYCQTLEALK-NGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTY 164
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N +L+ L+Q K + L+ L K +PNV T +ILI LCK +V+ A+ + DEM
Sbjct: 165 NMILDVLIQ-KNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMT 223
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G++P+ T+ ++ G +++A R+F + D G PD T L++G+ L R+
Sbjct: 224 QRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVD 283
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A ++ E +G + Y +I + K+ + + L M++ P L ++
Sbjct: 284 EAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMM 343
Query: 333 DLLCEEGKVEDACELWKRLL-----------------------------------RKNCM 357
L E GKV DA EL + R +C
Sbjct: 344 KGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCF 403
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRL 416
P+ S +I +C+ G +A+++F+E E+ G PS +T+N+LI G+C++ +L +A L
Sbjct: 404 PNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLL 463
Query: 417 W----------------------------DDMVEK--------------------GVEPN 428
+ MVE+ G P
Sbjct: 464 FYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPG 523
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
++TYN+L+ GFCK+GN ++ EM KG P+ ++ LI GL E + KV
Sbjct: 524 IYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFD 583
Query: 489 MATASG 494
+G
Sbjct: 584 QMEKNG 589
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 175/395 (44%), Gaps = 28/395 (7%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y +I L RA+ ++ V+ L ++ ++ +K L+ +++ AG+ A++ +
Sbjct: 304 YSCLIRGLFRAKRYEDVQLLYRKMIED-NVKPDVYLYTIMMKGLAEAGKVRDALELLNEM 362
Query: 141 EKFNVQRSVRSLNTLLNA-----LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ V N L+ L+ R L + SRH PNV T +ILI +
Sbjct: 363 TESGVVPDTVCYNVLIKGFCDMGLLSEAR----SLQLEISRHD--CFPNVKTYSILISGM 416
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI--------- 246
C+ A + +EM +G P+ VT +++ G G +E A +F +
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLF 476
Query: 247 --LDRG--WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
L +G V D+ + +++ G + A +++ ++ D+G P TY +++ FCK
Sbjct: 477 LRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCK 536
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A L +M + P + +I+ L + EDA +++ ++ + C PD A+
Sbjct: 537 LGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAV 596
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T++ W+C+ ++ A L+ ++ R I G E E+ +A R +M
Sbjct: 597 YRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDF 656
Query: 423 KGVEPNVFTYNMLIQGFC---KIGNAKEGIRILEE 454
K + ++ Y + + G C ++G A + ILEE
Sbjct: 657 KLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEE 691
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P ++T NIL+ CK + GA ++ EM G+ P+ VT+ T++ G + E+A +V
Sbjct: 522 PGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKV 581
Query: 243 FGDILDRGWVPDATTYTVLM----------------------------------DGYIKL 268
F + G PDA Y +M +GY +
Sbjct: 582 FDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEK 641
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+ AV+ + EM+ + + Y + + C+ ++ GEA + + + K V + C
Sbjct: 642 QEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCC 701
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
K+I L +EG ++ A +++ + K + +++ I+ L +
Sbjct: 702 VKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVR 745
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 164/295 (55%), Gaps = 1/295 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PNV+T NIL++ALC + + A+ +L +M G PN+VT+ T++ + G+++ A+
Sbjct: 186 VAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 245
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R+ G + + G P+ T+ +++G K G++ DA KV DEM G+ P+ V+Y ++ +
Sbjct: 246 RLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGY 305
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK S EA ++ +M Q+ +P +I ++C+ G +E A L +++ + +
Sbjct: 306 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNE 365
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I CK+G + +A ++ I PS++ YN LI G C + EA L +
Sbjct: 366 VTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 425
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M KG++P+V TY+ +I +CK + + ++ML+KG P+ ++S LI L
Sbjct: 426 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 480
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 167/365 (45%), Gaps = 45/365 (12%)
Query: 148 SVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
+V + NTL+ A + D LV +M + + PN+ T N ++ +CK +E
Sbjct: 224 NVVTYNTLVAAFFRAGEVDGAERLVGMMREGG-----LKPNLVTFNSMVNGMCKAGKMED 278
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT---- 259
A +V DEM G+ P+ V++ T++GGY G A VF ++ +G +PD T+T
Sbjct: 279 ARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIH 338
Query: 260 -------------------------------VLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
L+DG+ K G L DA+ + M+ ++P
Sbjct: 339 VMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP 398
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V Y +I +C + EAR LL +M + P +I C+ A EL
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 458
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
+++L K +PD S++I LC E ++ +A LF + G P TY +LI G C+
Sbjct: 459 QQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 518
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ A L D MV+ GV P+V TY++LI G K A E ++L ++ + P T +
Sbjct: 519 GNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKY 578
Query: 468 SLLIE 472
L+
Sbjct: 579 DALMH 583
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 189/427 (44%), Gaps = 59/427 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y++++ +A S+ E+ Q P++ F ++I AG E AV
Sbjct: 297 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT----FTSLIHVMCKAGNLERAVTL 352
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + +Q + + L++ + D L + + + ++ P+V N LI C
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK-QCRIKPSVVCYNALINGYC 411
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ A +L EM + G+ P++VT++TI+ Y D +A + +L++G +PDA
Sbjct: 412 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 471
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY+ L+ RL+DA + M G++P+E TY +I+ CK
Sbjct: 472 TYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK-------------- 517
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
EG VE A L ++++ +PD S +I+ L K +
Sbjct: 518 ---------------------EGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 556
Query: 377 WEAKK-LFDEFERGSIPSLLTYN---------------TLIAGMCESAELTEAGRLWDDM 420
EA++ LF + IP+ Y+ L+ G C + EA +++ M
Sbjct: 557 MEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM 616
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+++ + Y++LI G C+ GN + + ++ML G PN TS LI GL+E+G
Sbjct: 617 LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMV 676
Query: 481 GEVGKVV 487
E +V+
Sbjct: 677 VEADQVI 683
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 120/230 (52%), Gaps = 2/230 (0%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+VP Y ++ + LT A + D M +GV PN TY +++ A C EA
Sbjct: 151 GYVPSVLAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
++L DM P+ ++ G+V+ A L + P+ +++++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 370 LCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
+CK GK+ +A+K+FDE R G P ++YNTL+ G C++ EA ++ +M +KG+ P+
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
V T+ LI CK GN + + ++ +M ++G N+ +F+ LI+G + G
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 379
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
YVPS L + L + + A + +L P+ + ++ LC G EA
Sbjct: 152 YVPS-VLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ + G P+++TYNTL+A + E+ A RL M E G++PN+ T+N ++ G
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
CK G ++ ++ +EM+ +G P+ S++ L+ G ++G E V + T G
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 223/453 (49%), Gaps = 8/453 (1%)
Query: 47 LVSMIFRQ-QNLDLALQIFHYAGKFHPNFSHNYDTY--HSIIHKLARARAFDAVESLLTE 103
+ +F Q + L L F +A K S++ D + S++ LAR R F +E+LL
Sbjct: 63 IAHFVFDQIHDPRLGLNFFEWASK-QSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLET 121
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQN 162
+K I E L VI Y +G + A++ + I+ N V + N+LLN LV +
Sbjct: 122 MKSKELIPTCEALSF-VISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHH 180
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ ++ ++ + V N C I+ K LCK+ VE ++++ G VPN+V
Sbjct: 181 GKVEIARKVYDEMVDRNGDVDNYTVC-IVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVF 239
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ T++ GY GDIE A +F ++ +G++P TY +++ + K G+ K++ EM+
Sbjct: 240 YNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMK 299
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+ G+ + + +I+A K EA + + M++ P A +I+ C +GKV
Sbjct: 300 ERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVR 359
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
+A EL + +R+ P+ + +IH K G+ A +L E ERG L+ Y L+
Sbjct: 360 EAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALV 419
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ + E+ A + D M+E+G+ P+ YN+L+ G CK G ++L EMLD+
Sbjct: 420 HGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVT 479
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
P+ + L++G GN E K+ + G
Sbjct: 480 PDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 3/396 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I+ + F+AV+ LL E+K+ + +F +I G A
Sbjct: 274 TYGAMINAFCKKGKFEAVDKLLVEMKERG-LAVSLQIFNGIIDARFKHGCEIEAADAVRW 332
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + + NTL+N + + +++ + + PN F+ LI A K
Sbjct: 333 MIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRR-GLFPNKFSYTPLIHAFSKNG 391
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A +L EM G +L+ + ++ G V G+++ A V +++RG +PDA Y
Sbjct: 392 EYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYN 451
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VLM G K GR A +++ EM D V P+ +++ F + EA+ L ++R
Sbjct: 452 VLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIER 511
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
S C +I C+ G + DA +KR+ PD STII K+ + A
Sbjct: 512 GIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGA 571
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++F ++ P+++T+ +LI G C + +L A +++++M G EPNV TY +LI
Sbjct: 572 LRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGY 631
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
FCK G + E+ML C PN +F+ L+ GL
Sbjct: 632 FCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 25/368 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y +++H L A D ++ ++ + I N++ ++ GR A + +
Sbjct: 414 AYGALVHGLVVAGEVDVALTVRDKMMERG-ILPDANIYNVLMSGLCKKGRFPAAKQLLVE 472
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ NV TL++ +++ D +F+ + + + +V CN +IK CK
Sbjct: 473 MLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIER-GIDTSVVECNAMIKGYCKYG 531
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A+ M + P+ T++TI+ GYV + D+ A R+FG +L + P+ T+T
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G+ + G L A KV +EM G EPN VTY ++I FCK K +A + ML
Sbjct: 592 SLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLIN 651
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
K +P+ A +++ L + + + R N P+ ++ + +G W
Sbjct: 652 KCIPNDATFNYLVNGLTNNNGIAISSK------RSNSQPN--LTLEFFGMMISDGWDWR- 702
Query: 380 KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ YN+++ +C+ + A +L D M+ KG P+ ++ L+ G
Sbjct: 703 --------------IAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGL 748
Query: 440 CKIGNAKE 447
C G ++
Sbjct: 749 CLEGRLQD 756
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 224/497 (45%), Gaps = 88/497 (17%)
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA----GRPELAVKTFLRIEKFN 144
A R DA++ +L + Q + C N+F I GL + L + + + +
Sbjct: 138 ADKRTSDAMDIVLRRMTQ---LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 145 VQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V S T++N + +K Y H M ++PNV T + +I ALCK
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG-----ILPNVVTYSSIIAALCKAQA 249
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ VL M G++PN T+ +I+ GY G + A + G PD TY
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-- 318
LMD K GR T+A K+ D M G++P TYG +++ + E LLD M++
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 319 ---RKYVPSSALCC------------------------------KVIDLLCEEGKVEDAC 345
YV S +C VI +LC+ G+VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWL----------------------------------- 370
+++++ + P N + +++IH L
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CKEG++ E++KLFD R G P ++TY+TLI G C + ++ EA +L MV G++P+
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN LI G+CKI ++ + + EM G P+ +++++++GL+++ ++
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 490 ATASGS-VESDSWNFLL 505
T SG+ +E ++N +L
Sbjct: 610 ITESGTQLELSTYNIIL 626
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 212/438 (48%), Gaps = 7/438 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ F++ +LD A +H N TY SII L +A+A D
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 99 SLLTELKQNPEI-KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+LT + +N + C + +++ Y +G+P+ A+ ++ V+ V + N+L++
Sbjct: 255 EVLTSMVKNGVMPNC--RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L +N R MF +S K + P + T L++ K + +LD M G+
Sbjct: 313 YLCKNGRCTEARKMF-DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN + ++ Y +G ++ A VF + +G PD TY ++ K GR+ DA++
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++M D + P + Y +I + C K +A+ L+ +ML R + +ID C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
EG+V ++ +L+ ++R PD ST+I C GK+ EA KL G P +T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNTLI G C+ + + +A L+ +M GV P++ TYN+++QG + + +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 457 DKGCFPNKTSFSLLIEGL 474
+ G +++++++ GL
Sbjct: 612 ESGTQLELSTYNIILHGL 629
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 39/338 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
+V PN+ T ILI K LC A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW--VPDATTYTVL 261
+ VL M +G +PN+ ++ +L G + A + + D G PD +YT +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++G+ K G L A EM D G+ PN VTY +I A CK + +A +L M++
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P+ ++ C G+ ++A K++ PD ++++ +LCK G+ EA+K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+FD +RG P + TY TL+ G L E L D MV G+ PN + +++LI +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G + + + +M +G P+ ++ +I L +SG
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 128/247 (51%), Gaps = 4/247 (1%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TY +L+ GRL + + G + + + +++ C K++ +A +
Sbjct: 88 TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIH 368
+ L M Q +P+ ++ LC+E + ++A EL + + +C PD +T+I+
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
KEG + +A + E +RG +P+++TY+++IA +C++ + +A + MV+ GV P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TYN ++ G+C G KE I L++M G P+ +++ L++ L ++G E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 488 SMATASG 494
T G
Sbjct: 328 DSMTKRG 334
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTFLR 139
Y+S+IH L +D + L+ E+ C + +F ++I ++ GR + K F
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V+ + + +TL++ + D + S + P+ T N LI CK
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA-SMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A+ + EM S G+ P+++T+ IL G AK ++ I + G + +TY
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++ G K +A+++ + ++ T+ +MI A K ++ EA++L +
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP + + L E+G +E+ +L+ + C ++ + ++I+ L + G I A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 41/157 (26%)
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG---VEPNVFTYN 433
+A+ +FDE RG S+ N +A + + R ++ M G V PN+ TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTYG 95
Query: 434 MLIQ----------GFCKIGNA-KEGIR-------------------------ILEEMLD 457
+LI GF +GN K+G R +L M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
GC PN S+++L++GL + E +++ M G
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDG 192
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 197/405 (48%), Gaps = 10/405 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKN 174
T+I GR A++ R++ VQ + N +++ + + N +DL M
Sbjct: 180 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 239
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
++ P+ FTCN LI C ++ A+ +L +M + P + T + ++ + G
Sbjct: 240 -----RISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEG 294
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ AK + G + + + D TY LMDGY + + A + D M GV N +Y
Sbjct: 295 KVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYT 354
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
MI CK K EA NL ++M RK +P+ +ID L + GK+ +L + +
Sbjct: 355 TMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDR 414
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
P+ ++I+ LCK + +A L ++G P + TY LI G+C+S +L +A
Sbjct: 415 GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDA 474
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
++++D++ KG +V+TY ++IQGFC G + +L +M D GC PN ++ ++I
Sbjct: 475 QKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILS 534
Query: 474 LYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGA 518
L+E K++ A G ++ S+ +L ++ + GA
Sbjct: 535 LFEKDENDMAEKLLREMIARGLLDEKSYIYLASKETGVMGMGAAG 579
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 173/339 (51%), Gaps = 8/339 (2%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ N +L++LV+ K + L +V + FT NILI + + V
Sbjct: 70 IIQFNKILSSLVKAKHHSTA-LSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVF 128
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
++ G PN +T T++ G +G I A ++ +G+ D +Y L++G K+
Sbjct: 129 GKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKV 188
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR+T A++++ ++ V+PN V Y ++I+ CK K +A +L M+ ++ P C
Sbjct: 189 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTC 248
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFE 387
+I C G++++A L +++ +N P S ++ CKEGK+ EAK + +
Sbjct: 249 NSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMK 308
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+ I ++TYN+L+ G C E+ +A ++D M +GV NV +Y +I G CKI E
Sbjct: 309 KDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDE 368
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ + EEM + PN +++ LI+GL G++GK+
Sbjct: 369 AVNLFEEMRCRKIIPNVVTYNSLIDGL------GKLGKI 401
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 171/350 (48%), Gaps = 11/350 (3%)
Query: 81 YHSIIHKLARAR----AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+ II + +A+ AFD ++ + + C ++I + + G+ + AV
Sbjct: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCN-----SLIYGFCIMGQLKEAVGL 267
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ N+ + + + L++A + + +M + K ++ +V T N L+ C
Sbjct: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK-DIILDVVTYNSLMDGYC 326
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ A + D M S G++ N+ ++TT++ G ++ A +F ++ R +P+
Sbjct: 327 LVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVV 386
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+DG KLG+++ +K++DEM D G PN +TY +++A CK +A LL ++
Sbjct: 387 TYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL 446
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P +I LC+ GK+EDA ++++ LL K D + +I C +G
Sbjct: 447 KDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLF 506
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
A L + E G IP+ TY +I + E E A +L +M+ +G+
Sbjct: 507 DAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ P ++ +N +++ + ++ + A L M G+ + FT+N+LI F ++G
Sbjct: 63 HKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNS 122
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ ++L KG PN +F+ LI+GL G+
Sbjct: 123 LSFSVFGKILKKGFDPNAITFNTLIKGLCLKGH 155
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 42/187 (22%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+SI+ L + D +LLT LK + I+ + +I+ +G+ E A K
Sbjct: 419 NIITYNSILDALCKNHHVDKAIALLTNLK-DQGIRPDMYTYTVLIKGLCQSGKLEDAQKV 477
Query: 137 F--LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F L ++ +N+ +V+T ++I+
Sbjct: 478 FEDLLVKGYNL--------------------------------------DVYTYTVMIQG 499
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
C K + A+ +L +M G +PN T+ ++ + + + A+++ +++ RG + D
Sbjct: 500 FCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL-D 558
Query: 255 ATTYTVL 261
+Y L
Sbjct: 559 EKSYIYL 565
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 207/429 (48%), Gaps = 27/429 (6%)
Query: 91 ARAFDAVESLLTELKQNPEIKC---GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
+ F V SLL L + I C L+ ++I Y +G ELAV F ++ +
Sbjct: 57 SSPFFTVSSLLENLTEPISIPCPKISSLLYESIISVYIQSGSIELAVLYFNQMVDKGLVF 116
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
NTLL++LV++K ++ + +F + K ++ +V+T I+IK C+ +
Sbjct: 117 EPNIFNTLLDSLVKSKCFEKLWFVFNEVKGKIEL--DVYTYGIMIKGCCEAGVFYKGFEL 174
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L ++ MG+ PN+V +TT++ G GD+ AK +F + + V + TYTVL++G+ K
Sbjct: 175 LTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLINGFFK 234
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G D ++ ++M+ +GV PN TY MI FC K +A L D+M +R V +
Sbjct: 235 KGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVT 294
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLR---------------------KNCMPDNAISSTI 366
+I LC + ++ +A +L ++ R + P + +
Sbjct: 295 YNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTIL 354
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ + G + +A + E+ G +P + Y L+ G+C + EA +L+ M E +
Sbjct: 355 TNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKL 414
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
EPN YN +I G+CK GN+ +R L+EM DK PN S+S I L + G E
Sbjct: 415 EPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEI 474
Query: 486 VVSMATASG 494
+++ SG
Sbjct: 475 LLNKMRGSG 483
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 204/464 (43%), Gaps = 81/464 (17%)
Query: 1 MLRHLHQKITAPSCLLQSIGGARCSLSTITVTPPIK-PWPQ--RLYPKRLVSMIFRQQNL 57
+L+ L +I++P + S+ +T PI P P+ L + ++S+ + ++
Sbjct: 48 LLQILSNRISSPFFTVSSL--------LENLTEPISIPCPKISSLLYESIISVYIQSGSI 99
Query: 58 DLALQIFHYAGK----FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK-- 111
+LA+ F+ F PN +++++ L +++ F+ + + E+K E+
Sbjct: 100 ELAVLYFNQMVDKGLVFEPNI------FNTLLDSLVKSKCFEKLWFVFNEVKGKIELDVY 153
Query: 112 ---------CGENLF------ITVIRNYGLAGRPELAVKTFLR---IEKFNVQRSVRSLN 153
C +F +T + GL+ P + + T L + +V+R+ N
Sbjct: 154 TYGIMIKGCCEAGVFYKGFELLTDLEKMGLS--PNVVIYTTLIDGCCKNGDVRRAKLLFN 211
Query: 154 TL--LNALVQNKRYD-LVHLMFKNSRHK-----FK------VVPNVFTCNILIKALCKKD 199
+ +N + Y L++ FK K F+ V PN++T N +I C +
Sbjct: 212 KMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEG 271
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGY-----VWRGD--IENAKRV-------FGD 245
+ A + DEM G+V N+VT+ T++ G +W + ++ KR + D
Sbjct: 272 KLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVD 331
Query: 246 ILD-------RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+ D RG P TYT+L + +++LG + A ME G+ P+ YGV++
Sbjct: 332 VTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLH 391
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C EA L M + K P+ + +I+ C+ G A K + K +P
Sbjct: 392 GLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVP 451
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IPSLLTYNTL 400
+ A S+ I LCK+GK EA+ L ++ RGS PS+ YN +
Sbjct: 452 NVASYSSTIGILCKDGKWQEAEILLNKM-RGSGLEPSVSIYNII 494
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 37/280 (13%)
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ +I+ Y+ G IE A F ++D+G V + + L+D +K V +E++
Sbjct: 86 YESIISVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNEVK 145
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+E + TYG+MI+ CE G
Sbjct: 146 GK-IELDVYTYGIMIKG-----------------------------------CCEAGVFY 169
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
EL L + P+ I +T+I CK G + AK LF++ E + + TY LI
Sbjct: 170 KGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVLI 229
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + + L++ M GV PN++TYN +I FC G + + +EM +G
Sbjct: 230 NGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVV 289
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
N +++ LI GL E K+V +G +W
Sbjct: 290 SNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNW 329
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F +S K +VP+V +L+ LC K +++ A ++ M M + PN V + T++ GY
Sbjct: 370 FYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYC 429
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G+ A R ++ D+ VP+ +Y+ + K G+ +A ++++M +G+EP+
Sbjct: 430 KAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVS 489
Query: 292 TYGVMIEA 299
Y ++ +A
Sbjct: 490 IYNIISKA 497
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 224/497 (45%), Gaps = 88/497 (17%)
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA----GRPELAVKTFLRIEKFN 144
A R DA++ +L + Q + C N+F I GL + L + + + +
Sbjct: 138 ADKRTSDAMDIVLRRMTQ---LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 145 VQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V S T++N + +K Y H M ++PNV T + +I ALCK
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG-----ILPNVVTYSSIIAALCKAQA 249
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ VL M G++PN T+ +I+ GY G + A + G PD TY
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-- 318
LMD K GR T+A K+ D M G++P TYG +++ + E LLD M++
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 319 ---RKYVPSSALCC------------------------------KVIDLLCEEGKVEDAC 345
YV S +C VI +LC+ G+VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWL----------------------------------- 370
+++++ + P N + +++IH L
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CKEG++ E++KLFD R G P ++TY+TLI G C + ++ EA +L MV G++P+
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN LI G+CKI ++ + + EM G P+ +++++++GL+++ ++
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 490 ATASGS-VESDSWNFLL 505
T SG+ +E ++N +L
Sbjct: 610 ITESGTQLELSTYNIIL 626
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 212/438 (48%), Gaps = 7/438 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ F++ +LD A +H N TY SII L +A+A D
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 99 SLLTELKQNPEI-KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+LT + +N + C + +++ Y +G+P+ A+ ++ V+ V + N+L++
Sbjct: 255 EVLTSMVKNGVMPNC--RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L +N R MF +S K + P + T L++ K + +LD M G+
Sbjct: 313 YLCKNGRCTEARKMF-DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN + ++ Y +G ++ A VF + +G PD TY ++ K GR+ DA++
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++M D + P + Y +I + C K +A+ L+ +ML R + +ID C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
EG+V ++ +L+ ++R PD ST+I C GK+ EA KL G P +T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNTLI G C+ + + +A L+ +M GV P++ TYN+++QG + + +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 457 DKGCFPNKTSFSLLIEGL 474
+ G +++++++ GL
Sbjct: 612 ESGTQLELSTYNIILHGL 629
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 39/338 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
+V PN+ T ILI K LC A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW--VPDATTYTVL 261
+ VL M +G +PN+ ++ +L G + A + + D G PD +YT +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++G+ K G L A EM D G+ PN VTY +I A CK + +A +L M++
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P+ ++ C G+ ++A K++ PD ++++ +LCK G+ EA+K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+FD +RG P + TY TL+ G L E L D MV G+ PN + +++LI +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G + + + +M +G P+ ++ +I L +SG
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 128/247 (51%), Gaps = 4/247 (1%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TY +L+ GRL + + G + + + +++ C K++ +A +
Sbjct: 88 TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIH 368
+ L M Q +P+ ++ LC+E + ++A EL + + +C PD +T+I+
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
KEG + +A + E +RG +P+++TY+++IA +C++ + +A + MV+ GV P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TYN ++ G+C G KE I L++M G P+ +++ L++ L ++G E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 488 SMATASG 494
T G
Sbjct: 328 DSMTKRG 334
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTFLR 139
Y+S+IH L +D + L+ E+ C + +F ++I ++ GR + K F
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V+ + + +TL++ + D + S + P+ T N LI CK
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA-SMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A+ + EM S G+ P+++T+ IL G AK ++ I + G + +TY
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++ G K +A+++ + ++ T+ +MI A K ++ EA++L +
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP + + L E+G +E+ +L+ + C ++ + ++I+ L + G I A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 46/191 (24%)
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG---VEPNVFTYN 433
+A+ +FDE RG S+ N +A + + R ++ M G V PN+ TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTYG 95
Query: 434 MLIQ----------GFCKIGNA-KEGIR-------------------------ILEEMLD 457
+LI GF +GN K+G R +L M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS---VESDSWNFLLTRIV--SDL 512
GC PN S+++L++GL + E +++ M G + S+ ++ DL
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 513 DSGAGALDELL 523
D G E+L
Sbjct: 216 DKAYGTYHEML 226
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 167/318 (52%), Gaps = 3/318 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K+ PNV T N LI C ++ A+ +L+EM + PN+ T ++ G G+++ A
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKA 283
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
V ++ +G P+ TYT LMDGY + + A V + + GV PN +Y VMI
Sbjct: 284 TSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMING 343
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK K EA L +M + P++ +ID LC+ G++ D +L + + P
Sbjct: 344 LCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG-QPA 402
Query: 360 NAIS-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
N I+ +++++ LCK ++ +A L + + G P + TY TL+ G+C++ L +A R++
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D++ KG N+ Y ++I G CK G E + +L +M D GC P+ ++ LI L+++
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKN 522
Query: 478 GNEGEVGKVVSMATASGS 495
G+ K++ A S
Sbjct: 523 NKNGKAVKLLREMIARES 540
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 191/377 (50%), Gaps = 1/377 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T++R L G+ + A+ + + S TL+N L ++ + +
Sbjct: 128 TLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGL 187
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P+V +I + CK V A + EM + PN+VT +++ G+ G ++
Sbjct: 188 LLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKE 247
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + ++ P+ T+ +L+DG K G + A V+ M GVEPN VTY +++
Sbjct: 248 AVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMD 307
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ K+ +A+++ + + R P+ +I+ LC+ V++A +L+K + KN P
Sbjct: 308 GYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP 367
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ S++I LCK G+I + L DE RG +++TYN+L+ G+C++ ++ +A L
Sbjct: 368 NTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL 427
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M ++G++P++ TY L+ G CK G K+ RI +++L KG N ++++I GL +
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487
Query: 478 GNEGEVGKVVSMATASG 494
G E ++S +G
Sbjct: 488 GFFDEALSLLSQMEDNG 504
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F + H P +F N ++ +L K + + AI +M G+ P + T ++ +
Sbjct: 40 FNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFS 99
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+ A + IL G+ PD T L+ G G++ +A+ D + ++V
Sbjct: 100 HLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQV 159
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKR 350
+YG +I CK ++ A LL + V P + +ID C++ V DA +L+
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAE 409
++ K P+ +++I+ C G++ EA L +E ++ P++ T+N LI G+C+ E
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE 279
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ +A + M+++GVEPNV TY L+ G+ + + + + +G PN S+S+
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339
Query: 470 LIEGL 474
+I GL
Sbjct: 340 MINGL 344
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 8/284 (2%)
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD-RGWVPDATTYTVLMDGYIKLGR 270
P+ ++ N H L ++ ++++A F IL P + ++ +K+
Sbjct: 11 PNSFLLLNRRLHIQPLPSFI--DNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNH 68
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A+ +ME G++P T+ ++I F + A +++ +L+ Y P +
Sbjct: 69 FKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNT 128
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
++ LC GKV++A ++RK D T+I+ LCK G+ A +L + E
Sbjct: 129 LLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLL 188
Query: 391 I--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ P ++ Y +I C+ + +A L+ +M+ K + PNV T+N LI GFC +G KE
Sbjct: 189 LVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEA 248
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+ +L EM PN +F++LI+GL + EGEV K S+ +
Sbjct: 249 VGLLNEMSLNNVNPNVYTFNILIDGLCK---EGEVKKATSVLSV 289
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 113/192 (58%), Gaps = 9/192 (4%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTC 188
AVK F + N+ + + ++L++ L ++ R +DL+ + N+R + N+ T
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEI--NNRGQ---PANIITY 407
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N L+ LCK V+ AI +L +M G+ P++ T+TT++ G G +++A+R++ D+L
Sbjct: 408 NSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLC 467
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+G+ + YTV+++G K G +A+ ++ +MEDNG P+ VTY +I A K K+G+
Sbjct: 468 KGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGK 527
Query: 309 ARNLLDDMLQRK 320
A LL +M+ R+
Sbjct: 528 AVKLLREMIARE 539
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 199/386 (51%), Gaps = 6/386 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++R+ AG+P A++ ++ + N + NT++ R + + R
Sbjct: 44 FNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMR 99
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGD 235
+ + PN +T +I CK V+ A++V DEM + G V P V + ++GGY +G
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A +++RG TY +L+ GR T+A ++++EM G+ P+ TY +
Sbjct: 160 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 219
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I CK +A + ++M +R + +I L ++G+V++ +L+ +R+
Sbjct: 220 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG 279
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
PD + + +I+ G I A ++ E E+ I P +TYNTL+ G+C + EA
Sbjct: 280 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 339
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+L D+M ++G++P++ TYN LI G+ G+ K+ +RI EM++KG P +++ LI+GL
Sbjct: 340 KLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 399
Query: 475 YESGNEGEVGKVVSMATASGSVESDS 500
++G + +V +G DS
Sbjct: 400 CKNGQGDDAENMVKEMVENGITPDDS 425
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 20/371 (5%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q LD+ ++ G + N TY ++I + D + E+ E+K
Sbjct: 89 QAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVH 169
++ +I Y G+ + A+ R+ + V +V + N L++AL + R Y+LV
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
M + P+VFT NILI CK+ +V+ A+ + + M G+ +VT+T+++
Sbjct: 204 EMGGKG-----LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 258
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
+G ++ ++F + + RG PD Y L++ + G + A ++M EME + P+
Sbjct: 259 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 318
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+VTY ++ C + EAR L+D+M +R P +I +G V+DA +
Sbjct: 319 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 378
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
++ K P + +I LCK G+ +A+ + E E G P TY +LI G+
Sbjct: 379 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT--- 435
Query: 409 ELTEAGRLWDD 419
TE R DD
Sbjct: 436 --TEDERAIDD 444
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 224/497 (45%), Gaps = 88/497 (17%)
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA----GRPELAVKTFLRIEKFN 144
A R DA++ +L + Q + C N+F I GL + L + + + +
Sbjct: 138 ADKRTSDAMDIVLRRMTQ---LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGD 194
Query: 145 VQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V S T++N + +K Y H M ++PNV T + +I ALCK
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG-----ILPNVVTYSSIIAALCKAQA 249
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ VL M G++PN T+ +I+ GY G + A + G PD TY
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-- 318
LMD K GR T+A K+ D M G++P TYG +++ + E LLD M++
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 319 ---RKYVPSSALCC------------------------------KVIDLLCEEGKVEDAC 345
YV S +C VI +LC+ G+VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWL----------------------------------- 370
+++++ + P N + +++IH L
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CKEG++ E++KLFD R G P ++TY+TLI G C + ++ EA +L MV G++P+
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN LI G+CKI ++ + + EM G P+ +++++++GL+++ ++
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 490 ATASGS-VESDSWNFLL 505
T SG+ +E ++N +L
Sbjct: 610 ITESGTQLELSTYNIIL 626
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 212/438 (48%), Gaps = 7/438 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ F++ +LD A +H N TY SII L +A+A D
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 99 SLLTELKQNPEI-KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+LT + +N + C + +++ Y +G+P+ A+ ++ V+ V + N+L++
Sbjct: 255 EVLTSMVKNGVMPNC--RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L +N R MF +S K + P + T L++ K + +LD M G+
Sbjct: 313 YLCKNGRCTEARKMF-DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN + ++ Y +G ++ A VF + +G PD TY ++ K GR+ DA++
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++M D + P + Y +I + C K +A+ L+ +ML R + +ID C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
EG+V ++ +L+ ++R PD ST+I C GK+ EA KL G P +T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNTLI G C+ + + +A L+ +M GV P++ TYN+++QG + + +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 457 DKGCFPNKTSFSLLIEGL 474
+ G +++++++ GL
Sbjct: 612 ESGTQLELSTYNIILHGL 629
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 47/302 (15%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV-----MDEMEDNGVEPNEV 291
E+A+ VF ++L RG A+ Y L + R + A V M + V PN
Sbjct: 36 EDARHVFDELLRRGR--GASIYG-LNCALADVARHSPAAAVSRYNRMARAGADEVTPNLC 92
Query: 292 TYGV-----------------------------------MIEAFCKGKKSGEARNL-LDD 315
TYG+ M++ C K++ +A ++ L
Sbjct: 93 TYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRR 152
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIHWLCKE 373
M Q +P+ ++ LC++ + ++A EL + + +C PD +T+I+ KE
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + +A + E +RG +P+++TY+++IA +C++ + +A + MV+ GV PN TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
N ++ G+C G KE I L++M G P+ +++ L++ L ++G E K+ T
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 493 SG 494
G
Sbjct: 333 RG 334
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTFLR 139
Y+S+IH L +D + L+ E+ C + +F ++I ++ GR + K F
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V+ + + +TL++ + D + S + P+ T N LI CK
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA-SMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A+ + EM S G+ P+++T+ IL G AK ++ I + G + +TY
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++ G K +A+++ + ++ T+ +MI A K ++ EA++L +
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP + + L E+G +E+ +L+ + C ++ + ++I+ L + G I A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 223/452 (49%), Gaps = 19/452 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL----KQNPE------IKCGEN------LFITVIRN 123
Y I+H LA ++ F+ LTEL K E C ++ +F +++
Sbjct: 132 NYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKA 191
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
Y AG + +TF++I + SV + N LLN L+++ L ++ + V+P
Sbjct: 192 YVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVY-GEMGRVGVIP 250
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N +T NIL CK D++ L++M G P++VT+ T++ GY RG + +A ++
Sbjct: 251 NSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLY 310
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ R +PD +YT LM+G K GR+ +A +++ M G+ P+ V+Y +I +CK
Sbjct: 311 RIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKE 370
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K E+++LL +M+ P S C +I +EG + A L L + I
Sbjct: 371 GKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIY 430
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
++ LC+E + + AK L + +RG IP + YN LI +C+ + +A L ++V
Sbjct: 431 DYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVV 490
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ PN+ TY LI+ C++G + E +++EEML G P+ +I G + G+
Sbjct: 491 GNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGK 550
Query: 483 VGKVVSMATASGSV-ESDSWNFLLTRIVSDLD 513
++ + + +S+S++ L+ + D D
Sbjct: 551 AESLLVLFAKEFQIFDSESYSTLVRIVCEDGD 582
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
++L+ + + + P+++ + L+ +LC++D A +L+ M G +P++ + ++
Sbjct: 412 LNLVVELEKFGVSISPDIY--DYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLI 469
Query: 228 GGYVWRGD-IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +GD + +A + +I+ P+ TY L+ ++GR +A K+M+EM G+
Sbjct: 470 ES-LCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGL 528
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+P+ MI +C+ K +G+A +LL + + S ++ ++CE+G V E
Sbjct: 529 QPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFME 588
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
L +R+L+ P++ +I L K + + K + +
Sbjct: 589 LQERMLKVGFAPNSLTCKYMIDGLRKNVGLVKEKLILE 626
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 208/408 (50%), Gaps = 11/408 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N Y++IIH L + D +L E+K +P++ + +I + G E
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYT----YSILIHGFCKQGDVEKG 379
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILI 192
+ ++ N++ S+ S ++L + L + + D+ +F++ +K ++ ILI
Sbjct: 380 LYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYS--ILI 437
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K C + D++ A ++++EM + P+ +++ G+ G NA F +L+ G +
Sbjct: 438 KGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGIL 497
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P T V++D + + GR+ +A+ +M+EM+ G+ PN TY +I CK +KS A L
Sbjct: 498 PSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALEL 557
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
ML+R +PS + +ID ++ + A L+ R+L+ PD + +I+ LC
Sbjct: 558 FPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCH 617
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++ EA LF + E G P ++Y ++IAG C ++ +A L+++M+++G P V T
Sbjct: 618 RSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVT 677
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
Y L+ G+CK+ +++EM KG P+ ++++LI GN
Sbjct: 678 YTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGN 725
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 218/494 (44%), Gaps = 62/494 (12%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE--- 103
+V +F+ N ++A I FS + D + ++++ LA A V +LL +
Sbjct: 93 VVVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVC 152
Query: 104 ---------------LKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
L ++P+ + F +I+ + E AV FL+ +K ++
Sbjct: 153 YYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLEL 212
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD------DV 201
S RS N LL L + R + + +F+ + PNVFT I++ CK + D
Sbjct: 213 STRSCNFLLKCLAEANRREFLRSLFEEMKST-GPPPNVFTYTIMMNFYCKGNFGEADIDT 271
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
A +L+EM G P +VT++T + G G +E+A ++ + + Y +
Sbjct: 272 RQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAI 331
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ G K G L +A+KV++EM+ G+ P+ TY ++I FCK + L+++M
Sbjct: 332 IHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNM 391
Query: 322 VPS--------SALCCK---------------------------VIDLLCEEGKVEDACE 346
PS LC K +I C +G ++ A +
Sbjct: 392 EPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHK 451
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMC 405
L + ++R N PD + +++H CK G A + F+ E G +PS+ T N +I C
Sbjct: 452 LMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHC 511
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ EA L ++M +G+ PN+FTYN +I CK ++ + + ML + P+
Sbjct: 512 REGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVV 571
Query: 466 SFSLLIEGLYESGN 479
+S LI+G + N
Sbjct: 572 VYSTLIDGFAKQSN 585
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 184/382 (48%), Gaps = 41/382 (10%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+V+T +ILI CK+ DVE + +++EM M P+LV+++++ G + + +
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F D+ G+ D T Y++L+ G+ G L A K+M+EM N + P+ + ++ F
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK A + ML+ +PS A C +ID C EG+VE+A L + + P+
Sbjct: 476 CKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNL 535
Query: 361 AISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAG---------------- 403
+ +I+ LCKE K A +LF +R +PS++ Y+TLI G
Sbjct: 536 FTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYAR 595
Query: 404 -------------------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+C + + EA L+ M E G+ P+ +Y +I GFC+IG+
Sbjct: 596 MLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGD 655
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWN 502
++ + EML +G P +++ L++G Y N ++ ++ + D ++N
Sbjct: 656 MRKAWALFNEMLQRGHLPTVVTYTSLVDG-YCKMNRIDIADMLIDEMKRKGITPDVVTYN 714
Query: 503 FLLT--RIVSDLDSGAGALDEL 522
L+ R +LD L+E+
Sbjct: 715 VLIAAHRRRGNLDKALEMLNEM 736
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 163/313 (52%), Gaps = 3/313 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
NV+ N +I LCKK +++ A++VL+EM S G+ P++ T++ ++ G+ +GD+E +
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTD-AVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ P +Y+ L G K RL+D ++ + ++ G + ++ Y ++I+ FC
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCK-KRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCM 442
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A L+++M++ P + ++ C+ G +A E + +L +P A
Sbjct: 443 QGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIAT 502
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ II C+EG++ EA L +E + +G P+L TYN +I +C+ + A L+ M+
Sbjct: 503 CNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLML 562
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++ V P+V Y+ LI GF K N+++ + + ML G P+ ++++LI L
Sbjct: 563 KRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMC 622
Query: 482 EVGKVVSMATASG 494
E + T +G
Sbjct: 623 EAYNLFKKMTENG 635
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 174/390 (44%), Gaps = 34/390 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLF------------ITVIRNY 124
TY +IH + + L+ E+K + P + +LF + + R+
Sbjct: 362 TYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL 421
Query: 125 GLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-------DLVH-------- 169
G AG + I+ F +Q + S + L+ +V+N LVH
Sbjct: 422 GAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLW 481
Query: 170 ---LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
L F N + ++P++ TCN++I A C++ VE A+ +++EM + G+ PNL T+ +
Sbjct: 482 VNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAV 541
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ E A +F +L R +P Y+ L+DG+ K A+ + M GV
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ V Y ++I C + EA NL M + P VI C G + A
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
L+ +L++ +P ++++ CK +I A L DE +R G P ++TYN LIA
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
L +A + ++M E GV P+ TY ML
Sbjct: 722 RRGNLDKALEMLNEMKENGVLPDHMTYMML 751
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 225/446 (50%), Gaps = 7/446 (1%)
Query: 53 RQQNLDLALQIFHY-AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
R Q++++ +++F + + + F N S + LAR R F+ +E +L L+ N +K
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLR-NENVK 131
Query: 112 CGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
V+ Y +G AV+ + +E ++ V + N+LL+ LV+++R
Sbjct: 132 LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARK 191
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
++ + V N TC IL+K +C + VE ++++ G +PN+V + TI+GGY
Sbjct: 192 VYDEMCDRGDSVDNYSTC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGY 250
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
GDIENA VF ++ +G++P T+ +++G+ K G + +++ E+++ G+ +
Sbjct: 251 CKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSV 310
Query: 291 VTYGVMIEA-FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+I+A + G K A ++ ++ P A +I+ LC+EGK E A
Sbjct: 311 WFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+K +P+N + +I CK + A KL + ERG P ++TY LI G+ S
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ +A + ++++GV P+ YNML+ G CK G + EMLD+ P+ ++
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 469 LLIEGLYESGNEGEVGKVVSMATASG 494
LI+G SG+ E KV S++ G
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKG 515
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 146/293 (49%), Gaps = 1/293 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T NILI LCK+ E A+ LDE G++PN +++ ++ Y + + A ++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +RG PD TY +L+ G + G + DAV + ++ D GV P+ Y +++ CK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A+ L +ML R +P + + +ID G ++A +++ + K D
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I C+ G + EA + E +P TY+T+I G + ++ A +++ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ +PNV TY LI GFC G+ K +EM + PN +++ LI L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 22/386 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
+Y +I +++ +D LL ++ E C ++ I +GL +G + AV
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQM---AERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ V N L++ L + R+ L+F + ++P+ + LI +
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR-NILPDAYVYATLIDGFIR 497
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D + A +V G+ ++V H ++ G+ G ++ A + + VPD T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ ++DGY+K + A+K+ ME N +PN VTY +I FC A +M
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 318 QRKYVPSSALCCKVIDLLCEEGK-VEDACELWKRLLRKNCMPDNAISSTIIHWLCKE--G 374
R VP+ +I L +E +E A W+ ++ C+P+ + ++ K+ G
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677
Query: 375 KIWE--------AKKLFDEF-----ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
K+ LF EF G YN+ + +C + A D MV
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKE 447
+KG P+ ++ ++ GFC +GN+K+
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y A+K F +EK + +V + +L+N + + FK +
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 177 HKFKVVPNVFTCNILIKALCKKDD-VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR-- 233
+ +VPNV T LI++L K+ +E A+ + M + VPN VT +L G+V +
Sbjct: 618 LR-DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 234 --------GDIENAKRVFGDILDR----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
G +F + R GW A Y + G + A D+M
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKM 736
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
G P+ V++ ++ FC S + RN+
Sbjct: 737 VKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 209/435 (48%), Gaps = 38/435 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++++ R DA L+ + P+ + +IR GR A+ +
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASMPVPPDAY----TYTPLIRGLCDRGRVGDALSLLDDM 163
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ Q SV + LL A+ ++ + + R K PN+ T N++I +C++D
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAK-GCTPNIVTYNVIINGMCREDR 222
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A ++L+ + S G P+ V++TT+L G E+ + +F ++++ VP+ T+ +
Sbjct: 223 VDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDM 282
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + + G + A++V+D M ++G N ++I + CK + +A L++M
Sbjct: 283 LVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG 342
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + V+ LC G+ EDA EL ++RKNC P+ +T I LC++G I +A
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402
Query: 381 KLFDEFE--------------------RGSI-------------PSLLTYNTLIAGMCES 407
L ++ +G + P+ +TY TL+ G+C +
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHA 462
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L +M++ NV T+N+L+ FC+ G +E I ++++M++ GC PN +F
Sbjct: 463 ERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITF 522
Query: 468 SLLIEGLYESGNEGE 482
+ L++G+ E N E
Sbjct: 523 NTLLDGITEDCNSEE 537
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 194/416 (46%), Gaps = 11/416 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L +IRN GR A + E V + NTL+ + R D + +
Sbjct: 72 LCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIAS- 130
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+ +T LI+ LC + V A+ +LD+M P++VT+T +L
Sbjct: 131 ---MPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSG 187
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A +V ++ +G P+ TY V+++G + R+ DA ++++ + G +P+ V+Y
Sbjct: 188 FGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTT 247
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C K+ + L +M++ VP+ ++ C G VE A E+ R+
Sbjct: 248 VLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHG 307
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C + + + +I+ +CK+G++ +A + + G P ++Y T++ G+C + +A
Sbjct: 308 CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAK 367
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L ++MV K PN T+N I C+ G + I ++E+M + GC +++ L+ G
Sbjct: 368 ELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGF 427
Query: 475 YESGNEGEVGKVV-SMATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
G ++ S+ ++ ++ LLT + LD+ A L E++ +C
Sbjct: 428 CVQGRVDSALELFNSLPCEPNTI---TYTTLLTGLCHAERLDAAAELLAEMMQNDC 480
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 4/297 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+ C LI+ LC++ A RVL G ++ + T++ GY G ++ A+R+
Sbjct: 68 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL 127
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ PDA TYT L+ G GR+ DA+ ++D+M +P+ VTY V++EA CK
Sbjct: 128 IASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
G+A +LD+M + P+ +I+ +C E +V+DA ++ RL PD
Sbjct: 185 SSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS 244
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ LC + + + LF E E +P+ +T++ L+ C + A + D M
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E G N N++I CK G + L M GC P+ S++ +++GL +G
Sbjct: 305 EHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 207/449 (46%), Gaps = 8/449 (1%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + R+ +D A QI + + F + +Y +++ L A+ ++ VE L E+ +
Sbjct: 213 IINGMCREDRVDDARQILNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
N + E F ++R + G E A++ R+ + + N ++N++ + R D
Sbjct: 271 NNCVP-NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVD 329
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
F N+ + P+ + ++K LC+ E A +L+EM PN VT T
Sbjct: 330 DA-FEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTF 388
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +G I+ A + + + G TY L++G+ GR+ A+++ + +
Sbjct: 389 ICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---C 445
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
EPN +TY ++ C ++ A LL +M+Q + ++ C++G VE+A E
Sbjct: 446 EPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIE 505
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
L ++++ C P+ +T++ + ++ EA +L +G +TY++++ +
Sbjct: 506 LVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLS 565
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ EA +++ + + G+ P YN ++ CK I M+ C PN++
Sbjct: 566 REDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNES 625
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ +LIEGL G E V+S + G
Sbjct: 626 TYVILIEGLAREGLLKEARYVLSELCSRG 654
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 169/340 (49%), Gaps = 7/340 (2%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ L +DD+ A R+++ S G P++ T ++ RG +A RV G
Sbjct: 42 LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
D Y L+ GY + GRL A +++ M V P+ TY +I C + G+A +
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALS 158
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LLDDML+R+ PS +++ +C+ A ++ + K C P+ + II+ +C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218
Query: 372 KEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+E ++ +A+++ + G P ++Y T++ G+C + + L+ +MVE PN
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SM 489
T++ML++ FC+ G + I +L+ M + GC N T +++I + + G + + + +M
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338
Query: 490 ATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
+ S ++ S+ +L + + L+E++ KNC
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNC 378
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 205/421 (48%), Gaps = 56/421 (13%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ NTL+N + + L+ + + PNV T LI ++CK ++ A+ D+
Sbjct: 90 TYNTLVNGYCKEGNFHQA-LVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQ 148
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+ PN T+TTI+ G+ +G ++ A RV ++ G++P TY L++G+ LGR
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR 208
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A+ ++ +M GV P+ V+Y +I F + ++ A + +M+ + +P +
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE----- 385
+I LCE+ ++ +AC++++ +L PD +T+I+ CKEG + +A L DE
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Query: 386 -------------------------------FERGSIPSLLTYNTLI------------- 401
F SIPS +TYNTLI
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388
Query: 402 --AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
G C + EA ++++ M+ K +PN YN++I G C+IGN + ++ +EM+
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGAL 519
P+ + L++ L+ G +GE+ +V+ S + +D+ L++++ +++ G +
Sbjct: 449 FVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKL-TDAE---LSKVLVEINQKEGNM 504
Query: 520 D 520
D
Sbjct: 505 D 505
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 197/376 (52%), Gaps = 3/376 (0%)
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+ ++ F +E+ +V + NT+++ + KR D ++ K + PN+ T N++
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLK-GLEPNLITFNMI 59
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LC+ ++ VL EM G VP+ VT+ T++ GY G+ A + +++ G
Sbjct: 60 INGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TYT L++ K G L A++ D+M G+ PNE TY +I F + EA
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+L++M + ++PS +I+ C G++E+A L + ++ K +PD STII
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239
Query: 372 KEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ ++ A ++ + + +P +TY++LI G+CE LTEA ++ +M+ + P+ F
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY LI +CK G+ + + + +EM+ KG P+ ++++LI GL + E +++
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359
Query: 491 TASGSVESD-SWNFLL 505
S+ S ++N L+
Sbjct: 360 FYDDSIPSAVTYNTLI 375
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 171/324 (52%), Gaps = 4/324 (1%)
Query: 151 SLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ N ++N L ++ R + ++ + SR + VP+ T N L+ CK+ + A+ +
Sbjct: 55 TFNMIINGLCRDGRLKETSEVLVEMSRKGY--VPDEVTYNTLVNGYCKEGNFHQALVLHA 112
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
EM G+ PN+VT+T+++ G++ A F + RG P+ TYT +++G+ + G
Sbjct: 113 EMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQG 172
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
L +A +V++EM +G P+ VTY +I C + EA LL DM+ + +P
Sbjct: 173 LLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYS 232
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+I +++ A ++ ++ K+ +PD S++I LC++ ++ EA +F E
Sbjct: 233 TIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI 292
Query: 390 SI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ P TY TLI C+ +L +A L D+M++KG P+ TYN+LI G K +KE
Sbjct: 293 KLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352
Query: 449 IRILEEMLDKGCFPNKTSFSLLIE 472
R+L ++ P+ +++ LIE
Sbjct: 353 RRLLLKLFYDDSIPSAVTYNTLIE 376
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 206/438 (47%), Gaps = 24/438 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++++ + F L E+ +N P + + ++I + AG A++
Sbjct: 90 TYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT----YTSLINSMCKAGNLNRAMEF 145
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + + R+ T++N Q D + + N + +P++ T N LI C
Sbjct: 146 FDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL-NEMTRSGFIPSIVTYNALINGHC 204
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+E AI +L +M G++P++V+++TI+ G+ +++ A ++ +++ + +PDA
Sbjct: 205 VLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAV 264
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY+ L+ G + RLT+A + EM + P+E TY +I A+CK +A +L D+M
Sbjct: 265 TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEM 324
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH-------- 368
+Q+ ++P + +I+ L ++ + ++A L +L + +P +T+I
Sbjct: 325 IQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFK 384
Query: 369 -------WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
C +G + EA ++F+ + P+ YN +I G C + +A +L+ +M
Sbjct: 385 SAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEM 444
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V P+ T L++ G E ++ ++L + +L+E + GN
Sbjct: 445 VHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNM 504
Query: 481 GEVGKVVSMATASGSVES 498
V +++ G + S
Sbjct: 505 DMVFNLLTEMAKDGLIPS 522
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 172/421 (40%), Gaps = 67/421 (15%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIF---HYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
P + L++ + + NL+ A++ F H G N TY +II+ A+ D
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG-----LCPNERTYTTIINGFAQQGLLD 175
Query: 96 AVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+L E+ ++ P I + +I + + GR E A+ + V V S
Sbjct: 176 EAYRVLNEMTRSGFIPSIVT----YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSY 231
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+T+++ +N+ D M K V+P+ T + LI+ LC++ + A + EM
Sbjct: 232 STIISGFARNQELDRAFQMKVEMIGK-SVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR-- 270
++ + P+ T+TT++ Y GD+ A + +++ +G++PDA TY VL++G K R
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350
Query: 271 ------------------------------------------------LTDAVKVMDEME 282
+ +A +V + M
Sbjct: 351 EARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMI 410
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+ +PNE Y V+I C+ +A L +M+ +VP + ++ L EG
Sbjct: 411 NKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDG 470
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLI 401
+ E+ +LR + D +S ++ KEG + L E + G IPS T I
Sbjct: 471 ELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAI 530
Query: 402 A 402
A
Sbjct: 531 A 531
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 213/444 (47%), Gaps = 36/444 (8%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + TY S++ L + R D+V LL E+ + +K F IR G AG+ A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF---KNSRHKFKVV-------- 182
+ R++ V + L++AL ++ D +F K RHK V
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 183 -----------------------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
P+V T IL+ ALCK + A LD M G++PN
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
L T+ T++ G + +++A +FG++ G P A TY V +D Y K G A++ +
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
+M+ G+ PN V + + K + EA+ + + VP S ++ + G
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYN 398
++++A +L ++ C PD + +++I+ L K ++ EA K+F + + P+++TYN
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TL+AG+ ++ ++ EA L++ MV+KG PN T+N L CK +++L +M+D
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 459 GCFPNKTSFSLLIEGLYESGNEGE 482
GC P+ +++ +I GL ++G E
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKE 661
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 191/397 (48%), Gaps = 11/397 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ +I + D S L N + G+++ + +IR Y +T
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR-YSCKHNNVSGARTLF-- 772
Query: 141 EKFN----VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
EKF VQ + + N L+ L++ ++ +F + +P+V T N L+ A
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST-GCIPDVATYNFLLDAYG 831
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL-DRGWVPDA 255
K ++ + EM + N +TH ++ G V G++++A ++ D++ DR + P A
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L+DG K GRL +A ++ + M D G PN Y ++I F K ++ A L
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++ P ++D LC G+V++ +K L PD + II+ L K +
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 376 IWEAKKLFDEFE--RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ EA LF+E + RG P L TYN+LI + + + EAG++++++ G+EPNVFT+N
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
LI+G+ G + + + M+ G PN ++ L
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 200/416 (48%), Gaps = 16/416 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+ + + LD A ++F G+ P+ TY +++ + + R D+V+ +E+
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRV----TYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+++ P++ F ++ AG A T + + ++ + NTL+ L++
Sbjct: 355 EKDGHVPDVVT----FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
R D +F N V P +T + I K D A+ ++M + G+ PN+V
Sbjct: 411 VHRLDDALELFGN-MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
L G AK++F + D G VPD+ TY ++M Y K+G + +A+K++ EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+NG EP+ + +I K + EA + M + K P+ ++ L + GK+
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTL 400
++A EL++ +++K C P+ +T+ LCK ++ A K LF + G +P + TYNT+
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
I G+ ++ ++ EA + M +K V P+ T L+ G K ++ +I+ L
Sbjct: 650 IFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 167/341 (48%), Gaps = 4/341 (1%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F+ V P + T N+LI L + D +E A V ++ S G +P++ T+ +L Y
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM-DEMEDNGVEPN 289
G I+ ++ ++ + T+ +++ G +K G + DA+ + D M D P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
TYG +I+ K + EA+ L + ML P+ A+ +I+ + G+ + AC L+K
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
R++++ PD S ++ LC G++ E F E E G P ++ YN +I G+ +S
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 409 ELTEAGRLWDDM-VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L EA L+++M +G+ P+++TYN LI G +E +I E+ G PN +F
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 468 SLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLLTR 507
+ LI G SG E +M T S + ++ L R
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 189/404 (46%), Gaps = 5/404 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ E F ++K ++R + T+ +L + R +F V N ++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR-EFGFVLNAYS 190
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI L K A+ V M G P+L T+++++ G R DI++ + ++
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P+ T+T+ + + G++ +A +++ M+D G P+ VTY V+I+A C +K
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A+ + + M ++ P ++D + ++ + W + + +PD + ++
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK G EA D ++G +P+L TYNTLI G+ L +A L+ +M GV+
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P +TY + I + K G++ + E+M KG PN + + + L ++G + E ++
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 487 VSMATASGSV-ESDSWNFLLT--RIVSDLDSGAGALDELLVKNC 527
G V +S ++N ++ V ++D L E++ C
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 38/290 (13%)
Query: 191 LIKALCKKDDVEGAIRVLDEMP-SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+I+ CK ++V GA + ++ +G+ P L T+ ++GG + IE A+ VF +
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G +PD TY L+D Y K G++ + ++ EM + E N +T+ ++I K
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA------ 868
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR-KNCMPDNAISSTIIH 368
G V+DA +L+ L+ ++ P +I
Sbjct: 869 -----------------------------GNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G+++EAK+LF+ + G P+ YN LI G ++ E A L+ MV++GV P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ TY++L+ C +G EG+ +E+ + G P+ ++L+I GL +S
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 206/472 (43%), Gaps = 82/472 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ ++ ++ D LL+E+ +N P++ +L T+ + A R + A K
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK----ADRVDEAWKM 560
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F+R+++ ++ +V + NTLL L +N + +F+ K PN T N L LC
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLC 619
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHT-------------------------------- 224
K D+V A+++L +M MG VP++ T+
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT 679
Query: 225 --TILGGYVWRGDIENAKRVF--------------------GDILDRGWVPDATTYT--- 259
T+L G V IE+A ++ G IL + +A +++
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 260 ----VLMDG----------YIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGK 304
+ DG K ++ A + ++ +D GV+P TY ++I +
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
A+++ + +P A ++D + GK+++ EL+K + C + +
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 365 TIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+I L K G + +A L+ + +R P+ TY LI G+ +S L EA +L++ M++
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G PN YN+LI GF K G A + + M+ +G P+ ++S+L++ L
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 1/304 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
FK+ +V TCN +++AL +E V D M + + T+ TI
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G ++ A + + G+V +A +Y L+ +K T+A++V M G P+
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++ K + LL +M P+ I +L GK+ +A E+ KR+
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAEL 410
+ C PD + +I LC K+ AK++F++ + G P +TY TL+ ++ +L
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ W +M + G P+V T+ +L+ CK GN E L+ M D+G PN +++ L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 471 IEGL 474
I GL
Sbjct: 405 ICGL 408
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 181/347 (52%), Gaps = 5/347 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +L++LV+NKRY V +FK + P++ T +ILI C + + A V +
Sbjct: 61 FNNILSSLVKNKRYPTVISLFKQFEPN-GITPDLCTLSILINCFCHQAHITLAFSVFANI 119
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G P+ +T T++ G +RG+I+ ++ +G+ D +Y L++G K G
Sbjct: 120 LKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGET 179
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+++ ++E + V+P+ V Y +I + CK K G+A ++ +M+ + P +
Sbjct: 180 KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTL 239
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK---IWEAKKLFDEFE- 387
I C GK+++A L + KN PD S +I L KEGK + EA LF+E +
Sbjct: 240 IHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKH 299
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+ IP ++TYN+LI G+C++ L A L +M E G++P+V++Y +L+ G CK G +
Sbjct: 300 KNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEI 359
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ +L KGC N ++++I GL ++G GE + S G
Sbjct: 360 AKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKG 406
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 108/206 (52%), Gaps = 4/206 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ---NKRYDLVHLMFK 173
+ T+I + + G+ + A ++ N+ V + + L++AL + K D +F+
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+HK ++P++ T N LI LCK +E AI +L EM G+ P++ ++T +L G
Sbjct: 296 EMKHK-NMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKG 354
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G +E AK F +L +G + Y V+++G K G +A+ + +ME G PN +T+
Sbjct: 355 GRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITF 414
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQR 319
+I A + ++ +A +L +M+ R
Sbjct: 415 RTIICALSEKDENDKAEKILREMIAR 440
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 136/282 (48%), Gaps = 13/282 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y ++I+ L +A AV LL +L+ + P++ + ++ +N L ++ +
Sbjct: 165 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224
Query: 137 FLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ + V + TL++ + K + L+ N + P+V+T ++LI AL
Sbjct: 225 IVK----GISPDVVTYTTLIHGFCIMGKMKEAFSLL--NEMKLKNINPDVYTFSVLIDAL 278
Query: 196 CK---KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K K V+ A+ + +EM M+P++VT+ +++ G +E A + ++ + G
Sbjct: 279 GKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD +YT+L+DG K GRL A + + G N Y VMI CK GEA +L
Sbjct: 339 PDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDL 398
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
M + +P++ +I L E+ + + A ++ + ++ +
Sbjct: 399 KSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIAR 440
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 243/549 (44%), Gaps = 78/549 (14%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH-YAGKFHPNFSHNYDTYHSIIHKLARA 91
P P + L+ + ++ ++ AL++ H A N + N TY++II L +A
Sbjct: 153 PEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKA 212
Query: 92 RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
+A D E +L + + +K + T+I A + A + V+ V +
Sbjct: 213 QAVDRAEGVLQHMI-DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA------- 204
NT+++ L + + D + ++ K V P+V T N +I LCK V+ A
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDK-GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330
Query: 205 ----------------------------IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+R L+EM + G+ P++VT++ +L G
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+++F ++ +G P+ T Y +L+ GY G + D ++D M NG+ PN + ++
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ A+ K EA ++ M Q P +ID LC+ G+V+DA + +++
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510
Query: 357 MPDNAISSTIIH-------W----------------------------LCKEGKIWEAKK 381
P++ + +++++ W LC EG++ A++
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L D ER G P++++YNTLI G C + EA +L D MV G++P++ +Y+ L++G+C
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K G + EML KG P ++S +++GL+ + E ++ SG
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ----Q 686
Query: 501 WNFLLTRIV 509
W+ I+
Sbjct: 687 WDIYTYNII 695
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 196/401 (48%), Gaps = 9/401 (2%)
Query: 80 TYHSIIHKLARARAFDAVE---SLLTELKQNPEIKCGENLFITVIRN--YGLAGRPELAV 134
++ +++ +ARAR E SL + + K +L I + GR E
Sbjct: 51 AFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGF 110
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F I K + + +N LLN L KR D + +F +PNV +CN L+K
Sbjct: 111 AAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKG 170
Query: 195 LCKKDDVEGAIRVLDEMPSMG---MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
LC + VE A+ +L M G PN+VT+ TI+ G ++ A+ V ++D+G
Sbjct: 171 LCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 230
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
D TY+ ++DG K + A V+ M D GV+P+ VTY +I+ CK + A
Sbjct: 231 KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+L M+ + P +ID LC+ V+ A + + ++ K+ PD + +IH
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350
Query: 372 KEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
G+ E + +E + RG P ++TY+ L+ +C++ + TEA +++ M+ KG++PNV
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
Y +L+ G+ G + +L+ M+ G PN F++++
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVL 451
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 170/358 (47%), Gaps = 8/358 (2%)
Query: 127 AGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKV 181
A R + A+ LR + +F +V S NTLL L KR + L+H M ++
Sbjct: 138 AKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGN--C 195
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PNV T N +I LCK V+ A VL M G+ ++VT++TI+ G ++ A+
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEG 255
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
V ++D+G PD TY ++DG K + A V+ M D GV+P+ VTY +I+ C
Sbjct: 256 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 315
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + A +L M+ + P +I G+ ++ + + + PD
Sbjct: 316 KAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVV 375
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S ++ +LCK GK EA+K+F R I P++ Y L+ G + + L D M
Sbjct: 376 TYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
V G+ PN + +N+++ + K E + I M G P+ ++ +LI+ L + G
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLG 493
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 214/480 (44%), Gaps = 44/480 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++II L +A+A D + +L + + ++K + +I Y G + V+
Sbjct: 306 TYNTIIDGLCKAQAVDRADGVLQHMI-DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEE 364
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V + + LL+ L +N + +F K + PNV IL+ +
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRK-GIKPNVTIYGILLHGYAARG 423
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ +LD M + G+ PN +L Y + I+ A +F + G PD TY
Sbjct: 424 AIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYG 483
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+D KLGR+ DAV ++M ++GV PN V + ++ C + +A L +M +
Sbjct: 484 ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ 543
Query: 320 KYVPSSALCCKVIDLLCEEGKV-----------------------------------EDA 344
P+ ++ LC EG+V ++A
Sbjct: 544 GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEA 603
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
+L ++ PD T++ CK G+I A LF E R G P +TY+T++ G
Sbjct: 604 AQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQG 663
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + +EA L+ +M++ G + +++TYN+++ G CK E +I + + K PN
Sbjct: 664 LFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPN 723
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSDLDSGAGALDEL 522
+F+++I+ L++ G + + + + + G V + ++ ++ I+ + G LDE
Sbjct: 724 IITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQE-----GLLDEF 778
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 177/370 (47%), Gaps = 22/370 (5%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL----VHLMFKNSRH-KFKVVPNVFT 187
A+K F + SVR+ N LLN + + + V L + +R KV P++ T
Sbjct: 33 ALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCT 92
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV--FGD 245
+IL C+ +E + G N V +L G +AKRV D
Sbjct: 93 YSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLC------DAKRVDEAMD 146
Query: 246 ILDR-----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG---VEPNEVTYGVMI 297
IL R G +P+ + L+ G R+ +A++++ M ++G PN VTY +I
Sbjct: 147 ILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTII 206
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ CK + A +L M+ + +ID LC+ V+ A + + ++ K
Sbjct: 207 DGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK 266
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD +TII LCK + A+ + ++G P ++TYNT+I G+C++ + A +
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
M++K V+P++ TYN LI G+ G KE +R LEEM +G P+ ++SLL++ L +
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386
Query: 477 SGNEGEVGKV 486
+G E K+
Sbjct: 387 NGKCTEARKI 396
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 9/314 (2%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
N++ +A C E A+ + + M S + P+L T++ + G + G IE+ FG
Sbjct: 57 NVVARARCSSTS-ELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGL 115
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM-DEMEDNGVEPNEVTYGVMIEAFCKGK 304
IL GW + L++G R+ +A+ ++ M + G PN V+ +++ C K
Sbjct: 116 ILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEK 175
Query: 305 KSGEARNLLDDMLQR---KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ EA LL M + P+ +ID LC+ V+ A + + ++ K D
Sbjct: 176 RVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVV 235
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
STII LCK + A+ + ++G P ++TYNT+I G+C++ + A + M
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM 295
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
++KGV+P+V TYN +I G CK +L+ M+DK P+ +++ LI G +G
Sbjct: 296 IDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW 355
Query: 481 GEVGKVVSMATASG 494
EV + + A G
Sbjct: 356 KEVVRRLEEMYARG 369
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 191/432 (44%), Gaps = 4/432 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++H A A + LL + N I +F V+ Y + A+
Sbjct: 408 NVTIYGILLHGYAARGAIADLTDLLDLMVANG-ISPNNYIFNIVLCAYAKKAMIDEAMHI 466
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F R+ + + V + L++AL + R D L F N V PN N L+ LC
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF-NQMINDGVTPNSVVFNSLVYGLC 525
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
D E A + EM G+ PN+V TI+ G + A+R+ + G P+
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVI 585
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y L+ G+ GR +A +++D M G++P+ ++Y ++ +CK + A L +M
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM 645
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L++ P + ++ L + +A EL+ +++ D + I++ LCK +
Sbjct: 646 LRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCV 705
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA K+F + P+++T+ +I + + +A L+ + G+ PNV TY ++
Sbjct: 706 DEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIM 765
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASG 494
++ + G E + M GC P+ + +I L G G +S + +
Sbjct: 766 MKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNF 825
Query: 495 SVESDSWNFLLT 506
S+E+ + + L++
Sbjct: 826 SLEASTTSLLIS 837
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 179/395 (45%), Gaps = 15/395 (3%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIK 111
++ +D A+ IF + S + TY +I L + R DAV LK N I
Sbjct: 456 KKAMIDEAMHIFSRMSQH--GLSPDVVTYGILIDALCKLGRVDDAV------LKFNQMIN 507
Query: 112 CGEN----LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
G +F +++ R E A + F + V+ +V NT++ L N+ +
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC-NEGQVM 566
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
V +S + V PNV + N LI C + A ++LD M S+G+ P+L+++ T+L
Sbjct: 567 VAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLL 626
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
GY G I+NA +F ++L +G P A TY+ ++ G R ++A ++ M +G +
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
+ TY +++ CK EA + + + P+ +ID+L + G+ +DA +L
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCE 406
+ + +P+ ++ + +EG + E LF E+ G P + N +I +
Sbjct: 747 FASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLG 806
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E+ AG + E T ++LI F +
Sbjct: 807 RGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 1/268 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I + LAGR + A + + ++ + S +TLL + R D + +F+ K
Sbjct: 589 TLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRK 648
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P T + +++ L A + M G ++ T+ IL G ++
Sbjct: 649 -GVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDE 707
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++F + + P+ T+T+++D K GR DA+ + + +G+ PN VTY +M++
Sbjct: 708 AFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMK 767
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ E NL M + P S + +I L G++ A ++ N
Sbjct: 768 NIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSL 827
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ + +S +I +E AK L +++
Sbjct: 828 EASTTSLLISLFSREEYKNHAKSLPEKY 855
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 101/233 (43%), Gaps = 2/233 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y +++ + D L E+ + + G + T+++ R A + +L
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKG-VTPGAVTYSTILQGLFHTRRFSEAKELYLN 679
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K Q + + N +LN L + D +F++ K + PN+ T I+I L K
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK-DLRPNIITFTIMIDVLFKGG 738
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A+ + +PS G+VPN+VT+ ++ + G ++ +F + G PD+
Sbjct: 739 RKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLN 798
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
++ + G + A + ++++ T ++I F + + A++L
Sbjct: 799 AIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 224/461 (48%), Gaps = 9/461 (1%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYA-GKFHPNFSHNYDTYHSIIHKL 88
++ P + + + L P + ++ R +L + + K H SH+Y TY ++ L
Sbjct: 24 SLDPFVGYFSKHLTPSLVYEVVNRLHIPNLGFKFVEFCRHKLH--MSHSYLTYSLLLRSL 81
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
R+ + + ++ + +I L ++ +Y + GR +++ + ++ NV +
Sbjct: 82 CRSNLHHTAKVVYDWMRCDGQIP-DNRLLGFLVWSYAIVGRLDVSRELLADVQCNNVGVN 140
Query: 149 VRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
N L N L+ QNK D V L + R ++K P +T NIL++ LC+ +++ A R+
Sbjct: 141 AVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYK--PVTYTVNILMRGLCRAGEIDEAFRL 198
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATTYTVLMDGYI 266
L+++ S G +P+++T+ T++ G +++ A+ + ++ G + PD +YT ++ GY
Sbjct: 199 LNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYC 258
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K ++ + + EM +G PN T+ +I F K A L + ML + VP A
Sbjct: 259 KFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVA 318
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I+ G+V A ++W ++ KN S ++ LC ++ +A+ +
Sbjct: 319 TFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLL 378
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E +P YN +I G C+S + EA ++ +M +P+ T+ +LI G C G
Sbjct: 379 NESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRM 438
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
E I I +ML GC P++ + + L L ++G GE +V
Sbjct: 439 PEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARV 479
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 160/353 (45%), Gaps = 43/353 (12%)
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP----------------- 218
RHK + + T ++L+++LC+ + A V D M G +P
Sbjct: 62 RHKLHMSHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGR 121
Query: 219 ------------------NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
N V + + + + + +A +F +++ + P T +
Sbjct: 122 LDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNI 181
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-LQR 319
LM G + G + +A ++++++ G P+ +TY +I C+ + AR+LL ++ L
Sbjct: 182 LMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNG 241
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
++ P +I C+ K+E+ L+ ++R P+ + +I K G + A
Sbjct: 242 EFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASA 301
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L+++ +G +P + T+ +LI G ++ +A +W M +K + ++T+++L+ G
Sbjct: 302 LALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSG 361
Query: 439 FC---KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
C ++ A++ +R+L E P ++ +I+G +SGN E K+V+
Sbjct: 362 LCNNNRLHKARDILRLLNE---SDIVPQPFIYNPVIDGYCKSGNVDEANKIVA 411
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 121/311 (38%), Gaps = 72/311 (23%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++IH L R D SLL E+ N E + T+I Y F +
Sbjct: 213 TYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYC----------KFSK 262
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ N+ L ++++ PN FT N LI K
Sbjct: 263 MEEGNL---------LFGEMIRSG-----------------TAPNTFTFNALIGGFGKLG 296
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-------- 251
D+ A+ + ++M G VP++ T T+++ GY G + A ++ + D+
Sbjct: 297 DMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFS 356
Query: 252 ---------------------------VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
VP Y ++DGY K G + +A K++ EME N
Sbjct: 357 VLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVN 416
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+P+++T+ ++I C + EA + ML P + L + G +A
Sbjct: 417 RCKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEA 476
Query: 345 CELWKRLLRKN 355
+ K++L +N
Sbjct: 477 ARV-KKVLAQN 486
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 187/333 (56%), Gaps = 4/333 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ + LL+A+ + K+YD+V +++ + + N+ TCNIL+ C+ + A+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQM-LGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGD-IENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
L +M +G P++VT ++L G+ RGD + +A +F ++ G+ P+ Y ++DG
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFC-RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K ++ +A+ +++ ME +G+ P+ VTY +I C + +A ++ M +R+ P
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-E 385
+ID +EG+V +A E ++ ++R++ PD S +I+ LC ++ EA+++F
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+G P ++TY+ LI G C+S ++ +L+ +M ++GV N TY +LIQG+C+ G
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I M+ G PN ++++L+ GL ++G
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 222/453 (49%), Gaps = 11/453 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEI 110
R LD +L +F + + P S + ++ +++ + +D V L +++ P
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPS--IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVH 169
C N+ + + + LA+ ++ K + S+ + +LLN + R YD ++
Sbjct: 116 LCTCNILLNC---FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+ + +K PNV N +I LCK V+ A+ +L+ M G+ P++VT+ +++ G
Sbjct: 173 MFDQMVGMGYK--PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +A R+ + R PD T+ L+D +K GR+++A + +EM ++P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VTY ++I C + EA + M+ + P +I+ C+ KVE +L+
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESA 408
+ ++ + + + +I C+ GK+ A+++F G P+++TYN L+ G+C++
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
++ +A + DM + G++ ++ TYN++I+G CK G + I + +G P+ +++
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
++ GLY+ G E + G + ++ +
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGILPNECY 503
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 203/433 (46%), Gaps = 11/433 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P RL+S I + + D+ + ++ HN T + +++ R
Sbjct: 76 RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML--GIPHNLCTCNILLNCFCRCSQLS 133
Query: 96 AVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
S L +L P I F +++ + R A+ F ++ + +V
Sbjct: 134 LALSFLGKMIKLGHEPSIV----TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY 189
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT+++ L ++K+ D L N K + P+V T N LI LC A R++ M
Sbjct: 190 NTIIDGLCKSKQVDNA-LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ P++ T ++ V G + A+ + +++ R PD TY++L+ G RL
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A ++ M G P+ VTY ++I +CK KK L +M QR V ++ +I
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP 392
C GK+ A E+++R++ P+ + ++H LC GKI +A + + ++ +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 393 S-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ ++TYN +I GMC++ E+ +A ++ + +G+ P+++TY ++ G K G +E +
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 452 LEEMLDKGCFPNK 464
+M + G PN+
Sbjct: 489 FRKMKEDGILPNE 501
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 3/243 (1%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ G R + + Y ++ I+ +L D++ + M P+ + ++ A
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDN 360
K KK L + M Q +P + C ++ + C ++ A ++++ P
Sbjct: 93 KMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSI 151
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++++ C+ ++++A +FD+ G P+++ YNT+I G+C+S ++ A L +
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G+ P+V TYN LI G C G + R++ M + +P+ +F+ LI+ + G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 480 EGE 482
E
Sbjct: 272 VSE 274
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N Y M+ + K ++ +L M+Q + +PS A +++ + + K + LW
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 349 KRLLRKNCMPDNAISSTII-HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCE 406
+++ +P N + I+ + C+ ++ A + + G PS++T+ +L+ G C
Sbjct: 105 EQMQMLG-IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A ++D MV G +PNV YN +I G CK + +L M G P+ +
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 467 FSLLIEGLYESGNEGEVGKVVSMAT 491
++ LI GL SG + ++VS T
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMT 248
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 177/347 (51%), Gaps = 3/347 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ N LLN+L+ + R +F++ P+V++ N++IK +C+ + + A+ +++
Sbjct: 181 AYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVER 240
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATTYTVLMDGYIKLG 269
M G P+ +TH ++ G + V + G +P+A TYT ++ GY K G
Sbjct: 241 MTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAG 300
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
++ DA+ V ++M ++G PN VTY V+I + K A + ++ R P
Sbjct: 301 KMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFS 360
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-R 388
+ID C G+++DA +WK + + P+ S IIH LCK+ + EA + E R
Sbjct: 361 SLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMR 420
Query: 389 GSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
I P YN +I +C+ ++ EA + DM EKG P+ +TY +LI G C G E
Sbjct: 421 TDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPE 480
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
I + +M++ GC P+ + + + + ++G EV +++ +A+ G
Sbjct: 481 AITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHG 527
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 173/334 (51%), Gaps = 9/334 (2%)
Query: 88 LARARAFDAV---ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
+A RA DAV ES + + +P++ F VI+ G + A++ R+ +F
Sbjct: 190 IAHGRAQDAVALFESWIQDGLYSPDVWS----FNVVIKGVCRMGNFQKALELVERMTEFG 245
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ N L++ L + K+ + H + + + +PN T +I CK +E A
Sbjct: 246 CSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDA 305
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ V ++M G PN VT+ ++ GY D+E+A R++ ++ R PD T++ L+DG
Sbjct: 306 MSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDG 365
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-P 323
Y + G+L DA ++ EM + ++PN T+ ++I + CK +S EA ++L ++ R + P
Sbjct: 366 YCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAP 425
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ + VID+LC+ GKV++A + + K C PD + +I C +G+I EA LF
Sbjct: 426 QTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLF 485
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
+ E G P +T N+ ++ + ++ E ++
Sbjct: 486 HKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQI 519
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 142/289 (49%), Gaps = 6/289 (2%)
Query: 204 AIRVLDEM--PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTV 260
A+R+ + P + + P+ ++ ++ G +A ++F ++D+ G++P+A ++
Sbjct: 90 ALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSF 149
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+ G L A ++ + G Y ++ + ++ +A L + +Q
Sbjct: 150 VAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDG 209
Query: 321 -YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
Y P VI +C G + A EL +R+ C PD + ++ LC+ ++ +
Sbjct: 210 LYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKG 269
Query: 380 KKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
++ +R + P+ +TY ++I+G C++ ++ +A +++DM+E G PN TYN+LI
Sbjct: 270 HEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLIN 329
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
G+ K + + +R+ +++ + C P+ +FS LI+G G + ++
Sbjct: 330 GYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRI 378
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 148/338 (43%), Gaps = 39/338 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
++ + R N AL++ +F S + T++ ++ L RA+ + +L L++
Sbjct: 221 VIKGVCRMGNFQKALELVERMTEF--GCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQR 278
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + +VI Y AG+ E A+ + N +L + +
Sbjct: 279 DGVCMPNAVTYTSVISGYCKAGKMEDAMSVY---------------NDMLESGTR----- 318
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
PN T N+LI K D+E A+R+ ++ P++VT +++
Sbjct: 319 ----------------PNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSL 362
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME-DNG 285
+ GY G +++AKR++ ++ P+ T+++++ K R +A+ ++ E+
Sbjct: 363 IDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTD 422
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P Y +I+ CKG K EA ++ DM ++ P +I C +G++ +A
Sbjct: 423 IAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAI 482
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
L+ +++ C PDN ++ + + K G E ++
Sbjct: 483 TLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIM 520
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 7/249 (2%)
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDA 344
V P+E +Y +I C+ + +A L D M+ Q Y+P + V G ++ A
Sbjct: 104 VPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAA 163
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIA 402
L + R C + + +++ L G+ +A LF+ + + + P + ++N +I
Sbjct: 164 STLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIK 223
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CF 461
G+C +A L + M E G P+ T+N+L+ G C+ +G +L + G C
Sbjct: 224 GVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCM 283
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGA 518
PN +++ +I G ++G + V + SG+ + ++N L+ D++S
Sbjct: 284 PNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRM 343
Query: 519 LDELLVKNC 527
+L++++C
Sbjct: 344 YRQLILRHC 352
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 82/176 (46%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++I Y G+ + A + + + ++Q +V + + ++++L + R + +
Sbjct: 359 FSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELN 418
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ + P F N +I LCK V+ A ++ +M G P+ T+T ++ G+ +G I
Sbjct: 419 MRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRI 478
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
A +F +++ G PD T + +K G + ++M +G+ +V+
Sbjct: 479 PEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGLASQKVS 534
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 2/380 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++I Y + A FL + R+ S L++ + +R D +F +
Sbjct: 242 YTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLF-SQM 300
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H+ P V T ++I ALC+ A+ + EM PN+ T+T ++ +
Sbjct: 301 HEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNF 360
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++AK++ +L++G +P TY L+DGY K G A++++ ME N PN TY +
Sbjct: 361 DDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNEL 420
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FC+GK +A +LL ML+RK P+ +I C+EG + A +L +
Sbjct: 421 ILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGL 480
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD S I LCK G + EA+ LF+ E+G + + Y+TLI G C+ ++++
Sbjct: 481 VPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRF 540
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L D M+ G PN TYN LI G+CK N KE +++ M+ + P ++++LI+ L
Sbjct: 541 LLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLL 600
Query: 476 ESGNEGEVGKVVSMATASGS 495
+ + + ++GS
Sbjct: 601 KDDEFDQAHDMFDQMLSTGS 620
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 200/418 (47%), Gaps = 7/418 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTF 137
TY S+I R + DA ++ + P C N + +I + A R + A+K F
Sbjct: 241 TYTSLILGYCRNKNVDAANAIFLSM---PNKGCLRNEVSYTNLIHGFCEARRVDEALKLF 297
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + N +VR+ ++ AL Q R MFK K PNV T +LI +LC+
Sbjct: 298 SQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK-HCQPNVHTYTVLICSLCE 356
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A ++L+ M G++P++VT+ ++ GY +G +A + + P+A T
Sbjct: 357 DSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNART 416
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L+ G+ + + A+ ++ +M + ++PN VTY ++I CK G A LL M
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMN 476
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ VP ID LC+ G VE+A L++ L K + I ST+I CK GK+
Sbjct: 477 ESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVS 536
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+ + L D+ G +P+ +TYN+LI G C+ EA L D M+++ +EP TY +LI
Sbjct: 537 DGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILI 596
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
K + + ++ML G P+ ++ I G + ++ A G
Sbjct: 597 DNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 209/444 (47%), Gaps = 16/444 (3%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFS--HNYDTYHSIIHKLARARAFDAVESLLTELKQN--- 107
R +N+D A IF PN N +Y ++IH AR D L +++ ++
Sbjct: 251 RNKNVDAANAIFLSM----PNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCW 306
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
P ++ + +I GR A+ F + + + Q +V + L+ +L ++ +D
Sbjct: 307 PTVR----TYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDD 362
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ K ++P+V T N LI CKK A+ +L M S PN T+ ++
Sbjct: 363 AKKILNGMLEK-GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ +I A + +L+R P+ TY +L+ G K G L A K++ M ++G+
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+E TY V I+ CK EAR+L + + ++ + + +ID C+ GKV D L
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFL 541
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCE 406
++L C+P++ +++I CKE EA+ L D + I P+ TY LI + +
Sbjct: 542 LDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLK 601
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
E +A ++D M+ G P+VF Y I +C G K+ ++ +M KG P+
Sbjct: 602 DDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTML 661
Query: 467 FSLLIEGLYESGN-EGEVGKVVSM 489
++L I+ G+ +G G + M
Sbjct: 662 YTLFIDAYGRFGSIDGAFGILKRM 685
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/605 (23%), Positives = 252/605 (41%), Gaps = 105/605 (17%)
Query: 6 HQKITAPSCLLQSIGGAR---CSLSTITVTPPIKPWPQ------RLYPKRLVSMIFRQQN 56
H+ T+P+ L QS L +I P + P + P + ++ +
Sbjct: 30 HRFFTSPASLPQSFSVEHDIPAQLFSILSRPNWQKHPSLKNLIPSIAPSHISALFALNLD 89
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
AL F++ G+ H F HN ++ S+L L N ++ EN+
Sbjct: 90 PQTALAFFNWIGQKH-GFKHNVQSH----------------VSMLNILVPNGYLRIAENM 132
Query: 117 FITVIRNYGLAGRPELAVKTFL----RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
I +I++ + ++ R++ F + ++R N LL L + D + ++
Sbjct: 133 RILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVY 192
Query: 173 KNSRHKFKVVPNVFTCNILIKALCK----------------------------------- 197
V PN+FT N ++ CK
Sbjct: 193 LEMLDDM-VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCR 251
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+V+ A + MP+ G + N V++T ++ G+ ++ A ++F + + P T
Sbjct: 252 NKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRT 311
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YTV++ +LGR T+A+ + EM + +PN TY V+I + C+ +A+ +L+ ML
Sbjct: 312 YTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGML 371
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD------------------ 359
++ +PS +ID C++G A E+ + NC P+
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIH 431
Query: 360 ----------------NAISSTI-IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
N ++ I IH CKEG + A KL E G +P TY+ I
Sbjct: 432 KAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFI 491
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+C+ + EA L++ + EKG++ N Y+ LI G+CK+G +G +L++ML GC
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV 551
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLLTRIVSD--LDSGAGA 518
PN +++ LI+G + N E +V M +D++ L+ ++ D D
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611
Query: 519 LDELL 523
D++L
Sbjct: 612 FDQML 616
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 199/439 (45%), Gaps = 46/439 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I L FD + +L + + I + +I Y G A++
Sbjct: 343 NVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIP-SVVTYNALIDGYCKKGLSASALEI 401
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+E N + R+ N L+ + +K L+H M + K+ PNV T NILI
Sbjct: 402 LSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLER-----KLQPNVVTYNILI 456
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK+ D+ A ++L M G+VP+ T++ + RG +E A+ +F + ++G
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
+ Y+ L+DGY K+G+++D ++D+M G PN +TY +I+ +CK K EAR L
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+D M++R P++ +ID L ++ + + A +++ ++L PD I + IH C
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ +A+ L + +G +P + Y I + A + M E G EP+ +T
Sbjct: 637 HGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYT 696
Query: 432 YNMLIQGFCKIGNAKE--------------------------------GIRILEEMLDKG 459
Y+ LI+ + NAK + + +M + G
Sbjct: 697 YSCLIK---HLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHG 753
Query: 460 CFPNKTSFSLLIEGLYESG 478
C PN ++ I GL + G
Sbjct: 754 CAPNANTYGKFITGLCKVG 772
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 186/434 (42%), Gaps = 22/434 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I L + + SL LK+ IK E ++ T+I Y G+ +
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKG-IKANEVIYSTLIDGYCKVGKVSDGRFLLDK 544
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + + N+L++ + K + LV +M K + P T ILI L
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD-----IEPAADTYTILIDNL 599
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
K D+ + A + D+M S G P++ +T + Y G +++A+ + + +G +PD
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDT 659
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
YT+ +D Y + G + A ++ M + G EP+ TY +I+ K E + +
Sbjct: 660 MLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPK-EVSSSSEL 718
Query: 316 MLQRKYVPSSAL--CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
V S+ C + +D E +L+ ++ C P+ I LCK
Sbjct: 719 SDLSSGVASNDFSNCWRRVD-------YEFTLDLFGKMAEHGCAPNANTYGKFITGLCKV 771
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + A +LFD E+G P+ YN+L+ C+ EA R D M+E P++ +
Sbjct: 772 GCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSC 831
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MAT 491
+L+ G GN ++ R+ L ++ + +LI+GL + G + + M T
Sbjct: 832 KLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMET 891
Query: 492 ASGSVESDSWNFLL 505
+ +++ L+
Sbjct: 892 QGCQIHPKTYSMLI 905
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 142/358 (39%), Gaps = 32/358 (8%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+S+I + + F LL ++ +I+ + + +I N + A
Sbjct: 553 NSITYNSLIDGYCKEKNFKEAR-LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ V ++A + R ++ K ++P+ + I A
Sbjct: 612 FDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAK-GIMPDTMLYTLFIDAYG 670
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG---------------------------- 228
+ ++GA +L M +G P+ T++ ++
Sbjct: 671 RFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDF 730
Query: 229 GYVWRG-DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
WR D E +FG + + G P+A TY + G K+G L A ++ D M++ G
Sbjct: 731 SNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQS 790
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
PNE Y ++ C+ GEA LD M++ +++P C ++ L +EG E A +
Sbjct: 791 PNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRV 850
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGM 404
+ L+ D + +I L K+G + LF E +G TY+ LI G
Sbjct: 851 FCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 208/442 (47%), Gaps = 42/442 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I + A + E A + R++ V + N ++ + + DL +F+ K
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFE-ELLKD 202
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
P V T ILI+A ++ A+++LDEM S G+ P+ +T+ I+ G ++ A
Sbjct: 203 NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKA 262
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ + RG PD TY +L+ + G+ ++ K++ EM G +PN VT+ ++I
Sbjct: 263 FELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGT 322
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K EA NLL M ++ P + +I C EG+++ A E + ++ C+PD
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-------------------------------- 387
+TI+ LC+ GK +A ++F++ +
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMIL 442
Query: 388 ----RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+G P +TYN+LI+ +C + EA L DM PNV +YN+++ G CK+
Sbjct: 443 KLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWN- 502
A + I +L M +KGC PN+T++ LLIEG+ SG E ++ + ++ DS+N
Sbjct: 503 RANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDSFNR 562
Query: 503 ----FLLTRIVSDLDSGAGALD 520
F L + DL G+ D
Sbjct: 563 LNKTFPLLDVYKDLTFSDGSKD 584
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 154/298 (51%), Gaps = 1/298 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+VF N LI K + +E A RVLD M S G +P++VT+ ++G + RG ++ A +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L P TYT+L++ I G + A+K++DEM G+EP+ +TY +I CK
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+A LL + R P ++ L GK + +L ++ C P+
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC++GK+ EA L E+G P Y+ LIAG C L A + M+
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G P++ YN ++ G C+ G A + + + E++ + GC PN +S++ L L+ SG+
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 2/234 (0%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++D+G+ PD T L+ G+ + A +VM+ +E G +P+ Y +I F K +
Sbjct: 95 MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQ 153
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A +LD M R ++P +I C GK++ A E+++ LL+ NC P +
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213
Query: 366 IIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I +G I A KL DE +G P LTYN +I GMC+ + +A L + +G
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+P++ TYN+L++ G EG +++ EM+ GC PN + S+LI L G
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDG 327
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 146/324 (45%), Gaps = 8/324 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II + + D LL L P+I N+ + + + G E +
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDI-ITYNILLRTLLSRGKWSEGEKLISE 303
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ I + +V + + L+ L ++ + + + ++ + K + P+ + + LI C
Sbjct: 304 MISI---GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK-GLKPDAYCYDPLIAGFC 359
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ ++ A L+ M S G +P++V + TI+ G G + A VF + + G P+ +
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y L G A++++ ++ + G++P+E+TY +I C+ EA LL DM
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+Y P+ ++ LC+ + DA E+ + K C P+ +I + G
Sbjct: 480 QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLR 539
Query: 377 WEAKKLFDEFERGSIPSLLTYNTL 400
EA +L + + S ++N L
Sbjct: 540 AEAMELANSLHGMNAISEDSFNRL 563
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 35/240 (14%)
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK----------------VID 333
EV ++ C+ K E+ L+ M+ + Y P LC K V++
Sbjct: 69 EVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME 128
Query: 334 LLCEEGK------------------VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+L GK +E+A + R+ + +PD + +I C GK
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A ++F+E + + P+++TY LI + A +L D+M+ KG+EP+ TYN
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA 248
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+I+G CK + +L + +GC P+ ++++L+ L G E K++S + G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
K+++ C GK ++ + ++ K PD + + +I I +A ++ + ER
Sbjct: 74 KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERY 133
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + YN LI+G ++ +L A R+ D M +G P+V TYN++I FC G +
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
I EE+L C P ++++LIE G K++ + G +E D+ +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG-LEPDTLTY 246
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ C+ G E + LE M+DKG P+ + LI+G + S N G+ +V+ + G
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 495 SVESDSWNFLLTRIV--SDLDSGAGALDEL 522
+ ++N L++ + + L++ LD +
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRM 164
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 190/369 (51%), Gaps = 5/369 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G A+K +I+ + +V +T+++AL + + + +F K
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 228
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ +V T + LI C + ++ AI +L+EM + PN+ T+ ++ G ++
Sbjct: 229 -GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK V +L PD TY+ LMDGY + + A V + M GV P+ TY ++I
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK K EA NL +M Q+ VP +ID LC+ G++ +L + + P
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG-QP 406
Query: 359 DNAIS-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
N I+ S++I LCK G + A LF++ ++G P+ T+ L+ G+C+ L +A +
Sbjct: 407 ANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 466
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ D++ KG NV+TYN++I G CK G +E + +L +M D GC P+ +F ++I L++
Sbjct: 467 FQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526
Query: 477 SG-NEGEVG 484
N G VG
Sbjct: 527 KDENGGNVG 535
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 183/383 (47%), Gaps = 39/383 (10%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL-VHLMFKNSRHKFKVVPNVFTCNIL 191
AV R+E +Q + +LN L+N + ++ K + + P+ T N L
Sbjct: 78 AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP--PDTVTLNTL 135
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
IK LC K V+ A+ D++ + G N V++ T++ G GD A ++ I R
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLT 195
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ Y+ ++D K +++A + EM G+ + VTY +I FC K EA
Sbjct: 196 KPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD------------ 359
LL++M+ + P+ ++D LC+EGKV++A + +L+ PD
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 360 ------------NAIS-----------STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
NA+S + +I+ CK + EA LF E ++ +P ++
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY++LI G+C+S + L D+M ++G NV TY+ LI G CK G+ I + +M
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 456 LDKGCFPNKTSFSLLIEGLYESG 478
D+G PN +F++L++GL + G
Sbjct: 436 KDQGIRPNTFTFTILLDGLCKGG 458
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 150/332 (45%), Gaps = 36/332 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + N ++ + K A+ + + G+ P+L+T ++ + G I V
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
IL RG+ PD T L+ G G++ A+ D++ G + N+V+YG +I CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE------------------------- 337
+ A LL + R P+ + +ID LC+
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 338 ----------EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
EGK+++A L ++ K P+ + ++ LCKEGK+ EAK +
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ + P ++TY+TL+ G E+ +A +++ M GV P+V TY +LI GFCK
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + + +EM K P ++S LI+GL +SG
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A+ + + G+ P+L T ++ + G I + IL RG+ PD T+T L++
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G G++ A+ D++ G + N+V+YG +I CK
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCK--------------------- 1043
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
G A +L +++ + PD + +TII LCK + +A LF
Sbjct: 1044 --------------IGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLF 1089
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
E +G ++TYNTLI G C +L EA L + MV K + PNV TYN+L+ CK
Sbjct: 1090 FEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKE 1149
Query: 443 GN--AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G E + +L +M D GC N +F ++I L+E +V K++ A G
Sbjct: 1150 GKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 135/256 (52%), Gaps = 1/256 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++++A F +L P + ++D + K+ + AV + +E G++P+ +T
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I FC + ++L +L+R Y P + +I LC +G+V+ A +LL +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
+ T+I+ +CK G A KL + + R + P+++ Y+T+I +C+ ++EA
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ +M KG+ +V TY+ LI GFC G KE I +L EM+ K PN ++++L++
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 474 LYESGNEGEVGKVVSM 489
L + G E V+++
Sbjct: 279 LCKEGKVKEAKSVLAV 294
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 159/338 (47%), Gaps = 11/338 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y +II L + + L +E+ I + T+I + + G+ + A+
Sbjct: 198 NVVMYSTIIDALCKYQLVSEAYGLFSEMTVKG-ISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + +V + N L++AL + + ++ +M K V P+V T + L+
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC-----VKPDVITYSTLM 311
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+V+ A V + M MG+ P++ T+T ++ G+ ++ A +F ++ + V
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TY+ L+DG K GR+ ++DEM D G N +TY +I+ CK A L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIAL 431
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M + P++ ++D LC+ G+++DA E+++ LL K + + +I CK
Sbjct: 432 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCK 491
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAE 409
+G + EA + + E G IP +T+ +I + + E
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 11/260 (4%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTC 188
AV R+E +Q + +LN L+N + + ++ + K H P+ T
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYH-----PDTITF 999
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI LC K V A+ D++ + G N V++ T++ G GD A ++ I
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R PD Y ++D K ++ A + EM G+ + VTY +I FC K E
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK--VEDACELWKRLLRKNCMPDNAISSTI 366
A LL+ M+ + P+ ++D LC+EGK ++++ + ++ C + I
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179
Query: 367 IHWLCKEGKIWEAKKLFDEF 386
I L ++ + + +KL E
Sbjct: 1180 ISALFEKDENDKVEKLLHEM 1199
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 4/222 (1%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A + + ML ++ P K++D + A L RL K PD + +I
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 368 HWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ C G+I + L +RG P +T NTLI G+C ++ +A D ++ +G +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
N +Y LI G CKIG+ + I++L+++ + PN +S +I+ L + E +
Sbjct: 162 LNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGL 221
Query: 487 VSMATASG-SVESDSWNFLLTR--IVSDLDSGAGALDELLVK 525
S T G S + +++ L+ I L G L+E+++K
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 223/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR++L +M+ + P+ +++ ++I C G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAAKAEALVRQLLKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 190/333 (57%), Gaps = 4/333 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ + LL+A+ + K+YD+V +++ + + N+ TCNIL+ C+ + A+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQM-LGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGD-IENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
L +M +G P++VT ++L G+ RGD I +A +F +++ G+ P+ Y ++DG
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFC-RGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K ++ +A+ +++ ME +G+ P+ VTY +I C + +A ++ M +R+ P
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-E 385
+ID +EG++ +A EL++ ++R++ PD S +I+ LC ++ EA+++F
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+G P ++TY+ LI G C+S ++ +L+ +M ++GV N TY +LIQG+C+ G
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I + M+ G PN ++++L+ GL ++G
Sbjct: 378 NVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNG 410
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 223/453 (49%), Gaps = 11/453 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEI 110
R LD +L +F + + P S + ++ +++ + +D V L +++ P
Sbjct: 58 RYMKLDDSLDLFFHMVQCRPLPS--IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVH 169
C N+ + + + LA+ ++ K + + + +LLN + R YD ++
Sbjct: 116 LCTCNILLNC---FCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALY 172
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+ + ++ PNV N +I LCK V+ A+ +L+ M G+ P+ VT+ +++ G
Sbjct: 173 MFDRMVEMGYE--PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++A R+ + R PD T+ L+D +K GR+++A ++ +EM ++P+
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPD 290
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VTY ++I C + EA + M+ + P +I+ C+ KVE +L+
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESA 408
+ ++ + + + +I C+ GK+ A+++F G P+++TYN L+ G+C++
Sbjct: 351 EMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNG 410
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
++ +A + DM + G++ ++ TYN++I+G CK G + + + KG P+ +++
Sbjct: 411 KIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYT 470
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
++ GLY+ G GE + G + ++ +
Sbjct: 471 AMMLGLYKKGLRGEADALFRKMKEDGILPNECY 503
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 203/433 (46%), Gaps = 11/433 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P RL+S I + + D+ + ++ HN T + +++ R
Sbjct: 76 RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML--GIPHNLCTCNILLNCFCRCSQLS 133
Query: 96 AVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
S L +L P+I F +++ + R A+ F R+ + + +V
Sbjct: 134 LALSFLGKMMKLGHEPDIV----TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIY 189
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT+++ L ++K+ D L N + P+ T N LI LC + A R++ M
Sbjct: 190 NTIIDGLCKSKQVDNA-LDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT 248
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ P++ T ++ V G I A+ ++ +++ R PD TY++L+ G RL
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A ++ M G P+ VTY ++I +CK KK L +M QR V ++ +I
Sbjct: 309 EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLI 368
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP 392
C GK+ A E++K ++ P+ + ++H LC GKI +A + + ++ +
Sbjct: 369 QGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMD 428
Query: 393 S-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ ++TYN +I GMC++ E+ +A L+ + KG+ P+++TY ++ G K G E +
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADAL 488
Query: 452 LEEMLDKGCFPNK 464
+M + G PN+
Sbjct: 489 FRKMKEDGILPNE 501
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 3/243 (1%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ G R + Y ++ I+ +L D++ + M P+ + ++ A
Sbjct: 33 ICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDN 360
K KK L + M Q +P + C ++ + C ++ A ++++ PD
Sbjct: 93 KMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDI 151
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++++ C+ +I++A +FD E G P+++ YNT+I G+C+S ++ A L +
Sbjct: 152 VTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M G+ P+ TYN LI G C G + R++ M + +P+ +F+ LI+ + G
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 480 EGE 482
E
Sbjct: 272 ISE 274
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 183/371 (49%), Gaps = 25/371 (6%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
R V S N L+ LV+N R + H+ V PN +T NI++ LCK+ R
Sbjct: 312 RKVESYNRWLSGLVKNGRVGEAQELLSEMAHE-GVQPNSYTYNIIVDGLCKEGKAFDVRR 370
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
V D + S M P++VT+T++L Y +G+ A R+ ++ +G P+ TY VL+ +
Sbjct: 371 VEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLL 430
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM---------- 316
K GR T+ ++++ M + G + + ++I+ C+ K A +++D M
Sbjct: 431 KAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRR 490
Query: 317 -------------LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ + +P +++ LC+EG+ ++A + ++ K+ PD+ I
Sbjct: 491 LGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIY 550
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T IH C GK A K+ + E+ S PS +YN LI G E + E +L +M E
Sbjct: 551 DTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKE 610
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KG+ NV TYN LI+ FC G + + +L+EML PN TSF LLI+ ++ +
Sbjct: 611 KGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSA 670
Query: 483 VGKVVSMATAS 493
+V +A ++
Sbjct: 671 AQRVFDVALST 681
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 18/333 (5%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP--NVFTCNILIKALCKKDDVEGAIR 206
V + N LL AL R DL +R F +P N F+ IL + C+ A+
Sbjct: 143 VFTRNALLEALSAAGRMDL-------ARRVFDAMPARNEFSSGILARGYCRAGRSADALA 195
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
VLD MP M NLV T++ G+ G ++ A+R+ + +G P+ T+ +
Sbjct: 196 VLDAMPEM----NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALC 251
Query: 267 KLGRLTDAVKVMDEME---DNGV-EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
K GR+ +A ++ ++M+ + G+ P++VT+ VM+ FC EA L+D M ++
Sbjct: 252 KAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFL 311
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+ + L + G+V +A EL + + P++ + I+ LCKEGK ++ +++
Sbjct: 312 RKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRV 371
Query: 383 FDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
D G + P ++TY +L+ C T A R+ D+M +KG PN+FTYN+L+Q K
Sbjct: 372 EDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLK 431
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G E R+LE M +KG + S +++I+GL
Sbjct: 432 AGRTTEVERLLERMSEKGYSLDTASCNIIIDGL 464
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 18/322 (5%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P + +L + ++ + ++ D+L G PD T L++ GR+ A
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+V D M NE + G++ +C+ +S +A +LD M + V +C V+
Sbjct: 163 RRVFDAMPAR----NEFSSGILARGYCRAGRSADALAVLDAMPEMNLV----VCNTVVAG 214
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG----- 389
C EG+V++A L R+ + P+ + I LCK G++ EA ++F++ +
Sbjct: 215 FCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGL 274
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +T++ +++G C++ + EA L D M G V +YN + G K G E
Sbjct: 275 PRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQ 334
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTR 507
+L EM +G PN +++++++GL + G +V +V SG + D ++ LL
Sbjct: 335 ELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVR-SGVMTPDVVTYTSLLHA 393
Query: 508 IVSDLDSGAG--ALDELLVKNC 527
S ++ A LDE+ K C
Sbjct: 394 YCSKGNTTAANRILDEMAQKGC 415
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 182/436 (41%), Gaps = 31/436 (7%)
Query: 71 HPNFSHNYDTYHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLA 127
H N TY+ I+ L + +AFD VE + P++ + +++ Y
Sbjct: 342 HEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVT----YTSLLHAYCSK 397
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G A + + + ++ + N LL +L++ R V + + K + + +
Sbjct: 398 GNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSL-DTAS 456
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMV-----------------------PNLVTHT 224
CNI+I LC+ +E A+ ++D M + G + P+ +T++
Sbjct: 457 CNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYS 516
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T++ G + AK+ +++ + PD+ Y + GY G+ + A+KV+ +ME
Sbjct: 517 TLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKR 576
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
P+ +Y ++I F + +KS E L+ +M ++ + +I C G V A
Sbjct: 577 SCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKA 636
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGM 404
L +L+ +P+ +I CK A+++FD + Y + +
Sbjct: 637 MPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTEL 696
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
A EA + + +E + F Y +I G C + A +L+ + KG +
Sbjct: 697 STYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDP 756
Query: 465 TSFSLLIEGLYESGNE 480
+F +I+ L ESG +
Sbjct: 757 ATFMPVIDALSESGKK 772
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 172/404 (42%), Gaps = 31/404 (7%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY S++H A +L E+ Q C NLF ++++ AGR +
Sbjct: 386 TYTSLLHAYCSKGNTTAANRILDEMAQK---GCAPNLFTYNVLLQSLLKAGRTTEVERLL 442
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVF------- 186
R+ + S N +++ L +N + D+V M+ R + + N F
Sbjct: 443 ERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDS 502
Query: 187 -----------TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
T + L+ ALCK+ + A + L EM + P+ V + T + GY G
Sbjct: 503 SISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGK 562
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A +V D+ R P +Y +L+ G+ + + + +K+M EM++ G+ N +TY
Sbjct: 563 TSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNS 622
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I++FC +A LLD+MLQ + VP+ +I C+ A ++ L
Sbjct: 623 LIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVAL-ST 681
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEA 413
C + + L + EAK + + R SI S Y +IAG+C+ +E A
Sbjct: 682 CGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQS-FPYKRIIAGLCDVSEADHA 740
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
L + KG + T+ +I + G + + E+M++
Sbjct: 741 HSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMME 784
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 17/371 (4%)
Query: 151 SLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ NTL+NAL+ R + L+ M N P + T ++IK LCK+ ++E A R
Sbjct: 73 TYNTLVNALLGQGRAKEAFSLLERMAANG-----CPPELITFGLIIKGLCKEGEIEAAFR 127
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
V+DEM G VP++ HT +L G ++ A F +L G+ PDA TY ++DG
Sbjct: 128 VVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLY 187
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K GRL A V+ + ++ P T+ + ++ K A D M Q P++
Sbjct: 188 KAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTV 247
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ID LC+ GK++ A L + KN S+++H LC+ ++ EA +L
Sbjct: 248 TYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM 304
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+P+++ +N+L+ G+C++ + EA L+D M E G +V TYN+L++G CK+
Sbjct: 305 P--CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIP 362
Query: 447 EGIRILEEM-LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD--SWNF 503
E R +E M +GC PN +FS LI+GL +G + +V A + + ++ F
Sbjct: 363 EAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAF 422
Query: 504 LLTRIVSDLDS 514
LL + DS
Sbjct: 423 LLEGLCKAGDS 433
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 216/473 (45%), Gaps = 32/473 (6%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P P + L+ + + LD+AL + N + S++H L +A
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLR-----DKNSQAGMFAFSSLLHGLCQAH 292
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+ LL + P + C F +++ A R + A + F +++ V +
Sbjct: 293 RLEEAIQLLKAMPCVPNVVC----FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N LL L + +R + + R PNV T + LI+ LC V A V + M
Sbjct: 349 NILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Query: 213 SM-GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV------------------- 252
++ G+ PN T+ +L G GD ++ F +L+R W
Sbjct: 409 AVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV 468
Query: 253 --PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P TY L+ G K G + DA+ +++ M ++G+ P+ +T+ +++ CK ++ +A
Sbjct: 469 CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAH 528
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
N+ L+R P+ +ID L + K+++A +L +++ C + ST++ L
Sbjct: 529 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 588
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K G++ +A + + + G +P +TYNTLI G + L EA L +M+E G P+V
Sbjct: 589 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 648
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
TY L G C+ G E + IL+ M +GC PN ++S +++GL ++G E
Sbjct: 649 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N ++ LCK+ + A V G PN+VT++T++ G ++ A ++
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ G + TY+ ++DG +K+GR+ DAV V+ +M D G P+ VTY +I+ F K
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA LL +ML+ + PS + LC G+ ++A E+ + + C P+
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 685
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S+I+ LCK G++ EA F++ R + P ++ Y+ LI G+C++ + EA + M
Sbjct: 686 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+ G P+V T+++LI G C G G+ + M ++GC + +++ +I
Sbjct: 746 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMI 796
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 158/298 (53%), Gaps = 2/298 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + T N L+ L K V A+ +L+ M G+ P+++T ++L G I +A V
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F L+RG P+ TY+ L+DG K+ ++ +A++++ +M + G N VTY +++ K
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A +L M +P + +ID + ++ +A L + +L P
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+ H LC+ G+ EA ++ D RG P+ +TY++++ G+C++ +TEA ++ M
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710
Query: 422 -EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ V P+V Y+ LI G CK G E LE M+ G P+ +FS+LI GL ++G
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 149/292 (51%), Gaps = 4/292 (1%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N+LI LCK V A + G P +VT++T++ G +++ ++ ++
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
RG P+A TY L++ + GR +A +++ M NG P +T+G++I+ CK +
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A ++D+M+ R +VP + ++ LCE G+V++A ++++L PD +T+
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ L K G++ A + E S P++ T+ + G+ ++ LT A +D M + GV
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
PN TY+ LI G CK G + +L DK +FS L+ GL ++
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQA 291
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 202/443 (45%), Gaps = 43/443 (9%)
Query: 73 NFSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGR 129
S + T++S++ L + R DA K+ E C N+ + T+I +
Sbjct: 503 GLSPDVITFNSVLDGLCKEQRILDAHNVF----KRALERGCRPNVVTYSTLIDGLSKMAK 558
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ A++ ++ + + + + +T+++ L++ R + ++ + R +P+ T N
Sbjct: 559 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA-GCLPDAVTYN 617
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI K+ + A+ +L EM G P++VT+TT+ G G + A + + R
Sbjct: 618 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P+A TY+ ++DG K GR+T+A+ ++M D V P+ + Y +I+ CK + E
Sbjct: 678 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L+ M++ +P +I+ LC+ G+++ EL+ + + C D + +I+
Sbjct: 738 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797
Query: 369 WLCKEGKIWEAKKLFDEFER------------------------------GSIP----SL 394
C +G+ A L +E + SIP
Sbjct: 798 AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE 857
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
++YNTLI + S +A L MV G P+ Y ++ G K G+ + ++L+E
Sbjct: 858 ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQE 917
Query: 455 MLDKGCFPNKTSFSLLIEGLYES 477
M +G P+ +++++I GL ++
Sbjct: 918 MRSRGHSPDLRTYTIMISGLSKA 940
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 54/377 (14%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ NT+++ L + R + ++ + F P VFT I + L K ++ GA D
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSS-PTVFTFTIAVDGLSKAGNLTGAYEFFDS 236
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-------------------- 250
MP G+ PN VT+ ++ G G ++ A + D +
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEE 296
Query: 251 ---------WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VP+ + LM+G + R+ +A ++ D M+++G + +TY ++++ C
Sbjct: 297 AIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356
Query: 302 KGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLR-KNCMPD 359
K ++ EA ++ M + + P+ +I LC G+V A E+++R++ + P+
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDE-FERG---------------------SIPSLLTY 397
+ ++ LCK G ++ F++ ER P+L+TY
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTY 476
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NTL+ G+ +S + +A L + M+E G+ P+V T+N ++ G CK + + + L+
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536
Query: 458 KGCFPNKTSFSLLIEGL 474
+GC PN ++S LI+GL
Sbjct: 537 RGCRPNVVTYSTLIDGL 553
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 188/443 (42%), Gaps = 56/443 (12%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + L+ F++Q L A+ + FHP+ TY ++ H L R+ FD
Sbjct: 611 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV----TYTTLCHGLCRSGRFDE 666
Query: 97 VESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+L + C N + +++ AGR A+ F ++ + V
Sbjct: 667 AVEILDYMAAR---GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV--------- 714
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
V P+V + LI LCK ++ A L+ M
Sbjct: 715 --------------------------VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G +P++VT + ++ G G I+ +F + +RG D Y +++ Y G + A
Sbjct: 749 GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ--RKYVPSSALCCKVI 332
+++EM+ +G+ N VT+G++I+A C + EA + + + R + + L I
Sbjct: 809 YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTL----I 864
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
L + E A EL + ++ PD T++ L K G A KL E RG
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P L TY +I+G+ ++ +L A +++M+ K ++P+ Y+ LI FCK + ++
Sbjct: 925 PDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL 984
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
L G P T +S +++ L
Sbjct: 985 LRS---SGIEPTITMYSTMVDSL 1004
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 171/403 (42%), Gaps = 7/403 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R D A++I Y + N TY SI+ L +A ++ ++ +
Sbjct: 660 RSGRFDEAVEILDYMAA--RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 717
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+ +I AGR + A + R+ + V + + L+N L R D +F
Sbjct: 718 HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 777
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ +++ N +I A C K + A +L+EM + G+ N VTH ++
Sbjct: 778 CGMAER-GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCG 836
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
I+ A F I + D +Y L+ + R A++++ M +G P+
Sbjct: 837 NDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACN 894
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +++ K A LL +M R + P +I L + ++ AC+ ++ +L
Sbjct: 895 YMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEML 954
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTE 412
RKN PD + S++I CK K+ +A KL G P++ Y+T++ +C++ +
Sbjct: 955 RKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS--SGIEPTITMYSTMVDSLCKNRGTDK 1012
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
A + +M K EP + + L + G E ++++ ++
Sbjct: 1013 ALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 141/341 (41%), Gaps = 38/341 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y ++I L +A D L + + I F +I AGR + ++ F
Sbjct: 721 AYSALIDGLCKAGRIDEAYEFLERMIRAGRIP-DVVTFSILINGLCDAGRIDTGLELFCG 779
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + + N ++NA + + + + + + N T I+IKALC D
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMK-THGIAKNTVTHGIVIKALCGND 838
Query: 200 DV---------------------------------EGAIRVLDEMPSMGMVPNLVTHTTI 226
+ E A+ +L M + G P+ + T+
Sbjct: 839 RIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTV 898
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G G E A ++ ++ RG PD TYT+++ G K +L A +EM +
Sbjct: 899 MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL 958
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+P+ + Y +I+AFCK K +A LL P+ + ++D LC+ + A E
Sbjct: 959 KPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALE 1015
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ + + KNC P I +++ EG++ EA KL ++ +
Sbjct: 1016 VIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Query: 364 STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I+ LCK G++ +A F + + G P+++TY+T+I G+C E+ + +L ++M
Sbjct: 5 NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+G PN TYN L+ G AKE +LE M GC P +F L+I+GL + G
Sbjct: 65 RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124
Query: 483 VGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
+VV G V + +L + +L G +DE
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCEL----GRVDE 159
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN LI G+C++ + +A + ++ G P V TY+ +I G C+ +G ++LE
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
EM +GC PN +++ L+ L G E ++ A+G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANG 101
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 212/447 (47%), Gaps = 38/447 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++++ R DA L+ + P+ + +IR GR A+ +
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDM 202
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
Q SV + LL A+ ++ + + R K PN+ T N++I +C++
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGR 261
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A L+ + S G P+ V++TT+L G E+ + +F +++++ +P+ T+ +
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 321
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + + G + A++V+++M +G N ++I CK + +A L++M
Sbjct: 322 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + V+ LC + EDA EL K ++RKNC P+ +T I LC++G I +A
Sbjct: 382 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 441
Query: 381 KLFDEFE--------------------RGSI-------------PSLLTYNTLIAGMCES 407
L ++ +G + P+ +TY TL+ G+C +
Sbjct: 442 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNA 501
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L +M++K PNV T+N+L+ FC+ G E I ++E+M++ GC PN ++
Sbjct: 502 ERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITY 561
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ L++G+ + N E +++ ++G
Sbjct: 562 NTLLDGITKDCNSEEALELLHGLVSNG 588
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 199/416 (47%), Gaps = 11/416 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L +IRN GR A + E+ V + NTL+ + + D + +
Sbjct: 111 LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIAS- 169
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+ +T +I+ LC + V A+ +LD+M G P++VT+T +L
Sbjct: 170 ---MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 226
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V ++ +G P+ TY V+++G + GR+ DA + ++ + G +P+ V+Y
Sbjct: 227 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 286
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C K+ + L +M+++ +P+ ++ C G VE A ++ +++
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C + + + +I+ +CK+G++ +A + + G P ++Y T++ G+C + +A
Sbjct: 347 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 406
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +MV K PN T+N I C+ G ++ ++E+M + GC N +++ L+ G
Sbjct: 407 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466
Query: 475 YESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G + + SM ++ ++ LLT + + LD+ A L E+L K+C
Sbjct: 467 CVQGRVDSALELFYSMPCKPNTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDC 519
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 151/294 (51%), Gaps = 4/294 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P+V+ C LI+ LC++ A RVL G ++ + T++ GY G ++ A+R
Sbjct: 106 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 165
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ + PDA TYT ++ G GR+ +A+ ++D+M G +P+ VTY V++EA C
Sbjct: 166 LIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 222
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K G+A +LD+M + P+ +I+ +C EG+V+DA E RL PD
Sbjct: 223 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 282
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T++ LC + + ++LF E E+ +P+ +T++ L+ C + A ++ + M
Sbjct: 283 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 342
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G N N++I CK G + + L M GC P+ S++ +++GL
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 10/395 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++ + ++ F +L E++ C N+ + +I GR + A +
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ + Q S T+L L KR++ V +F K +PN T ++L++ C+
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDMLVRFFCR 328
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
VE AI+VL++M G N ++ +G +++A + ++ G PD +
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT ++ G + R DA +++ EM PNEVT+ I C+ +A L++ M
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + +++ C +G+V+ A EL+ + C P+ +T++ LC ++
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 505
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +L E ++ P+++T+N L++ C+ + EA L + M+E G PN+ TYN L+
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
G K N++E + +L ++ G P+ ++S +I
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 199/429 (46%), Gaps = 8/429 (1%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + R+ +D A + + + F + +Y +++ L A+ ++ VE L E+ +
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ E F ++R + G E A++ ++ + N ++N + + R D
Sbjct: 310 KNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 368
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
F N+ + P+ + ++K LC+ + E A +L EM PN VT T
Sbjct: 369 DA-FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 427
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +G IE A + + + G + TY L++G+ GR+ A+++ M
Sbjct: 428 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---C 484
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+PN +TY ++ C ++ A LL +MLQ+ P+ ++ C++G +++A E
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
L ++++ C P+ +T++ + K+ EA +L G P ++TY+++I +
Sbjct: 545 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 604
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ EA +++ + + G+ P YN ++ CK N I M+ GC PN+
Sbjct: 605 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664
Query: 466 SFSLLIEGL 474
++ LIEGL
Sbjct: 665 TYITLIEGL 673
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 7/328 (2%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A R++D S G P++ T ++ RG +A RV G D Y L+
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY + G+L A +++ M V P+ TY +I C + GEA +LLDDML R P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
S +++ +C+ A E+ + K C P+ + II+ +C+EG++ +A++
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 384 DEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ G P ++Y T++ G+C + + L+ +M+EK PN T++ML++ FC+
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSW 501
G + I++LE+M GC N T +++I + + G + + + +M + S ++ S+
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389
Query: 502 NFLLTRI--VSDLDSGAGALDELLVKNC 527
+L + + L E++ KNC
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNC 417
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 175/397 (44%), Gaps = 10/397 (2%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRN 123
+A N N T+ ++ R VE + L+Q C N + VI
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRG---GMVERAIQVLEQMSGHGCAANTTLCNIVINT 360
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
GR + A + + + S T+L L + +R++ + K K P
Sbjct: 361 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPP 419
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N T N I LC+K +E A ++++M G N+VT+ ++ G+ +G +++A +F
Sbjct: 420 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ + P+ TYT L+ G RL A +++ EM PN VT+ V++ FC+
Sbjct: 480 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 536
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
EA L++ M++ P+ ++D + ++ E+A EL L+ PD
Sbjct: 537 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 596
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S+II L +E ++ EA K+F + G P + YN ++ +C+ A + MV
Sbjct: 597 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 656
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
G PN TY LI+G KE +L E+ +G
Sbjct: 657 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 11/342 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-- 104
+++ I +Q +D A Q + G + S + +Y +++ L RA ++ + LL E+
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSY--GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
K P + N FI ++ GL E A ++ + + ++ + N L+N R
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLI---EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D +F + PN T L+ LC + ++ A +L EM PN+VT
Sbjct: 472 VDSALELF----YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 527
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ + +G ++ A + +++ G P+ TY L+DG K +A++++ + N
Sbjct: 528 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 587
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GV P+ VTY +I + + EA + + P + + K++ LC+ + A
Sbjct: 588 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 647
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ + ++ CMP+ T+I L E + E + L E
Sbjct: 648 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
S A L+D R P LC K+I LC G+ DA + + R D +T
Sbjct: 90 SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
++ C+ G++ A++L P TY +I G+C+ + EA L DDM+ +G
Sbjct: 150 LVAGYCRYGQLDAARRLIASMPVA--PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGC 207
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+P+V TY +L++ CK + + +L+EM KGC PN +++++I G+ G
Sbjct: 208 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 260
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 45/415 (10%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + +++LV + + +++T +I I C++ + A+ V
Sbjct: 82 SIVEFNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+T L+ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D+M G +P+ VTYG ++ CK A NLL+ M + + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC---------------- 371
+ID LC+ VE A +L+ + K P+ +++I+ LC
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 372 -------------------KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
KEGK+ EA+KL +E + SI P +TYN LI G C L
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +++ MV K PN+ TYN LI GFCK ++G+ + EM +G N +++ +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIVSDLDSGAGALDELLV 524
+G +++G + + ++V S V +D +++ LL + S G LD LV
Sbjct: 441 QGFFQAG-DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS-----YGKLDTALV 489
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 201/398 (50%), Gaps = 6/398 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++++ L + D +LL ++ + IK +F T+I + E+AV F
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ +V + N+L+N L R+ + N K K+ PNV T N LI A K+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEG 342
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ +EM + P+ +T+ ++ G+ ++ AK++F ++ + +P+ TY
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G+ K R+ D V++ EM G+ N VTY +I+ F + A+ + M+
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 320 KYVPSSALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ VP+ + ++ LC GK++ A ++K L + + I +T+I +CK GK+ E
Sbjct: 463 R-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 379 AKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
A LF P ++TYNT+I+G+C L EA L+ M E G PN TYN LI+
Sbjct: 522 AWDLFCSLSIK--PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ + +++EM G + ++ SL+ L++
Sbjct: 580 NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 225/498 (45%), Gaps = 49/498 (9%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESL--LTELKQNPE 109
R+ L LAL + A + + T S+++ + R DAV + + E+ P+
Sbjct: 130 RRSQLSLALAVL--AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
F T+I L + AV ++ + Q + + T++N L + DL
Sbjct: 188 TFT----FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA- 242
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
L N ++ NV N +I +LCK VE A+ + EM + G+ PN+VT+ +++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +A R+ ++L++ P+ T+ L+D + K G+L +A K+ +EM ++P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+TY ++I FC + EA+ + M+ + +P+ +I+ C+ +VED EL++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 350 RLLRKNCMPDNAISSTII-----------------------------------HWLCKEG 374
+ ++ + + +TII H LC G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 375 KIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ A +F ++ + ++ YNT+I GMC++ ++ EA WD ++P+V TYN
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYN 539
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+I G C +E + +M + G PN +++ LI + +++ +S
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 494 GSVESDSWNFLLTRIVSD 511
G V S L+T ++ D
Sbjct: 600 GFVGDASTISLVTNMLHD 617
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FGD++ P + L+ K+ + + + ++M+ G+ + TY +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I FC+ + A +L M++ Y P +++ C ++ DA L +++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL---- 410
PD +T+IH L K EA L D+ +RG P L+TY T++ G+C+ ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 411 -----TEAGR--------------------------LWDDMVEKGVEPNVFTYNMLIQGF 439
EA R L+ +M KG+ PNV TYN LI
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMATASGSVES 498
C G + R+L ML+K PN +F+ LI+ ++ G E K+ M S ++
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 499 DSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
++N L+ + LD ++ K+C
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 11/277 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAV 97
P + L++ LD A Q+F + + N TY+++I+ + R D V
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFM--VSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 98 ESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E L E+ Q + G + + T+I+ + AG + A F ++ V + + + LL
Sbjct: 419 E-LFREMSQRGLV--GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L + D ++FK K ++ N+F N +I+ +CK V A D S+ +
Sbjct: 476 HGLCSYGKLDTALVIFK-YLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSI 531
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++VT+ T++ G + ++ A +F + + G +P++ TY L+ ++ + +
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
++ EM +G + T ++ G+ N+L
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
KV+DA +L+ +++ P + ++ + K K L ++ + I L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
I C ++L+ A + M++ G EP++ T + L+ G+C + + ++++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P+ +F+ LI GL+ E +V G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 224/497 (45%), Gaps = 88/497 (17%)
Query: 89 ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA----GRPELAVKTFLRIEKFN 144
A R DA++ +L + Q + C N+F I GL + L + + + +
Sbjct: 138 ADKRTSDAMDIVLRRMTQ---LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 145 VQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
V S T++N + +K Y H M ++PNV T + +I ALCK
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG-----ILPNVVTYSSIIAALCKAQA 249
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ VL M G++PN T+ +I+ GY G + A + G PD TY
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-- 318
LMD K GR T+A K+ D M G++P TYG +++ + E LLD M++
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 319 ---RKYVPSSALCC------------------------------KVIDLLCEEGKVEDAC 345
YV S +C VI +LC+ G+VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWL----------------------------------- 370
+++++ + P N + +++IH L
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CKEG++ E++KLFD R G P ++TY+TLI G C + ++ EA +L MV G++P+
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN LI G+CKI ++ + + EM G P+ +++++++GL+++ ++
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609
Query: 490 ATASGS-VESDSWNFLL 505
T SG+ +E ++N +L
Sbjct: 610 ITESGTQLELSTYNIIL 626
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 212/438 (48%), Gaps = 7/438 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ F++ +LD A +H N TY SII L +A+A D
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEM--LDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 99 SLLTELKQNPEI-KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+LT + +N + C + +++ Y +G+P+ A+ ++ V+ V + N+L++
Sbjct: 255 EVLTSMVKNGVMPNC--RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L +N R MF +S K + P + T L++ K + +LD M G+
Sbjct: 313 YLCKNGRCTEARKMF-DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN + ++ Y +G ++ A VF + +G PD TY ++ K GR+ DA++
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++M D + P + Y +I + C K +A+ L+ +ML R + +ID C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
EG+V ++ +L+ ++R PD ST+I C GK+ EA KL G P +T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YNTLI G C+ + + +A L+ +M GV P++ TYN+++QG + + +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 457 DKGCFPNKTSFSLLIEGL 474
+ G +++++++ GL
Sbjct: 612 ESGTQLELSTYNIILHGL 629
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 39/338 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
+V PN+ T ILI K LC A
Sbjct: 86 EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW--VPDATTYTVL 261
+ VL M +G +PN+ ++ +L G + A + + D G PD +YT +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++G+ K G L A EM D G+ PN VTY +I A CK + +A +L M++
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P+ ++ C G+ ++A K++ PD ++++ +LCK G+ EA+K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+FD +RG P + TY TL+ G L E L D MV G+ PN + +++LI +
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G + + + +M +G P+ ++ +I L +SG
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 128/247 (51%), Gaps = 4/247 (1%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TY +L+ GRL + + G + + + +++ C K++ +A +
Sbjct: 88 TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIH 368
+ L M Q +P+ ++ LC+E + ++A EL + + +C PD +T+I+
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
KEG + +A + E +RG +P+++TY+++IA +C++ + +A + MV+ GV P
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TYN ++ G+C G KE I L++M G P+ +++ L++ L ++G E K+
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 488 SMATASG 494
T G
Sbjct: 328 DSMTKRG 334
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTFLR 139
Y+S+IH L +D + L+ E+ C + +F ++I ++ GR + K F
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRG--ICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V+ + + +TL++ + D + S + P+ T N LI CK
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA-SMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A+ + EM S G+ P+++T+ IL G AK ++ I + G + +TY
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+++ G K +A+++ + ++ T+ +MI A K ++ EA++L +
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP + + L E+G +E+ +L+ + C ++ + ++I+ L + G I A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 41/157 (26%)
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG---VEPNVFTYN 433
+A+ +FDE RG S+ N +A + + R ++ M G V PN+ TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTYG 95
Query: 434 MLIQ----------GFCKIGNA-KEGIR-------------------------ILEEMLD 457
+LI GF +GN K+G R +L M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
GC PN S+++L++GL + E +++ M G
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDG 192
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 225/432 (52%), Gaps = 17/432 (3%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ +G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI----PSLL-----TYNTLIAGMCESAE 409
+ +I CK G+ +A KL D+ I S L YN +I +C + +
Sbjct: 325 EAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPNAYNPMIEYLCNNGQ 384
Query: 410 LTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
++A L +++ GV+ P N LI+G + G+ +L+ ML + K++++
Sbjct: 385 ASKAETLVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYN 442
Query: 469 LLIEGLYESGNE 480
L++ Y NE
Sbjct: 443 SLVQS-YLKKNE 453
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 207/392 (52%), Gaps = 2/392 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F R+++ ++ + + TLL++LV++++ D +F N + +VP+ F NI++
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIF-NELQESSLVPDTFVYNIMV 710
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
L K + V+ A +++D M + ++P+L T+T++L G G +E A +F + + G
Sbjct: 711 NGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHE 770
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD YT LMD K G+L+ A+ + M P+ VTY +I++ K + EA
Sbjct: 771 PDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYF 830
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++ + + P+ + +ID ++G V+ A EL++ + R+ C P+ + ++ L K
Sbjct: 831 FENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAK 890
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ A+KL +E E+ G +P L+TYN LI G+ + + EA + M EKG+ P+V T
Sbjct: 891 AGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVIT 950
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+ LI+ K+ E + + M ++G P+ ++++LI+ L +G E +
Sbjct: 951 FTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMK 1010
Query: 492 ASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
G + ++ RI+S + AL+E L
Sbjct: 1011 VKGCMPDGITIGIMKRILSVREQQFHALEEGL 1042
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 205/400 (51%), Gaps = 3/400 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++ D LL +K++ I + T++ G AGR + AV
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT-YTTLVDGLGKAGRLDEAVSLLRE 588
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+EK + SV + ++L+ + + + + +F K V +V T +++I LCK D
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK-GCVADVSTYSLVINCLCKSD 647
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
DV+ A+ V M GM P L + T+L V I+ A ++F ++ + VPD Y
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++++G +K R+ +A K++D M++ + P+ TY +++ K + EA N+ M +
Sbjct: 708 IMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P ++D+L + GK+ A +++ + +K C+PD S++I L KEG++ EA
Sbjct: 768 GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
F+ +G P++ Y++LI + + A L+++M + PN+ TYN L+ G
Sbjct: 828 YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G ++LEEM GC P+ ++++LI+G+ + G
Sbjct: 888 LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMG 927
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 231/504 (45%), Gaps = 70/504 (13%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+L P + ++ Q++L LA F +AG+ +SH TY +I +LA A+ DAV +
Sbjct: 146 KLNPGLVCDVVVNQKDLHLAKCFFTWAGQ-QDGYSHTVGTYTLMIKRLAGAQETDAVVQI 204
Query: 101 LTEL-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
LT + K+ I +L +++R +G A++ F +++ F S N +L L
Sbjct: 205 LTAMWKEGHRISM--HLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELL 262
Query: 160 VQNKRYD-----------------------LVHLMFKNSRH-----------KFKVVPNV 185
V+ Y VH ++ R K + P V
Sbjct: 263 VKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGV 322
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T +LI AL K +++ A + + M ++ PN+VT+TT++ G G +E A VF +
Sbjct: 323 HTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVE 382
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ + PDA Y L+DG K G A + EM+D G+ PN TY +MI K +
Sbjct: 383 MKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGR 442
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN--CM------ 357
EA L D+ ++ VP +ID+L + G+++ + K ++ K C+
Sbjct: 443 QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSN 502
Query: 358 ----------------PDNAISS-------TIIHWLCKEGKIWEAKKLFDEFERGS-IPS 393
P S T++ G + EA KL + ++ IP+
Sbjct: 503 AGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPT 562
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TY TL+ G+ ++ L EA L +M ++G EP+V TY+ L+ F K +E + + +
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622
Query: 454 EMLDKGCFPNKTSFSLLIEGLYES 477
EM+ KGC + +++SL+I L +S
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKS 646
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 228/466 (48%), Gaps = 40/466 (8%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + + N+D A + F+ G + S N TY ++++ LA+A + + E+K+
Sbjct: 328 LIDALVKSGNIDEACKFFN--GMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
N C + + T+I G AG ++A F ++ + ++R+ N +++ L + R
Sbjct: 386 N---NCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGR 442
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM------------- 211
+F + + + VP+VFT N LI L K ++ + ++ EM
Sbjct: 443 QPEAWQLFHDLKEQ-GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDS 501
Query: 212 -----------------PSMGMVP-NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
PS+G +T+ T++ ++ G ++ A ++ + +P
Sbjct: 502 NAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIP 561
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TYT L+DG K GRL +AV ++ EME G EP+ VTY ++ +F K + E+ +L
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLF 621
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M+++ V + VI+ LC+ V+ A +++ R+ + P T++ L K+
Sbjct: 622 DEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKD 681
Query: 374 GKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
KI A ++F+E + S +P YN ++ G+ +S + EA +L D M + + P++FTY
Sbjct: 682 EKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTY 741
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
L+ G K G +E + +M ++G P+ +++ L++ L + G
Sbjct: 742 TSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGG 787
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 175/353 (49%), Gaps = 5/353 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
K L+S + + + +D ALQIF+ + + + Y+ +++ L ++ D L+ +
Sbjct: 672 KTLLSSLVKDEKIDFALQIFNELQE--SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM 729
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
K N I + +++ G +GR E A F ++ + + V + +L++ L + +
Sbjct: 730 K-NQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
++F+ + K + VP+V T + LI +L K+ VE A + S G PN+ ++
Sbjct: 789 LSHALIIFR-AMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS 847
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ + +G ++ A +F ++ R P+ TY L+ G K GRL A K+++EME
Sbjct: 848 SLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV 907
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G P+ VTY ++I+ K EA + M ++ VP +I+ L + K+ +A
Sbjct: 908 GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEA 967
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLT 396
CEL+ + + P + +I L + GK+ EA +F E + +G +P +T
Sbjct: 968 CELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 161/334 (48%), Gaps = 4/334 (1%)
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ +V K L F + + V T ++IK L + + +++L M G
Sbjct: 154 DVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGH 213
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
++ T++L + ++ A +F + G P Y +++ +K G AV
Sbjct: 214 RISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVI 273
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V ++ ++P+ T+ + + +F + + A + +M++ P +ID L
Sbjct: 274 VFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALV 333
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
+ G +++AC+ + + C P+ +T+++ L K G++ EA ++F E E P +
Sbjct: 334 KSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAI 393
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
YNTLI G+ ++ E A L+ +M ++G+ PN+ TYN++I K G E ++ ++
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
++G P+ +++ LI+ L G G++ KV+++
Sbjct: 454 KEQGAVPDVFTYNTLIDVL---GKGGQMDKVLAI 484
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 180/328 (54%), Gaps = 3/328 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ N LL LV+ +R+ + +F++ N T N LI CK D+E A ++L E
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G P++VTH++I+ G++ A + F + ++ PD+ + +L+ G K +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQ 188
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L++A ++++EM + G+ P+ VTY +I+ CK + EAR LL+ M++RK P+
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG- 389
+I C+ G A +L +R+++ PD +++I C++ KI +A ++ ++G
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+L+TYN LI+G+C++ EA L +M +G+ P++ TYN LI FC+ ++
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYES 477
+I M+++G P+ S+ L L +S
Sbjct: 369 QIQNLMVERGVIPDGISYCTLAVALLKS 396
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 222/462 (48%), Gaps = 5/462 (1%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS-HNYDTYHSIIHKLARARA 93
+ + + L P + ++ +++D++L F + + H S HN T + ++ L +AR
Sbjct: 25 LAKYSRNLVPNTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARR 84
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
+ + + T+I + AG E A + +++ V + +
Sbjct: 85 HHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHS 144
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+++ AL F+ S + P+ NIL+ LCK + + A ++++EM
Sbjct: 145 SIVQALCNTGNLSRAMQYFRES---VECAPDSVLFNILVHGLCKANQLSEARQMIEEMSE 201
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G+VP++VT+ +++ G +E A+++ ++ R P+ TY L+ GY K G
Sbjct: 202 RGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGL 261
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A ++++ M +G P+ VT+ +I FC+ K +A +L M + P+ +I
Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLIS 321
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIP 392
LC+ G+ +ACEL + + +PD +++I C+ +I +A ++ + ERG IP
Sbjct: 322 GLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP 381
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++Y TL + +S EA L D+M + G PN+FT+N L++G C E +L
Sbjct: 382 DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
M GC P +++ +L+ GL ++G + +V+ M + G
Sbjct: 442 AVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEG 483
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 194/408 (47%), Gaps = 11/408 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N+ TY+++I +A + LL E+K+ +P++ ++ + + N G R A
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSI-VQALCNTGNLSR---A 159
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ F E N L++ L + + M + + +VP+V T N LI
Sbjct: 160 MQYFR--ESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSER-GIVPDVVTYNSLID 216
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK +E A ++L+ M + PNLVT+ T++ GY G A ++ ++ G P
Sbjct: 217 GLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP 276
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T+ L+ G+ + ++ A +V+ M+ PN VTY V+I C ++ EA LL
Sbjct: 277 DVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELL 336
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M R +P +I + C ++E A ++ ++ + +PD T+ L K
Sbjct: 337 SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+ EA L D F+ G+IP+L T+N+L+ G+C S L EA L M G +P TY
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+L+ G CK G + +L M+ +G P +S ++ L G +
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQ 504
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 14/312 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I L ++ + LL + + K NL + T+I Y G LA +
Sbjct: 210 TYNSLIDGLCKSYRMEEARQLLETMVKR---KVRPNLVTYNTLIYGYCKTGCTGLAHQLI 266
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIK 193
R+ + V + N+L++ Q + D ++HLM K PN+ T N+LI
Sbjct: 267 ERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG-----LCAPNLVTYNVLIS 321
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC A +L EM G++P+++T+ +++G + IE A ++ +++RG +P
Sbjct: 322 GLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP 381
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D +Y L +K R +A ++D M D G PN T+ ++E C ++ EAR+LL
Sbjct: 382 DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M + P+++ ++ LC+ G+V+DA E+ ++ + P + S TI+H L +E
Sbjct: 442 AVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLARE 501
Query: 374 GKIWEAKKLFDE 385
GK A FD+
Sbjct: 502 GKQDLALHYFDQ 513
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK-VIDLLCEEGKVEDACEL 347
N T ++ K ++ +A + D L ++ ++ + +I C+ G +E A +L
Sbjct: 68 NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCES 407
+ + PD S+I+ LC G + A + F E + S+L +N L+ G+C++
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVL-FNILVHGLCKA 186
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+L+EA ++ ++M E+G+ P+V TYN LI G CK +E ++LE M+ + PN ++
Sbjct: 187 NQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTY 246
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASGS 495
+ LI G ++G G +++ SG+
Sbjct: 247 NTLIYGYCKTGCTGLAHQLIERMIQSGT 274
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 198/396 (50%), Gaps = 3/396 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T I+ L + R F L E+ Q + E ++ IR Y + A R
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQ-CKFPLDEYVYTAGIRAYCEIRNLDGARGLLTR 220
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E V+ S N L+ L +N R L + KNS + +V + T L+ C+ +
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRV-LEAVEVKNSMVERGIVADEVTYRTLVYGFCRTE 279
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++E A+ + D+M S+ VP++ + + ++ G RG I+ A R+ + + G VP+
Sbjct: 280 ELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACN 339
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+D K R +A ++ M + G+EPNEVTY ++I + CK +A + D M ++
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ +I+ C+ A L ++ K P A S +I LC++G + A
Sbjct: 400 GIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L E R + ++ T+ TLI+G C+ + EA RL+D M++ V PN T+N++I+G
Sbjct: 460 MELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEG 519
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+C++GN ++ ++ ++M+D+G P+ ++ LI L
Sbjct: 520 YCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVL 555
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 153/292 (52%), Gaps = 1/292 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N+L+ LC+ + V A+ V + M G+V + VT+ T++ G+ ++E A + D+L
Sbjct: 234 NVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLS 293
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+VP + + ++DG K G + A ++ + + G+ PN +I+ CK ++ E
Sbjct: 294 LHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFRE 353
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L M R P+ +I LC+ G ++DA ++ R+ K +++I+
Sbjct: 354 AERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLIN 413
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C+ +A+ L +E E+G PS +Y+ LIAG+C +L A L +M GV
Sbjct: 414 GYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSG 473
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
NV+T+ LI GFCK GN E R+ ++M+D PN+ +F+++IEG GN
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 194/405 (47%), Gaps = 6/405 (1%)
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
+++I KL + R F E L + N ++ E + +I + G + A+ F R+
Sbjct: 339 NALIDKLCKDRRFREAERLFRGM-ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMR 397
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+ ++ +V N+L+N Q+ + + K + P+ + + LI LC+K D+
Sbjct: 398 EKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK-GLAPSAASYSPLIAGLCRKGDL 456
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
A+ + EM G+ N+ T TT++ G+ G+++ A R+F ++D VP+ T+ V+
Sbjct: 457 ASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVM 516
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++GY ++G + A ++ D+M D G+ P+ TY +I C + +A+ +DD+
Sbjct: 517 IEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCV 576
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
V +S ++ C+EG++ + +W + + D + I++ K +
Sbjct: 577 VLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISV 636
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LF E E+G P + + +I + + +A WD M+ G PNV TY +LI C
Sbjct: 637 LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLC 696
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
K G + EEML PN +++ ++ L NEGE+ K
Sbjct: 697 KSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFL---ANEGELEK 738
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 174/344 (50%), Gaps = 8/344 (2%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+T + ++ AL K A + DEM + +T + Y +++ A+ +
Sbjct: 161 YTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTR 220
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ +G A Y VLM G + R+ +AV+V + M + G+ +EVTY ++ FC+ ++
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A + DDML +VPS A C ++D L + G ++ A L L +P+ +
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNA 340
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I LCK+ + EA++LF RG P+ +TY LI +C+ + +A ++D M EKG
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG--- 481
+ V+ YN LI G+C+ N + +L EM++KG P+ S+S LI GL G+
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460
Query: 482 EVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELL 523
E+ + ++ SG+V ++ L++ D +D A D+++
Sbjct: 461 ELHREMARNGVSGNVY--TFTTLISGFCKDGNMDEAARLFDKMI 502
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 152/279 (54%), Gaps = 4/279 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
VV N F+ L+ CK+ + + DEM + G+ +L++ T I+ + D E
Sbjct: 576 VVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKIS 635
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++ ++G PD +T ++D + K + A+ D+M +G PN VTY V+I
Sbjct: 636 VLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHL 695
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK A+ L ++ML +++P+S +D L EG++E A L +L + C+ +
Sbjct: 696 CKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANT 754
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I CK G+I A L + E G P ++Y+T+I +C+ ++ +A +LW++
Sbjct: 755 VTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNE 814
Query: 420 MVEKGVEPNVFTYNMLIQGFCKI-GNAKEGIRILEEMLD 457
M+ KG++P++ YN+LI+ +C I G +G+ I +M++
Sbjct: 815 MLYKGLKPDIVAYNILIR-WCNIHGEFDKGLGIYSDMVN 852
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 36/250 (14%)
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y++L R DA V+ +G+ + T ++ A K ++ AR+L D+M+Q K+
Sbjct: 135 YLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLD 194
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ I CE ++ A L R+ K + +++ LC+ ++ EA ++ +
Sbjct: 195 EYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKN 254
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV---------------------- 421
ERG + +TY TL+ G C + EL A + DDM+
Sbjct: 255 SMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRG 314
Query: 422 -------------EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
E G+ PN+F N LI CK +E R+ M ++G PN+ +++
Sbjct: 315 HIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYA 374
Query: 469 LLIEGLYESG 478
+LI L + G
Sbjct: 375 ILIHSLCKRG 384
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 212/428 (49%), Gaps = 16/428 (3%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE--IKCGENLF 117
ALQ F++A + ++H +Y S++ L R R + + L +++ +K F
Sbjct: 95 ALQFFNWAQEM--GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+++RN+ AG + ++K F ++ V SV + N+LL L++ R ++ ++
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V P+ FT NILI+ C V+ R+ +++ G P++VT+ T++ G G +
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272
Query: 238 NAKRVFGDILDRG--WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V + + P+ TYT L+ GY + A+ V +EM + G++ N +TY
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332
Query: 296 MIEAFCKGKKSGEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I+ C+ +K + +++L+ + P + ++ C G ++DA ++++R+
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FER-------GSIPSLLTYNTLIAGMCE 406
PD+A S ++ LC+ G +A+ L D+ ER G P + YN + +CE
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + +A + + ++ +G + + +Y LI G CK G + G +L ML K P+ +
Sbjct: 453 TGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFET 511
Query: 467 FSLLIEGL 474
+ LI GL
Sbjct: 512 YESLINGL 519
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 41/280 (14%)
Query: 248 DRGWVP-DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
RG V +A + LM + + G +++KV M+ +GV P+ VT+ ++ K ++
Sbjct: 141 SRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRT 200
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A+ + D+ML V PD + +
Sbjct: 201 NMAKKVYDEMLSTYGVT----------------------------------PDTFTFNIL 226
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I C G + + ++F++ R G P ++TYNTL+ G+C + ++T A + M +K V
Sbjct: 227 IRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSV 286
Query: 426 E--PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ PNV TY LI+G+C ++ + + EEM+++G N +++ LI+GL E+ ++
Sbjct: 287 DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346
Query: 484 GKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
++ G+ D+ F + AG LD+ L
Sbjct: 347 KDILEGTAGDGTFSPDTCTF---NTLMHCHCHAGNLDDAL 383
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 162/366 (44%), Gaps = 11/366 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+++I L AR F+ ++ +L + F T++ + AG + A+K
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKV 385
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVV-----PNVFTCNI 190
F R+ + +Q + + L+ +L Q Y+ L+ K K + P V N
Sbjct: 386 FERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNP 445
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+ K LC+ + A + ++ G + ++ T++ G+ G E+ + +L +
Sbjct: 446 IFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKD 504
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
++PD TY L++G + + + A++ +++M + PN T+ ++ + ++ E+
Sbjct: 505 FLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESA 564
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L+ ML + + + + LL G + A +L L K + +I +L
Sbjct: 565 SLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYL 621
Query: 371 CKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C K+ + K L E + NT+I +CE +L+EA L+ +VE GV +
Sbjct: 622 CHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQL 681
Query: 430 FTYNML 435
N L
Sbjct: 682 SCQNQL 687
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 224/432 (51%), Gaps = 20/432 (4%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++
Sbjct: 23 KNAEHALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDX 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
++++ +I +YG AG + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 81 DMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N++I VE A R ++M S + P+++T+ T++ GY
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ + P+ TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +ML + P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIA 402
+ + +I CK G+ +A KL D+ I PS YN +I
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMEPS--AYNXMIE 377
Query: 403 GMCESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+C + + +A L +++ GV+ P N LI+G + G+ +L+ ML +
Sbjct: 378 YLCNNGQXAKAETLVRQLLKLGVQDPTAL--NTLIRGHSREGSPDSAFELLKIMLRRKVD 435
Query: 462 PNKTSFSLLIEG 473
K+++ L++
Sbjct: 436 SEKSAYDSLVQS 447
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 152/335 (45%), Gaps = 13/335 (3%)
Query: 165 YDLVHLMFKNSRHKFKVV-----PNVFTCN-----ILIKALCKKDDVEGAIRVLDEMPSM 214
Y+++H KN+ H + N+F N +I+ L + + A +L +MP
Sbjct: 16 YNVLHGA-KNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ + ++ Y G ++ + ++F + + G +Y L ++ GR A
Sbjct: 75 GLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMA 134
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ ++M G+EP T+ VMI F K A +DM R+ P +I+
Sbjct: 135 KRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMING 194
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
K+E+A + + + KN P+ +T+I ++ +A +L +E + G P+
Sbjct: 195 YYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPN 254
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM-LIQGFCKIGNAKEGIRIL 452
+TY+TL+ G+C + +++EA + +M++K + P + M LI CK GN +L
Sbjct: 255 AITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVL 314
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ M+ + +LIE ++G + K++
Sbjct: 315 KAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLL 349
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 136/312 (43%), Gaps = 44/312 (14%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N TH I+ + +A+ + D+ +G D + +++D Y K G + ++VK+
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLF 103
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME+ GVE +Y + + + + M+ ++Y
Sbjct: 104 QKMEELGVERTIKSYDALFKVILRRGRY---------MMAKRY----------------- 137
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+ ++L + P + +I GK+ A + F++ + I P ++TY
Sbjct: 138 ---------FNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITY 188
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I G ++ EA + + +M K +EPNV TY LI+G+ + + +R++EEM
Sbjct: 189 NTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKG 248
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------D 511
G PN ++S L+ GL + E ++ +D N + R++S +
Sbjct: 249 YGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTD--NSIFMRLISSQCKAGN 306
Query: 512 LDSGAGALDELL 523
LD+ A L ++
Sbjct: 307 LDAAADVLKAMI 318
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 217/460 (47%), Gaps = 13/460 (2%)
Query: 40 QRLYPKRLVS------MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
R YP R ++ +I R N + + ++ + + N +H Y TY+ ++ L +
Sbjct: 30 SRFYPDRQLTPLIAFEVIKRFNNPKVGFKFLEFS-RLNLNVNHCYSTYNLLMRSLCQMGH 88
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D V + + + + L ++ A ++ K ++ V+ + N
Sbjct: 89 HDLVNIVFDYMGSDGHLP-DSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYN 147
Query: 154 TLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
LL+ LV QN+ ++ ++L FK + P+ +T NILI+ LC+ V+ A V +M
Sbjct: 148 NLLSVLVKQNQVHEAIYL-FK-EYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDME 205
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATTYTVLMDGYIKLGRL 271
S G +P++VT+ T++ G +++ +F +I R PD TYT ++ G+ K G++
Sbjct: 206 SFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKM 265
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A + +EM +G++PN +T+ V+I+ F K EA + M +
Sbjct: 266 KEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSL 325
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
ID C G+V + W + +N P + +I+ LCKE ++ EA+ + + SI
Sbjct: 326 IDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSI 385
Query: 392 -PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P YN +I G C++ + E + +M EK +P+ T+ +LI G C G E I
Sbjct: 386 IPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAIN 445
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
I ML C P+ + + LI L ++G E ++ MA
Sbjct: 446 IFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMA 485
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 119/273 (43%), Gaps = 1/273 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I+ L +A L E++ + + ++I + +G+ + A F
Sbjct: 215 TYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEE 274
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + +Q +V + N L++ + M++ + F +V T LI C+
Sbjct: 275 MMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAY-FDCSADVVTFTSLIDGYCRAG 333
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V ++ + M + + P + T+ ++ + A+ G I + +P Y
Sbjct: 334 QVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYN 393
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++DG+ K G + + ++ EME+ +P++VT+ ++I C + EA N+ + ML
Sbjct: 394 PVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLAT 453
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ P + +I L + G +A + K L
Sbjct: 454 RCAPDNITVNSLISCLLKAGMPNEAYRIRKMAL 486
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 172/360 (47%), Gaps = 68/360 (18%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T +L++A+CK E A+ VLDEM + G PN+VT+ I+ G G +++A+ +
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ G PD +YT L+ G R D ++ EM + PNEVT+ ++I FC+
Sbjct: 235 LNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 294
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA-----------C------ 345
G A +L M + + ++ LC VI+ +C++G+V+DA C
Sbjct: 295 GGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTIS 354
Query: 346 ------------------ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
EL K ++R NC P+ +T I LC++G I +A L ++ +
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414
Query: 388 --------------------RGSI-------------PSLLTYNTLIAGMCESAELTEAG 414
+G I P+ +TY TL+ G+C + L A
Sbjct: 415 EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAA 474
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +M+ + PNV T+N+L+ FC+ G E I ++E+M++ GC PN +++ L +G+
Sbjct: 475 ELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 198/416 (47%), Gaps = 11/416 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L +IRN GR A + E V + NTL+ + D + +
Sbjct: 77 LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGS- 135
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+ +T LI+ LC + V A+ +LD+M G PN+VT+T +L
Sbjct: 136 ---MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSG 192
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E A V ++ +G P+ TY V+++G + GR+ DA +++ + G +P+ V+Y
Sbjct: 193 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTT 252
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C K+ + L +M+++ +P+ +I C G VE A ++ +++
Sbjct: 253 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE 312
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C + + + +I+ +CK+G++ +A K + G P ++Y T++ G+C + +A
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAK 372
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +MV PN T+N I C+ G ++ I ++E+M + GC +++ L+ G
Sbjct: 373 ELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGF 432
Query: 475 YESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G+ + + SM ++ ++ LLT + + LD+ A + E+L ++C
Sbjct: 433 CVQGHIDSALELFRSMPCKPNTI---TYTTLLTGLCNAERLDAAAELVAEMLHRDC 485
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 213/493 (43%), Gaps = 74/493 (15%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY ++ + + F+ ++L E++ C N+ + +I GR + A
Sbjct: 176 NVVTYTVLLEAMCKNSGFEQAMAVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAR 232
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
R+ + Q S TLL L +KR+D V +F K +PN T ++LI+
Sbjct: 233 DLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK-NCMPNEVTFDMLIRF 291
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
C+ VE AI+VL +M N ++ +G +++A + ++ G PD
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+YT ++ G + R DA +++ EM N PNEVT+ I C+ +A L++
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 411
Query: 315 DMLQ-------------------RKYVPSS-----ALCCK--------VIDLLCEEGKVE 342
M + + ++ S+ ++ CK ++ LC +++
Sbjct: 412 QMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLD 471
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
A EL +L ++C P+ + ++++ C++G + EA +L ++ E G P+L+TYNTL
Sbjct: 472 AAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFT------------------------------ 431
G+ + +A L +V KGV P+V T
Sbjct: 532 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591
Query: 432 -----YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
YN ++ G CK I L M+ GC PN++++ +LIEGL G E +
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651
Query: 487 VSMATASGSVESD 499
+SM + G V +
Sbjct: 652 LSMLCSRGVVSKN 664
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 152/347 (43%), Gaps = 34/347 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ I +Q +D A + + G + N + +Y +++ L RA ++ + LL E+ +
Sbjct: 323 VINSICKQGRVDDAFKFLNNMGSYGCN--PDTISYTTVLKGLCRAERWNDAKELLKEMVR 380
Query: 107 N--PEIKCGENLFITVIRNYGLAGRPELAVKTFLR-------------IEKFNVQRSVRS 151
N P + N FI ++ GL + + ++ + F VQ + S
Sbjct: 381 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDS 440
Query: 152 ----------------LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
TLL L +R D + H+ PNV T N+L+
Sbjct: 441 ALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR-DCPPNVVTFNVLVNFF 499
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+K ++ AI ++++M G PNL+T+ T+ G E+A + ++ +G PD
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDV 559
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T++ ++ K R+ +A+++ +D G+ P + Y ++ CK + A + L
Sbjct: 560 ITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAY 619
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
M+ +P+ + +I+ L EG +++A +L L + + N I
Sbjct: 620 MVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLI 666
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 209/463 (45%), Gaps = 61/463 (13%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY---DLVHLMF 172
+F ++I Y +G A K ++ Q N L+ + N++ D++ L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430
Query: 173 KNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
K VV N + L + LC E A ++ EM S G +P+ T++ ++G
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
++NA +F ++ VPD TYT+L+D + K+G L A K DEM +G PN
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I A+ K +K A L + ML +P+ +ID C+ G++E AC+++ R
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 351 LLRKNCMPD---------------NAIS-STIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
+ +PD N + ++ LCK K+ EA+ L D G P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML------------------ 435
+ Y+ LI G C+ +L EA ++ M E+G PNV+TY+ L
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730
Query: 436 -----------------IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I G CK+G E R++ M +KGC PN +++ +I+G G
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF---G 787
Query: 479 NEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G+V K + + G+ + + NF+ R++ + AG LD+
Sbjct: 788 KAGKVDKCLELMRQMGA-KGCAPNFVTYRVLINHCCAAGLLDD 829
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 184/403 (45%), Gaps = 30/403 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY ++IH +AR + L + C N+ + +I + +G+ E A
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSE---GCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + R+ NA + + V + FK + PN+FT L+
Sbjct: 606 QIYARMRG--------------NADIPD-----VDMYFKIDDGNIRD-PNIFTYGALVDG 645
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK V+ A +LD M G PN + + ++ G+ G ++ A+ VF + +RG+ P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY+ L+D K RL A+KV+ M +N PN + Y MI+ CK K+ EA L+
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M ++ P+ +ID + GKV+ EL +++ K C P+ +I+ C G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825
Query: 375 KIWEAKKLFDEFERGSIPSLLT-YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ +A +L DE ++ P + Y +I G + E + L D++ E P + Y
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYR 883
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCF--PNKTSFSLLIEGL 474
+LI FCK G + + + + M + +K +S LIE L
Sbjct: 884 ILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESL 926
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 214/496 (43%), Gaps = 67/496 (13%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
++ + ++L +V ++ +N +L ++ F +AG+ + H YH+++ L
Sbjct: 120 LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGR-QIGYGHTGPVYHALLEVLGCGGND 178
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E L E++ + G+ L +IR G +A++ R++ + S + N
Sbjct: 179 RVPEQFLREIRDEDKEILGK-LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNA 237
Query: 155 LLNALVQNKRYD-----------------------LVHLMFKNSR----------HKFKV 181
L+ ++ R D VHL+ K R +FK+
Sbjct: 238 LVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL 297
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
++T +I LC+ E A+ L M S +PN+VT+ +L G + + + KR
Sbjct: 298 DTVIYT--QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ G P + L+ Y + G + A K++ +M D G +P V Y ++I C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+K +PS +D+L E A + + +L + + +
Sbjct: 416 GNEK----------------LPS-------LDVL------ELAEKAYGEMLDAHVVLNKV 446
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S + LC GK +A + E +G IP TY+ +I +C ++++ A L+++M
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V P+VFTY +LI FCK+G ++ + +EM+ GC PN +++ LI ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566
Query: 481 GEVGKVVSMATASGSV 496
++ M + G +
Sbjct: 567 SSANELFEMMLSEGCI 582
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 140/337 (41%), Gaps = 49/337 (14%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY +++ L +A LL + C N ++ +I + G+ + A
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVE---GCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL----VHLMFKNSRHKFKVVPNVFTCNI 190
F ++ + +V + ++L++ L ++KR DL + M +NS PNV
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS-----CAPNVIIYTE 746
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LCK + A R++ M G PN+VT+T ++ G+ G ++ + + +G
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEME---------------------------- 282
P+ TY VL++ G L DA +++DEM+
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGL 866
Query: 283 -----DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM--LQRKYVPSSALCCKVIDLL 335
+N P Y ++I++FCK + A L M L +I+ L
Sbjct: 867 LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESL 926
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
KV+ A EL+ ++++ +P+ +I ++ L +
Sbjct: 927 SLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 168/332 (50%), Gaps = 4/332 (1%)
Query: 149 VRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+ + T+++ L +NK+ + V LM K + + P + T N L+ LCK +E AI +
Sbjct: 34 IHTYTTIVDWLAKNKKIQEAVALMEKITANG--CTPTIATYNALLNGLCKMGRLEEAIDL 91
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L ++ G P++VT+T+++ G + A ++F ++ RG D YT L+ G ++
Sbjct: 92 LRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 151
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G++ A V M G P+ VT MI+ CK + G A + M R P+ +
Sbjct: 152 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 211
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-F 386
+I LC+ K++ A E+ ++ + C PD + +I LCK G + A+ FDE
Sbjct: 212 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEML 271
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E G P + TYN LI+G C++ A ++DDM PNV TY LI G CK
Sbjct: 272 EAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLT 331
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + M ++GC P+ +S L++GL +SG
Sbjct: 332 KASLYYQHMKERGCPPDSFVYSSLVDGLCKSG 363
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 185/400 (46%), Gaps = 15/400 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
T+ +I+ L +A SL E N C ++ + T++ + + AV
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTN---GCTIDIHTYTTIVDWLAKNKKIQEAVALM 57
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+I ++ + N LLN L + R DL+ + N P+V T LI
Sbjct: 58 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-----CTPDVVTYTSLID 112
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
L KK A ++ EM S G+ + V +T ++ G + G I A V+ + +G VP
Sbjct: 113 GLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 172
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T + ++DG K GR+ AV++ ME G+ PNEV Y +I CK +K A +L
Sbjct: 173 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 232
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
M + P + +ID LC+ G V A + +L C PD + +I CK
Sbjct: 233 AQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKA 292
Query: 374 GKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G A +FD+ P+++TY TLI+G+C+ +LT+A + M E+G P+ F Y
Sbjct: 293 GNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVY 352
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+ L+ G CK G + G + +EM G ++T L+
Sbjct: 353 SSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 392
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 166/325 (51%), Gaps = 2/325 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ + L+N LV+ H + + + + ++ T ++ L K ++ A+ ++++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTI-DIHTYTTIVDWLAKNKKIQEAVALMEK 59
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ + G P + T+ +L G G +E A + I+D G PD TYT L+DG K R
Sbjct: 60 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+A K+ EM G+ + V Y +I + K +A ++ M + VP
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG- 389
+ID LC+ G++ A ++K + + P+ + S +IH LCK K+ A ++ + ++
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +TYN LI G+C+S ++ A +D+M+E G +P+V+TYN+LI GFCK GN
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++M C PN ++ LI GL
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGL 324
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 178/379 (46%), Gaps = 9/379 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++++ L + + LL ++ N P++ + ++I G R A K
Sbjct: 71 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV----TYTSLIDGLGKKKRSFEAYKL 126
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + L+ L+Q + ++K + VP+V T + +I LC
Sbjct: 127 FKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ-GCVPDVVTLSTMIDGLC 185
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+R+ M + G+ PN V ++ ++ G ++ A + + PD
Sbjct: 186 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 245
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+DG K G + A DEM + G +P+ TY ++I FCK + A + DDM
Sbjct: 246 TYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 305
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P+ +I LC+ ++ A ++ + + C PD+ + S+++ LCK GK+
Sbjct: 306 SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKL 365
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
LFDE ER + + T LI +C++ + EA L++ + ++G+ P+ + YN +I
Sbjct: 366 EGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 424
Query: 437 QGFCKIGNAKEGIRILEEM 455
K G EG + +EM
Sbjct: 425 SALIKSGKVNEGQAVYQEM 443
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 39/278 (14%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
+ N Y ++IH L +AR D +L ++K
Sbjct: 205 LAPNEVVYSALIHGLCKARKMDCALEMLAQMK---------------------------- 236
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K F + + N L++ L ++ F + + P+V+T NILI
Sbjct: 237 -KAFCTPDTI-------TYNILIDGLCKSGDVAAARAFF-DEMLEAGCKPDVYTYNILIS 287
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK + + A V D+M S PN+VT+ T++ G R + A + + +RG P
Sbjct: 288 GFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPP 347
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D+ Y+ L+DG K G+L + DEME +GV N T +I CK + EA +L
Sbjct: 348 DSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLF 406
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+ ++++ +P +I L + GKV + +++ +
Sbjct: 407 -NAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
+I+ L + G + A L + C D +TI+ WL K KI EA L ++ G
Sbjct: 5 LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ TYN L+ G+C+ L EA L +V+ G P+V TY LI G K + E
Sbjct: 65 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ +EM +G + ++ LI GL ++G + V T+ G V
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 171
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 209/463 (45%), Gaps = 61/463 (13%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY---DLVHLMF 172
+F ++I Y +G A K ++ Q N L+ + N++ D++ L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430
Query: 173 KNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
K VV N + L + LC E A ++ EM S G +P+ T++ ++G
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
++NA +F ++ VPD TYT+L+D + K+G L A K DEM +G PN
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I A+ K +K A L + ML +P+ +ID C+ G++E AC+++ R
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 351 LLRKNCMPD---------------NAIS-STIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
+ +PD N + ++ LCK K+ EA+ L D G P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML------------------ 435
+ Y+ LI G C+ +L EA ++ M E+G PNV+TY+ L
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730
Query: 436 -----------------IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I G CK+G E R++ M +KGC PN +++ +I+G G
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF---G 787
Query: 479 NEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G+V K + + G+ + + NF+ R++ + AG LD+
Sbjct: 788 KAGKVDKCLELMRQMGA-KGCAPNFVTYRVLINHCCAAGLLDD 829
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 30/403 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY ++IH +AR + L + C N+ + +I + +G+ E A
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSE---GCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + R+ NA + + V + FK + PN+FT L+
Sbjct: 606 QIYARMRG--------------NADIPD-----VDMYFKIDDGNIRD-PNIFTYGALVDG 645
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK V+ A +LD M G PN + + ++ G+ G ++ A+ VF + +RG+ P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY+ L+D K RL A+KV+ M +N PN + Y MI+ CK K+ EA L+
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M ++ P+ +ID + GKV+ EL +++ K C P+ +I+ C G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825
Query: 375 KIWEAKKLFDEFERGSIPSLLT-YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ +A +L DE ++ P + Y +I G + E + L D++ E P + Y
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYR 883
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCF--PNKTSFSLLIEGL 474
+LI FCK G + + + +EM + +K +S LIE L
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESL 926
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 214/496 (43%), Gaps = 67/496 (13%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
++ + ++L +V ++ +N +L ++ F +AG+ + H YH+++ L
Sbjct: 120 LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGR-QIGYGHTGPVYHALLEVLGCGGND 178
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E L E++ + G+ L +IR G +A++ R++ + S + N
Sbjct: 179 RVPEQFLREIRDEDKEILGK-LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNA 237
Query: 155 LLNALVQNKRYD-----------------------LVHLMFKNSR----------HKFKV 181
L+ ++ R D VHL+ K R +FK+
Sbjct: 238 LVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL 297
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
++T +I LC+ E A+ L M S +PN+VT+ +L G + + + KR
Sbjct: 298 DTVIYT--QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ G P + L+ Y + G + A K++ +M D G +P V Y ++I C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+K +PS +D+L E A + + +L + + +
Sbjct: 416 GNEK----------------LPS-------LDVL------ELAEKAYGEMLDAHVVLNKV 446
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S + LC GK +A + E +G IP TY+ +I +C ++++ A L+++M
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V P+VFTY +LI FCK+G ++ + +EM+ GC PN +++ LI ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566
Query: 481 GEVGKVVSMATASGSV 496
++ M + G +
Sbjct: 567 SSANELFEMMLSEGCI 582
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 23/353 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY +++ L +A LL + C N ++ +I + G+ + A
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVE---GCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL----VHLMFKNSRHKFKVVPNVFTCNI 190
F ++ + +V + ++L++ L ++KR DL + M +NS PNV
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS-----CAPNVIIYTE 746
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LCK + A R++ M G PN+VT+T ++ G+ G ++ + + +G
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TY VL++ G L DA +++DEM+ + Y +IE F ++ +
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISL 864
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTI 366
LLD++ + VP +ID C+ G++E A EL K + +C D + S++
Sbjct: 865 GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSL 922
Query: 367 IHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
I L K+ +A +L+ D +RG IP L + L+ G+ EA +L D
Sbjct: 923 IESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 208/443 (46%), Gaps = 16/443 (3%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P P P + +RL++ +++L A+++ +G Y I + R R
Sbjct: 37 PNAPNPASAHLRRLIA----REDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRT 92
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
DA L + + T++ Y G + A + I V +
Sbjct: 93 SDAARVLRAAEGSGSPVDVFA--YNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYT 147
Query: 154 TLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
L+ L R D + L+ R + PNV T +L++A+C+ E A+ VLDEM
Sbjct: 148 PLIRVLCDRGRVADALSLLDDMLRRGCQ--PNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ G PN+VT+ I+ G G +++A+ + + G+ PD +YT L+ G R
Sbjct: 206 AKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWD 265
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
D ++ EM + PNEVT+ ++I FC+G A +L+ M + ++ LC VI
Sbjct: 266 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVI 325
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI- 391
+ +C++G+V+DA +L + C PD +T++ LC+ + +AK+L +E R +
Sbjct: 326 NSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCP 385
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+ +T+NT I +C+ + +A L + M E G V TYN L+ GFC G+ + +
Sbjct: 386 PNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALEL 445
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
M C PN +++ L+ GL
Sbjct: 446 FRSM---PCKPNTITYTTLLTGL 465
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 207/428 (48%), Gaps = 38/428 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y++++ R DA L+ + P+ + +IR GR A+
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLIGSMPVAPDAY----TYTPLIRVLCDRGRVADALSLLDD 168
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + Q +V + LL A+ +N ++ + R K PN+ T N++I +C++
Sbjct: 169 MLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAK-GCTPNIVTYNVIINGMCREG 227
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A +L+ +PS G P+ V++TT+L G ++ + +F +++++ +P+ T+
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ + + G + A++V+++M ++G N ++I + CK + +A LL+DM
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY 347
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P + V+ LC + +DA EL ++R NC P+ +T I LC++G I +A
Sbjct: 348 GCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQA 407
Query: 380 KKLFDEFE--------------------RGSI-------------PSLLTYNTLIAGMCE 406
L ++ +G I P+ +TY TL+ G+C
Sbjct: 408 IMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCN 467
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ L A L +M+ PNV T+N+L+ FC+ G +E I ++E+M++ GC PN +
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527
Query: 467 FSLLIEGL 474
++ L++G+
Sbjct: 528 YNTLLDGI 535
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 200/416 (48%), Gaps = 11/416 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L +IRN GR A + E V + NTL+ + D + +
Sbjct: 78 LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGS- 136
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+ +T LI+ LC + V A+ +LD+M G PN+VT+T +L
Sbjct: 137 ---MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSG 193
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E A V ++ +G P+ TY V+++G + GR+ DA ++++ + G +P+ V+Y
Sbjct: 194 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTT 253
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C K+ + L +M+++ +P+ +I C G VE A ++ +++
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C + + + +I+ +CK+G++ +A KL ++ G P ++Y T++ G+C + +A
Sbjct: 314 CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAK 373
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L ++MV PN T+N I C+ G ++ I ++E+M + GC +++ L+ G
Sbjct: 374 ELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGF 433
Query: 475 YESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G+ + + SM ++ ++ LLT + + LD A + E+L +C
Sbjct: 434 CVQGHIDSALELFRSMPCKPNTI---TYTTLLTGLCNAERLDGAAELVAEMLRGDC 486
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 195/398 (48%), Gaps = 10/398 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY ++ + R F+ ++L E++ C N+ + +I GR + A
Sbjct: 177 NVVTYTVLLEAMCRNSGFEQAMAVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAR 233
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ R+ + Q S TLL L +KR+D V +F K +PN T ++LI+
Sbjct: 234 ELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK-NCMPNEVTFDMLIRF 292
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
C+ VE AI+VL++M G N ++ +G +++A ++ D+ G PD
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+YT ++ G + R DA ++++EM N PNEVT+ I C+ +A L++
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + +++ C +G ++ A EL++ + C P+ +T++ LC
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAE 469
Query: 375 KIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
++ A +L E RG P +++T+N L++ C+ L EA L + M+E G PN+ TYN
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYN 529
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
L+ G K ++++ + +L ++ KG P+ +FS +I
Sbjct: 530 TLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 146/314 (46%), Gaps = 36/314 (11%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG------------------------ 285
G PD T L+ + GR +DA +V+ E +G
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 286 --------VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
V P+ TY +I C + +A +LLDDML+R P+ +++ +C
Sbjct: 131 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
E A + + K C P+ + II+ +C+EG++ +A++L + G P ++
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y TL+ G+C S + L+ +M+EK PN T++MLI+ FC+ G + I++LE+M
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLLTRI--VSDLD 513
+ GC N T +++I + + G + K+++ M + + ++ S+ +L + D
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370
Query: 514 SGAGALDELLVKNC 527
L+E++ NC
Sbjct: 371 DAKELLNEMVRNNC 384
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 158/339 (46%), Gaps = 11/339 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ I +Q +D A ++ + G + N + +Y +++ L RA +D + LL E+ +
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCN--PDTISYTTVLKGLCRAERWDDAKELLNEMVR 381
Query: 107 N--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
N P + N FI ++ GL E A+ ++ + V + N L+N
Sbjct: 382 NNCPPNEVTFNTFICILCQKGLI---EQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D +F++ K PN T L+ LC + ++GA ++ EM PN+VT
Sbjct: 439 IDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFN 494
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ + +G +E A + +++ G P+ TY L+DG K DA++++ +
Sbjct: 495 VLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSK 554
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GV P+ +T+ +I K + EA L + P + + K++ LC+ ++++A
Sbjct: 555 GVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNA 614
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ + ++ CMP+ + +I L EG + EA+ L
Sbjct: 615 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLL 653
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 208/432 (48%), Gaps = 5/432 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I L +AR D L EL N + C + T+I YG AG+ + A R
Sbjct: 310 TYTTLIGVLCKARRLDEAVELFEELDLNRSVPC-VYAYNTMIMGYGSAGKFDEAYSLLER 368
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ SV + N +L L + + + + R PN+ T NILI LCK
Sbjct: 369 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD--AAPNLTTYNILIDMLCKAG 426
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++E A++V D M G+ PN++T ++ ++ A +F + + PD+ T+
Sbjct: 427 ELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFC 486
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG + GR+ DA + ++M D+ PN V Y +I+ F K + + + +M+ R
Sbjct: 487 SLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHR 546
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P L +D + + G+VE L++ + + +PD S +IH L K G E
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRET 606
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KLF E E+G +L YNT+I G C+S ++ +A +L ++M KG++P V TY ++ G
Sbjct: 607 YKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDG 666
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVE 497
KI E + EE G N +S LI+G + G E ++ G +
Sbjct: 667 LAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 726
Query: 498 SDSWNFLLTRIV 509
S +WN LL +V
Sbjct: 727 SYTWNCLLDALV 738
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 217/444 (48%), Gaps = 5/444 (1%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+ +V ++ R +++++A Q F + + +H + Y++ + +AR R D +E +L E
Sbjct: 100 PEVIVGVMKRLKDVNVAFQYFRWVER-KTQQAHCPEVYNAFLMVMARTRNLDYLEQILEE 158
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ ++ + ++ ++ + + + A + KF + + + TL+ AL
Sbjct: 159 MSV-AGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAAN 217
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
R D + +F + + NV L++ ++ ++ A+ +LDEM S +LV +
Sbjct: 218 RPDPMLTLF-HQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLY 276
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+ + G ++ A + F ++ +G VPD TYT L+ K RL +AV++ +E++
Sbjct: 277 NVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDL 336
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
N P Y MI + K EA +LL+ ++ +PS ++ L +GKVE+
Sbjct: 337 NRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEE 396
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
A + +R++ P+ + +I LCK G++ A K+ D E G P+++T N +I
Sbjct: 397 ALRIHDE-MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMID 455
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+C++ +L EA ++ + K P+ T+ LI G + G + + E+MLD P
Sbjct: 456 RLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIP 515
Query: 463 NKTSFSLLIEGLYESGNEGEVGKV 486
N ++ LI+ ++ G + + K+
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKI 539
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 215/441 (48%), Gaps = 5/441 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + ++ + + Q LD A IF G H S + T+ S+I L R D
Sbjct: 444 FPNIMTVNIMIDRLCKAQKLDEACSIF--LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDA 501
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
SL ++ + +I ++ ++I+N+ GR E K + + + LN+ ++
Sbjct: 502 YSLYEKMLDSDQIP-NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMD 560
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ + + +F+ + + +VP+V + +ILI L K ++ EM G+
Sbjct: 561 CVFKAGEVEKGRALFEEIKAQ-GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLH 619
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+++ + T++ G+ G ++ A ++ ++ +G P TY ++DG K+ RL +A +
Sbjct: 620 LDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYML 679
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+E + GV+ N V Y +I+ F K + EA +L++++Q+ P+S ++D L +
Sbjct: 680 FEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVK 739
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
++++A ++ + C P+ S +I+ LC K +A + E ++ G P+ +T
Sbjct: 740 AEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNIT 799
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y T+IAG+ ++ + EA L+D G P+ YN +I+G A + + EE
Sbjct: 800 YTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETR 859
Query: 457 DKGCFPNKTSFSLLIEGLYES 477
KGC N + +L++ L+++
Sbjct: 860 LKGCRVNSKTCVVLLDALHKA 880
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 229/483 (47%), Gaps = 17/483 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA---VESLLTE 103
+++ + R+ ++ AL+I + + + N TY+ +I L +A +A V+ + E
Sbjct: 384 ILTCLGRKGKVEEALRIHD---EMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKE 440
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P I N+ I + A + + A FL ++ R+ +L++ L +
Sbjct: 441 AGLFPNIMT-VNIMIDRLCK---AQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRG 496
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
R D + +++ ++ PNV LI+ K E ++ EM G P+L+
Sbjct: 497 RVDDAYSLYEKMLDSDQI-PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLL 555
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+ + G++E + +F +I +G VPD +Y++L+ G +K G + K+ EM++
Sbjct: 556 NSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKE 615
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G+ + + Y +I+ FCK K +A LL++M + P+ V+D L + ++++
Sbjct: 616 QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDE 675
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
A L++ + I S++I K G+I EA + +E ++G P+ T+N L+
Sbjct: 676 AYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLD 735
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ ++ E+ EA + +M PN TY+++I G C I + +EM +G P
Sbjct: 736 ALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKP 795
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSDLDSGAGALDE 521
N +++ +I GL ++GN E + ASG V +S +N ++ L S A+D
Sbjct: 796 NNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYN----AMIEGLSSANKAMDA 851
Query: 522 LLV 524
+V
Sbjct: 852 YIV 854
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ ++K +L +A V++ M P Y +I A + L M +
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y + L ++ + EG+++ A L + + D + + I K GK+ A
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K F E + +G +P +TY TLI +C++ L EA L++++ P V+ YN +I G+
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
G E +LE KGC P+ +++ ++ L G GKV + D
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCL------GRKGKVEEALRIHDEMRQD 407
Query: 500 SW-NFLLTRIVSDLDSGAGALDELL 523
+ N I+ D+ AG L+ L
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAAL 432
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 8/268 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+++I ++ D LL E+K P + + +V+ R + A
Sbjct: 624 AYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT----YGSVVDGLAKIDRLDEAYML 679
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V +V ++L++ + R D +L+ + K + PN +T N L+ AL
Sbjct: 680 FEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-GLTPNSYTWNCLLDALV 738
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++++ A M ++ PN +T++ ++ G A + ++ +G P+
Sbjct: 739 KAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNI 798
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT ++ G K G + +A + D + +G P+ Y MIE K+ +A + ++
Sbjct: 799 TYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEET 858
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+ +S C ++D L + +E A
Sbjct: 859 RLKGCRVNSKTCVVLLDALHKADCLEQA 886
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 212/447 (47%), Gaps = 38/447 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++++ R DA L+ + P+ + +IR GR A+ +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
Q SV + LL A+ ++ + + R K PN+ T N++I +C++
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGR 230
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A L+ + S G P+ V++TT+L G E+ + +F +++++ +P+ T+ +
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + + G + A++V+++M +G N ++I CK + +A L++M
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + V+ LC + EDA EL K ++RKNC P+ +T I LC++G I +A
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 381 KLFDEFE--------------------RGSI-------------PSLLTYNTLIAGMCES 407
L ++ +G + P+ +TY TL+ G+C +
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNA 470
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L +M++K PNV T+N+L+ FC+ G E I ++E+M++ GC PN ++
Sbjct: 471 ERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITY 530
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ L++G+ + N E +++ ++G
Sbjct: 531 NTLLDGITKDCNSEEALELLHGLVSNG 557
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 199/416 (47%), Gaps = 11/416 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L +IRN GR A + E+ V + NTL+ + + D + +
Sbjct: 80 LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIAS- 138
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+ +T +I+ LC + V A+ +LD+M G P++VT+T +L
Sbjct: 139 ---MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V ++ +G P+ TY V+++G + GR+ DA + ++ + G +P+ V+Y
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C K+ + L +M+++ +P+ ++ C G VE A ++ +++
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C + + + +I+ +CK+G++ +A + + G P ++Y T++ G+C + +A
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +MV K PN T+N I C+ G ++ ++E+M + GC N +++ L+ G
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 475 YESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G + + SM ++ ++ LLT + + LD+ A L E+L K+C
Sbjct: 436 CVQGRVDSALELFYSMPCKPNTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDC 488
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 151/293 (51%), Gaps = 4/293 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+ C LI+ LC++ A RVL G ++ + T++ GY G ++ A+R+
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ PDA TYT ++ G GR+ +A+ ++D+M G +P+ VTY V++EA CK
Sbjct: 136 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
G+A +LD+M + P+ +I+ +C EG+V+DA E RL PD
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 363 SSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ LC + + ++LF E E+ +P+ +T++ L+ C + A ++ + M
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G N N++I CK G + + L M GC P+ S++ +++GL
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 10/395 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++ + ++ F +L E++ C N+ + +I GR + A +
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ + Q S T+L L KR++ V +F K +PN T ++L++ C+
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDMLVRFFCR 297
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
VE AI+VL++M G N ++ +G +++A + ++ G PD +
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT ++ G + R DA +++ EM PNEVT+ I C+ +A L++ M
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + +++ C +G+V+ A EL+ + C P+ +T++ LC ++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +L E ++ P+++T+N L++ C+ + EA L + M+E G PN+ TYN L+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
G K N++E + +L ++ G P+ ++S +I
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 169/343 (49%), Gaps = 7/343 (2%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N ++ L +DD+ A R++D S G P++ T ++ RG +A RV
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G D Y L+ GY + G+L A +++ M V P+ TY +I C + GE
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +LLDDML R PS +++ +C+ A E+ + K C P+ + II+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+C+EG++ +A++ + G P ++Y T++ G+C + + L+ +M+EK P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N T++ML++ FC+ G + I++LE+M GC N T +++I + + G + + +
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343
Query: 488 -SMATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
+M + S ++ S+ +L + + L E++ KNC
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 199/429 (46%), Gaps = 8/429 (1%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + R+ +D A + + + F + +Y +++ L A+ ++ VE L E+ +
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ E F ++R + G E A++ ++ + N ++N + + R D
Sbjct: 279 KNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
F N+ + P+ + ++K LC+ + E A +L EM PN VT T
Sbjct: 338 DA-FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +G IE A + + + G + TY L++G+ GR+ A+++ M
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---C 453
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+PN +TY ++ C ++ A LL +MLQ+ P+ ++ C++G +++A E
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
L ++++ C P+ +T++ + K+ EA +L G P ++TY+++I +
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ EA +++ + + G+ P YN ++ CK N I M+ GC PN+
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633
Query: 466 SFSLLIEGL 474
++ LIEGL
Sbjct: 634 TYITLIEGL 642
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 175/397 (44%), Gaps = 10/397 (2%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRN 123
+A N N T+ ++ R VE + L+Q C N + VI
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRG---GMVERAIQVLEQMSGHGCAANTTLCNIVINT 329
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
GR + A + + + S T+L L + +R++ + K K P
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPP 388
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N T N I LC+K +E A ++++M G N+VT+ ++ G+ +G +++A +F
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ + P+ TYT L+ G RL A +++ EM PN VT+ V++ FC+
Sbjct: 449 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
EA L++ M++ P+ ++D + ++ E+A EL L+ PD
Sbjct: 506 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 565
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S+II L +E ++ EA K+F + G P + YN ++ +C+ A + MV
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
G PN TY LI+G KE +L E+ +G
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 11/342 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-- 104
+++ I +Q +D A Q + G + S + +Y +++ L RA ++ + LL E+
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSY--GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
K P + N FI ++ GL E A ++ + + ++ + N L+N R
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLI---EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D +F + PN T L+ LC + ++ A +L EM PN+VT
Sbjct: 441 VDSALELF----YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ + +G ++ A + +++ G P+ TY L+DG K +A++++ + N
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 556
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GV P+ VTY +I + + EA + + P + + K++ LC+ + A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ + ++ CMP+ T+I L E + E + L E
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 178/360 (49%), Gaps = 3/360 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ +F + + N L+++L+ R V +F+ P+V++ N++IK +C+
Sbjct: 36 KASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRV 95
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATT 257
V+ A+ +++ M G P+ VTH ++ G ++ V + G +P+ T
Sbjct: 96 GQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVT 155
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T ++ GY K G+L DA+ V ++M +G+ PN VTY V+I + K G A + M
Sbjct: 156 FTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT 215
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + P +ID C G+++DA +W + + P+ S IIH LCK+ +
Sbjct: 216 RLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSD 275
Query: 378 EAKKLFDEFE-RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA L +E R I P YN +I +C+ ++ EA + M EKG P+ +TY +L
Sbjct: 276 EAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTIL 335
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I G+C E I EM++ GC P+ + + I L ++G EV V+ +A+ S
Sbjct: 336 IIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLASGGAS 395
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 180/370 (48%), Gaps = 12/370 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF-SHNYDTYHSIIHKLARARAFDAV 97
P + LVS LD + + A +F ++ Y+ S + + R R D V
Sbjct: 9 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSL--IGRGRVHDVV 66
Query: 98 ---ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E + + +P++ F VI+ G+ + A++ R+ +F + N
Sbjct: 67 ALFERWIQDRVYSPDVWS----FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNI 122
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L++ L + H + + + +PNV T +I CK +E A+ V ++M +
Sbjct: 123 LVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVAS 182
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G++PN VT+ ++ GY GD+ +A V+ + PD T++ L+DGY + G+L DA
Sbjct: 183 GIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDA 242
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM-LQRKYVPSSALCCKVID 333
+++ +M + ++PN T+ ++I + CK +S EA LL+++ L+ P + + VID
Sbjct: 243 LRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVID 302
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
+LC+ GKV++A + K + K C PD + +I C + +I EA F E E G P
Sbjct: 303 VLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSP 362
Query: 393 SLLTYNTLIA 402
+T N I+
Sbjct: 363 DSITVNCFIS 372
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 12/282 (4%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+ PDA + L+ L + ++ + + G Y ++ + + +
Sbjct: 6 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65
Query: 310 RNLLDDMLQ-RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
L + +Q R Y P VI +C G+V+ A EL +R+ C PD + ++
Sbjct: 66 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125
Query: 369 WLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LC+ ++ ++ +R + P+++T+ ++I+G C++ +L +A +++DMV G+
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PN TYN+LI G+ K+G+ + + ++M C P+ +FS LI+G G + ++
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245
Query: 487 VSMATASGSVESDSWNFLLTRIVSDL------DSGAGALDEL 522
S A ++ + + F + I+ L D G L+EL
Sbjct: 246 WS-DMAQHRIQPNVYTFSI--IIHSLCKQNRSDEAIGLLNEL 284
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 122/296 (41%), Gaps = 37/296 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ ++ L R +L L+++ F +VI Y AG+ E A+ +
Sbjct: 119 THNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVY-- 176
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
N +V + ++PN T N+LI K
Sbjct: 177 -----------------NDMVAS-----------------GIMPNTVTYNVLINGYGKVG 202
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A+ V +M + P++VT ++++ GY G +++A R++ D+ P+ T++
Sbjct: 203 DLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFS 262
Query: 260 VLMDGYIKLGRLTDAVKVMDEME-DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++ K R +A+ +++E+ + P Y +I+ CK K EA + M +
Sbjct: 263 IIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEE 322
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P +I C + ++ +A + ++ C PD+ + I L K G
Sbjct: 323 KGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 378
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 234/540 (43%), Gaps = 114/540 (21%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L +I Q+ ALQ F +A F F+H+ TY ++IHKL R FD V+ LL E+
Sbjct: 41 LCQLILDQKTSSEALQTFRWASTF-SKFTHSQSTYRTLIHKLCIFRRFDTVKQLLDEMPT 99
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ GE++FIT++R AG + KF+ S++ N++L+ LV+ + D
Sbjct: 100 SIGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLVK-EDID 158
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ ++ S + V + +T IL+K LC + + ++L + + G+ PN V + T+
Sbjct: 159 MAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTL 218
Query: 227 LGGYVWRGDIENAKRVFGDILD-------------------------------RGWVPDA 255
L G + A+ + +++D VPD
Sbjct: 219 LHALCRNGKVGRARSLMNEMVDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDV 278
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMD-----------------------------------E 280
T T +++ GR+T+A +V++ +
Sbjct: 279 VTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQ 338
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM----LQRKYVPSSALCCKVIDLLC 336
ME+ G PN TY ++I FC+ + A +L +DM + R +V + I LC
Sbjct: 339 MENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTM----IRGLC 394
Query: 337 EEGKVEDA------CELWKRLLRKNCMPDNAI---------------------------- 362
EG++ED E K + + P N+I
Sbjct: 395 SEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAV 454
Query: 363 --SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
S TII CKEG I +AK ++D+ + G IPS+L YN+L+ G + + EA L ++
Sbjct: 455 DRSMTIIQK-CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINE 513
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ P T+N +I FC+ G + ++ +E++ +GC PN ++S LI+ L G+
Sbjct: 514 MISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGD 573
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 153/320 (47%), Gaps = 36/320 (11%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VP+V T +++ LC V A VL+ + S+G + V + T++ G+ G ++
Sbjct: 274 LVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGL 333
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++G++P+ TY +L+ G+ + L A+ + ++M+ +G+ N VT+ MI
Sbjct: 334 HFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGL 393
Query: 301 CKGKKSGEARNLLDDM----------------------LQRKYVPSSALCCKVIDLL--- 335
C + + ++L+ M Q ++ +S K+ L
Sbjct: 394 CSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRA 453
Query: 336 ----------CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
C+EG +EDA ++ +++ + +P + ++++H + G I EA +L +E
Sbjct: 454 VDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINE 513
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
P T+N +I CE ++ A + +D+ +G PN TY+ LI C+ G+
Sbjct: 514 MISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGD 573
Query: 445 AKEGIRILEEMLDKGCFPNK 464
++ +++ EM++KG P++
Sbjct: 574 IQKALQVFLEMVEKGILPDQ 593
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 144/306 (47%), Gaps = 8/306 (2%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AGR A + R+E + NTL+ + V L F +PNV
Sbjct: 291 AGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVK-VGLHFLKQMENKGYLPNVD 349
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NILI C+ ++ A+ + ++M + G+ N VT T++ G G IE+ + ++
Sbjct: 350 TYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSIL-EL 408
Query: 247 LDR---GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G + Y ++ G K R +A + + +M + P V + I CK
Sbjct: 409 MEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKM--GKLFPRAVDRSMTIIQKCKE 466
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+A+N+ D M+ +PS + ++ + G + +A EL ++ NC P +
Sbjct: 467 GAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTF 526
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ II C++GKI A K ++ RG +P+ TY+ LI +C ++ +A +++ +MVE
Sbjct: 527 NAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVE 586
Query: 423 KGVEPN 428
KG+ P+
Sbjct: 587 KGILPD 592
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 123/279 (44%), Gaps = 36/279 (12%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I+ + G+ ++ + ++E +V + N L+ +++ DL +F + +
Sbjct: 318 TLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTD 377
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM--------------------------- 211
+ N T + +I+ LC + +E +L+ M
Sbjct: 378 -GINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRF 436
Query: 212 -------PSMG-MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
MG + P V + + G IE+AK ++ ++D G +P Y L+
Sbjct: 437 DEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVH 496
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ + G + +AV++++EM N P T+ +I FC+ K A ++D+ R VP
Sbjct: 497 GFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVP 556
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +ID+LC +G ++ A +++ ++ K +PD I
Sbjct: 557 NTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCI 595
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 212/428 (49%), Gaps = 16/428 (3%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE--IKCGENLF 117
ALQ F++A + ++H +Y S++ L R R + + L +++ +K F
Sbjct: 95 ALQFFNWAQEM--GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+++RN+ AG + ++K F ++ V SV + N+LL L++ R ++ ++
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V P+ FT NILI+ C V+ R+ +++ G P++VT+ T++ G G +
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272
Query: 238 NAKRVFGDILDRG--WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V + + P+ TYT L+ GY + A+ V +EM + G++ N +TY
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332
Query: 296 MIEAFCKGKKSGEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I+ C+ +K + +++L+ + P + ++ C G ++DA ++++R+
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FER-------GSIPSLLTYNTLIAGMCE 406
PD+A S ++ LC+ G +A+ L D+ ER G P + YN + +CE
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + +A + + ++ +G + + +Y LI G CK G + G +L ML K P+ +
Sbjct: 453 TGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFET 511
Query: 467 FSLLIEGL 474
+ LI GL
Sbjct: 512 YESLINGL 519
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 41/280 (14%)
Query: 248 DRGWVP-DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
RG V +A + LM + + G +++KV M+ +GV P+ VT+ ++ K ++
Sbjct: 141 SRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRT 200
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A+ + D+ML V PD + +
Sbjct: 201 NMAKKVYDEMLSTYGVT----------------------------------PDTFTFNIL 226
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I C G + + ++F++ R G P ++TYNTL+ G+C + ++T A + M +K V
Sbjct: 227 IRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSV 286
Query: 426 E--PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ PNV TY LI+G+C ++ + + EEM+++G N +++ LI+GL E+ ++
Sbjct: 287 DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346
Query: 484 GKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
++ G+ D+ F + AG LD+ L
Sbjct: 347 KDILEGTAGDGTFSPDTCTF---NTLMHCHCHAGNLDDAL 383
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 11/366 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+++I L AR F+ ++ +L + F T++ + AG + A+K
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKV 385
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVV-----PNVFTCNI 190
F R+ + +Q + + L+ +L Q Y+ L+ K K + P V N
Sbjct: 386 FERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNP 445
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+ K LC+ + A + ++ G + ++ T++ G+ G E+ + +L +
Sbjct: 446 IFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKD 504
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ PD TY L++G + + + A++ +++M + PN T+ ++ + ++ E+
Sbjct: 505 FXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESA 564
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L+ ML + + + + LL G + A +L L K + +I +L
Sbjct: 565 SLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYL 621
Query: 371 CKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C K+ + K L E + NT+I +CE +L+EA L+ +VE GV +
Sbjct: 622 CHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQL 681
Query: 430 FTYNML 435
N L
Sbjct: 682 SCQNQL 687
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 210/400 (52%), Gaps = 8/400 (2%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI 118
LA + F +A K N+ H+ YHS+I LA+ R + V L+ ++ N EI E F
Sbjct: 38 LAYRFFEWASK-QRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMR-NKEILNVE-AFC 94
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++R Y A + E AV TF +EK+N++ +V + N LL+AL ++K +F N + +
Sbjct: 95 IIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQ 154
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F VP+ T +ILI+ + ++ A + EM G +P+ VT++ ++ G ++
Sbjct: 155 F--VPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDE 212
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + ++ P + Y+VL+ Y R+ DAV EME NGV + Y +I
Sbjct: 213 AVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALIS 272
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
AFCK K +L DM + P+S C +I+ L G+ ++A ++++R++ K C P
Sbjct: 273 AFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMI-KVCEP 331
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLW 417
D + II C ++ A K++ ++ +PS+ T++ LI G+C+ T+A L
Sbjct: 332 DVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLL 391
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
++M+EKG+ P+ T+ L K G K+ ++ L+E ++
Sbjct: 392 EEMIEKGIRPSGATFGRLRHLLIKEGR-KDVLKFLQEKMN 430
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 120/253 (47%), Gaps = 2/253 (0%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + ++M Y + ++ +AV + ME ++PN + ++ A CK K +A+ +
Sbjct: 89 NVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIF 148
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M + ++VP S +I+ + A E+++ ++ C+PD S ++ LCK
Sbjct: 149 DNM-KDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKA 207
Query: 374 GKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EA ++ E + + PS Y+ L+ + +A + +M GV +V Y
Sbjct: 208 GRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAY 267
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
N LI FCK K R+L++M KG PN + +++I L G E K+
Sbjct: 268 NALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIK 327
Query: 493 SGSVESDSWNFLL 505
+ DS+ ++
Sbjct: 328 VCEPDVDSYTMII 340
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 14/235 (5%)
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y MIE+ K ++ +L++ M ++ + A C ++ KVE+A + +
Sbjct: 58 AYHSMIESLAKIRQYQMVWDLVNAMRNKEILNVEAFCI-IMRKYARAQKVEEAVYTFNVM 116
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELT 411
+ N P+ A + ++ LCK + +A+++FD + +P TY+ LI G + L
Sbjct: 117 EKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLP 176
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A ++ +M++ G P+ TY++++ CK G E + I++EM C P+ +S+L+
Sbjct: 177 KAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLV 236
Query: 472 EGL-YESGNEGEVGKVVSMATASGSVESDSWNFLLT------------RIVSDLD 513
E+ E V + M + ++N L++ R++ D+D
Sbjct: 237 HTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMD 291
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 228/437 (52%), Gaps = 17/437 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E
Sbjct: 23 KNSEHALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+L++ +I +YG AG + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 81 DLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N+++ VE A R ++M S ++P++VT+ T++ GY
Sbjct: 140 KMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ R P TYT L+ GY+ + R+ DA+++++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+++ P+ +++ ++I C+ G ++ A + K ++R
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI----PSLL-----TYNTLIAGM 404
+ + +I CK G+ +A KL D+ I S L YN LI +
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYL 379
Query: 405 CESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + + +A L +++ GV+ P N LI+G + G+ +L+ ML +
Sbjct: 380 CNNGQTAKAEALVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSE 437
Query: 464 KTSFSLLIEGLYESGNE 480
++S+ L++ Y NE
Sbjct: 438 QSSYDSLVQS-YLKKNE 453
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 222/433 (51%), Gaps = 19/433 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L A+++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C K EAR++L +M+ + P+ +++ ++I C G ++ A ++ K ++R +
Sbjct: 265 LCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L +++ GV+ + N LI+G + G+ +L+ ML + K+++
Sbjct: 383 GQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 468 SLLIEGLYESGNE 480
L++ Y NE
Sbjct: 442 DSLVQS-YLKKNE 453
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 197/423 (46%), Gaps = 11/423 (2%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGE--NLFITVIRNYGLAGRPELA 133
N TY ++ L AR R DA L L + P C ++ ++ G A
Sbjct: 121 NAYTYFPVVRALCARGRIADA----LAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA 176
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILI 192
V+ + V + N +LNA+ D +HL+ F P+V + N ++
Sbjct: 177 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLL--RDLPSFGCEPDVVSYNAVL 234
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K LC +++EM M PN+VT T++ G E V +++ G
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 294
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y ++DG K G L A ++++ M G++PN V Y +++ C ++ E L
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M + ++D C+ G V+ EL +++L + CMPD +T+I+ CK
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCK 414
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG I EA L G P+ ++Y ++ G+C + +A L M+++G N T
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+N LI CK G ++ I +L++ML GC P+ S+S +I+GL ++G E +++++
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 492 ASG 494
G
Sbjct: 535 NKG 537
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 227/455 (49%), Gaps = 13/455 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDAVESLLTEL 104
+++ I Q ++D AL + + P+F D +Y++++ L A+ + V+ L+ E+
Sbjct: 198 VLNAICDQGSVDEALHLL----RDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 253
Query: 105 KQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ + C N+ F T+I G E + ++ + +R T+++ + +
Sbjct: 254 VR---MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKE 310
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
++ H + N + + PNV N L+K LC + E +L EM + VT
Sbjct: 311 GHLEVAHEIL-NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
++ + G ++ + +L+RG +PD TYT +++G+ K G + +AV ++ M
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G +PN ++Y ++++ C ++ +A +L+ M+Q+ + +I+ LC++G VE
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
A EL K++L C PD ST+I L K GK EA +L + +G P+ + Y+++
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ + + + +++D++ + + + YN +I CK G + I L M+ GC
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
PN++++++LI GL G E ++++ + G++
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 160/315 (50%), Gaps = 1/315 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T +++ALC + + A+ VLDEMP G P + IL G +A
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RV D+ RG D ++++ G + +A+ ++ ++ G EP+ V+Y +++
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ G + L+++M++ P+ +I LC G E E+ +++ C PD
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CKEG + A ++ + G P+++ YNTL+ G+C + E L +
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + T+N+L+ FC+ G I +LE+ML++GC P+ +++ +I G + G
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGL 417
Query: 480 EGEVGKVVSMATASG 494
E ++ TA G
Sbjct: 418 IDEAVMLLKSMTACG 432
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 185/412 (44%), Gaps = 10/412 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFL 138
YH I+ R F + +L +L + + G NL + I + G A+
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE---ALHLLR 216
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ F + V S N +L L KR+ V + + + PN+ T N LI LC+
Sbjct: 217 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEE-MVRMACPPNIVTFNTLISYLCRN 275
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
E VL +M G P++ + TI+ G G +E A + + G P+ Y
Sbjct: 276 GLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 335
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ G R + +++ EM D ++VT+ ++++ FC+ LL+ ML+
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 395
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R +P VI+ C+EG +++A L K + C P+ + ++ LC + +
Sbjct: 396 RGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD 455
Query: 379 AKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ L + + P + +T+NTLI +C+ + +A L M+ G P++ +Y+ +I
Sbjct: 456 AEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 515
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G K G E + +L M++KG PN +S + L EG + KV+ M
Sbjct: 516 GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL---SREGRINKVIQM 564
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ GY G +E+A+R+ + P+A TY ++ GR+ DA+ V+DEM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G P Y V++EA C+G A +L+D+ R C V++ +C++G V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
+A L + L C PD + ++ LC + ++L +E R + P+++T+NTLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ +C + + MVE G P++ Y +I G CK G+ + IL M G
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 462 PNKTSFSLLIEGL 474
PN ++ L++GL
Sbjct: 330 PNVVCYNTLLKGL 342
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN ++AG C + +L A RL + V PN +TY +++ C G + + +L+EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSG 515
+GC P + +++E G +V+ A G +++ + N +L I
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQ---- 205
Query: 516 AGALDELL 523
G++DE L
Sbjct: 206 -GSVDEAL 212
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 40/385 (10%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R L + F R + ++ SV S N L++ LV+ + ++K + ++ P + +
Sbjct: 108 RTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRR-RIEPTLISF 166
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE---NAKRVFGD 245
NI+I LCK + A ++++M G+ N++T+ T++ GY G I A + +
Sbjct: 167 NIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKE 226
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI-------- 297
+ G P+ T+ +L+DG+ K ++ A+KV EM GV+PN VTY +I
Sbjct: 227 MRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK 286
Query: 298 ---------------------------EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
FCK K +A L DDM ++ P+
Sbjct: 287 VNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNI 346
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+ID C++ +EDA L++ +L K PD + + +I LC++G + A+ L E +
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406
Query: 391 IPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ + L+TYN LI +C E+ +A RL D+M KG++P+ TYN +I G+CK GN + +
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAAL 466
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL 474
+ +M G N ++++LI+G
Sbjct: 467 NLRSQMEKVGRLANVATYNVLIKGF 491
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 178/349 (51%), Gaps = 7/349 (2%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N +IL+ A K G+ ++ + ++ G V G+I + + V+
Sbjct: 92 NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+++ R P ++ ++++G K+G+L A ++++M+ GV N +TY +I+ +CK
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211
Query: 304 KKSGE---ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K G+ A +L +M P+ +ID C++ V A +++ + R+ P+
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++I+ LC GK+ EA L D+ + P+++T+N L+ G C++ + +AG L+DD
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M ++G+ PNV TYN+LI +CK N ++ + ML KG P+ ++++ LI GL G+
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 480 -EGEVGKVVSMATASGSVESDSWNFLLTRIVS--DLDSGAGALDELLVK 525
E V M T + ++N L+ + + ++ LDE+ K
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK 440
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 177/359 (49%), Gaps = 22/359 (6%)
Query: 75 SHNYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
S N TY+++I K+ + +++L E++ + I E F +I +
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG-ICPNEVTFNILIDGFCKDKNVS 253
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A+K F + + V+ +V + N+L+N L N + + + ++ + PN+ T N L
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL-RDQMVNSCLKPNIITHNAL 312
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ CK V+ A + D+MP G+ PN+ T+ ++ Y ++E+A ++ +L +G
Sbjct: 313 LNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGV 372
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD +TY L+ G + G L A ++ EM+ ++ + +TY ++I++ C + +A
Sbjct: 373 CPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALR 432
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LLD+M ++ PS +ID C+EG + A L ++ + + + A + +I C
Sbjct: 433 LLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFC 492
Query: 372 KEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K+ K+ +A L +E E+G IP+ +TY + ++M+EKG P++
Sbjct: 493 KKDKLEDANGLLNEMLEKGLIPNRMTYEIVT----------------EEMMEKGFVPDI 535
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 183/359 (50%), Gaps = 26/359 (7%)
Query: 141 EKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ +N +V S N ++N L + +K Y L H M PN+ T N +I LC
Sbjct: 131 DGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQG-----FPPNIVTYNSVIDGLC 185
Query: 197 K----------------KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
K K +E A+R+L +M G+ P++VT++ ++ Y G A+
Sbjct: 186 KAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEAR 245
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++ RG PDA TY L+ GY G L D ++ M +G+ + + ++I A+
Sbjct: 246 NIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAY 305
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K + +A +M Q+ + P+ VID+LC+ G+VEDA + +++ + PD
Sbjct: 306 AKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDI 365
Query: 361 AISSTIIHWLCKEGKIWEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++IH LC G+ + +KL F+ RG P+ + NT++ +C+ + EA +D
Sbjct: 366 ITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQ 425
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ GV+P+V +Y +LI G+C G E I++L M+ G P+ ++S L+ G ++G
Sbjct: 426 IIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNG 484
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 223/478 (46%), Gaps = 27/478 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L +++ +F++ +D A +FH F N TY+S+I L +A+A D E
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEM--LGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194
Query: 99 SLLTELKQNPEIKCGENL---------------FITVIRNYGLAGRPELAVKTFLRIEKF 143
++L ++ +++ L + +I Y GR A F + +
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254
Query: 144 NVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ TLL+ +DL+ LM ++ + +VF NILI+A K +
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDG---IPLEDHVF--NILIRAYAKNE 309
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A+ EM G PN+VT+TT++ G +E+A F ++ G PD T+T
Sbjct: 310 TLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFT 369
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G +G K+ EM + G+ PN + ++++ CK + EA + D ++
Sbjct: 370 SLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHV 429
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +ID C +GK++++ +L R++ PDN S +++ CK G++ +A
Sbjct: 430 GVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDA 489
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L+ E F + P+ +TYN ++ G+ + + A + +V+ G++ + TYN+++ G
Sbjct: 490 LALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGG 549
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
C+ E +R+ + + K +F+++I GL + G G+ + S SG V
Sbjct: 550 LCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLV 607
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 163/371 (43%), Gaps = 45/371 (12%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELK 105
L+ + + LD A+ F FS N TY ++I L +A R DAV +
Sbjct: 301 LIRAYAKNETLDKAMTAF--IEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358
Query: 106 Q--NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ +P+I F ++I G + K + + + LNT++++L +
Sbjct: 359 EGLSPDIIT----FTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEG 414
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
R H F H V P+V + ILI C ++ +I++L M S+G+ P+ VT+
Sbjct: 415 RVLEAHDFFDQIIH-VGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTY 473
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+ +L GY G +++A ++ ++ + P+A TY +++ G GR+ A + ++ D
Sbjct: 474 SALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVD 533
Query: 284 NGVEPNEVTYGVMIEAFC------------KGKKS-----------------------GE 308
+G++ TY +++ C +G +S G+
Sbjct: 534 SGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGD 593
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A++L +L VP + + +I EEG +E++ EL+ + + C ++ + I+
Sbjct: 594 AKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVR 653
Query: 369 WLCKEGKIWEA 379
L ++G + A
Sbjct: 654 KLLEKGDVRRA 664
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 46/253 (18%)
Query: 274 AVKVMDEMEDNGVE---PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
AV + + M GV + T+G++I FC LLD L+ + S A
Sbjct: 75 AVSLFNTMAQVGVNKLATDACTFGILIRCFCN-------VGLLDFALEEESRGSRA---- 123
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
+ ++ ++G NC P+ + +I+ L KEG++ +A LF E +G
Sbjct: 124 AVHMMADDG--------------YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQG 169
Query: 390 SIPSLLTYNTLIAGMCES----------------AELTEAGRLWDDMVEKGVEPNVFTYN 433
P+++TYN++I G+C++ +L EA RL M G++P+V TY+
Sbjct: 170 FPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYS 229
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+LI +CKIG E I + M+ +G P+ ++ L+ G G ++ ++++
Sbjct: 230 LLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQD 289
Query: 494 G-SVESDSWNFLL 505
G +E +N L+
Sbjct: 290 GIPLEDHVFNILI 302
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 34/255 (13%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD---------- 166
+ +I Y L G+ + ++K R+ ++ + + LLN +N R D
Sbjct: 438 YTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF 497
Query: 167 -------------LVHLMFKNSR------HKFKVVPN-----VFTCNILIKALCKKDDVE 202
++H +F R K+V + + T NI++ LC+ V+
Sbjct: 498 SKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVD 557
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+R+ + S + T ++ G + G I +AK +F IL G VPDA Y +++
Sbjct: 558 EALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMI 617
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+I+ G L ++ ++ ME NG N T ++ + A L + +++Y
Sbjct: 618 QSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYS 677
Query: 323 PSSALCCKVIDLLCE 337
++ +I ++ E
Sbjct: 678 VEASTAVLLISIVSE 692
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 176/337 (52%), Gaps = 12/337 (3%)
Query: 148 SVRSLNTLLNALVQNKRYDLV-----HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
S+ LLN + + K++D+V HL H +++TCN+L+ C+
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH------DLYTCNLLMNCFCQSSQPY 124
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A L +M +G P++VT T+++ G+ +E A + +++ G PD YT ++
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K G + A+ + D+ME+ G+ P+ V Y ++ C + +A +LL M +RK
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +ID +EGK DA EL+ ++R + P+ +++I+ C EG + EA+++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F E +G P ++ Y +LI G C+ ++ +A +++ +M +KG+ N TY LIQGF +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G + M+ +G PN ++++L+ L +G
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 167/340 (49%), Gaps = 6/340 (1%)
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L++L N+ DL M ++ + +P++ L+ + K + I + D + MG
Sbjct: 48 LHSLQFNEALDLFTHMVES-----RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ +L T ++ + A G ++ G+ PD T+T L++G+ R+ +A+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++++M + G++P+ V Y +I++ CK A +L D M P + +++ L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C G+ DA L + + ++ PD + +I KEGK +A++L++E R SI P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
TY +LI G C + EA +++ M KG P+V Y LI GFCK + ++I E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
M KG N +++ LI+G + G +V S + G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 202/443 (45%), Gaps = 45/443 (10%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRNYGLAGRPELAVKTFL 138
+ +++ +A+ + FD V +L L+ + +L+ ++ + + +P LA
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQI---MGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++ K + + + +L+N R + M N + + P+V +I +LCK
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV-NQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A+ + D+M + G+ P++V +T+++ G G +A + + R PD T+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+D ++K G+ DA ++ +EM + PN TY +I FC EAR + M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +I+ C+ KV+DA +++ + +K + +T+I + GK
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK---GVEPNVFTYNM 434
A+++F RG P++ TYN L+ +C + ++ +A +++DM ++ GV PN++TYN+
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 435 LI-----------------------------------QGFCKIGNAKEGIRILEEMLDKG 459
L+ QG CK G K + + + KG
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 460 CFPNKTSFSLLIEGLYESGNEGE 482
PN +++ +I GL+ G + E
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHE 513
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 196/391 (50%), Gaps = 8/391 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + T+ S+I+ + S++ ++ + IK ++ T+I + G A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ F ++E + ++ V +L+N L + R+ D L+ ++ K K P+V T N LI
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK--PDVITFNALI 254
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
A K+ A + +EM M + PN+ T+T+++ G+ G ++ A+++F + +G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD YT L++G+ K ++ DA+K+ EM G+ N +TY +I+ F + K A+ +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK---NCMPDNAISSTIIHW 369
M+ R P+ ++ LC GKV+ A +++ + ++ P+ + ++H
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIA-GMCESAELTEAGRLWDDMVEKGVEPN 428
LC GK+ +A +F++ + + + T+I GMC++ ++ A L+ + KGV+PN
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
V TY +I G + G E + +M + G
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 5/314 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y S+++ L + + +SLL + + +IK F +I + G+ A + + +
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ ++ ++ + +L+N D MF K P+V LI CK
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKK 332
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A+++ EM G+ N +T+TT++ G+ G A+ VF ++ RG P+ TY V
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 261 LMDGYIKLGRLTDAVKVMDEM---EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ G++ A+ + ++M E +GV PN TY V++ C K +A + +DM
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+R+ +I +C+ GKV++A L+ L K P+ +T+I L +EG
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 378 EAKKLFDEFERGSI 391
EA LF + + +
Sbjct: 513 EAHVLFRKMKEDGV 526
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 211/447 (47%), Gaps = 38/447 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++++ R DA L+ + P+ + +IR GR A+ +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
Q SV + LL A+ ++ + + R K PN+ T N++I +C++
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGR 230
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A L+ + S G P+ V++TT+L G E+ + +F +++++ +P+ T+ +
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + + G + A++V+++M +G N ++I CK + +A L++M
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + V+ LC + EDA EL K ++RKNC P+ +T I LC++G I +A
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 381 KLFDEFE--------------------RGSI-------------PSLLTYNTLIAGMCES 407
L ++ +G + P+ +TY TL+ G+C +
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNA 470
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L +M++K PNV T+N+L+ FC+ G E I ++E+M++ GC PN ++
Sbjct: 471 ERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITY 530
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ L++G+ N E +++ ++G
Sbjct: 531 NTLLDGITNDCNSEEALELLHGLVSNG 557
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 199/416 (47%), Gaps = 11/416 (2%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L +IRN GR A + E+ V + NTL+ + + D + +
Sbjct: 80 LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIAS- 138
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+ +T +I+ LC + V A+ +LD+M G P++VT+T +L
Sbjct: 139 ---MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V ++ +G P+ TY V+++G + GR+ DA + ++ + G +P+ V+Y
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C K+ + L +M+++ +P+ ++ C G VE A ++ +++
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C + + + +I+ +CK+G++ +A + + G P ++Y T++ G+C + +A
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +MV K PN T+N I C+ G ++ ++E+M + GC N +++ L+ G
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 475 YESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G + + SM ++ ++ LLT + + LD+ A L E+L K+C
Sbjct: 436 CVQGRVDSALELFYSMPCKPNTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDC 488
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 151/293 (51%), Gaps = 4/293 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+ C LI+ LC++ A RVL G ++ + T++ GY G ++ A+R+
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ PDA TYT ++ G GR+ +A+ ++D+M G +P+ VTY V++EA CK
Sbjct: 136 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
G+A +LD+M + P+ +I+ +C EG+V+DA E RL PD
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 363 SSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ LC + + ++LF E E+ +P+ +T++ L+ C + A ++ + M
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G N N++I CK G + + L M GC P+ S++ +++GL
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 188/395 (47%), Gaps = 10/395 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++ + ++ F +L E++ C N+ + +I GR + A +
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAREFL 238
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ + Q S T+L L KR++ V +F K +PN T ++L++ C+
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDMLVRFFCR 297
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
VE AI+VL++M G N ++ +G +++A + ++ G PD +
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT ++ G + R DA +++ EM PNEVT+ I C+ +A L++ M
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + +++ C +G+V+ A EL+ + C P+ +T++ LC ++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +L E ++ P+++T+N L++ C+ + EA L + M+E G PN+ TYN L+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
G N++E + +L ++ G P+ ++S +I
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 169/343 (49%), Gaps = 7/343 (2%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N ++ L +DD+ A R++D S G P++ T ++ RG +A RV
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G D Y L+ GY + G+L A +++ M V P+ TY +I C + GE
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +LLDDML R PS +++ +C+ A E+ + K C P+ + II+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+C+EG++ +A++ + G P ++Y T++ G+C + + L+ +M+EK P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N T++ML++ FC+ G + I++LE+M GC N T +++I + + G + + +
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343
Query: 488 -SMATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKNC 527
+M + S ++ S+ +L + + L E++ KNC
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 198/429 (46%), Gaps = 8/429 (1%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + R+ +D A + + + F + +Y +++ L A+ ++ VE L E+ +
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ E F ++R + G E A++ ++ + N ++N + + R D
Sbjct: 279 KNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
F N+ + P+ + ++K LC+ + E A +L EM PN VT T
Sbjct: 338 DA-FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +G IE A + + + G + TY L++G+ GR+ A+++ M
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---C 453
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+PN +TY ++ C ++ A LL +MLQ+ P+ ++ C++G +++A E
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
L ++++ C P+ +T++ + + EA +L G P ++TY+++I +
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ EA +++ + + G+ P YN ++ CK N I M+ GC PN+
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633
Query: 466 SFSLLIEGL 474
++ LIEGL
Sbjct: 634 TYITLIEGL 642
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 174/397 (43%), Gaps = 10/397 (2%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRN 123
+A N N T+ ++ R VE + L+Q C N + VI
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRG---GMVERAIQVLEQMSGHGCAANTTLCNIVINT 329
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
GR + A + + + S T+L L + +R++ + K K P
Sbjct: 330 ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPP 388
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N T N I LC+K +E A ++++M G N+VT+ ++ G+ +G +++A +F
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ + P+ TYT L+ G RL A +++ EM PN VT+ V++ FC+
Sbjct: 449 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
EA L++ M++ P+ ++D + + E+A EL L+ PD
Sbjct: 506 GLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTY 565
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
S+II L +E ++ EA K+F + G P + YN ++ +C+ A + MV
Sbjct: 566 SSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVS 625
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
G PN TY LI+G KE +L E+ +G
Sbjct: 626 NGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 151/342 (44%), Gaps = 11/342 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-- 104
+++ I +Q +D A Q + G + S + +Y +++ L RA ++ + LL E+
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSY--GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
K P + N FI ++ GL E A ++ + + ++ + N L+N R
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLI---EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D +F + PN T L+ LC + ++ A +L EM PN+VT
Sbjct: 441 VDSALELF----YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ + +G ++ A + +++ G P+ TY L+DG +A++++ + N
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSN 556
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GV P+ VTY +I + + EA + + P + + K++ LC+ + A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ + ++ CMP+ T+I L E + E + L E
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 225/436 (51%), Gaps = 15/436 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + HN + + II L RA + +L ++ + ++ E
Sbjct: 23 KNAEHALQFFRWVERSNL-LEHNREIHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
++++ +I +YG AG + +VK F ++E+ V+R+++S + L + + RY + F N
Sbjct: 81 DMWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N+LI VE A R ++M S + P+++T+ T++ GY
Sbjct: 140 KMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ +R P TYT L+ GY + R+ DA+++++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI---------PSLLTYNTLIAGM 404
+ + +I + CK G+ +A KL D+ I L YN LI +
Sbjct: 320 LSVPTEAGHYGVLIEYYCKAGQYDKAVKLLDKLIEKDIILRPQSTLHMELSAYNPLIEYL 379
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + + +A L +++ GV+ + + N LI+G + G+ +L+ ML + K
Sbjct: 380 CNNGQTAKAETLVRQLMKLGVQ-DPTSLNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEK 438
Query: 465 TSFSLLIEGLYESGNE 480
+++ L++ Y NE
Sbjct: 439 SAYDSLVQS-YLKKNE 453
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 187/359 (52%), Gaps = 3/359 (0%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+++ I +++ G+ A FL++ K F + S+ + N+L++ L++ + ++ +F
Sbjct: 752 DSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLF 811
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
++ P+VFT N+ + AL K ++ + +EM G PN +TH ++ G V
Sbjct: 812 YKMKNA-GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ A ++ D++ + P TY L+DG +KLGRL +A + +EM D G PN
Sbjct: 871 SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +++ F K A L M++ P ++D LC GKV+DA ++ L
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELT 411
PD + +I+ L + ++ EA LFDE RG P L TYN LI + + +
Sbjct: 991 LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EAG++++++ KG+EPNVFTYN LI+G GN + ++M+ GC PN +F+ L
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 192/388 (49%), Gaps = 12/388 (3%)
Query: 75 SHNYD--TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGR 129
SH D TY +++ K + DA++ +E++ + P++ F +I G+
Sbjct: 327 SHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVT----FTILIDALCKVGK 382
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ A T ++K V ++ + NTL+ L++ R D +F NS + +T
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF-NSMESLGLETTAYTYI 441
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+ I K + AI+ ++M + G+VPN+V L +G +E AK F +
Sbjct: 442 LFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC 501
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PDA TY +LM Y K GR+ DA+K++ EME+NG +P V +I+ K + EA
Sbjct: 502 GLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEA 561
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+ M + K P+ ++ L +EG+V++A L+K ++ +C P+ +T++
Sbjct: 562 WKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDC 621
Query: 370 LCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK G++ A K LF E P +LTYNT+I G+ + + A L+ M +K + P+
Sbjct: 622 LCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPD 680
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEML 456
T L+ G K G ++ R+ +E +
Sbjct: 681 YVTLCTLLPGVIKDGRIEDAFRVAKEFV 708
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 191/406 (47%), Gaps = 15/406 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ L + R + V LL E++ P I F IR G AG+ + A
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYT----FTICIRILGRAGKIDEAYGI 284
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF---KNSRHKFKVVPNVFTCNILIK 193
R++ V + L++AL + + +F K S HK P+ T L+
Sbjct: 285 LKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHK----PDRVTYITLLD 340
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
D++ EM + G +P++VT T ++ G ++ A + +G P
Sbjct: 341 KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAP 400
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TY L+ G ++L RL +A+++ + ME G+E TY + I+ + K +SG+A
Sbjct: 401 NLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTF 460
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ M VP+ C + L E+G++E+A E + L + PD + ++ K
Sbjct: 461 EKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKA 520
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ +A KL E E G P ++ N+LI + ++ + EA +++ M E + P V TY
Sbjct: 521 GRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTY 580
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
N L+ G K G +E + + M+ C PN SF+ L++ L ++G
Sbjct: 581 NTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNG 626
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
K D ++ K ++ F + P++ N LI L K E A + +M + G P++
Sbjct: 765 HGKAVDAYNVFLKLTK-SFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T+ L G I+ ++ ++L RG P+ T+ +++ G +K L A+ + +
Sbjct: 824 FTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
+ P TYG +I+ K + EA+ ++ML +P+ L +++ ++G
Sbjct: 884 LMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD 943
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNT 399
VE ACEL++R++++ PD S ++ LC GK+ +A F+E + G P L+ YN
Sbjct: 944 VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+I G+ S + EA L+D+M +G+ P+++TYN LI G +E ++ EE+ KG
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063
Query: 460 CFPNKTSFSLLIEGLYESGN 479
PN +++ LI G SGN
Sbjct: 1064 LEPNVFTYNALIRGHSMSGN 1083
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 206/448 (45%), Gaps = 56/448 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ ++ +A D LL+E+++N PE+ +L T+ + A R + A K
Sbjct: 509 TYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYK----ADRVDEAWKM 564
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F R+++ + +V + NTLL L + R +FK PN + N L+ LC
Sbjct: 565 FQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIAD-DCPPNTISFNTLLDCLC 623
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +V+ A+++L M M P+++T+ T++ G + + A +F + + PD
Sbjct: 624 KNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ-MKKVIYPDYV 682
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEM------EDNGVEPNEVTYGVMIEA----------- 299
T L+ G IK GR+ DA +V E +G ++ G++IEA
Sbjct: 683 TLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAES 742
Query: 300 -------------------FCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEG 339
CK K+ +A N+ + + + PS +ID L +
Sbjct: 743 LVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKAR 802
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE----RGSIPSLL 395
E A L+ ++ C PD + + L K GKI K+LFD +E RG P+ +
Sbjct: 803 LTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKI---KELFDLYEEMLFRGCKPNTI 859
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
T+N +I G+ +S L +A L+ D++ P +TY LI G K+G +E + EEM
Sbjct: 860 THNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEM 919
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEV 483
LD GC PN +++L+ G G +G+V
Sbjct: 920 LDYGCMPNCPLYNILMNGF---GKQGDV 944
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 175/359 (48%), Gaps = 10/359 (2%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM-FKNSRHKFKVVPNVFTCNIL 191
A+K + R+ ++ S+++ + L+ AL KR D+ +M + PN++T I
Sbjct: 211 ALKVYRRMVSEGIKPSLKTYSALMVAL--GKRRDIETVMGLLQEMESLGLRPNIYTFTIC 268
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I+ L + ++ A +L M G P++VT+T ++ G + NAK +F +
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY L+D + G L + EME +G P+ VT+ ++I+A CK K EA
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFG 388
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LD M ++ P+ +I L ++++A EL+ + + + T I ++
Sbjct: 389 TLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSM---ESLGLETTAYTYILFID 445
Query: 372 KEGKIWEAKKLFDEFER----GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
GK E+ K FE+ G +P+++ N + + E L EA ++ + + G+ P
Sbjct: 446 YYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAP 505
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ TYN+L++ + K G + I++L EM + GC P + LI+ LY++ E K+
Sbjct: 506 DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKM 564
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T +LI ALC + A + +M + P+ VT+ T+L + GD++ K
Sbjct: 295 PDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEF 354
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ ++ G++PD T+T+L+D K+G++ +A +D M+ GV PN TY +I +
Sbjct: 355 WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA L + M ++ ID + G+ A + ++++ +P+
Sbjct: 415 LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA 474
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++ L ++G++ EAK+ F+ ++ G P +TYN L+ ++ + +A +L +M
Sbjct: 475 CNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME 534
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
E G +P V N LI K E ++ + M + P +++ L+ GL G EG
Sbjct: 535 ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGL---GKEG 591
Query: 482 EVGKVVSM 489
V + ++
Sbjct: 592 RVQEATAL 599
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMP-SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L+K LCK A V ++ S + P+L + +++ G + E A +F + +
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD TY + +D K G++ + + +EM G +PN +T+ ++I K +A
Sbjct: 818 GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L D++ + P+ +ID L + G++E+A + ++ +L CMP+ + + +++
Sbjct: 878 IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
K+G + A +LF + I P L +Y+ ++ +C ++ +A ++++ G++P+
Sbjct: 938 FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ YN++I G + +E + + +EM ++G P+ +++ LI L +G E GK+
Sbjct: 998 LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKM 1055
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 160/356 (44%), Gaps = 8/356 (2%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V + + N +L L ++R + + ++F N K + ++ T + K L + + A
Sbjct: 118 VIHTTETCNYVLEMLRAHRRVEDMVVVF-NLMQKQIIKRSINTYLTIFKVLYIRGGLREA 176
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
L++M +G V N ++ ++ + G A +V+ ++ G P TY+ LM
Sbjct: 177 PVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALM-- 234
Query: 265 YIKLGRLTDAVKVM---DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ LG+ D VM EME G+ PN T+ + I + K EA +L M
Sbjct: 235 -VALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGC 293
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
P +ID LC GK+ +A EL+ ++ + PD T++ G + K+
Sbjct: 294 GPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKE 353
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ E E G +P ++T+ LI +C+ ++ EA D M ++GV PN+ TYN LI G
Sbjct: 354 FWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLL 413
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ E + + M G ++ L I+ +SG G+ K +G V
Sbjct: 414 RLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIV 469
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 239/541 (44%), Gaps = 91/541 (16%)
Query: 43 YPKRLVSMIFRQQNL--DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+ L++ I R+ L + L+IF+ A K F +Y Y ++H L+RAR + +S
Sbjct: 68 FSDELLNSILRRLRLNPEACLEIFNLASK-QQKFRPDYKAYCKMVHILSRARNYQQTKSY 126
Query: 101 LTEL---------------KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
L EL + E +F +++ Y G + A+ F + +
Sbjct: 127 LCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGR 186
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD------ 199
S+ S N+LL+ LV+ K + V L + F+V P+VFTC+I++ A C+
Sbjct: 187 IPSLLSCNSLLSNLVR-KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM 245
Query: 200 ------------------------------DVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
DVEG RVL M G+ N+VT+T+++ G
Sbjct: 246 VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKG 305
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV--- 286
Y +G +E A+ VF + ++ V D Y VLMDGY + G++ DAV+V D M + GV
Sbjct: 306 YCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTN 365
Query: 287 --------------------------------EPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+P+ TY +++ +C+ EA L D
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCD 425
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M Q++ VP+ ++ G D LWK +L++ D ST++ L K G
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
EA KL++ RG + +T N +I+G+C+ ++ EA + D++ +P V TY
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
L G+ K+GN KE + E M KG FP ++ LI G ++ + +V +V A
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 494 G 494
G
Sbjct: 606 G 606
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 208/464 (44%), Gaps = 50/464 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
++ TY++++ RA D L ++ Q E+ + +++ Y G A
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQK-EVVPTVMTYNILLKGYSRIG----AFHD 454
Query: 137 FLRIEKFNVQRSVR----SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
L + K ++R V S +TLL AL + ++ +++N + ++ + T N++I
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR-GLLTDTITLNVMI 513
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + V A +LD + P + T+ + GY G+++ A V + +G
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P Y L+ G K L ++ E+ G+ P TYG +I +C +A
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL-------------------- 352
+M+++ + +C K+ + L K+++AC L ++++
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 353 ------------------RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IP 392
+K +P+N + + I LCK GK+ +A+KLF + IP
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
TY LI G + ++ +A L D+M KG+ PN+ TYN LI+G CK+GN R+L
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ KG PN +++ LI+GL +SGN E ++ G V
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 10/433 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V+ R N+D A+ +F + N TY+S+I+ A VE + L+
Sbjct: 231 VVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYA---MIGDVEGMTRVLRL 286
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
E N+ + ++I+ Y G E A F +++ + L++ + +
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 165 Y-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D V + ++ + V N CN LI CK + A ++ M + P+ T+
Sbjct: 347 IRDAVRV--HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T++ GY G ++ A ++ + + VP TY +L+ GY ++G D + + M
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
GV +E++ ++EA K EA L +++L R + + +I LC+ KV +
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
A E+ + C P + H K G + EA + + ER G P++ YNTLI+
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G + L + L ++ +G+ P V TY LI G+C IG + EM++KG
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 463 NKTSFSLLIEGLY 475
N S + L+
Sbjct: 645 NVNICSKIANSLF 657
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL-DEMPSMGMVPNLVTHTTILGGYV 231
+NS K +VPN N+ I LCK +E A ++ D + S +P+ T+T ++ G
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
GDI A + ++ +G +P+ TY L+ G KLG + A +++ ++ G+ PN +
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
TY +I+ K EA L + M+++ V S
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 224/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNLMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ ++A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQASKAETLVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 209/463 (45%), Gaps = 61/463 (13%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY---DLVHLMF 172
+F ++I Y +G A K ++ Q N L+ + N++ D++ L
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430
Query: 173 KNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
K VV N + L + LC E A ++ EM S G +P+ T++ ++G
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
++NA +F ++ VPD TYT+L+D + K+G L A K DEM +G PN
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
VTY +I A+ K +K A L + ML +P+ +ID C+ G++E AC+++ R
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 351 LLRKNCMPD---------------NAIS-STIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
+ +PD N + ++ LCK K+ EA+ L D G P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML------------------ 435
+ Y+ LI G C+ +L EA ++ M E+G PNV+TY+ L
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730
Query: 436 -----------------IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I G CK+G E R++ M +KGC PN +++ +I+G G
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGF---G 787
Query: 479 NEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G+V K + + G+ + + NF+ R++ + AG LD+
Sbjct: 788 KAGKVDKCLELMRQMGA-KGCAPNFVTYRVLINHCCAAGLLDD 829
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 30/403 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY ++IH +AR + L + C N+ + +I + +G+ E A
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSE---GCIPNVVTYTALIDGHCKSGQIEKAC 605
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + R+ NA + + V + FK + PN+FT L+
Sbjct: 606 QIYARMRG--------------NADIPD-----VDMYFKIDDGNIRD-PNIFTYGALVDG 645
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK V+ A +LD M G PN + + ++ G+ G ++ A+ VF + +RG+ P+
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY+ L+D K RL A+KV+ M +N PN + Y MI+ CK K+ EA L+
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M ++ P+ +ID + GKV+ EL +++ K C P+ +I+ C G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825
Query: 375 KIWEAKKLFDEFERGSIPSLLT-YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ +A +L DE ++ P + Y +I G + E + L D++ E P + Y
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYR 883
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCF--PNKTSFSLLIEGL 474
+LI FCK G + + + +EM + +K +S LIE L
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESL 926
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 214/496 (43%), Gaps = 67/496 (13%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
++ + ++L +V ++ +N +L ++ F +AG+ + H YH+++ L
Sbjct: 120 LRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGR-QIGYGHTGPVYHALLEVLGCGGND 178
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E L E++ + G+ L +IR G +A++ R++ + S + N
Sbjct: 179 RVPEQFLREIRDEDKEILGK-LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNA 237
Query: 155 LLNALVQNKRYD-----------------------LVHLMFKNSR----------HKFKV 181
L+ ++ R D VHL+ K R +FK+
Sbjct: 238 LVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL 297
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
++T +I LC+ E A+ L M S +PN+VT+ +L G + + + KR
Sbjct: 298 DTVIYT--QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ G P + L+ Y + G + A K++ +M D G +P V Y ++I C
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+K +PS +D+L E A + + +L + + +
Sbjct: 416 GNEK----------------LPS-------LDVL------ELAEKAYGEMLDAHVVLNKV 446
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S + LC GK +A + E +G IP TY+ +I +C ++++ A L+++M
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V P+VFTY +LI FCK+G ++ + +EM+ GC PN +++ LI ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566
Query: 481 GEVGKVVSMATASGSV 496
++ M + G +
Sbjct: 567 SSANELFEMMLSEGCI 582
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 171/382 (44%), Gaps = 30/382 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY +++ L +A LL + C N ++ +I + G+ + A
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVE---GCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL----VHLMFKNSRHKFKVVPNVFTCNI 190
F ++ + +V + ++L++ L ++KR DL + M +NS PNV
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS-----CAPNVIIYTE 746
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LCK + A R++ M G PN+VT+T ++ G+ G ++ + + +G
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TY VL++ G L DA +++DEM+ + Y +IE F ++ +
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISL 864
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTI 366
LLD++ + VP +ID C+ G++E A EL K + +C D + S++
Sbjct: 865 GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSL 922
Query: 367 IHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD------- 418
I L K+ +A +L+ D +RG IP L + L+ G+ EA +L D
Sbjct: 923 IESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMMV 982
Query: 419 DMVEKGVEPNVFTYNMLIQGFC 440
D V +G + Y L C
Sbjct: 983 DFVREGFLGSSHDYEFLNWTLC 1004
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 245/541 (45%), Gaps = 52/541 (9%)
Query: 9 ITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAG 68
+T+ + ++Q + S I+ + P+ + L + +I+ Q N AL F++A
Sbjct: 21 VTSITSVIQRLNPQNPSPKNIS-SQPLDQFSLCLGSNIVTKVIYEQTNPYHALFFFNWAS 79
Query: 69 KFHPN---FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT-VIRNY 124
+PN + H Y +I L SLL K + ++ + FI+ +I+ Y
Sbjct: 80 NPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLL---KNSNKL---SDFFISKLIKAY 133
Query: 125 GLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN 184
G G + A+ F + ++ + S N+LL LV+ L F + V P+
Sbjct: 134 GDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPD 193
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
V T +I+ CK +E A +V D M + PNL+ + T++ G+ +GD+E+A+ VF
Sbjct: 194 VSTYTTMIRGYCKMGMIENAKKVFD---VMTVKPNLLAYNTMINGFCKKGDMESARLVFD 250
Query: 245 DILD-RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ +P+ TYT L+DGY K G L +A K M+EM + G PNE+TY MI C
Sbjct: 251 RMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCIN 310
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ EA+ L+ M + + + ++ LC GK + A + ++ N PD
Sbjct: 311 GRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSY 370
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RG--------------------------------- 389
+I+ CK GK EA L E RG
Sbjct: 371 EVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 430
Query: 390 --SIPSLLTYNTLIAGMCES-AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+P+ ++YNT+I G+C + + + L D M+ G + Y+ L++G+C+ GN +
Sbjct: 431 MDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVE 490
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
++I EM+ K SFS+L++ L G E K+ + +V+ DS+ +L
Sbjct: 491 NVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLFDTCSRCPAVDVDSYRRVLD 550
Query: 507 R 507
+
Sbjct: 551 Q 551
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 196/423 (46%), Gaps = 11/423 (2%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGE--NLFITVIRNYGLAGRPELA 133
N TY ++ L AR R DA L L + P C ++ ++ G A
Sbjct: 158 NAYTYFPVVRALCARGRIADA----LAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA 213
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILI 192
V+ + V + N +LNA+ D +HL+ F P+V + N ++
Sbjct: 214 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLL--RDLPSFGCEPDVVSYNAVL 271
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K LC +++EM M PN+VT T++ G E V +++ G
Sbjct: 272 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 331
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y ++DG K G L A ++++ M G++PN V Y +++ C ++ E L
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 391
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M + ++D C+ G V+ EL +++L CMPD +T+I+ CK
Sbjct: 392 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 451
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG I EA L G P+ ++Y ++ G+C + +A L M+++G N T
Sbjct: 452 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 511
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+N LI CK G ++ I +L++ML GC P+ S+S +I+GL ++G E +++++
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 492 ASG 494
G
Sbjct: 572 NKG 574
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 226/455 (49%), Gaps = 13/455 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDAVESLLTEL 104
+++ I Q ++D AL + + P+F D +Y++++ L A+ + V+ L+ E+
Sbjct: 235 VLNAICDQGSVDEALHLL----RDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 290
Query: 105 KQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ + C N+ F T+I G E + ++ + +R T+++ + +
Sbjct: 291 VR---MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKE 347
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
++ H + N + + PNV N L+K LC + E +L EM + VT
Sbjct: 348 GHLEVAHEIL-NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 406
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
++ + G ++ + +L+ G +PD TYT +++G+ K G + +AV ++ M
Sbjct: 407 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 466
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G +PN ++Y ++++ C ++ +A +L+ M+Q+ + +I+ LC++G VE
Sbjct: 467 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 526
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
A EL K++L C PD ST+I L K GK EA +L + +G P+ + Y+++
Sbjct: 527 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 586
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ + + + +++D++ + + + YN +I CK G + I L M+ GC
Sbjct: 587 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 646
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
PN++++++LI GL G E ++++ + G++
Sbjct: 647 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 159/315 (50%), Gaps = 1/315 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T +++ALC + + A+ VLDEMP G P + IL G +A
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RV D+ RG D ++++ G + +A+ ++ ++ G EP+ V+Y +++
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ G + L+++M++ P+ +I LC G E E+ +++ C PD
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CKEG + A ++ + G P+++ YNTL+ G+C + E L +
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 394
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + T+N+L+ FC+ G I +LE+ML+ GC P+ +++ +I G + G
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL 454
Query: 480 EGEVGKVVSMATASG 494
E ++ TA G
Sbjct: 455 IDEAVMLLKSMTACG 469
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 184/412 (44%), Gaps = 10/412 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFL 138
YH I+ R F + +L +L + + G NL + I + G A+
Sbjct: 197 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE---ALHLLR 253
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ F + V S N +L L KR+ V + + + PN+ T N LI LC+
Sbjct: 254 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV-RMACPPNIVTFNTLISYLCRN 312
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
E VL +M G P++ + TI+ G G +E A + + G P+ Y
Sbjct: 313 GLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 372
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ G R + +++ EM D ++VT+ ++++ FC+ LL+ ML+
Sbjct: 373 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 432
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+P VI+ C+EG +++A L K + C P+ + ++ LC + +
Sbjct: 433 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD 492
Query: 379 AKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ L + + P + +T+NTLI +C+ + +A L M+ G P++ +Y+ +I
Sbjct: 493 AEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 552
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G K G E + +L M++KG PN +S + L EG + KV+ M
Sbjct: 553 GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL---SREGRINKVIQM 601
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ GY G +E+A+R+ + P+A TY ++ GR+ DA+ V+DEM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G P Y V++EA C+G A +L+D+ R C V++ +C++G V+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
+A L + L C PD + ++ LC + ++L +E R + P+++T+NTLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ +C + + MVE G P++ Y +I G CK G+ + IL M G
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 462 PNKTSFSLLIEGL 474
PN ++ L++GL
Sbjct: 367 PNVVCYNTLLKGL 379
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN ++AG C + +L A RL + V PN +TY +++ C G + + +L+EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSG 515
+GC P + +++E G +V+ A G +++ + N +L I
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQ---- 242
Query: 516 AGALDELL 523
G++DE L
Sbjct: 243 -GSVDEAL 249
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 217/460 (47%), Gaps = 69/460 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
T++ +I L + DA L E+ PE C N F ++R Y AG + ++
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEM---PEKGCKPNEFTFGILVRGYCKAGLTDKGLELL 205
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+E F V + NT++++ + R D + + R + +VP++ T N I ALCK
Sbjct: 206 NSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREE-GLVPDIVTFNSRISALCK 264
Query: 198 KDDVEGAIRVLDEMP---SMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDI------- 246
+ V A R+ +M +G+ PN +T+ +L G+ G +E+AK +F I
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLV 324
Query: 247 ----------------------------LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+D+G P +Y +LMDG KLG L+DA ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
M+ NGV P+ VTYG ++ +C K A++LL +M++ +P++ C ++ L
Sbjct: 385 GLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNM 444
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK----------------- 381
G++ +A EL +++ K D + I+ LC G++ +A +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 382 -----LFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
L D+ E +P L+TY+TL+ G+C++ EA L+ +M+ + ++P+ YN+
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNI 564
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I FCK G R+L++M KGC + +++ LI GL
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 174/342 (50%), Gaps = 7/342 (2%)
Query: 144 NVQRS-VRSLNTLLNALVQNKRYDLVHLMFKNSRHKF-KVVPNVFTCNILIKALCKKDDV 201
++Q++ + SL ++++ ++ D F+ R +F + P ++ N+L+++ ++ V
Sbjct: 69 SIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRV 128
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
E + +M G+ P T ++ ++ A+ +F ++ ++G P+ T+ +L
Sbjct: 129 EFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGIL 188
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ GY K G +++++ ME GV PN+V Y ++ +FC+ ++ ++ L++ M +
Sbjct: 189 VRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGL 248
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTIIHWLCKEGKIW 377
VP I LC+EGKV DA ++ + + P++ + ++ CK G +
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+AK LF+ E + SL +YN + G+ + EA + M++KG+ P++++YN+L+
Sbjct: 309 DAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILM 368
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G CK+G + I+ M G P+ ++ L+ G G
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVG 410
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 38/404 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++ Y G+ + A + + N + + N LL++L R + + K
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKG 461
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM----------------------- 216
+ V TCNI++ LC +++ AI ++ M G
Sbjct: 462 YGLDTV-TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+P+L+T++T+L G G AK +F +++ PD+ Y + + + K G+++ A +
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFR 580
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V+ +ME G + TY +I + E L+D+M ++ P+ I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLC 640
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-----ERGSI 391
E GKVEDA L +++KN P+ +I CK A+++F+ ++ +
Sbjct: 641 EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
SL+ +N L+A + +L +A L + ++++G E F Y L+ CK + I
Sbjct: 701 YSLM-FNELLA----AGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGI 755
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG----KVVSMAT 491
L +M+DKG + + +I+GL + GN+ E K++ MA+
Sbjct: 756 LHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMAS 799
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P T+N LI +C+S+ + A L+D+M EKG +PN FT+ +L++G+CK G +G
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +L M G PNK ++ ++ G + K+V G V
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLV 249
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
E +VE L+K ++ P+ + +I LC + A++LFDE E+G P+ T
Sbjct: 125 ERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 397 YNTLIAGMCESAELTEAG-RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+ L+ G C+ A LT+ G L + M GV PN YN ++ FC+ G + +++E+M
Sbjct: 185 FGILVRGYCK-AGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKM 243
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
++G P+ +F+ I L + G + ++ S
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 165/294 (56%), Gaps = 5/294 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P V T L++ LC+ + A +L +P + N+V T++GG + G + A
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATE 332
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ + +G PDA TY++LM G KLGR++ AV+++ EME G PN VTY +++ +FC
Sbjct: 333 LYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFC 392
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + R LL++M + +S +I LC++G++++A L + + + C PD
Sbjct: 393 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 452
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+TII+ LC ++ EA+ +F+ E G + + +TYNT+I + +A RL +M
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G +V +YN LI+ CK GN + +LEEM +KG PN S+++LI L
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 171/331 (51%), Gaps = 5/331 (1%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
+F VQ S RS N +L+ L + + +++ H+ +V P FT + +ALC+
Sbjct: 132 RFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
A+ +L M G VP+ V + T++ +G + A + ++L G D T+ +
Sbjct: 192 NEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ G LGR+ +A +++D M G P +TYG +++ C+ +++ EAR +L + +
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV 311
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
V L VI EGK+ +A EL++ + K C PD S ++H LCK G+I A +
Sbjct: 312 V----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVR 367
Query: 382 LFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L E E +G P+++TY ++ C++ + L ++M KG+ N YN +I C
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
K G E + +++EM +GC P+ S++ +I
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTII 458
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 156/290 (53%), Gaps = 1/290 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T +IL+ LCK + A+R+L EM G PN+VT+T +L + G ++ + +
Sbjct: 344 PDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 403
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ +G ++ Y ++ K GR+ +A+ ++ EM G P+ +Y +I C
Sbjct: 404 LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCN 463
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA ++ +++L+ V + +I L +G+ +DA L K ++ C D
Sbjct: 464 NEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVS 523
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I +CK+G + + L +E E+G P+ ++YN LI+ +C+ + +A L M+
Sbjct: 524 YNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML 583
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+G+ P++ TYN LI G CK+G + +LE++ ++ P+ ++++LI
Sbjct: 584 NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 163/321 (50%), Gaps = 5/321 (1%)
Query: 102 TELKQNPEIK-CGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
TEL + +K C + I +GL GR AV+ +EK +V + +L++
Sbjct: 331 TELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHS 390
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+N +D + + K + N N +I ALCK ++ A+ ++ EM S G P
Sbjct: 391 FCKNGMWDDTRALLEEMSAK-GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 449
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++ ++ TI+ +E A+ +F ++L+ G V + TY ++ ++ GR DAV++
Sbjct: 450 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 509
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM +G + V+Y +I+A CK + LL++M ++ P++ +I LC+E
Sbjct: 510 KEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKE 569
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+V DA EL K++L + PD +T+I+ LCK G + A L ++ ++ P ++TY
Sbjct: 570 RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 629
Query: 398 NTLIAGMCESAELTEAGRLWD 418
N LI+ C+ L +A L +
Sbjct: 630 NILISWHCKVRLLDDAAMLLN 650
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 2/283 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ N TY ++H + +D +LL E+ + + +I GR + A
Sbjct: 377 FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK-GLTLNSQGYNGMIYALCKDGRMDEA 435
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + S NT++ L N++ + MF+N + VV N T N +I
Sbjct: 436 MGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE-GVVANGITYNTIIH 494
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
AL + + A+R+ EM G ++V++ ++ G+++ + + ++ ++G P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ +Y +L+ K R+ DA+++ +M + G+ P+ VTY +I CK A NLL
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ + P +I C+ ++DA L R + C
Sbjct: 615 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 201/416 (48%), Gaps = 18/416 (4%)
Query: 66 YAGKFHPNFSHNYDTYHSIIH------KLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
YA + N T++ +I+ KL +A+ F + + IK + T
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG-------IKPTIVTYNT 265
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+++ + L GR E A ++ Q +++ N +L+ + R V K +
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMK----EI 321
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+VP+ + NILI+ D+E A DEM GMVP T+ T++ G IE A
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ + +I ++G V D+ TY +L++GY + G A + DEM +G++P + TY +I
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K+ EA L + ++ + P + ++D C G ++ A L K + + PD
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWD 418
+ + ++ LC EGK EA++L E +R I P ++YNTLI+G + + A + D
Sbjct: 502 DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD 561
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+M+ G P + TYN L++G K + +L EM +G PN +SF +IE +
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 199/384 (51%), Gaps = 10/384 (2%)
Query: 135 KTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K FL I E F ++ ++ + NTL+ R + L+ + K P++ T N ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK-GFQPDMQTYNPILS 303
Query: 194 ALCKKDDVEG-AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+C EG A VL EM +G+VP+ V++ ++ G GD+E A +++ +G V
Sbjct: 304 WMCN----EGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TY L+ G ++ A ++ E+ + G+ + VTY ++I +C+ + +A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
D+M+ P+ +I +LC + K +A EL+++++ K PD + +T++ C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + A L E + SI P +TYN L+ G+C + EA L +M +G++P+ +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG-KVVSMA 490
YN LI G+ K G+ K + +EML G P +++ L++GL ++ EGE+ +++
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN-QEGELAEELLREM 598
Query: 491 TASGSVESDSWNFLLTRIVSDLDS 514
+ G V +DS + +S+LD+
Sbjct: 599 KSEGIVPNDSSFCSVIEAMSNLDA 622
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 172/339 (50%), Gaps = 7/339 (2%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F ++ ++ NV+T NI+I LCK+ ++ A L M G+ P +VT+ T++ G+
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
RG IE A+ + ++ +G+ PD TY ++ GR A +V+ EM++ G+ P+
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDS 327
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
V+Y ++I A D+M+++ VP+ +I L E K+E A L +
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAE 409
+ K + D+ + +I+ C+ G +A L DE I P+ TY +LI +C +
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
EA L++ +V KG++P++ N L+ G C IGN +L+EM P+ +++
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLT 506
L+ GL G E +++ G ++ D S+N L++
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRG-IKPDHISYNTLIS 545
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+ + +++ C+ + EA M ++ + P + C ++ LL ++E+A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAE 409
+ R + + +I+ LCKEGK+ +AK E I P+++TYNTL+ G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A + +M KG +P++ TYN ++ C G A E +L EM + G P+ S+++
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNI 332
Query: 470 LIEGLYESGN 479
LI G +G+
Sbjct: 333 LIRGCSNNGD 342
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 214/458 (46%), Gaps = 11/458 (2%)
Query: 56 NLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
N+D+A + FH A P+ +Y S+I L +A E L +++ + C
Sbjct: 264 NVDMAWKFFHELKAQGLKPDDV----SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA 319
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T+I YG AGR E A K R+ + SV S N++L L + ++ D +F+
Sbjct: 320 -YAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 378
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ + PN T NI+I LC VE A R+LDEM + PNL+T ++
Sbjct: 379 VMKKDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 436
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
+E A ++F RG PD TY L+DG K G++ +A ++ ++M D G N V Y
Sbjct: 437 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 496
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I F + + + ++++R P L +D + + G+VE +++ +
Sbjct: 497 TSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 556
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+PD S +IH L K G+ E +F ++G YN ++ G C+S ++ +
Sbjct: 557 YGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHK 616
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A + ++M EK V+P V TY ++ G KI E + EE KG N +S LI+
Sbjct: 617 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 676
Query: 473 GLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIV 509
G + G E ++ G + +WN LL +V
Sbjct: 677 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 714
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 212/463 (45%), Gaps = 40/463 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+++SI+ L + R D SL +K++ E + + +I L GR E A +
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPN--SSTYNIIIDMLCLGGRVEEAYRILDE 413
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ ++ ++N +++ L + ++ + + +F+++ + P+ T LI L KK
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR-GCNPDCVTYCSLIDGLGKKG 472
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A R+ ++M G N V +T+++ + G E+ ++F +++ RG PD T
Sbjct: 473 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 532
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
MD K G + + +++ G P+ +Y ++I K ++ E N+ M Q+
Sbjct: 533 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 592
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ + V+D C+ GKV A E+ + + K P A I+ L K ++ EA
Sbjct: 593 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 652
Query: 380 KKLFDE------------------------------------FERGSIPSLLTYNTLIAG 403
LF+E ++G P++ T+N+L+
Sbjct: 653 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 712
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ ++ E+ EA + M E PN +TY++LI G C++ + ++M +G PN
Sbjct: 713 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 772
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+++ +I GL + GN + + A+G + ++ S+N L+
Sbjct: 773 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 815
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 212/418 (50%), Gaps = 24/418 (5%)
Query: 79 DTYHSII----HKLARARAFDAVESLLTELK----QNPEIKCGENLFITVIRNYGLAGRP 130
D YH+++ H LA A+E +L E+ P C +L ++R A R
Sbjct: 112 DAYHAVLPFLHHDLA------ALEKVLEEMAVLGYGLPNQACA-HLAAALVR----ARRL 160
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCN 189
+ AV + + + + + L+ AL + +R + + L+ + ++V ++FT
Sbjct: 161 DDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT-- 218
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L++AL ++ V A+ ++DE+ + P++V + + + G+++ A + F ++ +
Sbjct: 219 TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ 278
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD +YT ++ K GRL +A ++ +ME P Y MI + + +A
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 338
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LL+ + +R +PS ++ L ++ KV++A L++ +++K+ P+++ + II
Sbjct: 339 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIIIDM 397
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC G++ EA ++ DE E S+ P+LLT N ++ +C++ +L EA ++++ ++G P+
Sbjct: 398 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 457
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
TY LI G K G E R+ E+MLD G N ++ LI + G + + K+
Sbjct: 458 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI 515
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 212/445 (47%), Gaps = 13/445 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P L +V + + + L+ A +IF A + N + TY S+I L + D
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN--PDCVTYCSLIDGLGKKGQVDEA 477
Query: 98 ESLLTELKQNPEIKCGEN----LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
L ++ + G N ++ ++IRN+ + GR E K F + + + + LN
Sbjct: 478 YRLFEKM-----LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 532
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
T ++ + + + ++F++ R + +P+V + +ILI L K + M
Sbjct: 533 TYMDCVFKAGEVEKGRMIFEDIR-SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 591
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G + + ++ G+ G + A + ++ ++ P TY ++DG K+ RL +
Sbjct: 592 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 651
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A + +E + G+E N V Y +I+ F K + EA +L++M+++ P+ ++D
Sbjct: 652 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 711
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIP 392
L + ++ +A ++ + C P+ S +I+ LC+ K +A + + ++ G +P
Sbjct: 712 ALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP 771
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+++TY T+I+G+ + +T+A L++ G P+ ++N LI+G A E ++
Sbjct: 772 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVF 831
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYES 477
EE +GC N S L++ L +S
Sbjct: 832 EETRLRGCRINIKSCISLLDALNKS 856
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 196/420 (46%), Gaps = 9/420 (2%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLA 127
H + N T + ++ +L +AR + + Q NP+ + ++I G
Sbjct: 416 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT----YCSLIDGLGKK 471
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A + F ++ + +L+ + R + H +FK + P++
Sbjct: 472 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR-GCKPDLTL 530
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N + + K +VE + +++ S G +P++ +++ ++ G G +F +
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+G+ DA Y ++DG+ K G++ A ++++EM++ V+P TYG +++ K +
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L ++ + + L +ID + G++++A + + +++K P+ ++++
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L K +I EA F E P+ TY+ LI G+C + +A W DM ++G+
Sbjct: 711 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 770
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PNV TY +I G K+GN + + E G P+ SF+ LIEG+ + E +V
Sbjct: 771 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQV 830
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 10/285 (3%)
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--- 119
IFH + F+ + Y++++ ++ +L E+K+ KC + T
Sbjct: 585 IFHAMKQ--QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE----KCVQPTVATYGA 638
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++ R + A F + ++ +V ++L++ + R D +L+ + K
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK- 697
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ PNV+T N L+ AL K +++ A+ M M PN T++ ++ G A
Sbjct: 698 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 757
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ D+ +G VP+ TYT ++ G K+G +TDA + + + NG P+ ++ +IE
Sbjct: 758 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 817
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
++ EA + ++ R + C ++D L + +E A
Sbjct: 818 MSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 276 KVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
KV++EM G PN+ + A + ++ +A + M + K+ P+ + +I
Sbjct: 130 KVLEEMAVLGYGLPNQAC-AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL 394
L E + E A EL +++ + +T++ L +EG++ +A L DE
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE--------- 239
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ G C +EP++ YN+ I F K GN + E
Sbjct: 240 ------VKGSC-------------------LEPDIVLYNVCIDCFGKAGNVDMAWKFFHE 274
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +G P+ S++ +I L ++G GE ++ + A SV
Sbjct: 275 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV 316
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 224/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ ++A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQASKAETLVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 191/387 (49%), Gaps = 4/387 (1%)
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
IK + + T+I G A+K +I+ + +V NT+++AL + + +
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+F K + +V T LI C ++ AI +L+EM + PN+ T+ ++
Sbjct: 220 GLFSEMTAK-GISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ AK V +L PD TY+ LMDGY + L A V + M GV P+
Sbjct: 279 LCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+Y ++I FCK K EA NL +M Q+ VP +ID LC+ G++ +L
Sbjct: 339 VHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398
Query: 350 RLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+R +P N I+ +++I LCK G + A LF++ ++G P T+ L+ G+C+
Sbjct: 399 E-MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L +A + D++ KG +V+ YN++I G CK G +E + +L +M + GC PN +F
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
++I L++ + K++ G
Sbjct: 518 DIIINALFKKDENDKAEKLLRQMICRG 544
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 168/348 (48%), Gaps = 4/348 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNIL 191
AV F R+ + N +L++ + K Y + + R + K + P++ T NIL
Sbjct: 43 AVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSL--SHRLELKGIQPDLITLNIL 100
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I C + VL ++ G P+ +T TT++ G +G + A +L +G
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
D +Y L++G K+G A+K++ +++ +PN Y +I+A CK + EA
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M + +I C K+++A L ++ K P+ + ++ LC
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280
Query: 372 KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEGK+ EAK + + + P ++TY+TL+ G EL +A +++ M GV P+V
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+Y +LI GFCK E + + +EM K P ++S LI+GL +SG
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 193/390 (49%), Gaps = 20/390 (5%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+I+ L G+ A+ ++ ++ S TL+N + + ++R
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK----------IGDTR 181
Query: 177 HKFKVV---------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
K+V PNV N +I ALCK V A + EM + G+ ++VT+TT++
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ ++ A + +++ + P+ TY +L+D K G++ +A V+ M V+
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVK 301
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ +TY +++ + + +A+++ + M P +I+ C+ V++A L
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNL 361
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCE 406
+K + +KN +P S++I LCK G+I L DE IP+ ++TYN+LI G+C+
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCK 421
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ L A L++ M ++G+ P FT+ +L+ G CK G K+ +++L KG +
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYK 481
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++++I G + G E ++S +G V
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEENGCV 511
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++++A F +L P + ++D + K+ + AV + +E G++P+ +T
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I FC + ++L +L+R Y P + +I LC +G+V A +LL +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
D T+I+ +CK G A KL + + R + P++ YNT+I +C+ ++EA
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ +M KG+ +V TY LI GFC KE I +L EM+ K PN ++++L++
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 474 LYESGNEGEVGKVVSM 489
L + G E V+++
Sbjct: 279 LCKEGKVKEAKNVLAV 294
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 174/354 (49%), Gaps = 11/354 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N + Y++II L + + L +E+ I + T+I + +A + + A+
Sbjct: 198 NVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG-ISADVVTYTTLIYGFCIASKLKEAIGL 256
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + +V + N L++AL + + +++ +M K V P+V T + L+
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKAC-----VKPDVITYSTLM 311
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+++ A V + M MG+ P++ ++T ++ G+ ++ A +F ++ + V
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TY+ L+DG K GR++ ++DEM D G+ N +TY +I+ CK A L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIAL 431
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M + P S ++D LC+ G+++DA E ++ LL K D + +I+ CK
Sbjct: 432 FNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCK 491
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+G + EA + + E G +P+ +T++ +I + + E +A +L M+ +G+
Sbjct: 492 QGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 4/222 (1%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+A + + ML ++ P K++D + A L RL K PD + +I
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 368 HWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ C G+I + L +RG P +T+ TLI G+C ++ +A D ++ +G++
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ +Y LI G CKIG+ + I+++ ++ + PN ++ +I+ L + E +
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 221
Query: 487 VSMATASG-SVESDSWNFLLTR--IVSDLDSGAGALDELLVK 525
S TA G S + ++ L+ I S L G L+E+++K
Sbjct: 222 FSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 198/385 (51%), Gaps = 4/385 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R +NL + Q F K P F H+ ++YH ++ L ++ F + L E++++ + +
Sbjct: 83 RCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEI 142
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+F V R Y A P A++ F R+ +F ++ ++ L+ LL L + K +F
Sbjct: 143 SPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIF 202
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+H+F+ ++ IL++ + A +V DEM +++ + ++L +
Sbjct: 203 DRVKHQFQTRAKTYS--ILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCK 260
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + A ++F ++ G PDA T+++ + Y + + A +V+DEM+ + PN T
Sbjct: 261 GGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFT 320
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y MI+ CK +K EA LL+++++R P + ++ CE +V A L R++
Sbjct: 321 YNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMV 380
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC-ESAEL 410
+ NC+PD + ++ L + G+ A ++++ E+G PS+ TY+ ++ G+C + +L
Sbjct: 381 KDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKL 440
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNML 435
EA + ++ M+++G+ P T +L
Sbjct: 441 EEACKYFEMMIDEGIPPYSSTVEIL 465
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 15/387 (3%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLV--HLMFKNSRHKFKVVPNVFTCNILIKALC 196
RI F+ S S + L++ L +K++ L+ L+ F++ P VF ++ +A
Sbjct: 100 RIPGFD--HSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFW--LVFRAYS 155
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + AIR D M G+ P + +L R ++A+++F D + + A
Sbjct: 156 RANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIF-DRVKHQFQTRAK 214
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY++L+ G+ +G A KV DEM + + + Y ++EAFCKG K EA + +M
Sbjct: 215 TYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREM 274
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P + I CE + A + + R + +P+ + +I LCK+ K+
Sbjct: 275 GSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKV 334
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA +L +E ER P +YN ++A CE +E+ A RL MV+ P+ +YNML
Sbjct: 335 EEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNML 394
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL-YESGNEGEVGKVVSMATASG 494
++ ++G I + E M +KG +P+ +++S+++ GL + G E K M G
Sbjct: 395 LKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEG 454
Query: 495 -SVESDSWNFLLTRIVSDLDSGAGALD 520
S + L R++ G G LD
Sbjct: 455 IPPYSSTVEILRNRLI-----GLGLLD 476
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 98/234 (41%), Gaps = 37/234 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y+S++ + + E+ N IK F IR Y A LA +
Sbjct: 250 AYNSLLEAFCKGGKVSEAYKMFREMGSNG-IKPDACTFSIFIRAYCEANDIHLAYRVLDE 308
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRH------------------ 177
++++++ +V + N ++ L + ++ Y L++ + + S
Sbjct: 309 MKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSE 368
Query: 178 ------------KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
K +P+ + N+L+K L + + AI V + M G P++ T++
Sbjct: 369 VNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSV 428
Query: 226 ILGGYVWR-GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++ G + G +E A + F ++D G P ++T +L + I LG L D ++++
Sbjct: 429 MVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIGLG-LLDYIEIL 481
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 187/367 (50%), Gaps = 2/367 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV +F R+ N +L++LV+NKRY V +FK + P++ T +ILI
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPN-GITPDLCTLSILI 103
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C + A V + G PN +T T++ G + G+I+ A ++ +G+
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
D +Y L++G K G +++ ++E + V+P+ V Y +I CK K G+A +L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P+ +I C G +++A L + KN PD + +I L K
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EGKI EA LF+E + + P+++TY +LI G+C++ L A L M E+G++PNV++
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYS 343
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y +L+ CK G + + + +L KG N +++++I GL ++G G+V + S
Sbjct: 344 YTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKME 403
Query: 492 ASGSVES 498
G + +
Sbjct: 404 GKGCMPN 410
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+T NILI AL K+ ++ A+ + +EM M PN+VT+T+++ G +E A +
Sbjct: 269 PDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIAL 328
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ ++G P+ +YT+L+D K GRL +A + + G N TY VMI CK
Sbjct: 329 CKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCK 388
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
G+ +L M + +P++ +I L E+ + + A + + ++ +
Sbjct: 389 AGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIAR 440
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 192/366 (52%), Gaps = 6/366 (1%)
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
P + C + T+I + G + + FL ++ + V + +++++ + R++
Sbjct: 236 PNLVC----YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+F N V PNV T N+LI ALCK +E A +L M G P+ T+ T++
Sbjct: 292 AKGLF-NEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ G I++A+ +F + +G DA +Y VL++GY K GR+ +A K+ EM +
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM 410
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P +TY ++ + K +A NL +M P S ++D LC+ + +A EL
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCE 406
+ L + P I + +I LCK KI A++LF+ G P+++TY +I G+C+
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
S +L A L+ M EKG PN+ T+N L++GFC+ ++ + +L+EM +K P+ ++
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST 590
Query: 467 FSLLIE 472
S++++
Sbjct: 591 ISIVVD 596
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 164/310 (52%), Gaps = 4/310 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+V + +I +C EGA + +EM G+ PN+VT ++ G +E A
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ RG PD TY L+DG+ GR+ DA + ME G+E + V+Y V+I +
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + EA+ L +M+ ++ +P+ ++ L EGKV DA L+ + + P++
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPES 448
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ ++ LCK + EA +LF E PS+ +N LI G+C++ ++ A L++
Sbjct: 449 CTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNR 508
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ +G+EPNV TY ++I G CK G + + M +KGC PN +F+ L+ G ++
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN-- 566
Query: 480 EGEVGKVVSM 489
E+ KVV +
Sbjct: 567 -DEMQKVVEL 575
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 178/366 (48%), Gaps = 11/366 (3%)
Query: 149 VRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+ S NTLL A+ + KRY D++ L + S + P+ T NILI C + V+ + V
Sbjct: 92 ISSFNTLLGAVAKIKRYFDVISLYKRMSL--IGLAPDFITLNILINCYCNLNKVDFGLAV 149
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L EM G PN VT T+++ G I A + ++ G+ P+ TY L++G
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCM 209
Query: 268 LGRLTDAVKVMDEM-EDNG-----VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
G AVK+ +EM NG ++PN V Y +I++ CK + + L +M R
Sbjct: 210 TGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGI 269
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
P +I +C G+ E A L+ ++ + P+ + +I LCK GK+ EA
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329
Query: 382 LFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L +RG P TYNTLI G C + +A L+ M KG+E + +YN+LI G+C
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESD 499
K G E ++ EM+ K P +++ L+ GL+ G + + M + ES
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449
Query: 500 SWNFLL 505
++N LL
Sbjct: 450 TYNILL 455
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 7/312 (2%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P + + N L+ A+ K I + M +G+ P+ +T ++ Y ++
Sbjct: 89 TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA 148
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
V G++L RG P+ T+T L+ G R+++A ++ +M G PN VTYG ++ C
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208
Query: 302 KGKKSGEARNLLDDMLQRK------YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ A L ++ML P+ C +ID LC++G ++ EL+ + +
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD S+IIH +C G+ AK LF+E + G P+++T+N LI +C++ ++ EA
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L M+++G P+ FTYN LI GFC G + + M KG + S+++LI G
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388
Query: 475 YESGNEGEVGKV 486
+SG E K+
Sbjct: 389 CKSGRMVEAKKL 400
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 17/400 (4%)
Query: 68 GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNY 124
G F N Y +II L + D + L E+K +P++ + ++I
Sbjct: 228 GGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVA----YSSIIHGM 283
Query: 125 GLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFK 180
GR E A F + V +V + N L++AL + + + L+ LM +
Sbjct: 284 CHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGES--- 340
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
P+ FT N LI C + ++ A + M S G+ + V++ ++ GY G + AK
Sbjct: 341 --PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAK 398
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+++ +++ + +P TY L+ G + G++ DA + EM+ + + P TY ++++
Sbjct: 399 KLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGL 458
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK EA L + + PS + +ID LC+ K+E A EL+ RL + P+
Sbjct: 459 CKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNV 518
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +IH LCK G++ AK LF E +G P+L+T+NTL+ G C++ E+ + L +
Sbjct: 519 ITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQE 578
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
M EK P+ T ++++ K +E + +L +G
Sbjct: 579 MAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 157/337 (46%), Gaps = 47/337 (13%)
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
P G + N + + G++ R + A VF ++D P +++ L+ K+ R
Sbjct: 53 PDRGQLENFLK-SNCKSGHIKRSE---AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRY 108
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
D + + M G+ P+ +T ++I +C K +L +ML+R + P++ +
Sbjct: 109 FDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSL 168
Query: 332 IDLLCEEGKVEDACELWKRLLRKN---------------CMPDNAISS------------ 364
+ LC ++ +A L ++++R CM N + +
Sbjct: 169 VKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNG 228
Query: 365 --------------TIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAE 409
TII LCK+G I + K+LF E + RG P ++ Y+++I GMC +
Sbjct: 229 GFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGR 288
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
A L+++MV++GV PNV T+N+LI CK G +E +L+ M+ +G P+ +++
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNT 348
Query: 470 LIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLL 505
LI+G G + + VSM + ++ S+N L+
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLI 385
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 25/462 (5%)
Query: 32 TPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH----YAGKFHPN-FSHNYDTYHSIIH 86
TPP WP+ L L ++ +++ AL IF A P+ + + T +
Sbjct: 7 TPP--KWPKTLTADHLHRLVRAERDPRRALAIFDGATAAASTSAPDPITPSLATVSLLTS 64
Query: 87 KLARARAFDAVESLLTELKQN-PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FN 144
+LA A SLL+ + P + E F+ ++R + RP A+ F
Sbjct: 65 RLASAGHLPLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLA 124
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK--KDDVE 202
+ S RS N +L ALV + L + + R P T N+L+KA C +E
Sbjct: 125 LPHSARSYNAVLAALVAHSHLPLARSLLADMR-AAGFAPTAATYNVLLKAHCSDAAAHIE 183
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+R+ +P P++ ++ TI+ G RG + A +F +++ + P TYT ++
Sbjct: 184 DALRLFRNIPK----PDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVI 239
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ G DA+K+ EM GV PN VTY +I+ CKG ++ A LLD M++ K +
Sbjct: 240 HWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKL 299
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ VID LC+E + +A E+ R+ + PD + +I LC G+ EA
Sbjct: 300 PNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANY 359
Query: 383 FDEFERGSI-PSLLTY-------NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
DE I P+ +T+ NT++ +C+ EL A +++ + + + T+++
Sbjct: 360 LDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHL 419
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
L++ F K N ++ R++ +ML + C P + ++ ++I G +
Sbjct: 420 LVESFSK-NNIEKAARVVLDMLSERCIPERETWDVIISGYWS 460
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 7/233 (3%)
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
A +Y ++ + L A ++ +M G P TY V+++A C S A ++ D
Sbjct: 129 ARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAHC----SDAAAHIED 184
Query: 315 DMLQRKYVPSSALCC--KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ + +P +C +ID LC G++ +A +++ ++ K P +T+IHWL +
Sbjct: 185 ALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAR 244
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG +A K+F E RG P+L+TY++LI G+C+ T A L D M+++ PN+ T
Sbjct: 245 EGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMIT 304
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
Y+ +I G CK E + IL+ M +G P+ F LI GL ++G E
Sbjct: 305 YSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAA 357
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++IH LAR FD + E+ + NL + ++I GR A++
Sbjct: 234 TYTTVIHWLAREGCFDDALKIFHEMGRR---GVSPNLVTYSSLIDGLCKGGRATSALELL 290
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ K ++ + +++++ L + + R + + P+ LI LC
Sbjct: 291 DRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRK-PDAGLFGKLIVGLCD 349
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVT-------HTTILGGYVWRGDIENAKRVFGDILDRG 250
A LDEM G+ PN VT + T+L +G++ A +V+ R
Sbjct: 350 AGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRS 409
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK-SGEA 309
D TT+ +L++ + K + A +V+ +M P T+ V+I + KK EA
Sbjct: 410 ISTDPTTFHLLVESFSK-NNIEKAARVVLDMLSERCIPERETWDVIISGYWSKKKVRQEA 468
Query: 310 RNLLDDM 316
+ + D +
Sbjct: 469 KEIWDHI 475
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 235/464 (50%), Gaps = 17/464 (3%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE--IKCGENLF 117
AL+ F + + FSH ++Y ++ L R R + + L ++++ + +K + F
Sbjct: 94 ALRFFKWTQQ--KGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFF 151
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
++IR+Y AG + ++K F ++ V SV + N+L++ L++ R ++ ++
Sbjct: 152 NSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLG 211
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ V P+ T N+LI+ CK V+ R EM S ++VT+ T++ G G +
Sbjct: 212 TYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVR 271
Query: 238 NAKRVFGDILDR--GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A+ + + + G P+ TYT L+ GY + +A+ V++EM G++PN +TY
Sbjct: 272 IARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNT 331
Query: 296 MIEAFCKGKKSGEARNLLDDMLQR-KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ C+ K + +++L+ M + P + +I L C G +++A ++++ + +
Sbjct: 332 LVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKF 391
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FER-------GSIPSLLTYNTLIAGMCE 406
D+A ST+I LC++G A++LFDE FE+ GS P +YN + +CE
Sbjct: 392 RIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCE 451
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A R+ ++++G + + +Y +I G CK G + G +L ML + P+
Sbjct: 452 HGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEI 510
Query: 467 FSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIV 509
+ LI+G + + + M +S ++ +W+ +L +++
Sbjct: 511 YDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLL 554
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 181/401 (45%), Gaps = 15/401 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++++ L A D ++ +L +K + F T+I + AG + A+K
Sbjct: 325 NMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKV 384
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK------FKVVPNVFTCNI 190
F ++KF + S +TL+ +L Q YD+ +F K F P + N
Sbjct: 385 FESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNP 444
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+ ++LC+ + A RV+ ++ G + ++TT++ G+ G E+ + +L R
Sbjct: 445 IFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRD 503
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
++PD Y L+DG+++ + A + +++M + +P T+ ++ + + E+
Sbjct: 504 FLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESS 563
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
++ ML++ + L + + LL + E A E+ LL KN + +L
Sbjct: 564 CVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIIN-LLYKNGYYVKI--EEVAQFL 620
Query: 371 CKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K GK+ EA K L E + N I +C+ +++EA L ++VE G+ +
Sbjct: 621 LKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQEL 680
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEM--LD--KGCFPNKTS 466
+ LI + G +E I + + LD G PN ++
Sbjct: 681 TCLDDLIAALEEGGKREEAAFISKRLPRLDNLNGSMPNHST 721
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 188/450 (41%), Gaps = 50/450 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ-----NPEIKCGENLFITVIRNYGLAGRPELAV 134
TY++++ L RA +L+ + + NP + + T+IR Y + E A+
Sbjct: 256 TYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVT----YTTLIRGYCMKQEVEEAL 311
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ ++ ++ + NTL+ L + + D + + + + P+ FT N +I
Sbjct: 312 VVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHL 371
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR----- 249
C +++ A++V + M + + +++T++ +GD + A+++F ++ ++
Sbjct: 372 HCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLS 431
Query: 250 --GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P A +Y + + + G+ A +V+ ++ G + + +Y +I CK
Sbjct: 432 KFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVIMGHCKEGAYE 490
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
LL ML+R ++P + +ID ++ K A E +++L+ + P + +++
Sbjct: 491 SGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVL 550
Query: 368 HWLCKEGKIWEA-----------------------KKLF--DEFERG-SIPSLLTYNTLI 401
L ++G E+ + LF ++ ER I +LL N
Sbjct: 551 AKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYY 610
Query: 402 AGMCESAE-------LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ E A+ L+EA +L +E ++ N I CKI E + E
Sbjct: 611 VKIEEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYE 670
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+++ G T LI L E G E
Sbjct: 671 LVENGLHQELTCLDDLIAALEEGGKREEAA 700
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 161/297 (54%), Gaps = 1/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T N+++ +C++ V+ AI L +PS G PN V++ +L G E+A+ +
Sbjct: 25 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 84
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
G++ +G P+ T+ +L+ + G + A++V++++ G PN ++Y ++ AFCK
Sbjct: 85 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 144
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
KK +A LD M+ R P ++ LC G+V+ A EL +L K C P
Sbjct: 145 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 204
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I L K GK EA +L +E +G P ++TY+T+ AG+C + +A R + +
Sbjct: 205 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 264
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G+ PN YN +I G CK I + M+ GC PN++++++LIEGL G
Sbjct: 265 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 321
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 13/318 (4%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKT 136
TY+ +++ + + R DA+E L K P C N + V++ A R E A +
Sbjct: 29 TYNVVVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 84
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--LMFKNSRHKFKVVPNVFTCNILIKA 194
+ + +V + N L++ L R LV L K+ PN + N L+ A
Sbjct: 85 MGEMGQKGCPPNVVTFNMLISFLC---RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 141
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK+ ++ A+ LD M S G P++V++ T+L G+++ A + + D+G P
Sbjct: 142 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 201
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+Y ++DG K G+ +A+++++EM G++P+ +TY + C+ + +A
Sbjct: 202 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 261
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P++ L +I LC+ + A +L+ ++ CMP+ + + +I L EG
Sbjct: 262 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 321
Query: 375 KIWEAKKLFDEF-ERGSI 391
I EA+ L DE RG +
Sbjct: 322 LIKEARDLLDELCSRGVV 339
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 162/330 (49%), Gaps = 16/330 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFS--HNYDTYHSIIHKLARARAFDAVESLLTEL 104
+V+ I ++ +D A++ K P++ N +Y+ ++ L A ++ E L+ E+
Sbjct: 33 VVNGICQEGRVDDAIEFL----KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 88
Query: 105 KQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
Q P N+ I+ + GL E A++ +I K+ + S N LL+A +
Sbjct: 89 GQKGCPPNVVTFNMLISFLCRKGLV---EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 145
Query: 163 KRYD--LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
K+ D + L SR + P++ + N L+ ALC+ +V+ A+ +L ++ G P L
Sbjct: 146 KKMDKAMAFLDLMVSRGCY---PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 202
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+++ T++ G G + A + +++ +G PD TY+ + G + R+ DA++ +
Sbjct: 203 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 262
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
++D G+ PN V Y +I CK +++ A +L M+ +P+ + +I+ L EG
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 322
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+++A +L L + + + I+ I L
Sbjct: 323 IKEARDLLDELCSRGVVRKSLINKGAIRLL 352
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK +A KL DE ++G P ++TYN ++ G+C+ + +A ++ G EPN
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+YN++++G C ++ ++ EM KGC PN +F++LI L G +V+
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 490 ATASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
G S S+N LL +D LD ++ + C
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 163
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 214/458 (46%), Gaps = 11/458 (2%)
Query: 56 NLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
N+D+A + FH A P+ +Y S+I L +A E L +++ + C
Sbjct: 130 NVDMACKFFHELKAQGLKPDDV----SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA 185
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ T+I YG AGR E A K R+ + SV S N++L L + ++ D +F+
Sbjct: 186 -YAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 244
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ + PN T NI+I LC VE A R+LDEM + PNL+T ++
Sbjct: 245 VMKKDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 302
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
+E A ++F RG PD TY L+DG K G++ +A ++ ++M D G N V Y
Sbjct: 303 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 362
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I F + + + ++++R P L +D + + G+VE +++ +
Sbjct: 363 TSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 422
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+PD S +IH L K G+ E +F ++G YN ++ G C+S ++ +
Sbjct: 423 YGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHK 482
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A + ++M EK V+P V TY ++ G KI E + EE KG N +S LI+
Sbjct: 483 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 542
Query: 473 GLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIV 509
G + G E ++ G + +WN LL +V
Sbjct: 543 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 580
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 204/439 (46%), Gaps = 12/439 (2%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLA 127
H + N T + ++ +L +AR + + Q NP+ + ++I G
Sbjct: 282 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT----YCSLIDGLGKK 337
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A + F ++ + +L+ + R + H +FK + P++
Sbjct: 338 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR-GCKPDLTL 396
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N + + K +VE + +++ S G +P++ +++ ++ G G +F +
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+G+ DA Y ++DG+ K G++ A ++++EM++ V+P TYG +++ K +
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L ++ + + L +ID + G++++A + + +++K P+ ++++
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L K +I EA F E P+ TY+ LI G+C + +A W DM ++G+
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PNV TY +I G K+GN + + E G P+ SF+ LIEG+ + E +
Sbjct: 637 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQT 696
Query: 487 VSMATASGSVESDSWNFLL 505
+S S SWNFL+
Sbjct: 697 TVYQLSSSSC---SWNFLV 712
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 189/362 (52%), Gaps = 5/362 (1%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNV 185
A R + AV + + + + + L+ AL + +R + + L+ + ++V ++
Sbjct: 23 ARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHL 82
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FT L++AL ++ V A+ ++DE+ + P++V + + + G+++ A + F +
Sbjct: 83 FT--TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHE 140
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ +G PD +YT ++ K GRL +A ++ +ME P Y MI + +
Sbjct: 141 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 200
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+A LL+ + +R +PS ++ L ++ KV++A L++ +++K+ P+++ +
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNI 259
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
II LC G++ EA ++ DE E S+ P+LLT N ++ +C++ +L EA ++++ ++G
Sbjct: 260 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 319
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
P+ TY LI G K G E R+ E+MLD G N ++ LI + G + +
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 379
Query: 485 KV 486
KV
Sbjct: 380 KV 381
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 39/337 (11%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+PN C L AL + ++ A+ + M + P +T ++G E A
Sbjct: 8 LPNQ-ACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF- 300
+ + + G+ +T L+ + G++ DA+ ++DE++ + +EP+ V Y V I+ F
Sbjct: 67 LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 126
Query: 301 ----------------------------------CKGKKSGEARNLLDDMLQRKYVPSSA 326
CK + GEA L M + VP +
Sbjct: 127 KAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 186
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I G+ EDA +L +RL + C+P ++I+ L K+ K+ EA LF+
Sbjct: 187 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
++ + P+ TYN +I +C + EA R+ D+M + PN+ T N+++ CK +
Sbjct: 247 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 306
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
E +I E +GC P+ ++ LI+GL G +G+V
Sbjct: 307 EAYKIFESASQRGCNPDCVTYCSLIDGL---GKKGQV 340
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P+ A C + L +++DA + R P + + +I L + + A +
Sbjct: 8 LPNQA-CADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L + E G + + TL+ + ++ +A L D++ +EP++ YN+ I F
Sbjct: 67 LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 126
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
K GN + E+ +G P+ S++ +I L ++G GE ++ + A SV
Sbjct: 127 KAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV 182
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 238/497 (47%), Gaps = 34/497 (6%)
Query: 8 KITAPSCLLQSIGGARCSLSTI--TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH 65
K +P +L + GA SL + T + ++P L RL S R ++L L +
Sbjct: 72 KALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSL---RLYS---RMKSLSLPIS--- 122
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
HP ++ L A AF +L ++ + C F ++R+
Sbjct: 123 -TASLHP-----------LLSALPSAPAF----ALFADMFRLRLPLC-TTTFNIMLRHLC 165
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
AG+P A++ ++ + N + NT++ R + + R + + PN
Sbjct: 166 SAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 221
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFG 244
+T +I CK V+ A++V DEM + G V P V + ++GGY +G ++ A
Sbjct: 222 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 281
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++RG TY +L+ GR T+A ++++EM G+ + TY ++I CK
Sbjct: 282 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEG 341
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+A + ++M +R + +I L ++G+V++ +L+ +R+ PD + +
Sbjct: 342 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYN 401
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I+ G I A ++ E E+ I P +TYNTL+ G+C + EA +L D+M ++
Sbjct: 402 ALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 461
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G++P++ TYN LI G+ G+ K+ +RI EM++KG P +++ LI+GL ++G +
Sbjct: 462 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 521
Query: 484 GKVVSMATASGSVESDS 500
+V +G DS
Sbjct: 522 ENMVKEMVENGITPDDS 538
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 172/371 (46%), Gaps = 20/371 (5%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q LD+ ++ G + N TY ++I + D + E+ E+K
Sbjct: 202 QAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 256
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVH 169
++ +I Y G+ + A+ R+ + V +V + N L++AL + R Y+LV
Sbjct: 257 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 316
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
M + +VFT NILI CK+ +V+ A+ + + M G+ +VT+T+++
Sbjct: 317 EMGGKG-----LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 371
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
+G ++ ++F + + RG PD Y L++ + G + A ++M EME + P+
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+VTY ++ C + EAR L+D+M +R P +I +G V+DA +
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
++ K P + +I LCK G+ +A+ + E E G P TY +LI G+
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT--- 548
Query: 409 ELTEAGRLWDD 419
TE R DD
Sbjct: 549 --TEDERAIDD 557
>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 220/488 (45%), Gaps = 43/488 (8%)
Query: 31 VTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR 90
TP WP+ L L ++ +++ AL +F A + S D+ + +
Sbjct: 4 ATPSATRWPKTLTADHLHRLVRAERDPRRALALFDAATARPSSASPPDDSTAAAAAPVLP 63
Query: 91 ARAFDAVESLLT--------------------ELKQNP-EIKCGENLFITVIRNYGLAGR 129
+R D V SLLT EL +P E+ E F++++R Y A +
Sbjct: 64 SR--DTV-SLLTSRLASASLLPLASSLLSRSRELFPSPGEL---EPPFLSLLRAYSRAHQ 117
Query: 130 PELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
P A+ F + S RS +L ALV + L + + R P T
Sbjct: 118 PLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADMRAA-GFAPTTATY 176
Query: 189 NILIKALCKKDDV--EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N+L+KA C V + A+RV +P P+ ++ T++ G RG + A+ +F ++
Sbjct: 177 NVLVKAHCSDAAVPIDDAVRVFRNIPK----PDACSYNTVIDGLCRRGRLPEARDLFAEM 232
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ G P TYT L+ + DA+K+ DEM G+ PN VTY +I+ CKG ++
Sbjct: 233 IANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRA 292
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A LLD M++ + +P++ VID LC+EG + A E+ R+ + PD + +
Sbjct: 293 ASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKL 352
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY-------NTLIAGMCESAELTEAGRLWD 418
I LC G+ EA DE I P+ LT+ + ++ +C E+ A +++
Sbjct: 353 IVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQ 412
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M +G+ T+++L++ K N ++ ++ +ML + C P + ++ ++ +
Sbjct: 413 SMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVRAYWSKK 472
Query: 479 NEGEVGKV 486
VG V
Sbjct: 473 KLRAVGSV 480
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV--E 342
G+ + +Y ++ A AR+LL DM + P++A ++ C + V +
Sbjct: 133 GLPHSARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPID 192
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
DA +++ + + PD +T+I LC+ G++ EA+ LF E G+ P+++TY TLI
Sbjct: 193 DAVRVFRNIPK----PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLI 248
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ A +A +L+D+M +G+ PNV TY+ LI G CK G A + +L+ M+ +
Sbjct: 249 HWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKL 308
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVV 487
PN ++S +I+GL + G G+ +++
Sbjct: 309 PNTITYSSVIDGLCKEGCLGQAMEIL 334
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 213/474 (44%), Gaps = 79/474 (16%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ L + F+A E ++ E+ + P NL + +R G G A
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNL-VDGLRKKGNIGS---AFDL 342
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+++KF V S+ N L+N++ ++ + D +F N HK + PN T +ILI + C
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK-GLFPNDVTYSILIDSFC 401
Query: 197 KKDDVEGAIRVL-----------------------------------DEMPSMGMVPNLV 221
K+ ++ A+ L DEM + G+ PN+V
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVV 461
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+T+++ GY G++ NA R++ ++ +G P+ T+T L+ G R+ +A K+ EM
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ V PNEVTY V+IE CK + A LLD+M+++ VP + +I LC G+V
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA---------------------- 379
+A E L + + S ++H CKEG++ +A
Sbjct: 582 SEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVL 641
Query: 380 -KKLFDEFERGSIPSLLT-------------YNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ + +R SI LL Y T+I ++ L A LWD MV +G
Sbjct: 642 IYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGC 701
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
PNV TY LI G CKIG + + EML PN+ +++ ++ L GN
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 755
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 19/412 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
T +++ L R R F L E+ + P++ ++ V+R+ A +
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVY----VYTAVVRSLCELKDFIRAREV 237
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
R+E SV + N + L +N+R ++ V + KN + +V T L+ L
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI--KNLLSYKGLRADVGTYCTLVLGL 295
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++ E +++EM G VP+ + ++ G +G+I +A + + G P
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L++ K G+L +A + + M G+ PN+VTY ++I++FCK K A + L
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 316 M----LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
M ++ P S+L I C+ GK+ A L+ ++ P+ I +++I C
Sbjct: 416 MTEVGIKATVYPYSSL----ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ A +L+ E +G P+ T+ LI+G+C + + EA +L+ +MVE V PN
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
TYN+LI+G CK GN +L+EM++KG P+ ++ LI GL +G E
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 213/477 (44%), Gaps = 41/477 (8%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKF-HPNFSHNYDTYHSIIHKLARARAFDA 96
+P + L+ ++ LD+AL H+ GK Y S+I + A
Sbjct: 387 FPNDVTYSILIDSFCKRGKLDVAL---HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+SL E+ N +K ++ ++I Y G A + + + + + + L+
Sbjct: 444 AKSLFDEMIANG-LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L R + +F ++ V+PN T N+LI+ CK+ + A +LDEM G+
Sbjct: 503 SGLCHANRMAEANKLF-GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA-- 274
VP+ T+ ++ G G + A+ D+ + ++ L+ GY K GRL DA
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621
Query: 275 ---------------------------------VKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ +M D G+ P+ V Y MI+A
Sbjct: 622 ACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANA 681
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K A L D M+ +P+ +I+ LC+ G ++ A L + +L N +P+
Sbjct: 682 KAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 741
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ + +L EG I +A +L D G + + +TYN LI G C+ + EA + +M+
Sbjct: 742 TYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 801
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G+ P+ +Y+ +I +C+ G+ KE I++ E ML++G P+ +++ LI G +G
Sbjct: 802 DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 858
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 220/468 (47%), Gaps = 26/468 (5%)
Query: 40 QRLYPKRLVSMIFRQQNLD---LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF-- 94
Q L P + ++ Q LD LAL+ F++ G H NF H+ ++ +IH L ++ +
Sbjct: 55 QTLKPHHVEKVLI--QTLDDSRLALRFFNFLG-LHKNFDHSTTSFCILIHALVQSNLYWP 111
Query: 95 -DAVESLLTELKQNPE----------IKCGENL---FITVIRNYGLAGRPELAVKTFLRI 140
++ L NPE KC + F +I+ Y + R EL +R+
Sbjct: 112 ASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQTY-VQNRRELDGLVVVRL 170
Query: 141 E-KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ +R+L+ +LN L++ +++ + +F + P+V+ ++++LC+
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS-GLRPDVYVYTAVVRSLCELK 229
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D A V+ M S G ++ T+ + G + A + + +G D TY
Sbjct: 230 DFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYC 289
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G K+ ++M+EM + G P+E +++ K G A +L++ + +
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
PS + +I+ +C++GK+++A L+ + K P++ S +I CK GK+ A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ E G ++ Y++LI+G C+ +L A L+D+M+ G++PNV Y LI G
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+CK G R+ EM KG PN +F+ LI GL + E K+
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 136/253 (53%), Gaps = 2/253 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
++LI + ++ D I +L +M G+ P+ V +TT++ G+++ A ++ ++
Sbjct: 639 SVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVS 698
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G +P+ TYT L++G K+G + A + EM + PN+ TY ++ + + + E
Sbjct: 699 EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD-YLTSEGNIE 757
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
L D+L ++ ++ +I C+ G++++A E+ ++ PD STII+
Sbjct: 758 KAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 817
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C+ G + EA KL++ RG P + YN LI G C + ELT+A L DDM+ +GV+P
Sbjct: 818 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 877
Query: 428 NVFTYNMLIQGFC 440
N TYN LI G C
Sbjct: 878 NRATYNSLIHGTC 890
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+PNV T LI LCK ++ A + EM + +PN T+ L G+IE A +
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 761
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D+L G++ + TY +L+ G+ KLGR+ +A +V+ M D+G+ P+ ++Y +I +C
Sbjct: 762 LH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 820
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ EA L + ML R P + +I C G++ A EL ++R+ P+ A
Sbjct: 821 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 880
Query: 362 ISSTIIHWLC 371
+++IH C
Sbjct: 881 TYNSLIHGTC 890
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 3/256 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y +I+ + R + ++ LL ++ + ++ L+ T+I AG ++A + +
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQM-HDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM 696
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+V + L+N L + D L+ + +PN T + L + +
Sbjct: 697 VSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS-NSLPNQNTYACFLDYLTSEGN 755
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E AI++ D + G + N VT+ ++ G+ G I+ A V +++D G PD +Y+
Sbjct: 756 IEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ Y + G L +A+K+ + M + GV P+ V Y +I C + +A L DDM++R
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874
Query: 321 YVPSSALCCKVIDLLC 336
P+ A +I C
Sbjct: 875 VKPNRATYNSLIHGTC 890
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV I LCK+ V+ A VL+EM G+ PN+ THTT++ G G E A R+
Sbjct: 141 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 200
Query: 243 FGDIL-DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
F ++ + P+ TYTV++ GY + G+L A ++ M + G++PN TY +I C
Sbjct: 201 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 260
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
KG A L++ M Q ++P+ VID C++GK+++A ++ + + D
Sbjct: 261 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 320
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I CK+G I A LFD E G P + Y +LI+ C+ ++ E+ + +D
Sbjct: 321 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 380
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G+ P TY +I G+CK+G + +R+ E M+ GCF + ++ LI GL
Sbjct: 381 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 434
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 44/320 (13%)
Query: 148 SVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
+V + TL++ L + + + L + K+S +K PNV T ++I C++ +
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK----PNVHTYTVMIGGYCREGKLAR 232
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A +L M G+ PN T+TT++GG+ G + A + + G++P+ TY ++D
Sbjct: 233 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 292
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ K G++ +A KV+ G++ +++TY ++I CK
Sbjct: 293 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCK--------------------- 331
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+G + A +L+ R++ C PD +++I C++ ++ E++K F
Sbjct: 332 --------------QGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFF 377
Query: 384 DE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
D+ G +P+ TY ++IAG C+ T A R+++ MV+ G + TY LI G CK
Sbjct: 378 DKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKE 437
Query: 443 GNAKEGIRILEEMLDKGCFP 462
+E + E MLDK P
Sbjct: 438 SRLEEAKALYEGMLDKRLVP 457
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A +V D M G+ P ++ G +E + + G+ D T TV++
Sbjct: 57 ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
+ GR D + M + G PN V Y I+ CK + +A ++L++M+ R P
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI-IHWLCKEGKIWEAKKL 382
+ +ID LC+ G E A L+ +L++ + N + T+ I C+EGK+ A+ L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E+G P+ TY TLI G C+ A L + M ++G PN++TYN +I GFCK
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
G +E ++L +G +K ++++LI
Sbjct: 297 KGKIQEAYKVLRMATSQGLKFDKITYTILI 326
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 145/296 (48%), Gaps = 4/296 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T LI CK + A ++++M G +PN+ T+ ++ G+ +G I+ A +V
Sbjct: 247 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 306
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+G D TYT+L+ + K G +T A+ + D M +NG P+ Y +I +C+
Sbjct: 307 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 366
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ E++ D L +P+ +I C+ G+ A +++R+++ C D+
Sbjct: 367 QRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSIT 426
Query: 363 SSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+I LCKE ++ EAK L++ ++ +P +T TL C + + A + D +
Sbjct: 427 YGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLD 486
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ V T +++++ +G+ L+++LD+ + +++ I YE+
Sbjct: 487 KR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYEN 539
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
++ G A KV D M GV P +G ++ C+ K E LL M + + +
Sbjct: 49 LETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDN 108
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLR-------------------------------- 353
A C V+ LCE+G+ +D E ++R+L
Sbjct: 109 ATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEE 168
Query: 354 ---KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESA 408
+ P+ +T+I LCK G A +LF + + S P++ TY +I G C
Sbjct: 169 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 228
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+L A L MVE+G++PN TY LI G CK G+ ++ +M +G PN +++
Sbjct: 229 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 288
Query: 469 LLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLT 506
+I+G + G E KV+ MAT+ G + ++ L+T
Sbjct: 289 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILIT 327
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 37/279 (13%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +TY ++I + +FD L+ ++KQ F+ I Y +
Sbjct: 248 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEG--------FLPNIYTY------NAVIDG 293
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + K +Q + + L A Q ++D + T ILI C
Sbjct: 294 FCK--KGKIQEAYKVLRM---ATSQGLKFDKI------------------TYTILITEHC 330
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ + A+ + D M G P++ +T+++ Y + +E +++ F L G +P
Sbjct: 331 KQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQ 390
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT ++ GY K+GR T A++V + M NG + +TYG +I CK + EA+ L + M
Sbjct: 391 TYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM 450
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
L ++ VP + C K A + RL ++
Sbjct: 451 LDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ 489
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 216/460 (46%), Gaps = 46/460 (10%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y++++ R DA L+ + P+ + +IR GR A+ +
Sbjct: 112 YNTLVAGYCRYGRLDAARRLIASMPVPPDAY----TYTPIIRGLCDRGRVGDALALLDDM 167
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ Q SV + LL A+ ++ + + R K PN+ T N++I +C++
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNVIINGMCREGR 226
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A +L+ + S G P++V++TT+L G ++ K +F +++D+ VP+ T+ +
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ + + G + A++V+ +M +G PN ++I A CK + +A + L++M
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P + V+ LC G+ E A EL ++RKNC P+ +T I LC++G I +A
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406
Query: 381 KLFDEFE--------------------RGSI-------------PSLLTYNTLIAGMCES 407
KL + +G + P+ +TY TL+ G+C +
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHA 466
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L M++K N T+N+L+ FC+ G +E + ++ +M++ GC PN +F
Sbjct: 467 ERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITF 526
Query: 468 SLLIEGLYESGN--------EGEVGKVVSMATASGSVESD 499
+ L++G+ + N G V K VS+ T + S D
Sbjct: 527 NTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 566
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 154/297 (51%), Gaps = 4/297 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+ C LI+ LC++ A RVL + G ++ + T++ GY G ++ A+R+
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ PDA TYT ++ G GR+ DA+ ++D+M G +P+ VTY V++EA CK
Sbjct: 132 IASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
GEA N+LD+M + P+ +I+ +C EG+V+DA E+ RL PD
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ LC + + K LF E ++ +P+ +T++ L+ C + A ++ M
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ G PN N++I CK G + L M GC P+ S++ ++ GL +G
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 5/364 (1%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L +IRN GR A + E V + NTL+ + R D + +
Sbjct: 76 LCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIAS- 134
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+ +T +I+ LC + V A+ +LD+M G P++VT+T +L
Sbjct: 135 ---MPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSG 191
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A V ++ +G P+ TY V+++G + GR+ DA ++++ + G +P+ V+Y
Sbjct: 192 FGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTT 251
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C ++ + + L +M+ +K VP+ ++ C G VE A ++ +++ +
Sbjct: 252 VLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG 311
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
C P+ + + +I+ +CK+G++ +A + G P ++Y T++ G+C + A
Sbjct: 312 CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAK 371
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +MV K PN T+N I C+ G ++ I+++E M + GC +++ L+ G
Sbjct: 372 ELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 431
Query: 475 YESG 478
G
Sbjct: 432 CVQG 435
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 149/288 (51%), Gaps = 4/288 (1%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ L +DD+ A R+++ S G P++ T ++ RG +A RV G
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
D Y L+ GY + GRL A +++ M V P+ TY +I C + G+A
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
LLDDMLQR PS +++ +C+ +A + + K C P+ + II+ +C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222
Query: 372 KEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+EG++ +AK++ + G P +++Y T++ G+C + + L+ +MV+K PN
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
T++ML++ FC+ G + I++L++M GC PN T +++I + + G
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQG 330
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 189/398 (47%), Gaps = 10/398 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++ + ++ F ++L E++ C N+ + +I GR + A +
Sbjct: 178 TYTVLLEAVCKSSGFGEAMNVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAKEIL 234
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ + Q + S T+L L +R+D V ++F K K VPN T ++L++ C+
Sbjct: 235 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDMLVRFFCR 293
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
VE AI+VL +M G PN ++ +G +++A ++ G PD +
Sbjct: 294 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 353
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT ++ G + GR A +++ EM PNEVT+ I C+ +A L++ M
Sbjct: 354 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 413
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ ++ C +G+V+ A EL+ L C P+ +T++ LC ++
Sbjct: 414 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLD 470
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +L + P + +T+N L++ C+ + EA L + M+E G PN+ T+N L+
Sbjct: 471 AAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 530
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G K N++E + +L ++ KG + ++S +++ L
Sbjct: 531 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 568
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 151/342 (44%), Gaps = 11/342 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-- 104
+++ I +Q +D A + G + N + +Y +++ L RA ++ + LL E+
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCN--PDTISYTTVLRGLCRAGRWEHAKELLPEMVR 379
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
K P + N FI ++ GL E A+K + ++ + + N L++ R
Sbjct: 380 KNCPPNEVTFNTFICILCQKGLI---EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR 436
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D +F N PN T L+ LC + ++ A +L M N VT
Sbjct: 437 VDSALELFNN----LPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFN 492
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ + +G +E A + +++ G P+ T+ L+DG K +A++++ +
Sbjct: 493 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 552
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GV + +TY +++ + ++ EA +L + P + K++ LC+ + + A
Sbjct: 553 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 612
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ + ++ CMP+ + +I L EG + EA+ + E
Sbjct: 613 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 654
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 33/152 (21%)
Query: 376 IWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EA +L + RG P + LI +C ++A R+ G +VF YN
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 435 LIQGFCKI--------------------------------GNAKEGIRILEEMLDKGCFP 462
L+ G+C+ G + + +L++ML +GC P
Sbjct: 115 LVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQP 174
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ ++++L+E + +S GE V+ A G
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG 206
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 222/433 (51%), Gaps = 19/433 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L + + GV+ + N LI+G + G+ +L+ ML + K+++
Sbjct: 383 GQXXKAETLVRQLXKLGVQ-DXTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 468 SLLIEGLYESGNE 480
+ L++ Y NE
Sbjct: 442 NSLVQS-YLKKNE 453
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 174/328 (53%), Gaps = 1/328 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV N LI C D+E A+ V + M G PN+ T+T ++ G+ ++ A +
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML 269
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++D G VP+ TYT L+ G G+L A +++ ME++G+ PNE T V+I+A CK
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCK 329
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ GEA+ LL ++Q+ + + +ID LC+ G+ A L + L+ + +PD
Sbjct: 330 HERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHT 389
Query: 363 SSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S++I LC++ ++ EA + D+ E+G PS +TY +I + + ++ D M+
Sbjct: 390 YSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMI 449
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G++P+VFTY + ++ +C G ++ ++ M+D G PN +++ LI G G
Sbjct: 450 AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509
Query: 482 EVGKVVSMATASGSVESDSWNFLLTRIV 509
+ A+G ++ +L R++
Sbjct: 510 QAFSTFKHMVANGCKPNEESYTVLLRLL 537
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 198/440 (45%), Gaps = 42/440 (9%)
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLR 139
++ + LAR R +ES + + NL + T+I Y LAG
Sbjct: 45 NAFLMALARHRMLADMESFASRMP-------ARNLRTYTTLINAYCLAG----------- 86
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR--------HKFKVVP------NV 185
++ S R L++LL A + + R F ++P
Sbjct: 87 ----DLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTA 142
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FT L+ LC V A+ V M + G P+ + T++ G G A+ + D
Sbjct: 143 FTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSD 202
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G+ P+ Y L+DGY +G L AV V + M+ NG PN TY +I FCK +K
Sbjct: 203 AMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRK 262
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A L M+ VP+ +I C +G+++ A L + + +P+ S
Sbjct: 263 LDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSV 322
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I LCK ++ EA+ L ++G + + Y +LI G+C++ A RL +V +G
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY-ESGNEGEV 483
P+ TY+ LI G C+ E + +L++M++KG P+ +++++I+ L E G +G
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS- 441
Query: 484 GKVVSMATASGSVESDSWNF 503
K++ A+G ++ D + +
Sbjct: 442 KKILDKMIAAG-IKPDVFTY 460
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 179/382 (46%), Gaps = 13/382 (3%)
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP--NVFTCNILIKALCKKDDVEGAIRV 207
R LN L AL + H M + +P N+ T LI A C D+ + R
Sbjct: 42 RCLNAFLMALAR-------HRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRH 94
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L + G P+ +T+ + GY G + +A R+F + RG V A TYT L+ G
Sbjct: 95 LSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCG 154
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G + +A+ V M+ +G P+ Y M+ C ++ EA LL D + + P+ +
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF- 386
+ID C G +E A ++++R+ C P+ + +I CK K+ A LF
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ G +P+++TY LI G C +L A RL M G+ PN +T ++LI CK
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
E +L ++ KG N+ ++ LI+GL ++G +++ + G V ++ +++ L+
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394
Query: 506 TRIV--SDLDSGAGALDELLVK 525
+ +L LD+++ K
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEK 416
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/570 (22%), Positives = 233/570 (40%), Gaps = 128/570 (22%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIR 122
+AG + + Y +++H L A E+LL++ P + ++ +I
Sbjct: 165 FAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVV----VYNALID 220
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--------- 173
Y G ELAV F R++ +VR+ L++ ++++ D ++F
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280
Query: 174 -------------------------NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
S +VPN +TC++LI ALCK + V A +L
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+ G+ N + +T+++ G G A R+ ++ +G+VPDA TY+ L+DG +
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQ 400
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVM-------------------------------- 296
L++A+ V+D+M + GV+P+ VTY ++
Sbjct: 401 KELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTY 460
Query: 297 ---IEAFCKGKKSGEARNLLDDMLQRKYVPS----SALCCKVIDL-LCEEG------KVE 342
+ ++C + +A +++ M+ P+ +AL C +L L + V
Sbjct: 461 TIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVA 520
Query: 343 DAC----ELWKRLLR-------KNCMPDNAIS---------------------------- 363
+ C E + LLR N +P N++S
Sbjct: 521 NGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDI 580
Query: 364 -STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ + LC+ ++ EAK L E + ++ PS Y ++IA C LTEA D MV
Sbjct: 581 YNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMV 640
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+ G P + +Y +I C+ G+ + ++ +ML K + ++ +LI+GL + G
Sbjct: 641 KSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVA 700
Query: 482 EVGKVVSMATASGSVESDSWNFLLTRIVSD 511
E ++S+ SD+ LT ++D
Sbjct: 701 ECSSLLSVMEEKNYRPSDALYARLTGKITD 730
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 158/394 (40%), Gaps = 60/394 (15%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y S+I L +A F A + L+ L + + + ++I GL + EL+
Sbjct: 351 NEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVP-DAHTYSSLID--GLCRQKELSEAM 407
Query: 137 FL---RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ +EK VQ S + +++ LV+ D + + + P+VFT I ++
Sbjct: 408 LVLDDMMEK-GVQPSPVTYTIIIDELVREVGADGSKKIL-DKMIAAGIKPDVFTYTIFVR 465
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+ C + +E A ++ M G+ PNLVT+ ++ GY G A F ++ G P
Sbjct: 466 SYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP 525
Query: 254 DATTYTVLMDGYIK---------------------------------------------- 267
+ +YTVL+ IK
Sbjct: 526 NEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFL 585
Query: 268 -----LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ RL +A ++ EM+ + P+E Y +I C+ K EA +D M++ Y+
Sbjct: 586 TSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYI 645
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I LCEEG ++ A +++ +L K + +I L ++G + E L
Sbjct: 646 PQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSL 705
Query: 383 FDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
E + PS Y L + ++ ++ E R
Sbjct: 706 LSVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 200/380 (52%), Gaps = 8/380 (2%)
Query: 1 MLRHLHQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLA 60
+ RHL ++ S L + I V+ P P P R+ +I Q + LA
Sbjct: 12 VFRHLTSPLSTSSRFLFYSSSEHEARKPI-VSNPKSPIGS---PTRVQKLIASQSDPLLA 67
Query: 61 LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITV 120
+IF YA + PNF H+ ++ +I KL R R F+ ++ +L + + + GE +F +
Sbjct: 68 KEIFDYASQ-QPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGE-IFTYL 125
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKF 179
I+ Y A PE + TF ++ +FN + LN +L+ LV ++ Y +FK+SR
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH- 184
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V+PN + N+L++A C DD+ A ++ +M +VP++ ++ ++ G+ +G + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ D+L++G+VPD +YT L++ + +L +A K++ M+ G P+ V Y MI
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FC+ ++ +AR +LDDML P+S +I LC++G ++ + + ++ K P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 360 NAISSTIIHWLCKEGKIWEA 379
++S+ ++ C GK+ EA
Sbjct: 365 FSVSNCLVKGFCSFGKVEEA 384
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 3/281 (1%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIK-LGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E F +L+ + P ++D + G L A ++ +GV PN +Y +
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++AFC A L ML+R VP +I C +G+V A EL +L K
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD +T+++ LC++ ++ EA KL + +G P L+ YNT+I G C +A
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ DDM+ G PN +Y LI G C G EG + LEEM+ KG P+ + + L++G
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDS 514
G E VV + +G ++ SD+W ++ I ++ +S
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 416
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 211/432 (48%), Gaps = 8/432 (1%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+I R N L FH+A + N Y S++ + + R F +E +L ++K N
Sbjct: 65 VIDRIHNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMK-NRN 123
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLV 168
K +VI Y G + AVK F + E +N V + N+LLN LV+N + D+
Sbjct: 124 FKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVA 183
Query: 169 -----HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
++ + H +V + ++ I++K LC VE +++D+ G VPN+V +
Sbjct: 184 CELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFY 243
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
I+ GY +GD++ A RVF ++ +G++P TY L+DG+ K G+ ++++EM
Sbjct: 244 NVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNV 303
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G+ N + +I+A K +A ++ M + P +I+ C G++++
Sbjct: 304 MGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKE 363
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGK-IWEAKKLFDEFERGSIPSLLTYNTLIA 402
A E +R + +P+ + ++H CK+G + + LF E G P L++Y I
Sbjct: 364 AEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIH 423
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G E+ A + + M+EKGV P+ YN+L+ G CK G +L EMLD P
Sbjct: 424 GSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQP 483
Query: 463 NKTSFSLLIEGL 474
+ ++ L++G
Sbjct: 484 DAYMYATLVDGF 495
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 181/403 (44%), Gaps = 48/403 (11%)
Query: 117 FITVIRNYGL-------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
F+ + YG AG+ ++ + + + +V+ N++++A +Y LV
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDA---KYKYGLVD 327
Query: 170 LMFKNSRH--KFKVVPNVFTCNILIK---------------------------------- 193
+ R + P++ T NILI
Sbjct: 328 KAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLM 387
Query: 194 -ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
A CK+ D A +L ++ G P+LV++ + G V G+I+ A V ++++G
Sbjct: 388 HAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVF 447
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PDA Y VLM G K GR A ++ EM D ++P+ Y +++ F + + +A L
Sbjct: 448 PDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATEL 507
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ ++ + P +I LC+ GK+ DA ++ N PD ST+I K
Sbjct: 508 FEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVK 567
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ + A K+F + + P+++ Y +LI G C+ A+++ A +++ M +EPNV T
Sbjct: 568 QHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVT 627
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
Y +LI GF K G ++ E ML C PN T+F LI GL
Sbjct: 628 YTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL 670
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 170/385 (44%), Gaps = 14/385 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++ Y G +A +I + + + S ++ V D V LM +
Sbjct: 383 YTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEID-VALMVREKM 441
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ V P+ N+L+ LCKK A +L EM + + P+ + T++ G++ ++
Sbjct: 442 MEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNEL 501
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A +F ++ +G P Y V++ G K G++TDAV +++M+ P+E T+ +
Sbjct: 502 DKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTV 561
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ + K A + M+++KY P+ +I+ C+ + A ++++ + N
Sbjct: 562 IDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNL 621
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELT---- 411
P+ + +I K GK +A F+ +P+ T++ LI G+ T
Sbjct: 622 EPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIE 681
Query: 412 ---EAGR-----LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
E R + M+ +G + TYN +I CK G + +ML KG +
Sbjct: 682 KNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMD 741
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVS 488
FS L+ GL ++G E ++S
Sbjct: 742 SVCFSALLHGLCQTGKSKEWRNIIS 766
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 156/345 (45%), Gaps = 23/345 (6%)
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
N+Q TL++ ++N D +F+ K + P V N++IK LCK +
Sbjct: 479 LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSK-GIDPGVVGYNVMIKGLCKCGKMT 537
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+ +++M P+ TH+T++ GYV + D+++A ++FG ++ + + P+ YT L+
Sbjct: 538 DAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLI 597
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+G+ K+ ++ A KV M+ +EPN VTY ++I F K K +A + + ML +
Sbjct: 598 NGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCL 657
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ +I+ L L+ KN D ++ + EG W
Sbjct: 658 PNDTTFHYLINGLTNITNT-------TLLIEKNEENDRSLILDFFATMISEG--WSQ--- 705
Query: 383 FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ TYN++I +C+ + A L M+ KG + ++ L+ G C+
Sbjct: 706 ----------VIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQT 755
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G +KE I+ L K F +SL ++ G E ++
Sbjct: 756 GKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYIL 800
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 222/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K + R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAAKAETLVRQLLKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 168/312 (53%), Gaps = 1/312 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F +S V PNV+T NIL++ALC + + A+ VL +M G PN VT+ T++ +
Sbjct: 144 FFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFC 203
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G+++ A+R+ + + G P+ T+ +++G K GR+ DA KV DEM G+ P+ V
Sbjct: 204 RAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV 263
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+Y ++ +CK S EA ++ +M ++ +P +I ++C+ G +E A L + +
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAEL 410
+ + + +I CK+G + +A E + I PS++ YN LI G C +
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA L +M KGV+P+V TY+ ++ +CK G+ ++ ++ML+ G P+ ++S L
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSL 443
Query: 471 IEGLYESGNEGE 482
I L E G+
Sbjct: 444 IRVLCEEKRLGD 455
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 213/467 (45%), Gaps = 24/467 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYA--GKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + LV+ R +D A ++ G PN T++S+++ + +A +
Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLV----TFNSVVNGICKAGRMED 245
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+ E+ + G + + T++ Y G A+ F + + + V + +L+
Sbjct: 246 ARKVFDEMVKEGLAPDGVS-YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLI 304
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ + + + + + R + + N T LI CKK ++ A+ + EM +
Sbjct: 305 HVMCKAGNLERAVGLVREMRER-GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++V + ++ GY G ++ A+ + ++ +G PD TY+ ++ Y K G A +
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ +M +NGV P+ +TY +I C+ K+ G+A L +M+ P +ID C
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK-LFDEFERGSIPSLL 395
+EG VE A L +++ +PD S +I+ L K + EA++ LF + +P+ +
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543
Query: 396 TYN---------------TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
Y+ L+ G C + EA +++ ++++ + Y++LI G C
Sbjct: 544 KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC 603
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ GN + + ++ML G PN TS LI GL+E G E +V+
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVI 650
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 142/281 (50%), Gaps = 2/281 (0%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P+++ + +L + + +A+R F +L G P+ TY +L+ G +A
Sbjct: 118 GYAPSVLAYNAVLLA-LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ V+ +M G +PN VTY ++ AFC+ + A L+D M + P+ V++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPS 393
+C+ G++EDA +++ ++++ PD +T++ CK G EA +F E R G +P
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++T+ +LI MC++ L A L +M E+G++ N T+ LI GFCK G + + +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
EM P+ ++ LI G G E ++V A G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 159/357 (44%), Gaps = 52/357 (14%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ S+IH + +A + L+ E+++ ++ E F +I + G + A+
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRER-GLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + +Q SV N L+N R D + + K V P+V T + ++ A CK
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK-GVKPDVVTYSTILSAYCKNG 416
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D A ++ +M G++P+ +T+++++ + +A +F +++ G PD TYT
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG+ K G + A+ + DEM GV P+ VTY V+I K ++ EA+ LL +
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536
Query: 320 KYVPSS----AL--CCK------VIDLL-------------------------------- 335
+ VP++ AL CC+ V+ LL
Sbjct: 537 EPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYS 596
Query: 336 ------CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
C EG V A K++L+ P++ + ++I L ++G + EA ++ +
Sbjct: 597 VLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 154/375 (41%), Gaps = 67/375 (17%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N T+ ++I + D + E++Q P + C + +I Y + GR + A
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC----YNALINGYCMVGRMDEA 386
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ +E V+ V + +T+L+A +N + L M +N V+P+ T +
Sbjct: 387 RELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG-----VLPDAITYS 441
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI+ LC++ + A + M S+G+ P+ VT+T+++ G+ G++E A + +++
Sbjct: 442 SLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKA 501
Query: 250 GWVPDATTYTVLMDGYIKLGR--------------------------------------- 270
G +PD TY+VL++G K R
Sbjct: 502 GVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVL 561
Query: 271 -----------LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+ +A KV + D + Y V+I C+ +A + MLQ
Sbjct: 562 ALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQC 621
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P+S +I L E+G V +A ++ ++LL + D S +I KEG +
Sbjct: 622 GFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAV 681
Query: 380 KKLFDEFER-GSIPS 393
+ R G +PS
Sbjct: 682 LDVLHGMARDGLLPS 696
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 166/307 (54%), Gaps = 4/307 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP T N LI LCK + A +L+EM G +P++ T+TT++ G+ ++A R
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAF 300
VF ++ RG+ PD TY+ L+DG K GRL +A+ + M +G PN VTY +I F
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ K EA NLL+ M + P +++ C+ +++DA +L ++ RK P+
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
++++ LC+E ++ +A + E R S P++ TYNT++ G C +L EA +
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM-- 288
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ E PNV ++N++I+G CK+ + E + ++EE + C P+ ++ +I+ L
Sbjct: 289 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348
Query: 480 EGEVGKV 486
E +V
Sbjct: 349 VDEACRV 355
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 175/324 (54%), Gaps = 12/324 (3%)
Query: 151 SLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ N+L++ L + +R YDL+ M + +P++FT LI CK + A+R
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSG-----CIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG-WVPDATTYTVLMDGY 265
V +++ + G P++VT++ ++ G G ++ A +FG ++ G +P+ TY L+ G+
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
++G++ +A+ +++ M + G P+ VTY ++ FCK + +A +LL+ M ++ P+
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
++D LC E ++ DA + + RK+C P +TI+ C+ ++ EA+K E
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E P+++++N +I G+C+ +EA L ++ + P+V Y +I C+
Sbjct: 291 -EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349
Query: 446 KEGIRILEEMLDK-GCFPNKTSFS 468
E R+ +ML++ GC PN ++S
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITYS 373
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 131/230 (56%), Gaps = 2/230 (0%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ D VP A TY L+ G K R ++A +++EM +G P+ TY +I FCK KK
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISS 364
S +A + + ++ R + P +ID LC+EG++++A +L+ R+++ +CMP+ +
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++I C+ GK+ EA L + E GS P ++TY TL+ G C+ A L +A L + M K
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
G+ PNV T+ L+ G C+ + + IL EM K C P +++ +++G
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 163/326 (50%), Gaps = 11/326 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
TY+S+I L +A LL E+ + C ++F T+I + + + + A++ F
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYS---GCIPDIFTYTTLITGFCKSKKSDDALRVF 112
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + V + + L++ L + R +F +PN T N LI C+
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A+ +L+ M G P++VT+TT++ G+ +++A + + +G P+ T
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+T LMDG + RL+DAV ++ EM P TY +++ +C+ + EAR ML
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF---ML 289
Query: 318 QRKYVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P + + + I LC+ + +A EL + R+ C PD + +T+I LC+E K+
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349
Query: 377 WEAKKLFDEF--ERGSIPSLLTYNTL 400
EA +++ + E G +P+ +TY+T
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITYSTF 375
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+P +++I LCK + EA L +E G IP + TY TLI G C+S + +A R
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CFPNKTSFSLLIEGL 474
+++ +V +G P+V TY+ LI G CK G KE I + M+ G C PN +++ LI G
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 475 YESGNEGEVGKVVSMATASGS 495
G E ++ +GS
Sbjct: 171 CRMGKMDEAMNLLERMAETGS 191
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 223/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAAKAETLVRQLLKLGVQDPTAL--NTLIRGHSQEGSPDSXFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 211/442 (47%), Gaps = 49/442 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++ + D V LL E++ C N + GL + +L L
Sbjct: 1121 TYNTLLDSFLKEGRKDKVAMLLKEMETRGS-GCLPNDVTYNVVITGLTRKGDLEEAAEL- 1178
Query: 140 IEKFNVQRSVRSL--NTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+E + + S N L+ L+ K YDL L +N ++P V T N +I
Sbjct: 1179 VEGMRLSKKASSFTYNPLITGLLARGCVKKVYDL-QLEMENE----GIMPTVVTYNAMIH 1233
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
L + VE A EM +MG++P+++T+ ++L GY G+++ A +FGD+ G P
Sbjct: 1234 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 1293
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY +L+DGY +LG L +A + +EM + G PN TY ++++ + AR
Sbjct: 1294 TVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFF 1353
Query: 314 DDMLQRKYVP-----SSALCCKVI--DL----------------------------LCEE 338
D+ML + P ++ +C ++I D+ LC+
Sbjct: 1354 DEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKT 1413
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
G ++DA EL +++ PD + +IH C+ G + EA+K+F+ G +PS +T+
Sbjct: 1414 GNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTF 1473
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+I C L A + M+E+GVEPN TYN+LI C++G + EML+
Sbjct: 1474 TVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLE 1533
Query: 458 KGCFPNKTSFSLLIEGLYESGN 479
+G NK +++LLI+G + GN
Sbjct: 1534 RGLVANKYTYTLLIDGNCKVGN 1555
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 159/349 (45%), Gaps = 37/349 (10%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G E A F + + V + N+LLN + L+F + R + + P V
Sbjct: 1238 SGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR-RAGLAPTVL 1296
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NILI C+ D+E A + +EM G +PN+ T+T ++ G + + A+ F ++
Sbjct: 1297 TYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356
Query: 247 LDRGWVPD-----------------------------------ATTYTVLMDGYIKLGRL 271
L +G PD TY +L+ G K G L
Sbjct: 1357 LSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNL 1416
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
DA ++ +M NG++P+ +TY +I A C+ EAR + ++M+ +PS+ +
Sbjct: 1417 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 1476
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGS 390
I C G + A ++++L + P+ + +IH LC+ G+ A F E ERG
Sbjct: 1477 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGL 1536
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ + TY LI G C+ +A R + +M + G+ P+ T+ L++GF
Sbjct: 1537 VANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 171/359 (47%), Gaps = 3/359 (0%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDD 200
+ ++ S+ + NTLL++ ++ R D V ++ K + +PN T N++I L +K D
Sbjct: 1112 ELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGD 1171
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +++ M + + T+ ++ G + RG ++ + ++ + G +P TY
Sbjct: 1172 LEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNA 1230
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G ++ G + A EM G+ P+ +TY ++ +CK EA L D+ +
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P+ +ID C G +E+A L + + + C+P+ + ++ + A+
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAR 1350
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ FDE +G P YNT I ++ A L + ++ +G+ + TYN+LI G
Sbjct: 1351 EFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGL 1410
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK GN K+ + +M+ G P+ +++ LI E G E K+ + + G + S
Sbjct: 1411 CKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 160/356 (44%), Gaps = 38/356 (10%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P+V CN +++ L + V +EM +G+ P++VT+ T+L ++ G +
Sbjct: 1080 VAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVA 1139
Query: 241 RVFGDILDR--GWVPDATTYTVLMDGYIKLGRLTDAVKVMD------------------- 279
+ ++ R G +P+ TY V++ G + G L +A ++++
Sbjct: 1140 MLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITG 1199
Query: 280 ---------------EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
EME+ G+ P VTY MI + A+ +M +P
Sbjct: 1200 LLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPD 1259
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+++ C+ G +++A L+ L R P + +I C+ G + EA+ L +
Sbjct: 1260 VITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKE 1319
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E E+G +P++ TY L+ G L A +D+M+ KG++P+ F YN I +G
Sbjct: 1320 EMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG 1379
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
+ + E ++ +G + ++++LI GL ++GN + K + M S ++ D
Sbjct: 1380 DIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKD-AKELQMKMVSNGLQPD 1434
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 37/269 (13%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
F ++ G PD ++ R D V +EM + G+EP+ VTY ++++F
Sbjct: 1071 AFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFL 1130
Query: 302 KGKKSGEARNLLDDMLQRKY--VPSSALCCKVIDLLCEEGKVEDACELWK---------- 349
K + + LL +M R +P+ VI L +G +E+A EL +
Sbjct: 1131 KEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS 1190
Query: 350 --------RLLRKNC----------------MPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
LL + C MP + +IH L + G + A+ F E
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250
Query: 386 FER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
G +P ++TYN+L+ G C++ L EA L+ D+ G+ P V TYN+LI G+C++G+
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+E + EEM ++GC PN ++++L++G
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKG 1339
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P + N ++ + ++A + + ++M+E G+EP++ TYN L+ F K G +
Sbjct: 1079 GVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKV 1138
Query: 449 IRILEEMLDK--GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
+L+EM + GC PN +++++I GL G+ E ++V S S ++N L+T
Sbjct: 1139 AMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLIT 1198
Query: 507 RIVS 510
+++
Sbjct: 1199 GLLA 1202
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 227/442 (51%), Gaps = 9/442 (2%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYH--SIIHKLARARAFDAVESLLTELKQNPEIKCGE- 114
++ L+ FH+A K N + + + S++ LAR R F VESLL +K + E
Sbjct: 45 EMGLEFFHWASK-QSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTREA 103
Query: 115 -NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+L I+V + GL R +TF++I + V S N+LLN LV++ + ++ ++
Sbjct: 104 FSLVISVFADCGLVDRALEFYRTFIKIH--HCVPDVFSCNSLLNVLVKHGKVEIACKVYD 161
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ V N C I++K LCK+ VE +++++ G +PN+V + T++ GY +
Sbjct: 162 EMVDRNGEVDNYTVC-IMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKK 220
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
GD E A +F ++ +G++P TY +++G+ K G+ K++ EM + G++ + Y
Sbjct: 221 GDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIY 280
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I+A K EA + + M++ P A +I C G+V A +L ++ ++
Sbjct: 281 NNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIK 340
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ +P+ + +IH CK+G+ A L + ERG P L+TY LI G+ + E+
Sbjct: 341 RGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDV 400
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A + + MVEKGV P+ YN+L+ G CK G +L EMLD+ P+ + L++
Sbjct: 401 ALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVD 460
Query: 473 GLYESGNEGEVGKVVSMATASG 494
G G+ E K+ + G
Sbjct: 461 GFIRHGDFEEAKKLFELTIEKG 482
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 207/442 (46%), Gaps = 18/442 (4%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y+++I + + L ELK P +K + +I + G+ E+ K
Sbjct: 210 YNTLIDGYCKKGDTERANVLFKELKMKGFLPTVK----TYGAIINGFCKKGKFEVVDKLL 265
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + + S+ N +++A ++ + D V M K+ P++ T NILI
Sbjct: 266 VEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSG-----CDPDMATYNILIT 320
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C +V A ++L++ G++PN V++T ++ Y +G+ A + + +RG P
Sbjct: 321 GSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKP 380
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY L+ G I G + A+ V ++M + GV P+ Y V++ CK + A+ LL
Sbjct: 381 DLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLL 440
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ML + P + + ++D G E+A +L++ + K P + +I CK
Sbjct: 441 AEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKF 500
Query: 374 GKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + +A F +G P TY+T+I G + +L A R++ MV+ +PNV TY
Sbjct: 501 GMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTY 560
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+LI GFC G+ + ++ML PN ++++LI + N +
Sbjct: 561 TLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLM 620
Query: 493 SGSVESD-SWNFLLTRIVSDLD 513
+ +D ++N+L+ + +++D
Sbjct: 621 EKCLPNDVTYNYLMNGLTNNVD 642
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 171/385 (44%), Gaps = 14/385 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +I NY G A+ +++ + + + + L++ L+ D V L +N
Sbjct: 350 YTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVD-VALTVRNKM 408
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ V+P+ N+L+ LCKK + A +L EM + P+ T++ G++ GD
Sbjct: 409 VEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDF 468
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E AK++F +++G P Y ++ GY K G + DA+ M P+E TY +
Sbjct: 469 EEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTI 528
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ + K A + M++ P+ +I+ C G + A + +K++L
Sbjct: 529 IDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRL 588
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMC---------E 406
P+ + +I CK + +A F++ +P+ +TYN L+ G+ +
Sbjct: 589 KPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQ 648
Query: 407 SAELTEAGRLWDD---MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+E TE + + M+ G + +YN ++ C+ K + + ++M+ KG P+
Sbjct: 649 RSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPD 708
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVS 488
S L+ GL G + V+S
Sbjct: 709 PVSLVALLHGLCLEGRSQDWNNVIS 733
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 13/243 (5%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
E + T+I Y A++ F + K + +V + L+N + + FK
Sbjct: 522 EFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFK 581
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
++ PNV T ILI CK ++ A ++M +PN VT+ ++ G
Sbjct: 582 QML-SLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNN 640
Query: 234 GD--IENAK----------RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
D I N + FG ++ GW A +Y ++ + + A+ + D+M
Sbjct: 641 VDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKM 700
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G P+ V+ ++ C +S + N++ L + + + + +D +G+
Sbjct: 701 MSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQT 760
Query: 342 EDA 344
+A
Sbjct: 761 SEA 763
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 47/96 (48%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N ++ LC+ V+ A+ + D+M S G +P+ V+ +L G G ++ V L+
Sbjct: 678 NSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLN 737
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+ A Y+ +D ++ G+ ++A ++ + D
Sbjct: 738 ERELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQ 773
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 226/448 (50%), Gaps = 10/448 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTFL 138
+ S + + R FD + +L E++ E CG N + GL +G E A
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMR---ERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 281
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+E + + + L+N L +++R + + + ++ PNV LI ++
Sbjct: 282 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL-DEMSCAELKPNVVVYANLIDGFMRE 340
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ + A +++ EM + G+ PN +T+ ++ G G ++ A + ++ PD TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++++G+ + DA +++ EME+ G+ PN TY +MI C+ + +A +LL++M
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P++ + +I C EG V ACE++ ++ + N +PD +++I L K G++ E
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 520
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+ K F + ERG +P+ TY+ LI G ++ +L A +L M++ G++PN Y L++
Sbjct: 521 STKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLE 580
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV- 496
+ K + ++ + MLD+G + + +LI L SGN +V+S +GSV
Sbjct: 581 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 640
Query: 497 ESDSWNFLLTRI--VSDLDSGAGALDEL 522
+ ++ L++ + +D + G LDE+
Sbjct: 641 DVHVYSSLISGLCKTADREKAFGILDEM 668
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 196/413 (47%), Gaps = 4/413 (0%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N TY +IH L ++ + LL E+ +K ++ +I Y G LA
Sbjct: 429 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAPLISGYCREGNVSLAC 487
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F ++ K NV + N+L+ L + R + F + + ++PN FT + LI
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER-GLLPNEFTYSGLIHG 546
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
K D+E A +++ M G+ PN V + +L Y DIE F +LD+G + D
Sbjct: 547 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 606
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y +L+ G + A +V+ +E NG P+ Y +I CK +A +LD
Sbjct: 607 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 666
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M ++ P+ +ID LC+ G + A ++ +L K +P+ +++I CK G
Sbjct: 667 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 726
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
I A L++E G P Y+ L G + +L +A L ++M +G ++ ++N
Sbjct: 727 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFN 785
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
L+ GFCK G +E +++L ++ +G PN + +I GL E+G EV +
Sbjct: 786 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 838
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 223/474 (47%), Gaps = 17/474 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + L+ R+ N D A ++ A PN TY +++ L + D
Sbjct: 325 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN----KITYDNLVRGLCKMGQMDR 380
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
LL ++ ++ + + +I + + A + +E + +V + + ++
Sbjct: 381 ASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 439
Query: 157 NALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+ L Q+ K DL+ M + PN F LI C++ +V A + D+M
Sbjct: 440 HGLCQSGEPEKASDLLEEMTTKG-----LKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ ++P+L + +++ G G +E + + F + +RG +P+ TY+ L+ GY+K G L
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 554
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A +++ M D G++PN+V Y ++E++ K + + ML + + + + +I
Sbjct: 555 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 614
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
L G +E A + + + +PD + S++I LCK +A + DE ++G
Sbjct: 615 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 674
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++ YN LI G+C+S +++ A +++ ++ KG+ PN TY LI G CK+G+ +
Sbjct: 675 PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYL 734
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
EML G P+ +S+L G +G+ + ++ G S+N L+
Sbjct: 735 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV 788
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 182/403 (45%), Gaps = 24/403 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +IH + ++ E L+ + + +K + ++I ++ +Y + E T
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRM-LDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V R L++ L + + + + K VP+V + LI LC
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL-SGIEKNGSVPDVHVYSSLISGLC 653
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K D E A +LDEM G+ PN+V + ++ G GDI A+ VF IL +G VP+
Sbjct: 654 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 713
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+DG K+G +++A + +EM G+ P+ Y V+ +A L+++M
Sbjct: 714 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 773
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
R + S+ ++D C+ GK+++ +L ++ + +P+ II L + GK+
Sbjct: 774 FLRGHASISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832
Query: 377 WEAKKLFDEFER--------------------GSIPSLLTYNTLIAGMCESAELTEAGRL 416
E +F E ++ G IP L + +I C+ L +A L
Sbjct: 833 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALML 891
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
D +V K +Y ++ C+ G E + +L+EM +G
Sbjct: 892 RDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 143/371 (38%), Gaps = 101/371 (27%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLM 171
++ +I N +G E A + IEK V ++L++ L + K + ++ M
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K V PN+ N LI LCK D+ A V + + + G+VPN VT+T+++ G
Sbjct: 669 SKKG-----VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVL------------------------------ 261
GDI NA ++ ++L G PDA Y+VL
Sbjct: 724 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 783
Query: 262 ----MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR------- 310
+DG+ K G++ + +K++ + G+ PN +T +I + K E
Sbjct: 784 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 843
Query: 311 ------------NLLDDMLQRKYVP------------------------------SSALC 328
+L DM+ + +P S+ +
Sbjct: 844 QKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 903
Query: 329 CK----VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
C ++D LC +GK+ +A L K + ++ + ++ I W + I K +F
Sbjct: 904 CSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHILN-KVVFT 962
Query: 385 EFERGSIPSLL 395
F PSL+
Sbjct: 963 VFA----PSLM 969
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 232/518 (44%), Gaps = 77/518 (14%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+I Q++ AL+ F +A PNF H+ TY ++IHKL R FD V+ LL E+ +
Sbjct: 42 LILDQKSASEALEYFRWASTV-PNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLG 100
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
G+++FIT+IR G A +K + KF+ S++ N++L+ LV+ + D+
Sbjct: 101 APPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVK-EDIDMAR 159
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
++ S V + +T IL+K LC + + ++L + S G+ PN V + T+L
Sbjct: 160 EFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHA 219
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G + A+ + ++ D P+ T+ +L+ GY K G A+ ++++ G P+
Sbjct: 220 LCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPD 275
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
V+ ++E C ++ EA +L+ + + +I C GKV+ K
Sbjct: 276 VVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLK 335
Query: 350 RLLRKNCMPD----NAISS-------------------------------TIIHWLCKEG 374
++ K C+P+ N + S T+I LC E
Sbjct: 336 QMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEE 395
Query: 375 KI---WEAKKLFDEFERGSIPSLLTYNTLIAGMC------ESAE-LTEAGRLWDDMVEK- 423
+I + +L +E + GS + YN++I G+ ESAE LT+ G L+ V++
Sbjct: 396 RIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRS 455
Query: 424 -------------------------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
G P++ YN L+ GF K GN +E + ++ EM+
Sbjct: 456 LMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIAN 515
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CFP ++F+ +I G G K+V TA G V
Sbjct: 516 NCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCV 553
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 171/328 (52%), Gaps = 6/328 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP+V + +++ LC A VL+ + SMG + ++V + T++ G+ G ++
Sbjct: 273 VPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLH 332
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++G +P+ TY VL+ G+ + G L A+ + ++M+ +G++ N VT+ +I C
Sbjct: 333 FLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLC 392
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALC--CKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
++ + ++L+ M + K + +I L ++ +++ E ++ N P
Sbjct: 393 SEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKM--GNLFPR 450
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
S +I CK+G I +AK+++D+ + G IPS+L YN L+ G + + EA L +
Sbjct: 451 AVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMN 510
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+M+ P T+N +I GFC+ G + ++++E++ +GC PN ++S LI+ L +G
Sbjct: 511 EMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNG 570
Query: 479 NEGEVGKVVSMATASGSV-ESDSWNFLL 505
+ + +V G + + WN LL
Sbjct: 571 DLQKAMQVFMQMVDKGILPDLFIWNSLL 598
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 140/276 (50%), Gaps = 11/276 (3%)
Query: 104 LKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
LKQ C N+ + +I + +G +LA+ F ++ ++ + + +TL+ L
Sbjct: 334 LKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCS 393
Query: 162 NKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+R + ++ LM K ++ N +I L KK+ + + L +M ++
Sbjct: 394 EERIEDGFSILELM---EESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNL--F 448
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P V + ++ + +G IE+AKRV+ ++D G +P Y L+ G+ K G + +AV++
Sbjct: 449 PRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVEL 508
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
M+EM N P T+ +I FC+ K A L++D+ R VP++ +ID+LC
Sbjct: 509 MNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCR 568
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
G ++ A +++ +++ K +PD I ++++ L +E
Sbjct: 569 NGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQE 604
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 200/380 (52%), Gaps = 8/380 (2%)
Query: 1 MLRHLHQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLA 60
+ RHL ++ S L + I V+ P P P R+ +I Q + LA
Sbjct: 12 VFRHLTSPLSTSSRFLFYSSSEHEARKPI-VSNPKSPIGS---PTRVQKLIASQSDPLLA 67
Query: 61 LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITV 120
+IF YA + PNF H+ ++ +I KL R R F+ ++ +L + + + GE +F +
Sbjct: 68 KEIFDYASQ-QPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGE-IFTYL 125
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKF 179
I+ Y A PE + TF ++ +FN + LN +L+ LV ++ Y +FK+SR
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH- 184
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V+PN + N+L++A C DD+ A ++ +M +VP++ ++ ++ G+ +G + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ D+L++G+VPD +YT L++ + +L +A K++ M+ G P+ V Y MI
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FC+ ++ +AR +LDDML P+S +I LC++G ++ + + ++ K P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 360 NAISSTIIHWLCKEGKIWEA 379
++S+ ++ C GK+ EA
Sbjct: 365 FSVSNCLVKGFCSFGKVEEA 384
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 3/281 (1%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIK-LGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E F +L+ + P ++D + G L A ++ +GV PN +Y +
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++AFC A L ML+R VP +I C +G+V A EL +L K
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD +T+++ LC++ ++ EA KL + +G P L+ YNT+I G C +A
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ DDM+ G PN +Y LI G C G EG + LEEM+ KG P+ + + L++G
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDS 514
G E VV + +G ++ SD+W ++ I ++ +S
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 416
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 154/293 (52%), Gaps = 4/293 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T +L++A+CK A+ VLDEM + G PN+VT+ I+ G G +++AK +
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ G+ PD +YT ++ G R D + EM D PNEVT+ +++ FC+
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
G A +L M Q P++ LC VI+ +C++G+V+DA + + C PD
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ LC+ G+ AK+L E R + P+ +T+NT I +C+ + +A +L + M
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
E G + TYN L+ GFC G + + + C PN +++ L+ GL
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGL 474
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 190/398 (47%), Gaps = 10/398 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++ + ++ F ++L E++ C N+ + +I GR + A +
Sbjct: 189 TYTVLLEAVCKSSGFGEAMNVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAKEIL 245
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ + Q + S T+L L +R+D V ++F K K VPN T ++L++ C+
Sbjct: 246 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDMLVRFFCR 304
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
VE AI+VL +M G PN ++ +G +++A ++ G PD +
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT ++ G + GR A +++ EM PNEVT+ I C+ +A L++ M
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ ++ C +G+V+ A EL+ L C P+ +T++ LC ++
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLD 481
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +L E + P + +T+N L++ C+ + EA L + M+E G PN+ T+N L+
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 541
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G K N++E + +L ++ KG + ++S +++ L
Sbjct: 542 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 579
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 158/316 (50%), Gaps = 5/316 (1%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P++VT+T +L A V ++ +G P+ TY V+++G + GR+ DA
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++++ + G +P+ V+Y +++ C ++ + + L +M+ +K VP+ ++
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPS 393
C G VE A ++ +++ + C P+ + + +I+ +CK+G++ +A + G P
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++Y T++ G+C + A L +MV K PN T+N I C+ G ++ I+++E
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRI--VSD 511
M + GC +++ L+ G G ++ + + + ++ LLT +
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPN--TITYTTLLTGLCHAER 479
Query: 512 LDSGAGALDELLVKNC 527
LD+ A L E++ K+C
Sbjct: 480 LDAAAELLAEMIQKDC 495
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 152/342 (44%), Gaps = 11/342 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-- 104
+++ I +Q +D A + G + N + +Y +++ L RA ++ + LL E+
Sbjct: 333 VINAICKQGRVDDAYDFLNNMGMYGCN--PDTISYTTVLRGLCRAGRWEHAKELLPEMVR 390
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
K P + N FI ++ GL E A+K + ++ + + N L++ R
Sbjct: 391 KNCPPNEVTFNTFICILCQKGLI---EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR 447
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D +F N PN T L+ LC + ++ A +L EM N VT
Sbjct: 448 VDSALELFNN----LPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFN 503
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++ + +G +E A + +++ G P+ T+ L+DG K +A++++ +
Sbjct: 504 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 563
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GV + +TY +++ + ++ EA +L + P + K++ LC+ + + A
Sbjct: 564 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 623
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ + ++ CMP+ + +I L EG + EA+ + E
Sbjct: 624 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 665
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 93/170 (54%), Gaps = 1/170 (0%)
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
R+ MLQR PS +++ +C+ +A + + K C P+ + II+
Sbjct: 172 RSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIING 231
Query: 370 LCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
+C+EG++ +AK++ + G P +++Y T++ G+C + + L+ +MV+K PN
Sbjct: 232 MCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN 291
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
T++ML++ FC+ G + I++L++M GC PN T +++I + + G
Sbjct: 292 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQG 341
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 52/93 (55%)
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+G +AE + M+++G +P+V TY +L++ CK E + +L+EM KGC
Sbjct: 160 SGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 219
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
PN +++++I G+ G + ++++ ++ G
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYG 252
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 201/397 (50%), Gaps = 6/397 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNIL 191
AV F + + N N +L +LV++K Y V ++ + + +F+ + PN+ CNIL
Sbjct: 71 AVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTV--LYLSKKMEFRGIKPNLVNCNIL 128
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I C+ + A V ++ MG PN +T TT++ G +G I A ++ G+
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGF 188
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+ +Y L+DG K+G A+ ++ ++ V+PN V Y +I+ CK K +A +
Sbjct: 189 QFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFD 248
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L +M+ + P+ +I GK++DA +L+ +++ +N PD + ++ C
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFC 308
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K GKI A KL DE +RG P+++TY++++ +C++ + +A L + ++G+ PN+
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMH 368
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY +LI G C G ++ I E++L KG ++ ++ G + G E ++S
Sbjct: 369 TYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKM 428
Query: 491 TASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
+G + D+ + L ++ S G + E L + C
Sbjct: 429 EENGCIP-DAKTYELIKL-SLFKKGENDMAEKLHREC 463
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 148/308 (48%), Gaps = 10/308 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+I+ L G+ A+ ++ Q + S TL++ L + + +
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVD 219
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K V PNV + +I +CK V A + EM S G+ PN+VT++ ++ G+ G +
Sbjct: 220 GKL-VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKL 278
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A +F ++ PD T+ +L+D + K G+++ A+K++DEM D G PN VTY +
Sbjct: 279 KDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSI 338
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++A CK + +A LL + + P+ +ID LC GK+EDA +++ LL K
Sbjct: 339 LDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGY 398
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGR 415
+ + CK+G EA L + E G IP TY + + + E
Sbjct: 399 DITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGE------ 452
Query: 416 LWDDMVEK 423
+DM EK
Sbjct: 453 --NDMAEK 458
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 135/270 (50%), Gaps = 1/270 (0%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
NL+ +++ + D+++A +F +L + P A + ++ +K + +
Sbjct: 51 NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME G++PN V ++I FC+ A ++ +L+ Y P++ +I LC +
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
G++ A +L+ + T+I LCK G+ A L + + P+++ Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+T+I GMC+ + +A L+ +MV KG+ PNV TY+ LI GF +G K+ + + +M+
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ P+ +F++L++ +SG K+V
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLV 320
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 100/241 (41%), Gaps = 37/241 (15%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y +II + + + + L +E+ I + +I + G+ + AV
Sbjct: 226 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK-GISPNVVTYSALISGFFTVGKLKDAVDL 284
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ N++ V + N L++ ++ + L + H PN+ T + ++ ALC
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYA-LKLVDEMHDRGQPPNIVTYSSILDALC 343
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW----- 251
K V+ A+ +L ++ G+ PN+ T+T ++ G G +E+A+ +F D+L +G+
Sbjct: 344 KTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVV 403
Query: 252 ------------------------------VPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+PDA TY ++ K G A K+ E
Sbjct: 404 TYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHREC 463
Query: 282 E 282
E
Sbjct: 464 E 464
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 164/294 (55%), Gaps = 5/294 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P V T L++ LC+ + A +L +P + N+V T++GG + G + A
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATE 332
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ + +G PDA TY++LM G KLGR+ AV+++ EME G PN VTY +++ +FC
Sbjct: 333 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 392
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + R LL++M + +S +I LC++G++++A L + + + C PD
Sbjct: 393 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 452
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+TII+ LC ++ EA+ +F+ E G + + +TYNT+I + +A RL +M
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G +V +YN LI+ CK GN + +LEEM +KG PN S+++LI L
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 172/332 (51%), Gaps = 5/332 (1%)
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+F VQ S RS N +L+ L + + +++ H+ +V P FT + +ALC+
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A+ +L M G VP+ V + T++ +G + A + ++L G D T+
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G LGR+ +A +++D M G P +TYG +++ C+ +++ EAR +L + +
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
V L VI EGK+ +A EL++ + K C PD S ++H LCK G+I A
Sbjct: 311 VV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+L E E +G P+++TY ++ C++ + L ++M KG+ N YN +I
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
CK G E + +++EM +GC P+ S++ +I
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTII 458
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 156/291 (53%), Gaps = 1/291 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T +IL+ LCK + A+R+L EM G PN+VT+T +L + G ++ + +
Sbjct: 344 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 403
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ +G ++ Y ++ K GR+ +A+ ++ EM G P+ +Y +I C
Sbjct: 404 LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCN 463
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA ++ +++L+ V + +I L +G+ +DA L K ++ C D
Sbjct: 464 NEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVS 523
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I +CK+G + + L +E E+G P+ ++YN LI+ +C+ + +A L M+
Sbjct: 524 YNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML 583
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+G+ P++ TYN LI G CK+G + +LE++ ++ P+ ++++LI
Sbjct: 584 NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 24/361 (6%)
Query: 102 TELKQNPEIK-CGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
TEL + +K C + I +GL GR AV+ +EK +V + +L++
Sbjct: 331 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 390
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+N +D + + K + N N +I ALCK ++ A+ ++ EM S G P
Sbjct: 391 FCKNGMWDDTRALLEEMSAKGLTL-NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 449
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++ ++ TI+ +E A+ +F ++L+ G V + TY ++ ++ GR DAV++
Sbjct: 450 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 509
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM +G + V+Y +I+A CK + LL++M ++ P++ +I LC+E
Sbjct: 510 KEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKE 569
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+V DA EL K++L + PD +T+I+ LCK G + A L ++ ++ P ++TY
Sbjct: 570 RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 629
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N LI+ C+ RL DD N + C +G+ RI++ + D
Sbjct: 630 NILISWHCKV-------RLLDDA--------AMLLNRAMAAVCPVGDR----RIMQILPD 670
Query: 458 K 458
K
Sbjct: 671 K 671
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 2/284 (0%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
F+ N TY ++H + +D +LL E+ + + +I GR +
Sbjct: 376 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK-GLTLNSQGYNGMIYALCKDGRMDE 434
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ + + S NT++ L N++ + MF+N + VV N T N +I
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE-GVVANGITYNTII 493
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
AL + + A+R+ EM G ++V++ ++ G+++ + + ++ ++G
Sbjct: 494 HALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIK 553
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ +Y +L+ K R+ DA+++ +M + G+ P+ VTY +I CK A NL
Sbjct: 554 PNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNL 613
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
L+ + P +I C+ ++DA L R + C
Sbjct: 614 LEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 200/403 (49%), Gaps = 11/403 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ + +A+ + ++ V +L +++ L I +I + + A T +I
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI-MINCFCRCRKLSYAFSTMGKI 149
Query: 141 EKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
K + NTLLN L R +LV M + HK P + T N L+ LC
Sbjct: 150 MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG-HK----PTLITLNTLVNGLC 204
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
V A+ ++D M G PN VT+ +L G A + + +R DA
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y++++DG K G L +A + +EME G + + +TY +I FC + + LL DM
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++RK P+ +ID +EGK+ +A +L K ++++ P+ +++I CKE ++
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 377 WEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA ++ D +G P ++T+N LI G C++ + + L+ +M +GV N TYN L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+QGFC+ G + ++ +EM+ + P+ S+ +L++GL ++G
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 197/406 (48%), Gaps = 4/406 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F N TY +++ + ++ LL ++++ IK + +I G + A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
F +E + + + NTL+ R+D + ++ K K+ PNV T ++LI
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD-MIKRKISPNVVTFSVLID 341
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+ K+ + A ++L EM G+ PN +T+ +++ G+ +E A ++ ++ +G P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T+ +L++GY K R+ D +++ EM GV N VTY +++ FC+ K A+ L
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M+ R+ P ++D LC+ G++E A E++ ++ + D I IIH +C
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
K+ +A LF +G YN +I+ +C L++A L+ M E+G P+ TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
N+LI+ +A ++EEM G FP S ++ + SG
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSG 626
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 180/349 (51%), Gaps = 3/349 (0%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
R++ + L + LV K D V L F++ + +P V N L A+ K E +
Sbjct: 52 RNLSYRDKLSSGLVGIKADDAVDL-FRDMIQS-RPLPTVIDFNRLFSAIAKTKQYELVLA 109
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+ +M S G+ ++ T + ++ + + A G I+ G+ PD + L++G
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
R+++A++++D M + G +P +T ++ C K +A L+D M++ + P+
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
V++++C+ G+ A EL +++ +N D S II LCK+G + A LF+E
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 387 E-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E +G ++TYNTLI G C + + +L DM+++ + PNV T+++LI F K G
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+E ++L+EM+ +G PN +++ LI+G + E ++V + + G
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 189/370 (51%), Gaps = 4/370 (1%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNV 185
+G+ LA++ ++E+ N++ + +++ L ++ D +F K FK ++
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADI 298
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N LI C + ++L +M + PN+VT + ++ +V G + A ++ +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ RG P+ TY L+DG+ K RL +A++++D M G +P+ +T+ ++I +CK +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ L +M R + ++ ++ C+ GK+E A +L++ ++ + PD
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ LC G++ +A ++F + E+ + + Y +I GMC ++++ +A L+ + KG
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
V+ + YN++I C+ + + + +M ++G P++ ++++LI +
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 485 KVVSMATASG 494
+++ +SG
Sbjct: 599 ELIEEMKSSG 608
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 4/226 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ +I+ +A D L E+ I + T+++ + +G+ E+A K F
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF-KNSRHKFKVVPNVFTCNILIKALCKK 198
+ V+ + S LL+ L N + +F K + K ++ ++ I+I +C
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM--IIIHGMCNA 521
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V+ A + +P G+ + + ++ + + A +F + + G PD TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+L+ ++ T A ++++EM+ +G + T ++I G+
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 190/386 (49%), Gaps = 25/386 (6%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
R V S N L+ LV+N + + H+ V PN +T NI++ LCK+ +
Sbjct: 319 RRVESYNRWLSGLVRNGMVGEAQELLREMAHE-GVQPNSYTYNIIVDGLCKEGKAFDVRK 377
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
V D + S M P++VT+T++L Y G+ A R+ ++ +G P++ TY VL+
Sbjct: 378 VEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLW 437
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM---------- 316
K GR+T+A ++++ M + G + + ++I+ C+ K A +++D M
Sbjct: 438 KAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGR 497
Query: 317 -------------LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
++ +P ++ LC+EG+ ++A + ++ K+ PD+ +
Sbjct: 498 LGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLY 557
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T IH CK GK A K+ + E+ G PS TYN LI G E E +L +M
Sbjct: 558 DTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKG 617
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KG+ PNV TYN LI+ FC+ G + + +L+EML PN TSF LLI+ ++ +
Sbjct: 618 KGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSA 677
Query: 483 VGKVVSMATASGSVESDSWNFLLTRI 508
+V + ++ + ++ + T++
Sbjct: 678 AQRVFDASLSTCGQKEVLYSLMCTQL 703
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 180/354 (50%), Gaps = 33/354 (9%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N LL A +Q R+DLV ++K+ P+VFT NIL++ALC +E A RV D MP
Sbjct: 119 NRLLLAALQEARFDLVESLYKDLLLS-GAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177
Query: 213 -----SMGMVP----------------------NLVTHTTILGGYVWRGDIENAKRVFGD 245
S G++ NLV T++ G+ G ++ A+R+
Sbjct: 178 ERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVER 237
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN---GV-EPNEVTYGVMIEAFC 301
+ D G P+ T+ + K GR+ DA ++ ++M++ G+ P++VT+ VM+ FC
Sbjct: 238 MRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFC 297
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ EAR L+D M ++ + + L G V +A EL + + + P++
Sbjct: 298 EAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSY 357
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ I+ LCKEGK ++ +K+ D + G + P ++TY +L+ C A R+ D+M
Sbjct: 358 TYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEM 417
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+KG PN FTYN+L+Q K G E R+LE M +KG + S +++I+GL
Sbjct: 418 AQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGL 471
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 192/403 (47%), Gaps = 27/403 (6%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
TV+ + G+ + A + R+ + +V + N ++AL + R + +F + + K
Sbjct: 217 TVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEK 276
Query: 179 FK---VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
++ P+ T ++++ C+ V+ A ++D M G + + ++ L G V G
Sbjct: 277 WERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGM 336
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A+ + ++ G P++ TY +++DG K G+ D KV D ++ + P+ VTY
Sbjct: 337 VGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTS 396
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ A+C + A +LD+M Q+ P+S ++ L + G++ +A L +R+ K
Sbjct: 397 LLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKG 456
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGS-----------------------I 391
D A + II LC+ K+ A + D + GS +
Sbjct: 457 YSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCL 516
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P +TY+TL++ +C+ EA + +M+ K + P+ Y+ I G+CK G +++
Sbjct: 517 PDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKV 576
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L +M KGC P+ +++LLI G E N E+ K++S G
Sbjct: 577 LRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKG 619
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 197/463 (42%), Gaps = 35/463 (7%)
Query: 71 HPNFSHNYDTYHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYGLA 127
H N TY+ I+ L + +AFD VE + P++ + +++ Y
Sbjct: 349 HEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVT----YTSLLHAYCSE 404
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G A + + + + + N LL +L + R + + K + + +
Sbjct: 405 GNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSL-DTAS 463
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMV-----------------------PNLVTHT 224
CNI+I LC+ + ++ A+ ++D M + G + P+ +T++
Sbjct: 464 CNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYS 523
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T++ G + AK+ +++ + PD+ Y + GY K G+ + AVKV+ +ME
Sbjct: 524 TLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKK 583
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G +P+ TY ++I F + S E L+ +M + P+ +I CE G V A
Sbjct: 584 GCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKA 643
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGM 404
L +L+ +P+ +I CK A+++FD + Y+ + +
Sbjct: 644 MPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVLYSLMCTQL 703
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
EA + + ++E + + F Y +I+G CK+ G R+L+ ++ KG +
Sbjct: 704 STYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDP 763
Query: 465 TSFSLLIEGLYESGNEGEVG----KVVSMATASGSVESDSWNF 503
+F +I+ L E G + V K++ MA + + S F
Sbjct: 764 AAFMPVIDALSERGKKQHVDMLSQKMMEMAERDNGLAAPSGEF 806
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN L+ + A L+ D++ G P+VFT N+L+Q C G + R+ + M
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGE-VGKVVSMAT 491
++ N+ SF +L G +G + +G + SM T
Sbjct: 178 ER----NEFSFGILARGYCRAGRSMDALGVLDSMPT 209
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 219/427 (51%), Gaps = 20/427 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQXXKAETLVRQLXKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSA 440
Query: 467 FSLLIEG 473
++ L++
Sbjct: 441 YNSLVQS 447
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 2/299 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I+ L + + A +L +MP G+ + ++ Y G ++ + ++F + + G
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+Y L ++ GR A + ++M G+EP T+ VMI F K A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+DM R+ P +I+ K+E+A + + + +N P +T+I
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
++ +A +L +E + I P+ +TY+TL+ G+C + +++EA + +M++K + P
Sbjct: 231 VSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD 290
Query: 430 FTYNM-LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ M LI CK GN +L+ M+ + LIE + G + K++
Sbjct: 291 NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLL 349
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 44/312 (14%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N TH I+ + +A+ + D+ +G D + +++D Y K G + ++VK+
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME+ GVE +Y + + + + M+ ++Y
Sbjct: 104 QKMEELGVERTIKSYNALFKVILRRGRY---------MMAKRY----------------- 137
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+ ++L + P + +I GK+ A + F++ + I P ++TY
Sbjct: 138 ---------FNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTY 188
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I G ++ EA + + +M + +EP V TY LI+G+ + + +R++EEM
Sbjct: 189 NTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG 248
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------D 511
G PN ++S L+ GL + E ++ +D N + R++S +
Sbjct: 249 FGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD--NSIFMRLISSHCKSGN 306
Query: 512 LDSGAGALDELL 523
LD+ A L ++
Sbjct: 307 LDAAADVLKAMI 318
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 220/471 (46%), Gaps = 49/471 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ +F++ ++D A +H S + TY+SII L++A+A D
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEM--LDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+LT + N F +++ Y +G+ E A+ F ++ ++
Sbjct: 67 EVLT-------VMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE---------- 109
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
P+V T N L+ LCK A ++ D M G+
Sbjct: 110 --------------------------PDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGL 143
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++ T+ T+L GY +G + + ++ G D + +L+ Y K ++ + V
Sbjct: 144 KPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVL 203
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V +M G+ PN V Y +I+ CK + +A + M+ + P+ + +I LC
Sbjct: 204 VFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALC 263
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLL 395
K E A EL +L + P+ +TI+ LCKEG++ E+KKLFD G P ++
Sbjct: 264 TYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVI 323
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY+TLI G C + ++ A +L MV G++P+ TY+ LI G+CKI ++ + + +EM
Sbjct: 324 TYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEM 383
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLL 505
G P+ ++++++ GL+ + ++ + T SG+ +E ++N +L
Sbjct: 384 ESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 10/246 (4%)
Query: 281 MEDNG-VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
M D+G P+ V+Y +I+ K +A +ML R+ P + +I L +
Sbjct: 1 MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN 398
++ A E+ ++ NC N+ I+H C G+ +A +F + G P ++TYN
Sbjct: 61 AMDRAMEVLTVMVMPNCFTYNS----IMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
+L+ +C++ + TEA +++D MV++G++P++ TY L+ G+ G E +L M+
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGA 518
G + F++LI + EV V S G + ++ N+ R V D G
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG-LTPNAVNY---RTVIDGLCKLGR 232
Query: 519 LDELLV 524
LD+ ++
Sbjct: 233 LDDAML 238
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E A + I + ++ NT+L++L + R +F H V P+V T +
Sbjct: 269 EKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGH-IGVNPDVITYST 327
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI C ++GA+++L M S+G+ P+ VT++T++ GY +E+A +F ++ G
Sbjct: 328 LIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNG 387
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
PD TY +++ G + R A ++ + ++G + TY +++ F K
Sbjct: 388 VNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAK 439
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 217/460 (47%), Gaps = 69/460 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
T++ +I L + DA L E+ PE C N F ++R Y AG + ++
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEM---PEKGCKPNEFTFGILVRGYCKAGLTDKGLELL 205
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+E F V + NT++++ + R D M + R + +VP++ T N I ALCK
Sbjct: 206 NAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE-GLVPDIVTFNSRISALCK 264
Query: 198 KDDVEGAIRVLDEM---PSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDI------- 246
+ V A R+ +M +G+ PN +T+ +L G+ G +E+AK +F I
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 247 ----------------------------LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
D+G P +Y +LMDG KLG L+DA ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
M+ NGV P+ VTYG ++ +C K A++LL +M++ +P++ C ++ L +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK----------------- 381
G++ +A EL +++ K D + I+ LC G++ +A +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 382 -----LFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
L D+ E +P L+TY+TL+ G+C++ EA L+ +M+ + ++P+ YN+
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I FCK G R+L++M KGC + +++ LI GL
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 174/342 (50%), Gaps = 7/342 (2%)
Query: 144 NVQRS-VRSLNTLLNALVQNKRYDLVHLMFKNSRHKF-KVVPNVFTCNILIKALCKKDDV 201
++Q++ + SL ++++ ++ D F+ R +F + P+V+ N+L+++ K+ V
Sbjct: 69 SIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRV 128
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
E + +M G+ P T ++ ++ A+ +F ++ ++G P+ T+ +L
Sbjct: 129 EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGIL 188
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ GY K G +++++ ME GV PN+V Y ++ +FC+ ++ ++ +++ M +
Sbjct: 189 VRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTIIHWLCKEGKIW 377
VP I LC+EGKV DA ++ + + P++ + ++ CK G +
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+AK LF+ E + SL +YN + G+ + EA + M +KG+ P++++YN+L+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G CK+G + I+ M G P+ ++ L+ G G
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 183/404 (45%), Gaps = 38/404 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++ Y G+ + A + + N + + N LL++L + R + + K
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM----------------------- 216
+ V TCNI++ LC +++ AI ++ M G
Sbjct: 462 YGLDTV-TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+P+L+T++T+L G G AK +F +++ PD+ Y + + + K G+++ A +
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V+ +ME G + TY +I + E L+D+M ++ P+ I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-----ERGSI 391
E KVEDA L +++KN P+ +I CK A+++F+ ++ +
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
SL+ +N L+A + +L +A L + ++++G E F Y L++ CK + I
Sbjct: 701 YSLM-FNELLA----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG----KVVSMAT 491
L +M+D+G + + +I+GL + GN+ E K++ MA+
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P T+N LI +C+S+ + A L+D+M EKG +PN FT+ +L++G+CK G +G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +L M G PNK ++ ++ G + K+V G V
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV 249
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
PS L +++ +E +VE L+K ++ P + +I LC + A++L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG-RLWDDMVEKGVEPNVFTYNMLIQGFC 440
FDE E+G P+ T+ L+ G C+ A LT+ G L + M GV PN YN ++ FC
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCK-AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+ G + +++E+M ++G P+ +F+ I L + G + ++ S
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 221/434 (50%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ + + ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLXKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 193/359 (53%), Gaps = 3/359 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T I Y G+ + AV FL++ + V +V + N L++ L ++ R + LMFK
Sbjct: 244 YATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEA-LMFKGRM 302
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ KV P++ T IL+ L K + + A VL EM S G PN ++ GY +G++
Sbjct: 303 VENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNM 362
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A RV D+ +G P+A T+ L+ G+ + ++ A +V++ + N + NE +
Sbjct: 363 DDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYV 422
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ CK K A ++ +L R + +L ++ LC+ GK +A +LW RL K
Sbjct: 423 LHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKG 482
Query: 357 MPDNAISS-TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ N +S +++ LC+ G + E + E ERG + ++YNTLI G C+S ++ EA
Sbjct: 483 LAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAF 542
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+L + M+++G +P+ +TYN L++G G + R+L E D G PN +++L++EG
Sbjct: 543 KLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEG 601
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 174/318 (54%), Gaps = 2/318 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+PNV T N LI LCK +E A+ M + P+LVT+ ++ G V + A
Sbjct: 272 VLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEAN 331
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V ++ +G+ P+ + L+DGY + G + DA++V D+M G++PN VT+ +++ F
Sbjct: 332 SVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGF 391
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ + +A +L+ +L + C V+ LLC+ K + A ++ K LL +N ++
Sbjct: 392 CRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVND 451
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
++ + ++ LCK GK EA L+ ++G + T N L+ G+CE + E +
Sbjct: 452 SLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCK 511
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+MVE+G+ + +YN LI G CK G +E ++ E+M+ +G P+ +++ L++GL + G
Sbjct: 512 EMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKG 571
Query: 479 NEGEVGKVVSMATASGSV 496
+VG+V+ A G V
Sbjct: 572 KMDDVGRVLHEAKDHGVV 589
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQN-----KRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
L+I K + R+++ ++LL LV K + + L F+ + K + N T N L+
Sbjct: 436 LKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKK-GLAANTTTSNALL 494
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC++ ++E V EM G+V + +++ T++ G G IE A ++ ++ +G+
Sbjct: 495 YGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFK 554
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY LM G G++ D +V+ E +D+GV PN TY +M+E +C + A +L
Sbjct: 555 PDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSL 614
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ ++ K S + +I + G +A +L + N P S+IIH +C
Sbjct: 615 FNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCC 674
Query: 373 EGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ EAK +F+E G +P++ Y LI G C+ ++ + + +M ++PN T
Sbjct: 675 NDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKIT 734
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
Y ++I G+CK+GN KE ++L EM+ G P+ ++++L +G Y NE E
Sbjct: 735 YTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKG-YCKENELE 784
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 192/414 (46%), Gaps = 6/414 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ R ++ A Q+ Y S N D ++H L ++ FD+
Sbjct: 379 PNAVTHNTLLQGFCRTNQMEQAEQVLEYL--LSNVLSVNEDACSYVLHLLCKSSKFDSAL 436
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLN 157
++ L IK ++L ++ G+ A+ + R+ +K + + + N LL
Sbjct: 437 KIVKALLLR-NIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLY 495
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L + + V + K + V+ + + N LI CK +E A ++ ++M G
Sbjct: 496 GLCERGNMEEVFPVCKEMVERGLVLDGI-SYNTLIFGCCKSGKIEEAFKLKEKMMKQGFK 554
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+ T+ ++ G +G +++ RV + D G VP+ TY ++++GY R+ +AV +
Sbjct: 555 PDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSL 614
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+++ N VE + V Y ++I A K EA L D M P+ +I +C
Sbjct: 615 FNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCC 674
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
VE+A +++ + + MP+ + +I CK G++ + + + E I P+ +T
Sbjct: 675 NDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKIT 734
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
Y +I G C+ EA +L ++M+ G+ P+ TY +L +G+CK +E ++
Sbjct: 735 YTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 42/365 (11%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P++ +CN L+ +L K +++ + RV D M G++ ++ T+ T + Y G I+ A
Sbjct: 202 VFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAV 261
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + + G +P+ TY L+DG K GRL +A+ M +N V P+ VTYG+++
Sbjct: 262 GLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGL 321
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD- 359
K +K EA ++L +M + + P+ + +ID +G ++DA + + K P+
Sbjct: 322 VKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNA 381
Query: 360 ----------------------------NAIS------STIIHWLCKEGKIWEAKKLFDE 385
N +S S ++H LCK K A K+
Sbjct: 382 VTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKA 441
Query: 386 FERGSIP---SLLTYNTLIAGMCESAELTEAGRLWDDMVE-KGVEPNVFTYNMLIQGFCK 441
+I SLLT L+ G+C+ + EA LW + + KG+ N T N L+ G C+
Sbjct: 442 LLLRNIKVNDSLLTL--LVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCE 499
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDS 500
GN +E + +EM+++G + S++ LI G +SG E K+ G ++ +
Sbjct: 500 RGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYT 559
Query: 501 WNFLL 505
+NFL+
Sbjct: 560 YNFLM 564
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 143/298 (47%), Gaps = 4/298 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEM---PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
++LI LC + G D S G+ P+L + ++ V ++ + RVF
Sbjct: 172 DLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDA 231
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G + D TY ++ Y K G++ +AV + +M + GV PN VTY +I+ CK +
Sbjct: 232 MCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGR 291
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA M++ K PS +++ L + K ++A + + K P+ + +
Sbjct: 292 LEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNA 351
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I ++G + +A ++ D+ +G P+ +T+NTL+ G C + ++ +A ++ + ++
Sbjct: 352 LIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNV 411
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ N + ++ CK ++I++ +L + N + +LL+ GL + G E
Sbjct: 412 LSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLE 469
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 164/294 (55%), Gaps = 5/294 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P V T L++ LC+ + A +L +P + N+V T++GG + G + A
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATE 316
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ + +G PDA TY++LM G KLGR+ AV+++ EME G PN VTY +++ +FC
Sbjct: 317 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 376
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + R LL++M + +S +I LC++G++++A L + + + C PD
Sbjct: 377 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 436
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+TII+ LC ++ EA+ +F+ E G + + +TYNT+I + +A RL +M
Sbjct: 437 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 496
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G +V +YN LI+ CK GN + +LEEM +KG PN S+++LI L
Sbjct: 497 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 550
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 165/323 (51%), Gaps = 9/323 (2%)
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
R ++ L + +R+ L M H+ +V P FT + +ALC+ + A+ +L
Sbjct: 128 RPVSASQGGLPRARRFALYRRMV----HRDRVPPTTFTFGVAARALCRLGRADEALALLR 183
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M G VP+ V + T++ +G + A + ++L G D T+ ++ G LG
Sbjct: 184 GMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLG 243
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R+ +A +++D M G P +TYG +++ C+ +++ EAR +L + + V L
Sbjct: 244 RVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LFN 299
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-R 388
VI EGK+ +A EL++ + K C PD S ++H LCK G+I A +L E E +
Sbjct: 300 TVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKK 359
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P+++TY ++ C++ + L ++M KG+ N YN +I CK G E
Sbjct: 360 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 419
Query: 449 IRILEEMLDKGCFPNKTSFSLLI 471
+ +++EM +GC P+ S++ +I
Sbjct: 420 MGLIQEMRSQGCNPDICSYNTII 442
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 156/291 (53%), Gaps = 1/291 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T +IL+ LCK + A+R+L EM G PN+VT+T +L + G ++ + +
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 387
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ +G ++ Y ++ K GR+ +A+ ++ EM G P+ +Y +I C
Sbjct: 388 LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCN 447
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA ++ +++L+ V + +I L +G+ +DA L K ++ C D
Sbjct: 448 NEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVS 507
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I +CK+G + + L +E E+G P+ ++YN LI+ +C+ + +A L M+
Sbjct: 508 YNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML 567
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+G+ P++ TYN LI G CK+G + +LE++ ++ P+ ++++LI
Sbjct: 568 NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 175/373 (46%), Gaps = 35/373 (9%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + V + + AL + R D + L+ +RH VP+ +I ALC +
Sbjct: 150 VHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHG--CVPDAVLYQTVIHALCDQ 207
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A +L+EM MG ++ T ++ G G + A R+ ++ +G +P TY
Sbjct: 208 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 267
Query: 259 TVLMDGYIKL-------------------------------GRLTDAVKVMDEMEDNGVE 287
L+ G ++ G+L +A ++ + M G +
Sbjct: 268 GFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ 327
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ TY +++ CK + G A LL +M ++ + P+ V+ C+ G +D L
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 387
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCE 406
+ + K ++ + +I+ LCK+G++ EA L E +G P + +YNT+I +C
Sbjct: 388 LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCN 447
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ ++ EA ++++++E+GV N TYN +I + G ++ +R+ +EM+ GC + S
Sbjct: 448 NEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVS 507
Query: 467 FSLLIEGLYESGN 479
++ LI+ + + GN
Sbjct: 508 YNGLIKAMCKDGN 520
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 24/361 (6%)
Query: 102 TELKQNPEIK-CGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
TEL + +K C + I +GL GR AV+ +EK +V + +L++
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+N +D + + K + N N +I ALCK ++ A+ ++ EM S G P
Sbjct: 375 FCKNGMWDDTRALLEEMSAKGLTL-NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 433
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++ ++ TI+ +E A+ +F ++L+ G V + TY ++ ++ GR DAV++
Sbjct: 434 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 493
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM +G + V+Y +I+A CK + LL++M ++ P++ +I LC+E
Sbjct: 494 KEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKE 553
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+V DA EL K++L + PD +T+I+ LCK G + A L ++ ++ P ++TY
Sbjct: 554 RRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITY 613
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N LI+ C+ RL DD N + C +G+ RI++ + D
Sbjct: 614 NILISWHCKV-------RLLDDA--------AMLLNRAMAAVCPVGDR----RIMQILPD 654
Query: 458 K 458
K
Sbjct: 655 K 655
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 2/284 (0%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
F+ N TY ++H + +D +LL E+ + + +I GR +
Sbjct: 360 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK-GLTLNSQGYNGMIYALCKDGRMDE 418
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ + + S NT++ L N++ + MF+N + VV N T N +I
Sbjct: 419 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE-GVVANGITYNTII 477
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
AL + + A+R+ EM G ++V++ ++ G+++ + + ++ ++G
Sbjct: 478 HALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIK 537
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ +Y +L+ K R+ DA+++ +M + G+ P+ VTY +I CK A NL
Sbjct: 538 PNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNL 597
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
L+ + P +I C+ ++DA L R + C
Sbjct: 598 LEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 641
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 228/447 (51%), Gaps = 6/447 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R +++L L+ F +A K + S N +Y S++ L+R R F +E L E+K I
Sbjct: 73 RINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKETIPT 132
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNKRYDLVHLM 171
E L V+ Y G + A++ + + K N S + N+LLN LV+++R + H +
Sbjct: 133 REALS-DVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQL 191
Query: 172 FK---NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+ + + + + +T +I++K LC K +E I++++ G VPN+V + T++
Sbjct: 192 YDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLID 251
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
GY +G++E+A ++F + +G++P T+ L++G+ K+G ++ EM+D G+
Sbjct: 252 GYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSV 311
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N Y +I+A K +A++ L +M + P +I+ C G+VE+A +L
Sbjct: 312 NVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLL 371
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCES 407
++ +R+ P+ + ++H CK+G+ +A E + +++Y LI G+ +
Sbjct: 372 EQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVA 431
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
E+ A + D M+ +G+ P+ YN+L+ G K G +L EMLD+ P+ +
Sbjct: 432 GEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVY 491
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ L++G GN E K+ + G
Sbjct: 492 ATLVDGFIRHGNLDEAKKLFQLIIEKG 518
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 213/477 (44%), Gaps = 41/477 (8%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL--KQNPEIKCGE 114
+D AL+++H K H + Y +S+++ L + R + L E+ + N + C +
Sbjct: 149 VDKALEVYHGVVKLHNSLPSTY-ACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVD 207
Query: 115 NLFITV-IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
N ++ ++ L GR E +K ++ NTL++ + + + +FK
Sbjct: 208 NYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFK 267
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV---------------- 217
+ K +P + T L+ CK E +L EM G+
Sbjct: 268 KLKMK-GFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKL 326
Query: 218 -------------------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
P+LVT+ T++ + RG++E A+++ + RG P+ TY
Sbjct: 327 GFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTY 386
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
T L+ GY K G T A + EM +G+E + ++YG +I + A + D M+
Sbjct: 387 TPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMN 446
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R +P + + +++ L ++GK+ A + +L +N PD + +T++ + G + E
Sbjct: 447 RGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDE 506
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AKKLF E+G P ++ YN +I G +S + A D M P++FT++ +I
Sbjct: 507 AKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIID 566
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G+ K N ++I M+ + C PN +++ LI G G K+ SM + G
Sbjct: 567 GYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG 623
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 189/402 (47%), Gaps = 3/402 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F T+ S+++ + F+A++ LL E+K + ++ +I G A
Sbjct: 274 FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG-LSVNVQMYNNIIDARYKLGFDIKA 332
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
T + + + + + NTL+N + + + + + + PN T L+
Sbjct: 333 KDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRR-GLAPNKLTYTPLVH 391
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK+ + A L EM + G+ +++++ ++ G V G+++ A + +++RG +P
Sbjct: 392 GYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILP 451
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
DA Y VLM+G K G+L+ A ++ EM D + P+ Y +++ F + EA+ L
Sbjct: 452 DANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLF 511
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++++ P +I + G +++A ++ R + +PD STII K+
Sbjct: 512 QLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQ 571
Query: 374 GKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+ K+F ++ P+++TY +LI G C E A +L+ M G++P+V TY
Sbjct: 572 HNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTY 631
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++LI FCK + + E ML C PN +F L+ G
Sbjct: 632 SILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGF 673
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 177/409 (43%), Gaps = 22/409 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y ++IH L A D ++ + N I N++ ++ G+ +A
Sbjct: 420 SYGALIHGLVVAGEVDTALTIRDRM-MNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTE 478
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ N+ TL++ +++ D +F+ K + P V N++IK K
Sbjct: 479 MLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEK-GLDPGVVGYNVMIKGFSKSG 537
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI +D+M VP++ T +TI+ GYV + ++ ++FG ++ + P+ TYT
Sbjct: 538 MMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYT 597
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++GY + G A K+ M +G++P+ VTY ++I +FCK K G+A + + ML
Sbjct: 598 SLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLIN 657
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
K P+ A +++ + E M ++ S I G W
Sbjct: 658 KCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMI-------GDGWTQ 710
Query: 380 KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K YN ++ +C+ + A +L + M+ G+ + ++ LI G
Sbjct: 711 KA-------------AAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGI 757
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
C GN+KE ++ L++G +SL ++ G E ++
Sbjct: 758 CLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQ 806
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 25/462 (5%)
Query: 32 TPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFH----YAGKFHPN-FSHNYDTYHSIIH 86
TPP WP+ L L ++ +++ AL IF A P+ + + T +
Sbjct: 7 TPP--KWPKTLTADHLHRLVRAERDPRRALAIFDGATAAASTSAPDPITPSPATVSLLTS 64
Query: 87 KLARARAFDAVESLLTELKQN-PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FN 144
+LA A SLL+ + P + E F+ ++R + RP A+ F
Sbjct: 65 RLASAGHLPLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLA 124
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK--KDDVE 202
+ S RS N +L ALV + L + + R P T N+L+KA C +E
Sbjct: 125 LPHSARSYNAVLAALVAHSHLPLARSLLADMR-AAGFAPTAATYNVLLKAHCSDAAAHIE 183
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+R+ +P P++ ++ TI+ G RG + A +F +++ + P TYT ++
Sbjct: 184 DALRLFRNIPK----PDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVI 239
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ G DA+K+ EM GV PN VTY +I+ CKG ++ A LLD M++ K +
Sbjct: 240 HWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKL 299
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P++ VID LC+E + +A E+ R+ + PD + +I LC G+ EA
Sbjct: 300 PNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANY 359
Query: 383 FDEFERGSI-PSLLTY-------NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
DE I P+ +T+ NT++ +C+ EL A +++ + + + T+++
Sbjct: 360 LDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHL 419
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
L++ F K N ++ R++ +ML + C P + ++ +I G +
Sbjct: 420 LVESFSK-NNIEKAARVVLDMLSERCIPERETWDAIISGYWS 460
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 7/233 (3%)
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
A +Y ++ + L A ++ +M G P TY V+++A C S A ++ D
Sbjct: 129 ARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAHC----SDAAAHIED 184
Query: 315 DMLQRKYVPSSALCC--KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ + +P +C +ID LC G++ +A +++ ++ K P +T+IHWL +
Sbjct: 185 ALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAR 244
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG +A K+F E RG P+L+TY++LI G+C+ T A L D MV++ PN T
Sbjct: 245 EGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTIT 304
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
Y+ +I G CK E + +L+ M +G P+ F LI GL ++G E
Sbjct: 305 YSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAA 357
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 17/248 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY ++IH LAR FD + E+ + NL + ++I GR A++
Sbjct: 234 TYTTVIHWLAREGCFDDALKIFHEMGRR---GVSPNLVTYSSLIDGLCKGGRATSALELL 290
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALC 196
R+ K + + +++++ L K + L M R + + P+ LI LC
Sbjct: 291 DRMVKEKKLPNTITYSSVIDGLC--KEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLC 348
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVT-------HTTILGGYVWRGDIENAKRVFGDILDR 249
A LDEM G+ PN VT + T+L +G++ A +V+ R
Sbjct: 349 DAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTR 408
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK-SGE 308
D TT+ +L++ + K + A +V+ +M P T+ +I + KK E
Sbjct: 409 SISTDPTTFHLLVESFSK-NNIEKAARVVLDMLSERCIPERETWDAIISGYWSKKKVRQE 467
Query: 309 ARNLLDDM 316
A+ + D +
Sbjct: 468 AKEIWDHL 475
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 215/445 (48%), Gaps = 46/445 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE---LKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++++ L + + F+ ++ E L+ +P E +++ G+ E A+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS----EAAVSSLVEGLRKRGKIEEALNL 354
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ F V ++ N L+++L + +++ L+F + K + PN T +ILI C
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF-DRMGKIGLRPNDVTYSILIDMFC 413
Query: 197 KKDDVEGAIRVLDEMPSMGMV-----------------------------------PNLV 221
++ ++ A+ L EM G+ P +V
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+T+++GGY +G I A R++ ++ +G P T+T L+ G + G + DAVK+ +EM
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ V+PN VTY VMIE +C+ +A L +M ++ VP + +I LC G+
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
+A L + NC + + ++H C+EGK+ EA + E +RG L+ Y L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G + + L +M ++G++P+ Y +I K G+ KE I + M+++GC
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 461 FPNKTSFSLLIEGLYESG--NEGEV 483
PN+ +++ +I GL ++G NE EV
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEV 738
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 228/497 (45%), Gaps = 54/497 (10%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---------NPE 109
L L+ F++ G H F H+ ++ +IH L +A F SLL L N
Sbjct: 86 LGLRFFNFLG-LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVL 144
Query: 110 IKCGEN-------LFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQ 161
C E F +I++Y + R V F + I K ++ VR+L+ LL+ LV+
Sbjct: 145 FSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVK 204
Query: 162 NKRYDLVHLMFKN--------------------------SRHKFKVVP--------NVFT 187
+ + L +F + SR K + N+
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+LI LCKK V A+ + ++ + P++VT+ T++ G + E + ++L
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ P + L++G K G++ +A+ ++ + D GV PN Y +I++ CKG+K
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L D M + P+ +ID+ C GK++ A ++ +++I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ CK G I A+ E + P+++TY +L+ G C ++ +A RL+ +M KG+
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+++T+ L+ G + G ++ +++ EM + PN+ +++++IEG E G+ + +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 487 VSMATASGSVESDSWNF 503
+ T G V D++++
Sbjct: 565 LKEMTEKGIV-PDTYSY 580
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 211/482 (43%), Gaps = 44/482 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ M R+ LD AL + Y+S+I+ + A E
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFL--GEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+ E+ N +++ + +++ Y G+ A++ + + + S+ + TLL+
Sbjct: 458 GFMAEM-INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 159 LVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L + D V L N ++ V PN T N++I+ C++ D+ A L EM G+V
Sbjct: 517 LFRAGLIRDAVKLF--NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP-DATTYTVLMDGYIKLGRLTDAVK 276
P+ ++ ++ G G AK VF D L +G + YT L+ G+ + G+L +A+
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V EM GV+ + V YGV+I+ K K LL +M R P + +ID
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE--------- 387
+ G ++A +W ++ + C+P+ + +I+ LCK G + EA+ L + +
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 388 ---------------------------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+G + + TYN LI G C + EA L M
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRM 813
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ GV P+ TY +I C+ + K+ I + M +KG P++ +++ LI G +G
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 481 GE 482
G+
Sbjct: 874 GK 875
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+LI K D + +L EM G+ P+ V +T+++ GD + A ++ +++
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G VP+ TYT +++G K G + +A + +M+ PN+VTYG ++ KG+ +
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK 771
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L + + + + ++A +I C +G++E+A EL R++ PD +T+I+
Sbjct: 772 AVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC+ + +A +L++ E+G P + YNTLI G C + E+ +A L ++M+ +G+ PN
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VPN T +I LCK V A + +M + VPN VT+ L + +G+++ K
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKA 772
Query: 242 V-FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V + + +G + + TY +L+ G+ + GR+ +A +++ M +GV P+ +TY MI
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ +A L + M ++ P +I C G++ A EL +LR+ +P+N
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Query: 361 AISST 365
S T
Sbjct: 893 KTSRT 897
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++ N T N+LI+ C++ +E A ++ M G+ P+ +T+TT++ R D++ A
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ + ++G PD Y L+ G G + A ++ +EM G+ PN T
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 222/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLXKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 219/427 (51%), Gaps = 20/427 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLXKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSA 440
Query: 467 FSLLIEG 473
++ L++
Sbjct: 441 YNSLVQS 447
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 2/299 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I+ L + + A +L +MP G+ + ++ Y G ++ + ++F + + G
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+Y L ++ GR A + ++M G+EP T+ VMI F K A
Sbjct: 111 VERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+DM R+ P +I+ K+E+A + + + +N P +T+I
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
++ +A +L +E + I P+ +TY+TL+ G+C + +++EA + +M++K + P
Sbjct: 231 VSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD 290
Query: 430 FTYNM-LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ M LI CK GN +L+ M+ + LIE + G + K++
Sbjct: 291 NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLL 349
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 44/312 (14%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N TH I+ + +A+ + D+ +G D + +++D Y K G + ++VK+
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME+ GVE +Y + + + + M+ ++Y
Sbjct: 104 QKMEELGVERTIKSYNXLFKVILRRGRY---------MMAKRY----------------- 137
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+ ++L + P + +I GK+ A + F++ + I P ++TY
Sbjct: 138 ---------FNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTY 188
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I G ++ EA + + +M + +EP V TY LI+G+ + + +R++EEM
Sbjct: 189 NTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG 248
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------D 511
G PN ++S L+ GL + E ++ +D N + R++S +
Sbjct: 249 FGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD--NSIFMRLISSHCKSGN 306
Query: 512 LDSGAGALDELL 523
LD+ A L ++
Sbjct: 307 LDAAADVLKAMI 318
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 195/423 (46%), Gaps = 11/423 (2%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGE--NLFITVIRNYGLAGRPELA 133
N TY ++ L AR R DA L L + P C ++ ++ G A
Sbjct: 121 NAYTYFPVVRALCARGRIADA----LAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA 176
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILI 192
V+ + V + N +LNA+ D +HL+ F P+V + N ++
Sbjct: 177 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLL--RDLPSFGCEPDVVSYNAVL 234
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K LC +++EM M PN+VT T++ G E V + + G
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y ++DG K G L A ++++ M G++PN V Y +++ C ++ E L
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +M + ++D C+ G V+ EL +++L CMPD +T+I+ CK
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG I EA L G P+ ++Y ++ G+C + +A L M+++G N T
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+N LI CK G ++ I +L++ML GC P+ S+S +I+GL ++G E +++++
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 492 ASG 494
G
Sbjct: 535 NKG 537
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 224/455 (49%), Gaps = 13/455 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDAVESLLTEL 104
+++ I Q ++D AL + + P+F D +Y++++ L A+ + V+ L+ E+
Sbjct: 198 VLNAICDQGSVDKALHLL----RDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 253
Query: 105 KQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ + C N+ F T+I G E + ++ + +R T+++ + +
Sbjct: 254 VR---MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKE 310
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ H + N + + PNV N L+K LC + E +L EM + VT
Sbjct: 311 GHLKVAHEIL-NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
++ + G ++ + +L G +PD TYT +++G+ K G + +AV ++ M
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G +PN ++Y ++++ C ++ +A +L+ M+Q+ + +I+ LC++G VE
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
A EL K++L C PD ST+I L K GK EA +L + +G P+ + Y+++
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ + + + +++D++ + + + YN +I CK G + I L M+ GC
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
PN++++++LI GL G E ++++ + G++
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 156/315 (49%), Gaps = 1/315 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T +++ALC + + A+ VLDEMP G P + IL G +A
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RV D+ RG D ++++ G + A+ ++ ++ G EP+ V+Y +++
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ G + L+++M++ P+ +I LC G E E+ ++ C PD
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CKEG + A ++ + G P+++ YNTL+ G+C + E L +
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + T+N+L+ FC+ G I +LE+ML GC P+ +++ +I G + G
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGL 417
Query: 480 EGEVGKVVSMATASG 494
E ++ TA G
Sbjct: 418 IDEAVMLLKSMTACG 432
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 184/412 (44%), Gaps = 10/412 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFL 138
YH I+ R F + +L +L + + G NL + I + G + A+
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDK---ALHLLR 216
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ F + V S N +L L KR+ V + + + PN+ T N LI LC+
Sbjct: 217 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEE-MVRMACPPNIVTFNTLISYLCRN 275
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
E VL +M G P++ + TI+ G G ++ A + + G P+ Y
Sbjct: 276 GLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCY 335
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ G R + +++ EM D ++VT+ ++++ FC+ LL+ ML
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLV 395
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+P VI+ C+EG +++A L K + C P+ + ++ LC + +
Sbjct: 396 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD 455
Query: 379 AKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ L + + P + +T+NTLI +C+ + +A L M+ G P++ +Y+ +I
Sbjct: 456 AEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 515
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G K G E + +L M++KG PN +S + L EG + KV+ M
Sbjct: 516 GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL---SREGRINKVIQM 564
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 148/309 (47%), Gaps = 7/309 (2%)
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ GY G +E+A+R+ + P+A TY ++ GR+ DA+ V+DEM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G P Y V++EA C+G A +L+D+ R C V++ +C++G V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
A L + L C PD + ++ LC + ++L +E R + P+++T+NTLI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ +C + + M E G P++ Y +I G CK G+ K IL M G
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLLTRIVSD--LDSGAGA 518
PN ++ L++GL + E ++++ M ++ ++N L+ + +D
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 519 LDELLVKNC 527
L+++LV C
Sbjct: 390 LEQMLVHGC 398
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 227/452 (50%), Gaps = 23/452 (5%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEMKGXGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR JL +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVJLKEMMDKYLAPTDNSIFMRLIXSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHXGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L + + GV+ + N LI+G + G+ +L+ ML + K ++
Sbjct: 383 GQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKXAY 441
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
+ L++ Y NE K A +E+D
Sbjct: 442 NSLVQS-YLKKNEPXDAK----AALDSMIEND 468
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 222/434 (51%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F R+E+ V+R+++S + L +++ RY + F N
Sbjct: 86 MIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N+LI VE A R ++M S + P++VT+ T++ GY + A
Sbjct: 145 GIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAAKAETLVRQLLKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
+ L++ Y NE
Sbjct: 441 YDSLVQS-YLKKNE 453
>gi|225466731|ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Vitis vinifera]
Length = 503
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 228/489 (46%), Gaps = 44/489 (8%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
WP+ L P +L MI Q+N AL+IF+ A PN+ HN Y ++I+ L + +
Sbjct: 5 WPRFLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRIAEM 64
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
++ ++KQ+ +C +++F +V++ Y AG + AV F + +FN S NTLL
Sbjct: 65 REVIDQMKQDS-CECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNTLLR 123
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
LV+ + + +F ++V + + N+L+ ALC+ + + A+ V EM
Sbjct: 124 ILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQCCS 183
Query: 218 PNLVTHTTILGGYVWRGDIENAKRV----FGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
P+ ++ ++ G G + A + F I +G D Y L+D G + +
Sbjct: 184 PDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHVEE 243
Query: 274 AVKVMDEMEDNGV------------------EPNEVTYGVMIEAFCKG------------ 303
A++++ ++ G+ E E T G++ EA +G
Sbjct: 244 ALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYSAMA 303
Query: 304 ------KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK-RLLRKNC 356
+K GEA +LD+M R + PS ++ I LC G VE+A ++ K ++ +C
Sbjct: 304 IDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEMVEDSC 363
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAG 414
+P + + ++ LC+EGK A ++ R G + TY+ L+ G+C EA
Sbjct: 364 VPTVRLYNIVLKGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFVEAS 423
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ + M+ + P V TYN LI+G C +G + + LEEM+ +G P + + L+ +
Sbjct: 424 GILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAVSVWDSLVASV 483
Query: 475 YESGNEGEV 483
+ E V
Sbjct: 484 CSNMTEAGV 492
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 44/305 (14%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++K + V+ A+ + +P V + T+L V +E A R+F + G
Sbjct: 86 VMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNTLLRILVKESKLETACRLFLE-HSCG 144
Query: 251 WVPDAT--TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
W + + +LMD ++ R A+ V EM P++ +Y +++ C+ + E
Sbjct: 145 WEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQCCSPDKESYRILMRGLCEDGRLNE 204
Query: 309 ARNLLDDML----QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC-MPDNAIS 363
A +LL M Q+ A ++D LC+ G VE+A E+ ++L+K P
Sbjct: 205 ATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHVEEALEILGKVLKKGLKAPKRCRG 264
Query: 364 STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ + C I K L +E RG +PS+ +Y+ + A L+ +
Sbjct: 265 HLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYSAM------------AIDLYSER-- 310
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KIG A + +L+EM D+G P+ + + I L G E
Sbjct: 311 ------------------KIGEANQ---VLDEMRDRGFKPSLSIYEAKIAALCRCGGVEE 349
Query: 483 VGKVV 487
KV+
Sbjct: 350 AVKVI 354
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 161/313 (51%), Gaps = 3/313 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV + +I LCK V A + EM + + PN++T+ T++ + G + A +
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ + PD T+++L+D K G+ +A ++ M GV PN +Y +MI CK
Sbjct: 208 LHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCK 265
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EA NLL +ML + VP + +ID LC+ G++ A L + + D
Sbjct: 266 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 325
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++ LCK + +A LF + ERG P++ TY LI G+C+ L A L+ ++
Sbjct: 326 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 385
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KG +V+TY ++I G CK G E + I +M D GC PN +F ++I L+E
Sbjct: 386 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 445
Query: 482 EVGKVVSMATASG 494
+ K++ A G
Sbjct: 446 KAEKLLHEMIAKG 458
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 167/353 (47%), Gaps = 34/353 (9%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K PN T L+K LC K +V+ + D++ + N V++ T+L G G+
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A ++ I DR P+ Y+ ++DG K + +A + EM+ + PN +TY +I
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK----------------- 340
AFC + A +LL +M+ + P +ID LC+EGK
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPN 252
Query: 341 ----------------VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
V++A L + +L KN +PD +++I LCK G+I A L +
Sbjct: 253 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 312
Query: 385 EFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E RG ++TY +L+ +C++ L +A L+ M E+G++P ++TY LI G CK G
Sbjct: 313 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 372
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
K + + +L KGC + +++++I GL + G E + S +G +
Sbjct: 373 RLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCI 425
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 165/329 (50%), Gaps = 4/329 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +L +LV+ K Y V + K K + N+ T +ILI C + + +L ++
Sbjct: 13 FNKILGSLVKLKYYLTVISLSKQMDVK-GIEQNLVTLSILINCFCHLGQMAFSFSLLGKI 71
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G PN +T TT++ G +G+++ ++ + + + +Y L++G K G
Sbjct: 72 LKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGET 131
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A+K++ +ED PN V Y +I+ CK K EA +L +M R+ P+ +
Sbjct: 132 RCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTL 191
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I C G++ A L ++ KN PD S +I LCKEGK AK++F + G
Sbjct: 192 ICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGV 249
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P++ +YN +I G+C+ + EA L +M+ K + P+ TYN LI G CK G +
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 309
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++ EM +G + +++ L++ L ++ N
Sbjct: 310 LMNEMHHRGQPADVVTYTSLLDALCKNQN 338
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 153/284 (53%), Gaps = 14/284 (4%)
Query: 148 SVRSLNTLLNALVQNKR----YDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
+V + NTL+ A + + L+H ++ KN + P+V+T +ILI ALCK+ +
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKN------INPDVYTFSILIDALCKEG--K 235
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A ++ M MG+ PN+ ++ ++ G ++ A + ++L + VPD TY L+
Sbjct: 236 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 295
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
DG K GR+T A+ +M+EM G + VTY +++A CK + +A L M +R
Sbjct: 296 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 355
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ +ID LC+ G++++A EL++ LL K C D + +I LCKEG EA +
Sbjct: 356 PTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 415
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ E G IP+ +T+ +I + E E +A +L +M+ KG+
Sbjct: 416 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 8/274 (2%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ ++ +KL + + +M+ G+E N VT ++I FC + + +LL +L
Sbjct: 13 FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ Y P++ ++ LC +G+V+ +++ + + T+++ LCK G+
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 378 EAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A KL E R + P+++ Y+ +I G+C+ + EA L+ +M + + PNV TYN LI
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
FC G +L EM+ K P+ +FS+LI+ L + EG+ K + A V
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK---EGKNAKQIFHAMVQMGV 249
Query: 497 ESD--SWNFLLTRI--VSDLDSGAGALDELLVKN 526
+ S+N ++ + +D L E+L KN
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 283
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 161/370 (43%), Gaps = 28/370 (7%)
Query: 2 LRHLHQKITAPS---------CLLQSI---GGARCSLSTITVTPPIKPWPQRLYPKRLVS 49
L H H K+ A + LL + G RC++ + + P + ++
Sbjct: 99 LLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIID 158
Query: 50 MIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL--- 104
+ + + ++ A ++ A + PN TY+++I A SLL E+
Sbjct: 159 GLCKDKLVNEAYDLYSEMDAREIFPNVI----TYNTLICAFCLAGQLMGAFSLLHEMILK 214
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
NP++ + I L + A + F + + V +V S N ++N L + KR
Sbjct: 215 NINPDV------YTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D + + HK +VP+ T N LI LCK + A+ +++EM G ++VT+T
Sbjct: 269 VDEAMNLLREMLHK-NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 327
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
++L +++ A +F + +RG P TYT L+DG K GRL +A ++ +
Sbjct: 328 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 387
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G + TY VMI CK EA + M +P++ +I L E+ + + A
Sbjct: 388 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 447
Query: 345 CELWKRLLRK 354
+L ++ K
Sbjct: 448 EKLLHEMIAK 457
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ +N ++ + + L M KG+E N+ T ++LI FC +G +L
Sbjct: 10 IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEV----GKVVSMATASGSVE 497
++L G PN +++ L++GL G ++ KVV+ A + V
Sbjct: 70 KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVS 117
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 197/404 (48%), Gaps = 17/404 (4%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRN-------YGLAGRPE 131
+TY ++I+ +A F+AV+ LLTE+ G N+ + V N YGL +
Sbjct: 272 ETYGALINGFCKAGEFEAVDQLLTEMAAR-----GLNMNVKVFNNVIDAEFKYGLVTK-- 324
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A +T R+ + + + NT++N + R + ++ + ++PN F+ L
Sbjct: 325 -AAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKER-GLLPNKFSYTPL 382
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ A CK+ D A +L + +G P+LV++ + G V G+I+ A V ++++G
Sbjct: 383 MHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGV 442
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PDA Y VLM G K GR ++ EM D V+P+ + +++ F + + EA
Sbjct: 443 FPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIK 502
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ ++++ P +I C+ GK+ DA ++ + PD ST+I
Sbjct: 503 IFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYV 562
Query: 372 KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K+ + A K+F + + P+++TY +LI G C+ A++ A +++ M + PNV
Sbjct: 563 KQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVV 622
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
TY L+ GF K G ++ I E ML GC PN +F LI GL
Sbjct: 623 TYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL 666
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 218/451 (48%), Gaps = 8/451 (1%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+I R + +LAL+ F +A + S + + S++ LA R F +E +L +K
Sbjct: 63 VIDRVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQ-H 121
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYD-- 166
+K F +I YG +G + A++ F + E N +V + N+LLN LV++ + D
Sbjct: 122 LKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVA 181
Query: 167 --LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
L M + VV N +T +I++K LC +E R++ + G VP++V +
Sbjct: 182 LQLYDKMLQTDDGTGAVVDN-YTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYN 240
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
I+ GY +GD++ A R ++ +G +P TY L++G+ K G +++ EM
Sbjct: 241 MIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAAR 300
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ N + +I+A K +A + M + P +I+ C+ G++++A
Sbjct: 301 GLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEA 360
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGK-IWEAKKLFDEFERGSIPSLLTYNTLIAG 403
E ++ + +P+ + ++H CK+G + A LF E G P L++Y I G
Sbjct: 361 DEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHG 420
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ E+ A + + M+EKGV P+ YN+L+ G CK G +L EMLD+ P+
Sbjct: 421 VVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPD 480
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
F+ L++G +G E K+ + G
Sbjct: 481 VYVFATLMDGFIRNGELDEAIKIFKVIIRKG 511
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 171/371 (46%), Gaps = 16/371 (4%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A RI + + + S ++ +V + D V LM + + V P+ N+L+
Sbjct: 395 AAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEID-VALMVREKMMEKGVFPDAQIYNVLM 453
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK +L EM + P++ T++ G++ G+++ A ++F I+ +G
Sbjct: 454 SGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVD 513
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P Y ++ G+ K G++TDA+ +++M++ P+E TY +I+ + K A +
Sbjct: 514 PGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKM 573
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M++ K+ P+ +I+ C++ + A ++++ + + +P+ +T++ K
Sbjct: 574 FGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFK 633
Query: 373 EGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAE----LTEAGRLWDD-------- 419
GK +A +F+ G P+ T++ LI G+ +A + E + ++
Sbjct: 634 AGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFF 693
Query: 420 --MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M+ +G + + YN +I CK G +L +ML KG + F+ ++ GL
Sbjct: 694 TMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHK 753
Query: 478 GNEGEVGKVVS 488
G E ++S
Sbjct: 754 GKSKEWRNIIS 764
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 112/270 (41%), Gaps = 16/270 (5%)
Query: 25 SLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSI 84
+LS + + P ++ +Q ++ AL++F K F N TY S+
Sbjct: 535 ALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKH--KFKPNVITYTSL 592
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
I+ + E + +K + ++ + T++ + AG+PE A F +
Sbjct: 593 INGFCKKADMIRAEKVFRGMK-SFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNG 651
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC-------------NIL 191
+ + + L+N L ++ + ++ ++ + FT N +
Sbjct: 652 CPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSV 711
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LCK V+ A +L +M + G + + V T +L G +G + + + L++
Sbjct: 712 IVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIE 771
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+ A Y++ +D Y+ GRL++A ++ +
Sbjct: 772 LQTAVKYSLTLDKYLYQGRLSEASVILQTL 801
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 200/386 (51%), Gaps = 18/386 (4%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL---VHLMFKN- 174
T+I+ + R A + FLR++K V + TL+ L ++ +H N
Sbjct: 144 TLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203
Query: 175 -SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN----------LVTH 223
SR++ PNV T NI++ LCK + A ++ +EM + GM+PN +VT
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTF 263
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
++ G + AK++ G +++ G VPD TY L++G+ +G L A ++ M
Sbjct: 264 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 323
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G EP+ ++Y V+I + K K EA L ++ML P+ ++ + GKV+D
Sbjct: 324 KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 383
Query: 344 ACELWKRLLRKNCMPDNAISSTI-IHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLI 401
A +L+ +++ + + +N+ + I + LCK ++EA KLF E + + + N LI
Sbjct: 384 AKKLFS-VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 442
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+C++ +L A L++ + +G EPNV TY ++I GFC+ G + ++++M GC
Sbjct: 443 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCT 502
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVV 487
P+ +++ L+ G YES EV +++
Sbjct: 503 PDIITYNTLMRGFYESNKLEEVVQLL 528
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 174/363 (47%), Gaps = 34/363 (9%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ S N LL+ L + K Y V ++ R + + T NIL+ LC + +
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLS-GLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
+ G PN+VT+ T++ G I A R+F + G PD TY L+ G
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 268 LGRLTDAVKVMDEMEDN------GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
G + A+K+ EM ++ +PN +TY ++++ CK + EA+ L ++M +
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P+ +L + PD + +I LCKEGK+ EAKK
Sbjct: 247 IPN-------------------------EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 281
Query: 382 LFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L E G +P L+TYN+LI G C +L A L+ M KG EP+V +YN+LI G+
Sbjct: 282 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 341
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K +E +++ EML G PN ++ L++G++ +G + K+ S+ A G E +S
Sbjct: 342 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE-NS 400
Query: 501 WNF 503
+ +
Sbjct: 401 YTY 403
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 210/429 (48%), Gaps = 25/429 (5%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRN 123
+AG +S N TY+++I L L +++ + C ++ + T+I+
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQK---LGCTPDVVTYGTLIK- 182
Query: 124 YGLAGRPELAVKTFLRIE--------KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
GL G + + L E + N + +V + N +++ L + R D +F+
Sbjct: 183 -GLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEM 241
Query: 176 RHKFKV---------VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ + + P++ T N+LI LCK+ V A ++L M G+VP+LVT+ ++
Sbjct: 242 KTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 301
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G+ GD+ +A+ +F + +G PD +Y VL++GY K ++ +A+K+ +EM G
Sbjct: 302 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 361
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN +TY +++ K +A+ L M +S +D LC+ + +A +
Sbjct: 362 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 421
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
L+ L N + + +I LCK GK+ A +LF++ G P+++TY +I G C
Sbjct: 422 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 481
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
++ +A L M G P++ TYN L++GF + +E +++L M K P+
Sbjct: 482 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 541
Query: 466 SFSLLIEGL 474
+ S++++ L
Sbjct: 542 TCSIVVDML 550
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 183/396 (46%), Gaps = 53/396 (13%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+LN LLN L R F + PN+ T N LIK LC + + A R+
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRR-GYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR------GWVPDATTYTVLMDG 264
M +G P++VT+ T++ G G+I A ++ ++L+ P+ TY +++DG
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 265 YIKLGRLTDAVKVMDEME----------DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
K+GR +A ++ +EM+ D G++P+ VT+ V+I+ CK K EA+ LL
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M++ VP +I+ C G + A EL+ + K C PD + +I+ K
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY- 432
K+ EA KL++E G P+++TY++L+ G+ + ++ +A +L+ M G+ N +TY
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404
Query: 433 ----------------------------------NMLIQGFCKIGNAKEGIRILEEMLDK 458
N LI G CK G + + E++ ++
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G PN +++++I G G + ++ A+G
Sbjct: 465 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 35/239 (14%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V + N+LI K VE A+++ +EM +G PN++T+ ++L G G +++AK++
Sbjct: 328 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 387
Query: 243 FGDILDRGWVPDATTYTV-----------------------------------LMDGYIK 267
F + G ++ TY + L+DG K
Sbjct: 388 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 447
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G+L A ++ +++ + G EPN VTY +MI FC+ + +A L+ M P
Sbjct: 448 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 507
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
++ E K+E+ +L R+ +K+ PD S ++ L K+ K E L F
Sbjct: 508 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 566
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 6/274 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I ++ L + P C ++ + +I Y + E A+K +
Sbjct: 297 TYNSLIEGFCMVGDLNSARELFVSM---PSKGCEPDVISYNVLINGYSKTLKVEEAMKLY 353
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + +V + ++LL + + D +F + + N +T I + LCK
Sbjct: 354 NEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK-AHGIAENSYTYGIFLDGLCK 412
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D + A+++ E+ S + ++ G G +E A +F + + G P+ T
Sbjct: 413 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 472
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT+++ G+ + G++ A ++ +ME NG P+ +TY ++ F + K E LL M
Sbjct: 473 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 532
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Q+ P + C V+D+L ++ K ++ L R
Sbjct: 533 QKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 566
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 240/515 (46%), Gaps = 58/515 (11%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI 118
LA ++F AG T S+ LA + + A S+L L++ P +LF
Sbjct: 158 LAHELFPAAGA---------PTLLSVARSLANSPSPSAA-SVLGFLRRLPT-DASPHLFP 206
Query: 119 TVIRNYGLAGRPELAVKTFLRI--------EKFN--------------------VQRSVR 150
+I + RP LA++ FLR FN ++R R
Sbjct: 207 HLIAALSRSPRPLLALRLFLRPPTSAAITHHSFNSALLRFPLPPHLLPAFFSHSLRRFTR 266
Query: 151 SLNTLLN----------ALVQNKRYDLVHLMFK---NSRHKFKVVPNVFTCNILIKALCK 197
TLL+ +LV + L + S +K+VP+ FT + ++ AL
Sbjct: 267 LAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V+ A+ ++ EM G+V +LG + GD+ A ++F + +G P A T
Sbjct: 327 AGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y VL+ G + GR A+ VM ME V P +TYG +++ + + +A ++++M
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMR 445
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ VP+ + VI C+ G+V+ A +W ++ P+ + S +I L + GK+
Sbjct: 446 SKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMT 505
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA+ LF E E +P+++TY++++ G + + ++A W+DM+ G PN TY++LI
Sbjct: 506 EAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLI 565
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G C +G +K+ + + + ML +GC P+ +++ +I+G SG ++ A G
Sbjct: 566 NGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDT 625
Query: 497 ESD--SWNFLLTRIV--SDLDSGAGALDELLVKNC 527
D +N LL ++ DL L+++L + C
Sbjct: 626 HPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQAC 660
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 201/412 (48%), Gaps = 15/412 (3%)
Query: 54 QQNLDLALQIFHY---AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
Q L+LAL++ H A K P+ TY +++ LA A D +L+ E+ + +
Sbjct: 291 QLYLELALRVVHRSIPAWKLVPD----KFTYSTVVSALADAGRVDDAVALVHEMVVDGVV 346
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
F V+ G A K F ++ S + N LL+ L+ R
Sbjct: 347 --AAEAFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMG 404
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ + + +VVP V T ++ L + +E A +V++EM S G+VPN + ++ G+
Sbjct: 405 VMRR-MERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGF 463
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G+++ A RV+ ++ G P+ Y+ ++DG + G++T+A + EM + PN
Sbjct: 464 CKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNI 523
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY M+ + + S +A + +DML+ P++ +I+ LC G+ +DA +WK
Sbjct: 524 MTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKH 583
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSI-PSLLTYNTLIAGMCESA 408
+L + C+PD +++I C G + +LF D RG P ++ YN L+ G+ +
Sbjct: 584 MLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAK 643
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+L A L + M+++ +P+ T N ++ +I ++G LE ++ + C
Sbjct: 644 DLPRAMDLLNQMLDQACDPDTVTCNTFLR---EIEVGQKGQEFLEGLVVRLC 692
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 179/368 (48%), Gaps = 5/368 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ TV+ AGR + AV + V + + N +L A+++ +F +
Sbjct: 317 YSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAAKLFSFMQ 375
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K P+ T N+L+ L + A+ V+ M +VP ++T+ ++ G V G +
Sbjct: 376 LK-GCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRL 434
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E+A +V ++ +G VP+ ++ ++ G+ KLG + A +V D M G++PN V Y M
Sbjct: 435 EDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAM 494
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ + K EA L +M++ K VP+ ++ + G A W+ +LR C
Sbjct: 495 IDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGC 554
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ S +I+ LC G+ +A ++ RG +P + Y ++I G C S + R
Sbjct: 555 TPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLR 614
Query: 416 LWDDMVEKG-VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ DM+ +G P+V YN+L+ G + + + +L +MLD+ C P+ + + + +
Sbjct: 615 LFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREI 674
Query: 475 YESGNEGE 482
E G +G+
Sbjct: 675 -EVGQKGQ 681
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 147/328 (44%), Gaps = 21/328 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ L R + ++ E++ + E +F VI + G + A + +
Sbjct: 420 TYGAVVDGLVRCGRLEDACKVIEEMRSKGLVP-NEFVFSPVITGFCKLGEVDRASRVWDT 478
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ ++ +V + +++ L + + L+F+ K VPN+ T + +++ +
Sbjct: 479 MVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEA-KCVPNIMTYSSMVRGYFQIG 537
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D A+ ++M +G PN VT++ ++ G G ++A V+ +L RG VPD YT
Sbjct: 538 DSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYT 597
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNG-VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++ G+ G + +++ +M G P+ + Y V+++ + K A +LL+ ML
Sbjct: 598 SMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLD 657
Query: 319 RKYVPSSALCCK-----------------VIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ P + C ++ LC + + A E+ +L K +P+ A
Sbjct: 658 QACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAA 717
Query: 362 ISSTIIHWLCKEGKIWEA-KKLFDEFER 388
+ ++ +C+ ++W K +DE R
Sbjct: 718 VLEMVVRGVCRRKRVWRVIDKCWDEIWR 745
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 222/464 (47%), Gaps = 62/464 (13%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
+ P+ + L P ++ ++ + QN L+L+ F++ +PN SH T+ ++H L + R
Sbjct: 59 LTPFSKTLTPFKIQHILLKLQNDAVLSLKFFNWVQTHNPN-SHTLHTHSFLLHILTKNRN 117
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL-----------------AVKT 136
F +S+ +++ I NLF +++ +Y L L A T
Sbjct: 118 FKTAQSIFSKI-----ITTNSNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDT 172
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F++++++ +V S N L++++ KR +LV ++ R ++ PNV+T N+++ A C
Sbjct: 173 FVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRN-RISPNVYTINMVVSAYC 231
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDA 255
K ++ A VL++M MG+ PN+VT +++ GY +G + A +V ++ + G P+
Sbjct: 232 KLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNV 291
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+ L++G+ K G+L +A +V EM+ V PN VTY +I F + S L ++
Sbjct: 292 VTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEE 351
Query: 316 MLQRKYVPSSALCCKVIDL-LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M +R V + L + L LC+EGK + A + K L + N +P+ +
Sbjct: 352 M-ERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNAS------------- 397
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
T++ LIAG C A ++ MV G PN T+ M
Sbjct: 398 ---------------------TFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRM 436
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
L FCK + +++L +ML++ P+ + S + GL G
Sbjct: 437 LASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCG 480
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 7/305 (2%)
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T+ + + NA F + + G+ P + + + L R V +M N
Sbjct: 155 TLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRN 214
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+ PN T +++ A+CK + +A +L+ M P+ +I C++G + A
Sbjct: 215 RISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLA 274
Query: 345 CELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIA 402
++ ++ KN + N ++ +T+I+ CKEGK+ EA ++F E + ++ P+++TYNTLI
Sbjct: 275 LKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLIN 334
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CF 461
G ++ L+++M V+ ++ TYN LI G CK G K+ +++E LDKG
Sbjct: 335 GFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKE-LDKGNLV 393
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIVS--DLDSGAGA 518
PN ++FS LI G N V SM + S +++ L + D D
Sbjct: 394 PNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQV 453
Query: 519 LDELL 523
L ++L
Sbjct: 454 LRDML 458
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PNV T N LI CK+ + A RV EM + PN+VT+ T++ G+ G+ E
Sbjct: 287 VFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGI 346
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++ D TY L+ G K G+ A ++ E++ + PN T+ +I
Sbjct: 347 GLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQ 406
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C S A + M++ + P+ + C+ + A ++ + +L + PD+
Sbjct: 407 CVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDS 466
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I S + LC+ G+ A L E E
Sbjct: 467 SILSEVYSGLCRCGRKQFALMLCSEIE 493
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 4/245 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
F ++I Y G LA+K L + K V +V + NTL+N + + + +F
Sbjct: 258 FNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEM 317
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ V PNV T N LI + + E I + +EM + +++T+ ++ G G
Sbjct: 318 KLA-NVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGK 376
Query: 236 IENAKRVFGDILDRG-WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+ A + + LD+G VP+A+T++ L+ G A V M +G PNE T+
Sbjct: 377 TKKAAYMVKE-LDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFR 435
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++ AFCK + A +L DML+R P S++ +V LC G+ + A L + K
Sbjct: 436 MLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRKQFALMLCSEIEAK 495
Query: 355 NCMPD 359
+P
Sbjct: 496 RLLPQ 500
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 185/356 (51%), Gaps = 3/356 (0%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
++LF++ I + + LA ++ E V S N L+ LV D+ +F
Sbjct: 33 DDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 92
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ + P+ FT ++++ A+ K +E +++ +EM + G VT+ TI+ G V
Sbjct: 93 SEMK-RLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVK 151
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ A ++ ++ G+ P TY L+DG +K G + DA + DEM + G EPN
Sbjct: 152 SKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAI 211
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +++ + + + L + M+++ P VID LC +G++ D +K+L
Sbjct: 212 YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 271
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELT 411
PD + +IH L K G++ EA L+++ E +G P+L TYN+LI + ++ +
Sbjct: 272 DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAA 331
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
EAG+++++++ KG +PNVFTYN LI+G+ G+ + M+ GC PN +++
Sbjct: 332 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 387
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 158/325 (48%), Gaps = 36/325 (11%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I+ LCK + A ++ + ++G+ ++ ++ G V I+ A+ +F ++ G
Sbjct: 40 IIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 99
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY +++D K R+ D +K+ +EM + G + VTY +I K K EA
Sbjct: 100 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 159
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA-------------------------- 344
NL ++ + P+ ++D L ++G +EDA
Sbjct: 160 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 219
Query: 345 ---------CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
CEL++ ++ + PD + +I LC +G++ + F + + G P L
Sbjct: 220 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 279
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+TYN LI G+ +S L EA L++DM +KG+ PN++TYN LI K G A E ++ EE
Sbjct: 280 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 339
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGN 479
+L KG PN +++ LI G SG+
Sbjct: 340 LLAKGWKPNVFTYNALIRGYSVSGS 364
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM---- 316
LM+G +K +++ + + +G+ +++ +I CK K++ A L+
Sbjct: 5 LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLG 64
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ K +AL C ++D E ++ A EL+ + R C PD I+ + K +I
Sbjct: 65 VSLKTGSYNALICGLVD----EDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 120
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ K+ +E +G + +TYNT+I+G+ +S L EA L+ ++ +G P TY L
Sbjct: 121 EDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPL 180
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASG 494
+ G K GN ++ + +EML+ GC PN +++L+ G +G+ +V ++ SM
Sbjct: 181 LDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGM 240
Query: 495 SVESDSWNFLLTRIVSD 511
+ + S+ ++ + +D
Sbjct: 241 NPDIKSYTVVIDTLCAD 257
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 230/492 (46%), Gaps = 57/492 (11%)
Query: 41 RLYPKRLVSMIFRQQNL----DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
+L P VS I R L D+A++ F +AGK ++HN + Y S+I LA D+
Sbjct: 105 KLSPS-FVSFILRSTELQTKPDVAIRFFTWAGK-QKKYTHNLECYVSLIDVLATNGVLDS 162
Query: 97 VESLLTELKQNPEIKCGENLFITV------IRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
V+S+ ++ K+ L +TV I+++G G E + + R+++ ++ S+
Sbjct: 163 VKSVFSKFKE-------MGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLF 215
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N L+N LV +K + +F+ + K+ P+V T N +IK C+ A L
Sbjct: 216 SYNFLVNGLVNSKFIESAERVFEVMENG-KIGPDVVTYNTMIKGYCEVGKTRKAFEKLKA 274
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIE------------------------------NAK 240
M + P+ +T+ T++ GD + + K
Sbjct: 275 MELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGK 334
Query: 241 RV-----FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
RV F +++ +G + YT L+D K G + +A+ + M+ G+EP+EVTYGV
Sbjct: 335 RVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGV 394
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ + CK + EA ++ + ++ +ID L + G+V++A ++ +++K
Sbjct: 395 IVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKG 454
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
C PD+ + +I L K GKI EA L E G ++ TY LI G+ EA
Sbjct: 455 CPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEAL 514
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
LWD M++KG+ P + L G C G +IL+EM G P +T+F +I L
Sbjct: 515 TLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIP-ETAFDDMINIL 573
Query: 475 YESGNEGEVGKV 486
++G E K+
Sbjct: 574 CKAGRIKEACKL 585
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 3/278 (1%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
NL + +++ G +++ K VF + G + + L+ + LG + + + V
Sbjct: 143 NLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVW 202
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
M++NG+EP+ +Y ++ K A + + M K P +I CE
Sbjct: 203 RRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEV 262
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG-SIPSLLT 396
GK A E K + +N PD T+I EG L+ E E+G IP +
Sbjct: 263 GKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHV- 321
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+ +I G+C+ + E ++++M+ KG + NV Y LI K GN E + + + M
Sbjct: 322 YSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMK 381
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+G P++ ++ +++ L +SG E + + + G
Sbjct: 382 KEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKG 419
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 189/390 (48%), Gaps = 40/390 (10%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+IR + AG ++A++ ++ + + TL+ L R +V +
Sbjct: 15 LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGR--VVEALEHFRAMAK 72
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
P+V T L+ ALCK + A +L EM + G P+ VT +T++ G G E A
Sbjct: 73 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQA 132
Query: 240 KRVFGDILDR------------------------------------GWVPDATTYTVLMD 263
RV D++ R G+ P + ++++
Sbjct: 133 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 192
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ K L A K+++ M + G PN T+ ++I CK + GEA+ LL+ M+ P
Sbjct: 193 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSP 252
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ VI+ LC++G+V+DA EL++ + R+NC P+ + +I LCK +I EA++L+
Sbjct: 253 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 312
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCK 441
E G P ++TYN+LI G+C+S ++ EA +L+ + E GV N TY+ L G+
Sbjct: 313 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 372
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+G + RI ++DKG P+ +++ LI
Sbjct: 373 LGRMADACRIFSMLVDKGFSPDLATYTSLI 402
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 3/295 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+PN FT ILI+ D++ AI++L+EM S G N V HTT++ G G + A
Sbjct: 6 MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
F + + PD TYT L+ K G+ +A ++ EM G P+ VT+ +I+ C
Sbjct: 66 HF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE-GKVEDACELWKRLLRKNCMPDN 360
K +A +L+D++QR S A +I LC + VE A ++ ++ K P
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184
Query: 361 AISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ + +I+ CK + A KL + E+G +P++ T+ LI G+C++ + EA +L +
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
MV G PNV TY+ +I G CK G + + + M + C PN + ++LI+GL
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 299
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 209/444 (47%), Gaps = 42/444 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I + A D LL E+K N + + T+++ AGR A++
Sbjct: 8 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNG-FEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + K + V + L++AL + ++D M + + P+ T + LI LC
Sbjct: 67 FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIAR-GCAPDTVTFSTLIDGLC 124
Query: 197 KKDDVEGAIRVLDEMPSMGM------------------------------------VPNL 220
K E A RVL+++ GM P +
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+ ++ G+ D+++A ++ ++++G VP+ T+T+L+ G K R+ +A +++++
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G PN VTY +I CK + +A L M +R P+ +ID LC+ +
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG-SIPSLLTYN 398
+E+A +L+ R+ C PD +++I LCK ++ EA +LF E G S + +TY+
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TL G + +A R++ +V+KG P++ TY LI +CK A E + ++EEM K
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 424
Query: 459 GCFPNKTSFSLLIEGLYESGNEGE 482
G P + S ++ GL+E GN E
Sbjct: 425 GFPPRVNTLSAVLGGLFE-GNHTE 447
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 197/403 (48%), Gaps = 15/403 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY +++H L +A FD + +L E+ C + F T+I G E A
Sbjct: 80 TYTALVHALCKAGKFDEAQGMLREMIAR---GCAPDTVTFSTLIDGLCKFGSEEQA---- 132
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQN--KRYDLVHLMFK--NSRHKFKVVPNVFTCNILIK 193
R+ + +QR + + + ++Q +Y+ V L K P V N++I
Sbjct: 133 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 192
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK D++ A ++L+ M G VPN+ T T ++ G + A+++ ++ G P
Sbjct: 193 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSP 252
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TY+ +++G K G++ DA ++ ME PN VT+ ++I+ CK K+ EAR L
Sbjct: 253 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 312
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCK 372
M + P +ID LC+ +V++A +L++ + NA++ ST+ H
Sbjct: 313 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 372
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ +A ++F ++G P L TY +LI C+++ E L ++M KG P V T
Sbjct: 373 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 432
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++ G + + + I++ + M +GC + ++L++EG+
Sbjct: 433 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 475
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 203/436 (46%), Gaps = 46/436 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N T+ +I L +A + LL ++ C N+ + TVI G+ + A
Sbjct: 218 NVFTFTILITGLCKANRVGEAQQLLEKMVTG---GCSPNVVTYSTVINGLCKQGQVDDAY 274
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F +E+ N +V + N L++ L + KR + ++ R P++ T N LI
Sbjct: 275 ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET-GCAPDIITYNSLIDG 333
Query: 195 LCKKDDVEGAIRVLDEMPSMGM-VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK V+ A ++ +P G+ N VT++T+ GY G + +A R+F ++D+G+ P
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393
Query: 254 DATTYTVLMDGYIKLGRLTD-----------------------------------AVKVM 278
D TYT L+ Y K R + A+++
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML---QRKYVPSSALCCKVIDLL 335
D M G + + Y +++E + K +A +L+ ++ RK+ PSS+ +++ L
Sbjct: 454 DSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESL 513
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C+ G+ +DA +L ++ + + + ++ L + + EA ++F+ G P +
Sbjct: 514 CQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEI 573
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T N +I+ +C +A++ +A L M + G P++ T N LI G+CK G A ++LEE
Sbjct: 574 STVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEE 633
Query: 455 MLDKGCFPNKTSFSLL 470
M + G PN T+ LL
Sbjct: 634 MTEAGLEPNDTTHDLL 649
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 41/245 (16%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
PN+ TYG++I F A LL++M
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEM------------------------------- 35
Query: 348 WKRLLRKNCMPDNAI-SSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE 406
+ N NA+ +T++ LC G++ EA + F + P ++TY L+ +C+
Sbjct: 36 -----KSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCK 90
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + EA + +M+ +G P+ T++ LI G CK G+ ++ R+LE+++ +G + +
Sbjct: 91 AGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAA 150
Query: 467 FSLLIEGLYESGNEGEVG-KVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGALDEL 522
F +I+ L N E+ KV+ + A G + +N ++ DLDS L+ +
Sbjct: 151 FETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVM 210
Query: 523 LVKNC 527
+ K C
Sbjct: 211 IEKGC 215
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 170/319 (53%), Gaps = 2/319 (0%)
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F I K ++ + S NTL+N L +++ D K + + ++ P+VFT ++LI LC
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLD-EGFRLKKTMEENRIYPDVFTYSVLIHGLC 304
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A ++ DEM G+ PN +T T ++ G I++A + +L G PD
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLV 364
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++G K+G + A K++DEM G++P+++TY +I+ +CK A + M
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ V + +I C +G+V DA + ++ PD+A + +I CK+G +
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
KL E + G P ++TYN L+ G+C+ ++ A L + M+ GV P+ TYN+L
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Query: 436 IQGFCKIGNAKEGIRILEE 454
++G CK G A++ +++ E
Sbjct: 545 LEGHCKNGKAEDLLKLRNE 563
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 202/452 (44%), Gaps = 19/452 (4%)
Query: 72 PNFSHNYDTY----------------HSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
P F H +Y SII L + D+ S+ + +C
Sbjct: 95 PTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNF 154
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F ++ Y +G A++ F + N Q LL+ ++ N + F +
Sbjct: 155 VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMI-NSNSPVTIWTFYSE 213
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
++ P V NILI CK+ + A + +E+ G+ P V+ T++ G +
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ R+ + + PD TY+VL+ G K GRL A ++ DEM+ G+ PN +T+
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ C+ ++ A N ML P + +++ LC+ G V A +L +
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +T+I CKEG + A ++ E G + + + LI+G C + +A
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
R +MVE G++P+ TY M+I G+CK GN K G ++L+EM G P ++++L+ GL
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513
Query: 475 YESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
+ G ++ G D ++N LL
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 175/351 (49%), Gaps = 2/351 (0%)
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ I ++ V+ N L+N + L+F R K + P + N LI LC
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR-KRGLRPTTVSFNTLINGLC 269
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +++ R+ M + P++ T++ ++ G G ++ A+++F ++ RG P+
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+DG + R+ A+ +M GV+P+ V Y ++ CK +AR L+D+M
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P +ID C+EG +E A E+ K + + + DN + +I C++G++
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A++ E E G P TY +I G C+ + +L +M G +P V TYN+L
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ G CK G K +LE ML+ G P+ ++++L+EG ++G ++ K+
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 174/328 (53%), Gaps = 14/328 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
+++++I+ L ++R D L +++N + ++F + +GL GR ++A + F
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEEN---RIYPDVFTYSVLIHGLCKEGRLDVAEQLF 316
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF---KVVPNVFTCNILIKA 194
+++ ++ + + L++ +++R D N+ H+ V P++ N L+
Sbjct: 317 DEMQQRGLRPNGITFTALIDGQCRSRRIDSAM----NTYHQMLTMGVKPDLVMYNTLLNG 372
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK DV A +++DEM +GM P+ +T+TT++ GY GD+E+A + + + G V D
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+T L+ G+ + GR+ DA + + EM + G++P++ TY ++I+ +CK LL
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M + P +++ LC++G++++A L + +L PD+ + ++ CK G
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIA 402
K + KL + E+G I Y +L++
Sbjct: 553 KAEDLLKLRN--EKGLIVDYAYYTSLVS 578
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 193/375 (51%), Gaps = 3/375 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F ++ N + N LL ALV+ K YD V +++ F V +V+T ILI
Sbjct: 88 ALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEF-FGVSCSVYTLTILI 146
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC V VL ++ +G P+++T T++ G G I A I+ RG+
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P T+T++++G K+G+ + A+ M +M + EP V+Y ++I++ CK + EA +L
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
M P+ +I +C G+ + A L+K +L N PD S ++ LCK
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG + EA +F + + ++ P ++TY++LI G+C+S+ E+ L ++M+ + + P+V T
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+++ + FCK G E I+ M+++G PN +++ L++G E KV +
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446
Query: 492 ASGSV-ESDSWNFLL 505
G + S+N L+
Sbjct: 447 NKGCAPDVLSYNILI 461
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 218/466 (46%), Gaps = 44/466 (9%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
N D AL F+ H N ++ ++ L R + +D+V S+ ++ + + C
Sbjct: 83 SNFDDALAYFNQM--VHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKM-EFFGVSCSV 139
Query: 115 ---NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL------------ 159
+ I + + L G L +I K + S+ + NTL+N L
Sbjct: 140 YTLTILINCLCHLHLVG---LGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196
Query: 160 ---VQNKRYD---LVHLMFKNSRHKF-----------KVV-----PNVFTCNILIKALCK 197
+ ++ Y H M N K K+V P V + +I+I +LCK
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V A+ + M S+G+ P +VT+ +++ G G + A +F ++L+ PD T
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+++L+D K G + +A+ V +M +EP+ VTY +I CK E+ LL++ML
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R P +D+ C++G V +A + ++ + P+ ++++ C ++
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMD 436
Query: 378 EAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA+K+FD +G P +L+YN LI G C+S + EA +L+D+M KG+ PN T+ LI
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G C+ G + ++M GC P+ ++S L+ G + G+ E
Sbjct: 497 SGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDE 542
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 210/420 (50%), Gaps = 10/420 (2%)
Query: 64 FHYAGK-FHPNFSHNYDTYHSIIHKLA-RARAFDAVESLLTELKQNPEIKCGENLFITVI 121
F GK F F + T++++I+ L R +A+E L + + + + T+I
Sbjct: 159 FSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTH---TMI 215
Query: 122 RNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
N GL G+ A+ ++ + + + V S + ++++L +N+ + +F + R
Sbjct: 216 VN-GLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMR-SI 273
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P V T N LI +C + A + EM M P++VT + ++ G + A
Sbjct: 274 GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEA 333
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
VFG ++ PD TY+ L+ G K ++ +++EM + P+ VT+ + ++
Sbjct: 334 LSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV 393
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FCK EA+++++ M++R P+ ++D C ++++A +++ ++ K C PD
Sbjct: 394 FCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I CK +I EAK+LFDE +G P+ +T+ TLI+G+C++ A L+
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFK 513
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M G P++ TY+ L+ GFCK G+ E + + E + PN +L+ G+ ++G
Sbjct: 514 KMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAG 573
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 174/324 (53%), Gaps = 2/324 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + + +V + N+L+ + + ++ ++FK ++ + P+V T +IL+
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML-EWNMKPDVVTFSILV 321
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
ALCK+ V A+ V +M + M P++VT+++++ G + + + ++L R
Sbjct: 322 DALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR 381
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD T+++ +D + K G +++A +++ M + G+ PN VTY +++ +C + EAR +
Sbjct: 382 PDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKV 441
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
D M+ + P +I C+ ++++A +L+ + K P++ +T+I LC+
Sbjct: 442 FDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQ 501
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G+ + AK+LF + G P L+TY+TL++G C+ L EA L++ + + ++PN
Sbjct: 502 AGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVI 561
Query: 432 YNMLIQGFCKIGNAKEGIRILEEM 455
+L+ G CK G ++ + +
Sbjct: 562 CKILLGGMCKAGKLEDAKELFSSL 585
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 109/205 (53%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T +I + CKK V A +++ M G+ PN+VT+ +++ GY ++ A++V
Sbjct: 382 PDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKV 441
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++++G PD +Y +L+ GY K R+ +A ++ DEM G+ PN +T+ +I C+
Sbjct: 442 FDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQ 501
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A+ L M P ++ C+ G +++A L++ L + P++ I
Sbjct: 502 AGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVI 561
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE 387
++ +CK GK+ +AK+LF
Sbjct: 562 CKILLGGMCKAGKLEDAKELFSSLS 586
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 217/467 (46%), Gaps = 27/467 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPEL-- 132
N ++S++H + + LL + P N+FI I P+L
Sbjct: 176 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 235
Query: 133 -AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K + + N + ++ L ++D + K K VP+ T + +
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKV 294
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LC VE A + EM +G+ P++ T+T ++ + G IE A+ +F ++ G
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 354
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P TYT L+ Y+K ++ A + M D G PN+VTYG +++ CK +A
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 312 LLDDML----------------QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ ++ + P+ ++D LC+ KV+ A EL +L
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
C P++ + +I CK GKI A+++F + + G +PS+ TY +LI M + L A
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ M++ PNV TY +I G C+IG +++ +++L M +KGC PN +++ LI+GL
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G G++ + + T S + S N++ R++ + AG LD+
Sbjct: 595 ---GKAGKIDLSLDLFTQM-SRKGCSPNYVTYRVLINHLCAAGLLDK 637
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 156/337 (46%), Gaps = 38/337 (11%)
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
RH + PNV T L+ LCK V+ A +LD M S G PN + + ++ G+ G
Sbjct: 437 RHT--LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I++A+ VF + G++P TYT L+D K GRL A+KV+ +M + PN VTY
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
MI+ C+ +S +A LL M ++ P+ +ID L + GK++ + +L+ ++ RK
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--------------------------- 388
C P+ +I+ LC G + +A+ L E ++
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 674
Query: 389 -------GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE--KGVEPNVFTYNMLIQGF 439
G++P Y LI ++ L A L +M+E V+ + Y LIQ
Sbjct: 675 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 734
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
C +E R+ EM +G P + F LI+GL E
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 159/335 (47%), Gaps = 12/335 (3%)
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
R FK+ + C +I L + + A+ L M +PN+VT+ T+L G++ +
Sbjct: 100 REDFKL--DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ KR+ ++ G P+ + + L+ Y A K+++ M G P V Y +
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217
Query: 296 MIEAFCKGKKSGEARNLLD-------DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
I + C G++ + +LLD +ML V + LC GK + A +L
Sbjct: 218 FIGSIC-GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 276
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
K ++RK +PD + S +I +LC K+ +A LF E + G P + TY LI C++
Sbjct: 277 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 336
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L+++M G P V TY LI + K + I M+D GC PN ++
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396
Query: 468 SLLIEGLYESGNEGEVGKVVS-MATASGSVESDSW 501
L++GL ++GN + +V + + S S +SD +
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 174/368 (47%), Gaps = 19/368 (5%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN-- 115
D A F++ + + N TY +++ L +A D LL + + C N
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS---GCEPNHI 480
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL----VHLM 171
++ +I + AG+ + A + FL++ K SV + +L++ + ++ R DL + M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K+S PNV T +I LC+ + E A+++L M G PN+VT+T ++ G
Sbjct: 541 LKDS-----CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G I+ + +F + +G P+ TY VL++ G L A ++ EM+
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y I+ F K + + +L++M VP + + +ID + G++E A EL K +
Sbjct: 656 GYRCAIQGFSKSFIA--SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713
Query: 352 LR--KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+ + DN + +++I LC ++ EA +L+ E RG +P L + LI G+ E
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 773
Query: 409 ELTEAGRL 416
+ EA +L
Sbjct: 774 KWDEALQL 781
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
D G+ P TY L+ G++ +V EM ++G + T G A CK +
Sbjct: 33 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92
Query: 308 EARNLLDDMLQRK-YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A DM++R+ + + LC +I L E ++A R+ +C+P+ T+
Sbjct: 93 DAL----DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148
Query: 367 IHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ K+ ++ K++ + G P+ +N+L+ C + A +L + M G
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 426 EPNVFTYNMLIQGFCKIGNAK--------EGIRILEEMLDKGCFPNKTSFS 468
P YN+ I C G K +I EML C NK + +
Sbjct: 209 PPGYVVYNIFIGSIC--GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 257
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 226/446 (50%), Gaps = 7/446 (1%)
Query: 53 RQQNLDLALQIFHY-AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
R Q++++ +++F + + + F N S + LAR R F+ +E +L L+ N +K
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLR-NENVK 131
Query: 112 CGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
V+ Y +G AV+ + +E ++ V + N LL+ +V+++R +
Sbjct: 132 LTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARK 191
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
++ + V N TC I++K +C + VE +++++ G VPN+V + TI+GGY
Sbjct: 192 VYDEMCERGGCVDNYSTC-IMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGY 250
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
GDIENAK VF ++ +G++P T+ +++G+ K G + ++++E+++ G+
Sbjct: 251 CKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCV 310
Query: 291 VTYGVMIEA-FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+I+A + G K A ++ ++ P A +I+ LC+EGK E A L
Sbjct: 311 WFLNNIIDAKYRHGFKVDPAESI-RWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLD 369
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+K + N + +I CK + A KL + ERG P ++TY LI G+ S
Sbjct: 370 EASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSG 429
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ +A + ++++GV P+ YNML+ G CK G + EMLD+ P+ ++
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYA 489
Query: 469 LLIEGLYESGNEGEVGKVVSMATASG 494
LI+G SG+ E KV +++ G
Sbjct: 490 TLIDGFIRSGDFDEARKVFTLSVEKG 515
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T NILI LCK+ E A +LDE G++ +++ ++ Y + + A ++
Sbjct: 343 PDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKL 402
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +RG PD TY +L+ G + G + DAV + ++ D GV P+ Y +++ CK
Sbjct: 403 LLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A+ L +ML R +P + + +ID G ++A +++ + K D
Sbjct: 463 TGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVH 522
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I C+ G + EA + E +P TY+T+I G + ++ A +++ DM
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDME 582
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ +PNV TY LI GFC G+ +EM + PN +++ LI
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSF 635
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 170/386 (44%), Gaps = 22/386 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
+Y +I +++ +D LL +L E C ++ I +GL +G + AV
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQL---AERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ V N L++ L + R+ L+F + ++P+ + LI +
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR-SILPDAYVYATLIDGFIR 497
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D + A +V G+ ++V H ++ G+ G ++ A + + VPD T
Sbjct: 498 SGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ ++DGY+K + A+K+ +ME N +PN VTY +I FC A +M
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQ 617
Query: 318 QRKYVPSSALCCKVIDLLCEEGK-VEDACELWKRLLRKNCMPDNAISSTIIHWLCKE--G 374
R VP+ +I +E +E A W+ ++ C+P+ + ++ K+ G
Sbjct: 618 SRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677
Query: 375 KIW---------EAKKLFDEFER----GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++ F+ F R G YN+++ +C + A L D MV
Sbjct: 678 RFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMV 737
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKE 447
+KG P+ ++ ++ GFC +GN+K+
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y A+K F +EK + +V + +L+N + L FK +
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQ 617
Query: 177 HKFKVVPNVFTCNILIKALCKKDD-VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR-- 233
+ +VPNV T LI++ K+ +E A+ + M + VPN VT +L G+V +
Sbjct: 618 SR-DLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 234 --------GDIENAKRVFGDILDR----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
G +F + R GW Y ++ G + A + D M
Sbjct: 677 GRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRM 736
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
G P+ V++ ++ FC S + RN+
Sbjct: 737 VKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 235/471 (49%), Gaps = 13/471 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +L+ F +N+D A ++ G + + Y+++I +A ++ +
Sbjct: 8 PDVILCTKLIKGFFNSRNIDKATRVM---GILEKHGKPDVFAYNAVISGFCKANRIESAK 64
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNT 154
++L +K+ +P++ N+ +I + G+ +LA+K F + K N + ++ +
Sbjct: 65 TVLDRMKRKGFSPDV-VTHNI---MIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L+ A + D + + + P+ FT N++ + LCK+ V+ A + + S
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSR-GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P+++T+ +L + +G + ++ +I RG P+ TY++L+ + G++ ++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V ++ M++ G+ P+ Y +I AFC+ K A LD M+ ++P ++
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPS 393
LC+ G + A E++ +L C P+ + +T++ L G + A + + +G P
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN+LI+ +C + EA L DM+ +PN+ +Y ++ G CK + I +L
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
M++ GC PN+T+++LLIEG+ SG+ + ++ + ++ DS+ L
Sbjct: 420 AMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSFKRL 470
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+ + PD T L+ G+ + A +VM +E +G +P+ Y +I FCK +
Sbjct: 4 KDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIES 62
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR-KNCMPDNAISSTII 367
A+ +LD M ++ + P +I C +GK++ A ++++ LL+ NC P + +I
Sbjct: 63 AKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILI 122
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
EG I EA KL DE RG P TYN + G+C+ ++ A + +G +
Sbjct: 123 EAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCK 182
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+V TYN+L++ G EG + + E+ +GC PN ++S+LI L G E +
Sbjct: 183 PDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNL 242
Query: 487 VSMATASG 494
V + G
Sbjct: 243 VKVMKEKG 250
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAEL 410
++ K+ PD + + +I I +A ++ E+ P + YN +I+G C++ +
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML-DKGCFPNKTSFSL 469
A + D M KG P+V T+N++I FC G +++ EE+L D C P ++++
Sbjct: 61 ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVESDSWNF-LLTR 507
LIE G E K++ + G +E D++ + ++TR
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRG-LEPDTFTYNVITR 158
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 193/385 (50%), Gaps = 3/385 (0%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R +NL F + P+F+H+ ++YH ++ L ++ F + L E ++ +
Sbjct: 77 RCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEI 136
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+F V R Y A P A + F R+ +F ++ V L+ LL++L K + F
Sbjct: 137 SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
++ F +VP+ T +IL++ + D GA +V DEM V +L+ + +L
Sbjct: 197 GKAK-GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCK 255
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
GD++ ++F ++ + G PDA ++ + + Y G + A KV+D M+ + PN T
Sbjct: 256 SGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYT 315
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ +I+ CK +K +A LLD+M+Q+ P + ++ C+ +V A +L R+
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC-ESAEL 410
R C+PD + ++ L + G+ A ++++ ER P++ TY +I G+ + +L
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNML 435
EA R ++ M+++G+ P T ML
Sbjct: 436 EEACRYFEMMIDEGIPPYSTTVEML 460
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A R F +++ G P L+ + A + + + G+ P+ TY +++
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + + + AR + D+ML+R V ++D LC+ G V+ ++++ + P
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLW 417
D + IH C G + A K+ D +R +P++ T+N +I +C++ ++ +A L
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D+M++KG P+ +TYN ++ C ++L M C P++ +++++++ L
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 478 G 478
G
Sbjct: 397 G 397
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKR 350
+Y +++E K+ + L + + Y SS + V +AC + R
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNR 163
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAE 409
++ P ++H LC + + A++ F + + G +PS TY+ L+ G +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A +++D+M+E+ ++ YN L+ CK G+ G ++ +EM + G P+ SF++
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 470 LIEGLYESGNEGEVGKVV 487
I ++G+ KV+
Sbjct: 284 FIHAYCDAGDVHSAYKVL 301
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y++++ L ++ D + E+ N +K F I Y AG A K R
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMG-NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK--------------------- 178
++++++ +V + N ++ L +N++ D +L+ K
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 179 -------------FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
K +P+ T N+++K L + + A + + M P + T+T
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 226 ILGGYVWR-GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++ G V + G +E A R F ++D G P +TT +L + + G++ D V V+
Sbjct: 424 MIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM-DVVDVL 476
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 226/437 (51%), Gaps = 17/437 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E
Sbjct: 23 KNSEHALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+L++ +I +YG AG + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 81 DLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N+++ VE A R ++M S ++P++VT+ T++ GY
Sbjct: 140 KMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ R P TYT L+ GY+ + R+ DA++ ++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A + K ++R
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI----PSLL-----TYNTLIAGM 404
+ + +I CK G+ +A KL D+ I S L YN LI +
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYL 379
Query: 405 CESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + + +A L +++ GV+ P N LI+G + G+ +L+ ML +
Sbjct: 380 CNNGQTAKAEALVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSE 437
Query: 464 KTSFSLLIEGLYESGNE 480
++++ L++ Y NE
Sbjct: 438 QSAYDSLVQS-YLKKNE 453
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 217/467 (46%), Gaps = 27/467 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPEL-- 132
N ++S++H + + LL + P N+FI I P+L
Sbjct: 111 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 170
Query: 133 -AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K + + N + ++ L ++D + K K VP+ T + +
Sbjct: 171 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKV 229
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LC VE A + EM +G+ P++ T+T ++ + G IE A+ +F ++ G
Sbjct: 230 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 289
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P TYT L+ Y+K ++ A + M D G PN+VTYG +++ CK +A
Sbjct: 290 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 349
Query: 312 LLDDML----------------QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ ++ + P+ ++D LC+ KV+ A EL +L
Sbjct: 350 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 409
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
C P++ + +I CK GKI A+++F + + G +PS+ TY +LI M + L A
Sbjct: 410 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 469
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ M++ PNV TY +I G C+IG +++ +++L M +KGC PN +++ LI+GL
Sbjct: 470 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 529
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G G++ + + T S + S N++ R++ + AG LD+
Sbjct: 530 ---GKAGKIDLSLDLFTQM-SRKGCSPNYVTYRVLINHLCAAGLLDK 572
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 156/337 (46%), Gaps = 38/337 (11%)
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
RH + PNV T L+ LCK V+ A +LD M S G PN + + ++ G+ G
Sbjct: 372 RHT--LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I++A+ VF + G++P TYT L+D K GRL A+KV+ +M + PN VTY
Sbjct: 430 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 489
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
MI+ C+ +S +A LL M ++ P+ +ID L + GK++ + +L+ ++ RK
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--------------------------- 388
C P+ +I+ LC G + +A+ L E ++
Sbjct: 550 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 609
Query: 389 -------GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE--KGVEPNVFTYNMLIQGF 439
G++P Y LI ++ L A L +M+E V+ + Y LIQ
Sbjct: 610 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 669
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
C +E R+ EM +G P + F LI+GL E
Sbjct: 670 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 706
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 159/335 (47%), Gaps = 12/335 (3%)
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
R FK+ + C +I L + + A+ L M +PN+VT+ T+L G++ +
Sbjct: 35 REDFKL--DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 92
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ KR+ ++ G P+ + + L+ Y A K+++ M G P V Y +
Sbjct: 93 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 152
Query: 296 MIEAFCKGKKSGEARNLLD-------DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
I + C G++ + +LLD +ML V + LC GK + A +L
Sbjct: 153 FIGSIC-GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 211
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
K ++RK +PD + S +I +LC K+ +A LF E + G P + TY LI C++
Sbjct: 212 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 271
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L+++M G P V TY LI + K + I M+D GC PN ++
Sbjct: 272 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 331
Query: 468 SLLIEGLYESGNEGEVGKVVS-MATASGSVESDSW 501
L++GL ++GN + +V + + S S +SD +
Sbjct: 332 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 366
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 178/377 (47%), Gaps = 19/377 (5%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN-- 115
D A F++ + + N TY +++ L +A D LL + + C N
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS---GCEPNHI 415
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL----VHLM 171
++ +I + AG+ + A + FL++ K SV + +L++ + ++ R DL + M
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K+S PNV T +I LC+ + E A+++L M G PN+VT+T ++ G
Sbjct: 476 LKDS-----CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G I+ + +F + +G P+ TY VL++ G L A ++ EM+
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y I+ F K + + +L++M VP + + +ID + G++E A EL K +
Sbjct: 591 GYRCAIQGFSKSFIA--SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648
Query: 352 LR--KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+ + DN + +++I LC ++ EA +L+ E RG +P L + LI G+ E
Sbjct: 649 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 708
Query: 409 ELTEAGRLWDDMVEKGV 425
+ EA +L + +GV
Sbjct: 709 KWDEALQLCYGICHEGV 725
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 16/198 (8%)
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK-YVPSSALCCKVIDLLCEEG 339
M ++G + T G A CK + +A DM++R+ + + LC +I L E
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADAL----DMIEREDFKLDTVLCTHMISGLMEAS 56
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYN 398
++A R+ +C+P+ T++ K+ ++ K++ + G P+ +N
Sbjct: 57 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 116
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK--------EGIR 450
+L+ C + A +L + M G P YN+ I C G K +
Sbjct: 117 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--GQEKLPSPDLLDLAEK 174
Query: 451 ILEEMLDKGCFPNKTSFS 468
I EML C NK + +
Sbjct: 175 IYGEMLAANCVLNKVNVA 192
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 197/375 (52%), Gaps = 3/375 (0%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
Q + + ++N L + DL + N + K+ P V N +I LCK ++ A+
Sbjct: 13 QPDLVTYGVVVNGLCKRGDTDLAFNLL-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+ EM + G+ PN+VT+++++ G +A R+ D+++R PD T++ L+D +
Sbjct: 72 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+K G+L +A K+ DEM ++P+ VTY +I FC + EA+ + + M+ + P
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 191
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+I C+ +VE+ E+++ + ++ + + + +I L + G A+++F E
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
G P+++TYNTL+ G+C++ +L +A +++ + +EP ++TYN++I+G CK G
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNF 503
++G + + KG P+ +++ +I G G++ E + G++ S +N
Sbjct: 312 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 371
Query: 504 LLTRIVSDLDSGAGA 518
L+ + D D A A
Sbjct: 372 LIRARLRDGDREASA 386
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 198/385 (51%), Gaps = 2/385 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G +LA ++E+ ++ V NT+++ L + K D +FK K + PNV T
Sbjct: 30 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVT 88
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ LI LC A R+L +M + P++ T + ++ +V G + A++++ +++
Sbjct: 89 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 148
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
R P TY+ L++G+ RL +A ++ + M P+ VTY +I+ FCK K+
Sbjct: 149 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 208
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
E + +M QR V ++ +I L + G + A E++K ++ P+ +T++
Sbjct: 209 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 268
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK GK+ +A +F+ +R + P++ TYN +I GMC++ ++ + L+ ++ KGV+
Sbjct: 269 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 328
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+V YN +I GFC+ G+ +E + +EM + G PN ++ LI G+ ++
Sbjct: 329 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 388
Query: 487 VSMATASGSVESDSWNFLLTRIVSD 511
+ + G S L+T ++ D
Sbjct: 389 IKEMRSCGFAGDASTIGLVTNMLHD 413
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 148/274 (54%), Gaps = 3/274 (1%)
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
++D M + G P+LVT+ ++ G RGD + A + + P Y ++DG
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K + DA+ + EME G+ PN VTY +I C + +A LL DM++RK P
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ID +EGK+ +A +L+ +++++ P S++I+ C ++ EAK++F EF
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF-EF 181
Query: 387 --ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+ P ++TYNTLI G C+ + E ++ +M ++G+ N TYN+LIQG + G+
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I +EM+ G PN +++ L++GL ++G
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 275
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 180/415 (43%), Gaps = 58/415 (13%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARA 93
K P L ++ + + +++D AL +F PN TY S+I L
Sbjct: 46 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV----TYSSLISCLCNYGR 101
Query: 94 FDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
+ LL+++ K NP++ F +I + G+ A K + + K ++ S+
Sbjct: 102 WSDASRLLSDMIERKINPDV----FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 157
Query: 151 SLNTLLNALVQNKRYDLVHLMFKN--SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ ++L+N + R D MF+ S+H F P+V T N LIK CK VE + V
Sbjct: 158 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCF---PDVVTYNTLIKGFCKYKRVEEGMEVF 214
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
EM G+V N VT+ ++ G GD + A+ +F +++ G P+ TY L+DG K
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G+L A+ V + ++ + +EP TY +MIE CK
Sbjct: 275 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA------------------------- 309
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
GKVED +L+ L K PD +T+I C++G EA LF E E
Sbjct: 310 ----------GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY----NMLIQG 438
G++P+ YNTLI + + L +M G + T NML G
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 414
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 10/269 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDA 96
P + L++ LD A Q+F + H P+ TY+++I + + +
Sbjct: 154 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV----TYNTLIKGFCKYKRVEE 209
Query: 97 VESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ E+ Q + G + + +I+ AG ++A + F + V ++ + NTL
Sbjct: 210 GMEVFREMSQRGLV--GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L+ L +N + + ++F+ + K+ P ++T NI+I+ +CK VE + + G
Sbjct: 268 LDGLCKNGKLEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 326
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++V + T++ G+ +G E A +F ++ + G +P++ Y L+ ++ G +
Sbjct: 327 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 386
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ EM G + T G++ G+
Sbjct: 387 ELIKEMRSCGFAGDASTIGLVTNMLHDGR 415
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+G P L+TY ++ G+C+ + A L + M + +EP V YN +I G CK + +
Sbjct: 10 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 69
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+ + +EM KG PN ++S LI L G + +++S
Sbjct: 70 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 110
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 198/387 (51%), Gaps = 5/387 (1%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + SV NT++ ++V+ K + + K K V P++FT +I I
Sbjct: 68 AVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFK-GVTPSIFTLSIWI 126
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C ++ A VL + G PN +T TT++ G G+++ A ++ +G +
Sbjct: 127 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 186
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
D Y L++G K+GR DA +++ EME V+PN V Y ++I++FCK + + +AR+L
Sbjct: 187 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 246
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
++ P +I C G+ + +L ++ KN P+ + +I C+
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306
Query: 373 EGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+GK+ EA+ +F+ +RG P ++T+NTLI+G C + EA +L+D + E+G+ P+V++
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y +LI G+CK E + + EM K + +S LI+GL +SG ++ S
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426
Query: 492 ASGSVES-DSWNFLLTRI--VSDLDSG 515
G + ++N L+ + D+D G
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMG 453
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 172/327 (52%), Gaps = 2/327 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN+ N++I + CK + A + ++ MG+ P+++T+T+++ G+ G K
Sbjct: 220 VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVK 279
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ +++++ P+ T+ VL+D + + G++ +A + + M G +P+ VT+ +I
Sbjct: 280 QLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGH 339
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C EAR L D + +R +P +I C+ ++++A L+ + KN + D
Sbjct: 340 CLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDI 399
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ S++I LCK G+I A +LF G P+++TYN LI C+ ++ L+
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M KG+ P V TYN+LI G+CK +E + +L M K P+ +++ L +GL +SG
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLL 505
+ ++ + G V+ ++N LL
Sbjct: 520 ISDAWELFKVMHVGGPPVDVATYNVLL 546
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 183/366 (50%), Gaps = 11/366 (3%)
Query: 81 YHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT--- 136
Y ++I+ L + R+ DA + LL E+ + +K ++ +I ++ + EL K
Sbjct: 192 YGTLINGLCKIGRSIDAFQ-LLQEM-EGQVVKPNIVIYNMIIDSFC---KDELTCKARDL 246
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+L+I + + + +L+ + ++ V + +K + PNV+T N+LI A C
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK-NINPNVYTFNVLIDAFC 305
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+K + A + + M G P++VT T++ G+ G++ A+++F + +RG +PD
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+YT+L+ GY K R+ +AV + +EM + + V Y +I+ CK + A L +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P+ +ID C+ ++ EL+K + K P + +I+ CK +I
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485
Query: 377 WEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA L + ++ P +TYN+L G+C+S +++A L+ M G +V TYN+L
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 545
Query: 436 IQGFCK 441
+ FCK
Sbjct: 546 LDAFCK 551
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 1/296 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T LI+ C+ +++ EM + + PN+ T ++ + +G + A+ +
Sbjct: 257 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 316
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ RG PD T+ L+ G+ G + +A K+ D + + G+ P+ +Y ++I +CK
Sbjct: 317 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 376
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EA +L ++M + V L +ID LC+ G++ A EL+ + P+
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 436
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I CK I +LF +G P++LTYN LI G C+S + EA L M
Sbjct: 437 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 496
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
K + P+ TYN L G CK G + + + M G + ++++L++ ++
Sbjct: 497 SKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 133/261 (50%), Gaps = 1/261 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I++A +F +++ +P + ++ +K+ A+ ++ +M GV P+ T +
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I +C + G A ++L +L+R Y P++ V+ LC G+V+ A + + +
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAG 414
+ D T+I+ LCK G+ +A +L E E + P+++ YN +I C+ +A
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ +V+ G++P++ TY LI+GFC+ G E +++ EM++K PN +F++LI+
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304
Query: 475 YESGNEGEVGKVVSMATASGS 495
G E + ++ G
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQ 325
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 16/300 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+I R + V+ L+ E+ N I F +I + G+ A F
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEM-VNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319
Query: 140 IEKFNVQRSVRSLNTLL-------NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ K Q + + NTL+ N L K +D V + ++P+V++ ILI
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVF--------ERGILPDVWSYTILI 371
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK ++ A+ + +EM MV ++V +++++ G G I A +F I + G
Sbjct: 372 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 431
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +L+D + K+ + +++ M G+ P +TY ++I +CK K+ EA NL
Sbjct: 432 PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNL 491
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M + P S + D LC+ G++ DA EL+K + D A + ++ CK
Sbjct: 492 LSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +I Y R + AV F + N+ + ++L++ L ++ R +F
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ PNV T NILI A CK D++ I + M G+ P ++T+ ++ GY I
Sbjct: 427 ND-GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A + + + PD+ TY L DG K GR++DA ++ M G + TY V+
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 545
Query: 297 IEAFCKGK 304
++AFCK +
Sbjct: 546 LDAFCKAQ 553
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 221/466 (47%), Gaps = 33/466 (7%)
Query: 38 WPQRLYPKR---LVSMIFRQQNLDLALQ------IFHYA--GKFHPNFSHNYDTYHSIIH 86
W L PK L S Q L L IFH+ + P+++H+ + S+IH
Sbjct: 27 WNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWAQSIPHYTHSLHSSWSMIH 86
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVIR-----------------NYGLAGR 129
L + R F + +L ++ Q EI ++ +++R +Y +
Sbjct: 87 MLTKHRHFKTAQQVLDKMAQR-EILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSKM 145
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
AV+ F ++ N++ + + L+N+L+++ +V ++K VVPN++ N
Sbjct: 146 THDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQD-GVVPNIYVYN 204
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI A K DVE A +L+EM G+VP++ T+ T++ Y +G A V +
Sbjct: 205 CLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMERE 264
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G D +Y L+ G+ K G++ +A+++ E++D PN VTY +I+ +CK + EA
Sbjct: 265 GINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKD--AIPNHVTYTTLIDGYCKANEFEEA 322
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L + M+ + P ++ LC +G++ DA +L + + D+ +T+I+
Sbjct: 323 LRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINA 382
Query: 370 LCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
CK G + A K + E G P+ TY LI G C+++EL A L M++ G PN
Sbjct: 383 YCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPN 442
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
TY+ ++ +CK N + + +E L KG N + + LI L
Sbjct: 443 YRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRL 488
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 162/360 (45%), Gaps = 11/360 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N Y+ +IH +++R + E +L E++ P+I + T+I Y G A
Sbjct: 199 NIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDI----FTYNTLIALYCKKGLHYEA 254
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ ++E+ + + S N+L+ + + MF + +PN T LI
Sbjct: 255 LSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK---DAIPNHVTYTTLID 311
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK ++ E A+R+ + M + G+ P +VT+ +IL G I +A ++ ++ +R
Sbjct: 312 GYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQA 371
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D+ T L++ Y K+G L A+K +M + G+ PN TY +I FCK + A+ LL
Sbjct: 372 DSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELL 431
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
ML + P+ ++D C++ + L L K + ++ +I LCK
Sbjct: 432 FGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKI 491
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+I A+KL E +G + Y +L +S A + ++M + + V Y
Sbjct: 492 ERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIY 551
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 52/360 (14%)
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ + ++H++ K+ RH FK V + L + +R+ D+ P +
Sbjct: 79 HSSWSMIHMLTKH-RH-FKTAQQVLDKMAQREILSSPSVLTSLVRIHDD-------PEVN 129
Query: 222 TH--TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+H + I+ Y +A +VF + P TVLM+ +K G + KV
Sbjct: 130 SHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYK 189
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
M +GV PN Y +I A K + A +L++M
Sbjct: 190 RMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEM----------------------- 226
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
E+ K +PD +T+I CK+G +EA + D+ ER I +++YN
Sbjct: 227 ------EV------KGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYN 274
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
+LI G C+ ++ EA R++ ++ K PN TY LI G+CK +E +R+ E M+ K
Sbjct: 275 SLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAK 332
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFLLTRI--VSDLDSG 515
G +P +++ ++ L G + K++ M+ +S + N L+ + DL+S
Sbjct: 333 GLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSA 392
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 213/434 (49%), Gaps = 10/434 (2%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P +L ++ ++ ++ +F AG + H++ Y+ +I KL F ++ LL +
Sbjct: 61 PSQLCKLLELPLDVPTSMDLFEKAG-LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQ 119
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQN 162
+K + E+LFI ++R YG AG P A + L + + + + +S N +L LV
Sbjct: 120 MKDEGCV-FKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAG 178
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ +F + + + P V+T +++KA C ++V+ A +L +M G VPN +
Sbjct: 179 NCPKVAPNVFYDMLSR-GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSII 237
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ + A ++ ++ G PD T+ ++ G K GR+ +A K+ D M
Sbjct: 238 YQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML 297
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+ + G ++ C+ K EAR ML + P++ L +I+ G+ E
Sbjct: 298 LRDFTADALIQGYLMHGLCRMGKVDEAR----AMLSKIPNPNTVLYNTLINGYVVSGRFE 353
Query: 343 DACE-LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
+A + L+K ++ PD + +I LCK+G + A + DE ++G P+++TY L
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G C+ EA ++ + M KG+ N YN LI CK G ++ +++ EM KGC
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473
Query: 461 FPNKTSFSLLIEGL 474
P+ +F+ LI GL
Sbjct: 474 KPDIYTFNSLIYGL 487
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 180/362 (49%), Gaps = 4/362 (1%)
Query: 153 NTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
NTL+N V + R++ L++KN P+ FT NI+I LCKK + A+ LDEM
Sbjct: 340 NTLINGYVVSGRFEEAKDLLYKNMVIA-GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G PN++T+T ++ G+ +G E A +V + +G + Y L+ K G++
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
DA+++ EM G +P+ T+ +I CK K EA L DML + ++ +
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGS 390
I ++ A +L + + C DN + +I LCK G + L ++ F
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
PS+ + N LI C + ++ +A + DM+++G+ P++ TYN LI G CK+G +E +
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIV 509
+ + KG P+ +++ LI G + +++ ++G + ++ +W+ L+ V
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFV 698
Query: 510 SD 511
+
Sbjct: 699 KN 700
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 219/459 (47%), Gaps = 27/459 (5%)
Query: 65 HYAGKFHP-----NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
H A K H +F+ + ++H L R D ++L+++ NP L+ T
Sbjct: 287 HEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP-NPNTV----LYNT 341
Query: 120 VIRNYGLAGRPELAVKTFLR---IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+I Y ++GR E A + I F + + N +++ L + K Y + L F +
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGF--EPDAFTFNIMIDGLCK-KGYLVSALEFLDEM 398
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K PNV T ILI CK+ E A +V++ M + G+ N V + ++G G I
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A +++G++ +G PD T+ L+ G K ++ +A+ + +M GV N VTY +
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I AF + + +A L+ +M R + +I LC+ G E L +++ +
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P + +I+ C+ GK+ +A + D +RG P ++TYN+LI G+C+ EA
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L++ + KG+ P+ TYN LI +C G + ++L + + G PN+ ++S+LI
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFV 698
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDS 514
++ ++ E ++ +W F L I+ + S
Sbjct: 699 KNNSDSE----------QFTILMGNWGFWLAAIIRHVSS 727
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 145/275 (52%), Gaps = 5/275 (1%)
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A VF D+L RG P T+ V+M + + + A ++ +M +G PN + Y ++I
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A + + EA LL++M P VI LC+ G++ +A +L R+L ++
Sbjct: 244 ALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTA 303
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR-LW 417
D I ++H LC+ GK+ EA+ + + P+ + YNTLI G S EA L+
Sbjct: 304 DALIQGYLMHGLCRMGKVDEARAMLSKIPN---PNTVLYNTLINGYVVSGRFEEAKDLLY 360
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+MV G EP+ FT+N++I G CK G + L+EM+ KG PN ++++LI+G +
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQ 420
Query: 478 GNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
G+ E KVV+ +A G S+ + +N L+ + D
Sbjct: 421 GHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 239/565 (42%), Gaps = 68/565 (12%)
Query: 18 SIGGARCSLSTITVTPPIKPWPQ----------RLYPKR-----LVSMIFRQQNLDLALQ 62
S+ A LS + +P P RL+P LV + L AL
Sbjct: 172 SLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALS 231
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
F S + TY++++ R +LL +K+ I + T++
Sbjct: 232 TLSTMQGF--GLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKE-GIAPTRATYNTLVS 288
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
Y G + A + F + + + N L L Q + D + H V
Sbjct: 289 AYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVS 348
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N L+ A K A+ +L+EM G+ +LVTH ++ G G +E A
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE--------------- 287
+ + G PD TY L+D Y K + A +MDEM +G++
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468
Query: 288 --------------------PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
P+EV+YG ++ A+ K K A L D+M +RK PS
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-F 386
+I LC GK+ +A + L++K +PD+ + IIH CKEG + +A + ++
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E P ++T NTL+ G+C +L +A +L++ EKG + +V TYN LIQ CK G+
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
+ +M +G P+ ++++++ L E+G E ++ SG + S+ +++ L
Sbjct: 649 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKL-SERFSYPLI 707
Query: 507 R-------------IVSDLDSGAGA 518
+ + SD +SG A
Sbjct: 708 KSSAEEVKTGKDPEVKSDCESGGNA 732
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 191/426 (44%), Gaps = 78/426 (18%)
Query: 130 PELAVK---TFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNV 185
P LA + +F R + +V+ S+++ N +L+AL ++ L S ++ PN
Sbjct: 153 PHLAAQLLHSFRR--RGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNH 210
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+T N+L+ C K + A+ L M G+ P++VT+ T+L + +G + A+ +
Sbjct: 211 YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLAR 270
Query: 246 ILDRGWVPDATTYTVLMDGYIKL-----------------------------------GR 270
+ G P TY L+ Y +L G+
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330
Query: 271 LTDAVKVMDEMED-NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ +A K+ DEME + V P+ VTY +++A K ++S +A NLL++M + S
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--- 386
V+ LC EG++E+A K + + PD +T+I CK + +A L DE
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450
Query: 387 ---------------------------------ERGSIPSLLTYNTLIAGMCESAELTEA 413
+RG +P ++Y T++A + + A
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
LWD+M ++ + P+++TYN LI+G C IG E I L E++ KG P+ T+++++I
Sbjct: 511 LYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHA 570
Query: 474 LYESGN 479
+ G+
Sbjct: 571 YCKEGD 576
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 204/434 (47%), Gaps = 43/434 (9%)
Query: 80 TYHSIIHK-LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY++++ R+ DA+ +LL E++ + +K V++ G+ E A+
Sbjct: 353 TYNTLVDACFKYQRSSDAL-NLLEEMR-DKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + + V + NTL++A + + LM + R K+ + FT N L+ LCK
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKM--DTFTLNTLLYNLCK 468
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E A +L P G VP+ V++ T++ Y E A ++ ++ R P T
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L+ G +G+LT+A+ ++E+ G+ P++ TY ++I A+CK +A + ML
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + P C +++ LC GK+E A +L++ K D +T+I LCK+G +
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648
Query: 378 EAKKLFDEFE-RGSIPSLLTYNTLIAGMCESA----------ELTEAGRLWD-------- 418
A F + E RG P TYN +++ + E+ +L E+G+L +
Sbjct: 649 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIK 708
Query: 419 ---DMVEKGVEPNVF---------------TYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ V+ G +P V +YN ++ C G KE +L+EM+ KG
Sbjct: 709 SSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGM 768
Query: 461 FPNKTSFSLLIEGL 474
+ +++ L+EGL
Sbjct: 769 SVDSSTYITLMEGL 782
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 4/267 (1%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K K+ P+++T N LIK LC + AI L+E+ G+VP+ T+ I+ Y GD+E
Sbjct: 519 KRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLE 578
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + +L+ + PD T LM+G G+L A+K+ + + G + + +TY +I
Sbjct: 579 KAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLI 638
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+A CK A + DM R P + V+ L E G+ E+A + +L +
Sbjct: 639 QALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKL 698
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP---SLLTYNTLIAGMCESAELTEAG 414
+ S +I +E K + ++ + E G +YN + +C +L EA
Sbjct: 699 SER-FSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAK 757
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ D+M++KG+ + TY L++G K
Sbjct: 758 AVLDEMMQKGMSVDSSTYITLMEGLIK 784
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 4/182 (2%)
Query: 309 ARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKV--EDACELWKRLLRKNCMPDNAISST 365
A LL +R +V PS V+ L + + ++++ L+ P++ +
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215
Query: 366 IIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++H C +G + +A + G P ++TYNTL+ C L EA L M ++G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ P TYN L+ + ++G K+ ++E M G P+ ++++L GL ++G E
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335
Query: 485 KV 486
K+
Sbjct: 336 KL 337
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 40/263 (15%)
Query: 80 TYHSIIHKLAR-ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY+++I L + +A++ L +K+ + + + +I Y G E A +
Sbjct: 528 TYNTLIKGLCTIGKLTEAIDKLNELMKKG--LVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++ + + V + NTL+N L + + + +F++ K K V +V T N LI+ALCK
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKV-DVITYNTLIQALCKD 644
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
DV+ A+ +M + G+ P+ T+ +L G E A+ + + + G + + +Y
Sbjct: 645 GDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY 704
Query: 259 TVL-----------------------------MDGYIKL-------GRLTDAVKVMDEME 282
++ + Y K G+L +A V+DEM
Sbjct: 705 PLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMM 764
Query: 283 DNGVEPNEVTYGVMIEAFCKGKK 305
G+ + TY ++E K +K
Sbjct: 765 QKGMSVDSSTYITLMEGLIKRQK 787
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 379 AKKLFDEFER-GSI-PSLLTYNTLIAGMCESAELTEAGRL--WDDMVEKGVEPNVFTYNM 434
A +L F R G + PSL N +++ + S + L + ++ + PN +T+N+
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ C G + + L M G P+ +++ L++ G GE +++ G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 219/478 (45%), Gaps = 55/478 (11%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
+Q+ LAL+ F +A K F ++Y ++H L AR + L EL + I G
Sbjct: 106 KQDPKLALKFFRWA-KTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPG 164
Query: 114 ENLFITV-------IRNYGL----------AGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
++F + + +G+ G E A + F R+ +F V RS N L
Sbjct: 165 FDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFL 224
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
L + + DL + F++ + +VFT NI+I +CK+ D+ A + +M MG+
Sbjct: 225 YRLAKTGKGDLSNKFFRDMVGA-GIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGL 283
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++VT+ +++ GY G ++ + +F ++ D G PD TY L++ + K ++ A
Sbjct: 284 TPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFH 343
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ EM+++G++PN VTY +I+A CK +A L DM + P+ +ID C
Sbjct: 344 FLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANC 403
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI----- 391
+ G + DA +L +L+ + +T++ LCKEG++ EA+ LF + +
Sbjct: 404 KAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLK 463
Query: 392 -------------------------------PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
P LL Y T+I G+C +L E + +M
Sbjct: 464 TYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEM 523
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G+ N Y + + + K G E + +L+EM D G +F +LI+GL + G
Sbjct: 524 KACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKG 581
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 212/482 (43%), Gaps = 88/482 (18%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I + + +SL ++KQ P+I +L I YG G + +
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSL----IDGYGKLGLLDESFCL 309
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
F ++ + V + N L+N + K + +H M KNS K PNV T + LI
Sbjct: 310 FEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEM-KNSGLK----PNVVTYSTLI 364
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPN--------------------------------- 219
ALCK+ ++ AI+ L +M +G+ PN
Sbjct: 365 DALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVG 424
Query: 220 --LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK- 276
+VT+TT+L G G + A+ +F ++ G P+ TYT L+ G+IK R+ +A++
Sbjct: 425 FNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALEL 484
Query: 277 ----------------------------------VMDEMEDNGVEPNEVTYGVMIEAFCK 302
VM EM+ G+ N V Y + ++A+ K
Sbjct: 485 LKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFK 544
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN-A 361
K+ EA NLL +M + C +ID LC++G VE+A + + R+ N P+N A
Sbjct: 545 TGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVA 604
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + +I LCK I AKKLFDE + + +P + Y LI G + + EA + M
Sbjct: 605 VCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRM 664
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
E G+E ++ Y L+ G + ++ L EM+ KG P++ L+ YE G+
Sbjct: 665 SELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSI 724
Query: 481 GE 482
E
Sbjct: 725 DE 726
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN-LVTHTTILGGYVWRGDIENAKRV 242
+ T +LI LCKK VE AI M + PN + T ++ G IE AK++
Sbjct: 566 TIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKL 625
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ D+ VPD YT L+DG +K +A+ + M + G+E + Y ++ +
Sbjct: 626 FDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQ 685
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-------- 354
G +AR L++M+ + VP LC +++ E G +++A EL LL+K
Sbjct: 686 GNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKKVPLDELLE 745
Query: 355 --NCMPDNAISSTIIHWLCKEGKIWEAKK 381
N MP+ + C++G ++ K+
Sbjct: 746 EQNLMPEKILR-------CRDGDGYDWKE 767
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 217/467 (46%), Gaps = 27/467 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPEL-- 132
N ++S++H + + LL + P N+FI I P+L
Sbjct: 176 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 235
Query: 133 -AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K + + N + ++ L ++D + K K VP+ T + +
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKV 294
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LC VE A + EM +G+ P++ T+T ++ + G IE A+ +F ++ G
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 354
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P TYT L+ Y+K ++ A + M D G PN+VTYG +++ CK +A
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 312 LLDDML----------------QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ ++ + P+ ++D LC+ KV+ A EL +L
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
C P++ + +I CK GKI A+++F + + G +PS+ TY +LI M + L A
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ M++ PNV TY +I G C+IG +++ +++L M +KGC PN +++ LI+GL
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Query: 475 YESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G G++ + + T S + S N++ R++ + AG LD+
Sbjct: 595 ---GKAGKIDLSLDLFTQM-SRKGCSPNYVTYRVLINHLCAAGLLDK 637
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 156/337 (46%), Gaps = 38/337 (11%)
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
RH + PNV T L+ LCK V+ A +LD M S G PN + + ++ G+ G
Sbjct: 437 RHT--LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I++A+ VF + G++P TYT L+D K GRL A+KV+ +M + PN VTY
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
MI+ C+ +S +A LL M ++ P+ +ID L + GK++ + +L+ ++ RK
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--------------------------- 388
C P+ +I+ LC G + +A+ L E ++
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 674
Query: 389 -------GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE--KGVEPNVFTYNMLIQGF 439
G++P Y LI ++ L A L +M+E V+ + Y LIQ
Sbjct: 675 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 734
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
C +E R+ EM +G P + F LI+GL E
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 159/335 (47%), Gaps = 12/335 (3%)
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
R FK+ + C +I L + + A+ L M +PN+VT+ T+L G++ +
Sbjct: 100 REDFKL--DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ KR+ ++ G P+ + + L+ Y A K+++ M G P V Y +
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217
Query: 296 MIEAFCKGKKSGEARNLLD-------DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
I + C G++ + +LLD +ML V + LC GK + A +L
Sbjct: 218 FIGSIC-GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 276
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
K ++RK +PD + S +I +LC K+ +A LF E + G P + TY LI C++
Sbjct: 277 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 336
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L+++M G P V TY LI + K + I M+D GC PN ++
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396
Query: 468 SLLIEGLYESGNEGEVGKVVS-MATASGSVESDSW 501
L++GL ++GN + +V + + S S +SD +
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 178/377 (47%), Gaps = 19/377 (5%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN-- 115
D A F++ + + N TY +++ L +A D LL + + C N
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS---GCEPNHI 480
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL----VHLM 171
++ +I + AG+ + A + FL++ K SV + +L++ + ++ R DL + M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K+S PNV T +I LC+ + E A+++L M G PN+VT+T ++ G
Sbjct: 541 LKDS-----CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G I+ + +F + +G P+ TY VL++ G L A ++ EM+
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y I+ F K + + +L++M VP + + +ID + G++E A EL K +
Sbjct: 656 GYRCAIQGFSKSFIA--SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713
Query: 352 LR--KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+ + DN + +++I LC ++ EA +L+ E RG +P L + LI G+ E
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 773
Query: 409 ELTEAGRLWDDMVEKGV 425
+ EA +L + +GV
Sbjct: 774 KWDEALQLCYGICHEGV 790
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
D G+ P TY L+ G++ +V EM ++G + T G A CK +
Sbjct: 33 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92
Query: 308 EARNLLDDMLQRK-YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A DM++R+ + + LC +I L E ++A R+ +C+P+ T+
Sbjct: 93 DAL----DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148
Query: 367 IHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ K+ ++ K++ + G P+ +N+L+ C + A +L + M G
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 426 EPNVFTYNMLIQGFCKIGNAK--------EGIRILEEMLDKGCFPNKTSFS 468
P YN+ I C G K +I EML C NK + +
Sbjct: 209 PPGYVVYNIFIGSIC--GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 257
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 210/414 (50%), Gaps = 4/414 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
FSH +I ++ F + SLL L ++ K L+ +I +Y + L+
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTS-SSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLS 113
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + N LL +V + ++ F + +K KVV +V++ ILIK
Sbjct: 114 ISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF--NENKSKVVLDVYSFGILIK 171
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ ++E + +L E+ G PN+V +TT++ G +G+IE AK +F ++ G V
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TYTVL++G K G ++ ++M+++GV PN TY ++ CK ++ +A +
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M +R + +I LC E K+ +A ++ ++ P+ +T+I C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
GK+ +A L + + RG PSL+TYN L++G C + + A ++ +M E+G++P+ TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+LI F + N ++ I++ M + G P+ ++S+LI G G E ++
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 231/509 (45%), Gaps = 14/509 (2%)
Query: 11 APSCLLQSIGG-------ARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQI 63
A S LLQ I G SL RLY + +++ + Q+L+L++
Sbjct: 58 AQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLY-EVIINSYVQSQSLNLSISY 116
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRN 123
F+ F + ++ ++ + + +F+ S E K + F +I+
Sbjct: 117 FNEM--VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYS--FGILIKG 172
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
AG E + + + +F +V TL++ + + +F K +V
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF-EMGKLGLVA 231
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N T +LI L K + + ++M G+ PNL T+ ++ G ++A +VF
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ +RG + TY L+ G + +L +A KV+D+M+ +G+ PN +TY +I+ FC
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K G+A +L D+ R PS ++ C +G A ++ K + + P
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I + + +A +L E G +P + TY+ LI G C ++ EA RL+ MVE
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
K EPN YN +I G+CK G++ +++L+EM +K PN S+ +IE L + E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 483 VGKVVSMATASGSVESDSWNFLLTRIVSD 511
++V SG S S L++R +D
Sbjct: 532 AERLVEKMIDSGIDPSTSILSLISRAKND 560
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 4/344 (1%)
Query: 153 NTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +LNA+ + D V L+ K + F ++ + N ++K LC ++DEM
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAF--FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ PN+VT T++G G E V + + G PD Y ++DG K G L
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A ++++ M G++PN V Y +++ C ++ EA LL +M Q+ +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GS 390
+D C+ G V+ EL +++L CMPD +T+I+ CKEG I EA L G
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+ ++Y ++ G+C + +A L M+++G PN T+N LI CK G ++ I
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L++ML GC P+ S+S +I+GL ++G E +++++ G
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 194/387 (50%), Gaps = 9/387 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T++++I L R F+ V +L ++ ++ P+I+ ++ T+I G E+A
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR----MYATIIDGICKEGHLEVA 305
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R+ + ++ +V NT+L L +R+ + K + +V T NIL+
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVD 364
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ V+ I +L++M S G +P+++T+TT++ G+ G I+ A + + G P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ +YT+++ G GR DA ++M +M G PN VT+ +I CK +A LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
ML P VID L + GK E+A EL ++ K P+ I S+I L +E
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 374 GKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ + ++FD + +I S + YN +I+ +C+ E A + MV G PN TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKG 459
MLI+G G AKE +L E+ +G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 206/420 (49%), Gaps = 7/420 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
+Y++++ L A+ + VE L+ E+ + + C N+ F T+I G E +
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR---VDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + +R T+++ + + ++ + + N + + PNV N ++K LC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL-NRMPSYGLKPNVVCYNTVLKGLCS 333
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A +L EM + VT ++ + G ++ + +L G +PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT +++G+ K G + +AV ++ M G +PN V+Y ++++ C + +A L+ M+
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q+ P+ +I+ LC++G VE A EL K++L C PD ST+I L K GK
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA +L + +G P+ + Y+++ + + + +++D++ + + + YN +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK I M+ GC PN++++++LI+GL G E +++S + G++
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 190/413 (46%), Gaps = 12/413 (2%)
Query: 81 YHSIIHKLARARAF-DAVESLLTELKQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFL 138
YH I+ R+ F ++V L + + G NL + I G AV
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE---AVGLLR 205
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ F + + S N +L L KR+ D+ LM + + PN+ T N LI LC+
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELM--DEMVRVDCAPNIVTFNTLIGYLCR 263
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
E VL +M G P++ + TI+ G G +E A + + G P+
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++ G R +A +++ EM ++VT+ ++++ FC+ LL+ ML
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+P VI+ C+EG +++A L K + C P+ + ++ LC G+
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A++L + ++G P+ +T+NTLI +C+ + +A L M+ G P++ +Y+ +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G K G +E + +L M++KG PN +S + L EG V KV+ M
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL---SREGRVNKVIQM 553
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 2/332 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T +++ LC + + A+ VLDEM G P + IL G N+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RV + +G D ++++ + G + +AV ++ ++ G E + V+Y +++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ G+ L+D+M++ P+ +I LC G E E+ ++ C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CKEG + A ++ + G P+++ YNT++ G+C + EA L +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + T+N+L+ FC+ G I +LE+ML GC P+ +++ +I G + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVS 510
E ++ SM++ + S+ +L + S
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 8/254 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNS 175
+ TVI + G + AV + + + S +L L R+ D LM +
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ PN T N LI LCKK VE AI +L +M G P+L++++T++ G G
Sbjct: 454 QQGCP--PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E A + ++++G P+ Y+ + + GR+ +++ D ++D + + V Y
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL---- 351
+I + CK ++ A + M+ +P+ + +I L EG ++A EL L
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Query: 352 -LRKNCMPDNAISS 364
LRK+ M IS+
Sbjct: 632 ALRKHLMRHFGISN 645
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 291 VTYGVMIEAFCKGKKS--------------------------------GEARNLLDDMLQ 318
V Y M+ +C+ + +A +LD+M
Sbjct: 80 VAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF 139
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P + +++ C G ++ + + + K C D + +++ +C++G + E
Sbjct: 140 KGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE 199
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L + G +++YN ++ G+C + + L D+MV PN+ T+N LI
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
C+ G + +L +M + GC P+ ++ +I+G+ + G+
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ YN ++AG C + +L A RL + V PN +T+ +++G C G + + +L+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD- 511
EM KGC P + +++E SG +V+ A G ++++ + N +L I
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 512 -LDSGAGALDELLVKNC 527
+D G L +L C
Sbjct: 196 CVDEAVGLLRKLAFFGC 212
>gi|242088695|ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 185/388 (47%), Gaps = 36/388 (9%)
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
P H++ ++++LARAR F V LLT L+ + F +I + G RP+
Sbjct: 51 PRHLHDHPFAACVLYRLARARLFPLVPPLLTALR-TLRVPLQPTAFAALIDHLGAFSRPD 109
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A+ F + F S + + LL++LV N R D M + K V N + NI+
Sbjct: 110 AALLVFRAVPAF-CSHSNATFHALLHSLVCNGRVDAARDMLPEA-PKLGVRTNAVSYNII 167
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+K +C +D GA VLDEM + G+ P +VT T++G G++ A+++ ++ R
Sbjct: 168 LKGVCHRDGFSGARVVLDEMLARGLRPTVVTFNTLVGSACREGELAAAEQLMDEMARRSV 227
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+A TY +LM G GR DA K++ +ME +P+ YGV++ A +G R
Sbjct: 228 PPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRG 287
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L+ DM +RK P A +I LC+ GKV++A H
Sbjct: 288 LISDMRKRKLTPDDASYNVLIKCLCDAGKVDEA-----------------------HRAL 324
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
E ++ + G++PS TY L+ G CE+ + R+++ M+ G P T
Sbjct: 325 VEMQLKD----------GTVPSAATYRVLLDGCCEARDFDLGLRVFNAMLASGHCPLALT 374
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ L++G + G A+E +LE+M +G
Sbjct: 375 FRRLVRGLGEDGKAEEACFVLEQMGQRG 402
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 360 NAISSTII-HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
NA+S II +C A+ + DE RG P+++T+NTL+ C EL A +L
Sbjct: 160 NAVSYNIILKGVCHRDGFSGARVVLDEMLARGLRPTVVTFNTLVGSACREGELAAAEQLM 219
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D+M + V PN TY +L+QG C G + ++L +M + C P+ T++ +L+
Sbjct: 220 DEMARRSVPPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSACAAC 279
Query: 478 GNEGEV-GKVVSMATASGSVESDSWNFLLTRI--VSDLDSGAGALDELLVKN 526
G+ G + G + M + + S+N L+ + +D AL E+ +K+
Sbjct: 280 GDAGGIRGLISDMRKRKLTPDDASYNVLIKCLCDAGKVDEAHRALVEMQLKD 331
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 224/504 (44%), Gaps = 75/504 (14%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
+++ +Q F +A K N+ H+ TY ++IH L + + ++ E+ +NP
Sbjct: 70 VNVKMQFFRWAAK-RRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTE 128
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
V+R G A A+ F +I+ Q ++ N+++ L+ +Y+ VH ++
Sbjct: 129 LSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMS 188
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ P+ T + LI A CK + AI++L+EM +GM P +T ++ + D
Sbjct: 189 TEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDA 248
Query: 237 ENAKRVFGDILDRGWVPDATTYT-------------------------------VLMDGY 265
A +F ++ + PD TYT V M+
Sbjct: 249 HGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNM 308
Query: 266 I----KLGRLTDAVKVMDEME------------------------------------DNG 285
I K GRL DA+K+ EME ++G
Sbjct: 309 INFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 368
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P+ TY ++I+ FCK + +A LL++M ++ + P A C +ID L + + + AC
Sbjct: 369 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 428
Query: 346 ELWKRLLRKNCMPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
EL++ L ++NC +A + + +I L K G++ +A +FDE + G P + YN L++G
Sbjct: 429 ELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 487
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + L EA M E G P++ +YN+++ G K G + +L M P+
Sbjct: 488 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 547
Query: 464 KTSFSLLIEGLYESGNEGEVGKVV 487
S++ ++ L +G E K++
Sbjct: 548 VVSYNTVLGALSHAGMFEEASKLM 571
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 163/350 (46%), Gaps = 8/350 (2%)
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
SL E++ C ++F +IR G AGR + A F +++ + +N ++
Sbjct: 253 SLFEEMRHQ---YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMI 309
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK-KDDVEGAIRVLDEMPSMG 215
N L + R D +F+ + +P+V T N +IKAL + K + M G
Sbjct: 310 NFLGKAGRLDDAMKLFQEME-TLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 368
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P+ T++ ++ G+ +E A + ++ ++G+ P Y L+D K R A
Sbjct: 369 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 428
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ E+++N + Y VMI+ K + +A N+ D+M + P ++ L
Sbjct: 429 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 488
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
G +++A +R+ C+PD + I++ L K G A ++ ++ ++ P +
Sbjct: 489 ARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDV 548
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
++YNT++ + + EA +L +M G E ++ TY+ +++ K+ +
Sbjct: 549 VSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 36/326 (11%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VPNV N LI C D+E AI + M S G +PN+ T+T ++ G+ G +E A
Sbjct: 211 VPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMV 270
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ +++ G P+ TYT L+ G G L A +++ ME G+ PNE T V+I+A C
Sbjct: 271 LYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALC 330
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + EA+ L ++Q+ + + +ID LC+ GK + A L ++++ + +PD
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAH 390
Query: 362 ISSTIIHWLCKEGKIWEAKKLFD-----------------------EFER---------- 388
+ S++I LC+E K+ EA L + EF
Sbjct: 391 MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRM 450
Query: 389 ---GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
G P ++TY I C+ + +A + M++ GV PN+ TYN LI+G+ +G
Sbjct: 451 AAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLV 510
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLI 471
+ L+ M+D GC PN S+++L+
Sbjct: 511 SQAFSSLKNMIDNGCKPNDESYTVLL 536
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 162/333 (48%), Gaps = 10/333 (3%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP--NVFTCNILIKALCKKDDVEGAIR 206
+R LNTLL AL + H M + +P N+ T LI A C D+ A R
Sbjct: 43 IRCLNTLLMALAR-------HGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKR 95
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
L + G+ P+ +T+ + GY G +A R+F + RG TY L+ G
Sbjct: 96 HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
G + +A+ V M +G P+ Y +M+ C ++GEA LL D + + +VP+ A
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ +ID C G +E A +++K + K C+P+ + +I CK GK+ A L+
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E G P+++TY TLI G C L A RL M G+ PN +T +LI CK G
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+E + L ++ KG N+ ++ +I+ L +SG
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSG 368
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 196/448 (43%), Gaps = 41/448 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++I+ A A + L+ L + + + + + + Y G A +
Sbjct: 73 NLHTYTTLINAYCHAGDLPAAKRHLSSLLR-AGLAPDSHAYTSFVLGYCRTGLFAHACRL 131
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
FL + + R+ + LL L +F P+ +I++ LC
Sbjct: 132 FLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPD-GCAPDSHVYSIMVHGLC 190
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
A+ +L + G VPN+ + ++ GY GD+E A +F + +G +P+
Sbjct: 191 GAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVR 250
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT L+ G+ K G++ A+ + M + G+ PN VTY +I+ C A LL M
Sbjct: 251 TYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM 310
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P+ C +ID LC+ G++E+A + L++K + I +++I LCK GK
Sbjct: 311 EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKF 370
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE--------- 426
A L + G +P Y++LI G+C +L EA L +DM+E GV+
Sbjct: 371 DGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430
Query: 427 --------------------------PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
P+V TY + I+ +C+ G ++ ++ +M+D G
Sbjct: 431 IDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGV 490
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVS 488
PN T+++ LI+G N G V + S
Sbjct: 491 RPNLTTYNTLIKGY---ANLGLVSQAFS 515
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 5/298 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP + N L+ AL + G + ++ + + V NL T+TT++ Y GD+ AKR
Sbjct: 40 VPPIRCLNTLLMALAR----HGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKR 95
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+L G PD+ YT + GY + G A ++ M G TY +++ C
Sbjct: 96 HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
EA + M P S + ++ LC G+ +A L + K +P+ A
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + +I C G + A +F + +G +P++ TY LI G C+S ++ A L+ M
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+E G+ PNV TY LIQG C G+ + R+L M G PN+ + +LI+ L + G
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHG 333
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 165/354 (46%), Gaps = 20/354 (5%)
Query: 153 NTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
++++AL ++ ++D H LM K F VP+ + LI LC+++ + AI +L++M
Sbjct: 358 TSMIDALCKSGKFDGAHNLMQKIITEGF--VPDAHMYSSLIDGLCRENKLLEAISLLNDM 415
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ N V T ++ ++ ++ K + + G PD TYTV + Y + GR+
Sbjct: 416 IESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRM 475
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
DA +M +M D+GV PN TY +I+ + +A + L +M+ P+ +
Sbjct: 476 EDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535
Query: 332 IDLLCEEGK----VEDACELWK------------RLLRKNCMPDNAISSTIIHWLCKEGK 375
+ LL ++ V D+ LWK +++ C + + I L K +
Sbjct: 536 LGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDR 595
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EAK + ++ PS Y +I L EA R D MV++ P + +Y
Sbjct: 596 LEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRF 655
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+I C+ G+ I ++L K ++ ++ +LI+GL + GN + +++S
Sbjct: 656 IICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLS 709
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 173/408 (42%), Gaps = 75/408 (18%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQN--PEIKCGENLFITVIR 122
+AG + + + Y ++H L A RA +AV L + + P + ++ +I
Sbjct: 167 FAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA----VYNALID 222
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--------- 173
Y G ELA+ F ++ +VR+ L+ ++ + + +++
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282
Query: 174 ----------------NSRHKFKVV---------PNVFTCNILIKALCKKDDVEGAIRVL 208
+ H F+++ PN +TC +LI ALCK +E A + L
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+ G+ N V +T+++ G + A + I+ G+VPDA Y+ L+DG +
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+L +A+ ++++M ++GV+ N V + ++I+ + +S + + D M P
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
I C++G++EDA S +I + +
Sbjct: 463 TVFIRSYCQDGRMEDA------------------ESMMIQMI----------------DH 488
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
G P+L TYNTLI G +++A +M++ G +PN +Y +L+
Sbjct: 489 GVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 152/388 (39%), Gaps = 54/388 (13%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y S+I L ++ FD +L+ ++ + +++ ++I + A+
Sbjct: 353 NQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVP-DAHMYSSLIDGLCRENKLLEAISL 411
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + VQ + L++ ++ R D M + V P+V T + I++ C
Sbjct: 412 LNDMIESGVQANAVPFTILIDKHLREFRSDSPK-MISDRMAAAGVKPDVVTYTVFIRSYC 470
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ +E A ++ +M G+ PNL T+ T++ GY G + A +++D G P+
Sbjct: 471 QDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDE 530
Query: 257 TYTVLM-----------------------------------------------DGYI--- 266
+YTVL+ D +I
Sbjct: 531 SYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCL 590
Query: 267 -KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K+ RL +A + M+ + P+E Y MIE + K EA LD M++R Y+P
Sbjct: 591 SKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRL 650
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+I LCEEG A ++ +L K D +I L ++G + +L
Sbjct: 651 ESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSF 710
Query: 386 FERGSI-PSLLTYNTLIAGMCESAELTE 412
E + P Y+ L + ++E E
Sbjct: 711 MEEQNCRPGSAIYSRLTGEITVTSEAQE 738
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 35/437 (8%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
+ YH+ I L R + S L L N I C L G+ L+ F
Sbjct: 74 NCYHTAI-SLHRQMELKGIASNLVTL--NILINCFSQL-----------GQNPLSFSVFA 119
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFK--NSRHKFKVV---------PNVF 186
I K +V +L TL+ L Y L++ + K +R +++ PNV
Sbjct: 120 NILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVV 179
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N +I ++CK V A + EM S G+ P++VT++ ++ G+ G +++A +F +
Sbjct: 180 MYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM 239
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ PD T+ +L+DG+ K G++ + V M G++PN VTY +++ +C K+
Sbjct: 240 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 299
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A ++ + M Q P + +I+ C+ KV++A L+K++ KN +P+ +++
Sbjct: 300 NKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 359
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA--------GRLW 417
I LCK GKI A KL DE +RG P ++TY++++ +C++ ++ +A +++
Sbjct: 360 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 419
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+D+ KG +V+ Y ++IQGFC G E + +L +M D G P+ ++ ++I L++
Sbjct: 420 EDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKK 479
Query: 478 GNEGEVGKVVSMATASG 494
K++ A G
Sbjct: 480 DENDMAEKLLREMIARG 496
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V+T NIL+ CK ++ V M G+ PN+VT+ +++ GY + A +
Sbjct: 246 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSI 305
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F + G PD +Y ++++G+ K+ ++ +A+ + +M + PN VTY +I+ CK
Sbjct: 306 FNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCK 365
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL--------WKRLLRK 354
K A L+D+M R P ++D LC+ +V+ A L ++ L K
Sbjct: 366 SGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVK 425
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
D + +I C +G EA L + E G IP TY +I + + E A
Sbjct: 426 GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMA 485
Query: 414 GRLWDDMVEKGV 425
+L +M+ +G+
Sbjct: 486 EKLLREMIARGL 497
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 44/213 (20%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ +++ Y L + A F + + V +S N ++N + K+ D +FK
Sbjct: 286 YCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFK-KM 344
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG-------- 228
H ++PNV T LI LCK + A++++DEM G+ P+++T+++IL
Sbjct: 345 HCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 404
Query: 229 -----------------------------------GYVWRGDIENAKRVFGDILDRGWVP 253
G+ +G A + + D G +P
Sbjct: 405 DKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIP 464
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
DA TY +++ K A K++ EM G+
Sbjct: 465 DAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 348 WKRLL-RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
+ RLL +KN P I+ L K A L + E +G +L+T N LI
Sbjct: 47 FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFT-------------YNMLIQGFCKIGNAKEGIRIL 452
+ + + ++ ++++KG +PNV T Y LI G CK+G A+ +++L
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLL 166
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
+ K PN ++ +I+ +
Sbjct: 167 RRVDGKLVQPNVVMYNTIIDSM 188
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 198/410 (48%), Gaps = 17/410 (4%)
Query: 84 IIHKLARARAFD-AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK 142
+ H LA R F A+++L L+ +P L ++ + P L VK LR +
Sbjct: 101 LAHSLATTRFFSHALDALSHLLRLHPSHDALPTLLLSS-QTAPHPSLPGLLVKALLRHAR 159
Query: 143 FNVQRSVR-------------SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ N LL AL + R+D + + + +V PN T N
Sbjct: 160 LRDAFRAAHRAAAAGAPPDTVAFNALLAALSRAGRFDEL-WAARAVMARAEVRPNTHTFN 218
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
IL+ ALC+ +D E A L+E+ G P++VT+ T+L GY RG +++A +FG + R
Sbjct: 219 ILVTALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPR 278
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD ++TVLMDG K GRL DA ++ D M +GV P+ + Y V+I +C ++ EA
Sbjct: 279 GVEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREA 338
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
R LL +M+ VI+ + GK+ L L + + + +I
Sbjct: 339 RLLLMEMVGSGLSSEGFALRAVIESHVKVGKLLTCLNLVSPLRKYGVVIPLESYNCLIGA 398
Query: 370 LCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC++ + A+ LF E G PSL YN ++ +C+ + +A + +M + V P+
Sbjct: 399 LCEDMRPHAARGLFKWMVEDGHSPSLEMYNMILDCLCQCDSVDDALDVKVEMSSREVRPD 458
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
TY L+ C++G + +G ++ EM++ G PN+ + L+ G + G
Sbjct: 459 FHTYQALVTCLCRLGKSLDGKSVMAEMIESGLQPNEAICTALVCGFCKEG 508
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 358 PDNAISSTIIHWLCKEGK---IWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD + ++ L + G+ +W A+ + E P+ T+N L+ +C + A
Sbjct: 177 PDTVAFNALLAALSRAGRFDELWAARAVMARAEVR--PNTHTFNILVTALCRGEDAERAQ 234
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+++ E+G EP+V TYN L+ G+C+ G ++ + + M +G P+ S ++L++GL
Sbjct: 235 GFLEELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGL 294
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLLT 506
++G + ++ SG S ++ +++ L+
Sbjct: 295 CKAGRLNDARRMFDRMVHSGVSPDAIAYSVLIA 327
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 212/474 (44%), Gaps = 42/474 (8%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P ++ + N+ L+L+ F + P F + + + + L A+A +S L
Sbjct: 90 PSFFSELLKQLNNVFLSLRFFLWLSS-QPEFLPHPVSCNKLFDALLEAKACVPAKSFLYS 148
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ +PE EN IR G E AV TF +++ + V + N + ++
Sbjct: 149 FEFSPEPASLEN----YIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFG 204
Query: 164 RYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP---- 218
R DL+ +++ + ++ T LI+A C + V A +L + G+ P
Sbjct: 205 RTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDA 264
Query: 219 -------------------------------NLVTHTTILGGYVWRGDIENAKRVFGDIL 247
++ T+ I+ G+ A VF +
Sbjct: 265 FNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALK 324
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
DRG+ PD YT L+ G+ K+G+L DA K+ EM D G PNE +Y +I FCK
Sbjct: 325 DRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLD 384
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L ML Y ++ C +I LC G+ ++A + ++ + KN + D +T+I
Sbjct: 385 EAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLI 444
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
C+EGK+ ++ L E + +G PS +Y LI +C+ + EA +W+DM +G++
Sbjct: 445 QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQ 504
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
P V T + +I G C+ G EG+ L ML P K +F LI+ L + G E
Sbjct: 505 PMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKE 558
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 143/307 (46%), Gaps = 6/307 (1%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ +P+ +CN L AL + + + + S P + + G +E A
Sbjct: 118 EFLPHPVSCNKLFDALL---EAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEA 174
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE--VTYGVMI 297
F + + G+ P T+ +K GR K+ + M + GV+ + T G +I
Sbjct: 175 VYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLI 234
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+AFC K A +L L+ P + K+I C+E EL ++ KN
Sbjct: 235 QAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRN 294
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD II+ CK +A ++F+ +RG P ++ Y TLI G C+ +L +A +L
Sbjct: 295 PDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKL 354
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
W +M++KG PN ++YN LI GFCKIGN E +++ ++MLD G S + LI GL
Sbjct: 355 WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 414
Query: 477 SGNEGEV 483
G E
Sbjct: 415 HGRTDEA 421
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 168/374 (44%), Gaps = 42/374 (11%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N L +AL++ K + K+ + F+ P + I+ +C+ VE A+ D
Sbjct: 125 SCNKLFDALLEAK----ACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDM 180
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV--LMDGYIKL 268
+ G P + T + G + +++ +++ G D TV L+ +
Sbjct: 181 LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCND 240
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+++ A +++ + ++G+ P + +I FCK K L+ M+ + P
Sbjct: 241 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTY 300
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL-FDEFE 387
++I+ C+ A E++ L + PD + +T+IH CK G++ +A KL F+ +
Sbjct: 301 QEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMID 360
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP-------------------- 427
+G +P+ +YNTLI G C+ L EA +L+ M++ G +
Sbjct: 361 KGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDE 420
Query: 428 ---------------NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+V TYN LIQGFC+ G + +L+E+ KG P+ +S++ LI+
Sbjct: 421 AYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQ 480
Query: 473 GLYESGNEGEVGKV 486
L + G+ E ++
Sbjct: 481 KLCQLGSVQEAKEM 494
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 186/359 (51%), Gaps = 3/359 (0%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
++LF++ I + + LA ++ E V S N L+ LV D+ +F
Sbjct: 730 DDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 789
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ + P+ FT ++++ A+ K +E +++ +EM + G VT+ TI+ G V
Sbjct: 790 SEMK-RLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVK 848
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ A ++ ++ G+ P TY L+DG +K G + DA + DEM + G EPN
Sbjct: 849 SKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAI 908
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +++ + + + L + M+++ P VID LC +G++ D +K+L
Sbjct: 909 YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELT 411
PD + +IH L K G++ EA L+++ E +G P+L TYN+LI + ++ +
Sbjct: 969 DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAA 1028
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EAG+++++++ KG +PNVFTYN LI+G+ G+ + M+ GC PN +++ L
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 205/438 (46%), Gaps = 42/438 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+Y+++++ L + D + ++K+ P+ + + +R+ GL V+ +
Sbjct: 628 SYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRS-GLMKEALHTVREY 686
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ V RS S+++L+ +++ + +N ++ ++F I I+ CK
Sbjct: 687 ILQPDSKVDRS--SVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPI-IRHFCK 743
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A ++ + ++G+ ++ ++ G V I+ A+ +F ++ G PD T
Sbjct: 744 HKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFT 803
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +++D K R+ D +K+ +EM + G + VTY +I K K EA NL ++
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLM 863
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDA--------------------------------- 344
+ P+ ++D L ++G +EDA
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 345 --CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
CEL++ ++ + PD + +I LC +G++ + F + + G P L+TYN LI
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ +S L EA L++DM +KG+ PN++TYN LI K G A E ++ EE+L KG
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWK 1043
Query: 462 PNKTSFSLLIEGLYESGN 479
PN +++ LI G SG+
Sbjct: 1044 PNVFTYNALIRGYSVSGS 1061
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 169/363 (46%), Gaps = 3/363 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+IT++ G +G + + ++ +V S ++AL Q R D +F +
Sbjct: 314 YITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMK 373
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K ++P ++ N LI K D A+ + + M G PN TH + + G+
Sbjct: 374 QK-GIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A + + + +G VPD ++ G K GRL A +V E++ G+ P+ +TY +M
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ K + EA + +M++ + P +ID+L + G+ +A +++ L N
Sbjct: 493 IKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL 552
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
P + +T++ L +EGK+ E +L + S P+++TYNT++ +C++ E+ A
Sbjct: 553 EPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALD 612
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ M G P++ +YN ++ G K G E + +M K P+ + ++
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFV 671
Query: 476 ESG 478
SG
Sbjct: 672 RSG 674
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 190/418 (45%), Gaps = 14/418 (3%)
Query: 77 NYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N TY+ +I+ L ++ A D +++ + P ++ + ++ +G E
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAAD-GVVPTVRT----YSVLMLAFGKRRDAET 224
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
V +E V+ +V S + L Q R + + + + + P+V T +LI
Sbjct: 225 VVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEE-GCKPDVVTNTVLI 283
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ LC + A V +M + P+ VT+ T+L GD + ++ + G+
Sbjct: 284 QILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYN 343
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
+ +YT +D ++GR+ +A+ V DEM+ G+ P + +Y +I F K + A L
Sbjct: 344 DNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALEL 403
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M P+ I+ + G+ A + ++ + K +PD + +++ L K
Sbjct: 404 FNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAK 463
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ AK++F E + G P +TY +I +++ EA +++ +M+E P+V
Sbjct: 464 TGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLA 523
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
N LI K G E +I E+ + P +++ L+ GL G EG+V +V+ +
Sbjct: 524 MNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL---GREGKVKEVMQL 578
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F + + +VV +CN +++ + V +V D M + N+ T T+ G
Sbjct: 87 LFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAV 146
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G + +A + + G V +A TY L+ +K G +A+ V M +GV P
Sbjct: 147 GVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTV 206
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
TY V++ AF K + + LL +M R P+ I +L + G++E+A + ++
Sbjct: 207 RTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRK 266
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAE 409
+ + C PD ++ +I LC G++ +AK +F + + P +TY TL+ +S +
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+W+ + G NV +Y + C++G E + + +EM KG P + S++
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386
Query: 470 LIEGLYES 477
LI G ++
Sbjct: 387 LISGFLKA 394
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 13/377 (3%)
Query: 127 AGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
A PE A++ FL + + V + S N +L + + R V +F + + + NV
Sbjct: 78 AADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQI-IKANV 136
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T + A+ + + A L M G+V N T+ ++ V G A V+
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKA 196
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G VP TY+VLM + K V ++ EME GV PN +Y + I + +
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA +L M + P +I +LC+ G++ DA +++ ++ + PD T
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316
Query: 366 IIHWLCKEG------KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++ G +IW A K G ++++Y + +C+ + EA ++D+
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALK-----ADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +KG+ P ++YN LI GF K + + M G PN + L I +SG
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 480 EGEVGKVVSMATASGSV 496
+ K + + G V
Sbjct: 432 SLKALKRYELMKSKGIV 448
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 158/333 (47%), Gaps = 2/333 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VP+V N ++ L K + A RV E+ +MG+ P+ +T+T ++ + + A
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F ++++ PD L+D K GR +A K+ E+++ +EP + TY ++
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL 566
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K E LL+ M + P+ V+D LC+ G+V A ++ + CMPD
Sbjct: 567 GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDL 626
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA-GRLWDD 419
+ +T+++ L KEG++ EA +F + ++ P T T++ S + EA + +
Sbjct: 627 SSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREY 686
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+++ + + + + L++G K ++ I E + G + S +I +
Sbjct: 687 ILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKE 746
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
++V G S+++ S+N L+ +V +
Sbjct: 747 ALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 1/204 (0%)
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q + V ++ C +++L+ G+V D +++ + R+ + T+ + EG +
Sbjct: 94 QPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLR 153
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A E G + + TYN LI + +S EA ++ M GV P V TY++L+
Sbjct: 154 SAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLM 213
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
F K +A+ + +L EM +G PN S+++ I L ++G E +++ G
Sbjct: 214 LAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCK 273
Query: 497 ESDSWNFLLTRIVSDLDSGAGALD 520
N +L +I+ D A A D
Sbjct: 274 PDVVTNTVLIQILCDAGRLADAKD 297
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 211/435 (48%), Gaps = 38/435 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ L + + F+ ++ E+ + + E +++ G+ A R
Sbjct: 298 TYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPT-EAALSSLVEGLRRKGKVVDAFDLVNR 356
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++K S+ N L+N+L ++ ++D L+FK K + N T +ILI + C++
Sbjct: 357 VKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEK-GLCANDVTYSILIDSFCRRG 415
Query: 200 DVEGAIRVL-----------------------------------DEMPSMGMVPNLVTHT 224
++ AI L DEM G+ P +V++T
Sbjct: 416 KLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYT 475
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ GY +G + A R++ ++ +G P+ T+T L+ + R+TDA ++ DEM +
Sbjct: 476 SLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ 535
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+ PNEVTY VMIE CK + +A LL+ M+Q+ VP + +I LC G+V +A
Sbjct: 536 NMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEA 595
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
+ L R++ + S ++H CKEG++ +A + E +RG L+ Y LI G
Sbjct: 596 KKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDG 655
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + + L +M ++ + P+ Y +I G+ K G+ K+ I + M+D+GC PN
Sbjct: 656 TIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPN 715
Query: 464 KTSFSLLIEGLYESG 478
+++ LI L ++G
Sbjct: 716 IVTYTTLINELCKAG 730
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 229/494 (46%), Gaps = 52/494 (10%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL----KQNPE------ 109
AL+ F++ G H NF+H+ ++ +IH L A F SLL L +P
Sbjct: 88 ALRFFNFLG-LHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEAL 146
Query: 110 IKCGENL-------FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ C E F +I++Y R +V F + + + VR+L +LN L +
Sbjct: 147 LDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKI 206
Query: 163 KRYDLVHLMF-------------------------KNSRHKFKVVP-------NVFTCNI 190
+R D+V ++F KN +++ NV N+
Sbjct: 207 RRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNV 266
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI LCK V A+ + + + G+ + VT+ T++ G + E V ++++ G
Sbjct: 267 LIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG 326
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+VP + L++G + G++ DA +++ ++ G P+ Y +I + CK K EA
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L +M ++ + +ID C GK++ A +++ +++I+
Sbjct: 387 LLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK G + A FDE ++G P++++Y +LI+G C +L EA RL+ +M KG+ PN
Sbjct: 447 CKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNT 506
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+T+ LI + + R+ +EML++ PN+ +++++IEG + GN + ++++
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566
Query: 490 ATASGSVESDSWNF 503
G V D++ +
Sbjct: 567 MVQKGLV-PDTYTY 579
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 206/413 (49%), Gaps = 13/413 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
T +++ LA+ R D V L E+ P+I +++ VIR++ A +
Sbjct: 195 TLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIY----IYVAVIRSFCELKNFAKAKEM 250
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
R+E ++ +V N L++ L +NKR ++ V + KN + + + T L+ L
Sbjct: 251 IQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEI--KNGLIQKGLTASEVTYCTLVLGL 306
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK + E V+DEM +G VP ++++ G +G + +A + + G +P
Sbjct: 307 CKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSL 366
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L++ K G+ +A + EM + G+ N+VTY ++I++FC+ K A + L
Sbjct: 367 FVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGK 426
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+ + +I+ C+ G + A + ++ K P +++I C +GK
Sbjct: 427 MIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGK 486
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EA +L+ E +G P+ T+ TLI+ + + +T+A RL+D+M+E+ + PN TYN+
Sbjct: 487 LHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNV 546
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+I+G CK GN + +L +M+ KG P+ ++ LI L +G E K +
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFI 599
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 213/472 (45%), Gaps = 41/472 (8%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKF-HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
L+ R+ LD A+ H+ GK Y+S+I+ + A S E+
Sbjct: 407 LIDSFCRRGKLDTAI---HFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM- 462
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
+ +K + ++I Y G+ A + + + + + + TL++AL + R
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+F + ++PN T N++I+ CK+ + A +L++M G+VP+ T+
Sbjct: 523 TDAFRLFDEMLEQ-NMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G + AK+ D+ + + Y+ L+ GY K GRL DA+ V EM G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V+ + V Y V+I+ K + + LL +M ++ P + +ID + G V+ A
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCK--------------------------------- 372
+W ++ + C P+ +T+I+ LCK
Sbjct: 702 GIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHL 761
Query: 373 --EGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
EG + +A +L ++ +G + + ++YN L+ G C+ + EA +L D+M++ + P+
Sbjct: 762 AREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCI 821
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
TY+ +I C+ GN I + ML+KG P+ +++ LI G +G G+
Sbjct: 822 TYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGK 873
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 193/438 (44%), Gaps = 10/438 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFH-YAGKFHPNFSHNYDTYHSIIHKLARA-RAFDA 96
P + L+S + L A +++H GK + N T+ ++I L RA R DA
Sbjct: 469 PTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK---GIAPNTYTFTTLISALFRANRMTDA 525
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L+QN + E + +I + G A + ++ + + + L+
Sbjct: 526 FRLFDEMLEQN--MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLI 583
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
++L R F + H+ N + L+ CK+ + A+ V EM G+
Sbjct: 584 SSLCSTGRVCEAK-KFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+LV + ++ G + D + ++ D+ PD YT ++DGY K G + A
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFG 702
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ D M D G PN VTY +I CK +A L +ML P+ C +D L
Sbjct: 703 IWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLA 762
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLL 395
EG +E A +L +L K + + + ++ CK G++ EA KL DE +I P +
Sbjct: 763 REGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCI 821
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY+T+I C L A WD M+ KG++P+ YN LI G C G + + ++M
Sbjct: 822 TYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM 881
Query: 456 LDKGCFPNKTSFSLLIEG 473
+ +G PN+ + L G
Sbjct: 882 IRRGVKPNQATHKSLSHG 899
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 224/432 (51%), Gaps = 20/432 (4%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E
Sbjct: 23 KNSEHALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
++++ +I +YG G + +VK F ++E+ V+R+++S + L +++ R+ + F N
Sbjct: 81 DMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N++I VE A R ++M S + P+++T+ T++ GY
Sbjct: 140 KMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ + P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIA 402
+ + +I CK G+ +A KL D+ I PS YN ++
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPS--AYNPIVE 377
Query: 403 GMCESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+C + + ++A L +++ GV+ P N LI+G + G+ +L+ ML +
Sbjct: 378 YLCNNGQTSKAEALVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVG 435
Query: 462 PNKTSFSLLIEG 473
K+++ L++
Sbjct: 436 SEKSAYDSLVQS 447
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 2/355 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G ++A F + ++ +V + + L++ +N + +F + +VP+ FT
Sbjct: 502 GNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDE-NIVPSDFT 560
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
NI I LCK A +L + G VP +T+ +I+ G++ G + +A + ++
Sbjct: 561 YNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMC 620
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ G P+ TYT L++G+ K A+K+ +EM + G+E + YG +I+ FCK +
Sbjct: 621 ESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIE 680
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A L ++L P+S + +I +E A L KR+L + D +T+I
Sbjct: 681 TASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L KEG++ A L+ E +G IP ++ Y LI G+C +L A ++ +M +
Sbjct: 741 DGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSIT 800
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
PNV YN LI G K GN +E R+ EMLDKG PN T++ +LI G + GN
Sbjct: 801 PNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSA 855
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 193/370 (52%), Gaps = 13/370 (3%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
++ ++ +Y A + A+ F R+ + ++ ++ LN LL ALV+N M +
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKND-------MIYEA 228
Query: 176 RHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
R ++ V + FT +I+++A K ++ E A + E S G+ + ++ ++
Sbjct: 229 REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA 288
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
+ D+E A + D+ D+GWVP T+T ++ +K G + +A+++ DEM GV+ N
Sbjct: 289 FCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMN 348
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
V +++ +CK K A D M + P+ +I+ C+ G + A +L+
Sbjct: 349 VVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYT 408
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAE 409
++ KN P I +++I K EA KLFDE I ++ TYN+L++ +C+ +
Sbjct: 409 QMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGK 468
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
++EA LW M++KG+ P +YN +I G C+ GN + +MLD G PN ++S+
Sbjct: 469 MSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSI 528
Query: 470 LIEGLYESGN 479
L++G +++G+
Sbjct: 529 LMDGYFKNGD 538
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 157/298 (52%), Gaps = 1/298 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+ N+FT N L+ LCK+ + A + +M G+ P V++ +++ G+ +G+++ A
Sbjct: 450 IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAAS 509
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF D+LD G P+ TY++LMDGY K G A V D M D + P++ TY + I C
Sbjct: 510 VFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLC 569
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K ++ EA+++L +++ +VP ++D +EG V A ++ + P+
Sbjct: 570 KVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVI 629
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T+I+ CK A K+ +E +G + Y LI G C+ ++ A L+ ++
Sbjct: 630 TYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSEL 689
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++ G+ PN YN LI G+ + N + + + + ML +G + +++ LI+GL + G
Sbjct: 690 LDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEG 747
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 168/310 (54%), Gaps = 4/310 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
+I+I+A CK DVE A +L +M G VP+ T T+++G V +G++ A R+ +++
Sbjct: 283 SIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVS 342
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G + T L+ GY K +L A++ D+M +NG PN VTY V+IE CK +
Sbjct: 343 CGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAK 402
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STII 367
A +L M + P+ + +I + E+A +L+ + C N + ++++
Sbjct: 403 AYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVA--CDIANIFTYNSLL 460
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
WLCKEGK+ EA L+ + ++G P+ ++YN++I G C L A ++ DM++ G++
Sbjct: 461 SWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLK 520
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PNV TY++L+ G+ K G+ + + + M+D+ P+ ++++ I GL + G E +
Sbjct: 521 PNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDM 580
Query: 487 VSMATASGSV 496
+ G V
Sbjct: 581 LKKFVEKGFV 590
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 1/285 (0%)
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ +L Y+ + +A F +++ VP L+ +K + +A +V ++M
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
GV + T +M+ A K EA+ + R +A VI C+ VE
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLI 401
AC L K + K +P +++I K+G + EA +L DE G +++ TL+
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G C+ +L A +D M E G PN TY +LI+ CK GN + + +M +K
Sbjct: 357 KGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNIC 416
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
P + LI G + + E K+ A A ++N LL+
Sbjct: 417 PTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLS 461
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 201/410 (49%), Gaps = 14/410 (3%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
Y + +++ N +Y ++ +A F LL E+K N ++ + T+IR
Sbjct: 18 YRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNG-VRPNVVIHTTIIRGLC 76
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKV 181
AG+ A+ F RI + + +V + +TL++AL ++ + Y LV M K
Sbjct: 77 TAGKVSQALLHFRRIGE-DCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKG-----C 130
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PNV T N LI K + ++ + +L EM G +++T+T IL + I+ A R
Sbjct: 131 SPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYR 190
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ + R V + +T L + R T+A+ ++++M G PN+V Y ++ C
Sbjct: 191 LLNALEKRNVVTYNSLFTALSTA--EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLC 248
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + EA +L M + ++ G+ D+ EL R+L + D
Sbjct: 249 KNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTK 308
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +IH CK G + EA +LF ++RGSIPS +TYNTLI C++ + A +L M
Sbjct: 309 TMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
++ +PNV TYN +I+ FC+ +E I + M+D GCFP++ S++ L
Sbjct: 369 IQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 176/410 (42%), Gaps = 73/410 (17%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+L V +KR+ + + RH+ N + IL++ CK + + A+ +LDEM
Sbjct: 1 MLQIFVDSKRHRDGYEFY---RHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMK 57
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENA----KRVFGD----------------------- 245
S G+ PN+V HTTI+ G G + A +R+ D
Sbjct: 58 SNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTYSTLVDALCKSGQPHE 117
Query: 246 -------ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
++ +G P+ TY L+DG+ KL RL + + ++ EM G + +TY ++++
Sbjct: 118 AYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILD 177
Query: 299 AFCK---------------------------------GKKSGEARNLLDDMLQRKYVPSS 325
FCK G ++ EA +LL+ M+Q P+
Sbjct: 178 IFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQ 237
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
V+ +LC+ ++++A ++ + + C D+ ++ G+ +++ +L
Sbjct: 238 VNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGR 297
Query: 386 -FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
G I T N +I C++ +L EA +L+ M ++G P+ TYN LI FCK
Sbjct: 298 MLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQ 357
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+++L +M+ PN +++ +I+ E E + M +G
Sbjct: 358 PDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNG 407
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 35/237 (14%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
NEV+YG++++ FCK G+ + A EL
Sbjct: 29 NEVSYGILMQGFCKA-----------------------------------GEFQQALELL 53
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESA 408
+ P+ I +TII LC GK+ +A F P++ TY+TL+ +C+S
Sbjct: 54 DEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTYSTLVDALCKSG 113
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ EA L +MV+KG PNV TYN LI GF K+ E + +L+EM +GC + +++
Sbjct: 114 QPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYT 173
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVK 525
++++ ++ + E ++++ V +S L+ D + A +L E +++
Sbjct: 174 MILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQ 230
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 146/316 (46%), Gaps = 10/316 (3%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPEL 132
S N TY+++I + D V LL E+ Q C ++ + ++ + +
Sbjct: 131 SPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRG---CRADVITYTMILDIFCKNNSIDE 187
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + +EK NV + SL T L+ ++ + + L+ K + + PN ++
Sbjct: 188 AYRLLNALEKRNVV-TYNSLFTALSTAEGDRTTEALSLLEKMIQEGTR--PNQVNYRTVL 244
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK ++ A +VL M S G + V++ ++ + G ++ + G +L G++
Sbjct: 245 LMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYI 304
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
D T V++ + K G L +A ++ M G P+ VTY +I AFCK ++ A L
Sbjct: 305 LDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKL 364
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M+Q + P+ +I C E + E+A +++ ++ C PD +S T +
Sbjct: 365 LHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDR-VSYTTLKLSKN 423
Query: 373 EGKIWEAKKLFDEFER 388
E I++ +K+ D + R
Sbjct: 424 EAAIYD-QKVHDTYLR 438
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 221/513 (43%), Gaps = 85/513 (16%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNP--------- 108
D A+ +F A F P+ + H ++ A A + SLL+ P
Sbjct: 107 DAAVHLFRLA-PFPPSLLAHAQLLHILVRARRSADARAILASLLSARPPAPPLFPHLVEV 165
Query: 109 --EIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
E F ++R AG+ + A++ F + + S+RS N++LN L Q
Sbjct: 166 YKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLG 225
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+F+ + + +P+ FT I+ KA CK V A+ ++EM MG+ NLV + +
Sbjct: 226 ATVAVFEQMQ-RAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAV 284
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL------------------------- 261
+ GY G +A+R+ + RG+ P+ TYT+L
Sbjct: 285 MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344
Query: 262 -----------MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
++GY ++GR+ DA ++++EM D+ ++ N Y +MI +CK + EA
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404
Query: 311 NLLDD-----------------------------------MLQRKYVPSSALCCKVIDLL 335
N+L + ML+ + ++ ++
Sbjct: 405 NILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGF 464
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSL 394
C G ++DA LW +L+K P+ ST++ K GK +A L+ E RG +
Sbjct: 465 CSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNT 524
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T+NT+I G+C+ + EA L D M + P++ TY L G+CKIG+ RIL E
Sbjct: 525 TTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNE 584
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ + G P F+ LI G + + G+V ++
Sbjct: 585 LENLGFAPTIEFFNSLITGHFIAKQHGKVNDIL 617
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 202/447 (45%), Gaps = 38/447 (8%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
FS N TY ++ + + E ++ E+++N ++ E +F VI Y GR E A
Sbjct: 309 FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDA 368
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ LLN +V ++ + N+F NI+I
Sbjct: 369 AR-------------------LLNEMVDSR-----------------LQVNLFVYNIMIN 392
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK + A +L EM +G+ P+ ++ +++ GY +G + A + +L G+
Sbjct: 393 GYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAA 452
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY L+ G+ LG + DA+++ M G+ PNE++ +++ F K K+ +A NL
Sbjct: 453 TTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLW 512
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ L R ++ VI+ LC+ ++ +A EL ++ + C PD T+ CK
Sbjct: 513 KETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKI 572
Query: 374 GKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + A ++ +E E G P++ +N+LI G + + + + +M +G+ PN Y
Sbjct: 573 GDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAY 632
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
LI G+CK G+ + EM++KG PN S L+ Y G E V+
Sbjct: 633 GALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVG 692
Query: 493 SGSVESDSWNFL-LTRIVSDLDSGAGA 518
+ + S L + ++ + +D+ AG
Sbjct: 693 TDMIPDISAPRLEIGKVANFIDTVAGG 719
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 184/399 (46%), Gaps = 63/399 (15%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S +TLL+ ++ + + ++K + + + N T N +I LCK + + A ++D+
Sbjct: 491 SCSTLLDGFFKSGKTEKALNLWKETLAR-GLAKNTTTFNTVINGLCKIERMPEAEELVDK 549
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M P+++T+ T+ GY GD++ A R+ ++ + G+ P + L+ G+ +
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
++ EM + G+ PN V YG +I +CK A NL +M+++ VP+ +C
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSS 669
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPD------------NAISST------------- 365
++ +GK ++A + + L+ + +PD N I +
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWN 729
Query: 366 -IIHWLCKEGKIWEAKKLF----------DEFERGSI----------------------- 391
+I LCK G+I +AK L D F S+
Sbjct: 730 IVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789
Query: 392 ---PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
P+++TYN+LI G+C+S EL+ A L+ + KG+ PN TYN LI CK G E
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEA 849
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
++ + M+++G P ++S+LI GL G E K++
Sbjct: 850 FKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLL 888
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 199/404 (49%), Gaps = 18/404 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
+ N T++++I+ L + E L+ ++KQ +C ++ + T+ Y G +
Sbjct: 520 LAKNTTTFNTVINGLCKIERMPEAEELVDKMKQ---WRCPPDIITYRTLFSGYCKIGDMD 576
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNI 190
A + +E ++ N+L+ K++ V+ ++F+ S PN
Sbjct: 577 RASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLS--PNTVAYGA 634
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI CK+ D+ A + EM G+VPNL ++++ + +G + A V +++
Sbjct: 635 LIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTD 694
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+PD + +++G++ + + D + ++ + ++I CK + +A+
Sbjct: 695 MIPDISA------PRLEIGKVANFI---DTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
NLL D+ + +V + +I G V+ A +L +L P+ +++I+ L
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK G++ A LF + + +G P+ +TYNTLI C+ +TEA +L M+E+G+ P V
Sbjct: 806 CKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTV 865
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
FTY++LI G C G +E I++L++M++ PN ++ LI+G
Sbjct: 866 FTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQG 909
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 220/434 (50%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFXWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR L +M+ + P+ +++ ++I C+ G ++ A ++ K + R +
Sbjct: 265 LCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K+
Sbjct: 383 GQAAKAETLVRQLLKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSX 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 204/406 (50%), Gaps = 12/406 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +++ L++ + + L+ E+ N + + +I + G L V+ F
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEM-LNSGLNVSAYTYNPLINGFCQKG---LFVEAFDL 307
Query: 140 IEKFNVQRSVRSL---NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+E+ +R+ +L NTL+ L + + V L F + K K P++ + N L+ C
Sbjct: 308 VEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDML-KSKFTPDIVSFNSLLYGYC 366
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A + DE+ +VP ++T+ T++ G G ++ A R+ ++ D+G PD
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF 426
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT+L++G KLG ++ A +EM G++P+ Y I K + A ++ ++M
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEM 486
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L + P + LC++G E+AC+L + ++ +PD+ ++II+ K G +
Sbjct: 487 LAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A+++F+E +G PS++TY LI L A + M+EK V NV TYN +
Sbjct: 547 RKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
I G C E + +EM +KG PNK S+++LI ES N G
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN---ESCNMG 649
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 162/294 (55%), Gaps = 1/294 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+V CN +++ L ++ + A V M G+ P +VT+ T+L Y G ++ A
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL 235
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ +RG P+ TY VL++G K G L A +++EM ++G+ + TY +I F
Sbjct: 236 ELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGF 295
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ EA +L+++M+ R+ P+ + ++ LC+ +V + +L+ PD
Sbjct: 296 CQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDI 355
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++++ C+ G I EA LFDE + R +P+++TYNTLI G+C L A RL +
Sbjct: 356 VSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE 415
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
M ++G+ P++FTY +L+ G K+G EML KG P++ +++ I G
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 160/320 (50%), Gaps = 1/320 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+F + P V T N ++ + CK+ V+ A+ +L EM G PN VT+ ++ G +G++E
Sbjct: 208 QFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELE 267
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
AK + ++L+ G A TY L++G+ + G +A +++EM + P TY ++
Sbjct: 268 QAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + R DML+ K+ P ++ C G + +A L+ L ++ +
Sbjct: 328 YGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLV 387
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P +T+IH LC G + A +L E ++G P + TY L+ G + ++ A
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+++M+ KG++P+ F YN I G KI + + EEML G P+ ++++ + L +
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507
Query: 477 SGNEGEVGKVVSMATASGSV 496
GN E ++ + G +
Sbjct: 508 QGNFEEACDLLENMVSDGLI 527
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N+ + ALC++ + E A +L+ M S G++P+ VT+T+I+ G+V G + A+ V
Sbjct: 493 PDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREV 552
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L +G P TYTVL+ + L A +M + V N +TY +I C
Sbjct: 553 FNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCM 612
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA D+M ++ +P+ +I+ C G E+A L++ +L + PD+
Sbjct: 613 TRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFT 672
Query: 363 SSTIIHWLCKEGKI 376
S + L ++ ++
Sbjct: 673 HSVFLKNLHRDYQV 686
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 38/257 (14%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ F N I K D A + +EM + G P+++T+ + +G+ E A +
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ G +PD TYT +++G++K G L A +V +EM GV P+ VTY V+I A
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA--- 574
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A+ +LD A + ++L K+ +P N I
Sbjct: 575 ----HAAKQMLD----------------------------LAFMYFSKMLEKS-VPANVI 601
Query: 363 S-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + II+ LC ++ EA K FDE E+G +P+ +Y LI C EA RL+ +M
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 421 VEKGVEPNVFTYNMLIQ 437
+++ ++P+ FT+++ ++
Sbjct: 662 LDRKIQPDSFTHSVFLK 678
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 93/164 (56%), Gaps = 1/164 (0%)
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ D M++ +P C +++ +L +E + A ++ + + P +T++ C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ +A +L E ERG P+ +TYN L+ G+ + EL +A L ++M+ G+ + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
TYN LI GFC+ G E ++EEM+++ FP ++++ L+ GL
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+FD+ R G +P + N ++ + + L++A ++ M + G++P V TYN ++ +C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESD 499
K G + + +L EM ++GC+PN ++++L+ GL + G E G + M + +V +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 500 SWNFLL 505
++N L+
Sbjct: 287 TYNPLI 292
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 224/505 (44%), Gaps = 75/505 (14%)
Query: 56 NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
+++ +Q F +A K N+ H+ TY ++IH L + + ++ E+ +NP
Sbjct: 1092 GVNVKMQFFRWAAKRR-NYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPT 1150
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
V+R G A A+ F +I+ Q ++ N+++ L+ +Y+ VH ++
Sbjct: 1151 ELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEM 1210
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ P+ T + LI A CK + AI++L+EM +GM P +T ++ + D
Sbjct: 1211 STEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFND 1270
Query: 236 IENAKRVFGDILDRGWVPDATTYT-------------------------------VLMDG 264
A +F ++ + PD TYT V M+
Sbjct: 1271 AHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 1330
Query: 265 YI----KLGRLTDAVKVMDEME------------------------------------DN 284
I K GRL DA+K+ EME ++
Sbjct: 1331 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 1390
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ P+ TY ++I+ FCK + +A LL++M ++ + P A C +ID L + + + A
Sbjct: 1391 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 1450
Query: 345 CELWKRLLRKNCMPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
CEL++ L ++NC +A + + +I L K G++ +A +FDE + G P + YN L++
Sbjct: 1451 CELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 1509
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+ + L EA M E G P++ +YN+++ G K G + +L M P
Sbjct: 1510 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 1569
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVV 487
+ S++ ++ L +G E K++
Sbjct: 1570 DVVSYNTVLGALSHAGMFEEASKLM 1594
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 162/348 (46%), Gaps = 8/348 (2%)
Query: 99 SLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
SL E++ C ++F +IR G AGR + A F +++ + +N ++
Sbjct: 1276 SLFEEMRHQ---YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMI 1332
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV-LDEMPSMG 215
N L + R D +F+ + +P+V T N +IKAL + + + M G
Sbjct: 1333 NFLGKAGRLDDAMKLFQE-METLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 1391
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P+ T++ ++ G+ +E A + ++ ++G+ P Y L+D K R A
Sbjct: 1392 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 1451
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ E+++N + Y VMI+ K + +A N+ D+M + P ++ L
Sbjct: 1452 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 1511
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
G +++A +R+ C+PD + I++ L K G A ++ ++ ++ P +
Sbjct: 1512 ARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDV 1571
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
++YNT++ + + EA +L +M G E ++ TY+ +++ K+
Sbjct: 1572 VSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 1619
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 4/344 (1%)
Query: 153 NTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N +LNA+ + D V L+ K + F ++ + N ++K LC ++DEM
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAF--FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ PN+VT T++G G E V + + G PD Y ++DG K G L
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A ++++ M G++PN V Y +++ C ++ EA LL +M Q+ +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GS 390
+D C+ G V+ EL +++L CMPD +T+I+ CKEG I EA L G
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+ ++Y ++ G+C + +A L M+++G PN T+N LI CK G ++ I
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L++ML GC P+ S+S +I+GL ++G E +++++ G
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 194/387 (50%), Gaps = 9/387 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T++++I L R F+ V +L ++ ++ P+I+ ++ T+I G E+A
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR----MYATIIDGICKEGHLEVA 305
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R+ + ++ +V NT+L L +R+ + K + +V T NIL+
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVD 364
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ V+ I +L++M S G +P+++T+TT++ G+ G I+ A + + G P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ +YT+++ G GR DA ++M +M G PN VT+ +I CK +A LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
ML P VID L + GK E+A EL ++ K P+ I S+I L +E
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 374 GKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ + ++FD + +I S + YN +I+ +C+ E A + MV G PN TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKG 459
MLI+G G AKE +L E+ +G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 206/420 (49%), Gaps = 7/420 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
+Y++++ L A+ + VE L+ E+ + + C N+ F T+I G E +
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR---VDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + +R T+++ + + ++ + + N + + PNV N ++K LC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL-NRMPSYGLKPNVVCYNTVLKGLCS 333
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A +L EM + VT ++ + G ++ + +L G +PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT +++G+ K G + +AV ++ M G +PN V+Y ++++ C + +A L+ M+
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q+ P+ +I+ LC++G VE A EL K++L C PD ST+I L K GK
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA +L + +G P+ + Y+++ + + + +++D++ + + + YN +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK I M+ GC PN++++++LI+GL G E +++S + G++
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 190/413 (46%), Gaps = 12/413 (2%)
Query: 81 YHSIIHKLARARAF-DAVESLLTELKQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFL 138
YH I+ R+ F ++V L + + G NL + I G AV
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE---AVGLLR 205
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ F + + S N +L L KR+ D+ LM + + PN+ T N LI LC+
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELM--DEMVRVDCAPNIVTFNTLIGYLCR 263
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
E VL +M G P++ + TI+ G G +E A + + G P+
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++ G R +A +++ EM ++VT+ ++++ FC+ LL+ ML
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+P VI+ C+EG +++A L K + C P+ + ++ LC G+
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A++L + ++G P+ +T+NTLI +C+ + +A L M+ G P++ +Y+ +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G K G +E + +L M++KG PN +S + L EG V KV+ M
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL---SREGRVNKVIQM 553
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 2/332 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T +++ LC + + A+ VLDEM G P + IL G N+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RV + +G D ++++ + G + +AV ++ ++ G E + V+Y +++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ G+ L+D+M++ P+ +I LC G E E+ ++ C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CKEG + A ++ + G P+++ YNT++ G+C + EA L +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + T+N+L+ FC+ G I +LE+ML GC P+ +++ +I G + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVS 510
E ++ SM++ + S+ +L + S
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 152/364 (41%), Gaps = 45/364 (12%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
R+Y ++ I ++ +L++A +I + + N Y++++ L A + E L
Sbjct: 287 RMYAT-IIDGICKEGHLEVANEILNRMPSY--GLKPNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 101 LTELKQNP------------EIKCGENL----------------------FITVIRNYGL 126
L+E+ Q + C L + TVI +
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNV 185
G + AV + + + S +L L R+ D LM + + PN
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP--PNP 461
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N LI LCKK VE AI +L +M G P+L++++T++ G G E A +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++++G P+ Y+ + + GR+ +++ D ++D + + V Y +I + CK +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL-----LRKNCMPDN 360
+ A + M+ +P+ + +I L EG ++A EL L LRK+ M
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHF 641
Query: 361 AISS 364
IS+
Sbjct: 642 GISN 645
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 291 VTYGVMIEAFCKGKKS--------------------------------GEARNLLDDMLQ 318
V Y M+ +C+ + +A +LD+M
Sbjct: 80 VAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF 139
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P + +++ C G ++ + + + K C D + +++ +C++G + E
Sbjct: 140 KGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE 199
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L + G +++YN ++ G+C + + L D+MV PN+ T+N LI
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
C+ G + +L +M + GC P+ ++ +I+G+ + G+
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ YN ++AG C + +L A RL + V PN +T+ +++G C G + + +L+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD- 511
EM KGC P + +++E SG +V+ A G ++++ + N +L I
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 512 -LDSGAGALDELLVKNC 527
+D G L +L C
Sbjct: 196 CVDEAVGLLRKLAFFGC 212
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 171/319 (53%), Gaps = 2/319 (0%)
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F I K ++ + S NTL+N L +++ D K + + ++ P+VFT ++LI LC
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLD-EGFRLKKTMEENRIYPDVFTYSVLIHGLC 304
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ ++ A ++ DEM G+ PN +T T ++ G +++A + +L G PD
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLV 364
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L++G K+G + A K++DEM+ G++P+++TY +I+ +CK A + M
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ V + +I C +G+V DA + ++ PD+A + +I CK+G +
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
KL E + G P ++TYN L+ G+C+ ++ A L + M+ GV P+ TYN+L
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Query: 436 IQGFCKIGNAKEGIRILEE 454
++G CK G A++ +++ E
Sbjct: 545 LEGHCKNGKAEDLLKLRNE 563
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 201/452 (44%), Gaps = 19/452 (4%)
Query: 72 PNFSHNYDTY----------------HSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
P F H +Y SII L + D+ S+ + +C
Sbjct: 95 PTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNF 154
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F ++ Y +G A++ F + N Q LL+ ++ N + F +
Sbjct: 155 VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMI-NSNSPVTIWTFYSE 213
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
++ P V NILI CK+ + A + +E+ G+ P V+ T++ G +
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ R+ + + PD TY+VL+ G K GRL A ++ DEM+ G+ PN +T+
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ + ++ A N ML P + +++ LC+ G V A +L +
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +T+I CKEG + A ++ E G + + + LI+G C + +A
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
R +MVE G++P+ TY M+I G+CK GN K G ++L+EM G P ++++L+ GL
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513
Query: 475 YESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
+ G ++ G D ++N LL
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 175/351 (49%), Gaps = 2/351 (0%)
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ I ++ V+ N L+N + L+F R K + P + N LI LC
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR-KRGLRPTTVSFNTLINGLC 269
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +++ R+ M + P++ T++ ++ G G ++ A+++F ++ RG P+
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+DG + R+ A+ +M GV+P+ V Y ++ CK +AR L+D+M
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P +ID C+EG +E A E+ K + + + DN + +I C++G++
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A++ E E G P TY +I G C+ + +L +M G +P V TYN+L
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ G CK G K +LE ML+ G P+ ++++L+EG ++G ++ K+
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 174/328 (53%), Gaps = 14/328 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
+++++I+ L ++R D L +++N + ++F + +GL GR ++A + F
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEEN---RIYPDVFTYSVLIHGLCKEGRLDVAEQLF 316
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF---KVVPNVFTCNILIKA 194
+++ ++ + + L++ +++R D N+ H+ V P++ N L+
Sbjct: 317 DEMQQRGLRPNGITFTALIDGQYRSRRMDSAM----NTYHQMLTMGVKPDLVMYNTLLNG 372
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LCK DV A +++DEM +GM P+ +T+TT++ GY GD+E+A + + + G V D
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+T L+ G+ + GR+ DA + + EM + G++P++ TY ++I+ +CK LL
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+M + P +++ LC++G++++A L + +L PD+ + ++ CK G
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIA 402
K + KL + E+G I Y +L++
Sbjct: 553 KAEDLLKLRN--EKGLIVDYAYYTSLVS 578
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 209/442 (47%), Gaps = 49/442 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++ + D V LL E++ C N + GL + +L L
Sbjct: 206 TYNTLLDSFLKEGRKDKVAMLLKEMETRGS-GCLPNDVTYNVVITGLTRKGDLEEAAEL- 263
Query: 140 IEKFNVQRSVRSL--NTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+E + + S N L+ L+ K YDL L +N ++P V T N +I
Sbjct: 264 VEGMRLSKKASSFTYNPLITGLLARGCVKKVYDL-QLEMENE----GIMPTVVTYNAMIH 318
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
L + VE A EM +MG++P+++T+ ++L GY G+++ A +FGD+ G P
Sbjct: 319 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 378
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TY + +DGY +LG L +A + +EM + G PN TY ++++ AR
Sbjct: 379 TVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFF 438
Query: 314 DDMLQRKYVP-----SSALCCKVI--DL----------------------------LCEE 338
D+ML + P ++ +C ++I D+ LC+
Sbjct: 439 DEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKT 498
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
G ++DA EL +++ PD + +IH C+ G + EA+K+F+ G +PS +T+
Sbjct: 499 GNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTF 558
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+I C L A + M+E+GVEPN TYN+LI C++G + EML+
Sbjct: 559 TVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLE 618
Query: 458 KGCFPNKTSFSLLIEGLYESGN 479
+G NK +++LLI+G + GN
Sbjct: 619 RGLVANKYTYTLLIDGNCKVGN 640
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 166/349 (47%), Gaps = 2/349 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G E A F + + V + N+LLN + L+F + R + + P V
Sbjct: 323 SGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR-RAGLAPTVL 381
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NI I C+ D+E A + +EM G +PN+ T+T ++ G + + A+ F ++
Sbjct: 382 TYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM 441
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L +G PD Y + + LG + A+++ + + G+ + VTY ++I CK
Sbjct: 442 LSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNL 501
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A+ L M+ P +I CE G + +A +++ ++ +P + I
Sbjct: 502 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 561
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
IH C+ G ++ A F + E G P+ +TYN LI +C A + +M+E+G+
Sbjct: 562 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGL 621
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
N +TY +LI G CK+GN ++ +R EM G P+ + L++G
Sbjct: 622 VANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 170/359 (47%), Gaps = 3/359 (0%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDD 200
+ ++ S+ + NTLL++ ++ R D V ++ K + +PN T N++I L +K D
Sbjct: 197 QLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGD 256
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +++ M + + T+ ++ G + RG ++ + ++ + G +P TY
Sbjct: 257 LEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNA 315
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++ G ++ G + A EM G+ P+ +TY ++ +CK EA L D+ +
Sbjct: 316 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 375
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P+ ID C G +E+A L + + + C+P+ + ++ + A+
Sbjct: 376 LAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAR 435
Query: 381 KLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ FDE +G P YNT I ++ A L + ++ +G+ + TYN+LI G
Sbjct: 436 EFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGL 495
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK GN K+ + +M+ G P+ +++ LI E G E K+ + + G + S
Sbjct: 496 CKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 554
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 39/296 (13%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P+V CN +++AL + V +EM +G+ P++VT+ T+L ++ G +
Sbjct: 165 VAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVA 224
Query: 241 RVFGDILDR--GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+ ++ R G +P+ TY V++ G + G L +A ++++ M
Sbjct: 225 MLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR---------------- 268
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K S L+ +L R V KV DL E + + MP
Sbjct: 269 -LSKKASSFTYNPLITGLLARGCVK------KVYDLQLE-------------MENEGIMP 308
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +IH L + G + A+ F E G +P ++TYN+L+ G C++ L EA L+
Sbjct: 309 TVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 368
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+ G+ P V TYN+ I G+C++G+ +E + EEM ++GC PN ++++L++G
Sbjct: 369 GDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKG 424
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P + N ++ + ++A + + ++M++ G+EP++ TYN L+ F K G +
Sbjct: 163 HGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDK 222
Query: 448 GIRILEEMLDK--GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
+L+EM + GC PN +++++I GL G+ E ++V S S ++N L+
Sbjct: 223 VAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLI 282
Query: 506 TRIVS 510
T +++
Sbjct: 283 TGLLA 287
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 222/452 (49%), Gaps = 18/452 (3%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
D+A + F +AGK N+ H + Y S+I L+ + FD V + E K+ +
Sbjct: 136 DIAFRFFWWAGK-QKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKE-------KGFL 187
Query: 118 ITV------IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
+TV IR++G G E + + R+++ ++ S+ + N LLN LV + + +
Sbjct: 188 MTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERV 247
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F+ K+ P+V + N +IK CK + + A+ +M + P+ +T+ T++
Sbjct: 248 FEVMECG-KIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACY 306
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G+ ++ ++ ++ +RG Y++++ G K GR + V + M G + N
Sbjct: 307 SEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVA 366
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y +I+A+ K EA NL + M + P +++ LC+ G++++A E ++
Sbjct: 367 IYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFE-F 425
Query: 352 LRKNCMPDNAI-SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
+ N + NA+ S++I L K G++ EA+K F+E ERG YN LI + +S +
Sbjct: 426 CKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGK 485
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ EA L+ M ++G + V+TY +LI G K +E +++ + M+DKG P SF
Sbjct: 486 MEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRA 545
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
L GL SG K++ G + ++
Sbjct: 546 LSVGLCLSGKVARACKILDELAPMGVIPETAF 577
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 164/378 (43%), Gaps = 40/378 (10%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRH 177
T+I+ Y AG + A++ F +EK N++ + TL+ A +D +HL +
Sbjct: 265 TMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEER 324
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
++ P+ ++ ++I LCK V + M G N+ +T ++ Y G++
Sbjct: 325 GLEIPPHAYS--LVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVN 382
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A +F + G+ PD TY V+++G K GRL +AV+ + +DN V N + Y +I
Sbjct: 383 EAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLI 442
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK-VIDLLCEEGKVED------------- 343
+ K + EA ++M++R P + C +ID L + GK+E+
Sbjct: 443 DGLGKAGRVDEAEKFFEEMVERG-CPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGC 501
Query: 344 ----------------------ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
A +LW ++ K P A + LC GK+ A K
Sbjct: 502 DQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACK 561
Query: 382 LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ DE + + +I +C++ +A +L D +V++G E +LI K
Sbjct: 562 ILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRK 621
Query: 442 IGNAKEGIRILEEMLDKG 459
GNA ++++ + G
Sbjct: 622 AGNADLAMKLMHSKIGIG 639
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 181/419 (43%), Gaps = 46/419 (10%)
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNKRYDLV 168
IK N V+++ + G+P++A + F K N + +L++ L + +D V
Sbjct: 115 IKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRV 174
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+F + K + VF N LI++ GA +GMV L+
Sbjct: 175 RCIFGEFKEK-GFLMTVFAANSLIRSF-------GA---------LGMVEELL------- 210
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
+VWR + + G P T+ L++G + + A +V + ME + P
Sbjct: 211 -WVWR-----------RMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGP 258
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V+Y MI+ +CK + +A DM +R P +I EG + L+
Sbjct: 259 DVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLY 318
Query: 349 KRLLRKNC-MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCE 406
+ + + +P +A S +I LCK+G+ E +F+ ++G ++ Y LI +
Sbjct: 319 QEMEERGLEIPPHAY-SLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGK 377
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ + EA L++ M +G EP+ TY +++ G CK G E + E D N
Sbjct: 378 NGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMF 437
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSGAGALDELLV 524
+S LI+GL ++G E K G +S +N L+ D + +G ++E LV
Sbjct: 438 YSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALI-----DALAKSGKMEEALV 491
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 212/474 (44%), Gaps = 42/474 (8%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P ++ + N+ L+L+ F + P F + + + + L A+A +S L
Sbjct: 126 PSFFSELLKQLNNVFLSLRFFLWLSS-QPEFLPHPVSCNKLFDALLEAKACVPAKSFLYS 184
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ +PE EN IR G E AV TF +++ + V + N + ++
Sbjct: 185 FEFSPEPASLEN----YIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFG 240
Query: 164 RYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP---- 218
R DL+ +++ + ++ T LI+A C + V A +L + G+ P
Sbjct: 241 RTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDA 300
Query: 219 -------------------------------NLVTHTTILGGYVWRGDIENAKRVFGDIL 247
++ T+ I+ G+ A VF +
Sbjct: 301 FNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALK 360
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
DRG+ PD YT L+ G+ K+G+L DA K+ EM D G PNE +Y +I FCK
Sbjct: 361 DRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLD 420
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L ML Y ++ C +I LC G+ ++A + ++ + KN + D +T+I
Sbjct: 421 EAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLI 480
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
C+EGK+ ++ L E + +G PS +Y LI +C+ + EA +W+DM +G++
Sbjct: 481 QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQ 540
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
P V T + +I G C+ G EG+ L ML P K +F LI+ L + G E
Sbjct: 541 PMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKE 594
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 143/307 (46%), Gaps = 6/307 (1%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ +P+ +CN L AL + + + + S P + + G +E A
Sbjct: 154 EFLPHPVSCNKLFDALL---EAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEA 210
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE--VTYGVMI 297
F + + G+ P T+ +K GR K+ + M + GV+ + T G +I
Sbjct: 211 VYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLI 270
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+AFC K A +L L+ P + K+I C+E EL ++ KN
Sbjct: 271 QAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRN 330
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD II+ CK +A ++F+ +RG P ++ Y TLI G C+ +L +A +L
Sbjct: 331 PDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKL 390
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
W +M++KG PN ++YN LI GFCKIGN E +++ ++MLD G S + LI GL
Sbjct: 391 WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 450
Query: 477 SGNEGEV 483
G E
Sbjct: 451 HGRTDEA 457
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 168/374 (44%), Gaps = 42/374 (11%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S N L +AL++ K + K+ + F+ P + I+ +C+ VE A+ D
Sbjct: 161 SCNKLFDALLEAK----ACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDM 216
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV--LMDGYIKL 268
+ G P + T + G + +++ +++ G D TV L+ +
Sbjct: 217 LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCND 276
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+++ A +++ + ++G+ P + +I FCK K L+ M+ + P
Sbjct: 277 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTY 336
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL-FDEFE 387
++I+ C+ A E++ L + PD + +T+IH CK G++ +A KL F+ +
Sbjct: 337 QEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMID 396
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP-------------------- 427
+G +P+ +YNTLI G C+ L EA +L+ M++ G +
Sbjct: 397 KGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDE 456
Query: 428 ---------------NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+V TYN LIQGFC+ G + +L+E+ KG P+ +S++ LI+
Sbjct: 457 AYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQ 516
Query: 473 GLYESGNEGEVGKV 486
L + G+ E ++
Sbjct: 517 KLCQLGSVQEAKEM 530
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 217/457 (47%), Gaps = 47/457 (10%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E+L++
Sbjct: 28 ALQFFRWVZRSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LQWDEDLWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG AG + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 86 MIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T NI+I VE A R ++M S + P+++T+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P T+T L+ GY+ + R+ DA+++++EM+ G++PN +TY +
Sbjct: 205 EKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR----- 353
C +K EAR+ L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 265 LCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPT 324
Query: 354 -------------KNCMPDNAIS-------------------------STIIHWLCKEGK 375
K D AIS + +I +LC G+
Sbjct: 325 EAGHYGVLIENYCKAVQYDKAISLLDKLIEKDIILRPQSTSHMEPSAYNPLIEYLCNNGQ 384
Query: 376 IWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A+ L + + + NTLI G + A L M+ + + YN L
Sbjct: 385 TAKAETLVRQLMKLGVQDATALNTLIRGHSQEGSPDSAFELLKIMLRRKXDSEKSAYNSL 444
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+Q + K + L+ M++ G P+ + F L++E
Sbjct: 445 VQCYLKKSEPADAKTALDSMIENGHLPDSSLFRLVME 481
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 186/359 (51%), Gaps = 3/359 (0%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
++LF++ I + + LA ++ E V S N L+ LV D+ +F
Sbjct: 730 DDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 789
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ + P+ FT ++++ A+ K +E +++ +EM + G VT+ TI+ G V
Sbjct: 790 SEMK-RLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVK 848
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ A ++ ++ G+ P TY L+DG +K G + DA + DEM + G EPN
Sbjct: 849 SKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAI 908
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +++ + + + L + M+++ P VID LC +G++ D +K+L
Sbjct: 909 YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELT 411
PD + +IH L K G++ EA L+++ E +G P+L TYN+LI + ++ +
Sbjct: 969 DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAA 1028
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EAG+++++++ KG +PNVFTYN LI+G+ G+ + M+ GC PN +++ L
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 206/438 (47%), Gaps = 42/438 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+Y+++++ L + D + ++K+ P+ + + +R+ GL V+ +
Sbjct: 628 SYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRS-GLMKEALHTVREY 686
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ V RS S+++L+ +++ + +N ++ ++F I I+ LCK
Sbjct: 687 ILQPDSKVDRS--SVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPI-IRHLCK 743
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A ++ + ++G+ ++ ++ G V I+ A+ +F ++ G PD T
Sbjct: 744 HKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFT 803
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +++D K R+ D +K+ +EM + G + VTY +I K K EA NL ++
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLM 863
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDA--------------------------------- 344
+ P+ ++D L ++G +EDA
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 345 --CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
CEL++ ++ + PD + +I LC +G++ + F + + G P L+TYN LI
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ +S L EA L++DM +KG+ PN++TYN LI K G A E ++ EE+L KG
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWK 1043
Query: 462 PNKTSFSLLIEGLYESGN 479
PN +++ LI G SG+
Sbjct: 1044 PNVFTYNALIRGYSVSGS 1061
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 168/363 (46%), Gaps = 3/363 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+IT++ G +G + + ++ +V S ++AL Q R D +F +
Sbjct: 314 YITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMK 373
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K ++P ++ N LI K D A+ + + M G PN TH + + G+
Sbjct: 374 QK-GIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A + + + +G VPD ++ G K GRL A +V E++ G+ P+ +TY +M
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ K + EA + +M++ + P +ID+L + G+ +A +++ L N
Sbjct: 493 IKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL 552
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
P + +T++ L +EGK+ E +L + S P+++TYNT++ +C++ E+ A
Sbjct: 553 EPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALD 612
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ M G P++ +YN ++ G K E + +M K P+ + ++
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFV 671
Query: 476 ESG 478
SG
Sbjct: 672 RSG 674
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 190/418 (45%), Gaps = 14/418 (3%)
Query: 77 NYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N TY+ +I+ L ++ A D +++ + P ++ + ++ +G E
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAAD-GVVPTVRT----YSVLMLAFGKRRDAET 224
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
V +E V+ +V S + L Q R + + + + + P+V T +LI
Sbjct: 225 VVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEE-GCKPDVVTNTVLI 283
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ LC + A V +M + P+ VT+ T+L GD + ++ + G+
Sbjct: 284 QILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYN 343
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
+ +YT +D ++GR+ +A+ V DEM+ G+ P + +Y +I F K + A L
Sbjct: 344 DNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALEL 403
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M P+ I+ + G+ A + ++ + K +PD + +++ L K
Sbjct: 404 FNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAK 463
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ AK++F E + G P +TY +I +++ EA +++ +M+E P+V
Sbjct: 464 TGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLA 523
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
N LI K G E +I E+ + P +++ L+ GL G EG+V +V+ +
Sbjct: 524 MNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL---GREGKVKEVMQL 578
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F + + +VV +CN +++ + V +V D M + N+ T T+ G
Sbjct: 87 LFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAV 146
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G + +A + + G V +A TY L+ +K G +A+ V M +GV P
Sbjct: 147 GVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTV 206
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
TY V++ AF K + + LL +M R P+ I +L + G++E+A + ++
Sbjct: 207 RTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRK 266
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAE 409
+ + C PD ++ +I LC G++ +AK +F + + P +TY TL+ +S +
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+W+ + G NV +Y + C++G E + + +EM KG P + S++
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386
Query: 470 LIEGLYES 477
LI G ++
Sbjct: 387 LISGFLKA 394
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 13/377 (3%)
Query: 127 AGRPELAVKTFLRIEKF-NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
A PE A++ FL + + V + S N +L + + R V +F + + + NV
Sbjct: 78 AADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQI-IKANV 136
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T + A+ + + A L M G+V N T+ ++ V G A V+
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKA 196
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ G VP TY+VLM + K V ++ EME GV PN +Y + I + +
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA +L M + P +I +LC+ G++ DA +++ ++ + PD T
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316
Query: 366 IIHWLCKEG------KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++ G +IW A K G ++++Y + +C+ + EA ++D+
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALK-----ADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +KG+ P ++YN LI GF K + + M G PN + L I +SG
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 480 EGEVGKVVSMATASGSV 496
+ K + + G V
Sbjct: 432 SLKALKRYELMKSKGIV 448
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 158/333 (47%), Gaps = 2/333 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VP+V N ++ L K + A RV E+ +MG+ P+ +T+T ++ + + A
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F ++++ PD L+D K GR +A K+ E+++ +EP + TY ++
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL 566
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K E LL+ M + P+ V+D LC+ G+V A ++ + CMPD
Sbjct: 567 GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDL 626
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA-GRLWDD 419
+ +T+++ L KE ++ EA +F + ++ P T T++ S + EA + +
Sbjct: 627 SSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREY 686
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+++ + + + + L++G K ++ I E + G + S +I L +
Sbjct: 687 ILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKE 746
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIVSD 511
++V G S+++ S+N L+ +V +
Sbjct: 747 ALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 1/204 (0%)
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q + V ++ C +++L+ G+V D +++ + R+ + T+ + EG +
Sbjct: 94 QPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLR 153
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A E G + + TYN LI + +S EA ++ M GV P V TY++L+
Sbjct: 154 SAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLM 213
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
F K +A+ + +L EM +G PN S+++ I L ++G E +++ G
Sbjct: 214 LAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCK 273
Query: 497 ESDSWNFLLTRIVSDLDSGAGALD 520
N +L +I+ D A A D
Sbjct: 274 PDVVTNTVLIQILCDAGRLADAKD 297
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 156/296 (52%), Gaps = 1/296 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T N L+ C + + A+ ++D+M MG P+ VT TT++ G A +
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ RG PD TY +++G K G A+ ++++ME +E N V Y +I++ CK
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A NL +M + P+ +I LC G+ DA L ++ + P+
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I K+GK+ +A+KL++E + SI P++ TY++LI G C L EA ++ + M+
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
K PNV TYN LI GFCK +G+ + EM +G N +++ LI G +++
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 240/468 (51%), Gaps = 16/468 (3%)
Query: 31 VTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHP-NFSHNYDTYHSIIHKLA 89
V +P+P + +L+S I + DL + + K SHN TY+ +I+
Sbjct: 68 VMAQSRPFPSIIEFSKLLSAIAKMNKFDL---VISFGEKMEILGISHNLYTYNILINCFC 124
Query: 90 RARAFDAVESL---LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQ 146
R +L + +L P+I +L + + R AV ++ + +
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSL----LNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 147 RSVRSLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ TL++ L + NK + V L+ + + + P++ T ++ LCK+ D + A+
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ--PDLVTYGAVVNGLCKRGDTDLAL 238
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+L++M + + N+V ++T++ ++A +F ++ ++G P+ TY+ L+
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
GR +DA +++ +M + + PN VT+ +I+AF K K +A L ++M++R P+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+I+ C ++ +A ++ + ++RK+C+P+ +T+I+ CK ++ + +LF E
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+RG + + +TY TLI G ++ + A ++ MV GV PN+ TYN+L+ G CK G
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+ + + E + P+ +++++IEG+ ++G + ++G + +A+A
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG-KWKMGGIYFVASA 525
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 123/280 (43%), Gaps = 36/280 (12%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++++A +FG + P ++ L+ K+ + + ++ME G+ N TY
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 295 VMIEAFCK-----------------------------------GKKSGEARNLLDDMLQR 319
++I FC+ G + +A L+D M++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
Y P + +I L K +A L R++++ C PD +++ LCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 380 KKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L ++ E I + ++ Y+T+I +C+ +A L+ +M KGV PNV TY+ LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
C G + R+L +M+++ PN +FS LI+ + G
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYN 398
+++DA L+ + + P S ++ + K K ++ E G +L TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
LI C + L+ A L M++ G EP++ T N L+ GFC + + ++++M++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P+ +F+ LI GL+ E ++ G
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 220/482 (45%), Gaps = 5/482 (1%)
Query: 39 PQRLYPKRLVSMI-FRQQNLDLALQIFHYAGKFHPNFSHNY-DTYHSIIHKLARARAFDA 96
P L P L+S + L I Y H +H S++ + + ++
Sbjct: 78 PHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNS 137
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
S+ T + + +F ++ Y +G A++ F + K N+Q S L
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L++ F P+V N+L+ LCK+ + A + E+ G+
Sbjct: 198 DRLMKLNLTSPA-WAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P +V+ T++ GY G+++ R+ +++ PD TY+VL++G K G+L DA K
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ EM D G+ PN+VT+ +I C ++ + ML++ P +I+ LC
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLL 395
+ G + +A +L + ++ PD + +I CKEG + A ++ E + I +
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+ LI+G C ++ EA R +M+E G++P+ TY M+I GFCK G+ K G ++L+EM
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIVSDLDS 514
G P ++++L+ GL + G ++ G V D ++N LL R +
Sbjct: 497 QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWKQ 556
Query: 515 GA 516
G
Sbjct: 557 GG 558
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 243/510 (47%), Gaps = 14/510 (2%)
Query: 20 GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLA--LQIFHYAGKFHPNFSHN 77
G R + + + + P R L+ + R ++L L+ F P+
Sbjct: 189 GSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVY-- 246
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
TY + + +AR FDA + + E+++ + E + +I +G E A
Sbjct: 247 --TYSTFLEAHCKARDFDAAKKVFEEMRRR-DCAMNEVTYNVMISGLCRSGAVEEAFGFK 303
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + + L+N L + R + L+ + S K PNV L+
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLK--PNVVVYATLVDGFM 361
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A +L+EM S G+ PN + + ++ G G + A ++ +++ G PD
Sbjct: 362 KEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTF 421
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY LM G+ + A ++++EM ++G+ PN TYG+MI C+ +S EA NLL++M
Sbjct: 422 TYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEM 481
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P++ + +I +EG + ACE + + + N +PD +++I L G+I
Sbjct: 482 ISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRI 541
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA++ + + + RG +P TY+ LI G C++ L +A +L M+ G++PN TY L
Sbjct: 542 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDL 601
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
++G+ K + ++ IL+ ML G P+ + ++I L S N V++ +G
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661
Query: 496 V-ESDSWNFLLTRI--VSDLDSGAGALDEL 522
V + ++ L++ + ++D++ G LDE+
Sbjct: 662 VPDLHIYSSLISGLCKMADMEKAVGLLDEM 691
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 203/437 (46%), Gaps = 6/437 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I+ L + +LL E+ +K ++ +I + G LA ++
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGHISLACES 512
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ K NV + N+L+ L R + + + K +VP+ FT + LI C
Sbjct: 513 LENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYC 571
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++E A ++L +M + G+ PN T+T +L GY D E + +L G PD
Sbjct: 572 KTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNH 631
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y +++ + + A V+ E+E NG+ P+ Y +I CK +A LLD+M
Sbjct: 632 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEM 691
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P +ID C G + A ++ +L K +P+ + +I CK G I
Sbjct: 692 AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDI 751
Query: 377 WEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A L+ D +RG P YN L G ++A+L +A L ++M +G +V ++ L
Sbjct: 752 TDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTL 810
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
++GFCK G +E ++L M+D+ PN + +I ++G E +V + +
Sbjct: 811 VRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKA 870
Query: 496 VES--DSWNFLLTRIVS 510
+S D ++ L T +++
Sbjct: 871 SQSSTDRFSLLFTDMIN 887
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 1/248 (0%)
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
Y G + A +V + D G P L+ ++ + K+ ME G+ P+
Sbjct: 185 YKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPD 244
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
TY +EA CK + A+ + ++M +R + +I LC G VE+A +
Sbjct: 245 VYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 304
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESA 408
++ PD +++ LCK G++ EAK L DE G P+++ Y TL+ G +
Sbjct: 305 EMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEG 364
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ EA + ++M+ GV+PN Y+ LI+G CKIG ++L EM+ G P+ ++
Sbjct: 365 KAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYH 424
Query: 469 LLIEGLYE 476
L++G ++
Sbjct: 425 PLMQGHFQ 432
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 177/372 (47%), Gaps = 3/372 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG + A + +F + N L+N+ + R +F+ P+V+
Sbjct: 170 AGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVW 229
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ N+ IK +C+ DV+ A+ +++ M G P+ VT+ ++GG ++ + V +
Sbjct: 230 SFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRL 289
Query: 247 LDRG-WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
G +P+ TYT ++ GY K GR+ DA+ V ++M G PN VTY V+I + K
Sbjct: 290 QRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGN 349
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
G A + M+ R+ P +ID C G+++DA W + + P+ S
Sbjct: 350 MGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSI 409
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
II CK+ + EA + E R I P N +I +C+ ++ EA + +M K
Sbjct: 410 IILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGK 469
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G P+ +TY +LI G C G E I +M+D GC P+ + + I L ++G EV
Sbjct: 470 GCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEV 529
Query: 484 GKVVSMATASGS 495
+++ +A+ S S
Sbjct: 530 DRIMKIASGSTS 541
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 152/302 (50%), Gaps = 2/302 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F I+ G + A++ R+ +F + N L+ L + K + + +
Sbjct: 231 FNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQ 290
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+PNV T +I CK +E A+ V ++M G PN VT+ ++ GY G++
Sbjct: 291 RDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNM 350
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A V+ ++ R PD T++ L+DGY + G+L DA++ EM ++PN T+ ++
Sbjct: 351 GSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSII 410
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I +FCK +S EA L ++ R + P + +C VID+LC+ GKV++A + + K
Sbjct: 411 ILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKG 470
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
C PD + +I C +G+I EA F++ + G P +T N+ I + ++ +E
Sbjct: 471 CRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVD 530
Query: 415 RL 416
R+
Sbjct: 531 RI 532
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 39/306 (12%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM-GMVPNLVTHTTILGGYVWRGDI 236
+ + P+ + +I LC+ A+++ D+M G PN + + G G +
Sbjct: 114 QLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFL 173
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE-MEDNGVEPNEVTYGV 295
+ A + G +A Y LM+ +I GR+ DAV + + ++ P+ ++ V
Sbjct: 174 DAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNV 233
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I+ +C+ G V+ A EL +R+
Sbjct: 234 AIKG-----------------------------------VCQVGDVQKALELVERMAEFG 258
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEA 413
C PD ++ ++ LC+ ++ +++ +R + P+++TY ++I+G C+S + +A
Sbjct: 259 CSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDA 318
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+++DM+ G PN TYN+LI G+ K GN + + ++M+ + C P+ +FS LI+G
Sbjct: 319 MAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDG 378
Query: 474 LYESGN 479
G
Sbjct: 379 YCRCGQ 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+I Y G+ + A++T+ + ++ +Q + + + ++ + + R K
Sbjct: 372 FSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELN 431
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ + P F CN +I LCK V+ A +L EM G P+ T+T ++ G+ +G I
Sbjct: 432 MRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRI 491
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
A F ++D G PD+ T + +K G ++ ++M + EV
Sbjct: 492 SEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMKIASGSTSSSQEV 546
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 229/492 (46%), Gaps = 40/492 (8%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
+ L P + +++ Q + +AL F++A + +SH+ Y++++ L++ +
Sbjct: 159 RSLKPSLVCAVLRSQADERVALNFFYWADR-QWRYSHHPLVYYTLLDVLSKTKLCQGARR 217
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
+L L I+ F V+ +Y AG+ A++ ++K V+ ++ NT + L
Sbjct: 218 VL-RLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVL 276
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+ + + L F + P++ T N LIK C + +E A+ ++ +PS G P+
Sbjct: 277 VKGCKLEKA-LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPD 335
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDIL-DRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
V++ T++G IE K + ++ D +PD TY L+ K G DA+ +
Sbjct: 336 KVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFL 395
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
E ED G ++V Y ++ +FC+ + EA++L+ DM R P ++D C
Sbjct: 396 KEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRL 455
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF--------------- 383
G++++A ++ +++ + C P+ + +++ LC GK EA+++
Sbjct: 456 GRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITY 515
Query: 384 ---------------------DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ E+G P+ + N LI +C++ ++ EA + ++ +
Sbjct: 516 GVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLN 575
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KG NV + +I GFC+IG+ + + +LE+M P+ +++ L + L + G E
Sbjct: 576 KGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDE 635
Query: 483 VGKVVSMATASG 494
+++ + G
Sbjct: 636 AAELIVKMLSKG 647
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 1/323 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S T++ L + K+ + V + + ++P+ T N LI L K + A+ L E
Sbjct: 338 SYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 397
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
G + V ++ I+ + +G ++ AK + D+ R PD TYT ++DG+ +LGR
Sbjct: 398 AEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGR 457
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A K++ +M +G +PN V+Y ++ C KS EAR +++ + + P++
Sbjct: 458 IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGV 517
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
V+ EGK+ +AC+L + ++ K P + +I LC+ K+ EAKK +E +G
Sbjct: 518 VMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKG 577
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+++ + T+I G C+ ++ A + +DM P+ TY L K G E
Sbjct: 578 CAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAA 637
Query: 450 RILEEMLDKGCFPNKTSFSLLIE 472
++ +ML KG P +F +I
Sbjct: 638 ELIVKMLSKGLDPTPVTFRSVIH 660
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 181/426 (42%), Gaps = 46/426 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P ++ L+ M+ + + D AL A F + Y +I+H + D +
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAED--KGFHIDKVGYSAIVHSFCQKGRMDEAK 427
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
SL+ ++ NP++ + ++ + GR + A K ++ K + + S L
Sbjct: 428 SLVIDMYSRSCNPDVVT----YTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTAL 483
Query: 156 LNALVQNKRYDLVHLMFKNSR---------------HKFK-------------------V 181
LN L + + M S H F+
Sbjct: 484 LNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGF 543
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P N+LI++LC+ V A + L+E + G N+V TT++ G+ GD+E A
Sbjct: 544 FPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALS 603
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
V D+ PDA TYT L D K GRL +A +++ +M G++P VT+ +I +C
Sbjct: 604 VLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYC 663
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ + + NLLD M++RK P + VI+ LC+ G +E+A +L ++LR D
Sbjct: 664 QWGRVDDMLNLLDRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDAN 721
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
++ K+G A K+ + F R P L + + L EA +L
Sbjct: 722 TCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRF 781
Query: 421 VEKGVE 426
VE+G++
Sbjct: 782 VERGIQ 787
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 192/447 (42%), Gaps = 45/447 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++++ L + + + V+ L+ ++ Q+ + + + T+I G + A+
Sbjct: 338 SYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 397
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
E + ++++ Q R D LV M+ S + P+V T ++
Sbjct: 398 AEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCN-----PDVVTYTAIVDGF 452
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ ++ A ++L +M G PN V++T +L G G A+ + + W P+A
Sbjct: 453 CRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 512
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR----- 310
TY V+M G+ + G+L++A + EM + G P V ++I++ C+ +K EA+
Sbjct: 513 ITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 572
Query: 311 ------------------------------NLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
++L+DM P + + D L ++G+
Sbjct: 573 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGR 632
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTL 400
+++A EL ++L K P ++IH C+ G++ + L D + P YN +
Sbjct: 633 LDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRK-PFRTIYNHV 691
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ L EA +L ++ + + T ++L++ K G A ++ +M +
Sbjct: 692 IEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNL 751
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVV 487
P+ + + L GN E K++
Sbjct: 752 TPDLKLCEKVTKKLVLDGNLVEADKLM 778
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 218/445 (48%), Gaps = 19/445 (4%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL-TELKQNPEIKCGENLF 117
LAL+ F++ G H N +H+ +Y ++H L +R F SLL T L + KC + F
Sbjct: 85 LALRFFNFLG-LHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHF 143
Query: 118 IT---------------VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ +++NY L+ R AV + N+ VR+L+ LLN L++
Sbjct: 144 LDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKV 203
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+++ V +F S + V P+ +TC+ +++++C+ D A + M + G ++VT
Sbjct: 204 RKFITVWELFDESVNA-GVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVT 262
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ G + A V + +G D TY L+ G+ +L + +++MDEM
Sbjct: 263 YNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMV 322
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+ G P E +++ K K +A L+ + + +VP+ + +I+ LC+ G ++
Sbjct: 323 ELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLD 382
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
A L+ + N P+ S +I C+ G++ A FD + I ++ YN+LI
Sbjct: 383 KAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLI 442
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G C+ +L+ A L+ +M KGVEP T+ LI G+CK ++ ++ +M+D G
Sbjct: 443 NGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGIT 502
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKV 486
PN +F+ LI GL + E ++
Sbjct: 503 PNVYTFTALISGLCSTNKMAEASEL 527
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 205/404 (50%), Gaps = 9/404 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +++ R + F+A L+ E+ + +P E ++ G+ + A +
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT----EAAVSGLVDGLRKQGKIDDAYEL 352
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+++ +F ++ N L+N+L + D L++ N + PN T +ILI + C
Sbjct: 353 VVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSN-MSLMNLRPNGITYSILIDSFC 411
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++ AI D M G+ + + +++ G GD+ A+ +F ++ ++G P AT
Sbjct: 412 RSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTAT 471
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+T L+ GY K ++ A K+ ++M DNG+ PN T+ +I C K EA L D++
Sbjct: 472 TFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDEL 531
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++RK P+ +I+ C +GK++ A EL + + +K +PD +I LC G++
Sbjct: 532 VERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRV 591
Query: 377 WEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+AK D+ + ++ + + Y+ L+ G C+ L EA +M+++G+ ++ + +L
Sbjct: 592 SKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVL 651
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I G K + K +L++M D+G P+ ++ +I+ + G+
Sbjct: 652 IDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 208/452 (46%), Gaps = 9/452 (1%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ R LD+A+ F Y+S+I+ + A E
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRM--IQDGIGETVYAYNSLINGQCKFGDLSAAE 455
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
SL E+ N ++ F ++I Y + + A K + ++ + +V + L++
Sbjct: 456 SLFIEM-TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L + +F + K+ P T N+LI+ C+ ++ A +L++M G+VP
Sbjct: 515 LCSTNKMAEASELFDELVER-KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ T+ ++ G G + AK D+ + + Y+ L+ GY + GRL +A+
Sbjct: 574 DTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSAS 633
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM G+ + V + V+I+ K +LL DM + P + + +ID +E
Sbjct: 634 CEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKE 693
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTY 397
G + A E W ++ + C P+ + +++ LCK G++ A LF + ++P + +TY
Sbjct: 694 GSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITY 753
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+ + + + EA L M+ KG+ N T+N++I+GFCK+G E ++L EM +
Sbjct: 754 GCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTE 812
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G FP+ ++S LI YE G VG V +
Sbjct: 813 NGIFPDCVTYSTLI---YEYCRSGNVGASVKL 841
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 202/480 (42%), Gaps = 75/480 (15%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P LV + +Q +D A ++ G+F F N Y+++I+ L + D E
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRF--GFVPNLFVYNALINSLCKGGDLDKAE 385
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
L + + ++ + +I ++ +GR ++A+ F R+ + + +V + N+L+N
Sbjct: 386 LLYSNMSL-MNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLING 444
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
CK D+ A + EM + G+ P
Sbjct: 445 Q------------------------------------CKFGDLSAAESLFIEMTNKGVEP 468
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
T T+++ GY ++ A +++ ++D G P+ T+T L+ G ++ +A ++
Sbjct: 469 TATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELF 528
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
DE+ + ++P EVTY V+IE +C+ K +A LL+DM Q+ VP + +I LC
Sbjct: 529 DELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCST 588
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA------------------- 379
G+V A + L ++N + S ++H C+EG++ EA
Sbjct: 589 GRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCH 648
Query: 380 ------------KKLF-----DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+K F D ++G P + Y ++I + +A WD MV
Sbjct: 649 AVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVT 708
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ PNV TY L+ G CK G + + M PN ++ ++ L + GN E
Sbjct: 709 EECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKE 768
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 172/388 (44%), Gaps = 4/388 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T+ ++I L L EL + +IK E + +I Y G+ + A +
Sbjct: 504 NVYTFTALISGLCSTNKMAEASELFDELVER-KIKPTEVTYNVLIEGYCRDGKIDKAFEL 562
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + + L++ L R F + HK V N + L+ C
Sbjct: 563 LEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK-DFIDDLHKQNVKLNEMCYSALLHGYC 621
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + A+ EM G+ +LV H ++ G + + D + + D+ D+G PD
Sbjct: 622 QEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
YT ++D Y K G A + D M PN VTY ++ CK + A L M
Sbjct: 682 IYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRM 741
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P+S +D L +EG +++A L +L K + + + II CK G+
Sbjct: 742 QAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRF 800
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA K+ E E G P +TY+TLI C S + + +LWD M+ +G+EP++ YN+L
Sbjct: 801 HEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLL 860
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPN 463
I G C G + + ++ML +G P+
Sbjct: 861 IYGCCVNGELDKAFELRDDMLRRGIIPD 888
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T L+ LCK +++ A + M + + PN +T+ L G+++ A +
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL 772
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L +G + + T+ +++ G+ KLGR +A KV+ EM +NG+ P+ VTY +I +C+
Sbjct: 773 HHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCR 831
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
G + L D ML R P +I C G+++ A EL +LR+ +PDN
Sbjct: 832 SGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK- 890
Query: 363 SSTIIHWLCKEGKIWEA 379
+L K+G I+EA
Sbjct: 891 ------YLQKKGTIFEA 901
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 43/292 (14%)
Query: 240 KRVFGDILD---RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
K VF LD R + +L+ Y+ R+ DAV ++ M N + P T +
Sbjct: 137 KCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSAL 196
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ K +K L D+ + P C V+ +CE K LR
Sbjct: 197 LNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCE----------LKDFLRA-- 244
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
KE W FD S++TYN LI G+C+ ++EA +
Sbjct: 245 ---------------KEKIRWMEANGFD-------LSIVTYNVLIHGLCKGDRVSEAVEV 282
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ KG+ +V TY L+ GFC++ + GI++++EM++ G P + + S L++GL +
Sbjct: 283 KRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRK 342
Query: 477 SGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALD--ELLVKN 526
G + ++V G V + F+ +++ L G G LD ELL N
Sbjct: 343 QGKIDDAYELVVKVGRFGFVPN---LFVYNALINSLCKG-GDLDKAELLYSN 390
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 217/420 (51%), Gaps = 20/420 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F HN +T+ II L RA + +L ++ + ++ E++++ +I +YG G + +
Sbjct: 33 FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVMMIDSYGKEGIVQES 91
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
VK F ++E+ V+R+++S N L +++ RY + F N + P T N++I
Sbjct: 92 VKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYF-NKMLSEGIEPTRHTFNVMIW 150
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
VE AIR ++M S + P++VT+ T++ GY +E A++ F ++ R P
Sbjct: 151 GFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEP 210
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
TYT L+ GY+ + ++ DA+++++EM+ G +PN +TY ++ C +K EAR +L
Sbjct: 211 TVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVIL 270
Query: 314 DDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P+ +++ ++I C+ G ++ A ++ K ++R + + +I CK
Sbjct: 271 KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCK 330
Query: 373 EGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
G+ +A KL D+ I PS +N +I +C + + ++A L ++
Sbjct: 331 AGQYDKAVKLLDKLIEKDIMLRPQSTLHLEPS--AHNPMIEYLCNNGQASKAETLVRQLM 388
Query: 422 EKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ GV+ P N LI+G + G+ +L+ ML + K++++ L++ Y NE
Sbjct: 389 KLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQS-YLKKNE 445
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 44/282 (15%)
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
N E N T+ +IE + K AR +L DM ++ + +ID +EG V++
Sbjct: 31 NLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQE 90
Query: 344 ACELWKRL-------------------LRK----------NCMPDNAISST-----IIHW 369
+ ++++++ LR+ N M I T ++ W
Sbjct: 91 SVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIW 150
Query: 370 -LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
GK+ A + F++ + I P ++TYNT+I G ++ EA + + +M + +EP
Sbjct: 151 GFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEP 210
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
V TY LI+G+ + + +R++EEM G PN ++S L+ GL + E ++
Sbjct: 211 TVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVIL 270
Query: 488 SMATASGSVESDSWNFLLTRIVS------DLDSGAGALDELL 523
+D N + R++S +LD+ A L ++
Sbjct: 271 KEMMDKYLAPTD--NSIFMRLISSHCKSGNLDAAADVLKAMI 310
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 221/434 (50%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G + A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNPDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLXKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 10/347 (2%)
Query: 153 NTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALC---KKDDVEGAIRVL 208
N +LNA+ + D V L+ K + F ++ + N ++K LC + DVE ++
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAF--FGCEADIVSYNAVLKGLCMAKRWGDVE---ELM 239
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DEM + PN+VT T++G G E V + + G PD Y ++DG K
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G L A ++++ M G++PN V Y +++ C ++ EA LL +M Q+
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
++D C+ G V+ EL +++L CMPD +T+I+ CKEG I EA L
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P+ ++Y ++ G+C + +A L M+++G PN T+N LI CK G ++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
I +L++ML GC P+ S+S +I+GL ++G E +++++ G
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 194/387 (50%), Gaps = 9/387 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T++++I L R F+ V +L ++ ++ P+I+ ++ T+I G E+A
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR----MYATIIDGICKEGHLEVA 305
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R+ + ++ +V NT+L L +R+ + K + +V T NIL+
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVD 364
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ V+ I +L++M S G +P+++T+TT++ G+ G I+ A + + G P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ +YT+++ G GR DA ++M +M G PN VT+ +I CK +A LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
ML P VID L + GK E+A EL ++ K P+ I S+I L +E
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 374 GKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ + ++FD + +I S + YN +I+ +C+ E A + MV G PN TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKG 459
MLI+G G AKE +L E+ +G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 206/420 (49%), Gaps = 7/420 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
+Y++++ L A+ + VE L+ E+ + + C N+ F T+I G E +
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR---VDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + +R T+++ + + ++ + + N + + PNV N ++K LC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL-NRMPSYGLKPNVVCYNTVLKGLCS 333
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A +L EM + VT ++ + G ++ + +L G +PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT +++G+ K G + +AV ++ M G +PN V+Y ++++ C + +A L+ M+
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q+ P+ +I+ LC++G VE A EL K++L C PD ST+I L K GK
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA +L + +G P+ + Y+++ + + + +++D++ + + + YN +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK I M+ GC PN++++++LI+GL G E +++S + G++
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 190/413 (46%), Gaps = 12/413 (2%)
Query: 81 YHSIIHKLARARAF-DAVESLLTELKQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFL 138
YH I+ R+ F ++V L + + G NL + I G AV
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE---AVGLLR 205
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ F + + S N +L L KR+ D+ LM + R PN+ T N LI LC+
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR--VDCAPNIVTFNTLIGYLCR 263
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
E VL +M G P++ + TI+ G G +E A + + G P+
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++ G R +A +++ EM ++VT+ ++++ FC+ LL+ ML
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+P VI+ C+EG +++A L K + C P+ + ++ LC G+
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A++L + ++G P+ +T+NTLI +C+ + +A L M+ G P++ +Y+ +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G K G +E + +L M++KG PN +S + L EG V KV+ M
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL---SREGRVNKVIQM 553
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 2/332 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T +++ LC + + A+ VLDEM G P + IL G N+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RV + +G D ++++ + G + +AV ++ ++ G E + V+Y +++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ G+ L+D+M++ P+ +I LC G E E+ ++ C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CKEG + A ++ + G P+++ YNT++ G+C + EA L +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + T+N+L+ FC+ G I +LE+ML GC P+ +++ +I G + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVS 510
E ++ SM++ + S+ +L + S
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 149/357 (41%), Gaps = 45/357 (12%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
R+Y ++ I ++ +L++A +I + + N Y++++ L A + E L
Sbjct: 287 RMY-ATIIDGICKEGHLEVANEILNRMPSY--GLKPNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 101 LTELKQNP------------EIKCGENL----------------------FITVIRNYGL 126
L+E+ Q + C L + TVI +
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNV 185
G + AV + + + S +L L R+ D LM + + PN
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP--PNP 461
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N LI LCKK VE AI +L +M G P+L++++T++ G G E A +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++++G P+ Y+ + + GR+ +++ D ++D + + V Y +I + CK +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL-----LRKNCM 357
+ A + M+ +P+ + +I L EG ++A EL L LRK+ M
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLM 638
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 291 VTYGVMIEAFCKGKKS--------------------------------GEARNLLDDMLQ 318
V Y M+ +C+ + +A +LD+M
Sbjct: 80 VAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF 139
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P + +++ C G ++ + + + K C D + +++ +C++G + E
Sbjct: 140 KGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE 199
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L + G +++YN ++ G+C + + L D+MV PN+ T+N LI
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
C+ G + +L +M + GC P+ ++ +I+G+ + G+
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ YN ++AG C + +L A RL + V PN +T+ +++G C G + + +L+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD- 511
EM KGC P + +++E SG +V+ A G ++++ + N +L I
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 512 -LDSGAGALDELLVKNC 527
+D G L +L C
Sbjct: 196 CVDEAVGLLRKLAFFGC 212
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 10/347 (2%)
Query: 153 NTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALC---KKDDVEGAIRVL 208
N +LNA+ + D V L+ K + F ++ + N ++K LC + DVE ++
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAF--FGCEADIVSYNAVLKGLCMAKRWGDVE---ELM 239
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DEM + PN+VT T++G G E V + + G PD Y ++DG K
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G L A ++++ M G++PN V Y +++ C ++ EA LL +M Q+
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
++D C+ G V+ EL +++L CMPD +T+I+ CKEG I EA L
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P+ ++Y ++ G+C + +A L M+++G PN T+N LI CK G ++
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
I +L++ML GC P+ S+S +I+GL ++G E +++++ G
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 194/387 (50%), Gaps = 9/387 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T++++I L R F+ V +L ++ ++ P+I+ ++ T+I G E+A
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR----MYATIIDGICKEGHLEVA 305
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R+ + ++ +V NT+L L +R+ + K + +V T NIL+
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVD 364
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ V+ I +L++M S G +P+++T+TT++ G+ G I+ A + + G P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ +YT+++ G GR DA ++M +M G PN VT+ +I CK +A LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
ML P VID L + GK E+A EL ++ K P+ I S+I L +E
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544
Query: 374 GKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ + ++FD + +I S + YN +I+ +C+ E A + MV G PN TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKG 459
MLI+G G AKE +L E+ +G
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 206/420 (49%), Gaps = 7/420 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
+Y++++ L A+ + VE L+ E+ + + C N+ F T+I G E +
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVR---VDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + +R T+++ + + ++ + + N + + PNV N ++K LC
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL-NRMPSYGLKPNVVCYNTVLKGLCS 333
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ + A +L EM + VT ++ + G ++ + +L G +PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT +++G+ K G + +AV ++ M G +PN V+Y ++++ C + +A L+ M+
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q+ P+ +I+ LC++G VE A EL K++L C PD ST+I L K GK
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA +L + +G P+ + Y+++ + + + +++D++ + + + YN +I
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
CK I M+ GC PN++++++LI+GL G E +++S + G++
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 190/413 (46%), Gaps = 12/413 (2%)
Query: 81 YHSIIHKLARARAF-DAVESLLTELKQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFL 138
YH I+ R+ F ++V L + + G NL + I G AV
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE---AVGLLR 205
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ F + + S N +L L KR+ D+ LM + R PN+ T N LI LC+
Sbjct: 206 KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR--VDCAPNIVTFNTLIGYLCR 263
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
E VL +M G P++ + TI+ G G +E A + + G P+
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++ G R +A +++ EM ++VT+ ++++ FC+ LL+ ML
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+P VI+ C+EG +++A L K + C P+ + ++ LC G+
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A++L + ++G P+ +T+NTLI +C+ + +A L M+ G P++ +Y+ +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G K G +E + +L M++KG PN +S + L EG V KV+ M
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL---SREGRVNKVIQM 553
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 2/332 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T +++ LC + + A+ VLDEM G P + IL G N+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
RV + +G D ++++ + G + +AV ++ ++ G E + V+Y +++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ G+ L+D+M++ P+ +I LC G E E+ ++ C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CKEG + A ++ + G P+++ YNT++ G+C + EA L +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +K + T+N+L+ FC+ G I +LE+ML GC P+ +++ +I G + G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVS 510
E ++ SM++ + S+ +L + S
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 149/357 (41%), Gaps = 45/357 (12%)
Query: 41 RLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
R+Y ++ I ++ +L++A +I + + N Y++++ L A + E L
Sbjct: 287 RMY-ATIIDGICKEGHLEVANEILNRMPSY--GLKPNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 101 LTELKQNP------------EIKCGENL----------------------FITVIRNYGL 126
L+E+ Q + C L + TVI +
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNV 185
G + AV + + + S +L L R+ D LM + + PN
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP--PNP 461
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N LI LCKK VE AI +L +M G P+L++++T++ G G E A +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++++G P+ Y+ + + GR+ +++ D ++D + + V Y +I + CK +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL-----LRKNCM 357
+ A + M+ +P+ + +I L EG ++A EL L LRK+ M
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLM 638
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 291 VTYGVMIEAFCKGKKS--------------------------------GEARNLLDDMLQ 318
V Y M+ +C+ + +A +LD+M
Sbjct: 80 VAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF 139
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P + +++ C G ++ + + + K C D + +++ +C++G + E
Sbjct: 140 KGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDE 199
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L + G +++YN ++ G+C + + L D+MV PN+ T+N LI
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
C+ G + +L +M + GC P+ ++ +I+G+ + G+
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++ YN ++AG C + +L A RL + V PN +T+ +++G C G + + +L+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD- 511
EM KGC P + +++E SG +V+ A G ++++ + N +L I
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 512 -LDSGAGALDELLVKNC 527
+D G L +L C
Sbjct: 196 CVDEAVGLLRKLAFFGC 212
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 196/385 (50%), Gaps = 9/385 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLM 171
F ++R R A+ LR + + V S TLL L K+ +L+H+M
Sbjct: 182 FTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMM 241
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
++ + PNV + +I K+ DV A + +M G+ PN+VT +++ G
Sbjct: 242 AEDGDN---CPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLC 298
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
++ A+ V ++D +P+ TTY L+ GY+ G+ T+AV+++ EM +G PN V
Sbjct: 299 KVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVV 358
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++I+ CK EAR + + M+Q P+++ ++ EG + D + +
Sbjct: 359 TYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM 418
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAEL 410
++ P + + I+ CK G++ EA F++ ++ G +P ++ Y T+I G+C+ L
Sbjct: 419 VQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A + M++ G+ P++ T+N LI GF G ++ + EM+D+G PN +F+ +
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSM 538
Query: 471 IEGLYESGNEGEVGKVVSMATASGS 495
I+ L++ G E K+ + +G+
Sbjct: 539 IDKLFKEGKVTEARKLFDLMPRAGA 563
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 205/407 (50%), Gaps = 5/407 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
+Y +++ L + + L+ + ++ + C N+ + TVI + G A F
Sbjct: 217 SYTTLLKGLCAEKKCEEAAELIHMMAEDGD-NCPPNVVSYTTVIHGFFKEGDVGKAYTLF 275
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ + +V + N++++ L + + D + + + ++PN T N LI
Sbjct: 276 CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE-HIMPNCTTYNSLIHGYLS 334
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A+R+L EM G PN+VT++ ++ G A+ +F ++ G P+A+T
Sbjct: 335 SGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAST 394
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L+ GY G L D V D M NG+ P + + I A+CK + EA + M
Sbjct: 395 YGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQ 454
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Q+ ++P VID LC+ G+++DA + +++ PD +T+IH GK
Sbjct: 455 QQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWE 514
Query: 378 EAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A++LF E +RG P++ T+N++I + + ++TEA +L+D M G +PNV +YN +I
Sbjct: 515 KAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMI 574
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G+ G E +++L++ML G P +F+ L++G+ G + +V
Sbjct: 575 HGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDV 621
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 22/382 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T +S+I L + +A D E++L ++ + I + ++I Y +G+ AV+
Sbjct: 286 NVVTCNSVIDGLCKVQAMDKAEAVLQQMI-DEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 344
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + +V + + L++ L ++ + +F NS + PN T L+
Sbjct: 345 LKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF-NSMIQSGQKPNASTYGSLLHGYA 403
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++ V D M GM P + Y G ++ A F + +G++PD
Sbjct: 404 TEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIV 463
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
YT ++DG K+GRL DA+ +M D+G+ P+ +T+ +I F K +A L +M
Sbjct: 464 AYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM 523
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R P+ +ID L +EGKV +A +L+ + R P+ +T+IH G++
Sbjct: 524 MDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 583
Query: 377 WEAKKLFDEF--------------------ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
E KL D+ G P ++T TLI CE + + L
Sbjct: 584 GEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTL 643
Query: 417 WDDMVEKGVEPNVFTYNMLIQG 438
+ +M+ K + + T N+ ++G
Sbjct: 644 FREMLGKADKTDTITENIKLRG 665
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD T+ +L+ G L + ++ G+ VT+ ++ C K++ +A N
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR--KNCMPDNAISSTIIH 368
+ L M + P ++ LC E K E+A EL + NC P+ +T+IH
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
KEG + +A LF + + G P+++T N++I G+C+ + +A + M+++ + P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TYN LI G+ G E +RIL+EM G PN ++S+LI+ L +SG E ++
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380
Query: 488 SMATASG 494
+ SG
Sbjct: 381 NSMIQSG 387
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 204/406 (50%), Gaps = 12/406 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +++ L++ + + L+ E+ N + + +I + G L V+ F
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEM-LNSGLNVSAYTYNPLINGFCQKG---LFVEAFDL 307
Query: 140 IEKFNVQRSVRSL---NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+E+ +R+ +L NTL+ L + + V L F + K K P++ + N L+ C
Sbjct: 308 VEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDML-KSKFTPDIVSFNSLLYGYC 366
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + A + DE+ +VP ++T+ T++ G G ++ A R+ ++ D+G PD
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF 426
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT+L++G KLG ++ A +EM G++P+ Y I K + A ++ ++M
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEM 486
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L + P + LC++G E+AC+L + ++ +PD+ ++II+ K G +
Sbjct: 487 LAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A+++F+E +G PS++TY LI L A + M+EK V NV TYN +
Sbjct: 547 RKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
I G C E + +EM +KG PNK S+++LI ES N G
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN---ESCNMG 649
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 162/294 (55%), Gaps = 1/294 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+V CN +++ L ++ + A V M G+ P +VT+ T+L Y G ++ A
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL 235
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ +RG P+ TY VL++G K G L A +++EM ++G+ + TY +I F
Sbjct: 236 ELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGF 295
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ EA +L+++M+ R+ P+ + ++ LC+ +V + +L+ PD
Sbjct: 296 CQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDI 355
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++++ C+ G I EA LFDE + R +P+++TYNTLI G+C L A RL +
Sbjct: 356 VSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE 415
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
M ++G+ P++FTY +L+ G K+G EML KG P++ +++ I G
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 160/320 (50%), Gaps = 1/320 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+F + P V T N ++ + CK+ V+ A+ +L EM G PN VT+ ++ G +G++E
Sbjct: 208 QFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELE 267
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
AK + ++L+ G A TY L++G+ + G +A +++EM + P TY ++
Sbjct: 268 QAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + R DML+ K+ P ++ C G + +A L+ L ++ +
Sbjct: 328 YGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLV 387
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P +T+IH LC G + A +L E ++G P + TY L+ G + ++ A
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGF 447
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+++M+ KG++P+ F YN I G KI + + EEML G P+ ++++ + L +
Sbjct: 448 FNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507
Query: 477 SGNEGEVGKVVSMATASGSV 496
GN E ++ + G +
Sbjct: 508 QGNFEEACDLLENMVSDGLI 527
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 191/392 (48%), Gaps = 6/392 (1%)
Query: 108 PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
P++K N + V+R+ L + A + +E+F ++ +V + NT+L++ + R D
Sbjct: 178 PDVK-NCNRILRVLRDENLLSK---AKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQ 233
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ + + PN T N+L+ L KK ++E A +++EM + G+ + T+ ++
Sbjct: 234 ALELLSEMQER-GCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLI 292
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ +G A + ++++R P +TY LM G K ++T +M +
Sbjct: 293 NGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFT 352
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ V++ ++ +C+ EA L D++ R VP+ +I LC G ++ A L
Sbjct: 353 PDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL 412
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCE 406
K + + PD + +++ K G + A+ F+E +G P YNT I G +
Sbjct: 413 KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMK 472
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
A+ + A + ++M+ G P+V TYN+ + C+ GN +E +LE M+ G P+ +
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
++ +I G ++G+ + +V + + G S
Sbjct: 533 YTSIINGFVKNGHLRKAREVFNEMLSKGVAPS 564
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N+ + ALC++ + E A +L+ M S G++P+ VT+T+I+ G+V G + A+ V
Sbjct: 493 PDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREV 552
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L +G P TYTVL+ + L A +M + V N +TY +I C
Sbjct: 553 FNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCM 612
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA D+M ++ +P+ +I+ C G E+A L++ +L + PD+
Sbjct: 613 TRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFT 672
Query: 363 SSTIIHWLCKEGKI 376
S + L ++ ++
Sbjct: 673 HSVFLKNLHRDYQV 686
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 51/292 (17%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ F N I K D A + +EM + G P+++T+ + +G+ E A +
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 517
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ G +PD TYT +++G++K G L A +V +EM GV P+ VTY V+I A
Sbjct: 518 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA--- 574
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A+ +LD A + ++L K+ +P N I
Sbjct: 575 ----HAAKQMLD----------------------------LAFMYFSKMLEKS-VPANVI 601
Query: 363 S-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + II+ LC ++ EA K FDE E+G +P+ +Y LI C EA RL+ +M
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 421 VEKGVEPNVFTYNMLIQGFCK-------------IGNAKEGIRILEEMLDKG 459
+++ ++P+ FT+++ ++ + I N ++ I + EML G
Sbjct: 662 LDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINVRIEMLIGG 713
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 93/164 (56%), Gaps = 1/164 (0%)
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ D M++ +P C +++ +L +E + A ++ + + P +T++ C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ +A +L E ERG P+ +TYN L+ G+ + EL +A L ++M+ G+ + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
TYN LI GFC+ G E ++EEM+++ FP ++++ L+ GL
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+FD+ R G +P + N ++ + + L++A ++ M + G++P V TYN ++ +C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGSVESD 499
K G + + +L EM ++GC+PN ++++L+ GL + G E G + M + +V +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 500 SWNFLL 505
++N L+
Sbjct: 287 TYNPLI 292
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 211/460 (45%), Gaps = 71/460 (15%)
Query: 86 HKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRP------------ 130
H LARAR F SLL+ L +P + + ++ LA P
Sbjct: 78 HILARARLFPHSRSLLSRLLAPGHHPHLAAS---LVDLLHRAALALGPRRSALPSVVDTL 134
Query: 131 ----------ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK 180
+ AV R+ + V + R+ N +L L + + +L +F+
Sbjct: 135 LSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP---- 190
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
PNVFT NI+I LCK+ D+ A +L M ++G P++VT+ +++ GY G++E +
Sbjct: 191 -APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVE 249
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ G++ G PD TY L++ + K GR+ A EM+ GV N VT+ ++AF
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAF 309
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK EA L M + P+ ++D C+ G+++DA L ++++ +P N
Sbjct: 310 CKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG-VPLN 368
Query: 361 AISSTI-IHWLCKEGKIWEAKKLFDEFERGSIP-----------------------SLLT 396
++ T+ + LCKEGK+ EA+ +F ER I SLL+
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS 428
Query: 397 -------------YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
Y LI G+C +L EA L + M E G++PN Y ++ K
Sbjct: 429 EMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKAR 488
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
E I +L++M+D G PN ++ L++GL ++G+ E
Sbjct: 489 KESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEA 528
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 211/466 (45%), Gaps = 51/466 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I + + VE L+ E++ P++ + ++ + GR E A
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVV----TYNALVNCFCKFGRMERAYSY 286
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +++ V +V + +T ++A +N +F R K + PN T L+ C
Sbjct: 287 FAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMK-GMKPNEVTYTCLVDGTC 345
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF------------- 243
K ++ A+ + +EM G+ N+VT+T ++ G G + A+ VF
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL 405
Query: 244 ----------------------GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
++ D+G D + Y L+ G L +L +A ++++M
Sbjct: 406 LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
++ G++PN V Y +++A K +K EA LL M+ + P+ C ++D LC+ G +
Sbjct: 466 DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSI 525
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
++A + +++ P+ + ++ LCK G++ +A L DE ++G + +L
Sbjct: 526 DEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSL 585
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G + L +A L M+ G++ +++ Y + GFC + +E +L EM++ G
Sbjct: 586 MDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGI 645
Query: 461 FPNKTSFSLLIEGLYESGN-------EGEVGKVVSMATASGSVESD 499
P+ ++ LI + GN + E+ ++S A + SD
Sbjct: 646 TPDAVVYNCLINKCQKLGNMEEAAILQNEMESLLSCTNADAASGSD 691
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 203/432 (46%), Gaps = 5/432 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y S+I L +A E L +++ + C + T+I YG AGR E A K R
Sbjct: 20 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA-YAYNTMIMGYGSAGRFEDAYKLLER 78
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + SV S N++L L + ++ D +F+ + + PN T NI+I LC
Sbjct: 79 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGG 136
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
VE A R+LDEM + PNL+T ++ +E A ++F RG PD TY
Sbjct: 137 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 196
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG K G++ +A ++ ++M D G N V Y +I F + + + ++++R
Sbjct: 197 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P L +D + + G+VE +++ + +PD S +IH L K G+ E
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+F ++G YN ++ G C+S ++ +A + ++M EK V+P V TY ++ G
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 376
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVE 497
KI E + EE KG N +S LI+G + G E ++ G +
Sbjct: 377 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436
Query: 498 SDSWNFLLTRIV 509
+WN LL +V
Sbjct: 437 VYTWNSLLDALV 448
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 212/463 (45%), Gaps = 40/463 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+++SI+ L + R D SL +K++ E + + +I L GR E A +
Sbjct: 90 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPN--SSTYNIIIDMLCLGGRVEEAYRILDE 147
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ ++ ++N +++ L + ++ + + +F+++ + P+ T LI L KK
Sbjct: 148 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR-GCNPDCVTYCSLIDGLGKKG 206
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A R+ ++M G N V +T+++ + G E+ ++F +++ RG PD T
Sbjct: 207 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 266
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
MD K G + + +++ G P+ +Y ++I K ++ E N+ M Q+
Sbjct: 267 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 326
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ + V+D C+ GKV A E+ + + K P A I+ L K ++ EA
Sbjct: 327 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 386
Query: 380 KKLFDE------------------------------------FERGSIPSLLTYNTLIAG 403
LF+E ++G P++ T+N+L+
Sbjct: 387 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 446
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ ++ E+ EA + M E PN +TY++LI G C++ + ++M +G PN
Sbjct: 447 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 506
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+++ +I GL + GN + + A+G + ++ S+N L+
Sbjct: 507 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 549
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 192/408 (47%), Gaps = 9/408 (2%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLA 127
H + N T + ++ +L +AR + + Q NP+ + ++I G
Sbjct: 150 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT----YCSLIDGLGKK 205
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A + F ++ + +L+ + R + H +FK + P++
Sbjct: 206 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR-GCKPDLTL 264
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N + + K +VE + +++ S G +P++ +++ ++ G G +F +
Sbjct: 265 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 324
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+G+ DA Y ++DG+ K G++ A ++++EM++ V+P TYG +++ K +
Sbjct: 325 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 384
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L ++ + + L +ID + G++++A + + +++K P+ ++++
Sbjct: 385 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L K +I EA F E P+ TY+ LI G+C + +A W DM ++G+
Sbjct: 445 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 504
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
PNV TY +I G K+GN + + E G P+ SF+ LIEG+
Sbjct: 505 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 198/418 (47%), Gaps = 13/418 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P L +V + + + L+ A +IF A + N + TY S+I L + D
Sbjct: 154 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN--PDCVTYCSLIDGLGKKGQVDEA 211
Query: 98 ESLLTELKQNPEIKCGEN----LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
L ++ + G N ++ ++IRN+ + GR E K F + + + + LN
Sbjct: 212 YRLFEKM-----LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 266
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
T ++ + + + ++F++ R + +P+V + +ILI L K + M
Sbjct: 267 TYMDCVFKAGEVEKGRMIFEDIR-SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 325
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G + + ++ G+ G + A + ++ ++ P TY ++DG K+ RL +
Sbjct: 326 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 385
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A + +E + G+E N V Y +I+ F K + EA +L++M+++ P+ ++D
Sbjct: 386 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 445
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIP 392
L + ++ +A ++ + C P+ S +I+ LC+ K +A + + ++ G +P
Sbjct: 446 ALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP 505
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+++TY T+I+G+ + +T+A L++ G P+ ++N LI+G A E +
Sbjct: 506 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + F ++ +G PD +YT ++ K GRL +A ++ +ME P Y MI
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + +A LL+ + +R +PS ++ L ++ KV++A L++ +++K+ P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEP 120
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
+++ + II LC G++ EA ++ DE E S+ P+LLT N ++ +C++ +L EA +++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ ++G P+ TY LI G K G E R+ E+MLD G N ++ LI +
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240
Query: 478 GNEGEVGKV 486
G + + K+
Sbjct: 241 GRKEDGHKI 249
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A K F E + +G P ++Y ++I +C++ L EA L+ M + P + YN +I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G+ G ++ ++LE + ++GC P+ SF+ ++ L + E + +
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121
Query: 498 SDSWNFLL 505
S ++N ++
Sbjct: 122 SSTYNIII 129
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 84/462 (18%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR E F I K + + N LL L KR D + +F PNV +
Sbjct: 209 GRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVS 268
Query: 188 CNILIKALCKKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
N L+K C ++ E A+ +L M + P++V++ T++ G+ G ++ A +F
Sbjct: 269 YNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFL 328
Query: 245 DILDRGWVPDATTYTVLMD-----------------------------------GYIKLG 269
++DRG PD TY ++D GY+ G
Sbjct: 329 QMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTG 388
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS---- 325
+ + V++++EM + +EP+ Y ++++ CK + EARN+ D ++++ P +
Sbjct: 389 KWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDE 448
Query: 326 ALCC-----------------KVIDLLCEEGKVEDA----------------CELWKR-- 350
A+C +ID LC+ G+V+DA E W++
Sbjct: 449 AVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAE 508
Query: 351 -----LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGM 404
+L + D + +T++ LC+EG++ EA++L + R G P +++YNTL+ G
Sbjct: 509 ELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGH 568
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + EA +L D MV G++PN FTYN L+ G+CK + +L EML G P+
Sbjct: 569 CLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDV 628
Query: 465 TSFSLLIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLL 505
+++ ++ GL+++G E ++ ++M + + ++N +L
Sbjct: 629 VTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIIL 670
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 217/506 (42%), Gaps = 50/506 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ FR+ +D A +F + TY+++I L +A+ D +++ ++
Sbjct: 310 VINGFFREGQVDKAYNLF--LQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQM-L 366
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-- 164
+ +K + +I Y G+ + V+ + +++ LL+ L +N R
Sbjct: 367 DKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCT 426
Query: 165 -------------------YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
D +F R + + PNV LI ALCK V+ AI
Sbjct: 427 EARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQ-GLSPNVVNYGALIDALCKLGRVDDAI 485
Query: 206 -----------------------RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
++ EM G+ ++V T++ G + A+R+
Sbjct: 486 LKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRL 545
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L G PD +Y L+DG+ GR +A K++D M G++PNE TY ++ +CK
Sbjct: 546 IELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCK 605
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ +A +LL +ML P ++ L + G+ +A EL+ ++ D
Sbjct: 606 ARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYT 665
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ I++ LCK + EA K+F +G ++T+N +I + + + +A L+ +
Sbjct: 666 YNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATIS 725
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G+ P+V TY ++ + K G+ +E + M + G PN + L+ G+
Sbjct: 726 AYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDIS 785
Query: 482 EVGKVVS-MATASGSVESDSWNFLLT 506
G +S + + S+E+ + + L++
Sbjct: 786 RAGAYLSKLDEKNFSLEASTASMLIS 811
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 34/281 (12%)
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P+ T++ ++G + G +E+ VFG IL GW + + L+ G RL +A
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250
Query: 276 KVMD-EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++ M + G PN V+Y +++ FC ++ EA LL M + +
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGL------------ 298
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
+C PD +T+I+ +EG++ +A LF + +RG P
Sbjct: 299 --------------------SCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPD 338
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYNT+I G+C++ + A ++ M++KGV+P+ TYN LI G+ G KE +R+LE
Sbjct: 339 VVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLE 398
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
EM P+ ++LL++ L ++G E + G
Sbjct: 399 EMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKG 439
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 192/368 (52%), Gaps = 16/368 (4%)
Query: 147 RSVRSLNTLLNALVQ--NKRYD-LVHL-----MFKNSRHKFK------VVPNVFTCNILI 192
+S R L +++A ++ NK Y+ L++ M+K S FK ++P V CN I
Sbjct: 210 KSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFI 269
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
ALC+ + ++ A + D M G PN+++++T+L GY G N + ++ +G V
Sbjct: 270 HALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIV 329
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ + +L++ Y + G + A+ + ++M++ G+ P+ VT+ +I + C+ + +A +
Sbjct: 330 PNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 389
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA-ISSTIIHWLC 371
+ M+ PS A+ +I C G++ A EL ++ K+ P S+II+ L
Sbjct: 390 FNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLF 449
Query: 372 KEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ E K + D + G P+++T+N+L+ G C + EA L D M G+EPN +
Sbjct: 450 KEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 509
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
Y L+ G+CK G + + + +ML KG P +++++ GL+++ K+
Sbjct: 510 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEM 569
Query: 491 TASGSVES 498
SG+ S
Sbjct: 570 IESGTTVS 577
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 171/347 (49%), Gaps = 3/347 (0%)
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
R N L+NA + D L+F++ ++K ++P+ T +I +LC+ ++ A+ +
Sbjct: 333 RFFNILINAYARCGMMDKAMLIFEDMQNK-GMIPDTVTFATVISSLCRIGRLDDALHKFN 391
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY-TVLMDGYIKL 268
M +G+ P+ + ++ G G++ AK + +++++ P Y + +++ K
Sbjct: 392 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKE 451
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR+ + +MD M G PN VT+ ++E +C EA LLD M P+ +
Sbjct: 452 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
++D C+ G+++DA +++ +L K P + + + I+H L + + AKK+F E E
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G+ S+ TY ++ G+C + EA L + + V+ ++ T+N++I K+G +E
Sbjct: 572 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQE 631
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ + G P +++L+I L + + E + SG
Sbjct: 632 AKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSG 678
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 205/430 (47%), Gaps = 6/430 (1%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ ++ +D A ++F+ + S + TY+S+I L + + E +L ++
Sbjct: 163 LIDGFSKEGEVDKAYELFY--KMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM-V 219
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ I+ + ++I Y AG + +V+ F + + V + N+ ++AL ++ R
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+F + K PN+ + + L+ + +++ M S G+VPN +
Sbjct: 280 EAKDIFDSMVLK-GPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNIL 338
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ Y G ++ A +F D+ ++G +PD T+ ++ ++GRL DA+ + M D GV
Sbjct: 339 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 398
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA-LCCKVIDLLCEEGKVEDAC 345
P+E Y +I+ C + +A+ L+ +M+ + P +I+ L +EG+V +
Sbjct: 399 PPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGK 458
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGM 404
++ +++ P+ ++++ C G + EA L D I P+ Y TL+ G
Sbjct: 459 DIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 518
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C++ + +A ++ DM+ KGV+P YN+++ G + ++ EM++ G +
Sbjct: 519 CKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSI 578
Query: 465 TSFSLLIEGL 474
++ +++ GL
Sbjct: 579 QTYGVVLGGL 588
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 147/310 (47%), Gaps = 4/310 (1%)
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H P ++T NILI + E A+ V + G+ P++ ++ T++ G+ G++
Sbjct: 114 HAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEV 173
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A +F ++++ PD TY L+DG K + + +V+++M D G+ PN TY +
Sbjct: 174 DKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSL 233
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I + E+ + +M +P C I LC ++++A +++ ++ K
Sbjct: 234 IYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP 293
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ ST++H EG L + +G +P+ +N LI + +A
Sbjct: 294 KPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAML 353
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+++DM KG+ P+ T+ +I C+IG + + M+D G P++ + LI+G
Sbjct: 354 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQG-- 411
Query: 476 ESGNEGEVGK 485
N GE+ K
Sbjct: 412 -CCNHGELVK 420
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 167/382 (43%), Gaps = 5/382 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N+ ++ +I+ AR D L+ E QN + F TVI + GR + A+
Sbjct: 331 NHRFFNILINAYARCGMMDKA-MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 389
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V S L+ + + +K P V + +I L
Sbjct: 390 FNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLF 449
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ V ++D M G PN+VT +++ GY G++E A + + G P+
Sbjct: 450 KEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 509
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+DGY K GR+ DA+ V +M GV+P V Y +++ + +++ A+ + +M
Sbjct: 510 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEM 569
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ S V+ LC ++A L ++L N D + +I + K G+
Sbjct: 570 IESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRR 629
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EAK+LF G +P++ TYN +I+ + + EA L+ + + G P+ N +
Sbjct: 630 QEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHI 689
Query: 436 IQGFCK---IGNAKEGIRILEE 454
++ K + A + I++E
Sbjct: 690 VRMLLKKAEVAKASNYLSIIDE 711
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 8/306 (2%)
Query: 81 YHSIIHKL---ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+ SII+ L R + L+ + Q P + F +++ Y L G E A
Sbjct: 441 FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT----FNSLMEGYCLVGNMEEAFALL 496
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + TL++ +N R D +F++ HK V P NI++ L +
Sbjct: 497 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK-GVKPTSVLYNIILHGLFQ 555
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++ EM G ++ T+ +LGG + A + + D T
Sbjct: 556 ARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 615
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ +K+GR +A ++ + G+ P TY +MI K + EA NL +
Sbjct: 616 FNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVE 675
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P S L ++ +L ++ +V A + N + + S + +EGK
Sbjct: 676 KSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCR 735
Query: 378 EAKKLF 383
E KL
Sbjct: 736 EHIKLL 741
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 188/368 (51%), Gaps = 25/368 (6%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ S N L LV+N + L K K + PN+++ N ++ LCK + A ++
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQLALKEMVDK-GIEPNIYSFNTVMDGLCKNGLISDARMIM 388
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
M S G+ P+ VT++T+L G G + A + +++ RG P+ T +L+ K
Sbjct: 389 GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE 448
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML----------- 317
GR+ +A K++ +M + + + VT ++I+ CK K EA +++ M
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLG 508
Query: 318 ------------QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+K +P +I+ LC+ G++++A + + ++ K+ PD+ I T
Sbjct: 509 NSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDT 568
Query: 366 IIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
IH CK GKI A ++ + E RG SL TYN+LI G+ ++ E L DDM EKG
Sbjct: 569 FIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKG 628
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ PN+ TYN +I C+ G K+ +L+EML KG PN +SF LLI+ ++ + G V
Sbjct: 629 ITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVK 688
Query: 485 KVVSMATA 492
+V +A +
Sbjct: 689 EVFEIALS 696
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 196/386 (50%), Gaps = 27/386 (6%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
++ T+I ++ GR E A + R+ + + V + N+ ++AL + +F++
Sbjct: 223 IYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDM 282
Query: 176 RHKFKV---VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ ++ PN+ T N++++ CK+ +E A +++ M G + L ++ L G V
Sbjct: 283 QIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVR 342
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + A+ +++D+G P+ ++ +MDG K G ++DA +M M +G+ P+ VT
Sbjct: 343 NGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVT 402
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++ C K +A N+L +M++R P++ C ++ L +EG++ +A +L +++
Sbjct: 403 YSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMN 462
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKK----------------------LFDEFERGS 390
++ DN + +I LCK GK+ EA + L D G
Sbjct: 463 ERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522
Query: 391 --IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+P L+TY+ +I G+C++ L EA + + +MV K + P+ Y+ I FCK G
Sbjct: 523 KCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSA 582
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGL 474
R+L++M +GC + +++ LI GL
Sbjct: 583 FRVLKDMEKRGCNKSLQTYNSLILGL 608
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 172/334 (51%), Gaps = 6/334 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKV-VPNVFTCNILIKALCKKDDVEGAIRVLD 209
SL L+ L ++ DL F++ R + P V+ N+++++ ++D V+ +
Sbjct: 81 SLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYK 140
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M G+ P T ++ G G E+A+ VF + +G P+ ++ +L+ GY + G
Sbjct: 141 DMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAG 200
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
A++++D M GV+PN+V Y +I +FC+ ++ EA L++ M + P
Sbjct: 201 LSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFN 260
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTIIHWLCKEGKIWEAKKLFDE 385
I LC GK+ +A +++ + + P+ + ++ CKEG + EAK L +
Sbjct: 261 SRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVES 320
Query: 386 FER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+R G++ L +YN + G+ + +L EA +MV+KG+EPN++++N ++ G CK G
Sbjct: 321 MKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGL 380
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ I+ M+ G P+ ++S L+ G +G
Sbjct: 381 ISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTG 414
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 182/385 (47%), Gaps = 6/385 (1%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V +LN L+ L + R++ +F K PN F+ IL++ C+ A
Sbjct: 147 VSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVK-GCRPNEFSFGILVRGYCRAGLSMRA 205
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +LD M S G+ PN V + T++ + G E A+R+ + + G PD T+ +
Sbjct: 206 LELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISA 265
Query: 265 YIKLGRLTDAVKVMDEM---EDNGV-EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
G++ +A ++ +M E+ G+ PN T+ +M+E FCK EA+ L++ M +
Sbjct: 266 LCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNG 325
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+ + L GK+ +A K ++ K P+ +T++ LCK G I +A+
Sbjct: 326 NLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDAR 385
Query: 381 KLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ G P +TY+TL+ G C + ++ +A + +M+ +G PN +T N+L+
Sbjct: 386 MIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL 445
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
K G E ++L++M ++ + + +++I+GL +SG E ++V GS
Sbjct: 446 WKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALG 505
Query: 500 SWNFLLTRIVSDLDSGAGALDELLV 524
+ +V +G L +L+
Sbjct: 506 NLGNSFIGLVDSSSNGKKCLPDLIT 530
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 5/282 (1%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P + + +L + +++ ++ D++ G P+ T +L+ G GR DA +V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
D+M G PNE ++G+++ +C+ S A LLD M P+ + +I C
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-----DEFERGSIP 392
EG+ E+A L +R+ PD ++ I LC GKI EA ++F DE P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++ T+N ++ G C+ L EA L + M G + +YN+ + G + G E L
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+EM+DKG PN SF+ +++GL ++G + ++ + +SG
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSG 395
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 168/356 (47%), Gaps = 34/356 (9%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM- 211
N LL++L + R + + + + NV TCNI+I LCK ++ A+ +++ M
Sbjct: 439 NILLHSLWKEGRIFEAEKLLQKMNERSYDLDNV-TCNIVIDGLCKSGKLDEAVEIVEGMW 497
Query: 212 ------------PSMGMV----------PNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+G+V P+L+T++ I+ G G ++ A++ F +++ +
Sbjct: 498 IHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK 557
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
PD+ Y + + K G+++ A +V+ +ME G + TY +I + E
Sbjct: 558 SLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEI 617
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LLDDM ++ P+ +I LCE G+++DA L +L+K P+ + +I
Sbjct: 618 YGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKA 677
Query: 370 LCKEGKIWEAKKLFDEF-----ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
CK K++F+ + ++ SL+ LI G E++EA L+D +++
Sbjct: 678 FCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGG-----EVSEAKELFDAALDRC 732
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ F YN LI+ CK + IL +M+DKG + SF +I+GL + G +
Sbjct: 733 FDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKK 788
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 13/304 (4%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ +S + K +P++ T +I+I LCK ++ A + EM + P+ + + T + +
Sbjct: 514 LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSF 573
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G I +A RV D+ RG TY L+ G ++ + ++D+M++ G+ PN
Sbjct: 574 CKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
TY MI C+G + +A +LLD+MLQ+ P+ + +I C+ E+++
Sbjct: 634 CTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEI 693
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-----FERGSIPSLLTYNTLIAGMC 405
L C A+ S + + L G++ EAK+LFD F+ G+ YN LI +C
Sbjct: 694 ALSI-CGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGN----FQYNDLIEKLC 748
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD---KGCFP 462
+ L A + M++KG + ++ +I G K G + + E M+D +G
Sbjct: 749 KDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVE 808
Query: 463 NKTS 466
NK +
Sbjct: 809 NKIT 812
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 3/273 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY II+ L +A D E+ + ++ T I ++ G+ A +
Sbjct: 530 TYSIIINGLCKAGRLDEARKKFIEM-VGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKD 588
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+EK +S+++ N+L+ L + ++ + + + K + PN+ T N +I LC+
Sbjct: 589 MEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEK-GITPNICTYNNMISCLCEGG 647
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A +LDEM G+ PN+ + ++ + D K VF L +A Y+
Sbjct: 648 RIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEAL-YS 706
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ + + G +++A ++ D D + Y +IE CK + A ++L M+ +
Sbjct: 707 LMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDK 766
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y A VID L + GK DA EL +R++
Sbjct: 767 GYRFDPASFMPVIDGLGKRGKKHDADELAERMM 799
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 161/300 (53%), Gaps = 1/300 (0%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V PN +T N LI LC++ V A+ VLD+M G P++VT+ +L
Sbjct: 161 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 220
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + + G P+ TY VLMDG G + DA++++ + +G +P+ V Y +++
Sbjct: 221 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C ++ G+A L+ +ML+ P+ A VI LC +G ++ A +L +++ + C
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 340
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ + II+ LC++ + A L + + G P ++TYNTL+ G+C +A+ +A L
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D+M + G P+ T+N LI C+ G + I + ++M DKGC PN ++S +I GL ++
Sbjct: 401 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 460
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 174/369 (47%), Gaps = 44/369 (11%)
Query: 149 VRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V + N LL A + + Y +L+ LM PN T N+L+ +C + DV+ A
Sbjct: 202 VVTYNILLEATCKGRGYRQAMELIDLMRAEG-----CTPNNVTYNVLMDGMCGEGDVDDA 256
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L +PS G P+ V + T+L G +A + ++L P+ T+ V++
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ G L A++++++M +G N VTY +I C+ + A LL M P
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 376
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
++ LC + DA EL + + C+PDN +T+I +LC++G + +A ++F
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK 436
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK-------------------- 423
+ ++G P+ +TY+T+I+G+ ++ +L +A L+++M K
Sbjct: 437 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDT 496
Query: 424 --------------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
G+ P+ YN ++ G C+ G + I I+ M+ GC P+ ++ +
Sbjct: 497 IEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVI 556
Query: 470 LIEGLYESG 478
LIEGL G
Sbjct: 557 LIEGLAYEG 565
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 152/314 (48%), Gaps = 2/314 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P+V T NIL++A CK A+ ++D M + G PN VT+ ++ G GD+++A
Sbjct: 199 APDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALE 258
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ G P Y ++ G R DA +++ EM PNE T+ V+I + C
Sbjct: 259 LLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLC 318
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ +A LL+ M + + +I+ LCE+ V+ A L ++ C PD
Sbjct: 319 RKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIV 378
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T++ LC + +A++L D + G +P +T+NTLI +C+ + +A ++ M
Sbjct: 379 TYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 438
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+KG PN TY+ +I G K + + + EM KG P+K + LL E L +
Sbjct: 439 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTI 497
Query: 481 GEVGKVVSMATASG 494
E + V SG
Sbjct: 498 EEAIQTVRKLQDSG 511
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 11/321 (3%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ AL + D++ A+R+++ P P+ ++ RG ++A+RV G G
Sbjct: 78 LSALVHRGDLDAALRLVESSPR---PPDAALANRLVRDLCRRGRPDDAERVVGAC---GP 131
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
Y L DGY + GRL DA +V+ M V+PN TY +I C+ + +A +
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALS 188
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+LDDML R P +++ C+ A EL + + C P+N + ++ +C
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
EG + +A +L G PS + YNT++ G+C + +A L +M+ + PN
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 308
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSM 489
T+N++I C+ G ++ I++LE+M GC N +++ +I GL E N +G +G + M
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368
Query: 490 ATASGSVESDSWNFLLTRIVS 510
+ + ++N LL + S
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCS 389
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 142/319 (44%), Gaps = 38/319 (11%)
Query: 81 YHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y++++ L A + + L+TE L++N E F VI + G + A++ +
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLREN--CPPNEATFNVVIYSLCRKGLLQQAIQLLEK 332
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K ++ + N ++N L + + D + + + P++ T N L+K LC
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK-SYGCKPDIVTYNTLLKGLCSAA 391
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A ++D M G +P+ VT T++G +G + +A VF + D+G P++ TY+
Sbjct: 392 QWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 451
Query: 260 VLMDGYIKLGRLTDAVKVMDEM----------------------------------EDNG 285
++ G K +L A+++ +EM +D+G
Sbjct: 452 TIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSG 511
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P+ V Y ++ C+ K+ A +++ M+ +P +I+ L EG + +A
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 571
Query: 346 ELWKRLLRKNCMPDNAISS 364
EL +L ++ + ++ I S
Sbjct: 572 ELLIKLCSRDVLVNSLIKS 590
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 111/210 (52%), Gaps = 12/210 (5%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS--TIIHWLCKEGKIWEAK 380
P +AL +++ LC G+ +DA +R++ C P + + + C+ G++ +A+
Sbjct: 101 PDAALANRLVRDLCRRGRPDDA----ERVVGA-CGPAATVVAYGALTDGYCRAGRLGDAR 155
Query: 381 KLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
++ P+ TYN LI +CE ++ +A + DDM+ +G P+V TYN+L++ C
Sbjct: 156 RVVGGMP--VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATC 213
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD- 499
K ++ + +++ M +GC PN ++++L++G+ G+ + +++ + G S
Sbjct: 214 KGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTV 273
Query: 500 SWNFLLTRIVSDLDSGAG--ALDELLVKNC 527
++N +L + S G + E+L +NC
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLRENC 303
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 42/290 (14%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRP 130
N N T++ +I+ L R LL ++ ++ C N+ + +I
Sbjct: 302 NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH---GCTANIVTYNAIINGLCEQRNV 358
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCN 189
+ A+ +++ + + + + NTLL L ++ D LM +++ +P+ T N
Sbjct: 359 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNG--CLPDNVTFN 416
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI LC+K + AI V +MP G PN +T++TI+ G ++ A +F ++ +
Sbjct: 417 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 476
Query: 250 GWVPD----------------------------------ATTYTVLMDGYIKLGRLTDAV 275
G+ PD Y ++ G + G+ A+
Sbjct: 477 GFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 536
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+M M +G P+++TY ++IE EAR LL + R + +S
Sbjct: 537 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNS 586
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + Q+N+D A+ + + + TY++++ L A + E L+ + Q
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSY--GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405
Query: 107 NPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
N + +N+ F T+I G A++ F ++ + + +T+++ L + +
Sbjct: 406 NGCLP--DNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 463
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
D +F HK ++ +L + L D +E AI+ + ++ G+ P+ V +
Sbjct: 464 DQALELFNEMGHKGFNPDKIY--QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
IL G G E A + ++ G +PD TY +L++G G L +A +++
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 196/366 (53%), Gaps = 7/366 (1%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
AL +FH F +Y +Y ++++KLAR + F AVE +L + ++ + C E +FI
Sbjct: 47 ALTLFHEY--LQRGFKPDYPSYAALLYKLARCQDFGAVEEVLRYV-EDKNVHCQETIFIA 103
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF-KNSRHK 178
+ ++YG A AV+ F R+ +FN R+ +SLN+LLN LV N + + +F K
Sbjct: 104 LFQHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMG 163
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F++ N N++IK +K + E A +V DEM + P++VT+ +++G G+++
Sbjct: 164 FRL--NSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDK 221
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK + D++ +G P+A T+ +LM+G +G +A K+M +ME G +P V +GV++
Sbjct: 222 AKGLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMS 281
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K K EA+++L +M +R P +I+ LC+EG+ DA E+ + C
Sbjct: 282 DLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEA 341
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ A ++ C+ G K+ + G P + T+ +L+ G+ +S L A +
Sbjct: 342 NAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVL 401
Query: 418 DDMVEK 423
++M ++
Sbjct: 402 EEMEKR 407
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 156/317 (49%), Gaps = 2/317 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L + K V A+ + + M V + ++L V G A +F + G
Sbjct: 104 LFQHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMG 163
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ ++ + V++ G+++ G A KV DEM + VEP+ VTY +I C+ + +A+
Sbjct: 164 FRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAK 223
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL+DM+++ P++ +++ C G+ +A ++ + + C P ++ L
Sbjct: 224 GLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDL 283
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K GKI EAK + E ++ + P ++TYN LI +C+ +A + +M G E N
Sbjct: 284 GKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANA 343
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVS 488
TY ML+ GFC++G+ + G+++L ML G FP +F L+ GL +SGN +G +
Sbjct: 344 ATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEE 403
Query: 489 MATASGSVESDSWNFLL 505
M +D W L+
Sbjct: 404 MEKRQMMFCADDWEALV 420
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 131/250 (52%), Gaps = 7/250 (2%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTD--AVK-VMDEMEDNGVEPNEVTYGVMIE 298
+F + L RG+ PD +Y L+ KL R D AV+ V+ +ED V E + + +
Sbjct: 50 LFHEYLQRGFKPDYPSYAALL---YKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALFQ 106
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ K + +A L + M + V +S ++++L + G +A EL+ +
Sbjct: 107 HYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRL 166
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
++ + +I ++G+ +A K+FDE ER PS++TYN+LI +C + EL +A L
Sbjct: 167 NSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLL 226
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+DM++KG PN T+ +L++G C IG E +++ +M +GC P +F +L+ L +
Sbjct: 227 EDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKR 286
Query: 478 GNEGEVGKVV 487
G E V+
Sbjct: 287 GKIDEAKSVL 296
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/556 (25%), Positives = 240/556 (43%), Gaps = 55/556 (9%)
Query: 18 SIGGARCSLSTITVTPPIKPWPQ----------RLYPKR-----LVSMIFRQQNLDLALQ 62
S+ A LS + +P P RL+P LV + L AL
Sbjct: 166 SLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALS 225
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
F S + TY+++++ R +LL +K++ + + T++
Sbjct: 226 TLSTMQGF--GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKD-GVAPTRPTYNTLVS 282
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
Y G + A K + + + + N L L Q + D + ++
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T N L A K A+R+L+EM G+ LVTH ++ G G++E A
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE--------------- 287
+ D G PD TY L+ + K G + A +MDEM G++
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462
Query: 288 --------------------PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
P+EV+YG ++ A+ K S A L D+M+++K PS +
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I L G++++A + L+ K +PD+ + IIH CKEG + A + ++
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
S P ++T NTL+ G+C + +L +A +L++ VEKG + +V TYN LIQ CK G+
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+ +M +G P+ ++++++ L E+G E ++ SG++ +S S L
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLK 702
Query: 506 TRIVSDLDSGAGALDE 521
V + +SG A E
Sbjct: 703 PSSVDEAESGKDAKTE 718
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 185/424 (43%), Gaps = 74/424 (17%)
Query: 130 PELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFT 187
P LA + + + V+ S+++ N +L+AL ++ L S ++ PN +T
Sbjct: 147 PHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYT 206
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+L+ C K + A+ L M G+ P+ VT+ T+L + +G + A+ + +
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P TY L+ Y +LG + A KV++ M NG EP+ TY V+ C+ K
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326
Query: 308 EA----------RNLLDDMLQRKYVPSSALCCK--------------------------V 331
EA LL D++ + + C+ V
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF----- 386
I LC++G++E A ++ PD +T+IH CK G I +A L DE
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446
Query: 387 -------------------------------ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+RG +P ++Y T++A + A R
Sbjct: 447 KLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR 506
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
LWD+M+EK + P++ TYN LI+G ++G KE I L E+++KG P+ T+++++I
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566
Query: 476 ESGN 479
+ G+
Sbjct: 567 KEGD 570
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 211/457 (46%), Gaps = 55/457 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++ + R LL E+++ +K VI+ G E A+ +
Sbjct: 347 TYNTLADACFKCRCSSDALRLLEEMREK-GVKATLVTHNIVIKGLCKDGELEGALGCLNK 405
Query: 140 IEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + V + NTL++A + K Y L+ M R K+ + FT N ++ L
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV---RRGLKL--DTFTLNTVLYNL 460
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK+ E A +L P G +P+ V++ T++ Y + E A R++ +++++ P
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSI 520
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+TY L+ G ++GRL +A+ ++E+ + G+ P++ TY ++I A+CK
Sbjct: 521 STYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCK------------- 567
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
EG +E+A + +++ + PD +T+++ LC GK
Sbjct: 568 ----------------------EGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A KLF+ + E+G ++TYNTLI MC+ ++ A + DM +G++P+ FTYN+
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ + G +E +L ++ + G S LL S +E E GK +
Sbjct: 666 VLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPS---SVDEAESGKDAKTEEETV 722
Query: 495 SVESDSWNFLLTRIVSDL------DSGAGALDELLVK 525
DS + T++V+ L LDE++ K
Sbjct: 723 ENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQK 759
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K+ P++ T N LIK L + ++ AI L+E+ G+VP+ T+ I+ Y GD+ENA
Sbjct: 515 KLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENA 574
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ +++ + PD T LM+G G+L A+K+ + + G + + +TY +I+
Sbjct: 575 FQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQT 634
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK A + DM R P + V+ L E G+ E+A + +L +
Sbjct: 635 MCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQ 694
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ S + E + + K +E E + Y L+ G+C S + EA + D
Sbjct: 695 SFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILD 754
Query: 419 DMVEKGVEPNVFTYNMLIQGFCK 441
+M++KG+ + TY L++G K
Sbjct: 755 EMMQKGMSVDSSTYITLMEGLVK 777
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 129/280 (46%), Gaps = 15/280 (5%)
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN--VQRSVRSLNTLLNA 158
+ E K P I + T+I+ GR + A I+K N +++ + +T N
Sbjct: 511 MIEKKLTPSIST----YNTLIKGLSRMGRLKEA------IDKLNELMEKGLVPDDTTYNI 560
Query: 159 LVQN--KRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ K DL + F N + P+V TCN L+ LC ++ A+++ + G
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+++T+ T++ GD++ A F D+ RG PDA TY V++ + GR +A
Sbjct: 621 KKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ ++ ++G + ++ + +SG+ ++ ++ +S K+++ L
Sbjct: 681 NMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGL 740
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
C G+ ++A + +++K D++ T++ L K K
Sbjct: 741 CTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLCEEGKVED 343
G P+ + A+ + + A LL + +R V PS V+ L
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP 185
Query: 344 ACEL--WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTL 400
L ++ ++ P++ + ++H C +G + +A + G P +TYNTL
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ C L EA L M + GV P TYN L+ + ++G K+ +++E M G
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ ++++L GL ++G E ++
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRL 331
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 22/362 (6%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PNV+ I I+ LC+++ +E A ++ + M G+VPNL T++ ++ GY G++ A
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY 323
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ +IL +P+ + L+DG+ K L A + M GV+PN Y +I
Sbjct: 324 GLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQ 383
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK EA LL +M P +I+ LC E ++ +A L++R+ + P +
Sbjct: 384 CKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSS 443
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++IH CKE I +A L E + P+++T++TLI G C+ + A L+ +
Sbjct: 444 VTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFE 503
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M KG+ P+V TY LI K N KE +R+ +ML+ G PN +F+ L++G ++ G
Sbjct: 504 MTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 563
Query: 480 EGEVGKVV----SMATASGSVESDSWNFL-----------------LTRIVSDLDSGAGA 518
+ AT V+ W ++ +R SD+ SG
Sbjct: 564 LSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVT 623
Query: 519 LD 520
D
Sbjct: 624 PD 625
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 183/346 (52%), Gaps = 2/346 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+LN LV+ +R+D V + ++ + +VP+V ++L + K+ ++LDEM S+
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISR-GLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSL 262
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ PN+ +T + +E A+++F + G VP+ TY+ ++DGY K G L A
Sbjct: 263 GVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQA 322
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ E+ + PN V +G +++ FCK ++ AR+L M++ P+ + +I
Sbjct: 323 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHG 382
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
C+ G + +A L + N PD + +I+ LC E ++ EA +LF + I PS
Sbjct: 383 QCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPS 442
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+TYN+LI G C+ + +A L +M GVEPN+ T++ LI G+CK+ N K + +
Sbjct: 443 SVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYF 502
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
EM KG P+ +++ LI+ ++ N E ++ S +G +D
Sbjct: 503 EMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPND 548
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 148/310 (47%), Gaps = 9/310 (2%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
KF V PN++ N LI CK ++ A+ +L EM S+ + P++ T+T ++ G +
Sbjct: 366 KFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLA 425
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A R+F + + P + TY L+ G+ K + A+ + EM +GVEPN +T+ +I
Sbjct: 426 EANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLI 485
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ +CK + A L +M + VP +ID +E +++A L+ +L
Sbjct: 486 DGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIH 545
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLT---------YNTLIAGMCESA 408
P++ + ++ KEG++ +A + E + + + + LI G+C++
Sbjct: 546 PNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNG 605
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ A R + DM GV P++++Y +++ + + + + +M+ G PN
Sbjct: 606 YILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQ 665
Query: 469 LLIEGLYESG 478
LL E+G
Sbjct: 666 LLAMFYQENG 675
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 165/405 (40%), Gaps = 68/405 (16%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG--ENLFI--TVIRNYGLAGRPEL 132
N + +++ +AR A SL + +K G NL++ +I +G
Sbjct: 337 NVVVFGTLVDGFCKARELVAARSLFVHM-----VKFGVDPNLYVYNCLIHGQCKSGNMLE 391
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +E N+ V + L+N L +R + +F+ +++ ++ P+ T N LI
Sbjct: 392 AMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNE-RIFPSSVTYNSLI 450
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK+ ++E A+ + EM S G+ PN++T +T++ GY +I+ A ++ ++ +G V
Sbjct: 451 HGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIV 510
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM---------------- 296
PD TYT L+D + K + +A+++ +M + G+ PN+ T+ +
Sbjct: 511 PDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDF 570
Query: 297 ---------------------------IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
IE C+ A DM P
Sbjct: 571 YLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYV 630
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
++ E ++ D L +++ +P+ ++ + + + G + A L + G
Sbjct: 631 SMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACFLTNSSRLG 690
Query: 390 --------SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
SI + ++ + G+C S+ ++ MV+ +E
Sbjct: 691 TIFKNTCNSIFLITVFHCKMYGICISS-------IYKTMVQNNIE 728
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 224/497 (45%), Gaps = 63/497 (12%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P +K + P + S+ + ALQ F Y PNF HN D+Y S++ + +
Sbjct: 57 PSLKSLLPAITPSHVSSLFSLNLDPHTALQ-FSYWISQTPNFKHNVDSYASLLTLIDHHK 115
Query: 93 AFDAVESLLTELKQNPEIKC----GENLFIT-VIRNYGLAGRPELAVKTF----LRIEKF 143
V ++ + IKC + LF++ + R +L++K + + +F
Sbjct: 116 IVSDVPKIIVSM-----IKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARF 170
Query: 144 NVQRSVRSLNT-LLNALVQNKRYDL-------VHLMFKNSRHKFK-------VVPNVFTC 188
+ + L T +L V Y + F +F + P+ FT
Sbjct: 171 GLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTS 230
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMV------------------------------- 217
I C+ DV+ A RV +EMP+ V
Sbjct: 231 TSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCY 290
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN+ T+T ++ G + R ++ A + ++L+R VPD TY L+ G + G L A ++
Sbjct: 291 PNVYTYTALIKG-LCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRL 349
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+ M++ G+ P++ TYG I+ CK + EAR L D + + + + +ID C+
Sbjct: 350 LSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCK 409
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
GKV++A L++++L KNC P+ + +IH LC G + EA LFD+ + G P++ T
Sbjct: 410 VGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYT 469
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+N LI M + + +A + M+ G +P TYN I+ +C G +E ++ +M
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMK 529
Query: 457 DKGCFPNKTSFSLLIEG 473
++G P+ +++ LI+
Sbjct: 530 EEGVPPDDFTYTSLIKA 546
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 44/329 (13%)
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G ++ +++ ++L+ D T+ ++++ Y K+G + +A + M +M G+ P+ T
Sbjct: 171 GLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTS 230
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
I +C+ K A + ++M R V + L I LCE G++++A L+ R+
Sbjct: 231 TSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQL----IHGLCEAGRIDEAVSLFVRMKD 286
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAG--------- 403
C P+ + +I LC++ + +A L DE ER +P L+TYN+LIAG
Sbjct: 287 DCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDS 345
Query: 404 --------------------------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+C+S + EA RL+D + E+GV NV Y++LI
Sbjct: 346 AYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLID 405
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G+CK+G E + E+ML K C PN +F+ LI GL +GN E + G
Sbjct: 406 GYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKP 465
Query: 498 S-DSWNFLLTRIV--SDLDSGAGALDELL 523
+ ++N L+ R++ D D L +++
Sbjct: 466 TVYTFNILIGRMLKQGDFDDAHKCLQKMM 494
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 191/422 (45%), Gaps = 36/422 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL-------AGRPEL 132
TY+S+I RA D+ LL+ +K E + R YG + R E
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMK--------ERGLVPDQRTYGCFIDFLCKSNRVEE 380
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + F + + V +V + L++ + + D +F+ K PN +T N LI
Sbjct: 381 ARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK-NCSPNAYTFNALI 439
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC +++ A+ + D+M MG+ P + T ++G + +GD ++A + ++ G
Sbjct: 440 HGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEK 499
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P A TY ++ Y G++ +A +M +M++ GV P++ TY +I+A+ K + A ++
Sbjct: 500 PVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDV 559
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M PS +I L ++ + ++ K+ + + S
Sbjct: 560 LKSMFDADCEPSHHTFLSLIKQLFDK----------RYVVEKS--GETGVESVSNFGDVP 607
Query: 373 EGKIWEAKK------LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+W+ + LF+E E+ G P Y LI+G+C+ L A +L D M ++G+
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+ +N +I CK+ E I+E+M+ G P LI GLYE G E E G
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEG-ETERGN 726
Query: 486 VV 487
V
Sbjct: 727 SV 728
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 206/489 (42%), Gaps = 46/489 (9%)
Query: 42 LYPKRLVSMIF-----RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
L P S F R +++D A ++F PN N +Y+ +IH L A D
Sbjct: 223 LSPDYFTSTSFILGYCRSKDVDSAFRVFEEM----PN--RNEVSYNQLIHGLCEAGRIDE 276
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRP-ELAVKTFLRIEKFNVQRSVRSLNTL 155
SL +K + C N++ GL + A+ + + N+ + + N+L
Sbjct: 277 AVSLFVRMKDDC---CYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSL 333
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ + D + + + + +VP+ T I LCK + VE A R+ D + G
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKER-GLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ N++ ++ ++ GY G ++ A +F +L + P+A T+ L+ G G L +A+
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ D+M G++P T+ ++I K +A L M+ P + I++
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVY 512
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSL 394
C GKV++A ++ ++ + PD+ +++I K G + A + F+ PS
Sbjct: 513 CSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSH 572
Query: 395 LTYNTLIAGMCESAELTEAG-----------------------------RLWDDMVEKGV 425
T+ +LI + + + E L+++M + G
Sbjct: 573 HTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGC 632
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
P+ Y LI G CK+ N +++L++M +G P++ F+ +I + GE
Sbjct: 633 TPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAAN 692
Query: 486 VVSMATASG 494
+V SG
Sbjct: 693 IVEDMICSG 701
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 169/401 (42%), Gaps = 38/401 (9%)
Query: 8 KITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYA 67
K+ CL + + CS + T L+ + NL AL +F
Sbjct: 412 KVDEAGCLFEKMLSKNCSPNAYTFNA-------------LIHGLCSAGNLKEALSLFDQM 458
Query: 68 GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE--NLFITVIRNYG 125
K T++ +I ++ + FD L ++ + E N FI V Y
Sbjct: 459 VKM--GLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEV---YC 513
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL----VQNKRYDLVHLMFKNSRHKFKV 181
AG+ + A +++++ V + +L+ A + +D++ MF
Sbjct: 514 SAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD-----C 568
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG-DIENAK 240
P+ T LIK L K R + E V ++ + G +W+ + +
Sbjct: 569 EPSHHTFLSLIKQLFDK-------RYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVI 621
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F ++ G PD+ Y L+ G K+ L A+K++D+M+ G+ P+E+ + +I
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK +K GEA N+++DM+ + P C +I L EEG+ E ++K+L D
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTL 400
+I + K+G + E +LF+E E+ G S TY+ L
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
++ ++ F +EK + L++ + + + + L + K + P+ N
Sbjct: 618 DIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIA-LKLLDQMQKEGISPSEMVFNA 676
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I CK A ++++M G P L T++ G G+ E VF + G
Sbjct: 677 VISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCG 736
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+ D + +L+DG +K G + + ++ +EME NG + TY ++ +
Sbjct: 737 YNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQ 784
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 194/408 (47%), Gaps = 60/408 (14%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E A + FL++ KF V RS N LL+ L + R DL FK+ + +VFT NI
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAA-GIKRSVFTYNI 61
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LCK+ D+E A + +M G P++VT+ +++ G+ G ++ +F + D
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK------ 304
PD TY L++ + K R+ A + + EM+ NG++PN VTY I+AFCK
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 305 --------------------------KSG---EARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+G EA L++++LQ + ++D L
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
CEEG++++A E+++ +L P+ + ++H K ++ AK + E + I P L
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE- 453
L Y T++ G+C + L EA L ++ E G+ N Y L+ + K G A E + +LE
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361
Query: 454 ----------------------EMLDKGCFPNKTSFSLLIEGLYESGN 479
EMLDKG P+K +++ LI+G + GN
Sbjct: 362 MLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 225/480 (46%), Gaps = 49/480 (10%)
Query: 41 RLYPK-----RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
R++PK L+ + + DL+ + F G + TY+ +I L + +
Sbjct: 16 RVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGA--AGIKRSVFTYNIMIDYLCKEGDLE 73
Query: 96 AVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
SL T++K+ P+I + ++I +G G + + F +++ + V +
Sbjct: 74 MARSLFTQMKEAGFTPDIVT----YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 129
Query: 153 NTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
N L+N + +R ++ +H M N + PNV T + I A CK+ ++ AI+
Sbjct: 130 NALINCFCKFERMPKAFEFLHEMKANG-----LKPNVVTYSTFIDAFCKEGMLQEAIKFF 184
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+M + + PN T+T+++ G++ A ++ +IL G + TYT L+DG +
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR+ +A +V M + GV PN+ TY ++ F K K+ A+++L +M ++ P L
Sbjct: 245 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 304
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST----------------------- 365
++ LC E ++E+A +L ++++ + NA+ T
Sbjct: 305 GTILWGLCNESRLEEA-KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 363
Query: 366 -IIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ LCK AKKLFDE ++G +P + Y LI G + L EA L D M+E
Sbjct: 364 DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI 423
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G+E ++ Y LI G G ++ +L+EM+ KG P++ + LI+ Y G E
Sbjct: 424 GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEA 483
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 2/272 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A F + P + L+ K+GR + K +M G++ + TY +
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
MI+ CK AR+L M + + P +ID + G +++ +++++ +
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
C PD + +I+ CK ++ +A + E + G P+++TY+T I C+ L EA
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ + DM + PN FTY LI CK GN E ++++EE+L G N +++ L++GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Query: 475 YESGNEGEVGKVV-SMATASGSVESDSWNFLL 505
E G E +V +M A + +++ L+
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 273
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 28/315 (8%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I +A L+ E+ Q IK + ++ GR + A +
Sbjct: 195 NEFTYTSLIDANCKAGNLAEALKLVEEILQ-AGIKLNVVTYTALLDGLCEEGRMKEAEEV 253
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V + + L++ ++ K + + K + K + P++ ++ LC
Sbjct: 254 FRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLLLYGTILWGLC 312
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--------------------- 235
+ +E A ++ E+ G+ N V +TT++ Y G
Sbjct: 313 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKN 372
Query: 236 --IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
E AK++F ++LD+G +PD YT L+DG +K G L +A+ + D M + G+E + Y
Sbjct: 373 NCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAY 432
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I + +ARNLLD+M+ + +P + +I GKV++A EL + +
Sbjct: 433 TALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAK 492
Query: 354 KNC---MPDNAISST 365
+ + D+A+ S
Sbjct: 493 RGMITGLSDHAVPSV 507
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 200/412 (48%), Gaps = 17/412 (4%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPEL 132
+ N T+ I+ L R D S + N KC LF + GL A + E
Sbjct: 160 TSNGATHGVILSALCARRDLDKAVSYFNSVSPN---KCEPTLFTYTVLVDGLCKAHKVER 216
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTC 188
A F + + + + + ++L++ L + R D LV LM P
Sbjct: 217 ACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPP-----PTAVAY 271
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
++ LCK ++ A++ + EM + P + T++ I+ GY+ G +E A V ++ D
Sbjct: 272 TSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMAD 331
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R PD +YT+ ++ +GR +A KV + M + G +P+ TYG++I+ FCK
Sbjct: 332 RDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAA 391
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A ++L M + P+ + ++D + ++E+A EL++R+L+ +P +T+I+
Sbjct: 392 ATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVIN 451
Query: 369 WLCKEGKIWEAKKLFDEFERGS---IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
LCK K+ EA +L E +R PS++TY+ +I G+ + A L +M++ GV
Sbjct: 452 ALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV 511
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
P+ FTY LIQ G + +LEEML G FP+ ++ L++ L S
Sbjct: 512 IPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 563
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 228/506 (45%), Gaps = 50/506 (9%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
AL +H+A P FSH T +S++ L R P + F
Sbjct: 79 ALGFYHWAAT-RPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSS----FNI 133
Query: 120 VIRNYGLAGRPEL-AVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
++R G A R + V LR ++ + + + +L+AL + D F NS
Sbjct: 134 LLR--GFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYF-NSVS 190
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K P +FT +L+ LCK VE A V +EM G P+++ +++++ G G ++
Sbjct: 191 PNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVD 250
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK--------------------- 276
A+++ ++ RG P A YT ++ G K GR+ +AVK
Sbjct: 251 EARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIV 310
Query: 277 --------------VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
VM+EM D P+ ++Y + IEA + EA + + M+++
Sbjct: 311 TGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCK 370
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +ID C+EG + A + + + + P+ I + I+ K ++ EA +L
Sbjct: 371 PDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 430
Query: 383 FDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNMLIQGF 439
+ + G +PS +TYNT+I +C+ ++ EA L +M + +EP++ TY+M+I G
Sbjct: 431 YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 490
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
K+G + +L EM+D G P+ +++ LI+ L +G +++ +G D
Sbjct: 491 GKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDD 550
Query: 500 SWNFLLTRIV--SDLDSGAGALDELL 523
L +I+ SD+D+ L E++
Sbjct: 551 HTYGTLVQILCRSDVDAAWDLLQEMM 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 189/421 (44%), Gaps = 14/421 (3%)
Query: 25 SLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSI 84
++S P K P LV + + ++ A +F + + Y S+
Sbjct: 182 AVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEM--IRKGYKPDIIAYSSL 239
Query: 85 IHKLARARAFDAVESL--LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK 142
I L++A D L L + P + +++ GR + AVKT + +
Sbjct: 240 IDGLSKAGRVDEARKLVDLMVARGPPPTAVA---YTSIVAGLCKCGRIQEAVKTIQEMRR 296
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
++ V + + ++ + + + + + + P+ + + I+AL E
Sbjct: 297 RRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADR-DCAPDTISYTMFIEALYSIGRRE 355
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVL 261
A +V + M G P++ T+ I+ + G + A V ++D+ V P+ YT++
Sbjct: 356 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL-RLMDKAAVKPNRYIYTMI 414
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK- 320
MDG++K RL +A+++ + +G+ P+ VTY +I A CK KK EA LL +M +RK
Sbjct: 415 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE 474
Query: 321 -YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
PS +I L + G E A +L ++ +PD +++I L GK+ A
Sbjct: 475 ELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRA 534
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E + I P TY TL+ +C S ++ A L +M+ G PN FT+ + +G
Sbjct: 535 MELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKG 593
Query: 439 F 439
F
Sbjct: 594 F 594
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 211/446 (47%), Gaps = 10/446 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P ++ +L+S + R D A + H G + ++++ L RAR F +
Sbjct: 267 FPNSIWLTQLISRLCRSGRTDRAWDVLH--GLMKLGGVMEAASCNALLTALGRAREFKRM 324
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-----FNVQRSVRSL 152
+LL E+K+ +I+ F +I + R + A++ F ++ F V+ V +
Sbjct: 325 NTLLAEMKE-MDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY 383
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NTL++ L + R + + + R + + +PN T N LI CK +E A + D+M
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G+ PN+VT T++ G G I A F ++ +G +A TYT L+ + + +
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A+++ DEM + G P+ + Y +I + K A +L M + + P +I
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
+ C + K+++A E+ K + PD +T+I K G A +L + + G +
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+++TY LI C + L EA +++ DM V PN YN+LI C+ +
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALS 683
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYE 476
++++M KG PN +F+ + +GL E
Sbjct: 684 LMDDMKVKGVKPNTNTFNAMFKGLQE 709
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 248/536 (46%), Gaps = 22/536 (4%)
Query: 9 ITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKR--LVSMIFRQQNLDLALQIFHY 66
+ A + L++ G A+ + V + P +RL R L+ ++FR+ +D AL +
Sbjct: 159 VNAATLLIRCFGRAQMVDESFLVYNELCP-SRRLTHIRNILIDVLFRKGRVDDALHLLDE 217
Query: 67 AGKFHPNFSHNYDTYHSIIHKLAR----ARAFDAVE--SLLTELKQNPEIKCGENLFITV 120
+ F N +T H + L++ RA D E L+++ ++ E+ +
Sbjct: 218 MLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEH-EVFPNSIWLTQL 276
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK 180
I +GR + A + K S N LL AL + + + ++ + + +
Sbjct: 277 ISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMK-EMD 335
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEM---PSMGMV--PNLVTHTTILGGYVWRGD 235
+ PNV T ILI LCK V+ A+ V ++M S G + P+++T+ T++ G G
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395
Query: 236 IENAKRVFGDILDRG-WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
E + + + +P+ TY L+DGY K + A ++ D+M +GV PN VT
Sbjct: 396 QEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ CK + A ++M + ++ +I C +E A EL+ +L
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
C PD + T+I L + GK+ A + + E G P ++++N LI G C +L EA
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA 575
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ +M G++P+ TYN LI F K G+ R++++M+ +G P ++ LI
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 474 LYESGNEGEVGKVVSMATASGSVESDS--WNFLLTRIV--SDLDSGAGALDELLVK 525
+GN E K+ +++ V ++ +N L+ + + +D +D++ VK
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVK 691
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
FS + +++ +I+ R D +L E+ +N IK + T+I ++ G A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEM-ENAGIKPDGVTYNTLISHFSKTGDFSTA 610
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ ++ K + +V + L++A N D +F++ KV PN NILI
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+LC+K+ V+ A+ ++D+M G+ PN T + G + + A + + + P
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNP 730
Query: 254 DATTYTVLMDGYIKLG 269
D T +L + +G
Sbjct: 731 DYITMEILTEWLSAVG 746
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 222/448 (49%), Gaps = 8/448 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY + I +AR FDA + + E+++ + E + +I +G E A
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRR-DCAMNEVTYNVMISGLCRSGAVEEAFGFKEE 303
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + + L+N L + R + L+ + S K PN+ L+ K+
Sbjct: 304 MVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK--PNIVVYGTLVDGFMKE 361
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
A +L EM S G+ PN + + ++ G G + A ++ +++ G PD TY
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
LM G+ + A ++++EM ++G+ PN +YG+MI C+ +S EA NLL++M+
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS 481
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P++ + +I +EG + ACE +++ + N PD +++I L G++ E
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A++ + + + RG +P TY+ LI G C++ L +A +L M+ G++PN TY L++
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV- 496
G+ K + ++ IL+ ML G P+ + ++I L S N V++ +G V
Sbjct: 602 GYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 661
Query: 497 ESDSWNFLLTRI--VSDLDSGAGALDEL 522
+ ++ L++ + ++D++ G LDE+
Sbjct: 662 DLHIYSSLISGLCKIADMEKAVGLLDEM 689
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 210/451 (46%), Gaps = 31/451 (6%)
Query: 39 PQRLYPKRLVSMIF--RQQNL--DLALQIFHYAGKFHPNFSH-NYDTYHSIIHKLARARA 93
P RL P + S+IF R +L L L F+++ P + + D + + L A
Sbjct: 74 PSRLSPDAVSSLIFGGRSHSLHPKLLLDFFYWS---RPRIAPPSADAFARLAASLCAASL 130
Query: 94 FDAVESLLTEL----KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
F LL ++ P + I + + P AV L ++ + SV
Sbjct: 131 FPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVL-VDTYKKTGSV 189
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
R+ ++ LM + + P CN L+K L + D +E ++
Sbjct: 190 RNAAQVV-------------LMMAD----LGLAPTRRCCNGLLKDLLRADAMELLWKLKG 232
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M G++P++ T++T + + D + AK+VF ++ R + TY V++ G + G
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ +A +EM D G+ P+ TYG ++ CKG + EA+ LLD+M P+ +
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER- 388
++D +EGK +A ++ K ++ P+ + +I LCK G++ A KL E +
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKV 412
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P TYN L+ G + + A L ++M G+ PNV++Y ++I G C+ G +KE
Sbjct: 413 GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEA 472
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+LEEM+ +G PN ++ LI G + GN
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGN 503
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 213/462 (46%), Gaps = 8/462 (1%)
Query: 52 FRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
F+Q + D A ++ + + N +Y +I+ L + +LL E+ +K
Sbjct: 429 FQQHDKDGAFELLNEMR--NSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISE-GLK 485
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
++ +I + G LA + ++ K NV + N+L+ L R +
Sbjct: 486 PNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEY 545
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+ + K +VP+ FT + LI CK ++E A ++L +M + G+ PN T+T +L GY
Sbjct: 546 YAQVQ-KRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
D E + +L G PD Y +++ + + A V+ E+E NG+ P+
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y +I CK +A LLD+M + P +ID C G + A ++ +
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAEL 410
L K +P+ + +I CK G I +A L+ E +RG P YN L G ++A+L
Sbjct: 725 LAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADL 784
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A L ++M +G NV +N L+ GFCK G +E ++L M+D+ PN + +
Sbjct: 785 EQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKV 843
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVES--DSWNFLLTRIVS 510
+ ++G GE +V + + +S D ++ L T +++
Sbjct: 844 VSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMIN 885
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 215/509 (42%), Gaps = 74/509 (14%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
+SH +I +++ F + SLL L ++ K L+ +I Y + + +
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTS-SSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSS 113
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + N LL +V + ++ F S K KVV +V++ I+IK
Sbjct: 114 IYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES--KIKVVLDVYSFGIVIK 171
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ ++E + +L E+ G PN+V +TT++ G +G+IE AK +F ++ G V
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231
Query: 254 DATTYTVLMDGYIKL-----------------------------------GRLTDAVKVM 278
+ TYTVL+ G K GR DA KV
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVF 291
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
DEM + GV N VTY +I C+ K+ EA ++D M P+ +ID C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSV 351
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER---------- 388
GK+ A L + L + P + ++ C++G A K+ E E
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 389 --------------------------GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
G +P + TY+ LI G C ++ EA RL+ MVE
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
K +EPN YN +I G+CK G++ +R+ +M +K PN S+S LI L + E
Sbjct: 472 KMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKE 531
Query: 483 VGKVVSMATASGSVESDSWNFLLTRIVSD 511
+V SG SD+ L++R +D
Sbjct: 532 AEDLVEKMIDSGIDPSDTICNLISRAKTD 560
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 190/376 (50%), Gaps = 9/376 (2%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
+++ DL +++ + FS N Y ++I + + + L E+ + +
Sbjct: 180 EKSFDLLVELREFG------FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLV-AN 232
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
E + +I G + + + ++++ V ++ + N ++N L ++ R +F
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFD 292
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
R + V N+ T N LI LC++ A +V+D+M S + PNL+T+ T++ G+
Sbjct: 293 EMRER-GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSV 351
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G + A + D+ RG P TY VL+ G+ + G + A K++ EME+ G++P++VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++I+ F + A L M + VP +I C +G++ +A L+K ++
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTE 412
K P+ I +T+I CKEG + A +LF + E + P++ +Y+ LI +C+ +L E
Sbjct: 472 KMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKE 531
Query: 413 AGRLWDDMVEKGVEPN 428
A L + M++ G++P+
Sbjct: 532 AEDLVEKMIDSGIDPS 547
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 166/348 (47%), Gaps = 17/348 (4%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKL----ARARAFDAVESLLTELKQNP 108
++ ++ A +F GKF N TY +IH L + + F+ E +
Sbjct: 210 KKGEIEKAKDLFFEMGKF--GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-------Q 260
Query: 109 EIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
E NL+ V+ GR + A K F + + V ++ + NTL+ L + + +
Sbjct: 261 EHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKAN 320
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ + + + + PN+ T N LI C + A+ + ++ S G+ P+LVT+ +
Sbjct: 321 EANKVMDQMK-SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVL 379
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G+ +GD A ++ ++ +RG P TYT+L+D + + + A+++ ME+ G+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGL 439
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ TY V+I FC + EA L M+++ P+ + +I C+EG A
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALR 499
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
L++ + K P+ A S +I LCKE K+ EA+ L ++ + G PS
Sbjct: 500 LFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 194/401 (48%), Gaps = 44/401 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +IIH L R +ESLL E+K+ +P ++ ++ TVI Y L
Sbjct: 348 TYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQ----IYNTVI--YALCK-------- 393
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
RS +LN +V + R+D P+V T N LI A C
Sbjct: 394 ---------CRSASQALAVLNQMVAS-RFD----------------PDVVTFNTLIAAFC 427
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ DVE A+++L E + PN +++T ++ G+ RG++ A + +++ RG PD
Sbjct: 428 REGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVV 487
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T L+ G + G++ +A+ V ++M + V P+ Y V+I CK + A+NLL +M
Sbjct: 488 TLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEM 547
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L++K P + +ID K+ DA ++++ + K D + +I CK G +
Sbjct: 548 LEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMM 607
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA + G IP TY TLI G + ++ A R DM+++ +PN+ TY L
Sbjct: 608 NEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASL 667
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
I G+C IGN + M +G FPN +++LI L++
Sbjct: 668 ICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFK 708
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 153/312 (49%), Gaps = 8/312 (2%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
TC ++++ LC + VE R+++ G VP V + ++ GY RGD+ + G++
Sbjct: 279 TC-VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEM 337
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD---EMEDNGVEPNEVTYGVMIEAFCKG 303
+G +P TY ++ LGR +D K+ EM++ G+ PN Y +I A CK
Sbjct: 338 EMKGIMPTVVTYGAIIHW---LGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKC 394
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ + +A +L+ M+ ++ P +I C EG VE+A +L + +R+ P+
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSY 454
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +IH C G++ A L E RG P ++T LI G+ S ++ EA + + M E
Sbjct: 455 TPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE 514
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ V P+ YN+LI G CK +L EML++ P+K ++ LI+G S +
Sbjct: 515 RQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSD 574
Query: 483 VGKVVSMATASG 494
K+ G
Sbjct: 575 ARKIFEFMEEKG 586
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 1/303 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP N+LI C++ DV + +L EM G++P +VT+ I+ + D+ +
Sbjct: 308 VPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIES 367
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ +RG P+ Y ++ K + A+ V+++M + +P+ VT+ +I AFC
Sbjct: 368 LLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFC 427
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ EA LL + ++R+ P+ +I C G+V A +L ++ + PD
Sbjct: 428 REGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVV 487
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+IH L G++ EA + ++ ER +P YN LI+G+C+ L+ A L +M
Sbjct: 488 TLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEM 547
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+E+ V+P+ F Y LI GF + + +I E M +KG + + +++ +I+G +SG
Sbjct: 548 LEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMM 607
Query: 481 GEV 483
E
Sbjct: 608 NEA 610
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 194/434 (44%), Gaps = 26/434 (5%)
Query: 67 AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL 126
A +F P+ T++++I R + LL E + E++ + + +I +G
Sbjct: 409 ASRFDPDVV----TFNTLIAAFCREGDVEEALKLLREAIRR-ELEPNQLSYTPLI--HGF 461
Query: 127 AGRPELAVKTFLRIEKFNVQRS--VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN 184
R E+ V + L +E + V +L L++ LV + + D LM + + +V+P+
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEA-LMVREKMAERQVMPD 520
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
N+LI LCKK + A +L EM + P+ +TT++ G++ + +A+++F
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFE 580
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ ++G D Y ++ GY K G + +AV M M G P+E TY +I+ + K
Sbjct: 581 FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
A L DM++R+ P+ +I C G + A L+ + + P+ +
Sbjct: 641 DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYT 700
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGM-----------CESAELTE 412
+I L K+ K +A F+ P+ T + L+ G+ C +
Sbjct: 701 VLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAH 760
Query: 413 AGR----LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
++ ++ G++P + YN +I C+ + + + E+M +KGC P+ +F
Sbjct: 761 KKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFL 820
Query: 469 LLIEGLYESGNEGE 482
L+ G G G+
Sbjct: 821 SLLYGFSSVGKSGK 834
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 130/344 (37%), Gaps = 90/344 (26%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+ + Y+ +I L + R A ++LL E+ + +++ + ++ T+I + + + A K
Sbjct: 520 DANIYNVLISGLCKKRMLSAAKNLLVEMLEQ-KVQPDKFVYTTLIDGFIRSDKLSDARKI 578
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E+ R + + N ++ ++ + +M +S K +P+ FT LI
Sbjct: 579 FEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEA-VMCMSSMRKVGCIPDEFTYTTLIDGYA 637
Query: 197 KKDDVEGAIRVL-----------------------------------DEMPSMGMVPNLV 221
KK D++ A+R L M S G+ PN+V
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVV 697
Query: 222 THTTILGG------------------------------YVWRG--------------DIE 237
+T ++G Y+ G D +
Sbjct: 698 HYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTD 757
Query: 238 NAKR------VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
A + VF ++ G P + Y ++ + L A+++ ++M + G P+ V
Sbjct: 758 QAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPV 817
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
T+ ++ F KSG+ R+ L + Q+ + CK + LL
Sbjct: 818 TFLSLLYGFSSVGKSGKWRSALPNEFQQDEF---EIICKYMTLL 858
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 202/418 (48%), Gaps = 4/418 (0%)
Query: 87 KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQ 146
K++R R V S L+ P I L AV +F R+
Sbjct: 32 KMSRCRCEKIVNSWLSLFPPYPPIATA-TLHSQSHSQPHSHHHHHHAVASFNRMLLMRPP 90
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ +L++LV+NK Y V +FK + V PN+ T NILI C + A
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSN-GVTPNLCTLNILINCFCHLAHITFAFS 149
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
V + G P+ +T T++ G + G+I+ A ++ +G+ D +Y L++G
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K G +++ ++E + V+P+ V Y +I CK K+ G+A +L +M+ + P+
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF 269
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I C G +++A L + KN PD + +I L KEGKI EA LF+E
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329
Query: 387 E-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+ + P+++TY +LI G+C++ L A L M E+G++P+V++Y +L+ CK G
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 389
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+ + + +L KG N +++++I GL ++G G+V + S G + D+ F
Sbjct: 390 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCM-PDAITF 446
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y ++I+ L +A AV LL +L+ + +K ++ T+I R A +
Sbjct: 200 SYGTLINGLCKAGETKAVARLLRKLEGH-SVKPDVVMYTTIIHCLCKNKRVGDACDLYSE 258
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + +V + NTL+ + + K + P+V+T NILI AL K+
Sbjct: 259 MIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLK-NINPDVYTFNILIDALGKEG 317
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI + +EM M PN+VT+T+++ G +E A + + ++G PD +YT
Sbjct: 318 KIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYT 377
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+D K GRL +A + + G N TY VMI CK G+ +L M +
Sbjct: 378 ILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGK 437
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+P + +I L E+ + + A + + ++ +
Sbjct: 438 GCMPDAITFKTIICALFEKDENDKAEKFLREMIAR 472
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 217/427 (50%), Gaps = 20/427 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ D +++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLXKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSA 440
Query: 467 FSLLIEG 473
+ L++
Sbjct: 441 YISLVQS 447
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 135/299 (45%), Gaps = 2/299 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I+ L + + A +L +MP G+ + ++ Y G ++ + ++F + + G
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+Y L ++ GR A + ++M G+EP T+ VMI F K A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+DM R+ P +I+ K+E+A + + + +N P +T+I
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
++ + +L +E + I P+ +TY+TL+ G+C + +++EA + +M++K + P
Sbjct: 231 VSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD 290
Query: 430 FTYNM-LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ M LI CK GN +L+ M+ + LIE ++G + K++
Sbjct: 291 NSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLL 349
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 44/312 (14%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N TH I+ + +A+ + D+ +G D + +++D Y K G + ++VK+
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMF 103
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME+ GVE +Y + + + + M+ ++Y
Sbjct: 104 QKMEELGVERTIKSYNALFKVILRRGRY---------MMAKRY----------------- 137
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+ ++L + P + +I GK+ A + F++ + I P ++TY
Sbjct: 138 ---------FNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTY 188
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I G ++ EA + + +M + +EP V TY LI+G+ + + +R++EEM
Sbjct: 189 NTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKG 248
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------D 511
G PN ++S L+ GL + E ++ +D N + R++S +
Sbjct: 249 FGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTD--NSIFMRLISSHCKSGN 306
Query: 512 LDSGAGALDELL 523
LD+ A L ++
Sbjct: 307 LDAAADVLKAMI 318
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 202/417 (48%), Gaps = 32/417 (7%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+HN +Y +I L R+R +A N ++ + G A +
Sbjct: 216 FTHNEQSYFLMIEILGRSRNLNA----------------ARNFVFSIEKKSGGAE----S 255
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+K F +++ V SV + N+LL+ +++ R + +F + V P+ +T NILI+
Sbjct: 256 IKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIR 315
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG--W 251
C V+ EM P++VT+ T++ G G ++ A V ++ +
Sbjct: 316 GFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNL 375
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TYT L+ GY + +A+ ++ EM G++PN++TY +I+ C+ +K + +
Sbjct: 376 SPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKE 435
Query: 312 LLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L+ M+ ++P + +I C GK+E+A +++++ PD+A S ++ L
Sbjct: 436 ILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSL 495
Query: 371 CKEGKIWEAKKLFDEFERGSI--------PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
C+ G A++ FDE I P + YN + +C + + +A R++ +++
Sbjct: 496 CQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMK 555
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+G + + +Y LI G C+ G + G +L ML + P+ ++ L+I+GL + G+
Sbjct: 556 RGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGD 611
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 180/410 (43%), Gaps = 65/410 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY++++ L RA +++ + K++P + + T+IR Y + A+
Sbjct: 344 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLA 403
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ ++ + + NTL+ L + ++ D + + + +P+ T N LIKA C
Sbjct: 404 EMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTM 463
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI---------------------- 236
+E A V ++M + + P+ T++ ++ RGD
Sbjct: 464 GKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGC 523
Query: 237 --------------------ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+ A+RVF ++ RG D +Y L+ G+ + G
Sbjct: 524 KPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFD 582
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
++ M P+ TYG+MI+ K A L+ ML+ ++P++A+ ++ L
Sbjct: 583 LLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALV 642
Query: 337 E-EGKVEDACELWK---RLLRKNCMPDNAISST--------------IIHWLCKEGKIWE 378
E E ++ +L RLL K+ + D A + ++ +LC+ K+ E
Sbjct: 643 EKERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLE 702
Query: 379 AKK--LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
A+K LF +R S+ + +T+I+G+C++ +++EA L+ ++VEKG++
Sbjct: 703 AQKMLLFSLEKRQSV-DIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQ 751
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 20/240 (8%)
Query: 281 MEDNGVEPNEVTYGVMIE--------------AFCKGKKSGEARNL--LDDMLQRKYVPS 324
+E G NE +Y +MIE F KKSG A ++ M + PS
Sbjct: 211 VEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIGVSPS 270
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++ ++ + G+ A +L+ +L PD + +I C + E F
Sbjct: 271 VVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFF 330
Query: 384 DEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNMLIQGFC 440
E R P ++TYNTL+ G+C + ++ A + MV+K + PNV TY LI+G+C
Sbjct: 331 KEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYC 390
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+ E + +L EM+ +G PNK +++ LI+GL E+ ++ +++ G D+
Sbjct: 391 MKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDT 450
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 153/378 (40%), Gaps = 40/378 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI-------TVIRNYGLAGR 129
N TY+++I L A+ D ++ +L E G+ FI T+I+ + G+
Sbjct: 413 NKITYNTLIQGLCEAQKLDKIKEIL-------EGMVGDGGFIPDTCTLNTLIKAHCTMGK 465
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR------HKFKVVP 183
E A F ++ + VQ + + L+ +L Q + F H P
Sbjct: 466 LEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKP 525
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
V N + + LC + A RV ++ G + ++ T++ G+ G E +
Sbjct: 526 LVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLL 584
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+L R +VPDA TY +++DG +K G A K +++M + P + ++ A +
Sbjct: 585 VLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 644
Query: 304 KK---------SGEARNLLDDMLQRKYVPSSALCCK---------VIDLLCEEGKVEDAC 345
++ + R L LQ K + L + ++ LC+ K+ +A
Sbjct: 645 ERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQ 704
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
++ L K D + ST+I LCK K+ EA L+ E E+G L L +
Sbjct: 705 KMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISL 764
Query: 405 CESAELTEAGRLWDDMVE 422
L EA + M E
Sbjct: 765 EAEGRLNEAKFVSKKMPE 782
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 196/390 (50%), Gaps = 6/390 (1%)
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+A+ F R+ + V + + N L+N L++N D ++F N K +PN + N L
Sbjct: 383 MAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF-NMMGKHGCLPNTSSYNEL 441
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I+ C D E A+ +L M P LVT+ I+ GY GD + A RV + G
Sbjct: 442 IRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGC 501
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD +YT L+ G+ K+ ++ A + +EM D G+ PNEVTY +I +CK +K A
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+L+ M + P+ +I L ++ A EL K +L + PD ST+I+ LC
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
G I A ++F++ + G +P+L TY++LI + + + EA ++ ++ ++G+ P+
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY +I+ G L EM++ GC P ++ +LI+GL NE K+V++
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQ---NEMVYHKLVALP 738
Query: 491 TASGSVESDSWNFLLTRIVSDLDSGAGALD 520
A+ + D + ++S L S LD
Sbjct: 739 NAASTSTFDD-QIINKDVISVLSSKLAELD 767
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 214/439 (48%), Gaps = 19/439 (4%)
Query: 48 VSMIF---RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
SMI R ++LD A +IF+ + N TY ++I+ L + + ++E+
Sbjct: 267 TSMILGYCRNRDLDSAFEIFNRMDE--EGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL-V 160
++ P + + F I GR E A K F+ ++K + +V + +L++ V
Sbjct: 325 TRHGVLPTV----HTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRV 380
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
L H M ++ VVPN T N L+ L + +++ A+ V + M G +PN
Sbjct: 381 SRMAIGLFHRMSRDG-----VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNT 435
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
++ ++ GY GD E A + ++L P TY +++ GY G A++V++
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M+ NG +P+E +Y +I FCK K A + ++M+ R P+ +I C++ K
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNT 399
++ A + +R+ R C P+ + +IH L K+ A++L E P ++TY+T
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYST 615
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+I G+C + + A +++ MV+ G PN+ TY+ LIQ + G +E + E+ +G
Sbjct: 616 VINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675
Query: 460 CFPNKTSFSLLIEGLYESG 478
P++ ++ +IE SG
Sbjct: 676 LIPDEVTYVKMIEVCVMSG 694
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 177/344 (51%), Gaps = 9/344 (2%)
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
+FT L+ L K + + ++ G+ PNL+ + +++ G++ +A+ +
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ G PD TYT ++ GY + L A ++ + M++ G EPN TY +I C
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSG 312
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA + + +M + +P+ I LC+ G++EDA +++ + +K C P+ +
Sbjct: 313 RVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYT 372
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++I + A LF R G +P+ +TYN L+ + E+ E+ A +++ M +
Sbjct: 373 SLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKH 429
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G PN +YN LI+G+C IG+ ++ + +L ML P +++++I+G +SG+
Sbjct: 430 GCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVA 489
Query: 484 GKVVSMATASGSVESDSWNF--LLTRI--VSDLDSGAGALDELL 523
+V+ + A+G + D W++ L++ +S ++ +G +E++
Sbjct: 490 IRVLELMKANG-CQPDEWSYTELISGFCKISKMELASGMFNEMM 532
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 161/324 (49%), Gaps = 33/324 (10%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN+ N +I ALCK +V A +++++ GM P+ T+T+++ GY D+++A +
Sbjct: 226 PNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEI 285
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC- 301
F + + G P+A TY+ L++G GR+ +A+ + EM +GV P T+ I A C
Sbjct: 286 FNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCD 345
Query: 302 ----------------KGKK----------SGE-----ARNLLDDMLQRKYVPSSALCCK 330
KG K SG+ A L M + VP++
Sbjct: 346 MGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNA 405
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG- 389
++++L E +++ A ++ + + C+P+ + + +I C G +A + +G
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGR 465
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+L+TYN +I G C+S + A R+ + M G +P+ ++Y LI GFCKI +
Sbjct: 466 PTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELAS 525
Query: 450 RILEEMLDKGCFPNKTSFSLLIEG 473
+ EM+D+G PN+ +++ LI G
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISG 549
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/501 (20%), Positives = 206/501 (41%), Gaps = 68/501 (13%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDA 96
P + L++++ +D AL +F+ GK PN S +Y+ +I +
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTS----SYNELIRGYCTIGDTEK 453
Query: 97 VESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
S+LT LK P + +I+ Y +G ++A++ ++ Q S L
Sbjct: 454 AMSMLTNMLKGRPTPTLVT--YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTEL 511
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ + + +L MF N + PN T LI CK + ++ A R+L+ M G
Sbjct: 512 ISGFCKISKMELASGMF-NEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG 570
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
PN+ T+ ++ G + + A+ + +L+ PD TY+ +++G G + A+
Sbjct: 571 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLAL 630
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++ ++M +G PN TY +I+A + + EA + ++ ++ +P K+I++
Sbjct: 631 EMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVC 690
Query: 336 CEEGKVEDACELWKRLLRKNCMPD------------------------NAISST------ 365
GKV+ A + ++ C P NA S++
Sbjct: 691 VMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQI 750
Query: 366 ---------------------------IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
++ L + G+ +EA L+ + P+ TY
Sbjct: 751 INKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTY 810
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+ + + ++ A ++ M ++ E ++ Y LI C++ KE + E+ML
Sbjct: 811 KHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLS 870
Query: 458 KGCFPNKTSFSLLIEGLYESG 478
+ ++ +++LI GL +G
Sbjct: 871 RALNADEIVWTILINGLLGAG 891
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+T A+ +D G + TY ++ K + + +L+ P+ +
Sbjct: 172 AEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIY 231
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
VI+ LC++G V DA + ++ + PD +++I C+ + A ++F+ E
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P+ TY+TLI G+C S + EA +M GV P V T+ I C +G ++
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEG 473
+I +M KGC PN +++ LI G
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISG 377
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 225/456 (49%), Gaps = 24/456 (5%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E+L++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDLWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG AG + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKA--LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ P T N++I LC K VE A R ++M + P+++T+ T++ GY IE
Sbjct: 145 GIEPTRHTFNVMIWGFFLCGK--VETANRFFEDMKXREISPDVITYNTMINGYYRVKKIE 202
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A++ F ++ R P TYT L+ GY+ + R+ DA+ +++EM+ G++PN +TY ++
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEMKGFGIKPNAITYSTLL 262
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
C +K EA +L +M+ + P +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 263 PGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAGNLDAAADVLKAMIRLSV 322
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMC 405
+ +I CK G +A KL D+ I PS YN L+ +C
Sbjct: 323 PTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDIVLRPQSSLHMEPS--AYNPLVEYLC 380
Query: 406 ESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
+ + +A L +++ GV+ P N LI+G + G+ +L+ ML + K
Sbjct: 381 NNGQTAKAETLVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKIDSEK 438
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+S+ L++ + + + +G + S
Sbjct: 439 SSYDSLVQSYLKKSEPADAKAALDSMIENGHLPDSS 474
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 198/418 (47%), Gaps = 47/418 (11%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAF-------DAVESLLTELKQNPEIKCGENLFITVI 121
KFHP F +T+ IH + + F DAV L+QNP
Sbjct: 21 KFHP-FQFPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPT------------ 67
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
P++ +L +LV++K Y V +F+ ++ +
Sbjct: 68 -------PPDM------------------EFGQILGSLVKSKHYHTVLSLFQKMEYR-GI 101
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PN NILI C+ + A VL ++ MG P+ +T T + G+ +G I A
Sbjct: 102 KPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALN 161
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
++ G+ D +Y L++G K+G A++++ ++ V+ + V Y +I++ C
Sbjct: 162 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K K +A +L +M+ R+ + +I C GK++DA L+ ++ +N PD
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281
Query: 362 ISSTIIHWLCKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ ++ CKEG++ EAK L ++G P ++TYN+L+ G C E+ A + + M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+GV V +YN++I GFCKI + +++ +EM K FPN +++ LI+GL +SG
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSG 399
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 192/393 (48%), Gaps = 14/393 (3%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKN 174
T+I G A++ R++ VQ V +T+++++ ++K +DL M
Sbjct: 180 TLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV-- 237
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
SR ++ N+ T + LI C ++ AI + ++M S + P++ T ++ + G
Sbjct: 238 SR---RISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEG 294
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ AK ++ +G PD TY LMDGY + + A +++ M GV +Y
Sbjct: 295 RVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYN 354
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I FCK K +A L +M ++ P+ +ID LC+ G++ A EL + +
Sbjct: 355 IVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDR 414
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
PD S+I+ LCK + +A L + ++G P++ TY LI G+C+ L +A
Sbjct: 415 GQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+++D++ KG V TY ++IQGFC G E + +L +M D C P+ ++ ++I
Sbjct: 475 RNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICS 534
Query: 474 LYESGNEGEVGKVVSMATASG----SVESDSWN 502
L++ + K++ G +E SW+
Sbjct: 535 LFDKDENDKAEKLLREMITRGLLYSFLEYGSWS 567
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 186/415 (44%), Gaps = 55/415 (13%)
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
+T NP++ F ++ + GR + A + K ++ + + N+L++
Sbjct: 271 MTSENINPDVYT----FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
++ + H+ V V + NI+I CK V+ A+++ EM + PN+
Sbjct: 327 LVNEVNMAKSILNTMSHR-GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNV 385
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+T+ +++ G G I A + + DRG PD TY+ ++D K + A+ ++ +
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIK 445
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
++D G+ PN TY ++I+ CKG + +ARN+ +D+L + Y + +I C G
Sbjct: 446 LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL 505
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYN- 398
++A L ++ +C+PD II L + + +A+KL E RG + S L Y
Sbjct: 506 FDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGS 565
Query: 399 ---TLIAG----------MCESAELTEAG--------RLWDD-------MVEKGVE-PNV 429
+ +A C S++ E+G R++ D M +K VE P+V
Sbjct: 566 WSLSFMAAPAHFLNNDSLQCTSSQ--ESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSV 623
Query: 430 F-----------------TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
TY ++IQGFC G E + +L +M GC P+ ++
Sbjct: 624 IIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 152/310 (49%), Gaps = 4/310 (1%)
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+DV A+ + + + P + ILG V +F + RG P+ +
Sbjct: 49 NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L++ + +LG + A V+ ++ G EP+ +T I+ FC + +A N D ++
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ +I+ LC+ G+ A EL +R+ K D + STII +CK+ + +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228
Query: 379 AKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L+ E I S ++TY+ LI+G C +L +A L++ M + + P+V+T+N+L+
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV--SMATASGS 495
FCK G KE L M+ +G P+ +++ L++G Y NE + K + +M+ +
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDG-YCLVNEVNMAKSILNTMSHRGVT 347
Query: 496 VESDSWNFLL 505
S+N ++
Sbjct: 348 ATVRSYNIVI 357
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 149/362 (41%), Gaps = 49/362 (13%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+++ Y L +A + V +VRS N ++N + K D +FK HK
Sbjct: 320 SLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK 379
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
++ PNV T N LI LCK + A+ ++D M G P+++T+++IL ++
Sbjct: 380 -QIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDK 438
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A + + D+G P+ TYT+L+DG K GRL DA + +++ G TY VMI+
Sbjct: 439 AIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQ 498
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FC EA +LL M +P + +I L ++ + + A +L + ++ + +
Sbjct: 499 GFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLY 558
Query: 359 DN--------AISSTIIHWL---------CKEGKIWEAKKLFDEF--------------- 386
+ + H+L +E W AK L +
Sbjct: 559 SFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNW-AKLLLERIYCDCVLTKSNMRDKD 617
Query: 387 ---------------ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++G I + TY +I G C E+ L M G P+ T
Sbjct: 618 VECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVT 677
Query: 432 YN 433
Y+
Sbjct: 678 YD 679
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 174/343 (50%), Gaps = 5/343 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ + LL ++ + K Y V ++K F + N +T NILI + C + + A V
Sbjct: 9 SIVDFSKLLTSITRMKHYSTVLSLYKQ-MDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L ++ +G P+ T TT++ G G I A ++F + G+ PD TY L++G K
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+LT+A+ + +M G+ PN TY +I C EA L M+ RK +P
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 328 CCKVIDLLCEEGKVE---DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
++D LC+EG ++ A L++ + ++ +PD +T+IH LC G++ +A LF
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E G IP L+TY L +C++ L EA L + ++P++ Y++++ G C+ G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ + ++ KG P+ +++++I GL + G E K+
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 350
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 161/316 (50%), Gaps = 4/316 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ + L+ ++ + + + +M S G+ N T ++ + + A V
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
GDIL G+ P T+T L+ G G++ +A+++ D+M G +P+ +TYG +I CK
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
++ EA +L DML + P++ +I LC G ++A L+ ++ + MPD
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 363 SSTIIHWLCKEGKIW---EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+T++ LCKEG I +A LF+E ++G IP +TYNTLI G+C L +A L+
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+MV G P++ TY +L CK E + +L+ + P+ +S++++G+ +G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307
Query: 479 NEGEVGKVVSMATASG 494
+ S ++ G
Sbjct: 308 ELEAARDLFSKLSSKG 323
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 15/371 (4%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR-- 92
++P P + +L++ I R ++ L ++ F HN T + +I+
Sbjct: 4 MRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSF--GIPHNTYTLNILINSFCHLNRL 61
Query: 93 --AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
AF + +L +L P F T+IR + G+ A++ F ++ Q V
Sbjct: 62 GFAFSVLGDIL-KLGYQPSTAT----FTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVL 116
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ TL+N L ++++ +F + K + PN FT + LI LC + AIR+
Sbjct: 117 TYGTLINGLCKDRQLTEALSLFSDMLAK-GISPNNFTYSSLIHGLCILGHWKEAIRLFYA 175
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIE---NAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
M ++P+ +T T++ G I+ A +F ++ +G +PD TY L+ G
Sbjct: 176 MIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 235
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+GRL DA+ + EM G P+ VTY ++ + CK + EA LL + P +
Sbjct: 236 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 295
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
V+D +C G++E A +L+ +L K PD + +I+ LC++G + EA KLF E +
Sbjct: 296 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355
Query: 388 RGSIPSLLTYN 398
I S T++
Sbjct: 356 ENDIESYSTFS 366
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 183/347 (52%), Gaps = 7/347 (2%)
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+R+++F +R + +T++N L + N+ + L+ K +R+ P+ T +++ LC
Sbjct: 71 MRLKRF--KRKAIAYSTIINWLCKLNRVEEARELIEKMARY---APPDALTYGPIVERLC 125
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A+ ++EM + G+ P+ + +L G +E A+ +F ++ + P+
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L++G K R+ A ++ EM G P EV+Y +I+ FCK K A+++ D M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ VP+ +ID L + GKV+ A E+ +++K P+ A S +I CK ++
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA KL ++ +G P+++TYN L+ +C + +L +A +L+ M ++ P V TYN L
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
++ C R+ EM+ KGC P+ ++ L GL +G E
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHE 412
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 178/342 (52%), Gaps = 5/342 (1%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
ILI LCK + + A ++L M + ++TI+ +E A+ + + + R
Sbjct: 50 ILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELI-EKMAR 108
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
PDA TY +++ K R+ DA+ ++EM G++P+ Y ++ C+ +K EA
Sbjct: 109 YAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 168
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
R L + M++++ P+ +I+ LC+ ++E A EL+K + K +P +T+I
Sbjct: 169 RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 228
Query: 370 LCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
CK+ + AK +FD+ R + +P+++TY TLI G+ +S ++ A + D MV+KGV PN
Sbjct: 229 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 288
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV- 487
V TY+ LI GFCK+ E ++LE+M+ +G P ++++L+ L + + K+
Sbjct: 289 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 348
Query: 488 SMATASGSVESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
MA ++N LL + LD E++ K C
Sbjct: 349 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 390
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 147/269 (54%), Gaps = 2/269 (0%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N +L+ L Q ++ + L+F+ K ++ PNV T N LI LCK +E A + EM
Sbjct: 153 NFVLSGLCQEEKVEEARLLFEKM-VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMA 211
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G VP V++ T++ G+ + D+ AK VF ++ VP+ TYT L+DG K G++
Sbjct: 212 GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQ 271
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A +V+D M GV PN TY +I+ FCK ++ EA LL+ M+ + P+ ++
Sbjct: 272 AAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILL 331
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
+ LC K+EDA +L++ + ++ C P +T++ LC ++ A +L+ E +G
Sbjct: 332 NSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCP 391
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
P +TY+TL G+ + ++ EA L + M
Sbjct: 392 PDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 152/278 (54%), Gaps = 5/278 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY--VWRGDIEN 238
+ P+ F N ++ LC+++ VE A + ++M + PN+VT+ T++ G WR IE
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR--IET 202
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F ++ +G+VP +Y L+DG+ K L A V D+M + PN VTY +I+
Sbjct: 203 AYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLID 262
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K K A +LD M+++ P+ A +ID C+ +V++A +L ++++ + P
Sbjct: 263 GLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAP 322
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +++ LC+ K+ +A KLF +R P+++TYNTL+ +C +L A RL+
Sbjct: 323 TVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLY 382
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+M+ KG P+ TY+ L G + G E ++E+M
Sbjct: 383 AEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 146/281 (51%), Gaps = 4/281 (1%)
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
++P T T+ G+ G +E K V+ +++ G+ A+ Y +L+ K+G +A
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC-KVIDL 334
K++ M + + Y +I CK + EAR L++ M +Y P AL +++
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA--RYAPPDALTYGPIVER 123
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
LC+ +++DA + + + PD I + ++ LC+E K+ EA+ LF++ + I P+
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYNTLI G+C++ + A L+ +M KG P +YN LI GFCK + + +
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+M+ C PN +++ LI+GL +SG +V+ G
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I+ +L + + D + + E+ IK ++ V+ + E A F +
Sbjct: 116 TYGPIVERLCKTKRIDDALATVEEMATRG-IKPDAFIYNFVLSGLCQEEKVEEARLLFEK 174
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K + +V + NTL+N L + R + + +FK K VP + N LI CKK
Sbjct: 175 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGFCKKK 233
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A V D+M VPN+VT+TT++ G G ++ A V ++ +G P+ TY+
Sbjct: 234 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYS 293
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG+ K+ R+ +A K++++M G+ P VTY +++ + C+ K +A L M QR
Sbjct: 294 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P+ ++ LC +++ A L+ ++ K C PD T+ L + GK+ EA
Sbjct: 354 RCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEA 413
Query: 380 KKLFDEFE 387
++L ++ +
Sbjct: 414 QELMEKMK 421
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 40/283 (14%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R +P A T+ + DG+ K GRL +V M + G YG++I CK E
Sbjct: 4 RRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDE 63
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STII 367
A LL M KR RK AI+ STII
Sbjct: 64 AYKLLHTMR------------------------------LKRFKRK------AIAYSTII 87
Query: 368 HWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+WLCK ++ EA++L ++ R + P LTY ++ +C++ + +A ++M +G++P
Sbjct: 88 NWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKP 147
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ F YN ++ G C+ +E + E+M+ + PN +++ LI GL ++ ++
Sbjct: 148 DAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELF 207
Query: 488 SMATASGSVESD-SWNFLLTRIV--SDLDSGAGALDELLVKNC 527
G V ++ S+N L+ DL + D+++ NC
Sbjct: 208 KEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+++I+ L +A + L E+ + E + T+I + A
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT-EVSYNTLIDGFCKKKDLVAAKDV 241
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + N +V + TL++ L ++ + + K V PNV T + LI C
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GVTPNVATYSCLIDGFC 300
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V+ A ++L++M + G+ P +VT+ +L +E+A ++F + R P
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ +L A ++ EM G P+ +TY + + K EA+ L++ M
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Query: 317 LQRKYVP 323
K P
Sbjct: 421 KLTKRNP 427
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 210/413 (50%), Gaps = 24/413 (5%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N + TY+S+++ L R D + + E+K + +N + I GL + L
Sbjct: 198 NLQVSIATYNSLLYNL---RHTDIMWDVYNEIKAS---GVPQNEYTNPILIDGLCRQSRL 251
Query: 133 A-VKTFLRI---EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
TFLR E+F SV S N L++ + D+ F K+ ++P+V++
Sbjct: 252 QDAVTFLRETGGEEFG--PSVVSFNALMSGFCKMGSVDVAKSFF-CMMIKYGLLPDVYSY 308
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NIL+ LC +E A+ ++M + G+ P++VT+ + G+ G I A +V +L
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL 368
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G PD TYT+L+ G+ ++G + ++ K+ ++M G++ + VTY V++ + CK + E
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLC-EEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL +M P DLL G VE+A EL++ + K P++ + S II
Sbjct: 429 AVILLHEMEVIGLKP---------DLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAII 479
Query: 368 HWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L ++G I EA+ FD + + ++ YN +I G + + EA R + ++EKG+
Sbjct: 480 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 539
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
P + T+N LI GFCK G E +++L+ + G P +++ L+ G E G+
Sbjct: 540 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 592
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 171/336 (50%), Gaps = 16/336 (4%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV---PNVFTCNILIKALCKKDDVEGA 204
S+ + LL++L ++ R D ++ H+ +V+ P++ T + + VE A
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILL----HEMEVIGLKPDLLTYS--------RGAVEEA 456
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
I + +EM S + PN + I+ G +G I A+ F + + Y +++DG
Sbjct: 457 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 516
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y KLG + +AV+ ++ + G+ P VT+ +I FCK K EA LLD + VP+
Sbjct: 517 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 576
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
S +++ CEEG + ++ + K P + ++ LCKEG++ E+ +L
Sbjct: 577 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 636
Query: 385 E-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ RG P +TYNT+I C++ +L +A +L + M++ ++P+ TYN+LI G C G
Sbjct: 637 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 696
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
N K+ R+L + D+ K +++ +I+ G+
Sbjct: 697 NLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGD 732
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 186/395 (47%), Gaps = 34/395 (8%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ +++ N+Q S+ + N+LL N R+ + N V N +T ILI
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLL----YNLRHTDIMWDVYNEIKASGVPQNEYTNPILI 242
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC++ ++ A+ L E P++V+ ++ G+ G ++ AK F ++ G +
Sbjct: 243 DGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLL 302
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF-CKGKKSGEARN 311
PD +Y +L+ G G + +A++ ++ME++GVEP+ VTY ++ F G SG A
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISG-AWK 361
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
++ ML P +I C+ G +E++ +L +++L + + ++ LC
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421
Query: 372 KEGKIWEAKKLFDEFER-GSIPSLLTYN---------------------------TLIAG 403
K G+I EA L E E G P LLTY+ +I+G
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISG 481
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ E ++EA +D + + V + YN++I G+ K+GN E +R +++++KG P
Sbjct: 482 LFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 541
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+F+ LI G + G E K++ G V +
Sbjct: 542 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 576
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 150/296 (50%), Gaps = 1/296 (0%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
++ PN F C+ +I L +K + A D + + ++ + ++ GY G+I A
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
R + I+++G P T+ L+ G+ K G+L +AVK++D ++ +G+ P VTY ++
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 586
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+C+ ++L +M + P+ V+ LC+EG++ ++ +L K + + PD
Sbjct: 587 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 646
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWD 418
+T+I CK + +A +L ++ + S+ PS +TYN LI G+C L +A RL
Sbjct: 647 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLV 706
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++ + Y +I+ C G+ + + +M+++G + +S +I L
Sbjct: 707 TLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRL 762
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 153/325 (47%), Gaps = 1/325 (0%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
M+ +S K V + NI+I K ++ A+R ++ G+ P +VT +++ G+
Sbjct: 493 MYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGF 552
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
+G + A ++ I G VP + TYT LM+GY + G + ++ EME ++P +
Sbjct: 553 CKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQ 612
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY V+++ CK + E+ LL M R P VI C+ ++ A +L +
Sbjct: 613 ITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 672
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAE 409
+L+ + P + +I+ LC G + +A +L + SI + + Y T+I C +
Sbjct: 673 MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGD 732
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A + MVE+G E ++ Y+ +I CK + ML G P++ +
Sbjct: 733 VQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLV 792
Query: 470 LIEGLYESGNEGEVGKVVSMATASG 494
++ + SG+ V ++ +M G
Sbjct: 793 MLNAFHRSGDPNSVFEIFAMMIKCG 817
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 1/283 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P + T N LI CKK + A+++LD + G+VP VT+TT++ GY GD+ +
Sbjct: 538 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 597
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ + P TYTV++ G K GRL ++V+++ M G+ P+++TY +I++F
Sbjct: 598 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 657
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK +A L + MLQ PS +I+ LC G ++DA L L ++
Sbjct: 658 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 717
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+TII C +G + A F + ERG S+ Y+ +I +C+ +T+A +
Sbjct: 718 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 777
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
M+ G+ P+ +++ F + G+ I M+ G P
Sbjct: 778 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 24/249 (9%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG----------VMIE 298
R W + + +L Y + + DA+ V+ +M+ ++ + TY +M +
Sbjct: 162 RDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD 221
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + K SG +N + + +ID LC + +++DA + + P
Sbjct: 222 VYNEIKASGVPQNEYTNPI-------------LIDGLCRQSRLQDAVTFLRETGGEEFGP 268
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ ++ CK G + AK F + G +P + +YN L+ G+C + + EA
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+DM GVEP++ TYN+L GF +G ++++ ML G P+ ++++LI G +
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388
Query: 478 GNEGEVGKV 486
GN E K+
Sbjct: 389 GNIEESFKL 397
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 194/380 (51%), Gaps = 4/380 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I G A+K +I+ + +V +T+++AL + + + +F
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 474
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + +V T + LI C ++ AI +L+EM + P++ T+T ++ G +
Sbjct: 475 VK-GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKV 533
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ AK V +L PD TY LM+GY+ + + A V + M GV P+ TY ++
Sbjct: 534 KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 593
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK K EA NL +M Q+ VP + ++D LC+ G++ +L + R
Sbjct: 594 INGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM-RDRG 652
Query: 357 MPDNAIS-STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
P + I+ +++I LCK G + +A LF++ ++G P+ T+ L+ G+C+ L +A
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 712
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ D++ KG +V+ YN++I G CK G +E + +L +M + GC PN +F ++I L
Sbjct: 713 EVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Query: 475 YESGNEGEVGKVVSMATASG 494
++ + K++ A G
Sbjct: 773 FKKDENDKAEKLLRQMIARG 792
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 203/438 (46%), Gaps = 45/438 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE--LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+Y+ +I+ + + D +L E L + P I F ++ ++ AV
Sbjct: 275 SYNIMINGFCKIKRVDKALNLFKEMILSRFPPII----QFNKILDSFAKMKHYSTAVSLS 330
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDL-VHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+E +Q + +LN L+N + ++ K + + P+ T N LIK LC
Sbjct: 331 HRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP--PSTVTLNTLIKGLC 388
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V+ A+ D++ + G N V++ T++ G GD A ++ I R P+
Sbjct: 389 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE 448
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y+ ++D K +++A + EM G+ + VTY +I FC K EA LL++M
Sbjct: 449 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEM 508
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD----------------- 359
+ + P ++D L +EGKV++A + +L+ PD
Sbjct: 509 VLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEV 568
Query: 360 -------NAIS-----------STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
NA+S + +I+ CK + EA LF E ++ +P +TY++L
Sbjct: 569 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSL 628
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G+C+S ++ L D+M ++G +V TYN LI G CK G+ + I + +M D+G
Sbjct: 629 VDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688
Query: 461 FPNKTSFSLLIEGLYESG 478
PN +F++L++GL + G
Sbjct: 689 RPNTFTFTILLDGLCKGG 706
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 195/413 (47%), Gaps = 6/413 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I G A+K +I+ + +V NT+++AL + + + +F
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + NV T + LI C ++ A+ +L+ M + PN+ T+ ++ G +
Sbjct: 161 VK-GISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ AK V +L + TY+ LMDGY + + A V + M GV P+ +Y +M
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIM 279
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK K+ +A NL +M+ ++ P K++D + A L RL K
Sbjct: 280 INGFCKIKRVDKALNLFKEMILSRFPPIIQFN-KILDSFAKMKHYSTAVSLSHRLELKGI 338
Query: 357 MPDNAISSTIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD + +I+ C G+I + L +RG PS +T NTLI G+C ++ +A
Sbjct: 339 QPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 398
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
D ++ +G + N +Y LI G CKIG+ + I++L ++ + PN +S +I+ L
Sbjct: 399 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 458
Query: 476 ESGNEGEVGKVVSMATASG-SVESDSWNFLLTR--IVSDLDSGAGALDELLVK 525
+ E + S T G S + +++ L+ IV L G L+E+++K
Sbjct: 459 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLK 511
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 37/333 (11%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N LIK LC K V+ A+ D++ + G N V++ T++ G GD A +
Sbjct: 61 PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
I R P+ Y ++D K +++A + EM G+ N VTY +I FC
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K EA LL+ M+ + P+ ++D LC+EGKV++A + +L K C+ N I
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVML-KACVKSNVI 239
Query: 363 S-STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ ST++ ++ +A+ +F+ G P + +YN +I G C+ + +A L+ +M
Sbjct: 240 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299
Query: 421 VE----------------------------------KGVEPNVFTYNMLIQGFCKIGNAK 446
+ KG++P++FT N+LI FC +G
Sbjct: 300 ILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQIT 359
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G +L ++L +G P+ + + LI+GL G
Sbjct: 360 FGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 392
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 176/354 (49%), Gaps = 11/354 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N + Y +II L + + L +E+ I + T+I + + G+ + A+
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCIVGKLKEAIGL 504
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + VR+ L++AL + + ++ +M K V P+VFT N L+
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKAC-----VKPDVFTYNTLM 559
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+V+ A V + M MG+ P++ T+T ++ G+ ++ A +F ++ + V
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV 619
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY+ L+DG K GR++ ++DEM D G + +TY +I+ CK +A L
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ M + P++ ++D LC+ G+++DA E+++ LL K D I + +I+ CK
Sbjct: 680 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCK 739
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+G + EA + + E G IP+ +T++ +I + + E +A +L M+ +G+
Sbjct: 740 QGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 132/254 (51%), Gaps = 1/254 (0%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
++ VL ++ G P+ VT T++ G +G ++ A +L +G+ + +Y L++
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G ++G A+K + +++ +PN Y +I+A CK + EA L +M +
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ +I C GK+++A L ++ K P+ + ++ LCKEGK+ EAK +
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226
Query: 384 DEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ + S ++TY+TL+ G E+ +A +++ M GV P+V +YN++I GFCKI
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286
Query: 443 GNAKEGIRILEEML 456
+ + + +EM+
Sbjct: 287 KRVDKALNLFKEMI 300
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 100/180 (55%), Gaps = 1/180 (0%)
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
++L +L+R Y P + +I LC +G+V++A +LL + + +T+I+ +
Sbjct: 49 SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G A K + + R + P++ YNT+I +C+ ++EA L+ +M KG+ NV
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TY+ LI GFC +G KE + +L M+ K PN ++++L++ L + G E V+++
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+RG P +T NTLI G+C ++ EA D ++ +G + N +Y LI G C+IG+
Sbjct: 55 LKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDT 114
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFL 504
+ I+ L ++ + PN ++ +I+ L + E + S T G S +++ L
Sbjct: 115 RAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTL 174
Query: 505 LTR--IVSDLDSGAGALDELLVK 525
+ IV L G L+ +++K
Sbjct: 175 IYGFCIVGKLKEALGLLNVMVLK 197
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 190/371 (51%), Gaps = 4/371 (1%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + F V S N+L+ LV D+ +F + + P+ FT N+L+ A+ K
Sbjct: 824 KFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMK-ELGCGPDEFTYNLLLDAMGKS 882
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E ++V +EM G VT+ TI+ G V +E A ++ +++ +G+ P TY
Sbjct: 883 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 942
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+DG +K GR+ DA + +EM + G + N Y +++ + + +L DM+
Sbjct: 943 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 1002
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +ID LC+ G++ D +++LL PD + +I L K ++ E
Sbjct: 1003 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1062
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A LF+E + +G +P+L TYN+LI + ++ + EAG+++++++ KG +PNVFTYN LI+
Sbjct: 1063 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1122
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL-IEGLYESGNEGEVGKVVSMATASGSV 496
G+ G+ M+ GC PN ++ + + + G+ +V+ A G +
Sbjct: 1123 GYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDSYEIIVTFINAEGML 1182
Query: 497 E-SDSWNFLLT 506
S +W F ++
Sbjct: 1183 AYSRAWKFCIS 1193
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 163/332 (49%), Gaps = 37/332 (11%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ F C LIK LCK+ A ++ + S G+ ++ +++ G V I+ A+ +F
Sbjct: 799 DFFLCP-LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLF 857
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ + G PD TY +L+D K R+ + +KV +EM G E VTY +I K
Sbjct: 858 AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 917
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA------------------- 344
++ +A +L +++ + + P+ ++D L + G++EDA
Sbjct: 918 RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 977
Query: 345 ----------------CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FE 387
C L++ ++ + PD + II LCK G++ + F + E
Sbjct: 978 NILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 1037
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P L+TYN LI G+ +S L EA L+++M +KG+ PN++TYN LI K G A E
Sbjct: 1038 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1097
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++ EE+L KG PN +++ LI G SG+
Sbjct: 1098 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1129
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 167/340 (49%), Gaps = 2/340 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
SVR+ + L+ A + + + V + + V PNV++ I I+ L + + A R+
Sbjct: 273 SVRTYSVLMVAFGKRRDVETVLWLLRE-MEAHGVKPNVYSYTICIRVLGQARRFDEAYRI 331
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L EM + G P+++THT ++ G I +AK VF + PD TY L+D +
Sbjct: 332 LAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFAD 391
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G +++ + M+ +G N V Y +I+A C+ + EA + D+M Q+ VP
Sbjct: 392 NGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I + + DA EL+K + P+ I++ K G+ +A + ++ +
Sbjct: 452 YNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 511
Query: 388 -RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G +P ++ N ++ G+ +S L A R++ ++ GV P+ TY M+I+ K
Sbjct: 512 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 571
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
E ++I +M++ C P+ + LI+ LY++G E ++
Sbjct: 572 EAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQI 611
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 211/477 (44%), Gaps = 41/477 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ +I L A + + ++K++ + K +IT++ + G + ++ +
Sbjct: 346 THTVLIQVLCDAGRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFADNGESQSVMEIWNA 404
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ +V + +++AL Q R MF + K +VP ++ N LI K D
Sbjct: 405 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSYNSLISGFLKAD 463
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+ + M G PN TH + Y G+ A + + + +G VPD
Sbjct: 464 RFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 523
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ G K GRL A +V E++ GV P+ +TY +MI+ K K EA + DM++
Sbjct: 524 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 583
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP + +ID L + G+ ++A +++ +L N P + +T++ L +EGK+ E
Sbjct: 584 NCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 643
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L +E + P+L+TYNT++ +C++ + +A + M KG P++ +YN +I G
Sbjct: 644 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 703
Query: 439 ----------------------------------FCKIGNAKEGIRILEE-MLDKGCFPN 463
F KIG KE + I++E L G +
Sbjct: 704 LVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTD 763
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALD 520
++S L+EG+ + + + + +SG D F L ++ L AL+
Sbjct: 764 RSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDD---FFLCPLIKHLCKQKKALE 817
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 175/353 (49%), Gaps = 8/353 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+V N +T N L+ L K A+ V M G+VP++ T++ ++ + R D+E
Sbjct: 235 IVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 294
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ G P+ +YT+ + + R +A +++ EME+ G +P+ +T+ V+I+
Sbjct: 295 WLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVL 354
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C + +A+++ M + P ++D + G+ + E+W ++ + DN
Sbjct: 355 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWN-AMKADGYNDN 413
Query: 361 AISST-IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
++ T +I LC+ G+++EA ++FDE ++G +P +YN+LI+G ++ +A L+
Sbjct: 414 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 473
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M G +PN +T+ + I + K G + + I+ E M KG P+ + + ++ GL +SG
Sbjct: 474 YMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 533
Query: 479 NEGEVGKVVSMATASGSVESDSWNFLLT----RIVSDLDSGAGALDELLVKNC 527
G +V A G V D+ + + S D +++ NC
Sbjct: 534 RLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 585
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 214/466 (45%), Gaps = 22/466 (4%)
Query: 74 FSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGR 129
++ N Y ++I L + R F+A+E + E+KQ PE + + ++I + A R
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGIVPE----QYSYNSLISGFLKADR 464
Query: 130 PELAVKTFLRIE----KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
A++ F ++ K N V +N + K LM +VP+V
Sbjct: 465 FGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG-----IVPDV 519
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
N ++ L K + A RV E+ +MG+ P+ +T+T ++ + A ++F D
Sbjct: 520 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 579
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+++ VPD L+D K GR +A ++ ++++ +EP + TY ++ + K
Sbjct: 580 MIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGK 639
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
E +LL++M Y P+ ++D LC+ G V DA ++ + K C+PD + +T
Sbjct: 640 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNT 699
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD-MVEKG 424
+I+ L KE + EA +F + ++ IP T T++ + + EA + + ++ G
Sbjct: 700 VIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPG 759
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ + + + L++G K ++ I E + G + LI+ L + E
Sbjct: 760 SKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 819
Query: 485 KVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
++V + G S+++ S+N L+ +V + +D G E+ C
Sbjct: 820 ELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGC 865
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 142/313 (45%), Gaps = 1/313 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F+++ + +VV +CN ++ + V V D M + N+ T I GG
Sbjct: 156 FRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 215
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G + +A + + G V +A TY L+ +K G +A++V M +GV P+
Sbjct: 216 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVR 275
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY V++ AF K + LL +M P+ I +L + + ++A + +
Sbjct: 276 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEM 335
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAEL 410
+ C PD + +I LC G+I +AK +F + ++ P +TY TL+ ++ E
Sbjct: 336 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGES 395
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+W+ M G NV Y +I C++G E + + +EM KG P + S++ L
Sbjct: 396 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 455
Query: 471 IEGLYESGNEGEV 483
I G ++ G+
Sbjct: 456 ISGFLKADRFGDA 468
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 44/367 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRNYGLAGRPELAVKTF 137
+Y+S+I L D E L E+K E+ CG + F ++ G + R E +K
Sbjct: 836 SYNSLICGLVDENLIDIAEGLFAEMK---ELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 892
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + + + NT+++ LV+++R + + L + F P + L+ L
Sbjct: 893 EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY--GPLLDGLL 950
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +E A + +EM G N + +L G+ G+ E +F D++D+G PD
Sbjct: 951 KAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIK 1010
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+YT+++D K G+L D + ++ + G+EP+ +TY ++I+ K K+ EA +L ++M
Sbjct: 1011 SYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM 1070
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ VP+ +I L + GK +A ++++ LL K
Sbjct: 1071 QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG--------------------- 1109
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM-- 434
W+ P++ TYN LI G S A + M+ G PN T ++
Sbjct: 1110 WK-------------PNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHE 1156
Query: 435 LIQGFCK 441
L++ F K
Sbjct: 1157 LMKTFLK 1163
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ V ++A C ++DL+ + G+V D E++ + R+ + + I L EG + A
Sbjct: 164 RVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSA 223
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
E G + + TYN L+ + +S EA ++ M+ GV P+V TY++L+
Sbjct: 224 PVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVA 283
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
F K + + + +L EM G PN S+++ I L ++ E ++++
Sbjct: 284 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILA 333
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 221/434 (50%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HB +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHBRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 86 MIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P N+LI VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++ +EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR++L +M+ + P+ +++ ++I C G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAAKAETLVRQLLKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKRNE 453
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 18/427 (4%)
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
+SII +L + + D ES++ ++ + +LF + GL A+ R+
Sbjct: 249 NSIIKELCKMKEMDKAESIVQKMVDS---GIAPDLFTYSLIIDGLCKSK--AMDKAERVL 303
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKAL 195
+ V+ R + N+L+ + M+ S FK V+P V CN I AL
Sbjct: 304 EQMVEAGTRPNSITYNSLIHGYS---ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 360
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--IENAKRVFGDILDRGWVP 253
K A + D M G P++++++T+L GY D + + +F +L +G P
Sbjct: 361 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 420
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + +L++ Y + G + A+ + ++M++ G+ P+ VT+ +I + C+ + +A +
Sbjct: 421 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 480
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA-ISSTIIHWLCK 372
+ M+ PS A+ +I C G++ A EL ++ K+ P S+II+ LCK
Sbjct: 481 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 540
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG++ E K + D + G P+++T+N+L+ G C + EA L D M G+EPN +
Sbjct: 541 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 600
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y L+ G+CK G + + + +ML KG P +S+++ GL+++ K+
Sbjct: 601 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 660
Query: 492 ASGSVES 498
SG+ S
Sbjct: 661 ESGTTVS 667
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L+NA + D L+F++ ++K ++P+ T +I +LC+ ++ A+ + M
Sbjct: 425 FNILINAYARCGMMDKAMLIFEDMQNK-GMIPDTVTFATVISSLCRIGRLDDALHKFNHM 483
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY-TVLMDGYIKLGR 270
+G+ P+ + ++ G G++ AK + +++++ P Y + +++ K GR
Sbjct: 484 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 543
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + +MD M G PN VT+ ++E +C EA LLD M P+ +
Sbjct: 544 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 603
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++D C+ G+++DA +++ +L K P + + S I+H L + + AKK+F E E G
Sbjct: 604 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 663
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ S+ TY ++ G+C + EA L + + V+ ++ T+N++I K+G +E
Sbjct: 664 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 723
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV 509
+ + + G PN ++S++I L + + E + SG SDS LL IV
Sbjct: 724 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA-SDSR--LLNHIV 780
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 42/421 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I Y RP+L + R+ K + S +L+ V++ D H +F +
Sbjct: 182 LIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ- 239
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V+P + CN +IK LCK +++ A ++ +M G+ P+L T++ I+ G ++ A
Sbjct: 240 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 299
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGY---------------------------------- 265
+RV +++ G P++ TY L+ GY
Sbjct: 300 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 359
Query: 266 -IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS--GEARNLLDDMLQRKYV 322
K GR +A + D M G +P+ ++Y M+ + S + N+ + ML +
Sbjct: 360 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 419
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ + +I+ G ++ A +++ + K +PD +T+I LC+ G++ +A
Sbjct: 420 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 479
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV-EPNVFTYNMLIQGFC 440
F+ + G PS Y LI G C EL +A L +M+ K + P V ++ +I C
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K G EG I++ M+ G PN +F+ L+EG GN E ++ A AS +E +
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD-AMASIGIEPNC 598
Query: 501 W 501
+
Sbjct: 599 Y 599
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 2/349 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N ++ +I+ AR D L+ E QN + F TVI + GR + A+
Sbjct: 421 NKHVFNILINAYARCGMMDKA-MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 479
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V S L+ + + +K P V + +I LC
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ V ++D M G PN+VT +++ GY G++E A + + G P+
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 599
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+DGY K GR+ DA+ V +M GV+P V Y +++ + +++ A+ + +M
Sbjct: 600 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 659
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ S V+ LC ++A L ++L N D + +I + K G+
Sbjct: 660 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 719
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
EAK+LFD G +P++ TY+ +I + + EA L+ + + G
Sbjct: 720 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 768
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 20/266 (7%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P TY +L+D Y ++ R + ++ + NG+ P++ +Y +I F K + +
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 228
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L +M+++ +P +C +I LC+ +++ A + ++++ PD S II
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK + +A+++ ++ E G+ P+ +TYN+LI G S E+ R++ M GV P
Sbjct: 289 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 348
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
V N I K G E I + M+ KG P+ S+S ++ G
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY------------- 395
Query: 488 SMATASGSVESDS---WNFLLTRIVS 510
ATA+ S +D +N +LT+ ++
Sbjct: 396 --ATATDSCLADVHNIFNLMLTKGIA 419
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 8/306 (2%)
Query: 81 YHSIIHKL---ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+ SII+ L R + ++ + Q P + F +++ Y L G E A
Sbjct: 531 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT----FNSLMEGYCLVGNMEEAFALL 586
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + TL++ +N R D +F++ HK V P +I++ L +
Sbjct: 587 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK-GVKPTSVLYSIILHGLFQ 645
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++ EM G ++ T+ +LGG + A + + D T
Sbjct: 646 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 705
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ K+GR +A ++ D + G+ PN TY +MI K + EA NL +
Sbjct: 706 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 765
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + S L ++ +L + +V A + N + + S + +EGK
Sbjct: 766 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 825
Query: 378 EAKKLF 383
E KL
Sbjct: 826 EHIKLL 831
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 44/270 (16%)
Query: 149 VRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ ++++N L + R D++ +M + + PNV T N L++ C ++E A
Sbjct: 528 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR-----PNVVTFNSLMEGYCLVGNMEEA 582
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA------------------------- 239
+LD M S+G+ PN + T++ GY G I++A
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642
Query: 240 ----------KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
K++F ++++ G TY V++ G + +A +++++ V+ +
Sbjct: 643 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 702
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+T+ ++I A K + EA+ L D + VP+ +I L +E E+A L+
Sbjct: 703 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 762
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ + D+ + + I+ L + ++ +A
Sbjct: 763 SVEKSGHASDSRLLNHIVRMLLNKAEVAKA 792
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 220/434 (50%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN I +C +
Sbjct: 325 EAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPXIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLXKLGVQDPTAL--NTLIRGXSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 211/420 (50%), Gaps = 4/420 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
+SH +I +++ F + SLL + ++ + L+ +I Y + + +
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTS-SSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSS 113
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + N LL +V + ++ F S K KV +V++ I+IK
Sbjct: 114 ISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES--KIKVDLDVYSFGIVIK 171
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ ++E + +L E+ G PN+V +TT++ G RG+IE AK +F ++ G V
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVA 231
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TYTVL+ G K G ++ ++M+++GV PN TY ++ CK ++ +A L
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLF 291
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M +R + +I LC E K +A ++ ++ P+ +T+I C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
GK+ +A L + + RG PSL+TYN L++G C+ + + AG++ +M E+G++P+ TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+LI F ++ N ++ I++ M + G P+ ++S+LI G G E ++ + A
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 231/509 (45%), Gaps = 14/509 (2%)
Query: 11 APSCLLQSIGG-------ARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQI 63
A S LLQ I G SL RLY + +++ + Q+LD ++
Sbjct: 58 AQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLY-EVMINAYVQSQSLDSSISY 116
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRN 123
F+ F + +++++ + + +F+ E K ++ F VI+
Sbjct: 117 FNEM--VDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYS--FGIVIKG 172
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
AG E + + + +F +V TL++ + + +F KF +V
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF-FEMGKFGLVA 231
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N +T +LI L K + + ++M G+ PNL T+ ++ + G ++A ++F
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLF 291
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ +RG + TY L+ G + + +A KVMD+M+ +G+ PN +TY +I+ FC
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K G+A +L D+ R PS ++ C++G A ++ K + + P
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I + + +A +L E G P + TY+ LI G C ++ EA RL+ MV
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
K +EPN YN ++ G+CK G++ +R+ EM +K PN S+ +IE L + E
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531
Query: 483 VGKVVSMATASGSVESDSWNFLLTRIVSD 511
+V +G SDS L++R +D
Sbjct: 532 AEGLVEKMIDTGIDPSDSILNLISRAKND 560
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 18/427 (4%)
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
+SII +L + + D ES++ ++ + +LF + GL A+ R+
Sbjct: 229 NSIIKELCKMKEMDKAESIVQKMVDS---GIAPDLFTYSLIIDGLCKSK--AMDKAERVL 283
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKAL 195
+ V+ R + N+L+ + M+ S FK V+P V CN I AL
Sbjct: 284 EQMVEAGTRPNSITYNSLIHGYS---ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 340
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--IENAKRVFGDILDRGWVP 253
K A + D M G P++++++T+L GY D + + +F +L +G P
Sbjct: 341 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 400
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + +L++ Y + G + A+ + ++M++ G+ P+ VT+ +I + C+ + +A +
Sbjct: 401 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 460
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA-ISSTIIHWLCK 372
+ M+ PS A+ +I C G++ A EL ++ K+ P S+II+ LCK
Sbjct: 461 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 520
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG++ E K + D + G P+++T+N+L+ G C + EA L D M G+EPN +
Sbjct: 521 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 580
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y L+ G+CK G + + + +ML KG P +S+++ GL+++ K+
Sbjct: 581 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 640
Query: 492 ASGSVES 498
SG+ S
Sbjct: 641 ESGTTVS 647
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L+NA + D L+F++ ++K ++P+ T +I +LC+ ++ A+ + M
Sbjct: 405 FNILINAYARCGMMDKAMLIFEDMQNK-GMIPDTVTFATVISSLCRIGRLDDALHKFNHM 463
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY-TVLMDGYIKLGR 270
+G+ P+ + ++ G G++ AK + +++++ P Y + +++ K GR
Sbjct: 464 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 523
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + +MD M G PN VT+ ++E +C EA LLD M P+ +
Sbjct: 524 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 583
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++D C+ G+++DA +++ +L K P + + S I+H L + + AKK+F E E G
Sbjct: 584 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 643
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ S+ TY ++ G+C + EA L + + V+ ++ T+N++I K+G +E
Sbjct: 644 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 703
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV 509
+ + + G PN ++S++I L + + E + SG SDS LL IV
Sbjct: 704 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA-SDSR--LLNHIV 760
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 190/423 (44%), Gaps = 42/423 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I Y RP+L + R+ K + S +L+ V++ D H +F +
Sbjct: 162 LIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ- 219
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V+P + CN +IK LCK +++ A ++ +M G+ P+L T++ I+ G ++ A
Sbjct: 220 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 279
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGY---------------------------------- 265
+RV +++ G P++ TY L+ GY
Sbjct: 280 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 339
Query: 266 -IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS--GEARNLLDDMLQRKYV 322
K GR +A + D M G +P+ ++Y M+ + S + N+ + ML +
Sbjct: 340 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 399
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ + +I+ G ++ A +++ + K +PD +T+I LC+ G++ +A
Sbjct: 400 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 459
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV-EPNVFTYNMLIQGFC 440
F+ + G PS Y LI G C EL +A L +M+ K + P V ++ +I C
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 519
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K G EG I++ M+ G PN +F+ L+EG GN E ++ A AS +E +
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD-AMASIGIEPNC 578
Query: 501 WNF 503
+ +
Sbjct: 579 YIY 581
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 2/349 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N ++ +I+ AR D L+ E QN + F TVI + GR + A+
Sbjct: 401 NKHVFNILINAYARCGMMDKA-MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 459
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V S L+ + + +K P V + +I LC
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 519
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ V ++D M G PN+VT +++ GY G++E A + + G P+
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 579
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+DGY K GR+ DA+ V +M GV+P V Y +++ + +++ A+ + +M
Sbjct: 580 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 639
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ S V+ LC ++A L ++L N D + +I + K G+
Sbjct: 640 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 699
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
EAK+LFD G +P++ TY+ +I + + EA L+ + + G
Sbjct: 700 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 748
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 20/266 (7%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P TY +L+D Y ++ R + ++ + NG+ P++ +Y +I F K + +
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 208
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L +M+++ +P +C +I LC+ +++ A + ++++ PD S II
Sbjct: 209 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 268
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK + +A+++ ++ E G+ P+ +TYN+LI G S E+ R++ M GV P
Sbjct: 269 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 328
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
V N I K G E I + M+ KG P+ S+S ++ G
Sbjct: 329 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY------------- 375
Query: 488 SMATASGSVESDS---WNFLLTRIVS 510
ATA+ S +D +N +LT+ ++
Sbjct: 376 --ATATDSCLADVHNIFNLMLTKGIA 399
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 11/306 (3%)
Query: 81 YHSIIHKL---ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+ SII+ L R + ++ + Q P + F +++ Y L G E A
Sbjct: 511 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT----FNSLMEGYCLVGNMEEAFALL 566
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + TL++ +N R D +F++ HK V P +I++ L +
Sbjct: 567 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK-GVKPTSVLYSIILHGLFQ 625
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++ EM G ++ T+ +LGG + A + + D T
Sbjct: 626 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 685
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ K+GR +A ++ D + G+ PN TY +MI K + EA NL +
Sbjct: 686 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + S L ++ +L + +V A + N + + S + +EG I
Sbjct: 746 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI- 804
Query: 378 EAKKLF 383
K LF
Sbjct: 805 --KGLF 808
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 119/271 (43%), Gaps = 44/271 (16%)
Query: 149 VRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ ++++N L + R D++ +M + + PNV T N L++ C ++E A
Sbjct: 508 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR-----PNVVTFNSLMEGYCLVGNMEEA 562
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA------------------------- 239
+LD M S+G+ PN + T++ GY G I++A
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622
Query: 240 ----------KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
K++F ++++ G TY V++ G + +A +++++ V+ +
Sbjct: 623 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 682
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+T+ ++I A K + EA+ L D + VP+ +I L +E E+A L+
Sbjct: 683 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 742
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+ + D+ + + I+ L + ++ +A
Sbjct: 743 SVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 773
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 212/444 (47%), Gaps = 36/444 (8%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + TY S++ L + R ++V LL E+ + +K F IR G AG+ A
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEM-ETLGLKPNVYTFTICIRVLGRAGKINEA 279
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF---KNSRHKFKVV-------- 182
+ R++ V + L++AL ++ D +F K RHK V
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 183 -----------------------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
P+V T IL+ ALCK + A LD M G++PN
Sbjct: 340 FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPN 399
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
L T+ T++ G + +++A +F ++ G P A TY V +D Y K G A++ +
Sbjct: 400 LHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 459
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
+M+ G+ PN V + + K + EA+ + + VP S ++ + G
Sbjct: 460 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 519
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYN 398
++++A +L ++ C PD + +++I+ L K ++ EA K+F + + P+++TYN
Sbjct: 520 EIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 579
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TL+AG+ ++ ++ EA L++ MV+KG PN T+N L CK +++L +M+D
Sbjct: 580 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 639
Query: 459 GCFPNKTSFSLLIEGLYESGNEGE 482
GC P+ +++ +I GL ++G E
Sbjct: 640 GCVPDVFTYNTIIFGLVKNGQVKE 663
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 192/387 (49%), Gaps = 6/387 (1%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQ 146
LA A +AV S L N + G+++ + +IR A F + K VQ
Sbjct: 726 LAEAGIDNAV-SFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQ 784
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+ + N L+ L++ ++ +F ++ +P+V T N L+ A K ++
Sbjct: 785 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNT-GCIPDVATYNFLLDAYGKSGKIDELFE 843
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL-DRGWVPDATTYTVLMDGY 265
+ EM + PN +TH ++ G V G++++A ++ D++ DR + P A TY L+DG
Sbjct: 844 IYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 903
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K GRL +A ++ + M D G PN Y ++I F K ++ A L M++ P
Sbjct: 904 SKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 963
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
++D LC G+V++ ++ L PD + II+ L K ++ EA LF+E
Sbjct: 964 KTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNE 1023
Query: 386 FE--RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ RG P L TYN+LI + + + EAG++++++ G+EPNVFT+N LI+G+ G
Sbjct: 1024 MKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1083
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ + + M+ G PN ++ L
Sbjct: 1084 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 198/416 (47%), Gaps = 16/416 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+ + + LD A ++F G+ P+ TY +++ + + R D+V +E+
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRV----TYITLLDRFSDNRDLDSVNQFWSEM 356
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+++ P++ F ++ AG A + + ++ + NTL+ L++
Sbjct: 357 EKDGHVPDVVT----FTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLR 412
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
R D +F N V P +T + I K D A+ ++M + G+ PN+V
Sbjct: 413 VHRLDDALEIFDN-MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 471
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
L G AK++F + D G VPD+ TY ++M Y K+G + +A+K++ EM
Sbjct: 472 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 531
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+N EP+ + +I K + EA + M + K P+ ++ L + GK+
Sbjct: 532 VENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 591
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTL 400
++A EL++ +++K C P+ +T+ LCK ++ A K LF + G +P + TYNT+
Sbjct: 592 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 651
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
I G+ ++ ++ EA + M +K V P+ T L+ G K G ++ +I+ L
Sbjct: 652 IFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFL 706
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 190/404 (47%), Gaps = 6/404 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ E F ++K ++R + T+ L + R +F V N ++
Sbjct: 134 GKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMR-EFGFVLNAYS 192
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI L K A+ V M G P+L T+++++ G R DIE+ + ++
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P+ T+T+ + + G++ +A +++ M+D G P+ VTY V+I+A C +K
Sbjct: 253 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 312
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A+ + M ++ P ++D + ++ + W + + +PD + ++
Sbjct: 313 CAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILV 372
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK G EA D ++G +P+L TYNTLI G+ L +A ++D+M GV+
Sbjct: 373 DALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVK 432
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P +TY + I + K G++ + E+M KG PN + + + L ++G + E ++
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492
Query: 487 VSMATASGSV-ESDSWNFLLT--RIVSDLDSGAGALDELLVKNC 527
G V +S ++N ++ V ++D L E +V+NC
Sbjct: 493 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE-MVENC 535
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 208/480 (43%), Gaps = 82/480 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ ++ ++ D LL+E+ +N P++ +L T+ + A R + A K
Sbjct: 507 TYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYK----ADRVDEAWKM 562
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F+R+++ ++ +V + NTLL L +N + +F+ K PN T N L LC
Sbjct: 563 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLC 621
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTI------------------------------ 226
K D+V A+++L +M MG VP++ T+ TI
Sbjct: 622 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT 681
Query: 227 ----LGGYVWRGDIENAKRV--------------------FGDILDRGWVPDATTYT--- 259
L G V G IE+A ++ G IL + +A +++
Sbjct: 682 LCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERL 741
Query: 260 ----VLMDG----------YIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGK 304
+ DG K + A + ++ +D GV+P TY ++I +
Sbjct: 742 VANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 801
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
A+++ + +P A ++D + GK+++ E++K + C P+ +
Sbjct: 802 MIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHN 861
Query: 365 TIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+I L K G + +A L+ + +R P+ TY LI G+ +S L EA +L++ M +
Sbjct: 862 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSD 921
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G PN YN+LI GF K G A + + M+ +G P+ ++S+L++ L G E
Sbjct: 922 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 981
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 38/287 (13%)
Query: 191 LIKALCKKDDVEGAIRVLDEMP-SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+I+ K ++ GA + ++ +G+ P L T+ ++GG + IE A+ VF + +
Sbjct: 757 IIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNT 816
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G +PD TY L+D Y K G++ + ++ EM + EPN +T+ ++I K
Sbjct: 817 GCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKA------ 870
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR-KNCMPDNAISSTIIH 368
G V+DA +L+ L+ ++ P +I
Sbjct: 871 -----------------------------GNVDDALDLYYDLMSDRDFSPTACTYGPLID 901
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G+++EAK+LF+ + G P+ YN LI G ++ E A L+ MV++GV P
Sbjct: 902 GLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ TY++L+ C +G EG+ E+ + G P+ ++L+I GL
Sbjct: 962 DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
FK+ +V TCN +++AL +E V D M + + T+ TI
Sbjct: 107 FKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLS 166
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G + A + + G+V +A +Y L+ +K T+A++V M +G P+
Sbjct: 167 VKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQ 226
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++ K + LL +M P+ I +L GK+ +A E+ KR+
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAEL 410
+ C PD + +I LC K+ AK++F + + G P +TY TL+ ++ +L
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDL 346
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ W +M + G P+V T+ +L+ CK GN E L+ M D+G PN +++ L
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTL 406
Query: 471 IEGL 474
I GL
Sbjct: 407 ICGL 410
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 194/455 (42%), Gaps = 42/455 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+++I L R D + + ++ +K +I I YG +G A++T
Sbjct: 399 NLHTYNTLICGLLRVHRLDDALEIFDNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALET 457
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +++ + ++ + N L +L + R +F + +VP+ T N+++K
Sbjct: 458 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD-IGLVPDSVTYNMMMKCYS 516
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +++ AI++L EM P+++ +++ ++ A ++F + + P
Sbjct: 517 KVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 576
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G K G++ +A+++ + M G PN +T+ + + CK + A +L M
Sbjct: 577 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 636
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ VP +I L + G+V++A + ++ +K PD T++ + K G I
Sbjct: 637 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLI 695
Query: 377 WEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG---------- 424
+A K+ F P+ L + L+ + A + A + +V G
Sbjct: 696 EDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILV 755
Query: 425 ---------------------------VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
V+P + TYN+LI G + + + ++ +
Sbjct: 756 PIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKN 815
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
GC P+ +++ L++ +SG E+ ++ +A
Sbjct: 816 TGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA 850
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 18/427 (4%)
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
+SII +L + + D ES++ ++ + +LF + GL A+ R+
Sbjct: 173 NSIIKELCKMKEMDKAESIVQKMVDS---GIAPDLFTYSLIIDGLCKSK--AMDKAERVL 227
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKAL 195
+ V+ R + N+L+ + M+ S FK V+P V CN I AL
Sbjct: 228 EQMVEAGTRPNSITYNSLIHGYS---ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 284
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--IENAKRVFGDILDRGWVP 253
K A + D M G P++++++T+L GY D + + +F +L +G P
Sbjct: 285 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 344
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + +L++ Y + G + A+ + ++M++ G+ P+ VT+ +I + C+ + +A +
Sbjct: 345 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 404
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA-ISSTIIHWLCK 372
+ M+ PS A+ +I C G++ A EL ++ K+ P S+II+ LCK
Sbjct: 405 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 464
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG++ E K + D + G P+++T+N+L+ G C + EA L D M G+EPN +
Sbjct: 465 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 524
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y L+ G+CK G + + + +ML KG P +S+++ GL+++ K+
Sbjct: 525 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 584
Query: 492 ASGSVES 498
SG+ S
Sbjct: 585 ESGTTVS 591
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L+NA + D L+F++ ++K ++P+ T +I +LC+ ++ A+ + M
Sbjct: 349 FNILINAYARCGMMDKAMLIFEDMQNK-GMIPDTVTFATVISSLCRIGRLDDALHKFNHM 407
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY-TVLMDGYIKLGR 270
+G+ P+ + ++ G G++ AK + +++++ P Y + +++ K GR
Sbjct: 408 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 467
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + +MD M G PN VT+ ++E +C EA LLD M P+ +
Sbjct: 468 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 527
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++D C+ G+++DA +++ +L K P + + S I+H L + + AKK+F E E G
Sbjct: 528 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 587
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ S+ TY ++ G+C + EA L + + V+ ++ T+N++I K+G +E
Sbjct: 588 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 647
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV 509
+ + + G PN ++S++I L + + E + SG SDS LL IV
Sbjct: 648 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA-SDSR--LLNHIV 704
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 190/423 (44%), Gaps = 42/423 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I Y RP+L + R+ K + S +L+ V++ D H +F +
Sbjct: 106 LIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ- 163
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V+P + CN +IK LCK +++ A ++ +M G+ P+L T++ I+ G ++ A
Sbjct: 164 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 223
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGY---------------------------------- 265
+RV +++ G P++ TY L+ GY
Sbjct: 224 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 283
Query: 266 -IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS--GEARNLLDDMLQRKYV 322
K GR +A + D M G +P+ ++Y M+ + S + N+ + ML +
Sbjct: 284 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 343
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ + +I+ G ++ A +++ + K +PD +T+I LC+ G++ +A
Sbjct: 344 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 403
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV-EPNVFTYNMLIQGFC 440
F+ + G PS Y LI G C EL +A L +M+ K + P V ++ +I C
Sbjct: 404 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 463
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K G EG I++ M+ G PN +F+ L+EG GN E ++ A AS +E +
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD-AMASIGIEPNC 522
Query: 501 WNF 503
+ +
Sbjct: 523 YIY 525
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 2/349 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N ++ +I+ AR D L+ E QN + F TVI + GR + A+
Sbjct: 345 NKHVFNILINAYARCGMMDKA-MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 403
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V S L+ + + +K P V + +I LC
Sbjct: 404 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 463
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ V ++D M G PN+VT +++ GY G++E A + + G P+
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 523
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+DGY K GR+ DA+ V +M GV+P V Y +++ + +++ A+ + +M
Sbjct: 524 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 583
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ S V+ LC ++A L ++L N D + +I + K G+
Sbjct: 584 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 643
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
EAK+LFD G +P++ TY+ +I + + EA L+ + + G
Sbjct: 644 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 692
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 238 NAKRVFGDILDRGWV------PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
N + G +DR W P TY +L+D Y ++ R + ++ + NG+ P++
Sbjct: 78 NLRNYRGQRMDR-WACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF 136
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
+Y +I F K + +A L +M+++ +P +C +I LC+ +++ A + +++
Sbjct: 137 SYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM 195
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
+ PD S II LCK + +A+++ ++ E G+ P+ +TYN+LI G S
Sbjct: 196 VDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMW 255
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
E+ R++ M GV P V N I K G E I + M+ KG P+ S+S +
Sbjct: 256 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 315
Query: 471 IEG 473
+ G
Sbjct: 316 LHG 318
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 11/306 (3%)
Query: 81 YHSIIHKL---ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+ SII+ L R + ++ + Q P + F +++ Y L G E A
Sbjct: 455 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT----FNSLMEGYCLVGNMEEAFALL 510
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + TL++ +N R D +F++ HK V P +I++ L +
Sbjct: 511 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK-GVKPTSVLYSIILHGLFQ 569
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++ EM G ++ T+ +LGG + A + + D T
Sbjct: 570 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 629
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ K+GR +A ++ D + G+ PN TY +MI K + EA NL +
Sbjct: 630 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + S L ++ +L + +V A + N + + S + +EG I
Sbjct: 690 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI- 748
Query: 378 EAKKLF 383
K LF
Sbjct: 749 --KGLF 752
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 44/270 (16%)
Query: 149 VRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ ++++N L + R D++ +M + + PNV T N L++ C ++E A
Sbjct: 452 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR-----PNVVTFNSLMEGYCLVGNMEEA 506
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA------------------------- 239
+LD M S+G+ PN + T++ GY G I++A
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566
Query: 240 ----------KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
K++F ++++ G TY V++ G + +A +++++ V+ +
Sbjct: 567 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 626
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+T+ ++I A K + EA+ L D + VP+ +I L +E E+A L+
Sbjct: 627 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 686
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ + D+ + + I+ L + ++ +A
Sbjct: 687 SVEKSGHASDSRLLNHIVRMLLNKAEVAKA 716
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 216/456 (47%), Gaps = 22/456 (4%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE--IKC 112
+ L+ ALQ F + + H+ DT+ +I L + + +L ++ PE +
Sbjct: 127 KKLEHALQFFRWTER-SGLIRHDRDTHMKMIKMLGEVQKLNHARCILLDM---PEKGVPW 182
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
E++F+ +I +YG AG + +VK F +++ V+R+++S NTL +++ RY + F
Sbjct: 183 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGRYMMAKRYF 242
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N V P T N+++ +E A+R D+M + G+ P+ VT+ TI+ GY
Sbjct: 243 -NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYCR 301
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ A+++F ++ P TYT ++ GY+ + R+ D +++ +EM G+EPN T
Sbjct: 302 FKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATT 361
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKRL 351
Y ++ C K EA+N+L +M+ + P +++ K++ + G + A E+ K +
Sbjct: 362 YSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAM 421
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTL 400
N + +I CK A KL D I PS YN +
Sbjct: 422 ATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPI 479
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C + + +A L+ ++++GV+ + N LI+G K GN + IL+ M +G
Sbjct: 480 IEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPESSYEILKIMSRRGV 538
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ LLI+ G G+ + G V
Sbjct: 539 PREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHV 574
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ +A+ + D+ ++G D + VL++ Y K G + ++VK+ +M+D GVE +Y
Sbjct: 165 LNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNT 224
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ + + + A+ + M+ P+ ++ ++E A + + +
Sbjct: 225 LFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRG 284
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +TII+ C+ K+ EA+KLF E + S PS++TY T+I G + +
Sbjct: 285 ISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGL 344
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL-LIEG 473
R++++M G+EPN TY+ L+ G C +G E IL+ M+ K P S L L+
Sbjct: 345 RIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVS 404
Query: 474 LYESGNEGEVGKVV-SMATASGSVESDSWNFLL 505
++G+ +V+ +MAT + E+ + L+
Sbjct: 405 QSKAGDMAAATEVLKAMATLNVPAEAGHYGVLI 437
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 191/450 (42%), Gaps = 59/450 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++II+ R + D E L E+K N P + + T+I+ Y R + ++
Sbjct: 291 TYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVT----YTTMIKGYLSVDRVDDGLRI 346
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF----------------- 179
F + F ++ + + +TLL L + + KN K
Sbjct: 347 FEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS 406
Query: 180 ---------KVVPNVFTCNI---------LIKALCKKDDVEGAIRVLDEM---------- 211
+V+ + T N+ LI+ CK AI++LD +
Sbjct: 407 KAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ 466
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
++ M P+ + I+ G A+ +F ++ RG V D L+ G+ K G
Sbjct: 467 DTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHAKEGNP 523
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+ +++ M GV Y ++I+++ + G+A+ LD M++ +VP SAL V
Sbjct: 524 ESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSV 583
Query: 332 IDLLCEEGKVEDACELWKRLLRKNC-MPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFERG 389
I+ L E+G+V+ A + ++ KN + DN + + I+ L G + EA D +
Sbjct: 584 IESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQN 643
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ L ++L++ + E + A +L D +E+ + + +Y+ ++ G
Sbjct: 644 GHTADL--DSLLSVLSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALLGAGKTLNAY 701
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+L ++++KG + S LI+ L + GN
Sbjct: 702 SVLCKIMEKGSSTDWKSSDELIKSLNQEGN 731
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 42/274 (15%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N LI+ K+ + E + +L M G+ + ++ Y+ +G+ +AK +++
Sbjct: 511 NNLIRGHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVE 570
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN--GVEPNEVTYGVMIEAFCKGKKS 306
G VPD+ + +++ + GR+ A +VM M D G+E N ++EA
Sbjct: 571 DGHVPDSALFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALL----- 625
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
R +++ L R IDLL + G D ++
Sbjct: 626 --MRGHVEEALGR------------IDLLNQNGHTADL-------------------DSL 652
Query: 367 IHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ L ++GK A KL D ER +Y+ ++ + + + A + ++EKG
Sbjct: 653 LSVLSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGS 712
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+ + + LI+ + GN K+ +L M+ KG
Sbjct: 713 STDWKSSDELIKSLNQEGNTKQA-DVLSRMIKKG 745
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 216/469 (46%), Gaps = 24/469 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL----- 101
L + Q L+ +F + PN+ H+ + ++IH L + + +SLL
Sbjct: 47 LYQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAY 106
Query: 102 -------------TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
L +P+I ++F ++ Y + A++ F + +
Sbjct: 107 RDFLSTQSVLSALVRLHDDPDI--NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPH 164
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + LLN+L +++ D+V ++K + V N+ N+LI A CK DVE A +L
Sbjct: 165 LHACTVLLNSLAKDRLTDMVWKVYKKMA-RIGVEANIHVYNVLIHACCKSGDVEKADNLL 223
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
EM S + P+L T+ T++ Y +G A V + G PD TY L+ G+ K
Sbjct: 224 SEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKE 283
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR+ +A+++ E+ D PN VTY +I+ +C+ +A L ++M + P+
Sbjct: 284 GRMREAMRLFKEIRD--ATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTY 341
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
++ LCE G++ DA +L + K PDN +T+I+ CK G + A K+ + E
Sbjct: 342 NSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVE 401
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G TY LI G C+ E+ A L M++ G P+ TY+ L+ G+C N +
Sbjct: 402 AGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEA 461
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+++ +E + KG +K+ + LI + K+ S+ G++
Sbjct: 462 VLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTL 510
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 175/363 (48%), Gaps = 11/363 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC-GENLFI--TVIRNYGLAGRPELA 133
N Y+ +IH ++ + ++LL+E+ E KC +LF T+I Y G A
Sbjct: 199 NIHVYNVLIHACCKSGDVEKADNLLSEM----ESKCVFPDLFTYNTLISLYCKKGMHYEA 254
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R+E+ ++ + + N+L++ + R +FK R PN T LI
Sbjct: 255 LSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR---DATPNHVTYTTLID 311
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ +D++ A+R+ +EM + G+ P +VT+ +IL G I +A ++ ++ ++ P
Sbjct: 312 GYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEP 371
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T L++ Y K+G + A+KV + M + G++ ++ TY +I FCK ++ A+ LL
Sbjct: 372 DNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELL 431
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
ML + PS ++D C + E +L +RK D ++ +I CK
Sbjct: 432 LSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKR 491
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
++ AKK+F E+G++ + Y +L + + A L D+M ++ + + Y
Sbjct: 492 EQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIY 551
Query: 433 NML 435
L
Sbjct: 552 RAL 554
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 204/421 (48%), Gaps = 39/421 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++R AGR E +K + R +N +++L ++ D F+ + F
Sbjct: 37 LVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKD-F 95
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ + N + NILI A CK ++ AI++ EM + G P+ T+ T++GG + A
Sbjct: 96 RGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEA 155
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE------------------- 280
++ + +L G TY +L+DG+ K R+ +AV++++E
Sbjct: 156 QQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDT 215
Query: 281 ----------------MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
ME +GV P EVT+ V+I+ CK + A+ + L+ PS
Sbjct: 216 LFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPS 275
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+C ++D C+ G V++A +++ + + C P++ + +I+ LCK ++ +A+++F+
Sbjct: 276 VVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFE 335
Query: 385 E-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E +R + P ++TY+T + G+C + + +A ++ +V+KG P+V Y LI G C +G
Sbjct: 336 EVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLG 395
Query: 444 NAKEGIRILE-EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWN 502
E ++ E +M GC PN + ++L+ G +G E ++ G V+ D
Sbjct: 396 RLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERG-VQPDCRT 454
Query: 503 F 503
F
Sbjct: 455 F 455
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 170/334 (50%), Gaps = 5/334 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NI I +LCK D ++ A E+ + N V++ ++ + I+ A ++FG++
Sbjct: 70 NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKA 129
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G P +TY L+ G ++ RL +A + + + +G + +TY ++++ FCK + E
Sbjct: 130 PGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPE 189
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A LL++++ R V +SA +ID L ++GK+ +A + R+ + P + +I
Sbjct: 190 AVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLID 249
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK ++ AK++F + E G PS++ + L+ G C+ + EA R+++ M +G P
Sbjct: 250 GLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTP 309
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N + N+LI G CK + + EE++ + P+ ++S ++GL + + +V+
Sbjct: 310 NDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVL 369
Query: 488 SMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
M G + T ++S L S G LDE
Sbjct: 370 CMLVDKGGTPD---VVMYTALISGLCS-LGRLDE 399
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 167/362 (46%), Gaps = 6/362 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+ +I+ + + D L E+K P + + T+I R A +
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKA-PGCAPSTSTYNTLIGGLCRVERLGEAQQF 158
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ R+ S + N L++ + R + V L+ + V + C +I L
Sbjct: 159 YERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNC--IIDTL 216
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
KK + A + M G+ P VT T ++ G + AK +F L+ G P
Sbjct: 217 FKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSV 276
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+ LMDG+ K G + +A ++ + M + G PN+V+ ++I CK K+ +AR + ++
Sbjct: 277 VICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEE 336
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+++R+ P +D LC +V+ A ++ L+ K PD + + +I LC G+
Sbjct: 337 VVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGR 396
Query: 376 IWEAKKLF--DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ EA+K+F D G P+ T N L+ G + L EA L+ VE+GV+P+ T++
Sbjct: 397 LDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456
Query: 434 ML 435
+
Sbjct: 457 AM 458
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNC--------------------------------MP 358
++ LC GK+++A EL+ L+ C +
Sbjct: 5 IVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLR 64
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE--RGSIPSLLTYNTLIAGMCESAELTEAGRL 416
+ + + I LCK I +A+ F E + RG + + ++YN LI C++ + EA +L
Sbjct: 65 ERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNT-VSYNILINAFCKTKRIDEAIQL 123
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ +M G P+ TYN LI G C++ E + E +L G + ++++L++G +
Sbjct: 124 FGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCK 183
Query: 477 SGNEGEVGKVVSMATASGSV 496
+ E ++++ A G V
Sbjct: 184 ADRVPEAVELLNELVARGGV 203
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-----LVHLMFKNSRHKFKV 181
A R A + F + K + V + +T ++ L + R D L L+ K
Sbjct: 324 AKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGG------ 377
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLD-EMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
P+V LI LC ++ A +V + +M + G PN T ++ G+ G ++ A+
Sbjct: 378 TPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEAR 437
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIK 267
+F ++RG PD T++ + + K
Sbjct: 438 ELFQRFVERGVQPDCRTFSAMANNTAK 464
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 217/458 (47%), Gaps = 42/458 (9%)
Query: 59 LALQIFHYAGKFH-PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
LA+++F + P + TY+ +I+ RAR D + L + G ++F
Sbjct: 169 LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRT---GLGPDVF 225
Query: 118 I--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD--------- 166
+I + G + A F ++E+ + +V + ++L+N L + K D
Sbjct: 226 SYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM 285
Query: 167 --------------LVHL-----MFKNSRHKFK------VVPNVFTCNILIKALCKKDDV 201
L+H M+K S FK +VP+V CN + ALCK +
Sbjct: 286 VGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 345
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A + D M G P+++++ +L GY G I +F ++ G VPD + L
Sbjct: 346 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++ Y +LG + ++ + ++M GV P+ +T+ +I AFC+ + +A + M+
Sbjct: 406 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 465
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN-AISSTIIHWLCKEGKIWEAK 380
P +A+ +I C + A EL +L K P ++II+ LCKEG++ E K
Sbjct: 466 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 525
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ D G P+L+T+N+L+ G C + EA L D M GVEP+++TYN L+ G+
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 585
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
CK G + + + +ML K S+++++ GL+++
Sbjct: 586 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 623
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 191/409 (46%), Gaps = 22/409 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I+ L + + D E +L ++ ++ + +I Y +G + +V+
Sbjct: 258 NVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLIHGYSTSGMWKESVRV 316
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV------PNVFTCNI 190
F + + V + N+ + AL ++ R K +R F + P+V +
Sbjct: 317 FKEMSSSLLVPDVGNCNSFMTALCKHGR-------IKEARDIFDSMVLKGPKPDVISYGA 369
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ + G + + M G+VP+ T++ Y G ++ + +F D+ +G
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD T++ ++ + +LGRL DA++ + M D GV P+ Y +I+ C + +A+
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAK 489
Query: 311 NLLDDMLQRKYVPSSALCCK----VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
L+ DML + P C K +I+ LC+EG+V + ++ ++ P+ +++
Sbjct: 490 ELISDMLSKGIPPP---CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 546
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ C G + EA L D E G P + TYNTL+ G C+ + +A L+ DM+ K V
Sbjct: 547 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 606
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+YN+++ G + + EM++ G + +++ ++ GL
Sbjct: 607 TLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 655
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 159/325 (48%), Gaps = 3/325 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
NTL+NA + D LMF++ K V P++ T + +I A C+ ++ A+ + M
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMT-KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY-TVLMDGYIKLGR 270
G+ P+ ++ ++ G R D+ AK + D+L +G P + T +++ K GR
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + V+D + G PN +T+ +++ +C EA LLD M P
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++D C+ G+++DA L++ +L K + + I+H L + + AK++F E E G
Sbjct: 581 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 640
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
S+ TY T++ G+C + EA L + + V+ ++ T+N++I+ K+G +E
Sbjct: 641 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 700
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL 474
+ + G P ++ ++I L
Sbjct: 701 ELFAAISTYGLVPTILTYRVMITNL 725
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 190/433 (43%), Gaps = 4/433 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y +++H A A +++L + + ++F T+I Y G + ++ F
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVP-DRHVFNTLINAYARLGMMDKSLLMFED 424
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K V + + +T+++A + R D F N V P+ + LI+ C +
Sbjct: 425 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF-NHMIDTGVPPDTAVYSCLIQGQCNRR 483
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTH-TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D+ A ++ +M S G+ P + T+I+ G + K V I+ G P+ T+
Sbjct: 484 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 543
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+DGY +G + +AV ++D ME GVEP+ TY +++ +CK + +A L DML
Sbjct: 544 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 603
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
++ +S ++ L + + A E++ ++ +T++ LC+ E
Sbjct: 604 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDE 663
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L ++ F +LT+N +I M + EA L+ + G+ P + TY ++I
Sbjct: 664 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 723
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
K + ++ + M C P+ + +I L G + G +S G +
Sbjct: 724 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILP 783
Query: 498 SDSWNFLLTRIVS 510
+ LL + S
Sbjct: 784 EATTTSLLIYLFS 796
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 182/423 (43%), Gaps = 63/423 (14%)
Query: 81 YHSIIHKLARARAFDAVESLL-----TELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
++++I+ AR D +SLL T+ NP+I F TVI + GR + A
Sbjct: 402 FNTLINAYARLGMMD--KSLLMFEDMTKQGVNPDIIT----FSTVISAFCRLGRLDDA-- 453
Query: 136 TFLRIEKFN--VQRSVRSLNTLLNALVQNK--RYDLVHLMFKNSRHKFKVVP----NVFT 187
+EKFN + V + + L+Q + R DLV S K +P FT
Sbjct: 454 ----MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 509
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+I LCK+ V V+D + G PNL+T +++ GY G+++ A + +
Sbjct: 510 S--IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 567
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G PD TY L+DGY K GR+ DA+ + +M V V+Y +++ + +++
Sbjct: 568 SVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 627
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A+ + +M++ S V+ LC ++A L ++L N D + +I
Sbjct: 628 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVI 687
Query: 368 HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES------------------- 407
+ K G+ EAK+LF G +P++LTY +I + +
Sbjct: 688 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCT 747
Query: 408 ----------------AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
E+ +AG + +KG+ P T ++LI F G +E I++
Sbjct: 748 PDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 807
Query: 452 LEE 454
L E
Sbjct: 808 LPE 810
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 223/433 (51%), Gaps = 19/433 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG AG + +VK F ++E+ V+R+ +S +TL +++ R+ + F N
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R D+M S + P+++T+ T++ GY ++ A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK + +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKADQHDKAVKLLDKLIEKDIILRPQSTLHMEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L +++ GV+ + N L++G + G+ +L+ ML + K+++
Sbjct: 383 GQTAKAEALVRQLLKLGVQ-DPTALNTLVRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 468 SLLIEGLYESGNE 480
L++ Y NE
Sbjct: 442 DSLVQS-YLKKNE 453
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
++I + K V+ ++++ +M +G+ ++ T+ + RG AKR F +L
Sbjct: 85 LMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSE 144
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P T+ V++ G+ G++ A + D+M+ + P+ +TY MI + + KK EA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDEA 204
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+M R P+ +I +V+DA L
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRL---------------------- 242
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+E K + G P+ +TY+TL+ G+C + +++EA + +MV+K + P
Sbjct: 243 -VEEMKGY-----------GIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTD 290
Query: 430 FTYNM-LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ M LI G CK GN +L+ M+ + +LIE ++ + K++
Sbjct: 291 NSIFMRLISGQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLL 349
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 44/312 (14%)
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N TH I+ + +A+ + D+ +G D + +++D Y K G + ++VK+
Sbjct: 44 NRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLF 103
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ME+ GVE +Y + + + + M+ ++Y
Sbjct: 104 QKMEELGVERTTKSYDTLFKVILRRGRF---------MMAKRY----------------- 137
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+ ++L + P + +I GK+ A + FD+ + I P ++TY
Sbjct: 138 ---------FNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITY 188
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NT+I G ++ EA + + +M + +EP V TY LI+G+ + + +R++EEM
Sbjct: 189 NTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG 248
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------D 511
G PN ++S L+ GL + E V+ +D N + R++S +
Sbjct: 249 YGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTD--NSIFMRLISGQCKTGN 306
Query: 512 LDSGAGALDELL 523
LD+ A L ++
Sbjct: 307 LDAAADVLKAMI 318
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 221/456 (48%), Gaps = 18/456 (3%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
DLALQ F +A + FS T+ ++ LA R + L+ + + + E
Sbjct: 118 DLALQFFRFAYR-RGGFSPEGATFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTL 176
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+I YG A P+ AVK F + V R+ S N +L A++ R + ++ N+
Sbjct: 177 AALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIY-NAMI 235
Query: 178 KFKVVPNVFTCNILI--KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+V T N LI LCKK +E A+RV +M G+ P++ T+ T+L +V GD
Sbjct: 236 ADGVAPDVSTYNTLIWGFGLCKK--METAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGD 293
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A++VF ++ G ++ +Y V++ GY++ R+ +AV + EM + G+ +E T+
Sbjct: 294 LESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAA 353
Query: 296 MIEAFCKGK-KSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACEL-WKRLL 352
++ C + + EAR +DDM +R+ P ++ +++ LC+ G ++ A E+ WK
Sbjct: 354 LMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQ 413
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS-------LLTYNTLIAGM 404
K+ + D ++ LC GK A ++ DE E+G++ S YN +I +
Sbjct: 414 FKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFL 473
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + +A + +++KGV+ +N LI+G K G + IL M + +
Sbjct: 474 CSNGSTAKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDP 532
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
S +LL++ + + + G + S +
Sbjct: 533 ESHALLVDSFLKKNEPADAKTALDSMMQQGHLPSPA 568
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 185/400 (46%), Gaps = 16/400 (4%)
Query: 120 VIRNYGLAGRPELAVKTF---LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
VI AGR +LA++ F R F+ + + +L L+ AL + + + ++
Sbjct: 107 VISGAASAGRADLALQFFRFAYRRGGFSPEGATFAL--LVPALASRRMLNHARCLVLDTM 164
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
F V P+ T LI A + + A+++ MP++G+ +++ +L + RG
Sbjct: 165 PSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGRE 224
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+R++ ++ G PD +TY L+ G+ ++ AV+V +M+ +GV P+ TY +
Sbjct: 225 AMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYNTL 284
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ A+ + AR + D+M +S +I E +VE+A L+ + K
Sbjct: 285 LNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGL 344
Query: 357 MPDNAISSTIIHWLC-KEGKIWEAKKLFDEF-ERGSIPSLLT-YNTLIAGMCESAELTEA 413
+ ++ LC +G++ EA+K D+ ER P + + L+ +C++ +L A
Sbjct: 345 RLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGA 404
Query: 414 GRL-WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS------ 466
+ W K V + Y +L++G C G + I +L+E+++KG + S
Sbjct: 405 LEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEAS 464
Query: 467 -FSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
++ +IE L +G+ + G + ++N L+
Sbjct: 465 AYNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKAAFNSLI 504
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR---------GDIENAK 240
+L++ LC E AI VLDE+ G + L + +L + G A+
Sbjct: 426 VLMEGLCAGGKCETAIEVLDELMEKGTL--LSPKSPVLEASAYNPVIEFLCSNGSTAKAE 483
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
F ++ +G V D + L+ G+ K G A +++ M V + ++ +++++F
Sbjct: 484 TFFRQLMKKG-VDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSF 542
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K + +A+ LD M+Q+ ++PS AL V++ L +G+V+ A + K ++ K +
Sbjct: 543 LKKNEPADAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKGVTENM 602
Query: 361 AISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++ I+ L G + EA ++ E G +P L + L+ G+C++ + EA +L D
Sbjct: 603 DVAHKILEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLLVGLCDNGRVMEAQKLADF 659
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+++ + + TY+ +++ +L ++ +KG ++ L+E L G
Sbjct: 660 ALDRDFDVSFSTYDRVLEALYAEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEG 718
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 7/241 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA-LVQNKRYDLVHLMFKNS 175
F ++IR + G PE A + + + V S L+++ L +N+ D +
Sbjct: 500 FNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADAKTALDSMM 559
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ P +F +++AL V+ A RV+ M G+ N+ IL RG
Sbjct: 560 QQGHLPSPALFKS--VMEALFNDGRVQTASRVMKSMIEKGVTENMDVAHKILEALFTRGH 617
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A +++ G +PD L+ G GR+ +A K+ D D + + TY
Sbjct: 618 VEEAIGRVNLMVENGCMPDLDK---LLVGLCDNGRVMEAQKLADFALDRDFDVSFSTYDR 674
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++EA +K+ A ++L + + V S C +++ L EG + A ++ R+L +N
Sbjct: 675 VLEALYAEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEGYSKQA-DILSRILAEN 733
Query: 356 C 356
Sbjct: 734 A 734
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 209/427 (48%), Gaps = 19/427 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTEL----KQNPEIKCGENLFIT---VIRNYGL 126
F+H ++Y + H L AR + S+L E+ + E + L+ T + +G+
Sbjct: 6 FNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGV 65
Query: 127 ----------AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
G E A + F ++++F V RS N LL+ + + D V FK+
Sbjct: 66 FDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 125
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
P VFT NI+I + K+ D+E A + +EM G++P+ VT+ +++ GY G +
Sbjct: 126 GA-GSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++ F ++ PD TY L++ + K G+L ++ EM+ +G++PN V+Y +
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++AFCK +A DM + +VP+ ++D C+ G + DA L +L
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+ + +I LC ++ EA+KLF + G IP+L +YN LI G ++ + A
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L +++ +G++P++ Y I G C + + ++ EM + G N ++ L++ +
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF 424
Query: 476 ESGNEGE 482
+SGN E
Sbjct: 425 KSGNPTE 431
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 196/405 (48%), Gaps = 10/405 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I + + +A L E+K I + ++I YG GR + V F
Sbjct: 135 TYNIMIDCMWKEGDIEAARGLFEEMKFRGLIP-DTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ + + V + N+L+N ++ + L F + + PNV + + L+ A CK+D
Sbjct: 194 MKSMSCEPDVITYNSLINCFCKSGKLP-KGLEFYREMKQSGLKPNVVSYSTLVDAFCKED 252
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ +M +G VPN T+T+++ G++ +A R+ ++L+ G + TYT
Sbjct: 253 MMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYT 312
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG R+ +A K+ +M GV PN +Y +I F K K A LL+++ R
Sbjct: 313 ALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 372
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P L I LC K+E A + + + I +T++ K G E
Sbjct: 373 GIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEG 432
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA----GRLWDDMVEKGVEPNVFTYNM 434
L +E E +++T+ LI G+C++ +++A GR+ +D G++PN Y
Sbjct: 433 LHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDF---GLQPNAAVYTA 489
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+I G CK K + E+M +G P++T+++ L++G + GN
Sbjct: 490 MIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGN 534
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 216/464 (46%), Gaps = 43/464 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I + D E+K + C ++ + ++I + +G+ ++ +
Sbjct: 170 TYNSMIDGYGKVGRLDDTVYFFEEMKS---MSCEPDVITYNSLINCFCKSGKLPKGLEFY 226
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ ++ +V S +TL++A + + + R + VPN FT L+ A CK
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR-RVGHVPNEFTYTSLVDANCK 285
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A R+ +EM +G+ N+VT+T ++ G ++ A+++FG ++ G +P+ +
Sbjct: 286 IGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS 345
Query: 258 YTVLMDGYIK-----------------------------------LGRLTDAVKVMDEME 282
Y L+ G++K L ++ A VM+EM+
Sbjct: 346 YNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQ 405
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+NG++ N + Y +++A+ K E +LL++M + + + C +ID LC+ V
Sbjct: 406 ENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVS 465
Query: 343 DACELWKRLLRK-NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
A + + R+ P+ A+ + +I LCKE ++ A LF++ + G +P Y +L
Sbjct: 466 KAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G + + EA L D M E G++ ++ Y L+ GF + ++ LEEM+ +
Sbjct: 526 MDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEI 585
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
P++ +++ YE G E + S + SD+ N L
Sbjct: 586 LPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNNNAL 629
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 170/365 (46%), Gaps = 15/365 (4%)
Query: 172 FKNSRHKFKVVPNVFTC--------NILIKALCKKDDVEGAIRVLDEMPSMG--MVPNLV 221
F ++ + +V ++ C +IL + + K ++E V DE+ S VP
Sbjct: 6 FNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELE-ECDVFDELWSTRNVCVPGFG 64
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+ + G +E A + F + P + L+ + KLG+ + +M
Sbjct: 65 VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G +P TY +MI+ K AR L ++M R +P + +ID + G++
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
+D ++ + +C PD +++I+ CK GK+ + + + E ++ + P++++Y+TL
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ C+ + +A + + DM G PN FTY L+ CKIGN + R+ EML+ G
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIV--SDLDSGAG 517
N +++ LI+GL ++ E K+ +G + + S+N L+ V ++D
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364
Query: 518 ALDEL 522
L+EL
Sbjct: 365 LLNEL 369
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 139/281 (49%), Gaps = 9/281 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG--RPELAV 134
N +Y+++IH +A+ D LL ELK I+ L+ T I +GL G + E A
Sbjct: 342 NLASYNALIHGFVKAKNMDRALELLNELKGRG-IQPDLLLYGTFI--WGLCGLEKIEAAK 398
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+++ ++ + TL++A ++ + +HL+ + +V V T +LI
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVT--VVTFCVLID 456
Query: 194 ALCKKDDVEGAIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK V AI M + G+ PN +T ++ G ++ A +F + G V
Sbjct: 457 GLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLV 516
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD T YT LMDG +K G + +A+ + D+M + G++ + + Y ++ F + + +AR+
Sbjct: 517 PDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSF 576
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
L++M+ + +P LC V+ E G +++A L L++
Sbjct: 577 LEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMK 617
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 224/431 (51%), Gaps = 18/431 (4%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E
Sbjct: 23 KNSEHALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
++++ +I +YG G + +VK F ++E+ V+R+++S + L +++ R+ + F N
Sbjct: 81 DMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N++I VE A R ++M S + P+++T+ T++ GY
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ + P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY
Sbjct: 200 KMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIA 402
+ + +I CK G+ +A KL D+ I PS YN ++
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPS--AYNPIVE 377
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+C + + ++A L +++ GV+ + N LI+G + G+ +L+ ML +
Sbjct: 378 YLCNNGQTSKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDS 436
Query: 463 NKTSFSLLIEG 473
K+++ L++
Sbjct: 437 EKSAYDSLVQS 447
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 192/382 (50%), Gaps = 3/382 (0%)
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
FD SL E+ Q+ I + F V+ + ++ + + ++E + + S
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L++ + R L + K P++ T L+ C+ + + A+ ++D M
Sbjct: 119 ILIHCFCRCSRLSLALAL-LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G VPN+V + T++ G D+ NA VF + +G DA TY L+ G GR TD
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A +++ +M ++PN + + +I+ F K EARNL +M++R VP+ +I+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIP 392
C G + DA ++ ++ K C PD +T+I CK ++ + KLF E +G +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
TYNTLI G C++ +L A ++++ MV+ GV P++ TYN+L+ C G ++ + ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
E++ + +++++I+GL
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGL 439
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 183/353 (51%), Gaps = 5/353 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ +L + + ++D+V ++ + + ++++ ILI C+ + A+ +
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLY-HKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT ++L G+ + A + + G+VP+ Y +++G K
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
L +A++V ME G+ + VTY +I + +A LL DM++RK P+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EF 386
+ID +EG + +A L+K ++R++ +P+ +++I+ C G + +AK +FD
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P ++TYNTLI G C+S + + +L+ +M +G+ + FTYN LI G+C+ G
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
++ M+D G P+ ++++L++ L N G++ K + M E D
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCL---CNNGKIEKALVMVEDLQKSEMD 426
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 207/446 (46%), Gaps = 11/446 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P + R++++I + D+ + ++H SH+ ++ +IH R
Sbjct: 74 RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL--GISHDLYSFTILIHCFCRCSRLS 131
Query: 96 AVESL---LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+L + +L P I +L + + R + AV ++ F +V
Sbjct: 132 LALALLGKMMKLGFRPSIVTLGSL----LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT++N L +N+ + +F K + + T N LI L A R+L +M
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ PN++ T ++ +V G++ A+ ++ +++ R VP+ TY L++G+ G L
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
DA + D M G P+ VTY +I FCK K+ + L +M + V + +I
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP 392
C+ GK+ A +++ R++ PD + ++ LC GKI +A + ++ ++ +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 393 -SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
++TYN +I G+C + +L EA L+ + KGV+P+ Y +I G C+ G +E ++
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYES 477
M + G P++ + + Y S
Sbjct: 487 CRRMKEDGFMPSERIYDETLRDHYTS 512
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 161/326 (49%), Gaps = 2/326 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P++ ++ + K + + I + +M ++G+ +L + T ++ + + A
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ G ++ G+ P T L++G+ + R +AV ++D M+ G PN V Y +I C
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + A + M ++ + +I L G+ DA L + ++++ P+
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I KEG + EA+ L+ E R S+ P++ TYN+LI G C L +A ++D M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V KG P+V TYN LI GFCK ++G+++ EM +G + +++ LI G ++G
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 481 GEVGKVVSMATASG-SVESDSWNFLL 505
KV + G S + ++N LL
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
K +A +L +MLQ + +PS +V+ ++ + K + L+ ++ D +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+IH C+ ++ A L + + G PS++T +L+ G C+ EA L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G PNV YN +I G CK + + + M KG + +++ LI GL SG +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 484 GKVV 487
+++
Sbjct: 239 ARLL 242
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 196/423 (46%), Gaps = 72/423 (17%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
V S N +++ + + D + +F R + P+V T NI+I +LC + +E A V+
Sbjct: 131 VYSYNAMISGFSKANQIDSANQVFDRMRSR-GFSPDVVTYNIMIGSLCSRGKLELAFEVM 189
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DE+ G P+++T+T ++ + G I A +F +++ RG PD TY ++ G K
Sbjct: 190 DELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKE 249
Query: 269 G-----------------------------------RLTDAVKVMDEMEDNGVEPNEVTY 293
G R D ++M +M +G EPN VT+
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++I +FC+ + EA N+L+ M ++ P S +I C+EG+++ A E ++++
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Query: 354 KNCMPDNAISSTIIHWLCKEG-----------------------------KIW------E 378
C+PD +TI+ LCK G +W +
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A ++ E R I P +TYN+LI+ +C + EA L DM +P V ++N+++
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLL 489
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G CK EGI +L M++KGC PN+TS+ LLIEG+ +G E ++ + G +
Sbjct: 490 GMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVIS 549
Query: 498 SDS 500
DS
Sbjct: 550 GDS 552
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 170/345 (49%), Gaps = 6/345 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V++ N +I K + ++ A +V D M S G P++VT+ ++G RG +E A V
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++L G P TYT+L++ I GR+ +A+++ DE+ G+ P+ TY +I CK
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A + + + R P ++ + + ED L K ++ C P+
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I C+EG++ EA + + E+G P +Y+ LI+ C+ L A + MV
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G P++ YN ++ CK G A + + E++ + GC P +++ + L+ GN+
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428
Query: 482 EVGKVVSMATASGSVESD--SWNFLLTRIVSD--LDSGAGALDEL 522
+ +++S G ++ D ++N L++ + D +D G L ++
Sbjct: 429 KALEMISEMIRKG-IDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 157/297 (52%), Gaps = 2/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V C LIK +++ A+RV++ + + G P++ ++ ++ G+ I++A +V
Sbjct: 95 PDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQV 153
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F + RG+ PD TY +++ G+L A +VMDE+ +G +P+ +TY ++IEA
Sbjct: 154 FDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATIL 213
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA L D+++ R P +I +C+EG + A + + L + C PD
Sbjct: 214 EGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVS 273
Query: 363 SSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++ + + + ++L D G P+++T++ LI+ C + EA + + M
Sbjct: 274 YNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMK 333
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
EKG+ P+ ++Y+ LI FCK G I LE+M+ GC P+ +++ ++ L + G
Sbjct: 334 EKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFG 390
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 5/286 (1%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ +G+ PD T L+ G+ L A++VM+ +E G +P+ +Y MI F K +
Sbjct: 88 VVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQ 146
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A + D M R + P +I LC GK+E A E+ LL+ C P +
Sbjct: 147 IDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTI 206
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I EG+I EA +LFDE RG P L TYN +I G+C+ A + +G
Sbjct: 207 LIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG 266
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
P+V +YN+L++ F ++G R++++M+ GC PN + S+LI G E
Sbjct: 267 CNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAV 326
Query: 485 KVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
V+ + G + +S S++ L++ + LD L++++ C
Sbjct: 327 NVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 214/467 (45%), Gaps = 47/467 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +L+ F +NL A+++ + + +Y+++I ++A D+
Sbjct: 95 PDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG---DPDVYSYNAMISGFSKANQIDSAN 151
Query: 99 SLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ ++ +P++ + +I + G+ ELA + + K + SV + L
Sbjct: 152 QVFDRMRSRGFSPDVVT----YNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTIL 207
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ A + R + +F + + P+++T N +I+ +CK+ + A+ + + + G
Sbjct: 208 IEATILEGRINEALELFDELVSR-GLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG 266
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P++V++ +L ++ + E+ +R+ D++ G P+ T+++L+ + + GR+ +AV
Sbjct: 267 CNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAV 326
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
V++ M++ G+ P+ +Y +I AFCK + A L+ M+ +P ++ L
Sbjct: 327 NVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATL 386
Query: 336 CEEGKVEDACELWKRL-----------------------------------LRKNCMPDN 360
C+ G + A +++++L +RK PD
Sbjct: 387 CKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDE 446
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDD 419
+++I LC++G + EA L + E P+++++N ++ GMC++ + E L
Sbjct: 447 ITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLIT 506
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
MVEKG PN +Y +LI+G G E + + + G +S
Sbjct: 507 MVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSS 553
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 5/231 (2%)
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ K E+ L+ ++ + + P LC K+I ++ A + + +L PD
Sbjct: 73 CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVME-ILETYGDPDV 131
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I K +I A ++FD RG P ++TYN +I +C +L A + D+
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+++ G +P+V TY +LI+ G E + + +E++ +G P+ +++ +I G+ + G
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
E V +A G + + S+N LL + S + G + ++++ C
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGC 302
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 78/153 (50%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
K+++ C GK ++ + ++ K PD + + +I + +A ++ + E
Sbjct: 67 KLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETY 126
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + +YN +I+G ++ ++ A +++D M +G P+V TYN++I C G +
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+++E+L GC P+ ++++LIE G E
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINE 219
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 218/431 (50%), Gaps = 15/431 (3%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E+L++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDLWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG AG + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T NI+I VE A R ++M S + P+++T+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P T T L+ GY+ + R+ DA+++ +EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR+ L +M+ + P+ +++ ++I C+ G ++ A ++ + ++R +
Sbjct: 265 LCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLQAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI---------PSLLTYNTLIAGMCESAE 409
+ +I CK G+ +A L D+ I + YN LI +C +
Sbjct: 325 EAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIILRPQSTLHMEXIAYNPLIEYLCNNGR 384
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+A L +++ GV+ ++ N LI G + G+ +L+ ML + K+++
Sbjct: 385 TAKAETLVRQLMKLGVQDSI-ALNTLILGHSQEGSPDSAFELLKIMLRRKIDSAKSAYDS 443
Query: 470 LIEGLYESGNE 480
L++ Y NE
Sbjct: 444 LVQS-YLKKNE 453
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 18/427 (4%)
Query: 82 HSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIE 141
+SII +L + + D ES++ ++ + +LF + GL A+ R+
Sbjct: 87 NSIIKELCKMKEMDKAESIVQKMVDS---GIAPDLFTYSLIIDGLCKSK--AMDKAERVL 141
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKAL 195
+ V+ R + N+L+ + M+ S FK V+P V CN I AL
Sbjct: 142 EQMVEAGTRPNSITYNSLIHGYS---ISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 198
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD--IENAKRVFGDILDRGWVP 253
K A + D M G P++++++T+L GY D + + +F +L +G P
Sbjct: 199 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 258
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ + +L++ Y + G + A+ + ++M++ G+ P+ VT+ +I + C+ + +A +
Sbjct: 259 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 318
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA-ISSTIIHWLCK 372
+ M+ PS A+ +I C G++ A EL ++ K+ P S+II+ LCK
Sbjct: 319 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 378
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
EG++ E K + D + G P+++T+N+L+ G C + EA L D M G+EPN +
Sbjct: 379 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 438
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
Y L+ G+CK G + + + +ML KG P +S+++ GL+++ K+
Sbjct: 439 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 498
Query: 492 ASGSVES 498
SG+ S
Sbjct: 499 ESGTTVS 505
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L+NA + D L+F++ ++K ++P+ T +I +LC+ ++ A+ + M
Sbjct: 263 FNILINAYARCGMMDKAMLIFEDMQNK-GMIPDTVTFATVISSLCRIGRLDDALHKFNHM 321
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY-TVLMDGYIKLGR 270
+G+ P+ + ++ G G++ AK + +++++ P Y + +++ K GR
Sbjct: 322 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 381
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + +MD M G PN VT+ ++E +C EA LLD M P+ +
Sbjct: 382 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 441
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++D C+ G+++DA +++ +L K P + + S I+H L + + AKK+F E E G
Sbjct: 442 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 501
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ S+ TY ++ G+C + EA L + + V+ ++ T+N++I K+G +E
Sbjct: 502 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 561
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV 509
+ + + G PN ++S++I L + + E + SG SDS LL IV
Sbjct: 562 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA-SDSR--LLNHIV 618
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 190/423 (44%), Gaps = 42/423 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I Y RP+L + R+ K + S +L+ V++ D H +F +
Sbjct: 20 LIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQ- 77
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V+P + CN +IK LCK +++ A ++ +M G+ P+L T++ I+ G ++ A
Sbjct: 78 GVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA 137
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGY---------------------------------- 265
+RV +++ G P++ TY L+ GY
Sbjct: 138 ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHA 197
Query: 266 -IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS--GEARNLLDDMLQRKYV 322
K GR +A + D M G +P+ ++Y M+ + S + N+ + ML +
Sbjct: 198 LFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIA 257
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ + +I+ G ++ A +++ + K +PD +T+I LC+ G++ +A
Sbjct: 258 PNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 317
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV-EPNVFTYNMLIQGFC 440
F+ + G PS Y LI G C EL +A L +M+ K + P V ++ +I C
Sbjct: 318 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 377
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K G EG I++ M+ G PN +F+ L+EG GN E ++ A AS +E +
Sbjct: 378 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD-AMASIGIEPNC 436
Query: 501 WNF 503
+ +
Sbjct: 437 YIY 439
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 2/349 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N ++ +I+ AR D L+ E QN + F TVI + GR + A+
Sbjct: 259 NKHVFNILINAYARCGMMDKA-MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 317
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V S L+ + + +K P V + +I LC
Sbjct: 318 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 377
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ V ++D M G PN+VT +++ GY G++E A + + G P+
Sbjct: 378 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 437
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+DGY K GR+ DA+ V +M GV+P V Y +++ + +++ A+ + +M
Sbjct: 438 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 497
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ S V+ LC ++A L ++L N D + +I + K G+
Sbjct: 498 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 557
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
EAK+LFD G +P++ TY+ +I + + EA L+ + + G
Sbjct: 558 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 606
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 20/266 (7%)
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
R P TY +L+D Y ++ R + ++ + NG+ P++ +Y +I F K + +
Sbjct: 8 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 66
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L +M+++ +P +C +I LC+ +++ A + ++++ PD S II
Sbjct: 67 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK + +A+++ ++ E G+ P+ +TYN+LI G S E+ R++ M GV P
Sbjct: 127 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 186
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
V N I K G E I + M+ KG P+ S+S ++ G
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY------------- 233
Query: 488 SMATASGSVESDS---WNFLLTRIVS 510
ATA+ S +D +N +LT+ ++
Sbjct: 234 --ATATDSCLADVHNIFNLMLTKGIA 257
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 8/306 (2%)
Query: 81 YHSIIHKL---ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+ SII+ L R + ++ + Q P + F +++ Y L G E A
Sbjct: 369 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT----FNSLMEGYCLVGNMEEAFALL 424
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ ++ + TL++ +N R D +F++ HK V P +I++ L +
Sbjct: 425 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK-GVKPTSVLYSIILHGLFQ 483
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++ EM G ++ T+ +LGG + A + + D T
Sbjct: 484 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 543
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++ K+GR +A ++ D + G+ PN TY +MI K + EA NL +
Sbjct: 544 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ + S L ++ +L + +V A + N + + S + +EGK
Sbjct: 604 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 663
Query: 378 EAKKLF 383
E KL
Sbjct: 664 EHIKLL 669
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 44/270 (16%)
Query: 149 VRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ ++++N L + R D++ +M + + PNV T N L++ C ++E A
Sbjct: 366 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQR-----PNVVTFNSLMEGYCLVGNMEEA 420
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA------------------------- 239
+LD M S+G+ PN + T++ GY G I++A
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480
Query: 240 ----------KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
K++F ++++ G TY V++ G + +A +++++ V+ +
Sbjct: 481 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 540
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+T+ ++I A K + EA+ L D + VP+ +I L +E E+A L+
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 600
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ + D+ + + I+ L + ++ +A
Sbjct: 601 SVEKSGHASDSRLLNHIVRMLLNKAEVAKA 630
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L+ ++ A R A K F + + S+ + +L L +N D +++ +
Sbjct: 473 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK- 531
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V ++ T NI+I A+ K + A + D + + G+VPN+ T++ ++ +
Sbjct: 532 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 591
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E A +F + G D+ ++ + + A + + +N + T +
Sbjct: 592 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISL 651
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
+ F + K E LL + V ++A
Sbjct: 652 LASLFSREGKYREHIKLLPANMTMAVVAATA 682
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 220/434 (50%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S + L +++ RY + F N
Sbjct: 86 MIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T +LI VE A R ++M S + P++VT+ T++ GY E A
Sbjct: 145 GIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN + Y ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAAKAETLVRQLLKWGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
+ L++ Y NE
Sbjct: 441 YDSLVQS-YLKKNE 453
>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
Length = 671
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 214/430 (49%), Gaps = 18/430 (4%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
DLALQ F +A + FS T+ ++ LA R + L+ + + + E
Sbjct: 41 DLALQFFRFAYR-RGGFSPEGATFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTL 99
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
+I YG A P+ AVK F + V R+ S N +L A++ R + ++ N+
Sbjct: 100 AALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIY-NAMI 158
Query: 178 KFKVVPNVFTCNILI--KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
V P+V T N LI LCKK +E A+RV +M G+ P++ T+ T+L +V GD
Sbjct: 159 ADGVAPDVSTYNTLIWGFGLCKK--METAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGD 216
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E+A++VF ++ G ++ +Y V++ GY++ R+ +AV + EM + G+ +E T+
Sbjct: 217 LESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAA 276
Query: 296 MIEAFCKGK-KSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACEL-WKRLL 352
++ C + + EAR +DDM +R+ P ++ +++ LC+ G ++ A E+ WK
Sbjct: 277 LMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQ 336
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS-------LLTYNTLIAGM 404
K+ + D ++ LC GK A ++ DE E+G++ S YN +I +
Sbjct: 337 FKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFL 396
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + +A + +++KGV+ +N LI+G K G + IL M + +
Sbjct: 397 CSNGSTAKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDP 455
Query: 465 TSFSLLIEGL 474
S +LL++
Sbjct: 456 ESHALLVDSF 465
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 185/400 (46%), Gaps = 16/400 (4%)
Query: 120 VIRNYGLAGRPELAVKTF---LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
VI AGR +LA++ F R F+ + + +L L+ AL + + + ++
Sbjct: 30 VISGAASAGRADLALQFFRFAYRRGGFSPEGATFAL--LVPALASRRMLNHARCLVLDTM 87
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
F V P+ T LI A + + A+++ MP++G+ +++ +L + RG
Sbjct: 88 PSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGRE 147
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+R++ ++ G PD +TY L+ G+ ++ AV+V +M+ +GV P+ TY +
Sbjct: 148 AMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYNTL 207
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ A+ + AR + D+M +S +I E +VE+A L+ + K
Sbjct: 208 LNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGL 267
Query: 357 MPDNAISSTIIHWLC-KEGKIWEAKKLFDEF-ERGSIPSLLT-YNTLIAGMCESAELTEA 413
+ ++ LC +G++ EA+K D+ ER P + + L+ +C++ +L A
Sbjct: 268 RLSEKTFAALMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGA 327
Query: 414 GRL-WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS------ 466
+ W K V + Y +L++G C G + I +L+E+++KG + S
Sbjct: 328 LEVHWKSGQFKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEAS 387
Query: 467 -FSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
++ +IE L +G+ + G + ++N L+
Sbjct: 388 AYNPVIEFLCSNGSTAKAETFFRQLMKKGVDDKAAFNSLI 427
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 141/300 (47%), Gaps = 16/300 (5%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR---------GDIENA 239
+L++ LC E AI VLDE+ G + L + +L + G A
Sbjct: 348 GVLMEGLCAGGKCETAIEVLDELMEKGTL--LSPKSPVLEASAYNPVIEFLCSNGSTAKA 405
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ F ++ +G V D + L+ G+ K G A +++ M V + ++ +++++
Sbjct: 406 ETFFRQLMKKG-VDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDS 464
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
F K + +A+ LD M+Q+ ++PS AL V++ L +G+V+ A + K ++ K +
Sbjct: 465 FLKKNEPADAKTALDSMMQQGHLPSPALFKSVMEALFNDGRVQTASRVMKSMIEKGVTEN 524
Query: 360 NAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
++ I+ L G + EA ++ E G +P L + L+ G+C++ + EA +L D
Sbjct: 525 MDVAHKILEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLLVGLCDNGRVMEAQKLAD 581
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+++ + + TY+ +++ +L ++ +KG ++ L+E L G
Sbjct: 582 FALDRDFDVSFSTYDRVLEALYAEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEG 641
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 7/241 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA-LVQNKRYDLVHLMFKNS 175
F ++IR + G PE A + + + V S L+++ L +N+ D +
Sbjct: 423 FNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHALLVDSFLKKNEPADAKTALDSMM 482
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ P +F +++AL V+ A RV+ M G+ N+ IL RG
Sbjct: 483 QQGHLPSPALFKS--VMEALFNDGRVQTASRVMKSMIEKGVTENMDVAHKILEALFTRGH 540
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A +++ G +PD L+ G GR+ +A K+ D D + + TY
Sbjct: 541 VEEAIGRVNLMVENGCMPDLDK---LLVGLCDNGRVMEAQKLADFALDRDFDVSFSTYDR 597
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++EA +K+ A ++L + + V S C +++ L EG + A ++ R+L +N
Sbjct: 598 VLEALYAEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEGYSKQA-DILSRILAEN 656
Query: 356 C 356
Sbjct: 657 A 657
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 217/458 (47%), Gaps = 42/458 (9%)
Query: 59 LALQIFHYAGKFH-PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
LA+++F + P + TY+ +I+ RAR D + L + G ++F
Sbjct: 98 LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRT---GLGPDVF 154
Query: 118 I--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD--------- 166
+I + G + A F ++E+ + +V + ++L+N L + K D
Sbjct: 155 SYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM 214
Query: 167 --------------LVHL-----MFKNSRHKFK------VVPNVFTCNILIKALCKKDDV 201
L+H M+K S FK +VP+V CN + ALCK +
Sbjct: 215 VGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 274
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A + D M G P+++++ +L GY G I +F ++ G VPD + L
Sbjct: 275 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 334
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
++ Y +LG + ++ + ++M GV P+ +T+ +I AFC+ + +A + M+
Sbjct: 335 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 394
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN-AISSTIIHWLCKEGKIWEAK 380
P +A+ +I C + A EL +L K P ++II+ LCKEG++ E K
Sbjct: 395 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 454
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+ D G P+L+T+N+L+ G C + EA L D M GVEP+++TYN L+ G+
Sbjct: 455 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 514
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
CK G + + + +ML K S+++++ GL+++
Sbjct: 515 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 552
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 190/403 (47%), Gaps = 10/403 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I+ L + + D E +L ++ ++ + +I Y +G + +V+
Sbjct: 187 NVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLIHGYSTSGMWKESVRV 245
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + V + N+ + AL ++ R +F + K P+V + L+
Sbjct: 246 FKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLK-GPKPDVISYGALLHGYA 304
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ G + + M G+VP+ T++ Y G ++ + +F D+ +G PD
Sbjct: 305 TAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDII 364
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T++ ++ + +LGRL DA++ + M D GV P+ Y +I+ C + +A+ L+ DM
Sbjct: 365 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDM 424
Query: 317 LQRKYVPSSALCCK----VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L + P C K +I+ LC+EG+V + ++ ++ P+ ++++ C
Sbjct: 425 LSKGIPPP---CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCL 481
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EA L D E G P + TYNTL+ G C+ + +A L+ DM+ K V +
Sbjct: 482 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 541
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
YN+++ G + + EM++ G + +++ ++ GL
Sbjct: 542 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 584
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 159/325 (48%), Gaps = 3/325 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
NTL+NA + D LMF++ K V P++ T + +I A C+ ++ A+ + M
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMT-KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY-TVLMDGYIKLGR 270
G+ P+ ++ ++ G R D+ AK + D+L +G P + T +++ K GR
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + V+D + G PN +T+ +++ +C EA LLD M P
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG 389
++D C+ G+++DA L++ +L K + + I+H L + + AK++F E E G
Sbjct: 510 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 569
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
S+ TY T++ G+C + EA L + + V+ ++ T+N++I+ K+G +E
Sbjct: 570 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 629
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL 474
+ + G P ++ ++I L
Sbjct: 630 ELFAAISTYGLVPTILTYRVMITNL 654
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 190/433 (43%), Gaps = 4/433 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y +++H A A +++L + + ++F T+I Y G + ++ F
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVP-DRHVFNTLINAYARLGMMDKSLLMFED 353
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K V + + +T+++A + R D F N V P+ + LI+ C +
Sbjct: 354 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF-NHMIDTGVPPDTAVYSCLIQGQCNRR 412
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTH-TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D+ A ++ +M S G+ P + T+I+ G + K V I+ G P+ T+
Sbjct: 413 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 472
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+DGY +G + +AV ++D ME GVEP+ TY +++ +CK + +A L DML
Sbjct: 473 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 532
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
++ +S ++ L + + A E++ ++ +T++ LC+ E
Sbjct: 533 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDE 592
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A L ++ F +LT+N +I M + EA L+ + G+ P + TY ++I
Sbjct: 593 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 652
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
K + ++ + M C P+ + +I L G + G +S G +
Sbjct: 653 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILP 712
Query: 498 SDSWNFLLTRIVS 510
+ LL + S
Sbjct: 713 EATTTSLLIYLFS 725
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 182/423 (43%), Gaps = 63/423 (14%)
Query: 81 YHSIIHKLARARAFDAVESLL-----TELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
++++I+ AR D +SLL T+ NP+I F TVI + GR + A
Sbjct: 331 FNTLINAYARLGMMD--KSLLMFEDMTKQGVNPDIIT----FSTVISAFCRLGRLDDA-- 382
Query: 136 TFLRIEKFN--VQRSVRSLNTLLNALVQNK--RYDLVHLMFKNSRHKFKVVP----NVFT 187
+EKFN + V + + L+Q + R DLV S K +P FT
Sbjct: 383 ----MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 438
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+I LCK+ V V+D + G PNL+T +++ GY G+++ A + +
Sbjct: 439 S--IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 496
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G PD TY L+DGY K GR+ DA+ + +M V V+Y +++ + +++
Sbjct: 497 SVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 556
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A+ + +M++ S V+ LC ++A L ++L N D + +I
Sbjct: 557 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVI 616
Query: 368 HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES------------------- 407
+ K G+ EAK+LF G +P++LTY +I + +
Sbjct: 617 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCT 676
Query: 408 ----------------AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
E+ +AG + +KG+ P T ++LI F G +E I++
Sbjct: 677 PDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 736
Query: 452 LEE 454
L E
Sbjct: 737 LPE 739
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 198/397 (49%), Gaps = 6/397 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ S+I KL D + ++ + ++K L+ VI + + +LA F R
Sbjct: 89 TFGSLIRKLCELNFTDKALQIFHQMI-DMKVKPDAFLYTVVIGHLCKINKLDLAASYFER 147
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + L+++L + +++ H +F+ K P + T ++ CK
Sbjct: 148 MVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS-PELVTYATVVNGYCKAG 206
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A+ ++ + G P+ ++T++ G + A+ +F + G V D YT
Sbjct: 207 RIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYT 264
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+ G K G+L +A V +M + G P+ V+Y V+I + CK + EA+ L+D ++R
Sbjct: 265 SFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMER 324
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIHWLCKEGKIWE 378
K +P +C ++D LC+ +VE+AC + +R+L + P S +I LCK ++ +
Sbjct: 325 KCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDD 384
Query: 379 AKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + + R G +P ++TY +I C+ L EA L+ M E+G +V YN+LI+
Sbjct: 385 AYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIR 444
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G+C+ E I ++EEM +G PN S S +++GL
Sbjct: 445 GYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGL 481
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 171/332 (51%), Gaps = 2/332 (0%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
Q + + N+LL V + + + +FK+ P+ FT LI+ CK + + A+
Sbjct: 14 QHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTL-FRPDDFTYGTLIRGFCKAEQIPQAV 72
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+L EM + G+ P +VT +++ + A ++F ++D PDA YTV++
Sbjct: 73 NLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHL 132
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K+ +L A + M +G P++VTY V++ + K K + + ++ML + + P
Sbjct: 133 CKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL 192
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
V++ C+ G+++ A L +RL P ++ ST+I LCK + EA++LF E
Sbjct: 193 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-E 251
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
G + ++ Y + I+G+C++ +L EA + M+E G P+ +YN++I CK
Sbjct: 252 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 311
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
E ++++ +++ C P ++L++GL +S
Sbjct: 312 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKS 343
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 6/317 (1%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G N T ++L +V G A RVF D L + PD TY L+ G+ K ++ A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V ++ EM+ G+ P VT+G +I C+ + +A + M+ K P + L VI
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPS 393
LC+ K++ A ++R+++ C+PD + ++H L K K + ++F+E +G P
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
L+TY T++ G C++ + +A L + G P+ Y+ LI G CK E + E
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLLTRIVSD- 511
+ G + ++ I GL ++G E V V M A + + S+N ++ + D
Sbjct: 252 --MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309
Query: 512 -LDSGAGALDELLVKNC 527
+ +D+ + + C
Sbjct: 310 RVSEAKELMDQAMERKC 326
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
++ + I AG+ + A +++ + S N ++ +L ++ R + +
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 321
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG-MVPNLVTHTTILGGYVWRG 234
+ K +P V C +L+ LCK VE A +L+ M G P++VT++ ++ G
Sbjct: 322 MER-KCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKAD 380
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+++A V + G VPD TYT ++D + K+GRL +A ++ M + G + V Y
Sbjct: 381 RLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYN 440
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I +C+ K EA ++++M R P+ ++D LC+E +VE+A L +++ +
Sbjct: 441 ILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFE 500
Query: 355 NCMPDN 360
+ +PD+
Sbjct: 501 S-LPDS 505
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 191/392 (48%), Gaps = 6/392 (1%)
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
L P ++F T++ G + AV+ R+ + V + R+ N +L L +N+
Sbjct: 123 LALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNR 182
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ LV +F++ PNVFT NI+I LCK+ ++ A + M +MG P++VT+
Sbjct: 183 QGGLVRRLFEHLP-----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTY 237
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+++ GY G++E + + ++ G D TY L++ + K G + A EM+
Sbjct: 238 NSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKR 297
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
GV N VT ++AFCK EA L M R +P+ ++D C+ G+++D
Sbjct: 298 LGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDD 357
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIA 402
A L ++ + +P+ + ++ LCKEGK+ A + ER + + L Y TLI
Sbjct: 358 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH 417
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G + A L ++M KG+E +V Y LI G CK+ E +L +M D G P
Sbjct: 418 GHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRP 477
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
N ++ +++ +++G E E ++ SG
Sbjct: 478 NTVIYTTIMDAFFKAGKESEAVALLHKIPDSG 509
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 207/445 (46%), Gaps = 42/445 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+S+I + + VE L++E++++ C ++ + +I + G E A F
Sbjct: 236 TYNSLIDGYGKCGELEEVELLVSEMRKS---GCAADVVTYNALINCFSKFGWIEKAYSYF 292
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ V +V +L+T ++A + +F R + ++PN FT L+ CK
Sbjct: 293 GEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVR-GMMPNEFTYTSLVDGTCK 351
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ AI +LDEM G+VPN+VT+T ++ G G + A V + G +
Sbjct: 352 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELL 411
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
YT L+ G+ A+ +++EM++ G+E + YG +I CK +K EA++LL M
Sbjct: 412 YTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMD 471
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
P++ + ++D + GK +A L ++ P+ +I LCK G I+
Sbjct: 472 DCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIY 531
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK------------- 423
EA FD+ E G P++ Y TLI G C+ L++A L ++MV+K
Sbjct: 532 EAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLI 591
Query: 424 ----------------------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G++ +++ Y I GFC + +E +L EM+ G
Sbjct: 592 DGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGIT 651
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKV 486
P+KT+++ LI + GN E +
Sbjct: 652 PDKTAYNCLIRKYQKLGNMEEASSL 676
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y ++I L + + D +SLL ++ + ++ ++ T++ + AG+ AV +I
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKM-DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKI 505
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+Q +V + L++ L + F R + + PNV LI CK
Sbjct: 506 PDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR-ELGLDPNVQVYTTLIDGFCKIGS 564
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A+ +++EM GM + V +T+++ G++ +GD++ A + +++ G D YT
Sbjct: 565 LSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTC 624
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+ G+ + + +A V+ EM G+ P++ Y +I + K EA +L ++M
Sbjct: 625 FISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 5/179 (2%)
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
L +RL P+ + +I +LCK+G++ EA+ LF + G P ++TYN+LI G
Sbjct: 186 LVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ EL E L +M + G +V TYN LI F K G ++ EM G N
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLV 524
+ S ++ + G E K+ + G + ++ F T +V D AG LD+ +V
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNE---FTYTSLV-DGTCKAGRLDDAIV 360
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 227/455 (49%), Gaps = 33/455 (7%)
Query: 32 TPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA 91
+ +K +L + ++ ++ + +Q F++ K P + HN + + S++++L R
Sbjct: 63 SSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISK-RPFYKHNMNCFISMLNRLVRD 121
Query: 92 RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL-RIEKFNVQRSVR 150
R F + + L I RN R V FL I S+
Sbjct: 122 RVFAPADHIRI-------------LMIKACRNEEEIRR----VADFLNEISGMGFGFSLY 164
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGA 204
S NTLL +Q ++++V + +R+ +K + P++ T N LI L KK V A
Sbjct: 165 SCNTLL---IQLAKFEMV----EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+L ++ + P++ T+T+++ G+ +++ A VF ++ G P++ TY+ L++G
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
GR+ +A+ +++EM + G+EP TY + I A C + EA L+ M +R P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+I L GK+E A L+ ++L++ +P+ + +I+ LC G+ A K+F
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397
Query: 385 EFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E GS+ + TYN +I G+C ++ +A L++ M++ G P V TYN LI G+ G
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
N R+L+ M + GC P++ +++ L+ G + G
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 199/407 (48%), Gaps = 5/407 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++I L+R + L ++ + + + +I + GR A+K
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP-NTVTYNALINELCVGGRFSTALKI 395
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E + ++ N ++ L + ++F+ K +P V T N LI
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML-KMGPLPTVVTYNTLINGYL 454
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +V A R+LD M G P+ T+ ++ G+ G +E+A F ++++ G P+
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+YT L+DG+ K G++ A+ ++ ME+ G PN +Y +I K + EA + D M
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+++ +P+ +ID LC G+ + A +++ + ++ C+P+ S++I+ LC+EGK
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
EA+++ E G P+L TY+TL++G+C EA +L DM E+G P+ Y L+
Sbjct: 635 DEAERM---SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
CK ++I + KG + + + LI L ++G E
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEA 738
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 217/437 (49%), Gaps = 17/437 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S + R L++A+ ++H K N TY+++I++L F + ++
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLK--EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----N 162
+ + + +I+ L G E A+ F ++ K +V + NTL+N + N
Sbjct: 402 HGSL-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
L+ LM +N P+ +T N L+ K +E A EM G+ PN V+
Sbjct: 461 NAARLLDLMKENG-----CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+T ++ G+ G ++ A + + + G P+ +Y +++G K R ++A K+ D+M
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+ G+ PN +TY +I+ C+ ++ A + DM +RK +P+ +I LC+EGK +
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
+A +R+ C P ST++ LC++G+ +EA++L + ERG P Y +L+
Sbjct: 636 EA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
C++ E+ A +++ + KG + ++ Y LI CK G +E + + ML+K
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751
Query: 462 PNKTSFSLLIEGLYESG 478
++ +++L++GL + G
Sbjct: 752 ADEIVWTVLVDGLLKEG 768
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 197/445 (44%), Gaps = 41/445 (9%)
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
++T +I+ K + R + + S + + +P++ +L + RN L +LA F
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL----DLAFGVF 256
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ K + + +TL+N L R D M + K + P V+T + I ALC
Sbjct: 257 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPITALCA 315
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E AI ++ M G PN+ T+T ++ G G +E A ++ +L G VP+ T
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++ GR + A+K+ ME +G N TY +I+ C G +A L + ML
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ +P+ +I+ +G V +A L + C PD + ++ K GK+
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 378 EAKKLFDEF------------------------------------ERGSIPSLLTYNTLI 401
A F E E G P++ +YN +I
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ + +EA ++ D MVE+G+ PNV TY LI G C+ G + +I +M + C
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKV 486
PN ++S LI GL + G E ++
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAERM 640
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 157/350 (44%), Gaps = 37/350 (10%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
++IKA ++++ L+E+ MG +L + T+L +E A+ ++ +L+
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P T+ L++ K G++ +A ++ ++ + P+ TY +I C+ + A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+ D M++ P+S +I+ LC EG+V++A ++ + ++ K P + I
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC EA +L + RG P++ TY LI+G+ +L A L+ M+++G+ PN
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372
Query: 429 VFTYNML-----------------------------------IQGFCKIGNAKEGIRILE 453
TYN L I+G C G+ ++ + + E
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+ML G P +++ LI G GN +++ + +G E D W +
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG-CEPDEWTY 481
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%), Gaps = 10/326 (3%)
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVI 121
F++ + N +Y ++I ++ D SLL K+ E+ C N+ + VI
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL---KRMEEMGCNPNVESYNAVI 555
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
R A K ++ + + +V + TL++ L +N R +F + K K
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD-MEKRKC 614
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+PN++T + LI LC++ + A R M +G P L T++T++ G +G A++
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 670
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D+ +RG+ PD Y L+ + K + A+K+ +E G + + Y +I A C
Sbjct: 671 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 730
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + EA+ L D+ML++++ + ++D L +EG+++ +L + KN P+
Sbjct: 731 KAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQ 790
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ L + GK E++ L D+ +
Sbjct: 791 TYVILGRELSRIGKSIESEPLADKLK 816
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 205/440 (46%), Gaps = 17/440 (3%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR----ARAFDAVESLLTELKQNP 108
R + LD A ++F K N N TY ++I+ L A D +E + TE P
Sbjct: 244 RNRKLDKAFEVFDRMVKDGCN--PNSVTYSTLINGLCNEGRIGEAMDMLEEM-TEKGIEP 300
Query: 109 EIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV 168
+ + I + GR + A+ + K SV++ +++ L + + +L
Sbjct: 301 TVYT----YTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA 356
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
M+ + K +VPN T N LI LC + A+++ D M G + N T+ I+
Sbjct: 357 IGMY-HKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G DIE A VF +L G P TY L+ +K G L +A + + M+++ EP
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+E TY +I FCKG K A + +ML+ P+ +ID C+EGK++ A L+
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+R+ C + II L K + EA+K + E+G P+ +TY +LI G+C++
Sbjct: 536 ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
A +++ +M +K PN TY LI G C+ G R+ E GC P ++
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTY 651
Query: 468 SLLIEGLYESGNEGEVGKVV 487
S L+ GL G E ++V
Sbjct: 652 STLVSGLCREGRSNEASQLV 671
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 214/449 (47%), Gaps = 20/449 (4%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P + L P + +I N D ALQ F++ K H + H+ + S++++L + +
Sbjct: 60 PELNRLASTLRPHHVSKIINTHINTDTALQFFYWISKRH-FYKHDMGCFVSMLNRLVKDK 118
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+ + L I RN R + + ++ S
Sbjct: 119 ILAPADHVRI-------------LMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSF 165
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFK--VVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
NTLL +Q ++D+V F V P++ T N +I LCKK V+ A+ V ++
Sbjct: 166 NTLL---LQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ + P+ T+T+++ G+ ++ A VF ++ G P++ TY+ L++G GR
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A+ +++EM + G+EP TY V I + C + +A NL+ M ++ PS
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTA 342
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+I L GK+E A ++ ++L++ +P+ + +I+ LC EG+ A K+FD E G
Sbjct: 343 IISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
++ + TYN +I G+ ++ +A +++ M++ G P V TYN LI K G
Sbjct: 403 TLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNAT 462
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESG 478
R L M + C P++ ++ LI G + G
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGG 491
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 241/513 (46%), Gaps = 38/513 (7%)
Query: 15 LLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNF 74
L++S+G CS S T T ++S +FR ++LA+ ++H K
Sbjct: 324 LVRSMGKKGCSPSVQTYTA-------------IISGLFRAGKMELAIGMYHKMLK--EGL 368
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL-- 132
N TY+++I++L F + ++ + + + + +I+ GL G ++
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQT-YNQIIK--GLFGMDDIEK 425
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH------LMFKNSRHKFKVVPNVF 186
A+ F ++ K +V + NTL+ V+N + ++ M K S + P+
Sbjct: 426 AMVVFNKMLKDGPSPTVVTYNTLI---VENLKRGYLNNATRFLYMMKESNCE----PDER 478
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T LI CK ++ A EM G+ PN T+T ++ GY G I+ A +F +
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERM 538
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ G TY ++ G K R ++A K +M + G++PN +TY +I CK +
Sbjct: 539 EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTAT 598
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A + +M ++ +P++ +I LC+EGKV+ A +RL C P ST+
Sbjct: 599 NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTL 654
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LC+EG+ EA +L + E+G PS+ Y +L+ C+S ++ A +++ M KG
Sbjct: 655 VSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGF 714
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+P++F Y +LI C + A+E + I + +L K + +++L++GL + G+ K
Sbjct: 715 QPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMK 774
Query: 486 VVSMATASGSVESDSWNFLLTRIVSDLDSGAGA 518
+ + + S +L R +S + G
Sbjct: 775 FLYLMESRNCTPSLHTYIILARELSKVGKSIGT 807
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 1/231 (0%)
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K +T A V ++ +GV+P+ +T+ MI CK K EA + + + Q P +
Sbjct: 174 KFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAF 233
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I C K++ A E++ R+++ C P++ ST+I+ LC EG+I EA + +E
Sbjct: 234 TYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEM 293
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E+G P++ TY I+ +C+ + +A L M +KG P+V TY +I G + G
Sbjct: 294 TEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKM 353
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ I + +ML +G PN +++ LI L G G K+ G++
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 151/349 (43%), Gaps = 12/349 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S + LD A F+ K S N TY ++I + D SL +++
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKC--GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE 540
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
N C ++ + +I R A K ++ + +Q + + +L+N L +N
Sbjct: 541 N---GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTA 597
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+L +F K +PN T LI LC++ V+ A R+ + G P + T++
Sbjct: 598 TNLAFKIFHEMEKK-NCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYS 652
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T++ G G A ++ ++ ++G P Y L+ + K ++ A+++ + M
Sbjct: 653 TLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVK 712
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G +P+ Y V+I A C ++ EA N+ +L++++ + ++D L +EG +
Sbjct: 713 GFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLC 772
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS 393
+ + +NC P + L K GK ++ + S+PS
Sbjct: 773 MKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVSLPS 821
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 364 STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+T++ L K + A+ ++ + F G PSLLT+NT+I +C+ ++ EA +++ + +
Sbjct: 166 NTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQ 225
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ P+ FTY LI G C+ + + + M+ GC PN ++S LI GL NEG
Sbjct: 226 FDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL---CNEGR 282
Query: 483 VGKVVSM 489
+G+ + M
Sbjct: 283 IGEAMDM 289
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 224/481 (46%), Gaps = 53/481 (11%)
Query: 51 IFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA----VESLLTELKQ 106
I + ++ + A ++F + + + S++ ++ ++IH L A + ++SL+ LK+
Sbjct: 48 ILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKR 107
Query: 107 NPEIKCGENLFITVIRNYGLA----GRPELAVKTFLRIEKFN----VQRSVR------SL 152
+ E + + + G L + FL + F V R ++ +
Sbjct: 108 HSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKAC 167
Query: 153 NTLLNALVQNKRYDLV----------------HLMFKNSRHKFK---------------- 180
++LN LV+ +R+D V H+ F + FK
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227
Query: 181 --VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PNV+ I I LC+ + +E A ++ + M G++PNL T++ ++ GY G++
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++ +IL +P+ + L+DG+ K L A + M GV+PN Y +I
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
CK EA LL +M P +I+ LC E +V +A L++++ + P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
+A +++IH CKE + +A L E + P+++T++TLI G C ++ A L+
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+M KG+ P+V TY LI K N KE +R+ +ML+ G PN +F+ L++G ++
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 527
Query: 478 G 478
G
Sbjct: 528 G 528
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 187/400 (46%), Gaps = 9/400 (2%)
Query: 83 SIIHKLARARAFDAV---ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
SI++ L R R FD+V L+ P++ LF + GL + E K
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ-GLYSKKE---KLLDE 224
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ ++ +V + L ++ + + MF+ + K V+PN++T + +I CK
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK-KHGVLPNLYTYSAMIDGYCKTG 283
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+V A + E+ ++PN+V T++ G+ ++ A+ +F ++ G P+ Y
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G+ K G + +AV ++ EME + P+ TY ++I C + EA L M
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ PSSA +I C+E +E A +L + P+ ST+I C I A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L+ E +G +P ++TY LI + A + EA RL+ DM+E G+ PN T+ L+ G
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
F K G I +E + N F+ LIEGL ++G
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 143/287 (49%), Gaps = 1/287 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
KF V PN++ N LI CK ++ A+ +L EM S+ + P++ T+T ++ G +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A R+F + + P + TY L+ GY K + A+ + EM +GVEPN +T+ +I
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ +C + A L +M + VP +ID +E +++A L+ +L
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P++ + ++ KEG++ A + E ++ S + + + LI G+C++ + A R
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ DM G+ P++ +Y +++G + + + + +M+ G PN
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 160/335 (47%), Gaps = 4/335 (1%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN-KRYDLVHLMFKN 174
+F T++ + A A F+ + KF V ++ N L++ ++ + V L+ +
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL--S 363
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P+VFT ILI LC +D V A R+ +M + + P+ T+ +++ GY
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++E A + ++ G P+ T++ L+DGY + + A+ + EM G+ P+ VTY
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I+A K EA L DML+ P+ ++D +EG++ A + ++ ++
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEA 413
++ + +I LC+ G I A + F + G P + +Y +++ G + +T+
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
L DM++ G+ PN+ +L + + G K
Sbjct: 604 MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 148/339 (43%), Gaps = 16/339 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
LV + + L A +F + KF N Y+ +IH ++ LL+E++
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKF--GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAV--KTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ ++F I GL ++A + F +++ + S + N+L++ K
Sbjct: 368 ---LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC--KE 422
Query: 165 YDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
Y++ + S V PN+ T + LI C D++ A+ + EM G+VP++VT+
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T ++ + +++ A R++ D+L+ G P+ T+ L+DG+ K GRL+ A+ E
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ 542
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL---CEEGK 340
N V + +IE C+ A DM P C + +L +E +
Sbjct: 543 QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD---ICSYVSMLKGHLQEKR 599
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ D L +++ +P+ ++ + + G + A
Sbjct: 600 ITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 218/484 (45%), Gaps = 63/484 (13%)
Query: 47 LVSMIFRQQNLDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+S + + D AL++F AG F PN +H TY+ +I + S+ +++
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPN-AH---TYNVLIRGFCKGGQMHQAVSVFSDM 58
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
K + P L + + G+ A+K F ++ + S N LL
Sbjct: 59 KSSGLLPNASTMNTLLLGLCE----IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM 114
Query: 162 NKRY--DLVHLMFKNSRHKFKVVPNVFTCNILIKALC----KKDDVEGAIRVLDEMPSMG 215
R L HL ++ R V T N+++K LC + +E A+ EM + G
Sbjct: 115 AGRVRDALAHL--QDMRKSSSSVATG-TYNLVLKGLCWENKSANRLEQAMEFFKEMKASG 171
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P+L ++ +L G + A +F + PD TY VLMDGY K+G+ +A
Sbjct: 172 VEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQ 228
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+M E+ G EPN TY ++I +CK K EA + M++ VP++ +I
Sbjct: 229 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 288
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE-GKIWEAKKLFDEFE-RGSIPS 393
C+ G +EDA +L+ + + C +T+I LCK+ G ++ A LF++ E G P+
Sbjct: 289 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 348
Query: 394 LLTYNTLIAGMCESAELTEAGRLWD----------------------------------D 419
++TYN+LI G C++ L+EA + +D D
Sbjct: 349 IVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLED 408
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL--YES 477
M G P V TY LI GFCK G K + E+M GC PN F+ LI+GL E
Sbjct: 409 MKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAER 468
Query: 478 GNEG 481
N+G
Sbjct: 469 ANDG 472
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 189/382 (49%), Gaps = 11/382 (2%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A R E A++ F ++ V+ + S + LL+AL + R H +F P++
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS----AMTCSPDIM 209
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N+L+ CK A ++ E+ G PN+ T++ I+ Y +E A VF +
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 269
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++ VP+A T+ L+ G+ K G L DA+K+ EME G + VTY +I++ CK K+
Sbjct: 270 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK-KRG 328
Query: 307 G--EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
G A +L + + P+ +I C+ ++ +A + + + K C P+ S
Sbjct: 329 GVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYS 387
Query: 365 TIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I LCK ++ EA K ++ + G P+++TY LI G C+ EL A ++ M
Sbjct: 388 ILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLA 447
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G PN +N LI G CK A +G+R+L M +GC P+ +++ LI GL + +
Sbjct: 448 GCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 507
Query: 484 GKVVSMATASGSVESDSWNFLL 505
++ + +V ++NFL+
Sbjct: 508 QRLFDGMACAPNV--TTFNFLI 527
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 194/415 (46%), Gaps = 75/415 (18%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N LL+ LV +++D +FK PN T N+LI+ CK + A+ V +M
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGL-FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
S G++PN T T+L G G + +A ++F ++ ++P + ++ +L+ G+ GR+
Sbjct: 60 SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Query: 273 DAV---------------------------------------KVMDEMEDNGVEPNEVTY 293
DA+ + EM+ +GVEP+ +Y
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179
Query: 294 GVMIEA--------------------------------FCKGKKSGEARNLLDDMLQRKY 321
+++ A +CK ++ EA++L+ ++L+ Y
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
P+ +I+ C+ KVE+A E++ +++ NC+P+ +T+I CK G + +A K
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCES-AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
LF E E+ G +++TYNTLI +C+ + A L++ + G+ P + TYN LIQGF
Sbjct: 300 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 359
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
C E ++ +EM K C PN ++S+LI+GL + E K + A G
Sbjct: 360 CDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 11/377 (2%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
++YH ++ L+ + +L + + +P+I + ++ Y G+ A
Sbjct: 177 ESYHILLSALSDSGRMAEAHALFSAMTCSPDIM----TYNVLMDGYCKIGQTYEAQSLMK 232
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
I K + +V + + ++N + + + +F VPN T N LI CK
Sbjct: 233 EILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES-NCVPNAVTFNTLIAGFCKA 291
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW-RGDIENAKRVFGDILDRGWVPDATT 257
+E AI++ EM +G +VT+ T++ RG + A +F + G P T
Sbjct: 292 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 351
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L+ G+ RL++A++ DEME PN +TY ++I+ CK ++ EA L+DM
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
Y P+ +I+ C+ G+++ A ++++ C P+ I +T+I LCK +
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470
Query: 378 EAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+ +L G P ++TYN LI+G+C + + +A RL+D M PNV T+N LI
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLI 527
Query: 437 QGFCKIGNAKEGIRILE 453
+G C +E IL+
Sbjct: 528 RGLCAQKKVEEARNILD 544
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +LF E G P+ TYN LI G C+ ++ +A ++ DM G+ PN T N L+
Sbjct: 15 QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 74
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGS 495
G C+IG +++ EM P S ++L+ G + +G + + M +S S
Sbjct: 75 LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSS 134
Query: 496 VESDSWNFLL 505
V + ++N +L
Sbjct: 135 VATGTYNLVL 144
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%)
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N L++G+ + + +A RL+ +++ PN TYN+LI+GFCK G + + + +M
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR 507
G PN ++ + L+ GL E G K+ A + + + + +L R
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLR 110
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 221/472 (46%), Gaps = 55/472 (11%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKL--------ARA---------RAFDAVESLLT 102
AL+ F AG F H ++Y + H L AR+ R F +
Sbjct: 111 ALKFFKEAGA-RAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCDFFDM 169
Query: 103 ELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ G +F T+ G E A + F ++ KF V VRS N LL+ L ++
Sbjct: 170 LWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKS 229
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+ L FK+ + P+VFT N++I L ++ D+E A + +EM + G+ P++VT
Sbjct: 230 SKGGLALSFFKDMVVA-GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVT 288
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ +++ GY G + A VF ++ D G PD TY L++ + K R+ A + + M+
Sbjct: 289 YNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMK 348
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS----SALC---CKVIDL- 334
G++PN VTY +I+AFCK EA DM++ P+ ++L CK+ DL
Sbjct: 349 QRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLN 408
Query: 335 ---------------------------LCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
LCE+G++ +A EL+ LL+ + I +++
Sbjct: 409 EAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLF 468
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
H K + +A + +E + ++ P LL Y T I G+C E+ ++ + +M++ G+
Sbjct: 469 HGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLT 528
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
N + Y LI + K+G E + +L+EM D G ++ +LI+GL + G
Sbjct: 529 ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIG 580
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 201/412 (48%), Gaps = 17/412 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ +I LAR +A SL E+K P+I + ++I YG G AV
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVT----YNSLIDGYGKVGMLTGAVSV 308
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILI 192
F ++ + V + N+L+N + +R ++ +H M + PNV T + LI
Sbjct: 309 FEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ-----PNVVTYSTLI 363
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
A CK + A + +M +G+ PN T+T+++ GD+ A ++ ++ G
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
+ TYT L+DG + GR+ +A ++ + G N+ Y + + K K +A ++
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDI 483
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L++M ++ P L I LC + ++ED+ + + ++ ++ I +T+I K
Sbjct: 484 LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFK 543
Query: 373 EGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
GK EA L E + I +++TY LI G+C+ + +A R +D M G++PN+
Sbjct: 544 VGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMI 603
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
Y LI G CK +E + EMLDKG P+K ++ LI+G + GN GE
Sbjct: 604 YTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEA 655
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 187/401 (46%), Gaps = 6/401 (1%)
Query: 62 QIFHYA-GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITV 120
Q F Y G N TY ++I +A ++ + ++ E + ++
Sbjct: 339 QAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIR-VGLQPNEFTYTSL 397
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS-RHKF 179
I G A K +++ V ++ + LL+ L ++ R +F + +
Sbjct: 398 IDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ ++T L K +E A+ +L+EM + P+L+ + T + G + +IE++
Sbjct: 458 TLNQQIYTS--LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDS 515
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
V +++D G ++ YT L+D Y K+G+ T+AV ++ EM+D G++ VTYGV+I+
Sbjct: 516 MAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDG 575
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK +A D M + P+ + +ID LC+ +E+A L+ +L K PD
Sbjct: 576 LCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +++I K G EA L + E G L Y +LI G ++ A L D
Sbjct: 636 KLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLD 695
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+M+ KG+ P+ L++ + ++G+ E + + ++M +G
Sbjct: 696 EMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
N Q + + A + K D++ M +K + P++ I LC+++++E
Sbjct: 459 LNQQIYTSLFHGYIKAKMMEKAMDILEEM-----NKKNLKPDLLLYGTKIWGLCRQNEIE 513
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
++ V+ EM G+ N +TT++ Y G A + ++ D G TY VL+
Sbjct: 514 DSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
DG K+G + AV+ D M NG++PN + Y +I+ CK EA+NL ++ML +
Sbjct: 574 DGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS 633
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P + +ID + G +A L R++ D +++I + G++ AK L
Sbjct: 634 PDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSL 693
Query: 383 FDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
DE R G IP + L+ E ++ EA L DDM +G+
Sbjct: 694 LDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 1/278 (0%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P T+ V G +E A++ F + +P + L+ K + A+
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+M G+ P+ TY ++I + AR+L ++M + P +ID +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLT 396
G + A +++ + C PD +++I+ CK +I +A + L +RG P+++T
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+TLI C++ L EA + + DM+ G++PN FTY LI CKIG+ E ++ EM
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G N +++ L++GL E G E ++ +G
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 160/298 (53%), Gaps = 1/298 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T N LI LC++ V A+ VLD+M G P++VT+ +L A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ + G P+ TY VLMDG G + DA++++ + +G +P+ V Y +++
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C ++ G+A L+ +ML+ P+ A VI LC +G ++ A +L +++ + C +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ II+ LC++ + A L + + G P ++TYNTL+ G+C +A +A L D+
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M + G P+ T+N LI C+ G + I + ++M DKGC PN ++S +I GL ++
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 174/369 (47%), Gaps = 44/369 (11%)
Query: 149 VRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V + N LL A + + Y +L+ LM PN T N+L+ +C + DV+ A
Sbjct: 42 VVTYNILLEATCKGRGYRQAMELIDLMRAEG-----CTPNNVTYNVLMDGMCGEGDVDDA 96
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L +PS G P+ V + T+L G +A + ++L P+ T+ V++
Sbjct: 97 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ G L A++++++M +G N VTY +I C+ + A LL M P
Sbjct: 157 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
++ LC + DA EL + + C+PDN +T+I +LC++G + +A ++F
Sbjct: 217 IVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK 276
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK-------------------- 423
+ ++G P+ +TY+T+I+G+ ++ +L +A L+++M K
Sbjct: 277 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDT 336
Query: 424 --------------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
G+ P+ YN ++ G C+ G + I I+ M+ GC P+ ++ +
Sbjct: 337 IEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVI 396
Query: 470 LIEGLYESG 478
LIEGL G
Sbjct: 397 LIEGLAYEG 405
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 152/314 (48%), Gaps = 2/314 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P+V T NIL++A CK A+ ++D M + G PN VT+ ++ G GD+++A
Sbjct: 39 APDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALE 98
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++ G P Y ++ G R DA +++ EM PNE T+ V+I + C
Sbjct: 99 LLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLC 158
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ +A LL+ M + + +I+ LCE+ V+ A L ++ C PD
Sbjct: 159 RKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIV 218
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T++ LC + +A++L D + G +P +T+NTLI +C+ + +A ++ M
Sbjct: 219 TYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 278
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+KG PN TY+ +I G K + + + EM KG P+K + LL E L +
Sbjct: 279 PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTI 337
Query: 481 GEVGKVVSMATASG 494
E + V SG
Sbjct: 338 EEAIQTVRKLQDSG 351
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 145/320 (45%), Gaps = 40/320 (12%)
Query: 81 YHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y++++ L A + + L+TE L++N E F VI + G + A++ +
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLREN--CPPNEATFNVVIYSLCRKGLLQQAIQLLEK 172
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ K ++ + N ++N L + + D + L+ K + K P++ T N L+K LC
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCK--PDIVTYNTLLKGLCSA 230
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
A ++D M G +P+ VT T++G +G + +A VF + D+G P++ TY
Sbjct: 231 ARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITY 290
Query: 259 TVLMDGYIKLGRLTDAVKVMDEM----------------------------------EDN 284
+ ++ G K +L A+++ +EM +D+
Sbjct: 291 STIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDS 350
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ P+ V Y ++ C+ K+ A +++ M+ +P +I+ L EG + +A
Sbjct: 351 GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 410
Query: 345 CELWKRLLRKNCMPDNAISS 364
EL +L ++ + ++ I S
Sbjct: 411 RELLIKLCSRDVLVNSLIKS 430
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
P+ + +IH LC+ G++ +A + D+ RG P ++TYN L+ C+ +A L
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
D M +G PN TYN+L+ G C G+ + + +L + GC P+ +++ +++GL
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 477 SGNEGEVGKVVS 488
+ G+ ++V+
Sbjct: 125 AERWGDADELVT 136
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 120/290 (41%), Gaps = 42/290 (14%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRP 130
N N T++ +I+ L R LL ++ ++ C N+ + +I
Sbjct: 142 NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH---GCTANIVTYNAIINGLCEQRNV 198
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCN 189
+ A+ +++ + + + + NTLL L R+ D LM +++ +P+ T N
Sbjct: 199 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNG--CLPDNVTFN 256
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI LC+K + AI V +MP G PN +T++TI+ G ++ A +F ++ +
Sbjct: 257 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 316
Query: 250 GWVPD----------------------------------ATTYTVLMDGYIKLGRLTDAV 275
G+ PD Y ++ G + G+ A+
Sbjct: 317 GFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 376
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+M M +G P+++TY ++IE EAR LL + R + +S
Sbjct: 377 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNS 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+ TYN LI +CE ++ +A + DDM+ +G P+V TYN+L++ CK ++ + +
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLLTRIVS 510
++ M +GC PN ++++L++G+ G+ + +++ + G S ++N +L + S
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 511 DLDSGAG--ALDELLVKNC 527
G + E+L +NC
Sbjct: 125 AERWGDADELVTEMLRENC 143
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+++ + Q+N+D A+ + + P+ TY++++ L A + E L+ +
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIV----TYNTLLKGLCSAARWVDAEELMDNM 243
Query: 105 KQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
QN + +N+ F T+I G A++ F ++ + + +T+++ L +
Sbjct: 244 TQNGCLP--DNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 301
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ D +F HK ++ +L + L D +E AI+ + ++ G+ P+ V +
Sbjct: 302 KLDQALELFNEMGHKGFNPDKIY--QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
IL G G E A + ++ G +PD TY +L++G G L +A +++
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
V+PN +TYN LI C+ G ++ + +L++ML +GC P+ ++++L+E + +
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 485 KVVSMATASGSVESD-SWNFLLTRIVSDLDSGAGALDELL 523
+++ + A G ++ ++N L+ D G G +D+ L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLM-----DGMCGEGDVDDAL 97
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 214/444 (48%), Gaps = 20/444 (4%)
Query: 43 YPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLT 102
Y +RL S I + D A+ +F + P + + +AR + +D V L
Sbjct: 40 YRERLRSGIVDIKEDD-AVDLFQEMTRSRPR--PRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 103 ELKQNPEIK-CGENLF-ITVIRNYGLAGRP-ELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
++ E+K NL+ ++++ N R LA +I K + + +TL+N L
Sbjct: 97 QM----ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 160 VQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
R +LV M + HK P + T N L+ LC V A+ ++D M G
Sbjct: 153 CLEGRVSEALELVDRMVEMG-HK----PTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
PN VT+ +L G A + + +R DA Y++++DG K G L +A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ +EME G + + + Y +I FC + + LL DM++RK P +ID
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSL 394
+EGK+ +A EL K ++++ PD +++I CKE ++ +A + D +G P++
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T+N LI G C++ + + L+ M +GV + TYN LIQGFC++G + + +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 455 MLDKGCFPNKTSFSLLIEGLYESG 478
M+ + P+ S+ +L++GL ++G
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNG 471
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/557 (24%), Positives = 254/557 (45%), Gaps = 86/557 (15%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR--- 92
+P P+ + RL S++ R + DL L + +HN T +I+ R R
Sbjct: 67 RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME--LKGIAHNLYTLSIMINCCCRCRKLS 124
Query: 93 -AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
AF A+ ++ +L P+ F T+I L GR A++ R+ + + ++ +
Sbjct: 125 LAFSAMGKII-KLGYEPDTVT----FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 152 LNTLLNALVQN-KRYDLVHLMFKNSRHKFKVVPNVFT--------C-------------- 188
LN L+N L N K D V L+ + F+ PN T C
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQ--PNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 189 -------------NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+I+I LCK ++ A + +EM G +++ +TT++ G+ + G
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ ++ D++ R PD ++ L+D ++K G+L +A ++ EM G+ P+ VTY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ FCK + +A ++LD M+ + P+ +I+ C+ ++D EL++++ +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT------------------ 396
+ D +T+I C+ GK+ AK+LF E R P +++
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 397 -----------------YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
YN +I GMC ++++ +A L+ + KGV+P+V TYN++I G
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVES 498
CK G+ E + +M + G PN ++++LI G+ + K++ G SV++
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Query: 499 DSWNFLLTRIVSDLDSG 515
+ F L+ + L +G
Sbjct: 598 STLRFALSTLARMLKAG 614
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 194/454 (42%), Gaps = 62/454 (13%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y II L + + D +L E++ K ++ T+IR + AGR + K +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
K + V + + L++ V+ + + K + + P+ T LI CK++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQ 367
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A +LD M S G PN+ T ++ GY I++ +F + RG V D TY
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ +LG+L A ++ EM V P+ V+Y ++++ C + +A + + + + K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA- 379
+ +I +C KV+DA +L+ L K PD + +I LCK+G + EA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 380 ----------------------------------KKLFDEFER----------------- 388
KL +E +R
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTL 607
Query: 389 ------GSIPSLLTYNTLIAGMC--ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
G P + T+ TL+ C E+A + +A L+ +M G +PNV TYN +I+G
Sbjct: 608 ARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLL 667
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ +L++M ++GC PN + S I GL
Sbjct: 668 NGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 173/382 (45%), Gaps = 24/382 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY S+I + D +L + CG N+ F +I Y A + ++ F
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKG---CGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ V + NTL+ + + ++ +F+ + +V P++ + IL+ LC
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCD 469
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E A+ + +++ M ++ + I+ G +++A +F + +G PD T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +++ G K G L++A + +ME++G PN TY ++I A + ++ L++++
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Query: 318 QRKY-VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE--G 374
+ + V +S L A R+L+ PD +T++ C E
Sbjct: 590 RCGFSVDASTL--------------RFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENA 635
Query: 375 KIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+++A LF + G P+++TYNT+I G+ +++ + D M E+G +PN T +
Sbjct: 636 SVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKS 695
Query: 434 MLIQGFCKIGNAKEGIRILEEM 455
I G CK I +L +M
Sbjct: 696 TFISGLCKQDLHGSAILLLRKM 717
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
DAV + EM + P + + + + K+ +L M + + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
+ C K+ A ++++ PD ST+I+ LC EG++ EA +L D E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+L+T N L+ G+C + ++++A L D MVE G +PN TY +++ CK G + +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L +M ++ + +S++I+GL + G+
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 32/303 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+++I + + L E+ + P+I + L + N G PE A++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN----GEPEKALEI 479
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +IEK ++ + N +++ + + D +F + K V P+V T NI+I LC
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGLC 538
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD-------IENAKR-------- 241
KK + A + +M G PN T+ ++ ++ GD IE KR
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 242 -------VFGDILDRGWVPDATTYTVLMDGYI--KLGRLTDAVKVMDEMEDNGVEPNEVT 292
+L G PD T+T L+ + + + DA + M+ G +PN VT
Sbjct: 599 TLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVT 658
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I+ G + +LD M +R P++ I LC++ A L +++
Sbjct: 659 YNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718
Query: 353 RKN 355
N
Sbjct: 719 NDN 721
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYN 398
K +DA +L++ + R P S + + + + L + E +G +L T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
+I C +L+ A +++ G EP+ T++ LI G C G E + +++ M++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P + + L+ GL +G + ++ +G
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 221/494 (44%), Gaps = 50/494 (10%)
Query: 26 LSTITVTPP------IKPWPQRLY--PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHN 77
+ TIT + P I +P + PK +S + Q N L+L+ H+ H F +
Sbjct: 38 ICTITRSKPRWENTLISQYPSFNFSNPKFFLSYLKHQNNTFLSLRFLHWLTS-HCGFKPD 96
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+ +++ L A A A +SLL + P+ + +R G G E F
Sbjct: 97 QSSCNALFDALVDAGAVKAAKSLL----EYPDFVPKNDSLEGYVRLLGENGMVEEVFDVF 152
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK------------------------ 173
+ ++K S S N L A ++ R DLV +++
Sbjct: 153 VSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFC 212
Query: 174 ------NSRHKFKVVPNVFTC------NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
N + V C N LI CK+ + +L M +M P++
Sbjct: 213 AENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIY 272
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ I+ G + R + A RVF D+ DRG+ PD YT ++ G+ +G L +A K+ EM
Sbjct: 273 TYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEM 332
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G+ PNE TY VMI +CK + EAR L DDM R Y + +I L GK
Sbjct: 333 IQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKT 392
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
++A L+ + RK D +++I LC+EG++ +A L ++ +G PS+ ++ L
Sbjct: 393 DEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPL 452
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+ + A RL DM ++ +EP T++ +I G K G+ +G+ L +ML
Sbjct: 453 IKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKL 512
Query: 461 FPNKTSFSLLIEGL 474
PN +F LI+ L
Sbjct: 513 KPNMQTFEHLIDCL 526
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 155/349 (44%), Gaps = 52/349 (14%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW----RGDIEN 238
P+ +CN L AL V+ A +L+ P+ V L GYV G +E
Sbjct: 95 PDQSSCNALFDALVDAGAVKAAKSLLE-------YPDFVPKNDSLEGYVRLLGENGMVEE 147
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN--------- 289
VF + G++P A+++ V + +K+GR K+ + M ++GV N
Sbjct: 148 VFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCL 207
Query: 290 ----------------------------EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ +I FCK K+ +L M+ K
Sbjct: 208 IKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKC 267
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
PS ++I+ L + K ++A ++ L + PD + +T+I C G + EA+K
Sbjct: 268 NPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARK 327
Query: 382 L-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L F+ ++G +P+ TYN +I G C+ + EA +L+DDM +G NV +Y+ +I G
Sbjct: 328 LWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLY 387
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
G E + + EM KG + S++ LI+GL + EGE+ K ++
Sbjct: 388 LHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQ---EGELAKATNL 433
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENL--FITVIRNYGLAGRP 130
N TY+ +I+ + R F L ++ CG EN+ + T+I L G+
Sbjct: 340 NEYTYNVMIYGYCKVRDFAEARKLYDDM-------CGRGYAENVVSYSTMISGLYLHGKT 392
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVF 186
+ A+ F + + + R + S N+L+ L Q K +L++ + + P+V
Sbjct: 393 DEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQG-----LEPSVS 447
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ LIK LCK D EGA+R+L +M + P TH ++ G +GD +
Sbjct: 448 SFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKM 507
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
L P+ T+ L+D + RL D + V+D M G + ++ F K
Sbjct: 508 LSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGYRLEKSRICSLVTKFSK 563
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V S +T+++ L + + D +F K + ++ + N LIK LC++ ++ A +
Sbjct: 375 NVVSYSTMISGLYLHGKTDEALSLFHEMSRK-GIARDLISYNSLIKGLCQEGELAKATNL 433
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L+++ G+ P++ + T ++ GD E A R+ D+ DR P A+T+ ++ G K
Sbjct: 434 LNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSK 493
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G ++ + +M ++PN T+ +I+ + + + +LD M + Y +
Sbjct: 494 KGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGYRLEKSR 553
Query: 328 CCKVI 332
C ++
Sbjct: 554 ICSLV 558
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 230/535 (42%), Gaps = 56/535 (10%)
Query: 14 CLLQSIGGARCSLSTITVTPPIKPWPQ----------RLYPKR-----LVSMIFRQQNLD 58
C+ S+ A LS + +P P RL+P LV + L
Sbjct: 167 CVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLA 226
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI 118
AL F S + TY+++++ R +LL +K+ I +
Sbjct: 227 DALSTLSKMQGF--GLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKE-GIVPTRATYN 283
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T++ Y G + A + F + + + N L L Q + D K+ +
Sbjct: 284 TLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA-FKLKDEMEQ 342
Query: 179 FKVV-PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+V P+V T N L+ A K A+ +L+EM G+ +LVTH I+ G G +E
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLE 402
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE---------- 287
A + + G PD TY L+D K G + A +MDEM +G++
Sbjct: 403 EALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLL 462
Query: 288 -------------------------PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
P+EV+YG ++ A+ K K A L D+M++RK
Sbjct: 463 YNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLT 522
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
PS + +I L GK+ +A + L+ +PD+ + IIH CKEG + +A +
Sbjct: 523 PSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQF 582
Query: 383 FDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
++ S P ++T NTL+ G+C L +A +L++ VEKG + +V TYN LIQ CK
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCK 642
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +R +M +G P+ ++++L+ L E+G E K++ SG +
Sbjct: 643 DNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKL 697
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 227/488 (46%), Gaps = 44/488 (9%)
Query: 2 LRHLHQKITA--PSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDL 59
LRHLH+ + A P+ L A +LST RL L + +
Sbjct: 122 LRHLHRHLLASFPTSAL-----ADAALSTYA----------RLRLPHLAAQL-------- 158
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA------RAFDAVESLLTELKQNPEIKCG 113
L F G P+ ++++ LAR+ + DA SL+ L+ +P
Sbjct: 159 -LHSFRRRGCVRPSLQ----AANAVLSALARSPSTSPQASLDAFHSLIA-LRLHP----N 208
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
F ++ + G A+ T +++ F + + NTLLNA + +
Sbjct: 209 HYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA 268
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ K +VP T N L+ A + ++ A V++ M + G P+L T+ + G
Sbjct: 269 RMK-KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQA 327
Query: 234 GDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G ++ A ++ ++ G V PD TY L+D K R +DA+ +++EM + GV+ + VT
Sbjct: 328 GKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVT 387
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ ++++ C+ + EA L+ M + P +ID C+ G V A L ++
Sbjct: 388 HNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMV 447
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELT 411
R D +T+++ LCKE + EA++L +RG +P ++Y T++A + +
Sbjct: 448 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPE 507
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A LWD+M+++ + P++ TYN LI+G +G E I L E+++ G P+ T+++++I
Sbjct: 508 PALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567
Query: 472 EGLYESGN 479
+ G+
Sbjct: 568 HAYCKEGD 575
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 37/328 (11%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ FT N L+ LCK+ E A +L P G VP+ V++ T++ Y E A ++
Sbjct: 454 DTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLW 513
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+++ R P +TY L+ G +G+LT+A+ ++E+ + G+ P++ TY ++I A+CK
Sbjct: 514 DEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKE 573
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+A + M++ + P C +++ LC G++E A +L++ + K D
Sbjct: 574 GDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESA----------ELTE 412
+T+I LCK+ + A + F + E RG P + TYN L++ + E+ +L E
Sbjct: 634 NTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693
Query: 413 AGRLWD-----------DMVEKGVEPNVF---------------TYNMLIQGFCKIGNAK 446
+G+L+ + VE G +P V +YN I+ C G K
Sbjct: 694 SGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLK 753
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGL 474
E +L+EM+ KG + +++ L+EGL
Sbjct: 754 EAKAVLDEMMQKGMSVDNSTYITLMEGL 781
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 161/336 (47%), Gaps = 14/336 (4%)
Query: 158 ALVQNKRYDLVHL---MFKNSRHKFKVVPNVFTCNILIKALCKKDDV--EGAIRVLDEMP 212
AL R L HL + + R + V P++ N ++ AL + + ++ +
Sbjct: 142 ALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLI 201
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
++ + PN T ++ + +G + +A + G PDA TY L++ + + G L
Sbjct: 202 ALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLG 261
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A ++ M+ G+ P TY ++ A+ + +A ++++ M + P +
Sbjct: 262 EARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLA 321
Query: 333 DLLCEEGKVEDACELWKRLLRKNCM-PDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
LC+ GKV++A +L + + + PD +T++ K + +A L +E E+G
Sbjct: 322 AGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGV 381
Query: 391 IPSLLTYNTLIAGMCESAELTEA-GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
SL+T+N ++ G+C +L EA GRL + M E+G+ P+V TYN LI CK GN +
Sbjct: 382 KSSLVTHNIIVKGLCREGQLEEALGRL-EMMTEEGLTPDVITYNTLIDASCKAGNVAKAF 440
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL-----YESGNE 480
+++EM+ G + + + L+ L YE E
Sbjct: 441 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K K+ P++ T N LIK L + AI L+E+ MG+VP+ T+ I+ Y GD+E
Sbjct: 518 KRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLE 577
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + +++ + PD T LM+G GRL A+K+ + + G + + +TY +I
Sbjct: 578 KAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLI 637
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+A CK A DM R P ++ L E G+ +A ++ +L +
Sbjct: 638 QALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKL 697
Query: 358 PDNAISSTIIHWL--CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+I + + GK E K + +YN I +C +L EA
Sbjct: 698 YGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKA 757
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ D+M++KG+ + TY L++G K
Sbjct: 758 VLDEMMQKGMSVDNSTYITLMEGLIK 783
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 69 KFHPNFSHNYDTYHSIIHKLAR-ARAFDAVESL--LTELKQNPEIKCGENLFITVIRNYG 125
K P+ S TY+++I L+ + +A++ L L E+ P+ + + +I Y
Sbjct: 520 KLTPSIS----TYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPD----DTTYNIIIHAYC 571
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
G E A + ++ + + + V + NTL+N L R + +F++ K K V +V
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKV-DV 630
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF-- 243
T N LI+ALCK +DV+ A+R +M G+ P++ T+ +L G A+++
Sbjct: 631 ITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHK 690
Query: 244 ----GDILDRGWVP------------------------------DATTYTVLMDGYIKLG 269
G + R + P D +Y + G
Sbjct: 691 LNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGG 750
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L +A V+DEM G+ + TY ++E K +K
Sbjct: 751 QLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 229/472 (48%), Gaps = 36/472 (7%)
Query: 61 LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLF 117
+++F + G+ + H+ TY+ + LA+A A ++++ P+ + +
Sbjct: 22 VRLFDWLGR-QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPD----DFTY 76
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
V+R AG + A + ++ + V+ +V + + +++ + R D +FK
Sbjct: 77 SIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSS 136
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
VP+V T N L+K LC + + A + + M G PN+++++T+L G G ++
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A R++ +++++ VPD YT + G K R+ +A +M G + + V + +I
Sbjct: 197 EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + EA+N ++I+ LC G +++AC+ ++ ++ +N
Sbjct: 257 GILCKKGHAEEAQN------------------QMIEHLCRSGMLDEACKTFEEMISRNHP 298
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF----ERGSIPSLLTYNTLIAGMCESAELTEA 413
P + +T+IH +CK ++ + LF E P+L TYN ++ +C++ +L EA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L ++M G+ P+V TY+ L+ G CK+G +LEEM +G FP+ + + ++
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 474 LYESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLV 524
L ++G + + + +M + + ++N LL + AG +DE +
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK-----AGRIDEAIT 465
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 206/458 (44%), Gaps = 59/458 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++ L +A D + LL +L+++ +K + VI A R + A++ F
Sbjct: 75 TYSIVLRGLCKAGELDKAKELLGQLRESG-VKLNVITYSVVIDGCCKASRVDDALEIFKT 133
Query: 140 IEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ V + N+LL L +R ++F+ K PNV + + L+ LCK
Sbjct: 134 MSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEY-MAKAGCEPNVISYSTLLDGLCKA 192
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHT---------------------------------- 224
++ A R+ +EM VP+LV +T
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252
Query: 225 -TILGGYVWRGDIENAK-----------------RVFGDILDRGWVPDATTYTVLMDGYI 266
T++G +G E A+ + F +++ R P A + L+
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312
Query: 267 KLGRLTDAV---KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
K RL D V + M M++ PN TY +M++ CK K+ EA+ L+++M P
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++D LC+ GK++ AC+L + + ++ PD+ ++I++ L K GK+ A
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ + RGS P L+TYNTL+ G+C++ + EA MV P+VF+Y ++I C+
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
G A I +EM+ +G P+ + L++GL +G E
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 171/339 (50%), Gaps = 8/339 (2%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--NSRH 177
+I + +G + A KTF + N S NTL++A+ ++KR L+F+ S
Sbjct: 272 MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+F PN+ T NI++ LCK ++ A +++EM + G+ P++VT++ ++ G G ++
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + ++ G PD+ T +++ K G++ A+ ++ M+ G P+ VTY ++
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ CK + EA L M+ K P +I LC G+ A +++ ++++ +
Sbjct: 452 DGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGR 415
PD + +++ L + G + L E + S+ P + + ++ G+C++ + +A
Sbjct: 512 PDTVLYHSLLDGLARNG----LEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACE 567
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ + M + G + FTY ++ G K+G + +++++
Sbjct: 568 VVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 7/313 (2%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV---PNLVTHTTILGGYVWRGDIENA 239
P+ N LI A+CK + + + M SM PNL T+ ++ ++ A
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ + ++ + G PD TY+ L+DG KLG+L A +++EM GV P+ T ++ A
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
K K A + L+ M R P ++D LC+ G++++A +++ C PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ II LC+ G+ A +F E +RG +P + Y++L+ G+ + A L
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ K P+ + M++ G CK G A++ ++E M D G + ++ ++ GL + G
Sbjct: 539 TSLCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLG 595
Query: 479 NEGEVGKVVSMAT 491
+ ++V A+
Sbjct: 596 KVDKARQLVDDAS 608
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 48/276 (17%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V + + + LD A ++ + + S + TY +++ L + D LL E+ +
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANY--GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402
Query: 107 NPEIKCGENLF------ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
E +F +++ AG+ + A+ ++ + + NTLL+ L
Sbjct: 403 -------EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLC 455
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN- 219
+ R D + F K P+VF+ I+I ALC+ GA + EM G++P+
Sbjct: 456 KAGRIDEA-ITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDT 514
Query: 220 -------------------------------LVTHTTILGGYVWRGDIENAKRVFGDILD 248
V H +L G G E+A V + D
Sbjct: 515 VLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMAD 574
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
G+ DA TY ++ G KLG++ A +++D+ +
Sbjct: 575 AGFPADAFTYISVVSGLRKLGKVDKARQLVDDASET 610
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 215/444 (48%), Gaps = 20/444 (4%)
Query: 43 YPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLT 102
Y +RL S I + D A+ +F + P + + +AR + +D L+
Sbjct: 40 YRERLRSGIVDIKEDD-AVDLFQEMTRSRPR--PRLIDFSRLFSVVARTKQYD----LVL 92
Query: 103 ELKQNPEIK-CGENLF-ITVIRNYGLAGRP-ELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
+L + E+K NL+ ++++ N R LA +I K + + +TL+N L
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 160 VQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
R +LV M + HK P + T N L+ LC V A+ ++D M G
Sbjct: 153 CLEGRVSEALELVDRMVEMG-HK----PTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
PN VT+ +L G A + + +R DA Y++++DG K G L +A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ +EME G + + + Y +I FC + + LL DM++RK P +ID
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSL 394
+EGK+ +A EL K ++++ PD +++I CKE ++ +A + D +G P++
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T+N LI G C++ + + L+ M +GV + TYN LIQGFC++G + + +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 455 MLDKGCFPNKTSFSLLIEGLYESG 478
M+ + P+ S+ +L++GL ++G
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNG 471
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 134/552 (24%), Positives = 249/552 (45%), Gaps = 85/552 (15%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR--- 92
+P P+ + RL S++ R + DL L + +HN T +I+ R R
Sbjct: 67 RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME--LKGIAHNLYTLSIMINCCCRCRKLS 124
Query: 93 -AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
AF A+ ++ +L P+ F T+I L GR A++ R+ + + ++ +
Sbjct: 125 LAFSAMGKII-KLGYEPDTVT----FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 152 LNTLLNALVQN-KRYDLVHLMFKNSRHKFKVVPNVFT--------C-------------- 188
LN L+N L N K D V L+ + F+ PN T C
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQ--PNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 189 -------------NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+I+I LCK ++ A + +EM G +++ +TT++ G+ + G
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ ++ D++ R PD ++ L+D ++K G+L +A ++ EM G+ P+ VTY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I+ FCK + +A ++LD M+ + P+ +I+ C+ ++D EL++++ +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY----------------- 397
+ D +T+I C+ GK+ AK+LF E R P +++Y
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 398 ------------------NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
N +I GMC ++++ +A L+ + KGV+P+V TYN++I G
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
CK G+ E + +M + G PN ++++LI G+ + K++ G
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Query: 500 SWNFLLTRIVSD 511
S ++ ++SD
Sbjct: 598 STVKMVVDMLSD 609
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
DAV + EM + P + + + + K+ +L M + + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
+ C K+ A ++++ PD ST+I+ LC EG++ EA +L D E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+L+T N L+ G+C + ++++A L D MVE G +PN TY +++ CK G + +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGN 479
L +M ++ + +S++I+GL + G+
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 91/186 (48%), Gaps = 1/186 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I+ + G+ E+A + F + V+ + S LL+ L N + +F+ K
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI-EK 485
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
K+ ++ NI+I +C V+ A + +P G+ P++ T+ ++GG +G +
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F + + G P+ TY +L+ ++ G T + K+++E++ G + T ++++
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Query: 299 AFCKGK 304
G+
Sbjct: 606 MLSDGR 611
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYN 398
K +DA +L++ + R P S + + + + L + E +G +L T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
+I C +L+ A +++ G EP+ T++ LI G C G E + +++ M++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P + + L+ GL +G + ++ +G
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 222/476 (46%), Gaps = 45/476 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG-------ENLFI-TVIRNYGLAG 128
N + ++S++H ++R + L ++ IKCG N+FI ++ N L G
Sbjct: 341 NREMFNSLVHAYCKSRDYSYAYKLFKKM-----IKCGCQPGYLLYNIFIGSICSNEELPG 395
Query: 129 RP--ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
ELA K + + V + +++ L ++D + K VP+
Sbjct: 396 SDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSK-GFVPDDS 454
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T + +I LC VE A + +EM G+VP++ T+T ++ + G I+ A+ F ++
Sbjct: 455 TYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM 514
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L P+ TYT L+ Y+K ++ DA K+ + M G +PN VTY +I+ CK +
Sbjct: 515 LRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQI 574
Query: 307 GEARNL------------------LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+A + LDD P+ ++D LC+ +VE+A EL
Sbjct: 575 DKACQIYARMQGDIESSDIDMYFKLDD--NDCETPNIITYGALVDGLCKANRVEEAHELL 632
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+ C P+ + +I CK GK+ A+++F + ERG P+L TY++LI + +
Sbjct: 633 DTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKE 692
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L ++ M+E PNV Y +I G CK+G +E R++ +M + GC+PN ++
Sbjct: 693 KRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITY 752
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASGSVESDSW--NFLLTRIVSDLDSGAGALDE 521
+ +I+G G++GK+ + S NF+ R++ + G LDE
Sbjct: 753 TAMIDGF------GKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDE 802
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 203/435 (46%), Gaps = 33/435 (7%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA----VKT 136
Y+ ++ L A F +L ++ I C N+ I G G+ +L + +
Sbjct: 275 YNRMVSGLCEASLFQEAMDILDRMRS---ISCIPNVVTYRILLSGCLGKGQLGRCKRILS 331
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ E R + N+L++A +++ Y + +FK K P NI I ++C
Sbjct: 332 MMMTEGCYPNREM--FNSLVHAYCKSRDYSYAYKLFKK-MIKCGCQPGYLLYNIFIGSIC 388
Query: 197 KKDDVEG------AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+++ G A + EM +G+V N V + G + A + +++ +G
Sbjct: 389 SNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKG 448
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+VPD +TY+ ++ ++ A + +EM+ NG+ P+ TY ++I++FCK +AR
Sbjct: 449 FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
N D+ML+ P+ +I + KV DA +L++ +L + P+ + +I
Sbjct: 509 NWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGH 568
Query: 371 CKEGKIWEAKKLF----DEFERGSI-------------PSLLTYNTLIAGMCESAELTEA 413
CK G+I +A +++ + E I P+++TY L+ G+C++ + EA
Sbjct: 569 CKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA 628
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L D M G EPN Y+ LI GFCK G + + +M ++G PN ++S LI
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINS 688
Query: 474 LYESGNEGEVGKVVS 488
L++ V KV+S
Sbjct: 689 LFKEKRLDLVLKVLS 703
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 190/409 (46%), Gaps = 34/409 (8%)
Query: 73 NFSHNYDTYHSIIHKLARAR-AFDA---VESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
N + N TY S+IH +AR FDA E +L E P + + +I + AG
Sbjct: 518 NCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE-GSKPNVV----TYTALIDGHCKAG 572
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
+ + A + + R+ Q + S + + + FK + + PN+ T
Sbjct: 573 QIDKACQIYARM-----QGDIESSD--------------IDMYFKLDDNDCET-PNIITY 612
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
L+ LCK + VE A +LD M G PN + + ++ G+ G +ENA+ VF + +
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG+ P+ TY+ L++ K RL +KV+ +M +N PN V Y MI+ CK K+ E
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L+ M + P+ +ID + GK+E EL++ + K C P+ +I+
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792
Query: 369 WLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
C G + EA +L DE ++ P + +Y +I G + E + L D++ E P
Sbjct: 793 HCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVP 850
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF--PNKTSFSLLIEGL 474
Y +LI F K G + + +LEE+ NK ++ LIE L
Sbjct: 851 VESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESL 899
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 210/476 (44%), Gaps = 27/476 (5%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA-RARA 93
++ + RL +V ++ ++ + ++ F +A + +SH Y+++I L A
Sbjct: 91 LRQFRGRLSEPLVVEVMNLVKHPEFCVEFFLWASR-QIGYSHTPVVYNALIELLCCNAVN 149
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D V ++ + + L +I+ G +A++ R++ F + S + N
Sbjct: 150 NDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYN 209
Query: 154 TLLNALVQNKRYD---LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
L+ ++ + D LVH NS F++ C +LCK A+ +L++
Sbjct: 210 ALIQVFLRADKLDTAFLVHREMSNS--GFRMDGCTLGC--FAYSLCKAGRCGDALSLLEK 265
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR----GWVPDATTYTVLMDGYI 266
VP+ V + ++ G + A DILDR +P+ TY +L+ G +
Sbjct: 266 EE---FVPDTVFYNRMVSGLCEASLFQEAM----DILDRMRSISCIPNVVTYRILLSGCL 318
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
G+L +++ M G PN + ++ A+CK + A L M++ P
Sbjct: 319 GKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 378
Query: 327 LCCKVIDLLC--EEGKVEDACEL----WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
L I +C EE D EL + +L + + S LC GK +A
Sbjct: 379 LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAF 438
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
++ E +G +P TY+ +I +C+++++ +A L+++M + G+ P+V+TY +LI F
Sbjct: 439 EIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSF 498
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
CK G ++ +EML C PN +++ LI ++ + K+ M GS
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGS 554
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 226/452 (50%), Gaps = 33/452 (7%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
+K +L + ++ ++ + +Q F++ K P + HN + + S++++L R R F
Sbjct: 108 LKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISK-RPFYKHNMNCFISMLNRLVRDRVF 166
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL-RIEKFNVQRSVRSLN 153
+ + L I RN R V FL I S+ S N
Sbjct: 167 APADHIRI-------------LMIKACRNEEEIRR----VADFLNEISGMGFGFSLYSCN 209
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRV 207
TLL +Q ++++V + +R+ +K + P++ T N LI L KK V A +
Sbjct: 210 TLL---IQLAKFEMV----EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 262
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L ++ + P++ T+T+++ G+ +++ A VF ++ G P++ TY+ L++G
Sbjct: 263 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 322
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GR+ +A+ +++EM + G+EP TY + I A C + EA L+ M +R P+
Sbjct: 323 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 382
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I L GK+E A L+ ++L++ +P+ + +I+ LC G+ A K+F E
Sbjct: 383 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 442
Query: 388 -RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
GS+ + TYN +I G+C ++ +A L++ M++ G P V TYN LI G+ GN
Sbjct: 443 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 502
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
R+L+ M + GC P++ +++ L+ G + G
Sbjct: 503 NAARLLDLMKENGCEPDEWTYNELVSGFSKWG 534
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 205/436 (47%), Gaps = 27/436 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++I L+R + L ++ + + + +I + GR A+K
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP-NTVTYNALINELCVGGRFSTALKI 437
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E + ++ N ++ L + ++F+ K +P V T N LI
Sbjct: 438 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML-KMGPLPTVVTYNTLINGYL 496
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +V A R+LD M G P+ T+ ++ G+ G +E+A F ++++ G P+
Sbjct: 497 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 556
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+YT L+DG+ K G++ A+ +++ ME+ G PN +Y +I K + EA + D M
Sbjct: 557 SYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 616
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++ +P+ +ID LC G+ + A +++ + ++ C+P+ S++I+ LC+EGK
Sbjct: 617 AEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 676
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA+ L E ER G P +T+ +LI G + A L MV+ G +PN TY++L
Sbjct: 677 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVL 736
Query: 436 IQGF---C-----KIGNAKEGI----------------RILEEMLDKGCFPNKTSFSLLI 471
++G C K+ E + +L M + GC P ++S L+
Sbjct: 737 LKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLV 796
Query: 472 EGLYESGNEGEVGKVV 487
GL G E ++V
Sbjct: 797 SGLCRKGRFYEAEQLV 812
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 194/441 (43%), Gaps = 41/441 (9%)
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
++T +I+ K + R + + S + + +P++ +L + RN L +LA F
Sbjct: 243 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL----DLAFGVF 298
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
R+ K + + +TL+N L R D M + K + P V+T + I ALC
Sbjct: 299 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPITALCA 357
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E AI ++ M G PN+ T+T ++ G G +E A ++ +L G VP+ T
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 417
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++ GR + A+K+ ME +G N TY +I+ C G +A L + ML
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ +P+ +I+ +G V +A L + C PD + ++ K GK+
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537
Query: 378 EAKKLFDEF------------------------------------ERGSIPSLLTYNTLI 401
A F E E G P++ +YN +I
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI 597
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ + +EA ++ D M E+G+ PNV TY LI G C+ G + +I +M + C
Sbjct: 598 NGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 657
Query: 462 PNKTSFSLLIEGLYESGNEGE 482
PN ++S LI GL + G E
Sbjct: 658 PNLYTYSSLIYGLCQEGKADE 678
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 191/404 (47%), Gaps = 22/404 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN----LFITVIRNYGLAGRPELAVK 135
TY+ ++ ++ ++ E+ ++CG N + T+I + G+ ++A+
Sbjct: 522 TYNELVSGFSKWGKLESASFYFQEM-----VECGLNPNPVSYTTLIDGHSKDGKVDIALS 576
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
R+E+ +V S N ++N L + R+ + + ++PNV T LI L
Sbjct: 577 LLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ-GLLPNVITYTTLIDGL 635
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ + A ++ +M +PNL T+++++ G G + A+ + ++ +G PD
Sbjct: 636 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 695
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+T L+DG++ LGR+ A ++ M D G +PN TY V+++ K E + +
Sbjct: 696 VTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH 755
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ P ++ E L R+ C P ST++ LC++G+
Sbjct: 756 EAVYSFSPHE-----------KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGR 804
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+EA++L + ERG P Y +L+ C++ E+ A +++ + KG + ++ Y
Sbjct: 805 FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRA 864
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI CK G +E + + ML+K ++ +++L++GL + G
Sbjct: 865 LICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 908
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 213/500 (42%), Gaps = 72/500 (14%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+S + R L++A+ ++H K N TY+++I++L F + ++
Sbjct: 386 LISGLSRLGKLEVAIGLYHKMLK--EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 443
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----N 162
+ + + +I+ L G E A+ F ++ K +V + NTL+N + N
Sbjct: 444 HGSL-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 502
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
L+ LM +N P+ +T N L+ K +E A EM G+ PN V+
Sbjct: 503 NAARLLDLMKENG-----CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 557
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+TT++ G+ G ++ A + + + G P+ +Y +++G K R ++A K+ D+M
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+ G+ PN +TY +I+ C+ ++ A + DM +RK +P+ +I LC+EGK +
Sbjct: 618 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 677
Query: 343 DACELWKRLLRKN-----------------------------------CMPDNAISSTII 367
+A L K + RK C P+ S ++
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737
Query: 368 HWLCKEGKIWEAKKL--------FDEFER-----------------GSIPSLLTYNTLIA 402
L KE + E K F E+ G P+L TY+TL++
Sbjct: 738 KGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C EA +L DM E+G P+ Y L+ CK ++I + KG
Sbjct: 798 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 857
Query: 463 NKTSFSLLIEGLYESGNEGE 482
+ + + LI L ++G E
Sbjct: 858 HLSIYRALICALCKAGQVEE 877
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+I +I G+ + L+ K + A + +M ++G++P+ +T+
Sbjct: 185 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 244
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I K K EA +L + Q P +I C ++ A ++ R++++
Sbjct: 245 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 304
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
C P++ ST+I+ LC EG++ EA + +E E+G P++ TY I +C EA
Sbjct: 305 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 364
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L M ++G PNV TY LI G ++G + I + +ML +G PN +++ LI
Sbjct: 365 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 424
Query: 474 LYESGNEGEVGKVVSMATASGSV 496
L G K+ GS+
Sbjct: 425 LCVGGRFSTALKIFHWMEGHGSL 447
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 156/352 (44%), Gaps = 21/352 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDA 96
P + L+ + R A +IFH K PN TY S+I+ L + D
Sbjct: 623 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY----TYSSLIYGLCQEGKADE 678
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E LL E+++ + E F ++I + + GR + A R+ + + R+ + LL
Sbjct: 679 AEILLKEMERKG-LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPSMG 215
L Q + L + + P+ +KD + E +L M +G
Sbjct: 738 KGL-QKECLLLEEKVAVQHEAVYSFSPH------------EKDVNFEIVSNLLARMSEIG 784
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P L T++T++ G +G A+++ D+ +RG+ PD Y L+ + K + A+
Sbjct: 785 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 844
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+ +E G + + Y +I A CK + EA+ L D+ML++++ + ++D L
Sbjct: 845 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+EG+++ +L + KN P+ + L + GK E++ L D+ +
Sbjct: 905 LKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 15/414 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLM 171
F ++R R A+ +R K V S LL L K+ DL+H+M
Sbjct: 51 FTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMM 110
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
++ H PNV + +I K+D+V A + EM G+ P++VT +I+ G
Sbjct: 111 AEDGDH---CPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLC 167
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
++ A+ V + D+ +PD TTY L+ GY+ G+L +AV+++ +M +G PN V
Sbjct: 168 KVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGV 227
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++I+ CK EAR +L+ M+Q + P+ A ++ +G + + L +
Sbjct: 228 TYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLM 287
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
++ PD+ I + I+ K G++ EA F++ ++G +P +++Y T+I G+C+ L
Sbjct: 288 VQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRL 347
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A + M++ G+ P++ + LI GF G ++ + EM+D+G P F+ +
Sbjct: 348 DAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTM 407
Query: 471 IEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
I+ L++ G E + M AS S+N ++ AG LDE+L
Sbjct: 408 IDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFL-----AGKLDEVL 456
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 205/452 (45%), Gaps = 27/452 (5%)
Query: 32 TPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA 91
TP + P L+ + ++ + A+ + H + + N +Y ++IH +
Sbjct: 75 TPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKE 134
Query: 92 RAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
+L E+ P++ ++ + + + E+ + F + ++
Sbjct: 135 DEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK----HIMPD 190
Query: 149 VRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+ N+L++ + + + + V ++ + SRH PN T ++LI LCK A +
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQP--PNGVTYSMLIDCLCKFGGHTEAREI 248
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L+ M PN+ T+ +L GY +GD+ + ++ G PD + + + Y+K
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVK 308
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GRL +A+ ++M G+ P+ ++YG MI+ CK + A + M+ P +
Sbjct: 309 CGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVV 368
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I GK E A EL+ ++ + P + +T+I L KEGK+ EAK LFD
Sbjct: 369 FTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP 428
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
S+ P++++YN +I G + +L E +L DDM+ G++PN T+N L
Sbjct: 429 IASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTL----------- 477
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
L++ML G P+ + + LI+ E G
Sbjct: 478 -----LDDMLSMGLKPDVATCNTLIDSCCEDG 504
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 4/307 (1%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
KV P T ILI C + A L ++ G+ N ++ T IL +A
Sbjct: 8 KVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDA 67
Query: 240 KRVFGDILDR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG--VEPNEVTYGVM 296
+ + G PD +YTVL+ G + +AV ++ M ++G PN V+Y +
Sbjct: 68 MNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTV 127
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I F K + G+A L +ML R P C +ID LC+ ++ A E+ +++ K+
Sbjct: 128 IHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHI 187
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGR 415
MPD ++++H G++ EA ++ + R G P+ +TY+ LI +C+ TEA
Sbjct: 188 MPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEARE 247
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ + M++ PNV TY L+ G+ G+ E +++ M+ G P+ F++ I
Sbjct: 248 ILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYV 307
Query: 476 ESGNEGE 482
+ G E
Sbjct: 308 KCGRLDE 314
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 178/381 (46%), Gaps = 19/381 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T +SII L + +A D E +L ++ + I + +++ Y +G+ + AV+ +
Sbjct: 158 TCNSIIDGLCKVQAMDKAEEVLRQMF-DKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQ 216
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + + L++ L + + + NS + + PNV T L+ K
Sbjct: 217 MSRHGQPPNGVTYSMLIDCLCKFGGHTEAREIL-NSMIQSRGNPNVATYGGLLHGYATKG 275
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ ++D M G+ P+ + YV G ++ A F + +G +PD +Y
Sbjct: 276 DLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYG 335
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++DG K+GRL A+ +M D+G+ P+ V + +I F K +A L +M+ R
Sbjct: 336 TMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDR 395
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ + +ID L +EGKV +A L+ + + P+ + IIH GK+ E
Sbjct: 396 GIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEV 455
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL D+ G P+ +T+NTL+ DDM+ G++P+V T N LI
Sbjct: 456 LKLLDDMLSVGLKPNAVTFNTLL----------------DDMLSMGLKPDVATCNTLIDS 499
Query: 439 FCKIGNAKEGIRILEEMLDKG 459
C+ G ++ + + EML K
Sbjct: 500 CCEDGRIEDVLTLFREMLSKA 520
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TYT+L+ +G L A + ++ G+ N +++ ++ C K++ +A N+
Sbjct: 11 PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70
Query: 313 LDDMLQRKYVPSSALCCKVIDL------LCEEGKVEDACELWKRLLR--KNCMPDNAISS 364
+ ++ P V LC+E K E+A +L + +C P+ +
Sbjct: 71 V-----IRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
T+IH KE ++ +A LF E +RG P ++T N++I G+C+ + +A + M +K
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ P+ TYN L+ G+ G KE +RIL++M G PN ++S+LI+ L + G E
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEA 245
Query: 484 GKVV-SMATASGSVESDSWNFLL 505
+++ SM + G+ ++ LL
Sbjct: 246 REILNSMIQSRGNPNVATYGGLL 268
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 24/245 (9%)
Query: 145 VQRSVRSLNTLLN----ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
VQ VR + + N A V+ R D L F R + ++P++ + +I LCK
Sbjct: 288 VQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQ-GLMPDIISYGTMIDGLCKIGR 346
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A+ +M G+ P++V T ++ G+ G E A+ +F +++DRG P +T
Sbjct: 347 LDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTT 406
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
++D K G++T+A + D M V+PN V+Y +I + K E LLDDML
Sbjct: 407 MIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVG 466
Query: 321 YVPSS-------------------ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
P++ A C +ID CE+G++ED L++ +L K D
Sbjct: 467 LKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTV 526
Query: 362 ISSTI 366
+ I
Sbjct: 527 TENII 531
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 209/448 (46%), Gaps = 19/448 (4%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYA--GKFHPNFSHNYDTYHSIIHKLARARAFD 95
WP+ L L ++ +++ AL +F A + DT + +LA A
Sbjct: 11 WPKTLTAGHLHRLVRAERDPRRALALFDAATAASVSAPILPSPDTVSLLTSRLASAGLLP 70
Query: 96 AVESLLTELKQ-NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLN 153
SLL+ + P E F+T++R + RP A++ F + S RS
Sbjct: 71 LATSLLSRSRALFPSAADLEPPFLTLLRAFSRTHRPLAALQLFRSAPSALALPHSARSYT 130
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD--VEGAIRVLDEM 211
+L LV + L H + + R P T N+L+KA C +E A+R+ +
Sbjct: 131 AVLATLVSHSHLPLAHSLLADMRAG-GFAPTTATYNVLLKAHCSDASAPIEDAVRLFRNI 189
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
P P+ ++ T++ G R +A+ +F +++ G P TYT +++ + G L
Sbjct: 190 PK----PDACSYNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLARDGCL 245
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
DA+K+ DEM G+ PN VTY +I+ CKG ++ A LLD M + +P++ V
Sbjct: 246 DDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLPNTITYSSV 305
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGS 390
I+ LC+E ++ +A E+ R+ + PD + +I LC G+ EA DE G
Sbjct: 306 INGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYLDEMVLSGV 365
Query: 391 IPSLLTY-------NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
P+ +T+ + ++ +C E R++ M +G+ T+++L++ F K
Sbjct: 366 EPNRVTWSLHVRINDAVVTALCAKGEAGRTFRVYQSMRTRGISTEPGTFHLLVEFFSKKN 425
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+ ++ ++ +ML + C P + ++ +++
Sbjct: 426 DLEKAAHVVLDMLSEKCIPERETWDIIL 453
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 9/244 (3%)
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
A +YT ++ + L A ++ +M G P TY V+++A C +A ++
Sbjct: 126 ARSYTAVLATLVSHSHLPLAHSLLADMRAGGFAPTTATYNVLLKAHC-----SDASAPIE 180
Query: 315 DMLQR-KYVPSSALCC--KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
D ++ + +P C VID LC + DA E++ ++ P +T+I+WL
Sbjct: 181 DAVRLFRNIPKPDACSYNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLA 240
Query: 372 KEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
++G + +A K+FDE R G P+++TY++LI G+C+ A L D M ++ PN
Sbjct: 241 RDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLPNTI 300
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY+ +I G CK E + +L+ M +G P+ F LI GL +G E +
Sbjct: 301 TYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYLDEM 360
Query: 491 TASG 494
SG
Sbjct: 361 VLSG 364
>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
Length = 757
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 224/457 (49%), Gaps = 24/457 (5%)
Query: 58 DLALQIFHYA---GKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+LALQ F +A G F P+ DT+ ++ LA R + L+ + + + E
Sbjct: 126 ELALQFFRFAYRRGGFRPD----GDTFALLVPALASRRMLNHARCLVLDTMPSFSVAPDE 181
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+I YG A P+ AVK F + V R+ S N +L A++ R + ++ N
Sbjct: 182 PTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAILCRGREAMARRIY-N 240
Query: 175 SRHKFKVVPNVFTCNILI--KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ V P+V T N LI LCKK +E A+RV EM G+ P++ T+ +L +V
Sbjct: 241 AMIADGVAPDVSTYNTLIWGFGLCKK--METAVRVFGEMKGHGVTPDVTTYNALLNAWVR 298
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
GD+E+A++VF ++ +G ++ +Y V++ GY++ R+ +AV + EM + G+ +E T
Sbjct: 299 TGDLESARKVFDEMTGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGEKGLRLSEKT 358
Query: 293 YGVMIEAFCKGK-KSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKR 350
+ ++ C + ++ EAR +DDM +R+ P ++ +++ LC+ G ++ A E+ ++
Sbjct: 359 FAALMPGLCDDQGRAAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHRK 418
Query: 351 LLR-KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS-------LLTYNTLI 401
+ K+ + D ++ LC GK A ++ DE E+G++ S YN +I
Sbjct: 419 SGQFKHVLVDPRQYGVLMEGLCAGGKSEMAIEVLDELMEKGTLLSPKSPVLEASAYNPVI 478
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+C + T+A + +++KGV+ +N LI+G K G + IL M +
Sbjct: 479 EHLCSNGSTTKAETFFRQLMKKGVDDKA-AFNSLIRGHAKEGVPEAAQEILAIMTRREVP 537
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ S LL++ + + + G + S
Sbjct: 538 TDPESHVLLVDSFLKKNEPADAKTALDSMMQHGHLPS 574
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 180/400 (45%), Gaps = 16/400 (4%)
Query: 120 VIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
VI AGR ELA++ F + + + L+ AL + + + ++
Sbjct: 115 VISGAASAGRAELALQFFRFAYRRGGFRPDGDTFALLVPALASRRMLNHARCLVLDTMPS 174
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F V P+ T LI A + + A+++ MP +G+ +++ +L + RG
Sbjct: 175 FSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAILCRGREAM 234
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+R++ ++ G PD +TY L+ G+ ++ AV+V EM+ +GV P+ TY ++
Sbjct: 235 ARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGEMKGHGVTPDVTTYNALLN 294
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A+ + AR + D+M + +S +I E +VE+A L+ + K
Sbjct: 295 AWVRTGDLESARKVFDEMTGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGEKGLRL 354
Query: 359 DNAISSTIIHWLC-KEGKIWEAKKLFDEF-ERGSIPSLLT-YNTLIAGMCESAELT---E 412
+ ++ LC +G+ EA+K D+ ER P + + L+ +C++ +L E
Sbjct: 355 SEKTFAALMPGLCDDQGRAAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALE 414
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS------ 466
R V+P Y +L++G C G ++ I +L+E+++KG + S
Sbjct: 415 VHRKSGQFKHVLVDPR--QYGVLMEGLCAGGKSEMAIEVLDELMEKGTLLSPKSPVLEAS 472
Query: 467 -FSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
++ +IE L +G+ + G + ++N L+
Sbjct: 473 AYNPVIEHLCSNGSTTKAETFFRQLMKKGVDDKAAFNSLI 512
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 142/299 (47%), Gaps = 16/299 (5%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN---------AK 240
+L++ LC E AI VLDE+ G + L + +L + IE+ A+
Sbjct: 434 VLMEGLCAGGKSEMAIEVLDELMEKGTL--LSPKSPVLEASAYNPVIEHLCSNGSTTKAE 491
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
F ++ +G V D + L+ G+ K G A +++ M V + ++ +++++F
Sbjct: 492 TFFRQLMKKG-VDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHVLLVDSF 550
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K + +A+ LD M+Q ++PS AL V++ L +G+++ A + K ++ K +
Sbjct: 551 LKKNEPADAKTALDSMMQHGHLPSPALFKSVMEALFNDGRIQTASRVMKSMIEKGVTENM 610
Query: 361 AISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++ I+ L G + EA ++ E G +P L + L+ G+C++ + EA +L D
Sbjct: 611 DMAHKILEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLLVGLCDNDRVMEAQKLADF 667
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+++ + + TY+ +++ +L ++ +KG ++ L+E L G
Sbjct: 668 ALDRDFDVSFSTYDRVLEALYAEEKTLPAYSMLCKIKNKGGVVDQKGCDALMESLKSEG 726
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 11/278 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
Y+ +I L + E+ +L K+ + K F ++IR + G PE A +
Sbjct: 473 AYNPVIEHLCSNGSTTKAETFFRQLMKKGVDDKAA---FNSLIRGHAKEGVPEAAQEILA 529
Query: 139 RIEKFNVQRSVRSLNTLLNA-LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + V S L+++ L +N+ D + +H P +F +++AL
Sbjct: 530 IMTRREVPTDPESHVLLVDSFLKKNEPADAKTALDSMMQHGHLPSPALFKS--VMEALFN 587
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
++ A RV+ M G+ N+ IL RG +E A +++ G +PD
Sbjct: 588 DGRIQTASRVMKSMIEKGVTENMDMAHKILEALFTRGHVEEAIGRVNLMVENGCMPDLDK 647
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ G R+ +A K+ D D + + TY ++EA +K+ A ++L +
Sbjct: 648 ---LLVGLCDNDRVMEAQKLADFALDRDFDVSFSTYDRVLEALYAEEKTLPAYSMLCKIK 704
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ V C +++ L EG + A ++ R+L +N
Sbjct: 705 NKGGVVDQKGCDALMESLKSEGYSKQA-DILSRILAEN 741
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 164/309 (53%), Gaps = 19/309 (6%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P + T N LI C++ ++E A +L +M + G+ ++VT+ T++ G G ++ A+++
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ G PD Y+ + G K G++ DA +V+++M D+ +PN VTY +++ CK
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALC-------CKVIDLLCEEGKVEDACELWKRLLRKN 355
K A +++ M SS C V+D LC+ G+ ++A + + + R
Sbjct: 270 SGKIDTALEMMEQM------ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
C PD S++++ LCK GKI EA + E G P+ +TY +L+ G+C L EA
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 415 RLWDDMVEKG-----VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
R+ ++M G P+V TYN LI G CK G + ++ + M +GC P+ S+S
Sbjct: 384 RMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443
Query: 470 LIEGLYESG 478
++EGL SG
Sbjct: 444 IVEGLARSG 452
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 201/405 (49%), Gaps = 13/405 (3%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
+L + G+ P+ TY +++ +A + LL E+ ++ ++
Sbjct: 66 ELVRDMISRGGRSTPDMV----TYSTLLSGYCKAGKVEESRELLKEVISRG-LRPDALMY 120
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
V+ + + R A++ + + ++ + NTL++ + K ++ + +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
V +V T N L+ LCK ++ A ++L+ M + G P++V +++ + G G +
Sbjct: 181 S-GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVM 296
+A +V + D P+ TY ++DG K G++ A+++M++M +G N V Y +
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++ CK ++ EAR++++ M + P +++ LC+ GK+E+A E + + + C
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI------PSLLTYNTLIAGMCESAEL 410
P+ +++H LC G++ EA+++ +E G PS+ TYN LI G+C++ +
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRI 419
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+A + + M +G +P+ +Y+ +++G + G A + IL E+
Sbjct: 420 DDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 180/374 (48%), Gaps = 3/374 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++ + GRP + + ++Q +V S N LL L + +R+ + ++
Sbjct: 13 FNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72
Query: 177 HKF-KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + P++ T + L+ CK VE + +L E+ S G+ P+ + +T ++
Sbjct: 73 SRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSAR 132
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + +++ G P T+ L+ G + L A ++ +M +GV+ + VTY
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNT 192
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ CK + EA LL+ M P + LC+ GKV DA ++ +++ +
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSH 252
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEA 413
P+ +TI+ LCK GKI A ++ ++ G +++ Y+T++ G+C+ EA
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ + M G P+V TY+ L+ G CK G +E + + EM +GC PN ++ L+ G
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372
Query: 474 LYESGNEGEVGKVV 487
L G E ++V
Sbjct: 373 LCSCGRLAEAERMV 386
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 175/348 (50%), Gaps = 40/348 (11%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T N L+ K+ R+L+ M + + PN+V++ +L G A+ +
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 243 FGDILDRGW--VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
D++ RG PD TY+ L+ GY K G++ ++ +++ E+ G+ P+ + Y ++ +
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127
Query: 301 CKGKKSGEARNLLDDMLQRKYVPS-------SALCCK----------------------- 330
CK + GEA LL++M++ P+ + CC+
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187
Query: 331 -----VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
++D LC+ G++++A +L +R+ C PD S+ ++ LCK GK+ +A ++ ++
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK-GVEPNVFTYNMLIQGFCKIG 443
+ P+++TYNT++ G+C+S ++ A + + M G NV Y+ ++ G CK+G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMA 490
+E ++E M GC P+ ++S L+ GL ++G E V V MA
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 4/236 (1%)
Query: 247 LDR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+DR G P++ T+ L++G+ K GR D ++++ M ++PN V+Y ++E CK ++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 306 SGEARNLLDDMLQR--KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
EA L+ DM+ R + P ++ C+ GKVE++ EL K ++ + PD +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ ++ LCK ++ EA +L +E R G P+L+T+NTLI+G C L A L M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GV+ +V TYN L+ G CK G +E ++LE M GC P+ ++S + GL +SG
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 224/454 (49%), Gaps = 20/454 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F H+ +T+ II L RA + +L ++ + ++ E+L++
Sbjct: 28 ALQFFRWVERSNL-FQHDRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDLWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S + L +++ R+ + F N
Sbjct: 86 MIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYF-NKMLNE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A ++M S + P+++T+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+R F ++ R P TYT L+ GY+ + R+ DA+ +M+EM+ G++PN +TY ++
Sbjct: 205 ERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EA+++L +M+ + P+ +++ K+I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK K +A L D+ I PS YN +I +C++
Sbjct: 325 EAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDIILRPQSTLHMEPS--AYNPMIEYLCDN 382
Query: 408 AELTEAGRLWDDMVEKGV-EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV EP N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQTAKAETLVRQLMKLGVQEPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+ L++ + + + +G + S
Sbjct: 441 YDSLVQSYLKKNEPADAKAALDSMIENGHLPDSS 474
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 44/309 (14%)
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
TH I+ + +A+ + D+ +G D + +++D Y K G + ++VK+ +M
Sbjct: 47 THLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKKGIVQESVKLFQKM 106
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E+ GVE +Y + + + + M+ ++Y
Sbjct: 107 EELGVERTIKSYDALFKVILRRGRF---------MMAKRY-------------------- 137
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTL 400
+ ++L + P + +I GK+ A F++ + R P ++TYNTL
Sbjct: 138 ------FNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTL 191
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G ++ EA R + +M + +EP V TY LI+G+ + + + ++EEM G
Sbjct: 192 INGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGFGI 251
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS------DLDS 514
PN ++S L+ GL + E ++ +D+ FL +++S +LD+
Sbjct: 252 KPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFL--KLISGQCKAGNLDA 309
Query: 515 GAGALDELL 523
A L ++
Sbjct: 310 AADVLKAMI 318
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 229/472 (48%), Gaps = 36/472 (7%)
Query: 61 LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLF 117
+++F + G+ + H+ TY+ + LA+A A ++++ P+ + +
Sbjct: 22 VRLFDWLGR-QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPD----DFTY 76
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH 177
V+R AG + A + ++ + V+ +V + + +++ + R D +FK
Sbjct: 77 SIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSA 136
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
VP+V T N L+K LC + + A + + M G PN+++++T+L G G ++
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A R++ +++++ VPD YT + G K R+ +A +M G + + V + +I
Sbjct: 197 EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
CK + EA+N ++I+ LC G +++AC+ ++ ++ +N
Sbjct: 257 GILCKKGHAEEAQN------------------QMIEHLCRSGMLDEACKTFEEMISRNHP 298
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEF----ERGSIPSLLTYNTLIAGMCESAELTEA 413
P + +T+IH +CK ++ + LF E P+L TYN ++ +C++ +L EA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L ++M G+ P+V TY+ L+ G CK+G +LEEM +G FP+ + + ++
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 474 LYESGN-EGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLV 524
L ++G + + + +M + + ++N LL + AG +DE +
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK-----AGRIDEAIT 465
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 206/458 (44%), Gaps = 59/458 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++ L +A D + LL +L+++ +K + VI A R + A++ F
Sbjct: 75 TYSIVLRGLCKAGELDKAKELLGQLRESG-VKLNVITYSVVIDGCCKASRVDDALEIFKT 133
Query: 140 IEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ V + N+LL L +R ++F+ K PNV + + L+ LCK
Sbjct: 134 MSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEY-MAKAGCEPNVISYSTLLDGLCKA 192
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHT---------------------------------- 224
++ A R+ +EM VP+LV +T
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252
Query: 225 -TILGGYVWRGDIENAK-----------------RVFGDILDRGWVPDATTYTVLMDGYI 266
T++G +G E A+ + F +++ R P A + L+
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312
Query: 267 KLGRLTDAV---KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
K RL D V + M M++ PN TY +M++ CK K+ EA+ L+++M P
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++D LC+ GK++ AC+L + + ++ PD+ ++I++ L K GK+ A
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ + RGS P L+TYNTL+ G+C++ + EA MV P+VF+Y ++I C+
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
G A I +EM+ +G P+ + L++GL +G E
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 172/339 (50%), Gaps = 8/339 (2%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--NSRH 177
+I + +G + A KTF + N S NTL++A+ ++KR L+F+ S
Sbjct: 272 MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+F PN+ T NI++ LCK ++ A +++EM + G+ P++VT++ ++ G G ++
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + ++ G PD+ T +++ K G++ A+ ++ M+ G P+ VTY ++
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
+ CK + EA L M+ K P +I LC G+ A +++ ++++ +
Sbjct: 452 DGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGR 415
PD + +++ L + G + L E + S+ P + + ++ G+C++ + +A
Sbjct: 512 PDTVLYHSLLDGLARNG----LEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACE 567
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ + M + G + FTY +++G K+G + +++++
Sbjct: 568 VVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 7/315 (2%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV---PNLVTHTTILGGYVWRGDIENA 239
P+ N LI A+CK + + + M SM PNL T+ ++ ++ A
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ + ++ + G PD TY+ L+DG KLG+L A +++EM GV P+ T ++ A
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
K K A + L+ M R P ++D LC+ G++++A +++ C PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ II LC+ G+ A +F E +RG +P + Y++L+ G+ + A L
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ K P+ + M++ G CK G A++ ++E M D G + ++ ++ GL + G
Sbjct: 539 TSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLG 595
Query: 479 NEGEVGKVVSMATAS 493
+ ++V A+ +
Sbjct: 596 KVDKARQLVDDASET 610
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 110/276 (39%), Gaps = 48/276 (17%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V + + + LD A ++ + + S + TY +++ L + D LL E+ +
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANY--GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402
Query: 107 NPEIKCGENLF------ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
E +F +++ AG+ + A+ ++ + + NTLL+ L
Sbjct: 403 -------EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLC 455
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN- 219
+ R D + F K P+VF+ I+I ALC+ GA + EM G++P+
Sbjct: 456 KAGRIDEA-ITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDT 514
Query: 220 -------------------------------LVTHTTILGGYVWRGDIENAKRVFGDILD 248
V H ++ G G E+A V + D
Sbjct: 515 VLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMAD 574
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
G+ DA TY ++ G KLG++ A +++D+ +
Sbjct: 575 AGFPADAFTYINVVRGLRKLGKVDKARQLVDDASET 610
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 219/442 (49%), Gaps = 10/442 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ ++ + LD A++IF + + N Y Y+++I A FD
Sbjct: 301 PDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQ-NRNVPCAY-AYNTMIMGYGSAGKFDEAY 358
Query: 99 SLLTELKQNPEIKC--GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
SLL K I N +T + G GR A++TF ++K + ++ + N L+
Sbjct: 359 SLLERQKARGCIPSVIAYNCILTCL---GKKGRLGEALRTFEEMKK-DAAPNLSTYNVLI 414
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L + + +++ + + PNV T NI+I LCK ++ A + + M
Sbjct: 415 DMLCKAGEVE-AAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKIC 473
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P+ VT +++ G +G +++A R++ +LD +P+A YT L+ + K GR D K
Sbjct: 474 SPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHK 533
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ EM G P+ ++ K ++G+ R L +++ R ++P +I L
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV 593
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLL 395
+ G + EL+ + + C+ D +T I CK GK+ +A +L +E + +G P+++
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY ++I G+ + L EA L+++ G+E NV Y+ LI GF K+G E I+EE+
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713
Query: 456 LDKGCFPNKTSFSLLIEGLYES 477
+ KG PN +++ L++ L ++
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKA 735
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/556 (23%), Positives = 232/556 (41%), Gaps = 112/556 (20%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
+D+A + FH K H + TY S+I L + D + +++QN + C
Sbjct: 284 VDMAWKFFHEI-KSHGLLPDDV-TYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA-YA 340
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I YG AG+ + A R + SV + N +L L + R F+ +
Sbjct: 341 YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK 400
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL---------------- 220
PN+ T N+LI LCK +VE A +V D M G+ PN+
Sbjct: 401 KD--AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458
Query: 221 -------------------VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
VT +++ G +G +++A R++ +LD +P+A YT L
Sbjct: 459 DEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSL 518
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ + K GR D K+ EM G P+ ++ K ++G+ R L +++ R +
Sbjct: 519 IKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGF 578
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+P +I L + G + EL+ + + C+ D +T I CK GK+ +A +
Sbjct: 579 IPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQ 638
Query: 382 LFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA--------------------------- 413
L +E + +G P+++TY ++I G+ + L EA
Sbjct: 639 LLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFG 698
Query: 414 --GRL------WDDMVEKGVEPNVFT---------------------------------- 431
GR+ +++++KG+ PNV+T
Sbjct: 699 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHI 758
Query: 432 -YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
Y++LI G C++ + +EM +G PN +++ +I GL ++GN E +
Sbjct: 759 TYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERF 818
Query: 491 TASGSV-ESDSWNFLL 505
A+G V +S S+N ++
Sbjct: 819 KANGGVPDSASYNAII 834
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 222/445 (49%), Gaps = 13/445 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
++ ++ R ++++ A+ F + + + + + Y S++ +A+ FD E +L E+
Sbjct: 98 VIGVLRRAKDVNQAISYFRWTER-KTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSI 156
Query: 107 ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P K L ++ I++ L R + +R KF + + + TL+ AL +
Sbjct: 157 AGFGPSTKTCIELILSCIKSNKL--REGFDLIQCMR--KFKFRPAFSAYTTLIGALSSVQ 212
Query: 164 RYDLVHLMFKNSRH-KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
D++ +F + ++V ++FT +I+ ++ ++ A+ +LDEM S + ++V
Sbjct: 213 ESDIMLTLFHQMQELGYEVSVHLFT--TVIRVFAREGRLDAALSLLDEMKSNCLHADIVL 270
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ + + G ++ A + F +I G +PD TYT ++ K RL +AV++ ++ME
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
N P Y MI + K EA +LL+ R +PS ++ L ++G++
Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG 390
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
+A ++ + +K+ P+ + + +I LCK G++ A K+ D E G P+++T N +I
Sbjct: 391 EALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMI 449
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+C++ +L EA +++ M K P+ T+ LI G K G + R+ E+MLD
Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKV 486
PN ++ LI+ ++ G + + K+
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKI 534
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 211/455 (46%), Gaps = 17/455 (3%)
Query: 47 LVSMIFRQQNLDLALQI---FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
L+ M+ + ++ A ++ AG F PN T + +I +L +A+ D S+
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLF-PNVM----TVNIMIDRLCKAKKLDEACSIFEG 467
Query: 104 LKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
+ +P+ E F ++I G GR + A + + ++ + + +L+ +
Sbjct: 468 MNHKICSPD----EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFF 523
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+ R + H +FK H+ P++ N + + K + + +E+ S G +P++
Sbjct: 524 KCGRKEDGHKIFKEMIHR-GCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDV 582
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
++++ ++ G V G +F + ++G V D Y +DG+ K G++ A ++++E
Sbjct: 583 MSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE 642
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M+ G +P VTYG +I+ K + EA L ++ + + +ID + G+
Sbjct: 643 MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNT 399
+++A + + L++K P+ + ++ L K +I EA F + P+ +TY+
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G+C + +A W +M ++G++PN TY +I G K GN E + E G
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
P+ S++ +IEGL S E K+ G
Sbjct: 823 GVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKG 857
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 203/435 (46%), Gaps = 6/435 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + ++ + + + LD A IF G H S + T+ S+I L + D
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFE--GMNHKICSPDEVTFCSLIDGLGKQGRVDDA 496
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
L ++ + +I ++ ++I+++ GR E K F + +R LN ++
Sbjct: 497 YRLYEQMLDSDKIP-NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMD 555
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ + +F+ + + +P+V + +ILI L K + M G V
Sbjct: 556 CVFKAGETGKGRALFEEIKSR-GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+ + T + G+ G + A ++ ++ +G P TY ++DG K+ RL +A +
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+E + NG+E N V Y +I+ F K + EA ++++++Q+ P+ ++D L +
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
++ +A ++ + P++ S +I+ LC+ K +A + E ++ G P+ +T
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y T+IAG+ ++ + EA L++ G P+ +YN +I+G A E +I EE
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854
Query: 457 DKGC-FPNKTSFSLL 470
KGC KT +LL
Sbjct: 855 MKGCNIHTKTCIALL 869
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 3/268 (1%)
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+++ G++ G+ P T L+ IK +L + ++ M P Y +I A
Sbjct: 148 EQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGA 207
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM-P 358
++S L M + Y S L VI + EG+++ A L + + NC+
Sbjct: 208 LSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM-KSNCLHA 266
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D + + I K GK+ A K F E + G +P +TY ++I +C+ L EA ++
Sbjct: 267 DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIF 326
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ M + P + YN +I G+ G E +LE +GC P+ +++ ++ L +
Sbjct: 327 EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLL 505
G GE + + ++N L+
Sbjct: 387 GRLGEALRTFEEMKKDAAPNLSTYNVLI 414
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 125/271 (46%), Gaps = 7/271 (2%)
Query: 75 SHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
+H Y+T+ K + +A+ +E + T+ +Q + G +VI R + A
Sbjct: 617 THAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYG-----SVIDGLAKIDRLDEA 671
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
F + ++ +V ++L++ + R D +L+ + K + PNV+T N L+
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPNVYTWNCLLD 730
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
AL K +++ A+ M ++ PN +T++ ++ G A + ++ +G P
Sbjct: 731 ALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKP 790
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TYT ++ G K G + +A + + + NG P+ +Y +IE +++ EA +
Sbjct: 791 NTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIF 850
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
++ + + C ++D L ++ +E A
Sbjct: 851 EETRMKGCNIHTKTCIALLDALQKDECLEQA 881
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 226/453 (49%), Gaps = 25/453 (5%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T++ GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C + EAR +L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L + + GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLXKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
++ L++ Y NE K A +E+D
Sbjct: 441 YNSLVQS-YLKKNEPXDAK----AALDSMIEND 468
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 216/459 (47%), Gaps = 45/459 (9%)
Query: 57 LDLALQIFH--YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+D+A + FH A P+ TY S++ L +A D + +++QN ++ C
Sbjct: 147 VDMAWKFFHEMKANGLVPDDV----TYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCA- 201
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ T+I YG AG+ + A R SV + N +L L + + D +F+
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL-------------- 220
+ +PN+ T NI+I LCK +VE A +V D M G+ PN+
Sbjct: 262 MKR--DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQ 319
Query: 221 ---------------------VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
T +++ G +G +++A R++ +LD +P+ YT
Sbjct: 320 KLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYT 379
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ + K R D K+ EM +G P+ + ++ K ++ + R L +++ R
Sbjct: 380 SLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKAR 439
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
++P + +I L + G + EL+ + + C+ D +T+I CK GK+ +A
Sbjct: 440 GFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKA 499
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L +E + G P+++TY +++ G+ + L EA L+++ G+E N Y+ LI G
Sbjct: 500 YQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDG 559
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
F K+G E ++EEM+ KG PN +++ L++GL ++
Sbjct: 560 FGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKA 598
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 200/398 (50%), Gaps = 6/398 (1%)
Query: 83 SIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK 142
++I +R DA SLL E+K N L+ I +G G+ ++A K F ++
Sbjct: 101 TLIRVFSREGRVDAALSLLDEMKSNT-FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKA 159
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
+ + +++ L + R D +F+ + VP + N +I +
Sbjct: 160 NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQN-RQVPCAYAYNTMIMGYGSAGKFD 218
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A +L+ + G +P++V + IL +G + A R+F + + R +P+ TY +++
Sbjct: 219 EAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE-MKRDAMPNLPTYNIII 277
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
K G + A KV D M++ G+ PN T +MI+ CK +K EA ++ + M +
Sbjct: 278 GMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCS 337
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P A C +ID L ++G+V+DA +++R+L + +P+ + +++I K + + K+
Sbjct: 338 PDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKM 397
Query: 383 FDEFER-GSIPSLLTYNTLIAGMCESAELTEAGR-LWDDMVEKGVEPNVFTYNMLIQGFC 440
+ E R G P L+ NT + + ++ E TE GR L++++ +G P+ +Y++LI
Sbjct: 398 YKEMMRSGCSPDLMLLNTYMDCVFKAGE-TEKGRALFEEIKARGFLPDTRSYSILIHSLV 456
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G A+E + M D+GC + +++ +I+G +SG
Sbjct: 457 KAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSG 494
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 163/319 (51%), Gaps = 8/319 (2%)
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+DL+ +M RH FK P LI AL + + + + + ++M +G N+ T
Sbjct: 46 FDLLQMM----RH-FKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLT 100
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
T++ + G ++ A + ++ + D Y V +D + K+G++ A K EM+ N
Sbjct: 101 TLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN 160
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ P++VTY M+ CK + EA + + M Q + VP + +I GK ++A
Sbjct: 161 GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEA 220
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGM 404
L +R K C+P + I+ L K+GK +A ++F+E +R ++P+L TYN +I +
Sbjct: 221 YSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGML 280
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C++ + A ++ D M E G+ PNV T N++I CK E I E M K C P+
Sbjct: 281 CKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDG 340
Query: 465 TSFSLLIEGLYESGNEGEV 483
+F LI+GL G +G V
Sbjct: 341 ATFCSLIDGL---GKQGRV 356
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 199/416 (47%), Gaps = 38/416 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG E A K +++ + +VR++N +++ L + ++ D +F+ +K P+
Sbjct: 283 AGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV-CSPDGA 341
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY---------------- 230
T LI L K+ V+ A R+ + M +PN+V +T+++ +
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401
Query: 231 ------------------VWR-GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
V++ G+ E + +F +I RG++PD +Y++L+ +K G
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFA 461
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+ ++ M+D G + Y +I+ FCK K +A LL++M + P+ V
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
+D L + ++++A L++ + I S++I K G++ EA + +E ++G
Sbjct: 522 VDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL 581
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P++ T+N L+ G+ ++ E+ EA + M + PN TY +LI G CK+ +
Sbjct: 582 TPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFV 641
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+EM +G PN +++ +I GL +SGN + + ASG + +S S+N ++
Sbjct: 642 FWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 215/472 (45%), Gaps = 13/472 (2%)
Query: 9 ITAPSCLLQSIGGARCSLSTITVTPPIK--PWPQRLYPKRLVSMIFRQQNLDLALQI--- 63
+ A +C+L +G + + + +K P ++ M+ + N++ A ++
Sbjct: 236 VVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDA 295
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRN 123
AG F PN T + +I +L +A+ D S+ + G F ++I
Sbjct: 296 MKEAGLF-PNVR----TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGAT-FCSLIDG 349
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
G GR + A + + R+ + +V +L+ + R + H M+K + P
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK-EMMRSGCSP 408
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
++ N + + K + E + +E+ + G +P+ +++ ++ V G ++
Sbjct: 409 DLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELY 468
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ D+G V D Y ++DG+ K G++ A ++++EM+ G P VTYG +++ K
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKI 528
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ EA L ++ + + +ID + G+V++A + + +++K P+
Sbjct: 529 DRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTW 588
Query: 364 STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ ++ L K +I EA F + P+ +TY LI G+C+ + +A W +M +
Sbjct: 589 NCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQK 648
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+G++PN TY +I G K GN + + E G P+ S++ +IEGL
Sbjct: 649 QGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL 700
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 213/461 (46%), Gaps = 13/461 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR-ARAFDA--VESLLTE 103
++ + + Q LD A IF G + S + T+ S+I L + R DA + + +
Sbjct: 311 MIDRLCKAQKLDEACSIFE--GMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLD 368
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
Q P + ++ ++IRN+ R E K + + + + LNT ++ + +
Sbjct: 369 ADQIPNVV----VYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG 424
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ +F+ + + +P+ + +ILI +L K + M G V + +
Sbjct: 425 ETEKGRALFEEIKAR-GFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAY 483
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T++ G+ G + A ++ ++ G P TY ++DG K+ RL +A + +E +
Sbjct: 484 NTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 543
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
NG+E N+V Y +I+ F K + EA ++++M+Q+ P+ ++D L + ++ +
Sbjct: 544 NGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINE 603
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
A ++ + C P+ +I+ LCK K +A + E ++ G P+ +TY +I+
Sbjct: 604 ALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMIS 663
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+ +S + +A L++ G P+ +YN +I+G A + ++ EE KGC
Sbjct: 664 GLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSI 723
Query: 463 NKTSFSLLIEGLY--ESGNEGEVGKVVSMATASGSVESDSW 501
+ + L++ L+ E + + V TA + SW
Sbjct: 724 HTKTCVALLDALHKAECLEQAAIVGAVLRETAKSQHAARSW 764
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 112/251 (44%), Gaps = 4/251 (1%)
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+++ G++ G+ P T L+ +K +L +A ++ M P Y +I A
Sbjct: 11 EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+ +S L + M + Y + L +I + EG+V+ A L + D
Sbjct: 71 LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ + I K GK+ A K F E + G +P +TY +++ +C++ L EA +++
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M + P + YN +I G+ G E +LE KGC P+ +++ ++ L G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCL---G 247
Query: 479 NEGEVGKVVSM 489
+G+ K + +
Sbjct: 248 KKGKTDKALRI 258
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 2/233 (0%)
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+++ EM G P T ++ + K +K EA +LL M K+ P+ + +I L
Sbjct: 12 QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-L 394
E G+ + L+ ++ + + +T+I +EG++ A L DE + + + +
Sbjct: 72 SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ YN I + ++ A + + +M G+ P+ TY ++ CK E + I E+
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLT 506
M P +++ +I G +G E ++ A G + S ++N +LT
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILT 244
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 203/432 (46%), Gaps = 40/432 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + ++ ++K V SV SLN L +LV KRY+ +F + P+ F I
Sbjct: 131 SAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVES-GLRPDQFMYGKAI 189
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+A K D++ AI ++ M G+ P + + ++GG +++A+++F ++LDR
Sbjct: 190 QAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVA 249
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY L+DGY K+G+L +A + + M+ VEP +T+ ++ C+ + EA+ +
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV 309
Query: 313 LDDMLQRKYVPS-----------------------------------SALCCKVIDLLCE 337
L++M +VP C +++ LC+
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCK 369
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
EG +E A E+ K+ L P +TI++ C+ G I +A ++ E G P+ +T
Sbjct: 370 EGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVT 429
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN+L+ CE + EA + MVEKGV PNV TYN LI G+ + +ILEEM
Sbjct: 430 YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME 489
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL--TRIVSDLD 513
KG PN S+ LI L + N E ++ G V + +N L+ + I L
Sbjct: 490 KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLK 549
Query: 514 SGAGALDELLVK 525
DE++ +
Sbjct: 550 DAFRFFDEMVAR 561
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 224/499 (44%), Gaps = 83/499 (16%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y+ +I L + + E L E+ + + + T+I Y G+ E A R
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEM-LDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRER 277
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF------------- 186
++ NV+ ++ + N+LLN L + + + + + + VP+ F
Sbjct: 278 MKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLE-EMEVYGFVPDRFTYTTLFDGHLKCG 336
Query: 187 ----------------------TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
TC+IL+ ALCK+ ++E A VL + G+ P V
Sbjct: 337 NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFN 396
Query: 225 TILGGYVWRGDI-----------------------------------ENAKRVFGDILDR 249
TI+ GY GDI E A++ ++++
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK 456
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G +P+ TY L+DGY + ++++EME G++PN ++YG +I CK EA
Sbjct: 457 GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA 516
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L DM+ R VP++ + +ID C GK++DA + ++ + +P + +I+
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576
Query: 370 LCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK+GK+ EA+ L E R + ++TYN+LI+G + + +A L++ M + G++P
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 429 VFTYNMLIQGFCKIGNAKEGI----RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ TY+ LI G C KEG+ +I +EML P++ ++ LI E G+ +
Sbjct: 637 LNTYHRLIAG-C----GKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKAC 691
Query: 485 KVVSMATASGSVESDSWNF 503
+ S A G ++ D +
Sbjct: 692 SLHSAMEAQG-IQPDKMTY 709
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 191/446 (42%), Gaps = 37/446 (8%)
Query: 84 IIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF 143
+++ L + + E +L + +N G F T++ Y G A T ++E
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGV-FFNTIVNGYCQVGDINKAYTTIEKMEAV 421
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
++ + + N+L+ + K + K K V+PNV T N LI + +
Sbjct: 422 GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK-GVLPNVETYNTLIDGYGRSCLFDR 480
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
++L+EM G+ PN++++ ++ +I A+ + GD++ RG VP+A Y +L+D
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID 540
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G G+L DA + DEM + P VTY ++I CK K EA NL ++ ++
Sbjct: 541 GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Query: 324 SSALCCKVIDLLCEEGKVEDACELW----------------------------------K 349
+I G V+ A EL+ +
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQ 660
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESA 408
+L+ N +PD I + +IH + G + +A L E +G P +TYN LI G +
Sbjct: 661 EMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEG 720
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ + L +DM +G+ P TY++LI G CK+ + EM + G P+ +
Sbjct: 721 RMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICD 780
Query: 469 LLIEGLYESGNEGEVGKVVSMATASG 494
LI GL E G + + S G
Sbjct: 781 NLITGLREEGRSHDADVICSEMNMKG 806
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 181/361 (50%), Gaps = 12/361 (3%)
Query: 152 LNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
NT++N Q NK Y + M + PN T N L+K C+ ++E A +
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKM-----EAVGLRPNHVTYNSLVKKFCEMKNMEEAEKC 449
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
+ +M G++PN+ T+ T++ GY + ++ ++ +G P+ +Y L++ K
Sbjct: 450 IKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCK 509
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ +A ++ +M GV PN Y ++I+ C K +A D+M+ R+ VP+
Sbjct: 510 DANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVT 569
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+I+ LC++GKV +A L + RK D +++I G + +A +L++ +
Sbjct: 570 YNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMK 629
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ I P+L TY+ LIAG C L +++ +M++ + P+ YN LI + + G+ +
Sbjct: 630 KSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQ 688
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+ + M +G P+K +++ LI G ++ G +V +V+ G + ++++++ L+
Sbjct: 689 KACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILI 748
Query: 506 T 506
Sbjct: 749 V 749
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 2/211 (0%)
Query: 288 PNEVTYGVMIEAFC-KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P + + M+ + C + K E+ L M + +PS A ++ L + ED +
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMC 405
L+ ++ PD + I K G + A +L +RG + P + YN +I G+C
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ + +A +L+D+M+++ V PN TYN LI G+CK+G +E I E M + P
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+F+ L+ GL + E +V+ G V
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFV 319
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
K + P + T + LI A C K+ + ++ EM M +VP+ V + ++ YV GD++
Sbjct: 630 KSGIKPTLNTYHRLI-AGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQ 688
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + + +G PD TY L+ G+ K GR+ ++++M+ G+ P TY ++I
Sbjct: 689 KACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILI 748
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA---CELWKRLLRK 354
CK K A +M + + PS ++C +I L EEG+ DA C +
Sbjct: 749 VGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKD 808
Query: 355 NCMPDNAISST 365
+C D S+
Sbjct: 809 DCRADEDASAV 819
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 173/341 (50%), Gaps = 3/341 (0%)
Query: 132 LAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+A F+R K V+ ++ S N L+ + ++ +F ++ P+VFT N+
Sbjct: 772 VAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA-GCAPDVFTYNL 830
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ A K + + ++M PN +TH I+ V ++ A +F D++
Sbjct: 831 LLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD 890
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ P TY L+DG +K GRL +A ++ +EM D G PN Y ++I F K A
Sbjct: 891 FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTAC 950
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L M++ P ++ LCE G+V+DA +++L + D+ + +I L
Sbjct: 951 ELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL 1010
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+ +I EA L+DE + RG P L TYN+LI + + + +AG+L++++ G+EPNV
Sbjct: 1011 GRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNV 1070
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
FTYN LI+G+ GN+ + + M+ GC PN +F+ L
Sbjct: 1071 FTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 204/430 (47%), Gaps = 36/430 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ +++ + R + V+SLL E+ ++ +K + IR G AGR + A + R
Sbjct: 231 TFSALMVATGKRRDTETVKSLLEEM-ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKR 289
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF---KNSRHKFKVV-------------- 182
+E V + L++AL + D +F K S HK V
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGD 349
Query: 183 -----------------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
P+V T IL+ ALCK +++ A +LD M G++PNL T+ T
Sbjct: 350 LGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNT 409
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G + +++A +F ++ G VP A TY + +D Y K GR A++ ++M+ G
Sbjct: 410 LISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG 469
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ PN V + + + + EA+ + + + P S ++ + G+V++A
Sbjct: 470 IAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAI 529
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGM 404
EL + C PD + +++I+ L K G++ EA K+F + + P+++TYNTLIAG+
Sbjct: 530 ELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGL 589
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
+ ++ A L+ M G PN T+N ++ CK +++L +M C P+
Sbjct: 590 GKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDV 649
Query: 465 TSFSLLIEGL 474
+F+ +I GL
Sbjct: 650 LTFNTIIHGL 659
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 159/339 (46%), Gaps = 5/339 (1%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N ++ N LI L + A+ + M G+ P+L T + ++ R D E K +
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G P+ TYT+ + + GR+ +A ++M MED+G P+ VTY V+I+A C
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K +A L M + P ++D + G + E W + PD
Sbjct: 313 GKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITF 372
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +++ LCK G I EA L D + G +P+L TYNTLI+G+ L +A L+++M
Sbjct: 373 TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET 432
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
GV P +TY + I + K G + + + E+M +G PN + + + L E G E
Sbjct: 433 LGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLRE 492
Query: 483 VGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
KV+ S + DS + ++ S AG +DE
Sbjct: 493 -AKVIFNRLKSNGLAPDSVTY---NMMMKCYSKAGQVDE 527
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 201/439 (45%), Gaps = 17/439 (3%)
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFIT 119
F + F N +Y+ +IH L ++ A + ++ E P +K L +
Sbjct: 180 FAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLE-GLKPSLKTFSALMVA 238
Query: 120 VIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+ R VK+ L +E ++ ++ + + L + R D + K
Sbjct: 239 TGKR-----RDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDD 293
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
P+V T +LI ALC ++ A+ + +M + P+ VT+ T+L + GD+
Sbjct: 294 -GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGR 352
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
K + ++ G+ PD T+T+L++ K G + +A ++D M GV PN TY +I
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + +A +L ++M VP++ ID + G+ + A E ++++ + P
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ + ++ L + G++ EAK +F+ + G P +TYN ++ ++ ++ EA L
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
DM E EP++ N LI K G E ++ + D P +++ LI GL
Sbjct: 533 SDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGL--- 589
Query: 478 GNEGEVGKVVSM-ATASGS 495
G EG+V + + + A+ +G+
Sbjct: 590 GKEGQVQRAMELFASMTGN 608
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 189/419 (45%), Gaps = 37/419 (8%)
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
L QN IK N ++ + + + G F ++ + + S N L++ L+Q+
Sbjct: 149 LMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSG 208
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
M++ + + P++ T + L+ A K+ D E +L+EM S+G+ PN+ T+
Sbjct: 209 LCREALEMYRRMVLE-GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTY 267
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T + G I+ A R+ + D G PD TYTVL+D G+L DA+++ +M+
Sbjct: 268 TICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKA 327
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
+ +P+ VTY M++ F G + +M Y P +++ LC+ G +++
Sbjct: 328 SSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDE 387
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE---------------- 387
A L + ++ +P+ +T+I L + ++ +A LF+ E
Sbjct: 388 AFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFID 447
Query: 388 --------------------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
RG P+++ N + + E L EA +++ + G+ P
Sbjct: 448 FYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAP 507
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ TYNM+++ + K G E I +L +M + C P+ + LI LY++G E K+
Sbjct: 508 DSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKM 566
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 1/295 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
VV TCN +++ L V + V + M + + +L T+ I G RG +
Sbjct: 120 VVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTP 179
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
FG + + G+ +A +Y L+ ++ G +A+++ M G++P+ T+ ++ A
Sbjct: 180 FAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVAT 239
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K + + ++LL++M P+ I +L G++++AC + KR+ C PD
Sbjct: 240 GKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDV 299
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I LC GK+ +A +LF + + S P +TY T++ + +L W +
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSE 359
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M G P+V T+ +L+ CK GN E +L+ M +G PN +++ LI GL
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/530 (22%), Positives = 217/530 (40%), Gaps = 94/530 (17%)
Query: 75 SHNYD--TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGR 129
SH D TY +++ K + V+ +E++ + P++ F ++ AG
Sbjct: 329 SHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVIT----FTILVNALCKAGN 384
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ A + K V ++ + NTL++ L++ R D +F N+ VVP +T
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF-NNMETLGVVPTAYTYI 443
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+ I K + A+ ++M G+ PN+V L G + AK +F +
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN-------------------- 289
G PD+ TY ++M Y K G++ +A++++ +M +N EP+
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 290 ---------------EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
VTY +I K + A L M P++ ++D
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL 394
LC+ +V+ A ++ ++ NCMPD +TIIH L E ++ +A LF + ++ P
Sbjct: 624 LCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDC 683
Query: 395 LTYNTLIAGMCESAELTEA----------------GRLWDDMV-----EKGVEPNVFTYN 433
+T TL+ G+ ++ + +A R W+D++ + G E + +
Sbjct: 684 VTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGD 743
Query: 434 MLIQG-FCKIGNA-----------KEG-------IRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ G CK G+ K+ IR +E+ G P S++ LIEG
Sbjct: 744 RLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKEL---GVKPTLESYNFLIEGF 800
Query: 475 YESGNEGEVGKVVS-MATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
N+ + + M A + + ++N LL D +G ++EL
Sbjct: 801 LGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLL-----DAHGKSGKINELF 845
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 242/526 (46%), Gaps = 58/526 (11%)
Query: 28 TITVTPPIKPWPQRL----------YPKRLV-SMIFRQQNLDLALQIFHYAGKFHPNFSH 76
TI+ +PW RL + LV +++ +N + ALQ F + + F +
Sbjct: 82 TISRMMANRPWTTRLQNSIRNLVPHFDHSLVYNVLHAARNSEHALQFFRWVERAGL-FKN 140
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+ DT+ II L RA + +L ++ + ++ E +F+ +I +YG AG + AVK
Sbjct: 141 DRDTHMKIIEILGRASKLNHARCILLDMPKKG-VEWDEYMFVVLIESYGKAGIVQEAVKI 199
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + V+RS++S + L +++ RY + +F N + P T NI++
Sbjct: 200 FNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVF-NKMLNDGIQPTRHTYNIMLWGFF 258
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+E A+R D+M + G+ P++VT+ T++ G+ +E A+++F ++ + P
Sbjct: 259 LSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVI 318
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+YT ++ GY+ + R+ D +++++EM+ ++PN TY ++ C K EA+++L +M
Sbjct: 319 SYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEM 378
Query: 317 LQRKYVPSS--------ALCCKVIDL----------------------------LCEEGK 340
+ R P + CK DL C+ +
Sbjct: 379 VARHLAPKDNSIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEE 438
Query: 341 VEDACELWKRLLRKNCM--PDNAIS------STIIHWLCKEGKIWEAKKLFDEFERGSIP 392
+ A + +L+ K + P + + + +I +LC G+ +A+ F + + +
Sbjct: 439 YDRAVKYLDKLIEKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKKGVQ 498
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
L +N LI G + A ++ M ++GV + Y ++I+ + + G + L
Sbjct: 499 DPLAFNNLICGHAKEGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTAL 558
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ ML+ G P+ + F ++E L+E G +V+ G E+
Sbjct: 559 DGMLEDGHVPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKEN 604
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/449 (19%), Positives = 189/449 (42%), Gaps = 59/449 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL------FITVIRNYGLAGRPELA 133
TY+++I+ R + + E L E+K G+N+ + T+I+ Y R +
Sbjct: 284 TYNTMINGFYRFKKMEEAEKLFVEMK-------GKNIAPTVISYTTMIKGYVAVDRVDDG 336
Query: 134 VKTFLRIEKFNVQRSVRSLNTLL----NALVQNKRYDLV------HLMFK---------- 173
++ ++ FN++ +V + +TLL +A + D++ HL K
Sbjct: 337 LRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLS 396
Query: 174 ---------------NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM------- 211
N+ + + +LI+ CK ++ + A++ LD++
Sbjct: 397 CQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYLDKLIEKEIIL 456
Query: 212 -PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
P + + ++ G A+ F ++ +G V D + L+ G+ K G
Sbjct: 457 RPQSTLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKKG-VQDPLAFNNLICGHAKEGY 515
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A ++ M GV + Y ++IE++ + + +A+ LD ML+ +VP ++
Sbjct: 516 PDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVFRS 575
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
V++ L E+G+V+ A + K ++ K + + I+ L G + EA + +
Sbjct: 576 VMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIELLMQSG 635
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ ++ L++ + E + A +L D +E+ + +Y+ ++ G
Sbjct: 636 FH--VNFDDLLSVLSEKGKTIAALKLLDFALERDFNLDFKSYDKVLDALLAAGKTLNAYS 693
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
IL +++ KG + +S LI+ L + GN
Sbjct: 694 ILCKIMQKGGVSDWSSSKDLIKSLNQEGN 722
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 8/262 (3%)
Query: 251 WVPDATTYTVLMDGYIK----LGR---LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
WV A + D ++K LGR L A ++ +M GVE +E + V+IE++ K
Sbjct: 131 WVERAGLFKNDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKA 190
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
EA + + M + S + ++ G+ A ++ ++L P
Sbjct: 191 GIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQPTRHTY 250
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ ++ ++ A + +D+ + RG P ++TYNT+I G ++ EA +L+ +M
Sbjct: 251 NIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKG 310
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
K + P V +Y +I+G+ + +G+R+LEEM PN ++S L+ GL ++ E
Sbjct: 311 KNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTE 370
Query: 483 VGKVVSMATASGSVESDSWNFL 504
++ A D+ FL
Sbjct: 371 AKDILIEMVARHLAPKDNSIFL 392
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 34/233 (14%)
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K V + N LI K+ + A + M G+ + + I+ Y+ +G+ +A
Sbjct: 495 KGVQDPLAFNNLICGHAKEGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADA 554
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
K +L+ G VPD + + +M+ + GR+ A +VM M + GV+ N G ++EA
Sbjct: 555 KTALDGMLEDGHVPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEA 614
Query: 300 FC---------------------------------KGKKSGEARNLLDDMLQRKYVPSSA 326
KGK A LLD L+R +
Sbjct: 615 LLMRGHVEEALGRIELLMQSGFHVNFDDLLSVLSEKGKTIA-ALKLLDFALERDFNLDFK 673
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
KV+D L GK +A + ++++K + D + S +I L +EG +A
Sbjct: 674 SYDKVLDALLAAGKTLNAYSILCKIMQKGGVSDWSSSKDLIKSLNQEGNTKQA 726
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 213/445 (47%), Gaps = 10/445 (2%)
Query: 57 LDLALQIF----HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
LD AL++F H A P ++ +++ + + A + V SL T + + K
Sbjct: 30 LDEALKLFDELLHCA---RPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKV 86
Query: 113 GEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
N + +I + GR E F I K + +V ++ LL L KR D
Sbjct: 87 APNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATD 146
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ +F P+V N +I ++ VE A + EM G+ PN+VT+TT++ G
Sbjct: 147 ILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
++ AK VF ++DRG PD TY L+ GY+ G+ + V++++EM +G+EP+
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+TY ++++ CK + EAR D M ++ P A+ ++ +G + +
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE 409
++ P+ I + + K+ I EA +F++ ++G P ++++ LI +C+
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ +A ++ M+ +GV PN+F ++ L+ G C +G ++ + E+LD+G + F+
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446
Query: 470 LIEGLYESGNEGEVGKVVSMATASG 494
L+ L G E +++ + G
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVG 471
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 209/469 (44%), Gaps = 41/469 (8%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +++ FR+ ++ A +F N TY ++I L +A+ D +
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLF--LEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAK 216
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+ ++ +K + +I Y G+ + V+ + ++ + LL+
Sbjct: 217 GVFQQMIDRG-VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDY 275
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L +N R L F +S + + P+V IL+ K + LD M G+ P
Sbjct: 276 LCKNGRCREARLFF-DSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSP 334
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N + Y + IE A +F + +G PD ++ L+D KLGR+ DAV
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
++M + GV PN + ++ LC
Sbjct: 395 NQMINEGVTPNIFVFSSLVYG-----------------------------------LCTV 419
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTY 397
GK E A EL+ +L + D +T++ LC EG++ EA++L D R G P++++Y
Sbjct: 420 GKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISY 479
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NTL+AG C + + EA +L D MV G++PN FTY +L++G+CK + + EML
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLM 539
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLL 505
KG P +++ ++ GL+++G E ++ ++M + + ++N +L
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIIL 588
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 202/413 (48%), Gaps = 10/413 (2%)
Query: 118 ITVIRNYGLAGRPELA-VKTFLRIEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
I I +G A + L+ + +FL + N V + R N + A + + +F
Sbjct: 303 IYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
R + + P+V + LI ALCK V+ A+ ++M + G+ PN+ ++++ G G
Sbjct: 363 RQQ-GLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E A+ +F ++LD+G DA + LM GR+ +A +++D M GV PN ++Y
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ C + EA LLD M+ P+ ++ C+ +V+DA L++ +L K
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAG 414
P A +TI+H L + G+ EA +L+ + + + TYN ++ G+C++ + EA
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAF 601
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+++ + K + + T+N++I K G ++ + + + G P+ ++ L+ E L
Sbjct: 602 KMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENL 661
Query: 475 YESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSDLD-SGAGA----LDE 521
E G+ GE + S SG+ S N L+ R++ D S AG LDE
Sbjct: 662 IEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDE 714
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 183/417 (43%), Gaps = 5/417 (1%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
F + Y ++H A A + S L + N + +F + Y
Sbjct: 293 FRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG-VSPNRRIFNIMFCAYAKKAM 351
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
E A+ F ++ + + V S L++AL + R D L F N V PN+F +
Sbjct: 352 IEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF-NQMINEGVTPNIFVFS 410
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L+ LC E A + E+ G+ + V T++ G + A+R+ ++
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRV 470
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P+ +Y L+ G+ GR+ +A K++D M NG++PNE TY +++ +CK ++ +A
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDA 530
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
+L +ML + P A ++ L + G+ +A EL+ ++ D + I++
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSL--LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK + EA K+F P L +T+N +I + + +A L+ + G+ P
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKD-PQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVP 649
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+V TY ++ + + G+ E + M G PN + L+ L G+ G
Sbjct: 650 DVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAG 706
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 141/363 (38%), Gaps = 45/363 (12%)
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
+ + + + N + S+++ L ++ E L E+ + I F T++
Sbjct: 391 VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV-LDQGICVDAVFFNTLMC 449
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHK 178
N GR A + + + V+ +V S NTL+ R D L+ +M N
Sbjct: 450 NLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG--- 506
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PN FT IL++ CK V+ A + EM G+ P + T+ TIL G G
Sbjct: 507 --LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGY--------------------------------- 265
A ++ ++++ D TY ++++G
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIG 624
Query: 266 --IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
+K GR DA+ + + G+ P+ VTY ++ E + GE L M + P
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAP 684
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+S + ++ L G + A +L KN + + +S +I + AK L
Sbjct: 685 NSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLP 744
Query: 384 DEF 386
+++
Sbjct: 745 EKY 747
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 239/521 (45%), Gaps = 20/521 (3%)
Query: 11 APSCLLQSIGG-------ARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQI 63
A S LLQ I G SL RLY + +++ + Q+LD + I
Sbjct: 58 AQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLY-EVIINAYVQSQSLDSS--I 114
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVI 121
+++ F + +++++ + + +F+ E K IK ++ F VI
Sbjct: 115 YYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK----IKVVLDVYSFGIVI 170
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
+ AG E + + + +F +V TL++ + + +F KF +
Sbjct: 171 KGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF-FEMGKFGL 229
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
V N +T +LI L K + + ++M G+ PNL T+ ++ G ++A +
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFK 289
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF ++ +RG + TY L+ G + + +A +VMD+M+ +G+ PN +TY +I+ FC
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFC 349
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+K G+A +L D+ R PS ++ C++G A ++ K + + P
Sbjct: 350 GVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKV 409
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I + + +A +L E G P + TY+ LI G C + EA RL+ M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSM 469
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
VEK EPN YN ++ G+CK G++ +R+ EM +K PN S+ +IE L +
Sbjct: 470 VEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529
Query: 481 GEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
E +V SG SDS L++R + DS + ++DE
Sbjct: 530 KEAEGLVEKMIDSGIGPSDSILNLISR--AKNDSHSRSMDE 568
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 208/414 (50%), Gaps = 4/414 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
+SH +I +++ F + SLL L ++ K L+ +I Y + + +
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTS-SSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSS 113
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + N LL +V + ++ F S K KVV +V++ I+IK
Sbjct: 114 IYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES--KIKVVLDVYSFGIVIK 171
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ ++E + +L E+ G PN+V +TT++ G +G+IE AK +F ++ G V
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TYTVL+ G K G ++ ++M+++GV PN TY ++ CK ++ +A +
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M +R + +I LC E K +A E+ ++ P+ +T+I C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
K+ +A L + + RG PSL+TYN L++G C+ + + AG++ +M E+G++P+ TY
Sbjct: 352 RKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTY 411
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+LI F + N ++ I++ M + G P+ ++S+LI G G E ++
Sbjct: 412 TILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 179/341 (52%), Gaps = 14/341 (4%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLM---FKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
R+ RSL L RY L LM F + H P T N LI+ALC++ D+
Sbjct: 94 RTFRSL------LTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRH 147
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A R L M G P+ T +++ GY ++ A+ +F + RG+ DA +Y L++
Sbjct: 148 AQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIE 207
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ + GR+ +A+++ E+E +P+ T+ +++ C ++ E +L M + + P
Sbjct: 208 GFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRP 263
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++ ++DL C E K E+A ++ + +P + +++ C+EG++ A ++F
Sbjct: 264 ATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVF 323
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ + +G P++ TYN ++ G C ++ +A L D M E GVEP+V TYN+LI+G C
Sbjct: 324 ESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G+ + R+L M G ++ ++++LI+ L ++G E
Sbjct: 384 GHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 203/449 (45%), Gaps = 17/449 (3%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R Q LD+A +F FS + +Y ++I D L EL+Q P++
Sbjct: 176 RTQQLDVAQDLFDKMPL--RGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ-PDMYT 232
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LV 168
L ++ A R E + ++++ + + R+ L++ + ++ + ++
Sbjct: 233 HAAL----VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKML 288
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+ MF N +VP TC ++ A C++ + GA+RV + M G PN+ T+ ++
Sbjct: 289 NEMFDNG-----LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQ 343
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G+ G + A + + + G PD TY +L+ G G + A +++ ME NG+
Sbjct: 344 GFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAA 403
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
++ TY V+I+A CK K EA +L D + R P+S VI+ LC+ GK + AC
Sbjct: 404 DQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFL 463
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCES 407
++++ C PD S I LCK E DE + + PS + Y +I + +
Sbjct: 464 EKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKE 523
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
A R+W MV G P+V TY ++ +C G E ++ EM G + ++
Sbjct: 524 RNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAY 583
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ LI+G G ++ T S+
Sbjct: 584 NTLIDGHTSIGKTDHAVTILKHMTGVASM 612
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 168/400 (42%), Gaps = 18/400 (4%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A F +E ++ + + NT++N L + ++D V F P+ +T
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFD-VACTFLEKMVSAGCAPDTYT 477
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ I+ LCK + +DEM + P+ V +T ++ + A R++G ++
Sbjct: 478 YSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMV 537
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G PD TYT + Y GRL +A V+ EM+ G+ + + Y +I+ K+
Sbjct: 538 SLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTD 597
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED----ACELWK-----------RLL 352
A +L M +P+ ++ L + ED +WK L+
Sbjct: 598 HAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELM 657
Query: 353 RKNCMPDNAISS-TIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAEL 410
+KN +P +A + I+ +E ++ E L + +P + Y +L+ C+
Sbjct: 658 KKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMY 717
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A L M+ G PN+ +Y L+ GF G A I + K ++ + ++
Sbjct: 718 PDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKII 777
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVS 510
I+GL G+ ++S+ SD +LT +S
Sbjct: 778 IDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELS 817
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 126/318 (39%), Gaps = 32/318 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI------RNYGLAGRPELA 133
TY I L + + S + E+ Q ++K + VI RNYGLA R
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQK-DVKPSTVNYTIVIDRLFKERNYGLATR---- 531
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ ++ V + T + A R + + K ++ + N LI
Sbjct: 532 --IWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK-KGGIIVDAMAYNTLID 588
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTH---------------TTILGGYVWRG-DIE 237
+ A+ +L M + +PN T + VW+ ++
Sbjct: 589 GHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELA 648
Query: 238 NAKRVFGDILDRGWVPD-ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ +F +++ + VP A Y +++G+ + RL + ++ M+++ + NE Y +
Sbjct: 649 DVFELF-ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ FCK + +A LL M+ ++P+ ++ EG+ + A E+++ L K
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEY 767
Query: 357 MPDNAISSTIIHWLCKEG 374
D + II L ++G
Sbjct: 768 NTDEIVWKIIIDGLIRQG 785
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 214/441 (48%), Gaps = 20/441 (4%)
Query: 48 VSMIF---RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA----RAFDAV-ES 99
SMI R+ +LD ALQ+F+ K N TY ++I+ L + AFD + E
Sbjct: 254 TSMILGHCRKHDLDSALQVFNQMAK--EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
+L + G + + + Y E A + F+ ++ + +V + L++ L
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCY------EDAWRLFVDMKNKGCEPNVYTYTALISGL 365
Query: 160 VQNKRYDL-VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
+ + + L + SR V PN T N LI L + ++ A VL+ M G P
Sbjct: 366 CVSGLLKVAIGLFHRMSRDG--VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N+VT+ ++ GY GD + A V ++L RG + TY ++ GY G T A++++
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
D M D G +P+E +Y +I FCK K A L ++M+ P+ +ID C++
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTY 397
K++ A L + + R C P+ + +IH L K+ A++L E G P+++TY
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+I G+C++ + A +++ M+E+G PN+ TY+ LI+ + G +E + E+
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Query: 458 KGCFPNKTSFSLLIEGLYESG 478
G P++ ++ +IE SG
Sbjct: 664 HGLIPDEITYVKMIEAYIMSG 684
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 6/318 (1%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M S G+ PNL+ + ++ G++ +A+ + + + PD TYT ++ G+ +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A++V ++M G EPN VTY +I C + EA +L+ +M+ +P++ C
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
I LC+ G EDA L+ + K C P+ + +I LC G + A LF R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+ +TYN LI + E+ + A + + M G PN+ TYN +I+G+C +G+ K+ +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF--LLTR 507
++ ML +G N +++ +I+G +SGN +++ + G + D W++ L+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICG 504
Query: 508 I--VSDLDSGAGALDELL 523
+S ++S G +E++
Sbjct: 505 FCKISKMESAFGLFNEMV 522
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 155/295 (52%), Gaps = 1/295 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN+ N +I ALCK +V A ++ ++ M P+ T+T+++ G+ + D+++A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+VF + G P+ TY+ L++G GR+ +A ++ EM +G+ P T I A
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C +A L DM + P+ +I LC G ++ A L+ R+ R P+
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I+ L + +I A + + R G P+++TYN +I G C + +A + ++
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M+++G N+ TYN +I+G+C GN +RIL+ M D GC P++ S++ LI G
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDE---MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
Y+ L+ I L RL VMD M GV+PN + Y +I A CK +A ++
Sbjct: 182 AYSALL---IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIM 238
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + + P + +I C + ++ A +++ ++ ++ C P+ ST+I+ LC
Sbjct: 239 KKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 298
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EA L E G +P+ T I +C+ +A RL+ DM KG EPNV+TY
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
LI G C G K I + M G FPN +++ LI L E+
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 33/376 (8%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVH 169
E + +I Y + + A +++ + +V++ N L++ L + + +L
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+M + + PNV T +I LCK A+ + ++M G +PNL+T+++++
Sbjct: 590 VMIEEG-----IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +E A+ +F ++ G +PD TY +++ YI G++ A + M G +P
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQR-----KYVPSSALCCKVIDLLCEEGKVEDA 344
TYGV+I KG K+ LL D QR VP+ + + D +DA
Sbjct: 705 LWTYGVLI----KGLKN---EYLLAD--QRLAALPDVVPNCSFGYQTTD--------QDA 747
Query: 345 CELWK-RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+ +L + + + ++ L G+ +EA +L +G P YN+L+
Sbjct: 748 VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 807
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ + A ++ M +G E ++ Y LI C++ KE E ML + P
Sbjct: 808 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867
Query: 463 NKTSFSLLIEGLYESG 478
+ ++LI+GL G
Sbjct: 868 DDVVQAVLIDGLLRDG 883
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 33/323 (10%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN T LI CK + ++ A +L+ M G PN+ T+ ++ G + + A+
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ +++ G P+ TYT ++DG K G + A+++ ++M + G PN +TY +I A
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K EA NL ++ + +P K+I+ GKVE A R+++ C P
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705
Query: 361 AISSTIIHWL--------------------CKEG---------KIWEAKKLFDEFERGSI 391
+I L C G + AK E + G
Sbjct: 706 WTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK--LAELDPGL- 762
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
S+ N L++ + + EA L M+ +G+ P+ YN L+ ++ N + +
Sbjct: 763 -SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGV 821
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
+ M +GC + + LI L
Sbjct: 822 FKHMSTQGCEVHLNGYKELICAL 844
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 137/349 (39%), Gaps = 25/349 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I L + + E+L EL+++ I E ++ +I Y ++G+ E A
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP-DEITYVKMIEAYIMSGKVEHAFNF 692
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ K Q ++ + L+ L Y L + + +P+V
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGL--KNEYLL-------ADQRLAALPDVVPNCSFGYQTT 743
Query: 197 KKDDVE---GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+D V + LD S+ + LV++ + G + A + G ++ +G P
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF------EANELLGSMISQGLCP 797
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y L+ +++ + A+ V M G E + Y +I A C+ + EAR
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++ML R + P + +ID L +G + E + + MP I + + K+
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 917
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +R T +T G C + L+ L+ +E
Sbjct: 918 RSWKHVAGCITKVKRA------TCSTSCTGQCFCSSLSRLYYLYPIKIE 960
>gi|224064366|ref|XP_002301440.1| predicted protein [Populus trichocarpa]
gi|222843166|gb|EEE80713.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 218/469 (46%), Gaps = 46/469 (9%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
WP+ L P +L ++ Q+N ALQIF A +P++ HN Y ++I L + +
Sbjct: 5 WPRLLTPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDRIAEM 64
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+ ++ +++ + +C +++F+T I+ Y AG+ AV F I KFN S NTLL
Sbjct: 65 KEVIDQMRDDS-CECKDSVFVTAIKTYASAGQISEAVSLFKNIPKFNCVNWTESFNTLLQ 123
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
LV+ + + H F + ++V + N+L+ LC+++ + A+++ EM G
Sbjct: 124 ILVKESKLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQGCY 183
Query: 218 PNLVTHTTILGGYVWRGDIENAKRV----FGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
PN ++ ++ G G + A + F I +G D Y L+D G++ +
Sbjct: 184 PNRDSYRILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDIVVYRTLLDALCDNGQVEE 243
Query: 274 AVKVMDEMEDNGVE------------------------------------PNEVTYGVM- 296
A++++ ++ G++ P+ +Y M
Sbjct: 244 AMEILGKILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLINEALIRGGVPSLASYTAMA 303
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR-LLRKN 355
++ +C+G K+G+A +LD+ +R Y PS + LC +G+ +A + +R ++ +N
Sbjct: 304 VDLYCEG-KTGQADKVLDETQERGYRPSLRTYEAKVTALCRQGRSGEAINVIEREMVERN 362
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEA 413
+P+ + + ++ LC G A + G + + TY L+ G+C EA
Sbjct: 363 SVPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAKQVGCVANQETYGILVDGLCRDGRFVEA 422
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
++ ++M+ K P TYN+LI+G +G E + LEEM+ + P
Sbjct: 423 SKVLEEMLIKSYWPPADTYNILIRGLSSMGRQYEAVIWLEEMVSQDKLP 471
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 199/410 (48%), Gaps = 14/410 (3%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYG 125
Y + +++ N +Y ++ +A F LL E+K N ++ + T+IR
Sbjct: 18 YRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNG-VRPNVVIHTTIIRGLC 76
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKV 181
AG+ A+ F RI + + +V + + L++AL ++ + Y LV M K
Sbjct: 77 TAGKVSQALLHFRRIGE-DCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKG-----C 130
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PNV T N LI K + ++ + +L EM G +++T+T IL + I+ A R
Sbjct: 131 SPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYR 190
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ + R V + +T L + R T+A+ ++++M G PN+V Y ++ C
Sbjct: 191 LLNALEKRNVVTYNSLFTALSTA--EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLC 248
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + EA +L M + ++ G+ D+ EL R+L + D
Sbjct: 249 KNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTK 308
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +IH CK G + EA +LF +RGSIPS +TYNTLI C++ + A +L M
Sbjct: 309 TMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
++ +PNV TYN +I+ FC+ +E I + M+D GCFP++ S++ L
Sbjct: 369 IQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 176/410 (42%), Gaps = 73/410 (17%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+L V +KR+ + + RH+ N + IL++ CK + + A+ +LDEM
Sbjct: 1 MLQIFVDSKRHRHGYEFY---RHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMK 57
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENA----KRVFGD----------------------- 245
S G+ PN+V HTTI+ G G + A +R+ D
Sbjct: 58 SNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTYSILVDALCKSGQPHE 117
Query: 246 -------ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
++ +G P+ TY L+DG+ KL RL + + ++ EM G + +TY ++++
Sbjct: 118 AYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILD 177
Query: 299 AFCK---------------------------------GKKSGEARNLLDDMLQRKYVPSS 325
FCK G ++ EA +LL+ M+Q P+
Sbjct: 178 IFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQ 237
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
V+ +LC+ ++++A ++ + + C D+ ++ G+ +++ +L
Sbjct: 238 VNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGR 297
Query: 386 -FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
G I T N +I C++ +L EA +L+ M ++G P+ TYN LI FCK
Sbjct: 298 MLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQ 357
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+++L +M+ PN +++ +I+ E E + M SG
Sbjct: 358 PDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSG 407
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 35/237 (14%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
NEV+YG++++ FCK G+ + A EL
Sbjct: 29 NEVSYGILMQGFCKA-----------------------------------GEFQQALELL 53
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESA 408
+ P+ I +TII LC GK+ +A F P++ TY+ L+ +C+S
Sbjct: 54 DEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTYSILVDALCKSG 113
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ EA L +MV+KG PNV TYN LI GF K+ E + +L+EM +GC + +++
Sbjct: 114 QPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYT 173
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVK 525
++++ ++ + E ++++ V +S L+ D + A +L E +++
Sbjct: 174 MILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQ 230
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 198/400 (49%), Gaps = 6/400 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++++ RA + L++ + P+ F +IR + GR A+ F
Sbjct: 132 TYNTMVNGYCRAGRIEDARRLISGMPFPPDTF----TFNPLIRALCVRGRVPDALAVFDD 187
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ SV + + LL+A + Y ++ R K P++ T N+LI A+C +
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK-GCEPDIVTYNVLINAMCNEG 246
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
DV+ A+ +L ++PS G P+ VT+T +L + + +F ++ PD T+
Sbjct: 247 DVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFN 306
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ + G + A+KV+D M ++G P+ VTY +++ C + +A LL +
Sbjct: 307 TIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSY 366
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P + V+ LC + E A EL ++ +C PD +T+I LC++G + A
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K+ ++ E G P ++TYN++I G+C + +A L ++ G +P++ T+N L++G
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
C + ++ +++ M+ C P+ T+F+ +I L + G
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG 526
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 160/343 (46%), Gaps = 36/343 (10%)
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR--- 241
V CNILIK LC V A RV ++G +VT+ T++ GY G IE+A+R
Sbjct: 98 VVPCNILIKRLCSGGRVADAERVF---ATLGASATVVTYNTMVNGYCRAGRIEDARRLIS 154
Query: 242 -----------------------------VFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
VF D+L RG P TY++L+D K
Sbjct: 155 GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYR 214
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A+ ++DEM G EP+ VTY V+I A C EA N+L D+ P + V+
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
LC + ++ EL+ + C PD +TI+ LC++G + A K+ D E G I
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P ++TY++++ G+C+ + +A L + G +P+ Y +++G C I + +
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ EM+ C P++ +F+ +I L + G KVV + +G
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 213/464 (45%), Gaps = 15/464 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDAVESLLTEL 104
L++ + + ++D AL I P+ D TY ++ L + + VE L E+
Sbjct: 238 LINAMCNEGDVDEALNILSDL----PSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEM 293
Query: 105 KQNPEIKCG--ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
N KC E F T++ + G + A+K + + + + +++L+ L
Sbjct: 294 ASN---KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV 350
Query: 163 KRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
R D V L+ + + K P+ ++K LC + E A ++ EM P+ V
Sbjct: 351 GRVDDAVELLSRLKSYGCK--PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEV 408
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T T++ +G ++ A +V + + G PD TY ++DG + DA++++ +
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G +P+ VT+ +++ C + +A L+ +M+ P + VI LC++G +
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLI 401
A E K + C+P+ + + ++ L K GK EA KL G+ P L+TYNT+I
Sbjct: 529 LQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT-PDLITYNTVI 587
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ + ++ ++ EA L MV G+ P+ TY L G C+ IR+L + D G
Sbjct: 588 SNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLS 647
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
P+ T ++ ++ G ++ + +SG + +S +L
Sbjct: 648 PDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIIL 691
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 201/439 (45%), Gaps = 13/439 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENL 116
AL +F H S + TY ++ +A + LL E++ P+I N+
Sbjct: 181 ALAVFD--DMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIV-TYNV 237
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
I + N G A+ + + + +L +L ++R+ V +F
Sbjct: 238 LINAMCNEGDVDE---ALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMA 294
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K P+ T N ++ +LC++ V+ AI+V+D M G +P++VT+++IL G G +
Sbjct: 295 SN-KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRV 353
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
++A + + G PD YT ++ G + + A ++M EM + P+EVT+ +
Sbjct: 354 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTV 413
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I + C+ A +++ M + P +ID LC E ++DA EL L C
Sbjct: 414 IASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGC 473
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD +T++ LC + +A++L + P T+NT+I +C+ L +A
Sbjct: 474 KPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
M E G PN TYN+++ K G +E +++L M + P+ +++ +I +
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNIT 591
Query: 476 ESGNEGEVGKVVSMATASG 494
++G E ++ + ++G
Sbjct: 592 KAGKMEEALDLLRVMVSNG 610
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 128/251 (50%), Gaps = 15/251 (5%)
Query: 266 IKLGRLTDAVKVMDEMEDNG-----VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
I+ + DA+ ++D + G + V ++I+ C G + +A + +
Sbjct: 69 IQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASA 128
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEA 379
V + +++ C G++EDA +RL+ P + + + +I LC G++ +A
Sbjct: 129 TVVTYN---TMVNGYCRAGRIEDA----RRLISGMPFPPDTFTFNPLIRALCVRGRVPDA 181
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+FD+ RG PS++TY+ L+ C+++ +A L D+M KG EP++ TYN+LI
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVE 497
C G+ E + IL ++ GC P+ +++ +++ L S EV ++ + MA+ + +
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD 301
Query: 498 SDSWNFLLTRI 508
++N ++T +
Sbjct: 302 EVTFNTIVTSL 312
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 136/308 (44%), Gaps = 12/308 (3%)
Query: 80 TYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
T++++I L + RA VE + +E NP+I ++ + + + A++
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQM-SENGCNPDIVTYNSIIDGLCNERCI----DDAME 463
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ + + + + NTLL L R++ + N H P+ T N +I +L
Sbjct: 464 LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS-DCPPDATTFNTVITSL 522
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+K + AI L M G +PN T+ ++ + G + A ++ + + PD
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN--GTPDL 580
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY ++ K G++ +A+ ++ M NG+ P+ +TY + C+ + A +L
Sbjct: 581 ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCR 640
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ P + ++ C+ + + A + + ++ CMPD + ++ L E
Sbjct: 641 LQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECL 700
Query: 376 IWEAKKLF 383
+ EAK+L
Sbjct: 701 LDEAKQLL 708
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 70 FHPNFSHNYDTYHSIIHKLA-RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
H + + T++++I L + A+E+L + +N I ++ + V+ AG
Sbjct: 504 MHSDCPPDATTFNTVITSLCQKGLLLQAIETLKI-MAENGCIP-NQSTYNIVVDALLKAG 561
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPN 184
+ + A+K + N + + NT+++ + + + DL+ +M N + P+
Sbjct: 562 KTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNG-----LSPD 614
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV--WRGDIENAKRV 242
T L +C++D + AIR+L + MG+ P+ + IL G+ WR DI A
Sbjct: 615 TITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDI--AIDC 672
Query: 243 FGDILDRGWVPDATTYTVLMDG 264
F ++ G +PD +TY +L++
Sbjct: 673 FAHMVSSGCMPDESTYIILLEA 694
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 227/471 (48%), Gaps = 33/471 (7%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLD----LALQIFHYAGKFHPNFS--------------- 75
+ P+ L P L+S IF + L + L +F +A K P+FS
Sbjct: 39 LAPYAAHLSPS-LISSIFASKALSSHPSVLLNVFKWAQKHVPSFSSPPNNSLSSLLTLLP 97
Query: 76 ---HNY---DTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
+Y D +I ++ R + + +L + PE + L T I Y +
Sbjct: 98 SLFRHYMFSDAKSLLISFISSDRQHELHKLILHPTRDLPE--PSKELLDTSIGAYVQMDQ 155
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ---NKRYDLVHLMFKNSRHKFKVVPNVF 186
P LA + F ++++ N + ++ + NTL+N+LV+ + L + K+S K VVPN
Sbjct: 156 PHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSI-KLGVVPNTN 214
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ NILI C + V+ A+ +++M G VP+ V++ TIL + R ++ A+ + D+
Sbjct: 215 SFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDM 274
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+G P+ TY +L+ GY +LG L +A KV++ M N + P TY +++ FC K
Sbjct: 275 KSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKI 334
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA + D+M + +P +ID + + L + + +K + + I
Sbjct: 335 DEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNII 394
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ W+CK+G + EA D+ E G P +TYNTLI C++ ++ +A R+ D+M KG+
Sbjct: 395 LKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGL 454
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ + +T N ++ C E +L +G ++ S+ +LI G ++
Sbjct: 455 KIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFK 505
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 197/408 (48%), Gaps = 16/408 (3%)
Query: 100 LLTELKQNPEIKCGENLFITV------IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
LL E + EI NL TV + + G+ + A + +EK NV V + N
Sbjct: 298 LLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYN 357
Query: 154 TLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
TL++ Q ++ Y L+ M K V N T NI++K +CKK ++ A LD
Sbjct: 358 TLIDGCSQWRDSSEVYSLIEEMDKKG-----VKCNAVTYNIILKWMCKKGNMTEATTTLD 412
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M G+ P+ VT+ T++G Y G + A R+ ++ +G D T ++
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEK 472
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+L +A ++ G +EV+YG++I + K +K A NL D+M +R+ +PS+
Sbjct: 473 KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYN 532
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
VI LC+ KV+ A + +L +PD + IIH C EG + +A + +E E
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN 592
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
P + T N L+ G+C L +A +L++ +V KG + +V TYN +I CK G +
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+L EM K P++ ++ ++I L ++G E + SG V
Sbjct: 653 YDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIV 700
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE---ARNLLDDMLQRK 320
Y+++ + A ++ ++M+ PN +T ++ + + S AR +L D ++
Sbjct: 149 AYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLG 208
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP++ +I C E KV+DA + ++ C+PD +TI+ L K + EA+
Sbjct: 209 VVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEAR 268
Query: 381 KLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L D +G P+ TYN L+ G C L EA ++ + M + P V+TYNML+ GF
Sbjct: 269 DLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGF 328
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
C G E RI +EM P+ +++ LI+G + + EV ++ G
Sbjct: 329 CNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKG 383
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 159/349 (45%), Gaps = 25/349 (7%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y AG+ A + + ++ +LNT+L+ L K+ D + + ++
Sbjct: 426 YNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSAS 485
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ ++ V + ILI K + + A+ + DEM ++P+ +T+ +++GG +
Sbjct: 486 KRGYILDEV-SYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKV 544
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A ++L+ G VPD TTY +++ G+ G + A + +EM +N +P+ T ++
Sbjct: 545 DQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNIL 604
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ C+ +A L + ++ + +I LC+EGK E+A +L + K
Sbjct: 605 LRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKL 664
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLF-----------DEFERGSIPSLLT--------- 396
PD II L G+I EA++ + G ++LT
Sbjct: 665 GPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDF 724
Query: 397 ----YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
Y+ I +C + +A L+ ++ ++GV N +TY L++G K
Sbjct: 725 KSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIK 773
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 4/204 (1%)
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC---EEGKVED 343
EP++ I A+ + + A + + M + Y P+ C +++ L +
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
A ++ K ++ +P+ + +I+ C E K+ +A ++ E G +P ++YNT++
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ + L EA L DM KG+ PN TYNML+ G+C++G KE +++E M P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 463 NKTSFSLLIEGLYESGNEGEVGKV 486
++++L+ G G E ++
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRI 340
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 49/269 (18%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+I L ++R D L E+ +N + E + +I + L G
Sbjct: 530 TYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP-DETTYNIIIHGFCLEG----------- 577
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
NV+++ + N +++N +FK P+V+TCNIL++ LC++
Sbjct: 578 ----NVEKAFQ----FHNEMIEN--------LFK---------PDVYTCNILLRGLCREG 612
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+E A+++ + + S G ++VT+ TI+ G ENA + ++ + PD TY
Sbjct: 613 MLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYK 672
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
V++ GR+ +A + +M ++G+ ++ K G+ +N+L +
Sbjct: 673 VIIAALTDAGRIKEAEEFTLKMVESGIVHDQ------------NLKLGKGQNVLTSEVSE 720
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ S I+ LC + K +DA L+
Sbjct: 721 HFDFKSIAYSDQINELCNQHKYKDAMHLF 749
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 221/430 (51%), Gaps = 16/430 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E
Sbjct: 23 KNSEHALQFFRWVERSNL-FQHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
++++ +I +YG G + +VK F ++++ V+R+++S + L + + RY + F N
Sbjct: 81 DMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGRYMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T NI+I VE A R ++M + + P+++T+ T++ GY
Sbjct: 140 KMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVK 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E A++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++ N +TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI----PSLL-----TYNTLIAGM 404
+ + +I CK G+ +A KL D+ I S L YN LI +
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMESSAYNPLIGYL 379
Query: 405 CESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
C + + +A L +++ GV+ P N LI+G + G+ +L+ ML +
Sbjct: 380 CNNGQTAKAEALVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSE 437
Query: 464 KTSFSLLIEG 473
K+++ L++
Sbjct: 438 KSAYDSLVQS 447
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 174/397 (43%), Gaps = 25/397 (6%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-----PNVFTCN-----ILIKALCKKDD 200
S+ L+ + Y+++H KNS H + N+F N +I+ L +
Sbjct: 2 SIRNLVPSFDHELVYNVLHGA-KNSEHALQFFRWVERSNLFQHNRETHLKIIEILGRASK 60
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A +L +MP G+ + ++ Y G ++ + ++F + + G +Y
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDA 120
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L + GR A + ++M G+EP T+ +MI F K A +DM R+
Sbjct: 121 LFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNRE 180
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P +I+ K+E+A + + + +N P +T+I ++ +A
Sbjct: 181 ITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM-LIQG 438
+L +E + G + +TY+TL+ G+C + +++EA + +MV+K + P + M LI G
Sbjct: 241 RLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISG 300
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK---------VVSM 489
CK GN +L+ M+ + +LIE ++G + K ++
Sbjct: 301 QCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILR 360
Query: 490 ATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKN 526
++ +ES ++N L+ + ++G A E LV+
Sbjct: 361 PQSTLHMESSAYNPLIGYLC---NNGQTAKAEALVRQ 394
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 212/436 (48%), Gaps = 10/436 (2%)
Query: 48 VSMIF---RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
SMI R+ +LD ALQ+F+ K N TY ++I+ L + + L+ E+
Sbjct: 254 TSMILGHCRKHDLDSALQVFNQMAK--EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ + +I + G E A + F+ ++ + +V + L++ L +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 370
Query: 165 YDL-VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ + L + SR V PN T N LI L + ++ A VL+ M G PN+VT+
Sbjct: 371 LKVAIGLFHRMSRDG--VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
++ GY GD + A V ++L RG + TY ++ GY G T A++++D M D
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 488
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G +P+E +Y +I FCK K A L ++M+ P+ +ID C++ K++
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIA 402
A L + + R C P+ + +IH L K+ A++L E G P+++TY +I
Sbjct: 549 ATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMID 608
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ + A +++ M+E+G PN+ TY+ LI+ + G +E + E+ G P
Sbjct: 609 GLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668
Query: 463 NKTSFSLLIEGLYESG 478
++ ++ +IE SG
Sbjct: 669 DEITYVKMIEAYIMSG 684
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 6/318 (1%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M S G+ PNL+ + ++ G++ +A+ + + + PD TYT ++ G+ +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A++V ++M G EPN VTY +I C + EA +L+ +M+ +P++ C
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
I LC+ G EDA L+ + K C P+ + +I LC G + A LF R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+ +TYN LI + E+ + A + + M G PN+ TYN +I+G+C +G+ K+ +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF--LLTR 507
++ ML +G N +++ +I+G +SGN +++ + G + D W++ L+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICG 504
Query: 508 I--VSDLDSGAGALDELL 523
+S ++S G +E++
Sbjct: 505 FCKISKMESAFGLFNEMV 522
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 155/295 (52%), Gaps = 1/295 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN+ N +I ALCK +V A ++ ++ M P+ T+T+++ G+ + D+++A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+VF + G P+ TY+ L++G GR+ +A ++ EM +G+ P T I A
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C +A L DM + P+ +I LC G ++ A L+ R+ R P+
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I+ L + +I A + + R G P+++TYN +I G C + +A + ++
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M+++G N+ TYN +I+G+C GN +RIL+ M D GC P++ S++ LI G
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDE---MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
Y+ L+ I L RL VMD M GV+PN + Y +I A CK +A ++
Sbjct: 182 AYSALL---IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIM 238
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + + P + +I C + ++ A +++ ++ ++ C P+ ST+I+ LC
Sbjct: 239 KKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 298
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EA L E G +P+ T I +C+ +A RL+ DM KG EPNV+TY
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
LI G C G K I + M G FPN +++ LI L E+
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 33/376 (8%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVH 169
E + +I Y + + A +++ + +V++ N L++ L + + +L
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+M + + PNV T +I LCK A+ + ++M G +PNL+T+++++
Sbjct: 590 VMIEEG-----IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +E A+ +F ++ G +PD TY +++ YI G++ A + M G +P
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQR-----KYVPSSALCCKVIDLLCEEGKVEDA 344
TYGV+I KG K+ LL D QR VP+ + + D +DA
Sbjct: 705 LWTYGVLI----KGLKN---EYLLAD--QRLAALPDVVPNCSFGYQTTD--------QDA 747
Query: 345 CELWK-RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+ +L + + + ++ L G+ +EA +L +G P YN+L+
Sbjct: 748 VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 807
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ + A ++ M +G E ++ Y LI C++ KE E ML + P
Sbjct: 808 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867
Query: 463 NKTSFSLLIEGLYESG 478
+ ++LI+GL G
Sbjct: 868 DDVVQAVLIDGLLRDG 883
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 33/323 (10%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN T LI CK + ++ A +L+ M G PN+ T+ ++ G + + A+
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ +++ G P+ TYT ++DG K G + A+++ ++M + G PN +TY +I A
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K EA NL ++ + +P K+I+ GKVE A R+++ C P
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705
Query: 361 AISSTIIHWL--------------------CKEG---------KIWEAKKLFDEFERGSI 391
+I L C G + AK E + G
Sbjct: 706 WTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK--LAELDPGL- 762
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
S+ N L++ + + EA L M+ +G+ P+ YN L+ ++ N + +
Sbjct: 763 -SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGV 821
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
+ M +GC + + LI L
Sbjct: 822 FKHMSTQGCEVHLNGYKELICAL 844
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 19/293 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I L + + E+L EL+++ I E ++ +I Y ++G+ E A
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP-DEITYVKMIEAYIMSGKVEHAFNF 692
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ K Q ++ + L+ L Y L + + +P+V
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGL--KNEYLL-------ADQRLAALPDVVPNCSFGYQTT 743
Query: 197 KKDDVE---GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+D V + LD S+ + LV++ + G + A + G ++ +G P
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF------EANELLGSMISQGLCP 797
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y L+ +++ + A+ V M G E + Y +I A C+ + EAR
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
++ML R + P + +ID L +G + E + + MP I + +
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 215/456 (47%), Gaps = 7/456 (1%)
Query: 56 NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
++D+A + FH K H + +Y S++ L +A E L +++ ++ C
Sbjct: 261 SVDMAWKFFHEL-KAH-GLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCA-Y 317
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+ T+I YG A R + A K R+ + SV S N++L L + ++ D +F
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ K PN+ T NI+I LC V A ++ DEM G+ PNL++ ++
Sbjct: 378 KKDAK--PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ 435
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A R+F +RG P++ TY L+DG K G++ DA ++ ++M D G + N + Y
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I F + + + +M++R P L +D + + G+VE +++ +
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFG 555
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD S +IH L K G+ E +F ++G YN ++ G+C+S ++ +A
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAY 615
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++M K V P V TY ++ G KI E + EE KG N +S LI+G
Sbjct: 616 EVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGF 675
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIV 509
+ G E ++ G + +WN L+ +V
Sbjct: 676 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALV 711
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 206/414 (49%), Gaps = 16/414 (3%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTELKQN----PEIKCGENLFITVIRNYGLAGRPELAV 134
D Y++++ L+ A A+E +L E+ P C L T++R+ R E A
Sbjct: 109 DAYNAVLPFLSHDLA--ALEKVLEEMSHLGYGLPNPACAA-LVATLVRSR----RLEDAF 161
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + + L+ AL + ++ + + L+ + ++V +FT L++
Sbjct: 162 RVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT--LVR 219
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
AL ++ +E A+ ++DE+ + P++V + + + G ++ A + F ++ G P
Sbjct: 220 ALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRP 279
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D +YT ++ K GRL +A ++ +ME P Y MI + ++ +A LL
Sbjct: 280 DDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLL 339
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + +R +PS ++ L ++ KV++A L+ +++K+ P+ + + II LC
Sbjct: 340 ERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFD-VMKKDAKPNISTYNIIIDMLCMA 398
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EA K+ DE E G P+LL+ N ++ +C++ +L EA R+++ E+G PN TY
Sbjct: 399 GRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTY 458
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
LI G K G + R+ E+MLD G N ++ LI + G + + K+
Sbjct: 459 CSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKI 512
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 206/440 (46%), Gaps = 16/440 (3%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P L +V + + L+ A +IF A + N N TY S+I L + D
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCN--PNSVTYCSLIDGLGKKGKIDDA 474
Query: 98 ESLLTEL-----KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
L ++ NP I + ++IRN+ + GR E K + + + + + L
Sbjct: 475 YRLFEKMLDAGHDANPII------YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT ++ + + + +F++ + F +P+V + +ILI L K + M
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMK-SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G + + ++ G G ++ A V ++ + P TY ++DG K+ RL
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A + +E + G+E N + Y +I+ F K + EA +L++M+++ P+ ++
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSI 391
D L + ++++A ++ + C P+ S +I+ LC+ K +A + E ++ G I
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLI 767
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++TY T+I+G+ + +T+A L++ G P+ ++N LI+G E ++
Sbjct: 768 PNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQV 827
Query: 452 LEEMLDKGCFPN-KTSFSLL 470
EE +GC N KT SLL
Sbjct: 828 FEETRLRGCRLNVKTCISLL 847
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 2/272 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ + Y++++ L ++ D +L E+K + + +++ R + A
Sbjct: 591 FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK-HVHPTVATYGSIVDGLAKIDRLDEA 649
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
F + ++ +V ++L++ + R D +L+ + K + PNV+T N L+
Sbjct: 650 YMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKK-GLTPNVYTWNSLMD 708
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
AL K ++++ A+ M M PN T++ ++ G A + ++ +G +P
Sbjct: 709 ALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIP 768
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TYT ++ G K+G +TDA + + + NG P+ ++ +IE + EA +
Sbjct: 769 NVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVF 828
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
++ R + C ++D L + +E A
Sbjct: 829 EETRLRGCRLNVKTCISLLDALNKTECLEQAA 860
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+L++M Y + C ++ L ++EDA + + P + + +I L
Sbjct: 128 VLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALA 187
Query: 372 KEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ + A +L + + G S+ + TL+ + ++ A L D++ +EP++
Sbjct: 188 EARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIV 247
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
YN+ I F K G+ + E+ G P+ S++ ++ L ++G GE ++
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307
Query: 491 TASGSV 496
A V
Sbjct: 308 EAERDV 313
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 91/241 (37%), Gaps = 39/241 (16%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
HP + TY SI+ LA+ D L E K I+ L+ ++I +G GR
Sbjct: 627 HPTVA----TYGSIVDGLAKIDRLDEAYMLFEEAKSK-GIELNVILYSSLIDGFGKVGRI 681
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR-------------- 176
+ A + K + +V + N+L++ALV+ + D + F++ +
Sbjct: 682 DEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSIL 741
Query: 177 --------------------HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
K ++PNV T +I L K ++ A + + + G
Sbjct: 742 INGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGG 801
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+P+ + ++ G A +VF + RG + T L+D K L A
Sbjct: 802 IPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAI 861
Query: 277 V 277
V
Sbjct: 862 V 862
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 211/439 (48%), Gaps = 16/439 (3%)
Query: 48 VSMIF---RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
SMI R+ +LD ALQ+F+ K N TY ++I+ L + + L+ E+
Sbjct: 254 TSMILGHCRKHDLDSALQVFNQMAK--EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL----V 160
+ + +I + G E A + F+ ++ + +V + L++ L +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGI 370
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
L H M ++ V PN T N LI L + ++ A VL+ M G PN+
Sbjct: 371 LKVAIGLFHRMSRDG-----VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
VT+ ++ GY GD + A V ++L RG + TY ++ GY G T A++++D
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M D G +P+E +Y +I FCK K A L ++M+ P+ +ID C++ K
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNT 399
++ A L + + R C P+ + +IH L K+ A++L E G P+++TY
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+I G+C++ + A +++ M+E+G PN+ TY+ LI+ + G +E + E+ G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 460 CFPNKTSFSLLIEGLYESG 478
P++ ++ +IE SG
Sbjct: 666 LIPDEITYVKMIEAYIMSG 684
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 164/318 (51%), Gaps = 6/318 (1%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M S G+ PNL+ + ++ G++ +A+ + + + PD TYT ++ G+ +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A++V ++M G EPN VTY +I C + EA +L+ +M+ +P++ C
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
I LC+ G EDA L+ + K C P+ + +I LC G + A LF R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+ +TYN LI + E+ + A + + M G PN+ TYN +I+G+C +G+ K+ +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF--LLTR 507
++ ML +G N +++ +I+G +SGN +++ + G + D W++ L+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICG 504
Query: 508 I--VSDLDSGAGALDELL 523
+S ++S G +E++
Sbjct: 505 FCKISKMESAFGLFNEMV 522
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 155/295 (52%), Gaps = 1/295 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN+ N +I ALCK +V A ++ ++ M P+ T+T+++ G+ + D+++A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+VF + G P+ TY+ L++G GR+ +A ++ EM +G+ P T I A
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C +A L DM + P+ +I LC G ++ A L+ R+ R P+
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I+ L + +I A + + R G P+++TYN +I G C + +A + ++
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M+++G N+ TYN +I+G+C GN +RIL+ M D GC P++ S++ LI G
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDE---MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
Y+ L+ I L RL VMD M GV+PN + Y +I A CK +A ++
Sbjct: 182 AYSALL---IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIM 238
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + + P + +I C + ++ A +++ ++ ++ C P+ ST+I+ LC
Sbjct: 239 KKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 298
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EA L E G +P+ T I +C+ +A RL+ DM KG EPNV+TY
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
LI G C G K I + M G FPN +++ LI L E+
Sbjct: 359 TALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 33/376 (8%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVH 169
E + +I Y + + A +++ + +V++ N L++ L + + +L
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+M + + PNV T +I LCK A+ + ++M G +PNL+T+++++
Sbjct: 590 VMIEEG-----IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +E A+ +F ++ G +PD TY +++ YI G++ A + M G +P
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQR-----KYVPSSALCCKVIDLLCEEGKVEDA 344
TYGV+I KG K+ LL D QR VP+ + + D +DA
Sbjct: 705 LWTYGVLI----KGLKN---EYLLAD--QRLAALPDVVPNCSFGYQTTD--------QDA 747
Query: 345 CELWK-RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+ +L + + + ++ L G+ +EA +L +G P YN+L+
Sbjct: 748 VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 807
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ + A ++ M +G E ++ Y LI C++ KE E ML + P
Sbjct: 808 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867
Query: 463 NKTSFSLLIEGLYESG 478
+ ++LI+GL G
Sbjct: 868 DDVVQAVLIDGLLRDG 883
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 33/323 (10%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN T LI CK + ++ A +L+ M G PN+ T+ ++ G + + A+
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ +++ G P+ TYT ++DG K G + A+++ ++M + G PN +TY +I A
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K EA NL ++ + +P K+I+ GKVE A R+++ C P
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705
Query: 361 AISSTIIHWL--------------------CKEG---------KIWEAKKLFDEFERGSI 391
+I L C G + AK E + G
Sbjct: 706 WTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAK--LAELDPGL- 762
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
S+ N L++ + + EA L M+ +G+ P+ YN L+ ++ N + +
Sbjct: 763 -SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGV 821
Query: 452 LEEMLDKGCFPNKTSFSLLIEGL 474
+ M +GC + + LI L
Sbjct: 822 FKHMSTQGCEVHLNGYKELICAL 844
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 19/293 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY S+I L + + E+L EL+++ I E ++ +I Y ++G+ E A
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP-DEITYVKMIEAYIMSGKVEHAFNF 692
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ K Q ++ + L+ L Y L + + +P+V
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGL--KNEYLL-------ADQRLAALPDVVPNCSFGYQTT 743
Query: 197 KKDDVE---GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+D V + LD S+ + LV++ + G + A + G ++ +G P
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF------EANELLGSMISQGLCP 797
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y L+ +++ + A+ V M G E + Y +I A C+ + EAR
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
++ML R + P + +ID L +G + E + + MP I + +
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 209/411 (50%), Gaps = 5/411 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T ++++ LAR R F V L L N +K ++ V++ A + +
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTL-VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQ 250
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
E S+ + N +N L ++KR ++ V + K S + + ++ T L+ LC+
Sbjct: 251 AEGNGCSLSIVTYNVFINGLCKSKRVWEAVEV--KRSLGEKGLKADLVTYCTLVLGLCRI 308
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ E + ++DEM +G VP+ + ++ G + G IE A + + G VP+ Y
Sbjct: 309 QEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVY 368
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++ K G+L +A + M + G+ PN+VTY ++I+ F + K A + M++
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ +I+ C+ GK++ A L+K ++ K P A +++I CK+G + +
Sbjct: 429 CGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK 488
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A KL+ E +G P+ +T+ LI G+C+ ++ EA +L+D+MVE + PN TYN+LI+
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
G C+ GN +L+EM+ KG P+ ++ LI GL +G E + ++
Sbjct: 549 GHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIN 599
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 155/298 (52%), Gaps = 1/298 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP+ + LI+ L K +EGA +L+++ +G+VPNL + +++ G +E A+
Sbjct: 327 VPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAEL 386
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F + +RG P+ TYT+L+DG+ + +L A ++M + G+ +Y MI C
Sbjct: 387 LFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQC 446
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K K A L +M+ + P+ A +I C++G V A +L+ + K P+
Sbjct: 447 KFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTV 506
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I LC+ K+ EA KLFDE E +P+ +TYN LI G C T A L D+M
Sbjct: 507 TFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEM 566
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++KG+ P+ +TY LI G C G E + ++ K ++ ++ L++G + G
Sbjct: 567 IKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEG 624
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 203/456 (44%), Gaps = 40/456 (8%)
Query: 53 RQQNLDLALQIFHYAGKF-HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
R+ LD+A F+Y K S +Y+S+I+ + E L E+ + +K
Sbjct: 412 RRAKLDVA---FYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEM-VDKGLK 467
Query: 112 CGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
+ ++I Y G A K + + + + + L+ L Q + +
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL 527
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F + + K++PN T N+LI+ C++ + A +LDEM G+ P+ T+ ++ G
Sbjct: 528 F-DEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV---------------- 275
G + AK D+ + D YT L+ G+ K GR+ +A+
Sbjct: 587 STGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLV 646
Query: 276 ------------------KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+++ EM G++P+ V Y ++I+ F K +A M+
Sbjct: 647 SYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
YVP+S +++ L + G V +A L+KR+L +P++ + L KEG +
Sbjct: 707 GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNME 766
Query: 378 EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +L + +GS + +TYN LI G C+ + EA +L D M+ G+ P+ TY+ I
Sbjct: 767 NALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIY 826
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+CK GN + + E ML +G P++ F+ LI
Sbjct: 827 EYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHA 862
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 209/440 (47%), Gaps = 28/440 (6%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF---DAVESLLTELKQNPEIKCGEN 115
LAL+ F++ G H NF H+ ++ +IH L + F ++ L NP + EN
Sbjct: 85 LALRFFNFLG-LHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPH-QIFEN 142
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
F + + Y KF+ S + L+ VQNKR + ++ N
Sbjct: 143 FFESY-KKY-----------------KFS---SSSGFDMLIQHYVQNKRV-MDGVLVVNL 180
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ ++P V T + L+ AL + + + D + + G+ P+ +T ++ D
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
AK + G TY V ++G K R+ +AV+V + + G++ + VTY
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ C+ ++ ++D+M++ YVPS A +I+ L + G +E A EL ++ +
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
+P+ + +++I+ LCK GK+ EA+ LF ERG P+ +TY LI G A+L A
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ M+E G+ V++YN +I CK G K + +EM+DKG P +++ LI G
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480
Query: 475 YESGNEGEVGKVVSMATASG 494
+ G + K+ T G
Sbjct: 481 CKDGLVPKAFKLYHEMTGKG 500
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 161/342 (47%), Gaps = 37/342 (10%)
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
N K VVPN+F N +I +LCK +E A + M G+ PN VT+T ++ G+ R
Sbjct: 354 NKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRR 413
Query: 234 -----------------------------------GDIENAKRVFGDILDRGWVPDATTY 258
G ++ A+ +F +++D+G P TY
Sbjct: 414 AKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATY 473
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
T L+ GY K G + A K+ EM G+ PN VT+ +I C+ K EA L D+M++
Sbjct: 474 TSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVE 533
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
K +P+ +I+ C EG A EL +++K PD +I LC G++ E
Sbjct: 534 LKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSE 593
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AK+ ++ + L Y L+ G C+ + EA +MV +G++ ++ +Y +LI
Sbjct: 594 AKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS 653
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G N + +L EM KG P+ +++LI+G +SGN
Sbjct: 654 GALN-QNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGN 694
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 5/371 (1%)
Query: 115 NLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
NLF+ ++I + G+ E A F + + + + + L++ + + D+ F
Sbjct: 364 NLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYF 423
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N + + V++ N +I CK ++ A + EM G+ P + T+T+++ GY
Sbjct: 424 -NKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCK 482
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + A +++ ++ +G P+ T+T L+ G ++ ++ +A K+ DEM + + PNEVT
Sbjct: 483 DGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVT 542
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V+IE C+ + A LLD+M+++ P + +I LC G+V +A E L
Sbjct: 543 YNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLH 602
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
K+ D + ++ CKEG+I EA E RG L++Y LI+G +
Sbjct: 603 HKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI 662
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
L +M KG++P+ Y +LI GF K GN K+ M+ +G PN +++ L+
Sbjct: 663 -LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALV 721
Query: 472 EGLYESGNEGE 482
GL+++G E
Sbjct: 722 NGLFKAGYVNE 732
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 202/445 (45%), Gaps = 12/445 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L+ + + +++ A ++ + GK N Y+S+I+ L + + E
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKL--GVVPNLFVYNSMINSLCKTGKLEEAE 385
Query: 99 ---SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
S++ E NP + + +I +G + ++A F ++ + + +V S N++
Sbjct: 386 LLFSVMAERGLNPN----DVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSM 441
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+N + + + L+FK K + P V T LI CK V A ++ EM G
Sbjct: 442 INCQCKFGKMKMAELLFKEMVDK-GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG 500
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ PN VT T ++ G + A ++F ++++ +P+ TY VL++G+ + G T A
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAF 560
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC-CKVIDL 334
+++DEM G+ P+ TY +I C + EA+ ++D L K+ LC ++
Sbjct: 561 ELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIND-LHHKHQRLDELCYTALLQG 619
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL 394
C+EG++++A + ++ + D + +I + + L + +G P
Sbjct: 620 FCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDN 679
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ Y LI G +S L +A W M+ +G PN TY L+ G K G E + +
Sbjct: 680 VIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKR 739
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGN 479
ML PN ++ ++ L + GN
Sbjct: 740 MLVGEAIPNHITYGCFLDHLTKEGN 764
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 11/338 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I L + + +L + + E + +++ + GR + A+
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQ-RLDELCYTALLQGFCKEGRIKEALVARQE 635
Query: 140 IEKFNVQRSVRSLNTLLN-ALVQNKR--YDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ +Q + S L++ AL QN R ++L+ M H + P+ ILI
Sbjct: 636 MVGRGLQMDLVSYAVLISGALNQNDRILFELLREM-----HGKGMQPDNVIYTILIDGFI 690
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +++ A M G VPN VT+T ++ G G + AK +F +L +P+
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI 750
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +D K G + +A+++ + M G N VTY ++I +C+ K EA LLD M
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ VP I C+ G V+ A ++W+ +L++ PD + + +IH C G++
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869
Query: 377 WEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEA 413
A +L D RG P+ TY++L+ + + A LT+
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VPN T L+ L K V A + M +PN +T+ L G++ENA +
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ +L +G + TY +L+ GY ++G+ +A K++D M G+ P+ +TY I +C
Sbjct: 771 LHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYC 829
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K A ++ + MLQR P + +I C G+++ A +L ++ + P +
Sbjct: 830 KRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQS 889
Query: 362 ISSTIIHWLCKEGKIWEAK 380
+++ L + ++ + +
Sbjct: 890 TYHSLMVQLAQRARLTQVQ 908
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 183/344 (53%), Gaps = 6/344 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKN--SRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
S+ N +L A+ + + YD+V ++K + ++ P+++TCNIL+ C+ A+
Sbjct: 84 SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 143
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
L +M +G+ P++VT ++++ G+ I++A V G + G D T+L+D
Sbjct: 144 SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 203
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K + A++V+ M+D G+ PN VTY +I CK + +A L +M +K P+
Sbjct: 204 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 263
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD- 384
+ID + GK+ ++K +++ + P+ S++I+ LC ++ EA K+ D
Sbjct: 264 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 323
Query: 385 EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+G P+++TY+TL G +S+ + + +L DDM ++GV N + N LI+G+ + G
Sbjct: 324 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+ + M G PN S+++++ GL+ + GEV K +S
Sbjct: 384 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN---GEVEKALS 424
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 194/406 (47%), Gaps = 6/406 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFL 138
++ ++ +A+ + +D V +L ++ I+ +L+ ++ + +P A+
Sbjct: 88 FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLG 147
Query: 139 RIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ K ++ + + ++L+N + N D V++ K + +V ILI LCK
Sbjct: 148 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYV--AGQMEKMGIKRDVVVDTILIDTLCK 205
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
V A+ VL M G+ PN+VT+++++ G G + +A+R ++ + P+ T
Sbjct: 206 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 265
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
++ L+D Y K G+L+ V M ++PN TY +I C + EA +LD M+
Sbjct: 266 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 325
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P+ + + + +V+D +L + ++ + +T+I + GKI
Sbjct: 326 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 385
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
A +F G IP++ +YN ++AG+ + E+ +A ++ M + + ++ TY ++I
Sbjct: 386 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 445
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G CK KE + ++ K P+ +++++I L +G E
Sbjct: 446 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTE 491
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+GR A + ++ + +V + + L++A + + V ++K + + PNVF
Sbjct: 241 SGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYK-MMIQMSIDPNVF 299
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T + LI LC + V+ AI++LD M S G PN+VT++T+ G+ +++ ++ D+
Sbjct: 300 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 359
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
RG + + L+ GY + G++ A+ V M NG+ PN +Y +++ +
Sbjct: 360 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A + + M + + +I +C+ V++A +L+ +L K PD + +
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 479
Query: 367 IHWLCKEGKIWEAKKL 382
I L + G EA L
Sbjct: 480 IAELNRAGMRTEADAL 495
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 7/216 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY S+I+ L D +L + C N+ + T+ + + R + +
Sbjct: 297 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISK---GCTPNVVTYSTLANGFFKSSRVDDGI 353
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
K + + V + S NTL+ Q + DL +F ++PN+ + NI++
Sbjct: 354 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN-GLIPNIRSYNIVLAG 412
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L +VE A+ + M +++T+T ++ G ++ A +F + + PD
Sbjct: 413 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 472
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
YT+++ + G T+A ++ V NE
Sbjct: 473 FKAYTIMIAELNRAGMRTEA-DALNRFYQKHVRQNE 507
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 178/340 (52%), Gaps = 3/340 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN+ N LI C ++E A++V + M PN+ T+T ++ G G +E A +
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++ G P+ TYT L+ G G L A +++ ME NG+ PN+ T+ V+I+A CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K EA+ L ++++ + + +ID LC+ GK++ A EL ++++ + +PD
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 363 SSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S++I LC++ K+ +A + D E+G S +TY +I + +++D M+
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G+ P++ TY + ++ +C+ G ++ ++ +M+D+G FPN +++ LI G G
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509
Query: 482 EVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSGAGALD 520
+ + G DS+ LL R+V S ++D
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLL-RLVVKKSSSDNSVD 548
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 5/294 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P + N L+ AL + + MP+ NL T+TT++ Y GDI AK+
Sbjct: 38 LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+L G PD+ YT + GY + G LT A +V M G TY ++
Sbjct: 94 HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
EA + M P + + ++ LCE G+ E+A L + + P+
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + +I C G++ A K+F+ + P++ TY LI G+C+S ++ A L+ M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
VE G+EPNV TY LIQG C G+ + R+L M G PN +FS+LI+ L
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 203/442 (45%), Gaps = 51/442 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
F N Y+++I A + + + N +C N+ + +I +G+ E
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN---RCSPNVRTYTELIHGLCKSGKVE 264
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFT 187
A+ F R+ + ++ +V + L+ + L+HLM N +VPN +T
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG-----LVPNDWT 319
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
++LI ALCK++ VE A L + G+ N V +T+++ G G I+ A + ++
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G+VPDA +Y+ L+DG + +L+ A ++++M + G++ + VTY ++I+ + S
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+ + D M+ P + CEEG++EDA + +++ + P+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN-------- 491
Query: 368 HWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L+TYNTLI G +++A ++ MV KG +P
Sbjct: 492 --------------------------LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP 525
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRI--LEEMLD-KGCFPNKTSFSLLIEGLYESGNEGEVG 484
N +Y +L++ K ++ + I + +M D + ++ + +LI GL + G+ E
Sbjct: 526 NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFS 585
Query: 485 KVVSMATASGSVESDSWNFLLT 506
++S+ G S++ N ++T
Sbjct: 586 SLLSVMKEHGYQPSNTINAMIT 607
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 215/457 (47%), Gaps = 27/457 (5%)
Query: 81 YHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITV-----------------IR 122
Y ++H LA ++ F LTEL K + E++F T+ ++
Sbjct: 128 YCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVK 187
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
Y G + TF +I + SV S N LLN L++ R D ++K + +
Sbjct: 188 AYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYK-EMARVGIH 246
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN +T NIL C+ DV+ L+ M G P++VT+ T++ Y +G +++A +
Sbjct: 247 PNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYL 306
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ + R +PD +YT LM+G K G++ +A ++ M G+ P+ V++ +I +CK
Sbjct: 307 YRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCK 366
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K E+R+LL +M+ P C +I+ +E ++ A L L R I
Sbjct: 367 EGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDI 426
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++ +C+EG+ + AK L +RG +P + YN LI +C+S + +A + +M
Sbjct: 427 YDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMG 486
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+ ++P+ TY LI C+ + E ++EEML G P+ L ++ E
Sbjct: 487 HRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRAL---MHVYCKER 543
Query: 482 EVGKVVSM----ATASGSVESDSWNFLLTRIVSDLDS 514
++GK ++ A +S+S+N L+ D D+
Sbjct: 544 DIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADA 580
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 166/357 (46%), Gaps = 38/357 (10%)
Query: 134 VKTFL-RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
V FL R+E+ + + + NTL++ + R D +++ ++ V+P++ + L+
Sbjct: 268 VNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYR-IMYRRNVLPDLVSYTALM 326
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK+ V A ++ M G+ P++V+ T++ GY G + ++ + +++ G
Sbjct: 327 NGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGIC 386
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD T VL++GY K R+ A+ ++ E+E GV + Y ++ + C+ + A++L
Sbjct: 387 PDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSL 446
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC--------------------------- 345
L + QR YVP + K+I+ LC+ + DA
Sbjct: 447 LQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCR 506
Query: 346 --------ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLT 396
L + +L+ +PD I ++H CKE I +A+ L F + I +
Sbjct: 507 TSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSES 566
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
YNTL+ CE A+ T L D M++ G PN+ T+ +I G K ++ +LE
Sbjct: 567 YNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKDKLLLE 623
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 1/187 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GRP A RI + V N L+ +L ++ L+ H+ + P+ T
Sbjct: 438 GRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHR-NIKPSAIT 496
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
LI LC+ A +++EM GM+P+ ++ Y DI A+ +
Sbjct: 497 YKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFA 556
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ D+ +Y L+ Y + T +++ D M G PN T+ MI K
Sbjct: 557 KEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVE 616
Query: 308 EARNLLD 314
+ + LL+
Sbjct: 617 KDKLLLE 623
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 218/434 (50%), Gaps = 21/434 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVM 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S N L +++ RY + F N
Sbjct: 86 MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I VE A R ++M S + P++VT+ T + GY +E A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTXINGYYRVKKMEEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ A+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR +L +M+ + P+ +++ ++I C G ++ A ++ K + R +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVLKAMXRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN I +C +
Sbjct: 325 EAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPS--AYNPXIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A L +++ GV+ P N LI+G + G+ +L+ ML + K++
Sbjct: 383 GQAXKAETLVRQLMKLGVQDPTAL--NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSA 440
Query: 467 FSLLIEGLYESGNE 480
++ L++ Y NE
Sbjct: 441 YNSLVQS-YLKKNE 453
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 216/431 (50%), Gaps = 36/431 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT---VIRNYGLAGRPELAVKT 136
T++S I L RA + +++ + E+ + +T +++ + G E A
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNILI 192
++K S+ S NT L L++N + ++ M +N + PN+++ NI++
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENG-----IEPNIYSYNIVM 370
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LC+ + A R++D M S G+ P+ VT+TT+L GY +G + AK + +++ +G
Sbjct: 371 DGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCH 430
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T L++ K GR ++A +++ +M + + + VT +++ C+ + +A +
Sbjct: 431 PNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEV 490
Query: 313 LDDMLQ----------------------RKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+ +M VP +I+ LC+ GK+E+A + +
Sbjct: 491 VSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIE 550
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAE 409
++ KN PD+ T + CK+GKI A ++ + ER G +L TYN+LI G+ +
Sbjct: 551 MMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQ 610
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF-PNKTSFS 468
+ E L D+M E+G+ P++ TYN +I C+ G K+ +L EMLDKG PN +SF
Sbjct: 611 IFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFK 670
Query: 469 LLIEGLYESGN 479
+LI+ +SG+
Sbjct: 671 ILIKAFCKSGD 681
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 218/468 (46%), Gaps = 73/468 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRNYGLAGRPELAVKTF 137
T++ +I L + A D L ++ E C N F ++R + AGR + A++
Sbjct: 153 TFNLLIQSLCESNALDHARELFDKM---SEKGCQPNKFTVGILVRGFCRAGRTKQALEFV 209
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
NV R V NTL+++ + D + + K ++P+V T N I ALC+
Sbjct: 210 DGKMGGNVNRVV--YNTLVSSFCKQDMNDEAEKLVERMTEK-GLLPDVVTFNSRISALCR 266
Query: 198 KDDVEGAIRVLDEMPSMGMV----PNLVTHTTILGGYVWRGDIENAKR------------ 241
V A R+ +M G + PN+VT +L G+ G +E A+
Sbjct: 267 AGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFV 326
Query: 242 -----------------------VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
V ++++ G P+ +Y ++MDG + + DA ++M
Sbjct: 327 SLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLM 386
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
D M NGV P+ VTY ++ +C K EA+ +L++M+++ P++ C +++ L +E
Sbjct: 387 DLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKE 446
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF------------ 386
G+ +A E+ +++ K+ D + +++ LC+ G++ +A ++ E
Sbjct: 447 GRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKEN 506
Query: 387 -----------ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
++P ++TY TLI G+C+ +L EA + + +M+ K + P+ TY+
Sbjct: 507 PVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTF 566
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ FCK G +R+L++M GC +++ LI GL G++G++
Sbjct: 567 VLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGL---GSKGQI 611
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 195/405 (48%), Gaps = 37/405 (9%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T++ Y G+ A + + + + NTLLN+L + R M +
Sbjct: 401 YTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMN 460
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM------------PSMGMV------- 217
K + V TCNI++ LC+ ++E A V+ EM P G+V
Sbjct: 461 EKSYQLDTV-TCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVS 519
Query: 218 ---PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
P+++T+TT++ G G +E AK+ F +++ + PD+ TY + + K G+++ A
Sbjct: 520 TNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSA 579
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
++V+ +ME NG TY +I + E L+D+M +R P +I+
Sbjct: 580 LRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINC 639
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTI-IHWLCKEGKIWEAKKLFDEF-----ER 388
LCE GK +DA L +L K + N S I I CK G A +LFD +
Sbjct: 640 LCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHK 699
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
++ SL+ +N L+AG +L++A L++ +E+ + F Y LI CK G +
Sbjct: 700 EALYSLM-FNELLAG----GKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDA 754
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNE---GEVGKVVSMA 490
+L++++DKG + +SF +I+GL + GN+ E+G+++ +A
Sbjct: 755 HGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELA 799
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P +T N+LI++LC+ + ++ A + D+M G PN T ++ G+ G + A
Sbjct: 147 VNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQAL 206
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ G + Y L+ + K +A K+++ M + G+ P+ VT+ I A
Sbjct: 207 EFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISAL 264
Query: 301 CKGKKSGEARNLLDDMLQRKYV----PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
C+ K EA + DM + P+ ++ C+EG +E+A L + + +
Sbjct: 265 CRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGN 324
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+T + L + GK+ E + + DE E G P++ +YN ++ G+C + + +A R
Sbjct: 325 FVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARR 384
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L D MV GV P+ TY L+ G+C G E IL EM+ KGC PN + + L+ L+
Sbjct: 385 LMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLW 444
Query: 476 ESGNEGEVGKVV 487
+ G + E +++
Sbjct: 445 KEGRKSEAEEML 456
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 173/359 (48%), Gaps = 9/359 (2%)
Query: 143 FNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILI-KALCKKDD 200
F + S S ++LN L Q+ + D FK+ R F P L+ ++ +++
Sbjct: 72 FQLTTSHHSHISILNILSQSPHHLDFAFSHFKSLRTHFPSTPLPLQLYHLLLRSSLQQNR 131
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ +M G+ P T ++ +++A+ +F + ++G P+ T +
Sbjct: 132 PHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGI 191
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ + GR A++ +D V N V Y ++ +FCK + EA L++ M ++
Sbjct: 192 LVRGFCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTIIHWLCKEGKI 376
+P I LC GKV +A +++ + + P+ + ++ C+EG +
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMM 309
Query: 377 WEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA+ L + ++G + SL +YNT + G+ + +L E + D+MVE G+EPN+++YN++
Sbjct: 310 EEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIV 369
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ G C+ + R+++ M+ G +P+ +++ L+ G G E +++ G
Sbjct: 370 MDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKG 428
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 192/407 (47%), Gaps = 34/407 (8%)
Query: 80 TYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKT 136
TY +++H ++ + F+A +++L E+ + C N + T++ + GR A +
Sbjct: 400 TYTTLLHGYCSKGKVFEA-KAILNEMIRKG---CHPNTYTCNTLLNSLWKEGRKSEAEEM 455
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFK----------------NSR 176
++ + + Q + N ++N L +N K ++V M+ NS
Sbjct: 456 LQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSI 515
Query: 177 HKFKV-VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
H VP+V T LI LCK +E A + EM + + P+ VT+ T + + +G
Sbjct: 516 HNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGK 575
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
I +A RV D+ G TY L+ G G++ + +MDEM + G+ P+ TY
Sbjct: 576 ISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNN 635
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV-IDLLCEEGKVEDACELWKRLLRK 354
MI C+G K+ +A +LL +ML + V + K+ I C+ G + ACEL+ L
Sbjct: 636 MINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV 695
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEA 413
C A+ S + + L GK+ +AK+LF+ ER + Y LI +C+ L +A
Sbjct: 696 -CGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDA 754
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN---AKEGIRILEEMLD 457
L +++KG + ++ +I G K GN A E RI+E L+
Sbjct: 755 HGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALE 801
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 190/409 (46%), Gaps = 13/409 (3%)
Query: 93 AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
AF +SL T P L+ ++R+ RP + + + V +
Sbjct: 98 AFSHFKSLRTHFPSTPLPL---QLYHLLLRSSLQQNRPHYVTSLYTDMIQTGVNPETYTF 154
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N L+ +L ++ D +F K PN FT IL++ C+ + A+ +D
Sbjct: 155 NLLIQSLCESNALDHARELFDKMSEK-GCQPNKFTVGILVRGFCRAGRTKQALEFVD--G 211
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
MG N V + T++ + + + A+++ + ++G +PD T+ + + G++
Sbjct: 212 KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVF 271
Query: 273 DAVKVMDEMEDNG----VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR-KYVPSSAL 327
+A ++ +M+ +G +PN VT+ +M++ FC+ EAR+L++ M + +V +
Sbjct: 272 EASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESY 331
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EF 386
++ LL GK+ + + ++ P+ + ++ LC+ + +A++L D
Sbjct: 332 NTWLLGLL-RNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMV 390
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
G P +TY TL+ G C ++ EA + ++M+ KG PN +T N L+ K G
Sbjct: 391 SNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKS 450
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
E +L++M +K + + ++++ GL +G + +VVS G+
Sbjct: 451 EAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGT 499
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L DM+Q P + +I LCE ++ A EL+ ++ K C P+ ++
Sbjct: 137 SLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGF 196
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
C+ G+ +A + D G++ ++ YNTL++ C+ EA +L + M EKG+ P+V
Sbjct: 197 CRAGRTKQALEFVDGKMGGNVNRVV-YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCF----PNKTSFSLLIEGLYESGNEGEVGKV 486
T+N I C+ G E RI +M G PN +F+L+++G + G E +
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315
Query: 487 VSMATASGS-VESDSWNFLLTRIVSD--LDSGAGALDELL 523
V G+ V +S+N L ++ + L G LDE++
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMV 355
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 37/400 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I + R + A + R+ + + N ++ +L + DL L N
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA-LKVLNQLLSD 222
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
P V T ILI+A + V+ A++++DEM S G+ P++ T+ TI+ G G ++ A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ +G PD +Y +L+ + G+ + K+M +M +PN VTY ++I
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K EA NLL M ++ P + +I C EG+++ A E + ++ C+PD
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF--------------------------------- 386
+T++ LCK GK +A ++F +
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 387 ---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
G P +TYN++I+ +C + EA L DM P+V TYN+++ GFCK
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
++ I +LE M+ GC PN+T++++LIEG+ +G E
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 1/299 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+VF N LI CK + ++ A RVLD M S P+ VT+ ++G RG ++ A +V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L P TYT+L++ + G + +A+K+MDEM G++P+ TY +I CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A ++ ++ + P ++ L +GK E+ +L ++ + C P+
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC++GKI EA L E+G P +Y+ LIA C L A + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
G P++ YN ++ CK G A + + I ++ + GC PN +S++ + L+ SG++
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 144/284 (50%), Gaps = 2/284 (0%)
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ + ++ +L+ M G P+++ T ++ G+ +I A RV +IL++ PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L++G+ K+ R+ DA +V+D M P+ VTY +MI + C K A +L+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+L P+ +I+ EG V++A +L +L + PD +TII +CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A ++ E +G P +++YN L+ + + E +L M + +PNV TY++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI C+ G +E + +L+ M +KG P+ S+ LI G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 180/387 (46%), Gaps = 7/387 (1%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRP 130
+FS + TY+ +I L D +L +L + C + + +I L G
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD---NCQPTVITYTILIEATMLEGGV 244
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A+K + ++ + + NT++ + + D M +N K P+V + NI
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK-GCEPDVISYNI 303
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L++AL + E +++ +M S PN+VT++ ++ G IE A + + ++G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PDA +Y L+ + + GRL A++ ++ M +G P+ V Y ++ CK K+ +A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ + + P+S+ + L G A + ++ PD +++I L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+EG + EA +L + PS++TYN ++ G C++ + +A + + MV G PN
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEML 456
TY +LI+G G E + + +++
Sbjct: 544 TTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 10/313 (3%)
Query: 80 TYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
TY++II + + RAF+ V +L ELK N+ + + N G+ E K
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNL--ELKGCEPDVISYNILLRALLN---QGKWEEGEK 319
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ +V + + L+ L ++ + + + K + K + P+ ++ + LI A
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAF 378
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C++ ++ AI L+ M S G +P++V + T+L G + A +FG + + G P++
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
++Y + G A+ ++ EM NG++P+E+TY MI C+ EA LL D
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M ++ PS V+ C+ ++EDA + + ++ C P+ + +I + G
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558
Query: 376 IWEAKKLFDEFER 388
EA +L ++ R
Sbjct: 559 RAEAMELANDLVR 571
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
K+ C G ++ L + ++RK PD + + +I I +A ++ + E+
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + YN LI G C+ + +A R+ D M K P+ TYN++I C G +
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++L ++L C P ++++LIE G E K++ + G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 215/465 (46%), Gaps = 46/465 (9%)
Query: 58 DLALQIFHYAGK-------FHPNFSHNY----DTYHSIIHKLARARAFDAVESLLTELKQ 106
++ + F AGK FH SH TY S+I L +A D L +L+Q
Sbjct: 269 NVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQ 328
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-- 164
N ++ C + T+I YG AG+ + A R + SV + N +L L + +R
Sbjct: 329 NRKVPCA-YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVE 387
Query: 165 -------------------YDLV------------HLMFKNSRHKFKVVPNVFTCNILIK 193
Y+++ L ++ + + PNV T NI+I
Sbjct: 388 EALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID 447
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK +E A + + M PN VT ++++ G G +++A ++ +LD G VP
Sbjct: 448 RLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 507
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
A YT L+ + K GR D K+ EM G P+ ++ K ++ + R L
Sbjct: 508 GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALF 567
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++ ++P + +I L + G + EL+ + + C+ D + +I CK
Sbjct: 568 REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 627
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
GK+ +A +L +E + +G P+++TY ++I G+ + L EA L+++ G++ NV Y
Sbjct: 628 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVY 687
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ LI GF K+G E I+EE++ KG PN +++ L++ L ++
Sbjct: 688 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 732
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 233/467 (49%), Gaps = 7/467 (1%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 89
T+ + ++ P+ ++ ++ R ++ + A+ F +A K H + Y+S++ +A
Sbjct: 78 TLENSLSALGEKPLPELVIGVLKRLKDANTAVNYFQWAEK-QTEKVHCPEAYNSLLMVMA 136
Query: 90 RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
R FD +E +L E+ + N+ I ++ N + + A + KF + +
Sbjct: 137 RNTEFDHLERILEEMSLSG-FGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAF 195
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ L+ AL + + D + ++F + ++V ++FT LI+ ++ V+ A+ +L
Sbjct: 196 SAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFT--TLIRVFAREGRVDAALSLL 253
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DEM S + ++V + + + G ++ + + F ++ G +PD TYT ++ K
Sbjct: 254 DEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKA 313
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
RL +AV++ +++E N P Y MI + K EA LL+ + +PS
Sbjct: 314 NRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAY 373
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
++ L ++ +VE+A +++ + +++ +P+ + +I LC+EGK+ A ++ D+ ER
Sbjct: 374 NCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER 432
Query: 389 -GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P++LT N +I +C++ +L EA +++ M +K PN T++ LI G K G +
Sbjct: 433 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDD 492
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ E+MLD G P ++ LI ++ G + + K+ +G
Sbjct: 493 AYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 539
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 226/485 (46%), Gaps = 29/485 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + +++ ++ AL+IF + + N TY+ +I L R +A + ++++
Sbjct: 376 ILTCLGKKRRVEEALRIFE---EMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER 432
Query: 107 NPEIKCGENLFITV------IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
LF V I A + E A F ++ + + ++L++ L
Sbjct: 433 -------AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485
Query: 161 QNKRYDLVHLMFK---NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ R D + +++ + H VP LI++ K E ++ EM G
Sbjct: 486 KCGRVDDAYSLYEKMLDCGH----VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 541
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+L T + G+ E + +F +I G++PDA +Y++L+ G +K G + ++
Sbjct: 542 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 601
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
M++ G + Y +I+ FCK K +A LL++M + + P+ VID L +
Sbjct: 602 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 661
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
++++A L++ + + S++I K G+I EA + +E ++G P++ T
Sbjct: 662 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 721
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+N L+ + ++ E+ EA + M + PN TY++LI G C++ + +EM
Sbjct: 722 WNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 781
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSDLDSG 515
G PN +++ +I GL ++GN E + S A+G + +S S+N ++ L S
Sbjct: 782 KLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN----AMIEGLSSA 837
Query: 516 AGALD 520
A+D
Sbjct: 838 NKAMD 842
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 206/442 (46%), Gaps = 7/442 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P L ++ + + Q L+ A IF G + N T+ S+I L + D
Sbjct: 436 FPNVLTVNIMIDRLCKAQKLEEACSIFE--GMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 493
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
SL ++ + G ++ ++IR++ GR E K + + + +NT ++
Sbjct: 494 YSLYEKMLDCGHVP-GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 552
Query: 158 ALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ + + +F+ + H F +P+ + +ILI L K + M G
Sbjct: 553 CVFKAGETEKGRALFREINAHGF--IPDARSYSILIHGLVKAGLANETYELFYAMKEQGC 610
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
V + + ++ G+ G + A ++ ++ +G P TY ++DG K+ RL +A
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 670
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ +E + NG++ N V Y +I+ F K + EA ++++++Q+ P+ ++D L
Sbjct: 671 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 730
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLL 395
+ ++ +A ++ + C P+ S +I+ LC+ K +A + E ++ G P+ +
Sbjct: 731 KAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTI 790
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY T+I+G+ ++ + EA L+ G P+ +YN +I+G A + + EE
Sbjct: 791 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEET 850
Query: 456 LDKGCFPNKTSFSLLIEGLYES 477
KGC + + +L++ L+++
Sbjct: 851 RLKGCNIHTKTCVVLLDALHKA 872
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 212/474 (44%), Gaps = 17/474 (3%)
Query: 9 ITAPSCLLQSIGGARCSLSTITVTPPIK--PWPQRLYPKRLVSMIFRQQNLDLALQI--- 63
+ A +C+L +G R + + +K P L+ M+ R+ L+ AL+I
Sbjct: 370 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDD 429
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVI 121
AG F PN T + +I +L +A+ + S+ + C N F ++I
Sbjct: 430 MERAGLF-PNVL----TVNIMIDRLCKAQKLEEACSIFEGMDDKV---CTPNAVTFSSLI 481
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
G GR + A + ++ +L+ + + R + H ++K H
Sbjct: 482 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHT-GC 540
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P++ N + + K + E + E+ + G +P+ +++ ++ G V G
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 600
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F + ++G V D Y ++DG+ K G++ A ++++EM+ G P VTYG +I+
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + EA L ++ + + +ID + G++++A + + L++K P+
Sbjct: 661 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 720
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ ++ L K +I EA F + P+ +TY+ LI G+C + +A W +M
Sbjct: 721 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 780
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G++PN TY +I G K GN E + G P+ S++ +IEGL
Sbjct: 781 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 834
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+I LA+ D L E K N IK ++ ++I +G GR + A
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNG-IKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +V + N LL+ALV+ + + + F+ S K PN T +ILI LC+
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ-SMKDLKCPPNQITYSILINGLCRVR 768
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A EM +G+ PN +T+TT++ G G+I A +F G +PD+ +Y
Sbjct: 769 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 828
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++G + DA + +E G + T V+++A K +
Sbjct: 829 AMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAE 873
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++++EM +G P+ ++ K +K EA +++ M + K+ P+ + +I L
Sbjct: 146 RILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGAL 205
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-L 394
E + + L+ ++ + + +T+I +EG++ A L DE + S+ + +
Sbjct: 206 SEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADI 265
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ YN I ++ ++ + + + +M G+ P+ TY +I CK E + + E+
Sbjct: 266 VLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQ 325
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLT 506
+ P +++ +I G +G E ++ A GS+ S ++N +LT
Sbjct: 326 LEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILT 378
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 229/511 (44%), Gaps = 75/511 (14%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
+++ +Q F +A K N+ H+ TY ++IH L + + ++ E+ ++P
Sbjct: 103 VNVKMQFFRWAAK-KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPME 161
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
VIR G A A+ F +I+ Q + ++ N+++ L+ +Y+ VH ++
Sbjct: 162 LSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
++ P+ T + LI A CK + AIR+L+EM GM P +T I+ + ++
Sbjct: 222 NEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 237 ENAKRVFGDILDRGWVPDATTYT-------------------------------VLMDGY 265
A +F ++ PD TYT V+M+
Sbjct: 282 HGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNM 341
Query: 266 I----KLGRLTDAVKVMDEM------------------------------------EDNG 285
I K GRL D +K+ +EM + +G
Sbjct: 342 INFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSG 401
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P+ TY ++I+ FCK + +A LL++M ++ + P A C +ID L + + + AC
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 346 ELWKRLLRKNCMPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
EL++ L ++NC +A + + +I L K G++ +A LFDE + G P++ YN L++G
Sbjct: 462 ELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSG 520
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + L EA M E G P++ +YN+++ G K G + +L M + P+
Sbjct: 521 LARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
S++ ++ L +G E +++ A G
Sbjct: 581 AVSYNTVLSALSHAGMFEEAAELMKEMNALG 611
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 174/405 (42%), Gaps = 55/405 (13%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
++S+ F+ N+ AL +F + P+ TY +I L +A D E+
Sbjct: 271 IISLFFKLDNVHGALSLFEEMRYMYCRPDVF----TYTELIRGLGKAGRIDEAYHFYHEM 326
Query: 105 KQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++ P+ N+ I G AGR + +K F + + +V + NT++ AL +
Sbjct: 327 QREGCKPDTVVMNNM----INFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFE 382
Query: 162 NK-RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+K R V F+ + + P+ FT +ILI CK + +E A+ +L+EM G P
Sbjct: 383 SKSRVSEVFSWFERMKGS-GISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCP 441
Query: 221 VTHTTILG--GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ +++ G R D+ A +F ++ + A Y V++ K GRL DA+ +
Sbjct: 442 AAYCSLIDALGKAKRYDL--ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLF 499
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
DEM G PN Y ++ SG AR + D
Sbjct: 500 DEMSKLGCTPNVYAYNALM--------SGLARACMLD----------------------- 528
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTY 397
+A +++ C+PD + I++ L K G A ++ + +I P ++Y
Sbjct: 529 ----EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSY 584
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
NT+++ + + EA L +M G E ++ TY+ +++ K+
Sbjct: 585 NTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 215/475 (45%), Gaps = 17/475 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHK----------LARARAFDA 96
LV+ + + L A I KF F + Y +I K L +A D
Sbjct: 16 LVANCVKSRKLREAFDIIQTMRKF--KFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDE 73
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L +L+QN ++ C + T+I YG AG+ + A R + SV + N +L
Sbjct: 74 AVELFEQLEQNRKVPCA-YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCIL 132
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
L + +R + +F+ + VPNV T NILI LC++ + A+ + D+M G+
Sbjct: 133 TCLGKKRRVEEALRIFEEMKR--DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGL 190
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN++T ++ +E A +F + D+ P+A T++ L+DG K GR+ DA
Sbjct: 191 FPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYS 250
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ ++M D G P + Y +I +F K + + + +M+ P L +D +
Sbjct: 251 LYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVF 310
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
+ G+ E L++ + +PD S +IH L K G E +LF E+G +
Sbjct: 311 KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 370
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
YN +I G C+S ++ +A +L ++M KG P V TY +I G KI E + EE
Sbjct: 371 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 430
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIV 509
G N +S LI+G + G E ++ G + +WN LL +V
Sbjct: 431 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 485
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 226/485 (46%), Gaps = 29/485 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + +++ ++ AL+IF + + N TY+ +I L R +A + ++++
Sbjct: 131 ILTCLGKKRRVEEALRIFE---EMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMER 187
Query: 107 NPEIKCGENLFITV------IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
LF V I A + E A F ++ + + ++L++ L
Sbjct: 188 -------AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 240
Query: 161 QNKRYDLVHLMFK---NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ R D + +++ + H VP LI++ K E ++ EM G
Sbjct: 241 KCGRVDDAYSLYEKMLDCGH----VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 296
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P+L T + G+ E + +F +I G++PDA +Y++L+ G +K G + ++
Sbjct: 297 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 356
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
M++ G + Y +I+ FCK K +A LL++M + + P+ VID L +
Sbjct: 357 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
++++A L++ + + S++I K G+I EA + +E ++G P++ T
Sbjct: 417 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 476
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+N L+ + ++ E+ EA + M + PN TY++LI G C++ + +EM
Sbjct: 477 WNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 536
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSDLDSG 515
G PN +++ +I GL ++GN E + S A+G + +S S+N ++ L S
Sbjct: 537 KLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN----AMIEGLSSA 592
Query: 516 AGALD 520
A+D
Sbjct: 593 NKAMD 597
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 206/442 (46%), Gaps = 7/442 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P L ++ + + Q L+ A IF G + N T+ S+I L + D
Sbjct: 191 FPNVLTVNIMIDRLCKAQKLEEACSIFE--GMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 248
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
SL ++ + G ++ ++IR++ GR E K + + + +NT ++
Sbjct: 249 YSLYEKMLDCGHVP-GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 307
Query: 158 ALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ + + +F+ + H F +P+ + +ILI L K + M G
Sbjct: 308 CVFKAGETEKGRALFREINAHGF--IPDARSYSILIHGLVKAGLANETYELFYAMKEQGC 365
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
V + + ++ G+ G + A ++ ++ +G P TY ++DG K+ RL +A
Sbjct: 366 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 425
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
+ +E + NG++ N V Y +I+ F K + EA ++++++Q+ P+ ++D L
Sbjct: 426 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 485
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLL 395
+ ++ +A ++ + C P+ S +I+ LC+ K +A + E ++ G P+ +
Sbjct: 486 KAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTI 545
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
TY T+I+G+ ++ + EA L+ G P+ +YN +I+G A + + EE
Sbjct: 546 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEET 605
Query: 456 LDKGCFPNKTSFSLLIEGLYES 477
KGC + + +L++ L+++
Sbjct: 606 RLKGCNIHTKTCVVLLDALHKA 627
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 212/474 (44%), Gaps = 17/474 (3%)
Query: 9 ITAPSCLLQSIGGARCSLSTITVTPPIK--PWPQRLYPKRLVSMIFRQQNLDLALQI--- 63
+ A +C+L +G R + + +K P L+ M+ R+ L+ AL+I
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDD 184
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVI 121
AG F PN T + +I +L +A+ + S+ + C N F ++I
Sbjct: 185 MERAGLF-PNVL----TVNIMIDRLCKAQKLEEACSIFEGMDDKV---CTPNAVTFSSLI 236
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
G GR + A + ++ +L+ + + R + H ++K H
Sbjct: 237 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHT-GC 295
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P++ N + + K + E + E+ + G +P+ +++ ++ G V G
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 355
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F + ++G V D Y ++DG+ K G++ A ++++EM+ G P VTYG +I+
Sbjct: 356 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 415
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + EA L ++ + + +ID + G++++A + + L++K P+
Sbjct: 416 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 475
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ ++ L K +I EA F + P+ +TY+ LI G+C + +A W +M
Sbjct: 476 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 535
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G++PN TY +I G K GN E + G P+ S++ +IEGL
Sbjct: 536 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 589
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 10/239 (4%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE----------A 299
G+ P + L+ +K +L +A ++ M P Y ++I
Sbjct: 5 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK + EA L + + Q + VP + +I GK ++A L +R K +P
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ L K+ ++ EA ++F+E +R ++P++ TYN LI +C +L A + DD
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDD 184
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M G+ PNV T N++I CK +E I E M DK C PN +FS LI+GL + G
Sbjct: 185 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+I LA+ D L E K N IK ++ ++I +G GR + A
Sbjct: 406 TYGSVIDGLAKIDRLDEAYMLFEEAKSNG-IKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + +V + N LL+ALV+ + + + F+ S K PN T +ILI LC+
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQ-SMKDLKCPPNQITYSILINGLCRVR 523
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A EM +G+ PN +T+TT++ G G+I A +F G +PD+ +Y
Sbjct: 524 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 583
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++G + DA + +E G + T V+++A K +
Sbjct: 584 AMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAE 628
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 220/435 (50%), Gaps = 19/435 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV---ESLLTELKQNPEIKCGENL 116
A QIF+ + H N T +++I+ L R + +V +++ +++ + +K N
Sbjct: 158 AAQIFNRMKRLH--LKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK-LGVKVNTNT 214
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
F +I + + A+ +++ F+ S NT+L+ L + N+ DL+ M
Sbjct: 215 FNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMK 274
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N ++PN T NIL+ CK ++ A +V+D M ++P++ T+ ++GG
Sbjct: 275 NNG-----LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCK 329
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G I+ A R+ ++ + +PD TY L++G +++D+ME GV+PN VT
Sbjct: 330 DGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVT 389
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V+++ + K K A N L M + + P +I+ C+ G++ +A + +
Sbjct: 390 YNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMS 449
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
RK ++ +TI+H LC E K+ +A KL +RG ++Y TLI G + +
Sbjct: 450 RKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSV 509
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +LWD+M EK + P++ TYN +I G C G + I L E+L+ G P++T+++ +I
Sbjct: 510 EAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTII 569
Query: 472 EGLYESGNEGEVGKV 486
G EG+V K
Sbjct: 570 LGYCR---EGQVEKA 581
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 150/284 (52%), Gaps = 1/284 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N LI CK + A R++DEM G+ N VT TIL +++A ++
Sbjct: 420 PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 479
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
RG+ D +Y L+ GY K G+ +A+K+ DEM++ + P+ +TY MI C
Sbjct: 480 LSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCH 539
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ ++ + L+++L+ VP +I C EG+VE A + ++++K+ PD
Sbjct: 540 SGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFT 599
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ ++ LC EG + +A KLF+ + +G +TYNT+I+G+C+ EA L +M
Sbjct: 600 CNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEME 659
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
EK + P+ +TYN ++ G KE + ++++G ++T
Sbjct: 660 EKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQT 703
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 207/456 (45%), Gaps = 36/456 (7%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++I+ L + + LL ++K N + N F ++ Y G + A +
Sbjct: 249 SYNTILDVLCKKGKLNEARDLLLDMKNNGLLP-NRNTFNILVSGYCKLGWLKEAAQVIDL 307
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD-----------------------LVHLMF--KN 174
+ + NV V + N L+ L ++ + D L++ F +
Sbjct: 308 MAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSS 367
Query: 175 SRHKFKVV---------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
S F+++ PN T N+++K K+ ++ A L +M G P+ VT T
Sbjct: 368 SLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNT 427
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ GY G + A R+ ++ +G ++ T ++ +L DA K++ G
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+EV+YG +I + K KS EA L D+M +++ +PS +I LC GK + +
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI 547
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGM 404
+ LL +PD +TII C+EG++ +A + ++ + S P L T N L+ G+
Sbjct: 548 DKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C L +A +L++ + KG + TYN +I G CK +E +L EM +K P+
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC 667
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+++ ++ L ++G E + +S G ++ +
Sbjct: 668 YTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQT 703
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGG---YVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
A ++ + M + + PNL+T T++ Y + + +K +F D++ G + T+ +
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G +L++A+ ++ +M+D P+ V+Y
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNT------------------------- 252
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
++D+LC++GK+ +A +L + +P+ + ++ CK G + EA
Sbjct: 253 ----------ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAA 302
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
++ D + ++ P + TYN LI G+C+ ++ EA RL D+M + P+V TYN LI G
Sbjct: 303 QVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGC 362
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ +G ++++M KG PN +++++++ + G G + SG
Sbjct: 363 FDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG 417
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 25/322 (7%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T ++I+H L R D LL+ + E + T+I Y G+ A+K
Sbjct: 456 NSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF-VDEVSYGTLIMGYFKDGKSVEAMKL 514
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ +++ + S+ + NT++ L + + D + N + +VP+ T N +I C
Sbjct: 515 WDEMKEKEIIPSIITYNTMIGGLCHSGKTD-QSIDKLNELLESGLVPDETTYNTIILGYC 573
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ VE A + ++M P+L T +L G G ++ A ++F + +G DA
Sbjct: 574 REGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAV 633
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY ++ G K R +A ++ EME+ + P+ TY ++ A + EA + +
Sbjct: 634 TYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRI 693
Query: 317 LQRKYV-----------------------PSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+++ + P+S + I+ LC +GK +DA + + +
Sbjct: 694 VEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQ 753
Query: 354 KNCMPDNAISSTIIHWLCKEGK 375
K + +++ L K K
Sbjct: 754 KGITLHKSTYISLMEGLIKRRK 775
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 25/250 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I L + D L EL ++ + E + T+I Y G+ E A + +
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLVP-DETTYNTIILGYCREGQVEKAFQFHNK 587
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K + + + + N LL L D +F K K + V T N +I LCK+D
Sbjct: 588 MVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAV-TYNTIISGLCKED 646
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV------- 252
E A +L EM + P+ T+ IL G ++ A+ I+++G +
Sbjct: 647 RFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISL 706
Query: 253 ----------------PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
P++ T++ ++ G+ DA+ ++ E G+ ++ TY +
Sbjct: 707 NKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISL 766
Query: 297 IEAFCKGKKS 306
+E K +KS
Sbjct: 767 MEGLIKRRKS 776
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 178/340 (52%), Gaps = 3/340 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN+ N LI C ++E A++V + M PN+ T+T ++ G G +E A +
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++ G P+ TYT L+ G G L A +++ ME NG+ PN+ T+ V+I+A CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K EA+ L ++++ + + +ID LC+ GK++ A EL ++++ + +PD
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 363 SSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S++I LC++ K+ +A + D E+G S +TY +I + +++D M+
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G+ P++ TY + ++ +C+ G ++ ++ +M+D+G FPN +++ LI G G
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509
Query: 482 EVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSGAGALD 520
+ + G DS+ LL R+V S ++D
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLL-RLVVKKSSSDNSVD 548
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 5/294 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P + N L+ AL + + MP+ NL T+TT++ Y GDI AK+
Sbjct: 38 LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+L G PD+ YT + GY + G LT A +V M G TY ++
Sbjct: 94 HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
EA + M P + + ++ LCE G+ E+A L + + P+
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + +I C G++ A K+F+ + P++ TY LI G+C+S ++ A L+ M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
VE G+EPNV TY LIQG C G+ + R+L M G PN +FS+LI+ L
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 178/368 (48%), Gaps = 16/368 (4%)
Query: 153 NTLLNALVQNKRYDLV-HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+L++ L + + D LM K F VP+ + + LI LC++ + A +L++M
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGF--VPDAHSYSSLIDGLCRQKKLSQATLMLEDM 413
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ + VT+T I+ V E K++F ++ G PD TYTV + Y + GR+
Sbjct: 414 MEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
DA ++ +M D GV PN VTY +I + +A + + M+ + + P+ +
Sbjct: 474 EDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVL 533
Query: 332 IDLLCEEGKVEDACELWKRLLRKNC-----------MPDNA-ISSTIIHWLCKEGKIWEA 379
+ L+ ++ +++ ++WK K+ +P A I S I LC+ ++ EA
Sbjct: 534 LRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEA 593
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K F + ++ PS Y ++I C LT+A L D M + G P++ +Y ++I
Sbjct: 594 KHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISS 653
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
C+ GN + + ++L K ++ + +LI GL + G+ E ++S+ G S
Sbjct: 654 LCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713
Query: 499 DSWNFLLT 506
++ N ++T
Sbjct: 714 NTINAMIT 721
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 191/460 (41%), Gaps = 62/460 (13%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
F N Y+++I A + + + N +C N+ + +I +G+ E
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN---RCSPNVRTYTELIHGLCKSGKVE 264
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFT 187
A+ F R+ + ++ +V + L+ + L+HLM N +VPN +T
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG-----LVPNDWT 319
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
++LI ALCK++ VE A L + G+ N V +T+++ G G I+ A + ++
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G+VPDA +Y+ L+DG + +L+ A ++++M + G++ + VTY ++I+ + S
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+ + D M+ P + CEEG++EDA + +++ + P+ +T+I
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Query: 368 HWLCKEGKIWEAKKLF-------------------------------------------- 383
G + +A F
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQ 559
Query: 384 ----DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
D ER + Y+ I +C L EA + M + P+ Y +I
Sbjct: 560 VLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCC 619
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
C++ + + +L+ M G P+ S+ ++I L E GN
Sbjct: 620 CRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGN 659
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 49/269 (18%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T + +++ C++ +E A ++ +M G+ PNLVT+ T++ GY G + A
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514
Query: 243 FGDILDRGWVPDATTYTVLMDGYIK----------------------------------- 267
F ++ +GW P+ +YTVL+ +K
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAA 574
Query: 268 ------------LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+ RL +A M++ + P+E Y +I+ C+ K +A LLD
Sbjct: 575 DIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDS 634
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + Y+P +I LCE G A E++ LL K D + +I+ L ++G
Sbjct: 635 MTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGS 694
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
+ E L E G PS T N +I G
Sbjct: 695 VAEFSSLLSVMKEHGYQPS-NTINAMITG 722
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 199/450 (44%), Gaps = 73/450 (16%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++R + AG+ + A+ F + K +R++RS N LLN LVQ +F+ R
Sbjct: 97 FDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMR 156
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+P+ FT I+ KA C+ V A L EM MG+ NLV + ++ GY G
Sbjct: 157 CA-GTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIK----------------------------- 267
E A+++ + +G P+ TYT+L+ GY K
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275
Query: 268 -------LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL------- 313
GR+ DA +V DEM D GV+ N Y MI +CK + GE LL
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335
Query: 314 ----------------------------DDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
D M++ + ++ +++ C G ++DA
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGM 404
+LW +L++ +P+ ST++ K GK +A L+ E RG +++T NT+I G+
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C++ +TEA L+ M E + TY LI G+CK+G+ +I EM + G P+
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASG 494
F+ I GL+ + G+V + +A G
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKG 545
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 211/445 (47%), Gaps = 37/445 (8%)
Query: 74 FSHNYDTYHSIIHKL-ARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGR 129
F+ TY+++++ +R DA++ LK+ EI C T++ + AG+
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCS-----TLLDGFFKAGK 425
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
E A+ + + R+V ++NT++N L +N+R +F + ++ + T
Sbjct: 426 TEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMK-EWSCPCDSLTYR 484
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI CK D+ A ++ EM ++G VP++ + + G + ++ +
Sbjct: 485 TLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAK 544
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P+ TY L+ G+ K G L DA + EM + G++PN V++ F + K EA
Sbjct: 545 GLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604
Query: 310 RNLLD-----DMLQR---------------------KYVPSSALCCKVIDLLCEEGKVED 343
+L DM+Q + + + VI LC+ G+V D
Sbjct: 605 NLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVAD 664
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIA 402
A L++ L K +PDN S++IH G I A L DE + P+++TYN+LI
Sbjct: 665 ARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIY 724
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C+S ++ A L++ + KG+ PN TYN LI G CK GN E ++ ++M+ +G P
Sbjct: 725 GLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQP 784
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVV 487
++++LI GL G E K++
Sbjct: 785 TVFTYTILIHGLCTQGYMEEAIKLL 809
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 224/516 (43%), Gaps = 52/516 (10%)
Query: 46 RLVSMIFRQQNLDLALQIFHY---AGKFHPNFSHNYDTYHSIIHKLARARAFDA-VESLL 101
RL++ + + ++ A+ +F AG +F+ + +A+A D V
Sbjct: 134 RLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFT---------VAIMAKAYCRDGRVAHAA 184
Query: 102 TELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
LK+ E+ NL + V+ Y G+ E+A K ++ + +V + L+
Sbjct: 185 DFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGY 244
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
+ R + + K + K+V + LI C++ +E A RV DEM G+ N
Sbjct: 245 CKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVN 304
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+ + T++ GY G + +++ RG D +Y L+DGY + G +T A + D
Sbjct: 305 MFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCD 364
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
M NG +TY ++ FC +A L ML+R VP+ C ++D + G
Sbjct: 365 MMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAG 424
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
K E A LWK L + + +T+I+ LCK ++ EA++LF + S P LTY
Sbjct: 425 KTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYR 484
Query: 399 TLIAGMCESAELTEA--------------------------------GRLWD---DMVEK 423
TLI G C+ +L A G++ D +M K
Sbjct: 485 TLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAK 544
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G+ PN TY LI G+CK GN + + EM++KG PN S+L+ Y G E
Sbjct: 545 GLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604
Query: 484 GKVVSMATASGSVESDSWNFL-LTRIVSDLDSGAGA 518
V+ + ++ S + L + ++ ++S AG
Sbjct: 605 NLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGG 640
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 205/449 (45%), Gaps = 14/449 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ F+ + AL + + + N T +++I+ L + R E
Sbjct: 408 PNEISCSTLLDGFFKAGKTEQALNL--WKETLARGLARNVVTINTVINGLCKNRRMTEAE 465
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
L +K+ C + T+I Y G A + + +E SV N+ +
Sbjct: 466 ELFHRMKE-WSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITG 524
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L K+ V+ + K + PN T LI CK+ ++ A + EM G+ P
Sbjct: 525 LFIAKQSGKVNDIRVEMSAK-GLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKP 583
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
NL + ++ + G ++ A V + D + D + T + +G++ ++
Sbjct: 584 NLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAST------LNIGKVA---HII 634
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+ + + ++ + ++I CK + +ARNL +D+ + ++P + +I
Sbjct: 635 ESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSAS 694
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTY 397
G ++ A L +L P+ +++I+ LCK + A LF++ + +G P+ +TY
Sbjct: 695 GSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITY 754
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
NTLI G C+ TEA +L M+++G++P VFTY +LI G C G +E I++L++M++
Sbjct: 755 NTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIE 814
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PN ++ LI+G GN + K+
Sbjct: 815 NNVDPNFITYWTLIQGYARCGNMKAITKL 843
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 205/476 (43%), Gaps = 72/476 (15%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y+++I+ + VE LL + + + E + T++ Y G A +T
Sbjct: 304 NMFVYNTMINGYCKLGRMGEVEKLL-QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFET 362
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + + + NTLLN D L LM K VVPN +C+ L+
Sbjct: 363 CDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRG-----VVPNEISCSTLL 417
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K E A+ + E + G+ N+VT T++ G + A+ +F + +
Sbjct: 418 DGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCP 477
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMED----------------------------- 283
D+ TY L+DGY KLG L A ++ EME+
Sbjct: 478 CDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDI 537
Query: 284 ------NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
G+ PN VTYG +I +CK +A L +M+++ P+ +C ++
Sbjct: 538 RVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYR 597
Query: 338 EGKVEDACELWKRLLRKNCMPDNAIS--------------------STIIHW------LC 371
EGKV++A + ++L + + D + S S I W LC
Sbjct: 598 EGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLC 657
Query: 372 KEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G++ +A+ LF++ + +G IP TY++LI G S + A L D+M+ + PN+
Sbjct: 658 KLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIV 717
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
TYN LI G CK N + + ++ KG PN +++ LI+G + GN E K+
Sbjct: 718 TYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKL 773
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NI+I LCK V A + +++ G +P+ T+++++ G G I+ A + ++L
Sbjct: 650 NIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLS 709
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
P+ TY L+ G K ++ AV + ++++ G+ PN +TY +I+ CK + E
Sbjct: 710 ARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTE 769
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L M++ P+ +I LC +G +E+A +L +++ N P+ T+I
Sbjct: 770 AFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQ 829
Query: 369 WLCKEGKIWEAKKLFDEFE 387
+ G + KL++E
Sbjct: 830 GYARCGNMKAITKLYNEMH 848
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 37/400 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I + R + A + R+ + + N ++ +L + DL L N
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA-LKVLNQLLSD 222
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
P V T ILI+A + V+ A++++DEM S G+ P++ T+ TI+ G G ++ A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ +G PD +Y +L+ + G+ + K+M +M +PN VTY ++I
Sbjct: 283 FEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K EA NLL M ++ P + +I C EG+++ A E + ++ C+PD
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF--------------------------------- 386
+T++ LCK GK +A ++F +
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 387 ---ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
G P +TYN++I+ +C + EA L DM P+V TYN+++ GFCK
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
++ I +LE M+ GC PN+T++++LIEG+ +G E
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 1/299 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+VF N LI CK + ++ A RVLD M S P+ VT+ ++G RG ++ A +V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L P TYT+L++ + G + +A+K+MDEM G++P+ TY +I CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A ++ ++ + P ++ L +GK E+ +L ++ + C P+
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC++GKI EA L E+G P +Y+ LIA C L A + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
G P++ YN ++ CK G A + + I ++ + GC PN +S++ + L+ SG++
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 2/284 (0%)
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ + ++ +L+ M G P+++ T ++ G+ +I A RV +IL++ PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L++G+ K+ R+ DA +V+D M P+ VTY +MI + C K A +L+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+L P+ +I+ EG V++A +L +L + PD +TII +CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A ++ E +GS P +++YN L+ + + E +L M + +PNV TY++
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI C+ G +E + +L+ M +KG P+ S+ LI G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 180/387 (46%), Gaps = 7/387 (1%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRP 130
+FS + TY+ +I L D +L +L + C + + +I L G
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD---NCQPTVITYTILIEATMLEGGV 244
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A+K + ++ + + NT++ + + D M +N K P+V + NI
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK-GSEPDVISYNI 303
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L++AL + E +++ +M S PN+VT++ ++ G IE A + + ++G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PDA +Y L+ + + GRL A++ ++ M +G P+ V Y ++ CK K+ +A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ + + P+S+ + L G A + ++ PD +++I L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+EG + EA +L + PS++TYN ++ G C++ + +A + + MV G PN
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEML 456
TY +LI+G G E + + +++
Sbjct: 544 TTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 10/313 (3%)
Query: 80 TYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
TY++II + + RAF+ V +L ELK + N+ + + N G+ E K
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNL--ELKGSEPDVISYNILLRALLN---QGKWEEGEK 319
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ +V + + L+ L ++ + + + K + K + P+ ++ + LI A
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAF 378
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C++ ++ AI L+ M S G +P++V + T+L G + A +FG + + G P++
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
++Y + G A+ ++ EM NG++P+E+TY MI C+ EA LL D
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M ++ PS V+ C+ ++EDA + + ++ C P+ + +I + G
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558
Query: 376 IWEAKKLFDEFER 388
EA +L ++ R
Sbjct: 559 RAEAMELANDLVR 571
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 8/221 (3%)
Query: 296 MIEAFCKGKKSG---EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
M++ F + +SG E+ +LL+ M+++ Y P LC K+I + A + + +L
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-IL 150
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
K PD + +I+ CK +I +A ++ D P +TYN +I +C +L
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A ++ + ++ +P V TY +LI+ G E +++++EML +G P+ +++ +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIVS 510
G+ + G ++V GS E D S+N LL +++
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGS-EPDVISYNILLRALLN 310
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 189/372 (50%), Gaps = 4/372 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+VI+ AGR + A+ + K + + + L+N L + + +
Sbjct: 54 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113
Query: 179 FKV-VPNVFTCNILIKALCKKDDVEGAIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDI 236
+ F+ N L+ +LCK V A + M S +VP++V+++ ++ G+ ++
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A++++ ++D VP+ TTY ++G ++ GR+ DA V +EM G P+ +TY +
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I F +K +A L + M+ R P++ ++ LC+E K ++A EL+++++ + C
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD +T+++ C GKI +A ++FDE +G P ++ YN L+ G + + EA +
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGL 474
L+ MV + +P+ ++N++I G K + + + E M D GC P+ +++ LI GL
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413
Query: 475 YESGNEGEVGKV 486
E KV
Sbjct: 414 CGEQRLSEAMKV 425
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 202/411 (49%), Gaps = 17/411 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLL-TELKQN--PEIKCGENLFITVIRNYGLAGRPELAVKT 136
T HS+I +L +A D+ SLL T +K+ P++ L + + + E
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF---- 106
Query: 137 FLRIEKFNVQRSVR-----SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
++ N S R S N+LLN+L + K+ +F + VVP+V + +IL
Sbjct: 107 ---LQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSIL 163
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK D++ A ++ +M + VPN+ T+ L G + +G I +A+ V+ +++ G
Sbjct: 164 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGC 223
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY+ L+ G+ + A ++ + M G PN VTY ++ CK K EA
Sbjct: 224 SPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 283
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L M++R P ++ C GK+E A E++ ++ K PD + ++
Sbjct: 284 LFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 343
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE-KGVEPNV 429
+ GK EA++LF R P +++N +I G+ ++ L +A +++ M + G P++
Sbjct: 344 RAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 403
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
TYN LI G C E +++ +E+ P+ +F++L+E +Y +G++
Sbjct: 404 VTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGHK 454
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 160/302 (52%), Gaps = 6/302 (1%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
TC+ +I+ LCK V+ A+ +L+ M G P++ TH+ ++ I+ A+ F
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE-FLQG 109
Query: 247 LDRGWVPDATT---YTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCK 302
++R A++ Y L++ K ++ A + M + V P+ V+Y ++I+ FCK
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ G A L M+ VP+ ++ L +G++ DA +++ ++ C PD
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
ST+IH K +A +LF+ RG P+ +TYN L+ G+C+ ++ EA L+ MV
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
E+G +P+ TY L+ GFC +G ++ + + +EM+ KG P+ +++ L++G + +G G
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349
Query: 482 EV 483
E
Sbjct: 350 EA 351
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 152/295 (51%), Gaps = 7/295 (2%)
Query: 191 LIKALCKKDDVEGAI---RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ LCK +E A R + E S P+ T +++ G +++A + ++
Sbjct: 17 FLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMI 76
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED--NGVEPNEVTYGVMIEAFCKGKK 305
RG+ PD T+++L++ K ++ +A + + M + + +Y ++ + CK KK
Sbjct: 77 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKK 136
Query: 306 SGEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+A + M+ +R VP +ID C+ ++ A +L+K+++ NC+P+ +
Sbjct: 137 VHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 196
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ L ++G+I +A+ +++E G P ++TY+TLI G + + +A L++ M+ +
Sbjct: 197 AFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G PN TYN L+ G CK E + +M+++GC P+K +++ L+ G G
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVG 311
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 218/445 (48%), Gaps = 22/445 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK-----FHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
++S + +++LD A+ F+ + F + + TY +I+ L +A +DA L
Sbjct: 70 ILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAG---L 126
Query: 102 TELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
++ KC L + GL A + E A F + + + + + ++L++ L
Sbjct: 127 EYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGL 186
Query: 160 VQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+ R D LV LM P ++ LCK ++ A++ + EM
Sbjct: 187 SKAGRVDEARKLVDLMIARGPP-----PTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 241
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P + T++ I+ GY+ G +E A V ++ DR PD +YT+ ++ +GR +A
Sbjct: 242 LRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 301
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
KV + M + G +P+ TYG++I+ FCK A ++L M + P+ + ++D
Sbjct: 302 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGF 361
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS---IP 392
+ ++E+A EL++R+L+ +P +T+I+ LCK K+ EA +L E +R P
Sbjct: 362 VKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEP 421
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
S++TY+ +I G+ + A L +M++ GV P+ FTY LIQ G + +L
Sbjct: 422 SIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELL 481
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYES 477
EEML G FP+ ++ L++ L S
Sbjct: 482 EEMLKAGIFPDDHTYGTLVQILCRS 506
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 165/350 (47%), Gaps = 47/350 (13%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N+LL ALV+ + F++S + PNV + NIL++ +DD E +L EM
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSISE----PNVSSFNILLRGFAARDDFEVVNALLREMK 56
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD-------ILDRGWVPDATTYTVLMDGY 265
+ G+ N TH IL R D++ A F + + PD+ TYT ++DG
Sbjct: 57 ARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGL 116
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K G ++ ++M + EP +TY V++
Sbjct: 117 FKAGNYDAGLEYYEKMVASKCEPTLLTYTVLV---------------------------- 148
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD- 384
D LC+ KVE AC++++ ++RK PD S++I L K G++ EA+KL D
Sbjct: 149 -------DGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDL 201
Query: 385 EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
RG P+ + Y +++AG+C+ + EA + +M + + P V TY+ ++ G+ +G
Sbjct: 202 MIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 261
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+E ++EEM D+ C P+ S+++ IE LY G E KV G
Sbjct: 262 VEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 311
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 232/513 (45%), Gaps = 56/513 (10%)
Query: 62 QIFHYAGKFHPNFSH-NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG--ENLFI 118
Q+ G F + S N +++ ++ A F+ V +LL E+K G + +
Sbjct: 12 QLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVIL 71
Query: 119 TVI---RNYGLA-----GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
+ + R+ A R E A + F IE + SV + +++ L + YD L
Sbjct: 72 SALCARRDLDKAVSYFNSRTEEACRLFEAIEAPD---SV-TYTAIVDGLFKAGNYD-AGL 126
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ K P + T +L+ LCK VE A V +EM G P+++ +++++ G
Sbjct: 127 EYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGL 186
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK-------------- 276
G ++ A+++ ++ RG P A YT ++ G K GR+ +AVK
Sbjct: 187 SKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV 246
Query: 277 ---------------------VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
VM+EM D P+ ++Y + IEA + EA + +
Sbjct: 247 DTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET 306
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+++ P +ID C+EG + A + + + + P+ I + I+ K +
Sbjct: 307 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 366
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTY 432
+ EA +L+ + G +PS +TYNT+I +C+ ++ EA L +M + +EP++ TY
Sbjct: 367 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 426
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
+M+I G K+G + +L EM+D G P+ +++ LI+ L +G +++
Sbjct: 427 SMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLK 486
Query: 493 SGSVESDSWNFLLTRIV--SDLDSGAGALDELL 523
+G D L +I+ SD+D+ L E++
Sbjct: 487 AGIFPDDHTYGTLVQILCRSDVDAAWDLLQEMM 519
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 181/344 (52%), Gaps = 5/344 (1%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++ V + + N L+N Q+ + L F K P++FT LI C
Sbjct: 96 HLQIMGVSNDLYTCNLLMNCFCQSSQPCLAS-SFLGKLMKLGFEPDIFTFTSLINGFCLG 154
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ +E A+ ++++M MG+ P++V +TTI+ G ++NA +F + + G PD Y
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMY 214
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
T L++G GR DA ++ M ++P+ +T+ +I+AF K K +A+ L ++M+Q
Sbjct: 215 TSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ 274
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P+ +I+ LC EG++++A +++ + K C PD +++I+ CK K+ +
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVED 334
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A K+F E ++G + +TY TLI G + A ++ MV +GV PN+ TYN+L+
Sbjct: 335 AMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLH 394
Query: 438 GFCKIGNAKEGIRILEEMLDK---GCFPNKTSFSLLIEGLYESG 478
C G + + I E+M + G PN ++++L+ GL +G
Sbjct: 395 CLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNG 438
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 195/390 (50%), Gaps = 6/390 (1%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + T+ S+I+ + S++ ++ + IK ++ T+I + G + A
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE-MGIKPDVVIYTTIIDSLCKNGHVDNA 195
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F ++E + ++ V +L+N L + R+ L+ + K K+ P+V T N LI
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLR-GMMKRKIKPDVITFNALID 254
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
A K+ + A + +EM M + PN+ T+T+++ G G ++ A+++F + +G P
Sbjct: 255 AFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFP 314
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D YT L++G+ K ++ DA+K+ EM G+ N +TY +I+ F K A+ +
Sbjct: 315 DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVF 374
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK---NCMPDNAISSTIIHWL 370
M+ R P+ ++ LC GKV A +++ + ++ P+ + ++H L
Sbjct: 375 GHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGL 434
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIA-GMCESAELTEAGRLWDDMVEKGVEPNV 429
C GK+ +A +F + ++ + + T+I GMC++ ++ +A L+ + KGV+PNV
Sbjct: 435 CYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNV 494
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
TY +I G + G E + +M + G
Sbjct: 495 VTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 167/331 (50%), Gaps = 12/331 (3%)
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L++L N+ DL M ++ + +P++ L+ + K + I + + MG
Sbjct: 47 LHSLQFNEALDLFSHMVES-----RPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMG 101
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ +L T ++ + A G ++ G+ PD T+T L++G+ R+ +A+
Sbjct: 102 VSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM 161
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++++M + G++P+ V Y +I++ CK A +L + M P + +++ L
Sbjct: 162 SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C G+ DA L + ++++ PD + +I KEGK+ +AK+L++E + SI P++
Sbjct: 222 CNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNI 281
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
TY +LI G+C L EA +++ M KG P+V Y LI GFCK ++ ++I E
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYE 341
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
M KG N +++ LI+G G VGK
Sbjct: 342 MSQKGLTGNTITYTTLIQGF------GLVGK 366
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 146/317 (46%), Gaps = 11/317 (3%)
Query: 81 YHSIIHKL---ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y S+++ L R R D + + + K P++ L ++ L EL +
Sbjct: 214 YTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKEL----Y 269
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + ++ ++ + +L+N L R D MF K P+V LI CK
Sbjct: 270 NEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK-GCFPDVVAYTSLINGFCK 328
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
VE A+++ EM G+ N +T+TT++ G+ G A+ VFG ++ RG P+ T
Sbjct: 329 CKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRT 388
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEM---EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y VL+ G++ A+ + ++M E +GV PN TY V++ C K +A +
Sbjct: 389 YNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFG 448
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
DM +R +I +C+ GKV+DA L+ L K P+ +T+I L +EG
Sbjct: 449 DMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREG 508
Query: 375 KIWEAKKLFDEFERGSI 391
+ EA LF + + +
Sbjct: 509 LMLEAHVLFRKMKEDGV 525
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 49/302 (16%)
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F +++ +P +T L++ K+ + + + ++ GV + T +++
Sbjct: 55 ALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMN 114
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FC+ + A + L +++ + P +I+ C ++E+A + +++ P
Sbjct: 115 CFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKP 174
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCES---------- 407
D I +TII LCK G + A LF++ E I P ++ Y +L+ G+C S
Sbjct: 175 DVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLL 234
Query: 408 -------------------------AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+L +A L+++M++ + PN+FTY LI G C
Sbjct: 235 RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCME 294
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEG-------------LYESGNEGEVGKVVSM 489
G E ++ M KGCFP+ +++ LI G YE +G G ++
Sbjct: 295 GRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITY 354
Query: 490 AT 491
T
Sbjct: 355 TT 356
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 205/401 (51%), Gaps = 10/401 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
T+ S+IH L++A F+A E + E+ ++ P+++ + + R G+ +
Sbjct: 292 TFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFR----TGKLNKCFEL 347
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + K N V S N L+ L+ NK+ + + + H+ + + T +LI LC
Sbjct: 348 WNVMSKNNCCNIV-SYNMLIQGLLDNKKVEQA-ICYWQLLHERGLKADSTTYGLLINGLC 405
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + A+R+L+E + G + +++++ G +G +E A + + ++
Sbjct: 406 KNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSH 465
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+ L++GY++ +L +A+ V+ EM+ P V+Y +I CK ++ +A L +M
Sbjct: 466 VFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEM 525
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L+ P +ID LC KV+ A LW + + K PD + + IIH LC K+
Sbjct: 526 LEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKV 585
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A ++F + + +P L+T+NT++ G+ ++ + EA ++WD ++E G++P++ +YN+
Sbjct: 586 DVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNIT 645
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+G C + I L + LD+G PN ++++L+ + +
Sbjct: 646 FKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVD 686
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 232/529 (43%), Gaps = 78/529 (14%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P+ + P ++ ++ ++N + AL IF A + HP ++H +H I+ +L + V
Sbjct: 5 PKVISPTLVLKLLKAEKNPNAALAIFDSACQ-HPGYAHPPFVFHHILRRLMDPKLVVHVG 63
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLN 157
++ +L + C E++ ++ I+ Y P+ A+ F ++ F +RS N++LN
Sbjct: 64 RIV-DLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLN 122
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
A +++ ++ L F + GM
Sbjct: 123 AFIESNQWREAELFFT------------------------------------YFQTAGMS 146
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PNL T+ ++ + E K + + + G PD +Y L++ K G L DAV++
Sbjct: 147 PNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVEL 206
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVIDLLC 336
DEM GV P+ + Y ++I+ F + +A + +L V PS +I+ LC
Sbjct: 207 FDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLC 266
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLL 395
+ GK++++ E+W R+ + PD S++IH L K G A+K+F E E G P +
Sbjct: 267 KLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVR 326
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMV---------------------------------- 421
TYN +++G+ + +L + LW+ M
Sbjct: 327 TYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLH 386
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-E 480
E+G++ + TY +LI G CK G + +RILEE ++G + ++S ++ GL + G E
Sbjct: 387 ERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLE 446
Query: 481 GEVGKVVSMATASGSVESDSWNFLLTRIVS--DLDSGAGALDELLVKNC 527
V + M + S +N L+ V L+ L E+ K+C
Sbjct: 447 QAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDC 495
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 205/446 (45%), Gaps = 44/446 (9%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVK 135
+Y ++I+ LA++ DAVE L E+ NP++ C L +R E+ +
Sbjct: 186 SYGTLINALAKSGNLLDAVE-LFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKR 244
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + +V SV + N ++N L + + D M+ N K + P++FT + +I L
Sbjct: 245 L---LTESSVYPSVETYNIMINGLCKLGKLDESMEMW-NRMKKNEKSPDLFTFSSMIHGL 300
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD-------------------- 235
K + A +V EM G+ P++ T+ +L G G
Sbjct: 301 SKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV 360
Query: 236 --------------IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+E A + + +RG D+TTY +L++G K G L A+++++E
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E+ G + + Y M+ CK +A L+ M + + +S + +I+ K+
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK-KLFDEFERGSIPSLLTYNTL 400
E+A + + + K+C P +TII+ LCK + +A L + E G P ++TY+ L
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G+C ++ A LW + K ++P++ +N++I G C + I +M C
Sbjct: 541 IDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ + + ++EGLY++G+ E K+
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKI 626
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 41/294 (13%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDT--YHSIIHKLARARAFDAVESLLTEL 104
L++ + + L+ AL+I A N + DT Y S++H L + + L+ ++
Sbjct: 400 LINGLCKNGYLNKALRILEEA----ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQM 455
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
K+N K ++F ++I Y A + E A+ ++ + +V S NT++N L + +R
Sbjct: 456 KKNRR-KLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAER 514
Query: 165 YDLVHLMFK-------------------------------NSRHKF---KVVPNVFTCNI 190
+ +L K N H+ ++ P++ NI
Sbjct: 515 FSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI 574
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I LC V+ A+ + +M + VP+LVTH TI+ G GD A +++ IL+ G
Sbjct: 575 IIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
PD +Y + G R++DA++ + + D G+ PN T+ V++ A K
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 174/350 (49%), Gaps = 22/350 (6%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L +A K + L M +N +VP+V+T ILI + CK ++ A + DEM
Sbjct: 470 LCDASKVEKAFSLFEEMKRNG-----IVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHK 524
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G PN+VT+T ++ Y+ + A +F +L G P+ TYT L+DG+ K G++ A
Sbjct: 525 GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKA 584
Query: 275 VKVMDEM----------------EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++ M +N PN +TYG +++ CK + EA LLD ML
Sbjct: 585 CQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLA 644
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
P+ + VID C+ GK++DA E++ ++ + P+ S+ I L K+ ++
Sbjct: 645 HGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDL 704
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
K+ + E P+++ Y ++ G+C+ + EA +L M EKG PNV TY +I
Sbjct: 705 VLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMID 764
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
GF K G ++ + + +M KGC PN ++ +LI +G E K++
Sbjct: 765 GFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLL 814
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 139/571 (24%), Positives = 238/571 (41%), Gaps = 73/571 (12%)
Query: 13 SCLLQSI-GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHY--AGK 69
SC S+ G +C + + P ++ R+VS + + A+ I H +
Sbjct: 250 SCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSS 309
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLA 127
PN TY ++ R + +L+ + C N +F ++I Y +
Sbjct: 310 CIPNVV----TYRILLSGCLRKGQLGRCKRILSMMITE---GCYPNREIFNSLIHAYCKS 362
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY---DLVHLMFKNSRHKFK--VV 182
A K F ++ K Q N + ++ N+ D++ L+ K VV
Sbjct: 363 RDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVV 422
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
N + + LC + A +++ EM G VP+ T++ ++G +E A +
Sbjct: 423 LNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSL 482
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ G VP TYT+L+D + K G + A K DEM G PN VTY +I A+ K
Sbjct: 483 FEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLK 542
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR------------ 350
K+ A L + ML P+ +ID C+ G++E AC+++ R
Sbjct: 543 AKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDK 602
Query: 351 ---LLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMC 405
L NC N I+ ++ LCK ++ EA +L D G P+ + Y+ +I G C
Sbjct: 603 YFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFC 662
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLI----------------------------- 436
+ +L +A ++ M E+G PN++TY+ I
Sbjct: 663 KIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVV 722
Query: 437 ------QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
G CKIG E +++ +M +KGC PN +++ +I+G +SG + ++
Sbjct: 723 IYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM 782
Query: 491 TASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
+ G NF+ R++ + G LDE
Sbjct: 783 CSKGCAP----NFITYRVLINHCCSNGLLDE 809
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 30/410 (7%)
Query: 70 FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLA 127
H + N TY ++IH +A+ + L + C N+ + +I + A
Sbjct: 522 LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE---GCKPNVVTYTALIDGHCKA 578
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ E A + + R+ + +++ S +K + L H + PNV T
Sbjct: 579 GQIEKACQIYARM-RGDIESSD-----------MDKYFKLDHNNCEG--------PNVIT 618
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
L+ LCK + V+ A +LD M + G PN + + ++ G+ G +++A+ VF +
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+RG+ P+ TY+ +D K RL +KV+ +M +N PN V Y M++ CK K+
Sbjct: 679 ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD 738
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L+ M ++ P+ +ID + GK+E EL++ + K C P+ +I
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798
Query: 368 HWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ C G + EA KL DE ++ P +L++ +I G S E + L D++ E
Sbjct: 799 NHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESV 856
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLD--KGCFPNKTSFSLLIEGL 474
P Y +LI + K G + + +LEE+ NK ++ LIE L
Sbjct: 857 PVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENL 906
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 144/339 (42%), Gaps = 48/339 (14%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F P+ T N LI+ + D ++ A V EM S V + T + G
Sbjct: 205 FGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCRE 264
Query: 239 AKRVFGDILDRG--WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A D++D +VPD Y ++ G + +A+ ++ M + PN VTY ++
Sbjct: 265 A----FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRIL 320
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ + + G + +L M+ P+ + +I C+ A +L+K++++ C
Sbjct: 321 LSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGC 380
Query: 357 MPDNAISSTII-----------------------------------------HWLCKEGK 375
P + + I LC GK
Sbjct: 381 QPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGK 440
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+A K+ E +G +P TY+ +I +C+++++ +A L+++M G+ P+V+TY +
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
LI FCK G ++ + +EML KGC PN +++ LI
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHA 539
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 11/266 (4%)
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
G + D G+ P TTY L+ +++ +L A V EM + T + CK
Sbjct: 199 LGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCK 258
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
G K EA +L+D+ +VP + +++ LCE E+A ++ R+ +C+P+
Sbjct: 259 GGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVT 316
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++ ++G++ K++ G P+ +N+LI C+S + + A +L+ M+
Sbjct: 317 YRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMI 376
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE-------EMLDKGCFPNKTSFSLLIEGL 474
+ G +P YN+ I C + IL+ EMLD G NK + S L
Sbjct: 377 KCGCQPGYLVYNIFIGSVCS-NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCL 435
Query: 475 YESGNEGEVGKVVSMATASGSVESDS 500
+G + K++ G V DS
Sbjct: 436 CGAGKFDQAFKIICEMMGKGFVPDDS 461
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 47/348 (13%)
Query: 77 NYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
N TY +++ L +A R +A E L T L E + ++ VI + G+ + A +
Sbjct: 615 NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEP--NQIVYDAVIDGFCKIGKLQDAQE 672
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV----HLMFKNSRHKFKVVPNVFTCNIL 191
F ++ + ++ + ++ ++ L ++ R DLV M +NS PNV +
Sbjct: 673 VFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENS-----CTPNVVIYTEM 727
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ LCK + A +++ +M G PN+VT+T ++ G+ G IE +F D+ +G
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 787
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEME----------------------------- 282
P+ TY VL++ G L +A K++DEM+
Sbjct: 788 APNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLL 847
Query: 283 ----DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR--KYVPSSALCCKVIDLLC 336
+N P + Y ++I+ + K + A +LL+++ V + L +I+ L
Sbjct: 848 DELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLS 907
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
KV+ A EL+ ++ KN +P+ +I +I L K K EA +L D
Sbjct: 908 HASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSD 955
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A++ + ++D G +P++ TY +I+ F + K A + +ML +V
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVM---------- 244
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS 393
D S + LCK GK EA L DE E +P
Sbjct: 245 -------------------------DRYTLSCFAYSLCKGGKCREAFDLIDEAE-DFVPD 278
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+ YN +++G+CE++ EA + M PNV TY +L+ G + G RIL
Sbjct: 279 TVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILS 338
Query: 454 EMLDKGCFPNKTSFSLLIEGLYES 477
M+ +GC+PN+ F+ LI +S
Sbjct: 339 MMITEGCYPNREIFNSLIHAYCKS 362
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 229/511 (44%), Gaps = 75/511 (14%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
+++ +Q F +A K N+ H+ TY ++IH L + + ++ E+ ++P
Sbjct: 103 VNVKMQFFRWAAK-KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPME 161
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
VIR G A A+ F +I+ Q + ++ N+++ L+ +Y+ VH ++
Sbjct: 162 LSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
++ P+ T + LI A CK + AIR+L+EM GM P +T I+ + ++
Sbjct: 222 NEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 237 ENAKRVFGDILDRGWVPDATTYT-------------------------------VLMDGY 265
A +F ++ PD TYT V+M+
Sbjct: 282 HGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNM 341
Query: 266 I----KLGRLTDAVKVMDEM------------------------------------EDNG 285
I K GRL D +K+ +EM + +G
Sbjct: 342 INFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSG 401
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P+ TY ++I+ FCK + +A LL++M ++ + P A C +ID L + + + AC
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 346 ELWKRLLRKNCMPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
EL++ L ++NC +A + + +I L K G++ +A LFDE + G P++ YN L++G
Sbjct: 462 ELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSG 520
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + L EA M E G P++ +YN+++ G K G + +L M + P+
Sbjct: 521 LARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
S++ ++ L +G E +++ A G
Sbjct: 581 AVSYNTVLSALSHAGMFEEAAELMKEMNALG 611
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 163/353 (46%), Gaps = 5/353 (1%)
Query: 94 FDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
D V L+ ++ + C ++F +IR G AGR + A + +++ + +
Sbjct: 278 LDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVV 337
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK-KDDVEGAIRVLDE 210
+N ++N L + R D +F+ +PNV T N +IKAL + K V +
Sbjct: 338 MNNMINFLGKAGRLDDGLKLFEEMGVS-HCIPNVVTYNTIIKALFESKSRVSEVFSWFER 396
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+ P+ T++ ++ G+ IE A + ++ ++G+ P Y L+D K R
Sbjct: 397 MKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A ++ E+++N + Y VMI+ K + +A NL D+M + P+
Sbjct: 457 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNA 516
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
++ L +++A +++ C+PD + I++ L K G A ++ + +
Sbjct: 517 LMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST 576
Query: 391 I-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
I P ++YNT+++ + + EA L +M G E ++ TY+ +++ K+
Sbjct: 577 IKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 43/226 (19%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN---LFITVIRNYGLAGRPELAVKT 136
Y S+I L +A+ +D L ELK+N CG + ++ +I++ G AGR + A+
Sbjct: 443 AYCSLIDALGKAKRYDLACELFQELKEN----CGSSSARVYAVMIKHLGKAGRLDDAINL 498
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + K PNV+ N L+ L
Sbjct: 499 F------------------------------------DEMSKLGCTPNVYAYNALMSGLA 522
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++ A+ + +M G +P++ ++ IL G G A + ++ + PDA
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAV 582
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+Y ++ G +A ++M EM G E + +TY ++EA K
Sbjct: 583 SYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 208/447 (46%), Gaps = 10/447 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ S+I L +A D L EL N + C + T+I YG G+ A R
Sbjct: 309 TFTSMIGVLCKAERVDEAVELFEELDSNKSVPC-VYAYNTMIMGYGSVGKFNEAYSLLER 367
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ SV + N +L L + + + + + K PN+ + NILI LCK
Sbjct: 368 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE--AMKMDAAPNLTSYNILIDMLCKAG 425
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++E A++V D M G+ PN++T ++ ++ A +F + + PD+ T+
Sbjct: 426 ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG + G++ DA + ++M D+G PN V Y +I F K + + + +M+ R
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P L +D + + G++E L++ + + PD S +IH L K G +
Sbjct: 546 GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDT 605
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KLF E E+G YN +I G C+S ++ +A +L ++M KG++P V TY +I G
Sbjct: 606 YKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDG 665
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVE 497
KI E + EE K N +S LI+G + G E ++ G +
Sbjct: 666 LAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 725
Query: 498 SDSWNFLLTRIVSDLDSGAGALDELLV 524
+ +WN LL +V A +DE LV
Sbjct: 726 TYTWNCLLDALVK-----AEEIDEALV 747
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 219/450 (48%), Gaps = 10/450 (2%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
PQ P+ +V +I R +++ +AL F + + H+ + Y++++ +AR R + +E
Sbjct: 97 PQ---PELVVGVIRRLKDVRVALHYFRWVERKTKQL-HSPEAYNALLMLMARTRNLEYLE 152
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+L E+ N I ++ ++ + + A + KF + + + TL+ A
Sbjct: 153 QILEEMSM-AGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGA 211
Query: 159 LVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L D ++ L+ + ++V ++FT LI ++ V+ A+ +LDEM S
Sbjct: 212 LSAAHEADPMLTLLRQMQEIGYEVTVHLFT--TLICVFAREGRVDAALSLLDEMKSNSFN 269
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+LV + + + G ++ A + F ++ +G VPD T+T ++ K R+ +AV++
Sbjct: 270 ADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVEL 329
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+E++ N P Y MI + K EA +LL+ ++ +PS ++ L
Sbjct: 330 FEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGR 389
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLT 396
+GKVE+A + + ++ + P+ + +I LCK G++ A K+ D E G P+++T
Sbjct: 390 KGKVEEALRILEA-MKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIIT 448
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
N +I +C++ L EA ++ + K P+ T+ LI G + G + + E+ML
Sbjct: 449 VNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKML 508
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
D G PN ++ LI ++ G + + K+
Sbjct: 509 DSGQTPNAVVYTSLIRNFFKCGRKEDGHKI 538
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 210/434 (48%), Gaps = 15/434 (3%)
Query: 47 LVSMIFRQQNLDLALQI---FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
L+ M+ + L+ AL++ AG F PN T + +I +L +A+ D S+
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLF-PNII----TVNIMIDRLCKAQRLDEACSIFLG 471
Query: 104 LKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
L C + F ++I G G+ A + ++ + +L+ +
Sbjct: 472 LDHKV---CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFK 528
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
R + H ++K H+ P++ N + + K ++E + +E+ + G+ P++
Sbjct: 529 CGRKEDGHKIYKEMMHR-GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVR 587
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+++ ++ G V G ++ ++F ++ ++G D Y +++DG+ K G++ A ++++EM
Sbjct: 588 SYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEM 647
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G++P VTYG +I+ K + EA L ++ + + + +ID + G++
Sbjct: 648 KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRI 707
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTL 400
++A + + L++K P+ + ++ L K +I EA F + P+ +TY+ +
Sbjct: 708 DEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIM 767
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G+C+ + +A W +M ++G++PN TY +I G ++GN E + E G
Sbjct: 768 VNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGG 827
Query: 461 FPNKTSFSLLIEGL 474
P+ ++ +IEGL
Sbjct: 828 IPDSACYNAMIEGL 841
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 195/416 (46%), Gaps = 38/416 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG E A+K +++ + ++ ++N +++ L + +R D +F HK P+
Sbjct: 424 AGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV-CTPDSV 482
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL-----------GGYVWR-- 233
T LI L + V A + ++M G PN V +T+++ G +++
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542
Query: 234 ----------------------GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+IE + +F +I +G PD +Y++L+ G +K G
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
D K+ EM++ G+ + Y ++I+ FCK K +A LL++M + P+ V
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
ID L + ++++A L++ K + + S++I K G+I EA + +E ++G
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+ T+N L+ + ++ E+ EA + +M PN TY++++ G CK+ +
Sbjct: 723 TPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFV 782
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLL 505
+EM +G PN +++ +I GL GN E + +SG + +S +N ++
Sbjct: 783 FWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 205/441 (46%), Gaps = 5/441 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + ++ + + Q LD A IF G H + + T+ S+I L R +
Sbjct: 443 FPNIITVNIMIDRLCKAQRLDEACSIF--LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDA 500
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
L ++ + + ++ ++IRN+ GR E K + + + LN ++
Sbjct: 501 YMLYEKMLDSGQTP-NAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMD 559
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ + + +F+ + + + P+V + +ILI L K + ++ EM G+
Sbjct: 560 CVFKAGEIEKGRALFEEIKAQ-GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLH 618
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+ + ++ G+ G + A ++ ++ +G P TY ++DG K+ RL +A +
Sbjct: 619 LDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYML 678
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+E + V+ N V Y +I+ F K + EA +L++++Q+ P++ ++D L +
Sbjct: 679 FEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVK 738
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
++++A ++ + C P+ S +++ LCK K +A + E ++ G P+ +T
Sbjct: 739 AEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 798
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y T+I+G+ + EA L++ G P+ YN +I+G A + + EE
Sbjct: 799 YTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETR 858
Query: 457 DKGCFPNKTSFSLLIEGLYES 477
KGC + +L++ L+++
Sbjct: 859 LKGCRIYSKTCVVLLDALHKA 879
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 6/290 (2%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++E +++ ++ G+ P T ++ ++K +L +A V++ M P Y
Sbjct: 147 NLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYT 206
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I A ++ LL M + Y + L +I + EG+V+ A L +
Sbjct: 207 TLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSN 266
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
+ D + + I K GK+ A K F E + +G +P +T+ ++I +C++ + EA
Sbjct: 267 SFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEA 326
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L++++ P V+ YN +I G+ +G E +LE KGC P+ +++ ++
Sbjct: 327 VELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTC 386
Query: 474 LYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 523
L G E +++ + S+N L+ D+ AG L+ L
Sbjct: 387 LGRKGKVEEALRILEAMKMDAAPNLTSYNILI-----DMLCKAGELEAAL 431
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 8/268 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+ +I ++ + LL E+K P + + +VI R + A
Sbjct: 623 AYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT----YGSVIDGLAKIDRLDEAYML 678
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + V +V ++L++ + R D +L+ + K + PN +T N L+ AL
Sbjct: 679 FEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQK-GLTPNTYTWNCLLDALV 737
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++++ A+ M ++ PN VT++ ++ G A + ++ +G P+
Sbjct: 738 KAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTI 797
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT ++ G ++G + +A + + + +G P+ Y MIE K+ +A L ++
Sbjct: 798 TYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEET 857
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+ S C ++D L + +E A
Sbjct: 858 RLKGCRIYSKTCVVLLDALHKADCLEQA 885
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 190/390 (48%), Gaps = 13/390 (3%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R +NL F K P+F H+ ++YH ++ L ++ F + L E ++ +
Sbjct: 77 RCKNLGFPAHRFFLWAKRIPDFEHSLESYHILVEILGCSKQFALLWDFLIEAREYNYFEI 136
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+F V R Y A P A + F R+ +F ++ V L+ LL++L K + F
Sbjct: 137 TSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFF 196
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
++ F +VP+ T +IL++ + D GA +V DEM V +L+ + +L
Sbjct: 197 DKAK-GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCK 255
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
GD++ A ++F ++ + G PDA ++ + + Y + A +V+D M+ + PN T
Sbjct: 256 SGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYT 315
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ +I+ CK +K +A LLD+M+Q+ P + ++ C+ +V A +L R+
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 353 RKNCMPDNAISSTIIHWLCKEGK------IWEAKKLFDEFERGSIPSLLTYNTLIAGMC- 405
R C+PD + ++ L + G+ IWE ER P++ TY +I G+
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMS-----ERKFYPTVATYTVMIHGLVR 430
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ +L EA R ++ M+++G+ P T ML
Sbjct: 431 KKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 171/370 (46%), Gaps = 12/370 (3%)
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFL---RIEKFNVQRSVRSLNTLLNALVQNKRYDL 167
+ NL V++ G P A + FL RI F + S+ S + L+ L +K++ L
Sbjct: 65 RVSSNLVEQVLKRCKNLGFP--AHRFFLWAKRIPDF--EHSLESYHILVEILGCSKQFAL 120
Query: 168 VHLMFKNSR--HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+ +R + F++ VF I+ +A + + A R + M G+ P +
Sbjct: 121 LWDFLIEAREYNYFEITSKVFW--IVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQ 178
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+L R + +A+ F G VP A TY++L+ G+ ++ + A KV DEM +N
Sbjct: 179 LLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENN 238
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ + Y +++A CK A + +M P + I C+ V A
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAY 298
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
++ R+ R + +P+ + II LCK K+ +A L DE ++G+ P TYN+++A
Sbjct: 299 QVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYH 358
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ E+ A +L M P+ TYNM+++ +IG I E M ++ +P
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTV 418
Query: 465 TSFSLLIEGL 474
+++++I GL
Sbjct: 419 ATYTVMIHGL 428
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A R F +++ G P L+ + A + D+ + G+ P+ TY +++
Sbjct: 157 ASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVR 216
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + + + AR + D+ML+ V ++D LC+ G V+ A ++++ + P
Sbjct: 217 GWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKP 276
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLW 417
D + IH C + A ++ D +R +P++ T+N +I +C++ ++ +A L
Sbjct: 277 DAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
D+M++KG P+ +TYN ++ C ++L M C P++ +++++++ L
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 478 GNEGEVGKV 486
G V ++
Sbjct: 397 GRFDRVTEI 405
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 96/234 (41%), Gaps = 37/234 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y++++ L ++ D + E+ N +K F I +Y A A + R
Sbjct: 245 AYNALLDALCKSGDVDGAYKMFQEMG-NLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDR 303
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK--------------------- 178
++++++ +V + N ++ L +N++ D +L+ K
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 179 -------------FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
K +P+ T N+++K L + + + + M P + T+T
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTV 423
Query: 226 ILGGYVWR-GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
++ G V + G +E A R F ++D G P +TT +L + + G++ D V V+
Sbjct: 424 MIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM-DVVDVL 476
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 168/317 (52%), Gaps = 1/317 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P V T N ++ + CKK V+ A+++L +M +MG PN VT+ ++ G G++E AK
Sbjct: 198 ICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAK 257
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ D+L G TY L+ GY + G++ +A ++ +EM G P VTY ++
Sbjct: 258 ELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGL 317
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK + +AR LLD M+ + +P +I G + +A L+ L ++ P
Sbjct: 318 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSV 377
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I LC+ G + A +L DE + G P + T+ T + G C+ L A L+D+
Sbjct: 378 VTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDE 437
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ +G++P+ F Y I G K+G+ + + EEML +G P+ ++++ I+GL++ GN
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 497
Query: 480 EGEVGKVVSMATASGSV 496
E ++V +G V
Sbjct: 498 LKEASELVKKMLYNGLV 514
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 177/354 (50%), Gaps = 4/354 (1%)
Query: 124 YGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
YGL GR A K + N+ + S NTL+ + L+F R++ +
Sbjct: 315 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYR-SL 373
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P+V T N LI LC+ D++ A+R+ DEM G P++ T TT + G+ G++ AK
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+F ++L+RG PD Y + G +KLG + A + +EM G P+ +TY V I+
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K EA L+ ML VP +I G + A L+ +L K P
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553
Query: 362 ISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +IH G++ A F+ E+G P+++TYN LI G+C+ ++ +A + +M
Sbjct: 554 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM 613
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
KG+ PN +TY +LI C +G+ +E +R+ ++MLD+ P+ + L++ L
Sbjct: 614 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 174/334 (52%), Gaps = 4/334 (1%)
Query: 148 SVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
+V + NT+L++ + + + L+F+ PN T N+L+ L ++E A
Sbjct: 201 TVVTYNTMLDSFCKKGMVQEALQLLFQ--MQAMGCSPNDVTYNVLVNGLSHSGEMEQAKE 258
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
++ +M +G+ ++ T+ ++ GY +G IE A R+ ++L RG VP TY +M G
Sbjct: 259 LIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLC 318
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K GR++DA K++D M + + P+ V+Y +I + + GEA L ++ R PS
Sbjct: 319 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVV 378
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE- 385
+ID LC G ++ A L +++ PD +T + CK G + AK+LFDE
Sbjct: 379 TYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM 438
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
RG P Y T I G + + ++A + ++M+ +G P++ TYN+ I G K+GN
Sbjct: 439 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 498
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
KE ++++ML G P+ +++ +I +G+
Sbjct: 499 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T N+ I L K +++ A ++ +M G+VP+ VT+T+I+ ++ G + A+ +
Sbjct: 480 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAL 539
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++L +G P TYTVL+ Y GRL A+ EM + GV PN +TY +I CK
Sbjct: 540 FLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 599
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K +A N +M + P+ +I+ C G ++A L+K +L + PD+
Sbjct: 600 VRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCT 659
Query: 363 SSTIIHWLCKEGKIWEAKKL 382
+++ L K+ K+ + L
Sbjct: 660 HRSLLKHLNKDYKLHVVRHL 679
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+V T +LI + + ++ AI EM G+ PN++T+ ++ G ++ A
Sbjct: 548 IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAY 607
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
F ++ +G P+ TYT+L++ LG +A+++ +M D ++P+ T+ +++
Sbjct: 608 NFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667
Query: 301 CKGKKSGEARNL 312
K K R+L
Sbjct: 668 NKDYKLHVVRHL 679
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY SIIH A +L E+ P + + +I +Y + GR +LA+
Sbjct: 519 TYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT----YTVLIHSYAVRGRLKLAILH 574
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + V +V + N L+N L + ++ D + F + K + PN +T ILI C
Sbjct: 575 FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK-GISPNKYTYTILINENC 633
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ A+R+ +M + P+ TH ++L
Sbjct: 634 NLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 198/403 (49%), Gaps = 4/403 (0%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
+ P+ +L + ++ R +NL + F K P F H+ ++H ++ L + F
Sbjct: 68 LNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQF 127
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
+ LTE++++ + +F + R Y A P+ A+++F R+++F V+ ++ L+
Sbjct: 128 AILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDK 187
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
LL L + K +F ++++F + ++ ILI + D E A + M
Sbjct: 188 LLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYS--ILISGWGEIGDSEKACDLFQAMLEQ 245
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G +L+ + +L G ++ AK +F D+L + PDA TY++ + Y + A
Sbjct: 246 GCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSA 305
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+V+D+M + PN TY +I+ CK + EA LLD+M+ R P + +
Sbjct: 306 FRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAY 365
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
C+ +V A L R+ + C+PD + ++ L + G+ + ++++ ++ PS
Sbjct: 366 HCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPS 425
Query: 394 LLTYNTLIAGMC-ESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ TY+ +I G C + +L EA + ++ M+++G+ P V T ML
Sbjct: 426 VSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEML 468
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 170/353 (48%), Gaps = 7/353 (1%)
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSR--HKFKVVPNVFTCNILIKALCKKDDVEG 203
Q SV S + L+ L K++ ++ R H +++ +F ++ +A + + +G
Sbjct: 108 QHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFW--LIFRAYSQANLPDG 165
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
AIR + M G+ P + +L R ++ A+++F +R + A TY++L+
Sbjct: 166 AIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNR-FSLTAKTYSILIS 224
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ ++G A + M + G + + Y +++A CKG + EA+N+ DML ++ P
Sbjct: 225 GWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEP 284
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ I C+ V+ A + ++ R N +P+ + II LCK + EA +L
Sbjct: 285 DAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLL 344
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
DE RG P +YN + A C+ E+ A RL M + P+ TYNM+++ +I
Sbjct: 345 DEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRI 404
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL-YESGNEGEVGKVVSMATASG 494
G + + E M+DK +P+ +++S++I G + G E K M G
Sbjct: 405 GRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEG 457
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E + E N + ++ A+ + A + M + P+ K++ +LC+ V
Sbjct: 139 ESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHV 198
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF----ERGSIPSLLTY 397
+ A +L+ + + + S I W G+I +++K D F E+G LL Y
Sbjct: 199 KQAQQLFHQAKNRFSLTAKTYSILISGW----GEIGDSEKACDLFQAMLEQGCPVDLLAY 254
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N L+ +C+ + EA ++ DM+ K VEP+ FTY++ I +C + + R+L++M
Sbjct: 255 NNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRR 314
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
PN +++ +I+ L ++ + E +++ + G V+ D+W++
Sbjct: 315 YNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRG-VKPDTWSY 359
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 205/414 (49%), Gaps = 4/414 (0%)
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
D +E+LL E+ N + +I YG + A F + E F +V +
Sbjct: 11 LDPLETLLKEMVAEGR-PLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFT 69
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L++ LV + ++ L++K K + F N+LI+ + ++ A+ + EM
Sbjct: 70 KLIDILVNSGEFERAELVYKKLVQK-GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P+ T+ ++ G ++ A+ F +L+RG P+ TY +LMD + K+G+L
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ + EM+ G +P+ VTY ++++A C + G AR L M P S +++
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIP 392
L + G+VE+A ++++ ++ + D ++++ L K G + KL E R G P
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP 308
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++NT++ + ++ + A ++ MVE G +P++ +YN+LI + + G+A + ++L
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQML 368
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFLL 505
EEM++ G P +++ LI L G E V+ M TA + ++N L+
Sbjct: 369 EEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 192/405 (47%), Gaps = 11/405 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELK---QNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+ +I R+ D+ + E+K P+ E + ++ G AGR + A
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD----EYTYGFLVNALGKAGRVQEARSF 157
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKAL 195
F + + + ++ + N L++A + + D+ +F R F+ P+V T NIL+ AL
Sbjct: 158 FDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ--PSVVTYNILLDAL 215
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C V A ++ +M G P+ T++T++ G G +E A +VF +++DRG D
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+ K G + K+M EM G P+ ++ +++A K K AR +
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++ P +ID G A ++ + ++ +P+ +++IHWL +G+
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395
Query: 376 IWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EA + +E E G P ++TYN L+ + + E A RL+ M +KGVEP+ +Y +
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
I G E + + ++M GC +K + +LI + +G+
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGD 500
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 156/344 (45%), Gaps = 10/344 (2%)
Query: 56 NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN 115
LD+AL +F A F + TY+ ++ L A A L ++ + C +
Sbjct: 185 QLDMALGLF--AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD---GCSPD 239
Query: 116 LFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-HLMF 172
+ T++ G +GR E A K F + V + + N+LL L + D V LM
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMK 299
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ SR F P+ F+ N ++ AL K + + A V M G P+L+++ ++ Y
Sbjct: 300 EMSRKGFH--PDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYAR 357
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
GD A+++ ++++ G++P+ TY L+ G++ +A V++EME G P+ VT
Sbjct: 358 FGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVT 417
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +++ K ++ A L M + P + ID L + ++++A L+K +
Sbjct: 418 YNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMK 477
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLT 396
C D A+ +I + G +L E + + S LT
Sbjct: 478 AVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVESRLT 521
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 218/457 (47%), Gaps = 44/457 (9%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ-NPEIKCGENL 116
+LA + + +A K ++D Y ++I L+R R F AV +L+ E++Q NP + +
Sbjct: 137 NLAYRFYSWASK-QSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHL-ITPQV 194
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F+ ++R + A AV+ + K+ + LL+AL +N +F++ R
Sbjct: 195 FVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR 254
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+++K P+V L+ CK+ + A VL +M MG+ P++V + +LGGY G +
Sbjct: 255 YRWK--PSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKM 312
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A + ++ + P+AT+YTVL+ K RL +A ++ EM+ NG + + VTY +
Sbjct: 313 GDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTL 372
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK K LLD+M+Q+ + P+ + ++ ++ ++E+ EL + + C
Sbjct: 373 ISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGC 432
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
PD +I +T+I CK G++ E +L++E E + P + T+ +I G E L EA
Sbjct: 433 APDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACE 492
Query: 416 LWDDMV--------------------------------------EKGVEPNVFTYNMLIQ 437
+ +MV KG + NV + + I
Sbjct: 493 YFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIH 552
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G+ KE +M+DK PN +F+ L+ GL
Sbjct: 553 ALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGL 589
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 178/340 (52%), Gaps = 3/340 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN+ N LI C ++E A++V + M PN+ T+T ++ G G +E A +
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++ G P+ TYT L+ G G L A +++ ME NG+ PN+ T+ V+I+A CK
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K EA+ L ++++ + + +ID LC+ GK++ A EL ++++ + +PD
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 363 SSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S++I LC++ K+ +A + D E+G S +TY +I + +++D M+
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G+ P++ TY + ++ +C+ G ++ ++ +M+D+G FPN +++ LI G G
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509
Query: 482 EVGKVVSMATASG-SVESDSWNFLLTRIVSDLDSGAGALD 520
+ + G DS+ LL R+V S ++D
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLL-RLVVKKSSSDNSVD 548
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 5/294 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P + N L+ AL + + MP+ NL T+TT++ Y GDI AK+
Sbjct: 38 LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+L G PD+ YT + GY + G LT A +V M G TY ++
Sbjct: 94 HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
EA + M P + + ++ LCE G+ E+A L + + P+
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ + +I C G++ A K+F+ + P++ TY LI G+C+S ++ A L+ M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
VE G+EPNV TY LIQG C G+ + R+L M G PN +FS+LI+ L
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 191/421 (45%), Gaps = 33/421 (7%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPE 131
F N Y+++I A + + + N +C N+ + +I +G+ E
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN---RCSPNVRTYTELIHGLCKSGKVE 264
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFT 187
A+ F R+ + ++ +V + L+ + L+HLM N +VPN +T
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG-----LVPNDWT 319
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
++LI ALCK++ VE A L + G+ N V +T+++ G G I+ A + ++
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G+VPDA +Y+ L+DG + +L+ A ++++M + G++ + VTY ++I+ + S
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+ + D M+ P + CEEG++EDA + +++ + P+ +T+I
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Query: 368 HWLCKEGKIWEAKKLFDEFE----RGSIPSLLTYNTLIAGMCESAELTEAGRLW------ 417
G + +A F FE +G P+ +Y L+ + + + + +W
Sbjct: 500 RGYANLGLVSQA---FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556
Query: 418 ------DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+D+ E+ + Y+ I+ C++ +E M + P++ ++ +I
Sbjct: 557 DLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616
Query: 472 E 472
+
Sbjct: 617 D 617
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 7/400 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++I+ L + + LL ++K N N F ++ Y G + A +
Sbjct: 85 SYNTILDVLCKKGKLNEARDLLLDMKNNGLFP-NRNTFNILVSGYCKLGWLKEAAEVIDI 143
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + NV VR+ TL+ L ++ + D ++ K++P+V T N+LI +
Sbjct: 144 MARNNVLPDVRTYTTLIGGLCKDGKIDEA-FRLRDEMENLKLLPHVVTYNMLINGCFECS 202
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++DEM G+ PN VT+ ++ YV G ++NA + + G+ PD T+
Sbjct: 203 SSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFN 262
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L +GY K GRL++A ++MDEM G++ N VT ++ C +K +A LL +R
Sbjct: 263 TLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKR 322
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
Y +I + GK W + K +P T+I LC+ GK ++
Sbjct: 323 GYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQS 378
Query: 380 -KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K + E G +P TYNT+I G C ++ +A + MV+K +P++FT N+L++G
Sbjct: 379 IDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRG 438
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
C G + +++ + + KG + +F+ +I GL E G
Sbjct: 439 LCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEG 478
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 174/341 (51%), Gaps = 17/341 (4%)
Query: 151 SLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
S NT+L+ L + N+ DL+ M N + PN T NIL+ CK ++ A
Sbjct: 85 SYNTILDVLCKKGKLNEARDLLLDMKNNG-----LFPNRNTFNILVSGYCKLGWLKEAAE 139
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
V+D M ++P++ T+TT++GG G I+ A R+ ++ + +P TY +L++G
Sbjct: 140 VIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCF 199
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
+ +++DEME GV+PN VTY V+++ + K K A N L M + + P
Sbjct: 200 ECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 259
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ + C+ G++ +A + + RK ++ +TI+H LC E K+ +A KL
Sbjct: 260 TFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 319
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+RG ++Y TLI G + + WD+M EK + P++ TY +I G C+ G
Sbjct: 320 SKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ I E+L+ G P++T+++ +I G EG+V K
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCR---EGQVDKA 413
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 170/343 (49%), Gaps = 5/343 (1%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHL---MFKNSRHKFKVVPNVFTCNILIKALC 196
+++ +++ ++ +LNTL+ ALV+ V+L +F + K V N T NILI C
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDV-IKLGVEVNTNTFNILICGCC 59
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
++ + AI ++ +M P+ V++ TIL +G + A+ + D+ + G P+
Sbjct: 60 IENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRN 119
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+ +L+ GY KLG L +A +V+D M N V P+ TY +I CK K EA L D+M
Sbjct: 120 TFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEM 179
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
K +P +I+ E EL + K P+ + ++ W KEGK+
Sbjct: 180 ENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKM 239
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A + E G P +T+NTL G C++ L+EA R+ D+M KG++ N T N +
Sbjct: 240 DNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 299
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ C + ++L +G F ++ S+ LI G ++ G
Sbjct: 300 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG 342
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 153/323 (47%), Gaps = 39/323 (12%)
Query: 211 MPSMGMVPNLVTHTTILGG---YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
M + + PNL+T T++ Y + + +K +F D++ G + T+ +L+ G
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+L++A+ ++ +M+ P+ V+Y +++ CK K EAR+LL DM P+
Sbjct: 61 ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++ C+ G +++A E+ + R N +PD +T+I LCK+GKI EA +L DE E
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI---------- 436
+ P ++TYN LI G E + + L D+M KGV+PN TYN+++
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240
Query: 437 -------------------------QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
G+CK G E R+++EM KG N + + ++
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300
Query: 472 EGLYESGNEGEVGKVVSMATASG 494
L + K++S A+ G
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRG 323
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 157/358 (43%), Gaps = 16/358 (4%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+ Y AGR A + + + ++ + +LNT+L+ L ++ D + + ++
Sbjct: 261 FNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 320
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ V V + LI K G DEM ++P+++T+ T++GG G
Sbjct: 321 KRGYFVDEV-SYGTLIMGYFKV----GKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ + ++L+ G VPD TTY ++ GY + G++ A ++M +P+ T ++
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNIL 435
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ C +A L + + + +I LCEEG+ E+A +L + K
Sbjct: 436 VRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKL 495
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD + I+ L G++ EA +EF G + + I+ L +
Sbjct: 496 GPDCYTHNAILSALADAGRMKEA----EEFMSGIVEQGKLQDQTIS-------LNKRKTE 544
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ +PN ++ I C G K+ + +++E KG +K+++ L+EGL
Sbjct: 545 SSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGL 602
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 209/464 (45%), Gaps = 79/464 (17%)
Query: 90 RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL----AGRPELAVKTFLRIEKFNV 145
R R DA++ +L ++ PE+ C +LF I GL + L + + K
Sbjct: 147 RRRTSDAMDIVL---RRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRC 203
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
V + T++N L++ + D + +F + P+V T + +I AL K ++ A
Sbjct: 204 PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS-PDVVTYSSIISALSKTQAMDKAT 262
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+V M G++P+ + +T+++ GY G + A +F + G PD TYT LMD
Sbjct: 263 QVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYL 322
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE--------------------------- 298
K G+ T+A K+ D + G +P+ TYG ++
Sbjct: 323 CKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGH 382
Query: 299 --------AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
A+ K K EA + +M Q+ P V+D+LC G+V+DA +
Sbjct: 383 HIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNS 442
Query: 351 LLRKNCMPDNAISSTIIH-------W----------------------------LCKEGK 375
L + P+ + +T+IH W LCK+G+
Sbjct: 443 LKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGR 502
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ EAK LFD R I P+ TYNTLI G C ++ EA +L MV GV+P+ TYN
Sbjct: 503 VIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNT 562
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+I G+ + G ++G+ +L EM KG P ++ +L++GL+++G
Sbjct: 563 IINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAG 606
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 7/282 (2%)
Query: 204 AIRVLDEMPSMGM---VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
AI + + MP G PN+ T+ ++G G ++ A G ++ G ++
Sbjct: 80 AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139
Query: 261 LMDGYIKLGRLTDAVK-VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G R +DA+ V+ M + G +P+ +Y ++++ C K S +A +LL M
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199
Query: 320 K-YVPSSALC-CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
K P + VI+ L EG+++ A L+ +L + PD S+II L K +
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 259
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++F + G +P + Y +L+ G C S + EA ++ M GVEP+V TY L+
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 319
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK G + E +I + ++ +G P+ T++ L+ G G
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEG 361
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 187/417 (44%), Gaps = 50/417 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + R+ LD A +F P S + TY SII L++ +A D + T + +
Sbjct: 213 VINGLLREGQLDKAYSLFDAMLDRGP--SPDVVTYSSIISALSKTQAMDKATQVFTRMVK 270
Query: 107 NPEI-KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR- 164
N + C ++ +++ Y +G+P+ A+ F ++ + V+ V + L++ L +N +
Sbjct: 271 NGVMPDC--IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 328
Query: 165 --------------------------------------YDLVHLMFKNSRHKFKVVPNVF 186
+DL+ LM K ++ ++F
Sbjct: 329 TEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG---MQLGHHIF 385
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N+++ A K + V+ A+ V M G+ P++V + T+L G +++A F +
Sbjct: 386 --NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 443
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G P+ +T L+ G + ++ EM D G+ + + + ++ CK +
Sbjct: 444 KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRV 503
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA+NL D M++ P++ +ID C +GK+++A +L ++ P + +TI
Sbjct: 504 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 563
Query: 367 IHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
I+ + G+I + L E + +G P ++TY L+ G+ ++ A L+ M++
Sbjct: 564 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 137/266 (51%), Gaps = 19/266 (7%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ TY +++ +LGRL A + + G+ + + + +++ C +++ +A
Sbjct: 96 APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDA-- 153
Query: 312 LLDDMLQRKYVPSSALCCK--------VIDLLCEEGKVEDACELWKRLL--RKNCMPDNA 361
+D +L+R +P L CK ++ LC++ + A +L + + C D
Sbjct: 154 -MDIVLRR--MPE--LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVV 208
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+T+I+ L +EG++ +A LFD +RG P ++TY+++I+ + ++ + +A +++ M
Sbjct: 209 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 268
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V+ GV P+ Y L+ G+C G KE I I ++M G P+ +++ L++ L ++G
Sbjct: 269 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 328
Query: 481 GEVGKVV-SMATASGSVESDSWNFLL 505
E K+ S+ +S ++ LL
Sbjct: 329 TEARKIFDSLVKRGHKPDSTTYGTLL 354
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 183/344 (53%), Gaps = 6/344 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHK--FKVVPNVFTCNILIKALCKKDDVEGAI 205
S+ N +L A+ + + YD+V ++K + ++ P+++TCNIL+ C+ A+
Sbjct: 9 SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 68
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
L +M +G+ P++VT ++++ G+ I++A V G + G D T+L+D
Sbjct: 69 SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 128
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K + A++V+ M+D G+ PN VTY +I CK + +A L +M +K P+
Sbjct: 129 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 188
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD- 384
+ID + GK+ ++K +++ + P+ S++I+ LC ++ EA K+ D
Sbjct: 189 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 248
Query: 385 EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+G P+++TY+TL G +S+ + + +L DDM ++GV N + N LI+G+ + G
Sbjct: 249 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 308
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+ + M G PN S+++++ GL+ + GEV K +S
Sbjct: 309 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN---GEVEKALS 349
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 165/349 (47%), Gaps = 6/349 (1%)
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
+ +L P+I +L + + L+ + AV ++EK ++R V L++ L
Sbjct: 74 MMKLGIEPDIVTASSL----VNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLC 129
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
+N+ + K + + + PNV T + LI LCK + A R L EM S + PN+
Sbjct: 130 KNRLVVPALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 188
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+T + ++ Y RG + V+ ++ P+ TY+ L+ G R+ +A+K++D
Sbjct: 189 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 248
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G PN VTY + F K + + LLDDM QR ++ C +I + GK
Sbjct: 249 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 308
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNT 399
++ A ++ + +P+ + ++ L G++ +A F+ ++ + ++TY
Sbjct: 309 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 368
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+I GMC++ + EA L+ + K VEP+ Y ++I + G E
Sbjct: 369 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 417
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+GR A + ++ + +V + + L++A + + V ++K + + PNVF
Sbjct: 166 SGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYK-MMIQMSIDPNVF 224
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T + LI LC + V+ AI++LD M S G PN+VT++T+ G+ +++ ++ D+
Sbjct: 225 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 284
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
RG + + L+ GY + G++ A+ V M NG+ PN +Y +++ +
Sbjct: 285 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 344
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+A + + M + + +I +C+ V++A +L+ +L K PD + +
Sbjct: 345 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 404
Query: 367 IHWLCKEGKIWEAKKL 382
I L + G EA L
Sbjct: 405 IAELNRAGMRTEADAL 420
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 6/200 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N TY S+I+ L D +L + C N+ + T+ + + R + +
Sbjct: 222 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISK---GCTPNVVTYSTLANGFFKSSRVDDGI 278
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
K + + V + S NTL+ Q + DL +F ++PN+ + NI++
Sbjct: 279 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN-GLIPNIRSYNIVLAG 337
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
L +VE A+ + M +++T+T ++ G ++ A +F + + PD
Sbjct: 338 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 397
Query: 255 ATTYTVLMDGYIKLGRLTDA 274
YT+++ + G T+A
Sbjct: 398 FKAYTIMIAELNRAGMRTEA 417
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 222/472 (47%), Gaps = 21/472 (4%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
P+ + Q++ P + ++ R +NL + F K P F H+ ++YH ++ L ++
Sbjct: 70 PLTAFSQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQ 129
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
F + L+++++ + +F + R Y A P A++ F ++ F V+ V ++
Sbjct: 130 FPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVD 189
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
LL L + K F + +V+PN T +IL++ D A ++ +EM
Sbjct: 190 QLLYVLCKRKHVKQAQEFF--DKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRE 247
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G ++V + ++L G+++ A ++F ++ G PDA +Y++ + Y ++ +
Sbjct: 248 RGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHS 307
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A +V+D M + PN TY +++ CK +K EA LLD+M++R P +
Sbjct: 308 AFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQA 367
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
C+ +V A L R+ ++NCMPD + ++ L + G+ ++ ERG P
Sbjct: 368 FHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYP 427
Query: 393 SLLTYNTLIAGMC-ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ TY ++ G C + +L EA + ++ M++ G+ P T +L +G + E I +
Sbjct: 428 AASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFS-EQIDV 486
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
L +++ S S +I+ E+ V+ ASG + S+ N
Sbjct: 487 LAGKMER-------STSCVIQ---------ELSSVMRGEKASGRLRSEEQNL 522
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 5/333 (1%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV--PNVFTCNILIKALCKKDDVEGA 204
R S NT+L AL + D + + H+ ++ PN + L++ALC A
Sbjct: 54 RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L M G+ P++VT+ T++ G D++ A + ++ + G P+ Y+ L+ G
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y K GR KV +EM G+EP+ V Y +I++ C+ K +A ++D M +R P+
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+I+ +C+EG V +A +L K + K PD +T+I L ++ EA L +
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE 293
Query: 385 EFERGSI---PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E +G P L+T+N++I G+C+ + +A ++ M E G N+ +N+LI G +
Sbjct: 294 EMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ K+ + +++EM G P+ ++S+LI G
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGF 386
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 202/489 (41%), Gaps = 106/489 (21%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++++ L R DA LL + P LA RP
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPR----------------LASRP--------- 92
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ S TL+ AL ++R + + S V P+V T LI+ LC
Sbjct: 93 --------NAISYTTLMRALCADRRAAQAVGLLR-SMQDCGVRPDVVTYGTLIRGLCDAA 143
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
DV+ A+ +L+EM G+ PN+V ++ +L GY G E+ +VF ++ RG PD YT
Sbjct: 144 DVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYT 203
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+D + G++ A +VMD M + G+EPN VTY V+I + CK EA +L +M ++
Sbjct: 204 ALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEK 263
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR--KNCMPDNAISSTIIHWLCKEG--- 374
P +I L ++++A L + +++ PD +++IH LCK G
Sbjct: 264 GVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMR 323
Query: 375 --------------------------------KIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
K+ +A +L DE G P TY+ LI
Sbjct: 324 QALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILI 383
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEP---------------------------------- 427
G C+ ++ A +M +G+EP
Sbjct: 384 NGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL 443
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+ Y+ +I G K G K L++M+D+G P+ ++S+ I +SG+ +V+
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVL 503
Query: 488 SMATASGSV 496
TASG V
Sbjct: 504 KQMTASGFV 512
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 195/412 (47%), Gaps = 7/412 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I L A D LL E+ ++ I+ ++ ++ Y GR E K F
Sbjct: 131 TYGTLIRGLCDAADVDTAVELLNEMCES-GIEPNVVVYSCLLHGYCKTGRWESVGKVFEE 189
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ ++ V L+++L ++ + + + + PNV T N+LI ++CK+
Sbjct: 190 MSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTER-GLEPNVVTYNVLINSMCKEG 248
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL--DRGWVPDATT 257
V A+ + M G+ P++VT+ T++ G +++ A + +++ + PD T
Sbjct: 249 SVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMT 308
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ ++ G K+G + A++V M +NG N V + ++I + K +A L+D+M
Sbjct: 309 FNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMA 368
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
P S +I+ C+ +VE A + + P+ ++ +C +G +
Sbjct: 369 SSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMG 428
Query: 378 EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
+A+ LF+E +R Y+T+I G +S E A DM+++G+ P+ TY++ I
Sbjct: 429 QARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPIN 488
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
F K G+ R+L++M G P+ F LI+G G +G+ K++ +
Sbjct: 489 MFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY---GAKGDTEKILEL 537
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 10/310 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+++I L+ D +LL E+ Q E + +L F +VI G A++
Sbjct: 271 TYNTLITGLSSVLEMDEAMALLEEMMQG-ETRVRPDLMTFNSVIHGLCKIGWMRQALQVR 329
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + ++ + N L+ L++ +K + LM + + + P+ FT +ILI C
Sbjct: 330 AMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQ--PDSFTYSILINGFC 387
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K VE A L EM GM P V + +L +G + A+ +F + +DR DA
Sbjct: 388 KMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAA 446
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y+ ++ G K G A + + +M D G+ P+ VTY + I F K A +L M
Sbjct: 447 AYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQM 506
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+VP A+ +I +G E EL + + K+ D I STI+ L G
Sbjct: 507 TASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL---GAS 563
Query: 377 WEAKKLFDEF 386
E +KL
Sbjct: 564 IEGQKLLQSL 573
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 360 NAIS-STIIHWLCKEGKIWEA----KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAG 414
+A+S +T++ LC++G + A + + E S P+ ++Y TL+ +C +A
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L M + GV P+V TY LI+G C + + +L EM + G PN +S L+ G
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 475 YESGNEGEVGKVVSMATASGSVESD 499
++G VGKV + G +E D
Sbjct: 175 CKTGRWESVGKVFEEMSGRG-IEPD 198
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 159/298 (53%), Gaps = 7/298 (2%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NIL ALCK V+ A+ +LDE+ SM + ++ +TT++ GY +G A+ +F ++ +
Sbjct: 404 NILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEE 463
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
RG+ PD Y VL G+ + +A+ +++ ME GVEPN T+ ++IE C K E
Sbjct: 464 RGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEE 523
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE------LWKRLLRKNCMPDNAI 362
A + + S + +++ CE +E + E L + +L N P +
Sbjct: 524 AEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVM 583
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S I LC G + A LF+ F G P +TY +I G C++ L EA L+ DM
Sbjct: 584 YSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMK 643
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
E+G+ P+ TY ++I G+CK+ +E + ++M ++G P+ +++++I+GL SG+
Sbjct: 644 ERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGH 701
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 198/460 (43%), Gaps = 29/460 (6%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
K L + Q N LA F H FSHN TY SII L ++SL ++
Sbjct: 63 KILQKLYLYQNNPSLAYSYFTQLKNQH-GFSHNIQTYTSIIRILCYYNLDRKLDSLFLDI 121
Query: 105 ----KQNPEIKCG---ENLFITV--------IRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
KQ+P + ++LF V + N G + V + +E +
Sbjct: 122 IDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFN-AFNGFVKACVSQNMFVEAIDFLLQT 180
Query: 150 R----------SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
R S N L+N LV++ D+ +F + F ++ N +T I+IKALCKK
Sbjct: 181 RKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFK-SFGLIFNEYTYTIVIKALCKKG 239
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D E +RV DEM G+ + + T + G + V D R YT
Sbjct: 240 DWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYT 299
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ G+ +L +A V EME G+ P+ Y ++ +C + +A + M+ R
Sbjct: 300 AVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISR 359
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ + ++ L E G+ + ++++ D + + LCK GK+ +A
Sbjct: 360 GIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDA 419
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ DE + + + Y TLI G + EA L+ +M E+G +P+V YN+L G
Sbjct: 420 VGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAG 479
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
F + E + +L M +G PN T+ ++IEGL +G
Sbjct: 480 FFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAG 519
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 132/328 (40%), Gaps = 43/328 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
Y+ + L + D +L ELK + ++ + T+I Y L G+P A F
Sbjct: 402 AYNILFDALCKLGKVDDAVGMLDELK-SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKE 460
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC--- 196
+E+ + V + N L +N R D + N V PN T I+I+ LC
Sbjct: 461 MEERGFKPDVVAYNVLAAGFFRN-RTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAG 519
Query: 197 --------------------------------------KKDDVEGAIRVLDEMPSMGMVP 218
K +++ A +L M M M P
Sbjct: 520 KVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKP 579
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ V ++ I G++E A +F + G+ PDA TYT++++GY K L +A ++
Sbjct: 580 SKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELF 639
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M++ G+ P+ VTY +MI +CK EA L DM +R P +I L
Sbjct: 640 KDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNS 699
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTI 366
G E A +L+ ++ P + I
Sbjct: 700 GHTEIAFQLYNEMIDMGMTPGATLKRCI 727
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 174/333 (52%), Gaps = 2/333 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + F V N+L+ LV D+ +F + + P+ FT N+L+ A+ K
Sbjct: 745 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMK-ELGCGPDEFTYNLLLDAMGKS 803
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E ++V +EM G VT+ TI+ G V +E A ++ +++ +G+ P TY
Sbjct: 804 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 863
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+DG +K GR+ DA + +EM + G + N Y +++ + + +L DM+
Sbjct: 864 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 923
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +ID LC+ G++ D +++LL PD + +I L K ++ E
Sbjct: 924 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 983
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A LF+E + +G +P+L TYN+LI + ++ + EAG+++++++ KG +PNVFTYN LI+
Sbjct: 984 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1043
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
G+ G+ M+ GC PN +++ L
Sbjct: 1044 GYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 162/332 (48%), Gaps = 37/332 (11%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ F C LIK LCK+ A ++ + S G+ + +++ G V I+ A+ +F
Sbjct: 720 DFFLCP-LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 778
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ + G PD TY +L+D K R+ + +KV +EM G E VTY +I K
Sbjct: 779 AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 838
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA------------------- 344
++ +A +L +++ + + P+ ++D L + G++EDA
Sbjct: 839 RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 898
Query: 345 ----------------CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FE 387
C L++ ++ + PD + II LCK G++ + F + E
Sbjct: 899 NILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 958
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P L+TYN LI G+ +S L EA L+++M +KG+ PN++TYN LI K G A E
Sbjct: 959 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1018
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++ EE+L KG PN +++ LI G SG+
Sbjct: 1019 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1050
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 11/377 (2%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQR---------SVRSLNTLLNALVQNKRYDLVHL 170
V+ Y G VK+ E V R SVR+ + L+ A + + + V
Sbjct: 157 VLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 216
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ + V PNV++ I I+ L + + A R+L +M + G P+++THT ++
Sbjct: 217 LLRE-MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G I +AK VF + PD TY L+D + G +++ + M+ +G N
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
V Y +I+A C+ + EA + D+M Q+ VP +I + + DA EL+K
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAE 409
+ P+ I++ K G+ +A + ++ + +G +P ++ N ++ G+ +S
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 455
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L A R++ ++ GV P+ TY M+I+ K E ++I +M++ C P+ + +
Sbjct: 456 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 515
Query: 470 LIEGLYESGNEGEVGKV 486
LI+ LY++G E ++
Sbjct: 516 LIDTLYKAGRGDEAWRI 532
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 3/377 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ +I L A + + ++K++ + K +IT++ +G G + ++ +
Sbjct: 267 THTVLIQVLCDAGRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNA 325
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ +V + +++AL Q R MF + K +VP ++ N LI K D
Sbjct: 326 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSYNSLISGFLKAD 384
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+ + M G PN TH + Y G+ A + + + +G VPD
Sbjct: 385 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 444
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ G K GRL A +V E++ GV P+ +TY +MI+ K K EA + DM++
Sbjct: 445 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 504
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP +ID L + G+ ++A ++ +L N P + +T++ L +EGK+ E
Sbjct: 505 NCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 564
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L +E + P+L+TYNT++ +C++ + +A + M KG P++ +YN +I G
Sbjct: 565 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 624
Query: 439 FCKIGNAKEGIRILEEM 455
K E I +M
Sbjct: 625 LVKEERYNEAFSIFCQM 641
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 174/353 (49%), Gaps = 8/353 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+V N +T N L+ L K A+ V M G+VP++ T++ ++ + R D+E
Sbjct: 156 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ G P+ +YT+ + + R +A +++ +ME+ G +P+ +T+ V+I+
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C + +A+++ M + P ++D + G + E+W + + + DN
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM-KADGYNDN 334
Query: 361 AISST-IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
++ T +I LC+ G+++EA ++FDE ++G +P +YN+LI+G ++ +A L+
Sbjct: 335 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 394
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M G +PN +T+ + I + K G + + I+ E M KG P+ + + ++ GL +SG
Sbjct: 395 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 454
Query: 479 NEGEVGKVVSMATASGSVESDSWNFLLT----RIVSDLDSGAGALDELLVKNC 527
G +V A G V D+ + + S D +++ NC
Sbjct: 455 RLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 506
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 213/466 (45%), Gaps = 22/466 (4%)
Query: 74 FSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGR 129
++ N Y ++I L + R F+A+E + E+KQ PE + + ++I + A R
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGIVPE----QYSYNSLISGFLKADR 385
Query: 130 PELAVKTFLRIE----KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
A++ F ++ K N V +N + K LM +VP+V
Sbjct: 386 FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG-----IVPDV 440
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
N ++ L K + A RV E+ +MG+ P+ +T+T ++ + A ++F D
Sbjct: 441 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 500
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+++ VPD L+D K GR +A ++ ++++ +EP + TY ++ + K
Sbjct: 501 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 560
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
E +LL++M Y P+ ++D LC+ G V DA ++ + K C+PD + +T
Sbjct: 561 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNT 620
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD-MVEKG 424
+I+ L KE + EA +F + ++ IP T T++ + + EA + D ++ G
Sbjct: 621 VIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 680
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ + + + L++G K ++ I E + G + LI+ L + E
Sbjct: 681 SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 740
Query: 485 KVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
++V + G S+++ +N L+ +V + +D G E+ C
Sbjct: 741 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 786
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F+++ K +V +CN +++ + V V D M + N+ T I GG
Sbjct: 77 FRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 136
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G + +A + + G V +A TY L+ +K G +A++V M +GV P+
Sbjct: 137 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 196
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY V++ AF K + LL +M P+ I +L + + ++A + ++
Sbjct: 197 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 256
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAEL 410
+ C PD + +I LC G+I +AK +F + ++ P +TY TL+ ++ +
Sbjct: 257 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 316
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+W+ M G NV Y +I C++G E + + +EM KG P + S++ L
Sbjct: 317 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376
Query: 471 IEGLYESGNEGEV 483
I G ++ G+
Sbjct: 377 ISGFLKADRFGDA 389
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++A C +++L+ G+V D E++ + R+ + + I L EG + A
Sbjct: 89 TTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL 148
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
E G + + TYN L+ + +S EA ++ M+ GV P+V TY++L+ F K
Sbjct: 149 PVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKR 208
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWN 502
+ + + +L EM G PN S+++ I L ++ E ++++ G +
Sbjct: 209 RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITH 268
Query: 503 FLLTRIVSD 511
+L +++ D
Sbjct: 269 TVLIQVLCD 277
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 203/417 (48%), Gaps = 8/417 (1%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLV--HLMF 172
L T + Y ++ +P L + F ++++ + ++ + NTLLNALV+ N + LV +F
Sbjct: 140 LLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVF 199
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+++ K V PNV T NILI C ++ E A+R++++M G P+ VT+ T+L
Sbjct: 200 QDAV-KLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCK 258
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
R + + + + + G P+ TY +L+ GY KL L +A +V++ M G+ P+ T
Sbjct: 259 RSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWT 318
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y M+ C K EA L D M K VP +ID E + A +L + +
Sbjct: 319 YNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMK 378
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
+ + + +I W C EGKI EA + + E G P TYNT+I G C++ ++
Sbjct: 379 ARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMA 438
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA ++ D+M KG++ + FT N L+ C + + + +G ++ ++ LI
Sbjct: 439 EAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLI 498
Query: 472 EGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIV--SDLDSGAGALDELLVK 525
G ++ K+ +G V + ++N ++ + D L+ELL K
Sbjct: 499 MGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK 555
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 205/444 (46%), Gaps = 38/444 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++ L + V LL ++K N + N + ++ Y + A +
Sbjct: 248 TYNTVLTALCKRSQLTQVRDLLLQMK-NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIEL 306
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V + NT++ L + D + ++ FK+VP+V T N LI +
Sbjct: 307 MTGKGMLPDVWTYNTMVRGLCDEGKIDEA-VRLRDKMESFKLVPDVVTYNTLIDGCFEHR 365
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++++EM + G+ N VTH ++ + G I+ A V +++ G+ PD TY
Sbjct: 366 GSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYN 425
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPN------------------------------ 289
+++GY K G++ +A K+MDEM G++ +
Sbjct: 426 TMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKR 485
Query: 290 -----EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
EVTYG +I + K +++ A L ++M + V + +I LC GK + A
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQA 545
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAG 403
+ LL K +PD + S+ IIH C EG + +A + ++ S+ P + T N L+ G
Sbjct: 546 VDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C L + L++ + KG + TYN++I FCK ++ ++ EM K P+
Sbjct: 606 LCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPD 665
Query: 464 KTSFSLLIEGLYESGNEGEVGKVV 487
+ +++ ++ GL ++G E K+
Sbjct: 666 RYTYNAIVTGLTKAGRTEEAEKLA 689
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 198/422 (46%), Gaps = 44/422 (10%)
Query: 77 NYDTYHSIIH---KLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N +TY+ ++H KL + V L+T P++ + T++R G+ + A
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWT----YNTMVRGLCDEGKIDEA 335
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
V+ ++E F + V + NTL++ +++ D + + + + V N T NI+IK
Sbjct: 336 VRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKAR-GVKENGVTHNIMIK 394
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI------- 246
C + ++ A V+ +M G P+ T+ T++ GY G + A ++ ++
Sbjct: 395 WFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKL 454
Query: 247 -----------------LD-----------RGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
LD RG++ D TY L+ GY K + A+K+
Sbjct: 455 DTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLW 514
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+EM++ G+ +TY +I C K+ +A + L+++L++ VP + +I C E
Sbjct: 515 EEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWE 574
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTY 397
G VE A + +++ + PD + ++ LC+EG + + LF+ + +G +TY
Sbjct: 575 GAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTY 634
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N +I+ C+ L +A L +M K +EP+ +TYN ++ G K G +E ++ + +
Sbjct: 635 NIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAE 694
Query: 458 KG 459
KG
Sbjct: 695 KG 696
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 163/337 (48%), Gaps = 13/337 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y AG+ A K + + ++ +LNTLL+ + K+ D + + +R
Sbjct: 424 YNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKAR 483
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ ++ V T LI K + + A+++ +EM G+V ++T+ TI+ G G
Sbjct: 484 KRGYILDEV-TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKT 542
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A ++L++G VPD +T +++ GY G + A + ++M ++ ++P+ T ++
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ C+ + L + + + + +I C+E ++EDA +L + KN
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG-------SIPSL----LTYNTLIAGM 404
PD + I+ L K G+ EA+KL +F E+G + P L + Y+ I+ +
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
C + +A +L+ +KGV N +TY L+ G K
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 13/249 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++II L + D L EL + + E+ +I Y G E A + +
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP-DESTSNIIIHGYCWEGAVEKAFQFHNK 586
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + +++ + + N LL L + + +F K K + V T NI+I + CK+
Sbjct: 587 MVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTV-TYNIIISSFCKER 645
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-------V 252
+E A ++ EM + P+ T+ I+ G G E A+++ ++G
Sbjct: 646 RLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTS 705
Query: 253 PDATT----YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
P+ T Y+ + G+ DA+K+ + E GV N+ TY +++ K +KS
Sbjct: 706 PELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFT 765
Query: 309 ARNLLDDML 317
+LL M+
Sbjct: 766 TTSLLPFMV 774
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 222/433 (51%), Gaps = 19/433 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG G + +VK F ++E+ V+R+++S + L +++ R+ + F N
Sbjct: 86 MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P N++I VE A R ++M S + P+++T+ T++ GY ++ A
Sbjct: 145 GIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R +
Sbjct: 265 LCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCKTGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRPQSTLHMEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L +++ GV+ + N LI+G + G+ +L+ ML + K+++
Sbjct: 383 GQTAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 468 SLLIEGLYESGNE 480
L++ Y NE
Sbjct: 442 DSLVQS-YLKKNE 453
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 173/343 (50%), Gaps = 2/343 (0%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L L + K Y + K K + PN+ T NILI C + + VL ++ +
Sbjct: 58 ILGYLAKMKHYSTAISLSKQMEVK-GIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKL 116
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G PN +T TT++ G +G+++ + ++ +G+ + +Y L++G K+G A
Sbjct: 117 GYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 176
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+K + +ED+ N V Y +I+ CK K EA + +M R P+ +I
Sbjct: 177 IKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGG 236
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
C G++ A L ++ KN P+ + +I LCKEGK+ EAK L E RG
Sbjct: 237 FCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPAD 296
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TY +L+ G C++ L +A L+ M E G++PN +TY LI G CK G K+ ++ +
Sbjct: 297 VVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQ 356
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++L KGC + +++++I GL + G E + S +G +
Sbjct: 357 DLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCI 399
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 158/311 (50%), Gaps = 8/311 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL--VQNKRYDLVHL-MFKNS 175
T+++ L G + +V ++ Q + S TLLN L + R + L M ++S
Sbjct: 127 TLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDS 186
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
NV N +I LCK V A EM + G+ PN++T+TT++GG+ G
Sbjct: 187 STGL----NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQ 242
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + +++ + P+ TY +L+D K G++ +A ++ EM G + VTY
Sbjct: 243 LTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTS 302
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ FCK + +A L M + P+ +ID LC+ G+++DA +L++ LL K
Sbjct: 303 LLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKG 362
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
C D + +I LCKEG + EA + + E G IP+++T+ +I + + E +A
Sbjct: 363 CCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAE 422
Query: 415 RLWDDMVEKGV 425
+L +M+ KG+
Sbjct: 423 KLLHEMIAKGL 433
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 126/254 (49%), Gaps = 1/254 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A F +L P + ++ K+ + A+ + +ME G+EPN VT +
Sbjct: 33 VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FC + + ++L +L+ Y P++ ++ LC +G+V+ + +++ +
Sbjct: 93 LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAG 414
+ T+++ LCK G+ A K E S +++ YNT+I G+C+ + EA
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ +M +G+ PNV TY LI GFC G +L EM+ K PN ++++LI+ L
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDAL 272
Query: 475 YESGNEGEVGKVVS 488
+ G E +++
Sbjct: 273 CKEGKVKEAKNLLA 286
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++ + + D +L ++K+ I+ + + +I GR + A K F
Sbjct: 299 TYTSLLDGFCKNQNLDKATALFMKMKE-WGIQPNKYTYTALIDGLCKGGRLKDAQKLFQD 357
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + N ++ L + D L K+ +PNV T I+I++L KKD
Sbjct: 358 LLVKGCCIDVCTYNVMIGGLCKEGMLDEA-LAIKSKMEDNGCIPNVVTFEIIIRSLFKKD 416
Query: 200 DVEGAIRVLDEMPSMGMV 217
+ + A ++L EM + G++
Sbjct: 417 ENDKAEKLLHEMIAKGLL 434
>gi|357486821|ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515033|gb|AES96656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 178/330 (53%), Gaps = 4/330 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++R+Y G E A+++F R+ +F ++ NT+L V N++ + L + K
Sbjct: 89 ALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRD-VLNEKLLELALALYTTMLK 147
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V PN +T N+LI CK+ +V+GA +LDEM +G+VP +++ T+IL G +++
Sbjct: 148 SNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDE 207
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++F D+ + + PD + V+++G+ K+GRL +A+ + ++++G N +Y +I
Sbjct: 208 AHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLIN 267
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
AF K ++ EA M ++ VP L +I L +EG+V +A ++ + + + P
Sbjct: 268 AFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTP 327
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
D + +I LC G + A+ L E ++ T+ LI MC+ + EA L++
Sbjct: 328 DAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNV---CTHTILICEMCKRGMVAEAQELFN 384
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
M + G EP+V T+N LI G CK N ++
Sbjct: 385 QMEKLGCEPSVVTFNTLINGLCKANNLEKA 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 188/441 (42%), Gaps = 68/441 (15%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTEL-KQN--PEIKCGENLFITVIRNYGLAGRP 130
FS N ++Y S+I+ +AR + + T++ KQ P++ L+ +IR GR
Sbjct: 255 FSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVV----LYAIMIRGLSKEGRV 310
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP-NVFTCN 189
A K + + + N ++ L V L+ + + ++ NV T
Sbjct: 311 GEAAKMLEEMTQIGLTPDAYCYNAVIQGLCD------VGLLNRAQSLRLEISEHNVCTHT 364
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI--- 246
ILI +CK+ V A + ++M +G P++VT T++ G ++E AK +F +
Sbjct: 365 ILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVG 424
Query: 247 ----------LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
G V D+ + G++ A K++ ++ V+P+ +TY ++
Sbjct: 425 RRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGE-VKPDIITYNIL 483
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPS--SALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+ A C ++ A N + LQ+K PS + +I L + ++A ++++R+ +
Sbjct: 484 LNALCMDREVNAAYNFFE-FLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKT 542
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS--------------------- 393
P ++ T++ LC++ K+ A L+ E + S+PS
Sbjct: 543 GSEPTLSVYRTLMTCLCRKSKVSRAFTLYFEHLK-SLPSRDNDSISALEKYLFGEKLEQV 601
Query: 394 ---------------LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L Y L+ G C++ +++EA + + E ++ N + LI+G
Sbjct: 602 IRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRG 661
Query: 439 FCKIGNAKEGIRILEEMLDKG 459
CK + ++I L+KG
Sbjct: 662 LCKEQRLHDAVKIFLYSLEKG 682
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ + + N LLNAL ++ + + F+ + K P+ T +IK L D + A
Sbjct: 473 VKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEA 532
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+V M G P L + T++ + + A ++ + L D + + L +
Sbjct: 533 FKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDNDSISAL-EK 591
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y+ +L ++ + E++ + Y +++ FC+ K EA +L + + +
Sbjct: 592 YLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKIN 651
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ C +I LC+E ++ DA +++ L K M I + ++ L
Sbjct: 652 ATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCL 697
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 185/364 (50%), Gaps = 2/364 (0%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P R+ +I Q + LA +IF YA PNF HNY TY +I K R++ F ++ LL
Sbjct: 42 PTRVQKLIASQSDPLLAKEIFDYAS-LQPNFRHNYSTYLILILKFGRSKHFSLLDDLLRR 100
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
LK LF +I+ YG A P+ A+ TF + +FN++ + LN +L+ LV ++
Sbjct: 101 LKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHR 160
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
Y HK V P+ + NIL++A C D+ A + ++M +VP++ ++
Sbjct: 161 NYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSY 220
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
++ + + A +F D+L++G+VPD+ TYT L++ + +L +A K++ M+
Sbjct: 221 RILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKV 280
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G P+ V Y +I FC+ ++ +A ++DDM +P+ +++ LC G +++
Sbjct: 281 KGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDE 340
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIA 402
A + + +L K P A+ ++ C G+I EA L E P T+ ++
Sbjct: 341 ATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVP 400
Query: 403 GMCE 406
+CE
Sbjct: 401 QICE 404
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 129/258 (50%), Gaps = 6/258 (2%)
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A + + +GV P+ +Y +++ AFC A L + M +R VP
Sbjct: 163 LRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRI 222
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
++ LC + +V A +L++ +L K +PD+ +T+++ LC++ K+ EA KL + +G
Sbjct: 223 LMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKG 282
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P ++ YNT+I G C +A ++ DDM G PN+ +Y L+ G C +G E
Sbjct: 283 CNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEAT 342
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRI 508
+ +EEML KG P+ L++G G E V++ + D+W ++ +I
Sbjct: 343 KYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQI 402
Query: 509 VSDLDSGA---GALDELL 523
++D G G L+E+L
Sbjct: 403 C-EVDDGVKIDGVLEEVL 419
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ TLLN+L + K+ + + R K K P++ N +I C++ A +V+D
Sbjct: 254 TYTTLLNSLCRKKKLREAYKLL--CRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVID 311
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + G +PNLV++ T++ G G ++ A + ++L +G+ P L+ G+ +G
Sbjct: 312 DMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVG 371
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
R+ +A V+ + ++ P++ T+ +++ C+ + +L+++L+
Sbjct: 372 RIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLK 420
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 175/341 (51%), Gaps = 14/341 (4%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV---FTCNILIKALCKKDDVEG 203
R RSL L RY L LM + H ++ P T N LI+ALC++ D+
Sbjct: 94 RPFRSL------LTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRH 147
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A R L M G P+ T +++ GY +E A +F + RG+ DA +Y L++
Sbjct: 148 AQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIE 207
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ + GR+ +A+++ EM +P+ T+ +++ C + E +L M + + P
Sbjct: 208 GFCEAGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRP 263
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++ ++DL C E K E+A ++ + MP + +++ C+EG++ A ++F
Sbjct: 264 TTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVF 323
Query: 384 DEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+ +G P++ TYN ++ G C + ++ +A L D M E GVEP+V TYN+LI+G C
Sbjct: 324 ESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G+ R+L M G ++ ++++LI+ L ++G E
Sbjct: 384 GHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 199/445 (44%), Gaps = 9/445 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R Q L++A +F FS + +Y ++I A D L E+ Q P++
Sbjct: 176 RTQQLEVAHDLF--CKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ-PDMYT 232
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
L ++ AGR E + ++++ + + R+ L++ + ++ + +
Sbjct: 233 HAAL----VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKIL 288
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N ++P V TC I++ A C++ + GA+RV + M G PN+ T+ I+ G+
Sbjct: 289 -NEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCN 347
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + A + + + G PD TY +L+ G G + A +++ ME NG+ ++ T
Sbjct: 348 AGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYT 407
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y V+I+A CK K EA +L D + R P+S VI+ LC+ GK + AC + ++
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMI 467
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
PD S I LCK E DE + + PS + Y +I +
Sbjct: 468 SAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYG 527
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A R+W MV +G P+V TY ++ +C G E ++ EM + +++ LI
Sbjct: 528 LATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLI 587
Query: 472 EGLYESGNEGEVGKVVSMATASGSV 496
+G G ++ T S+
Sbjct: 588 DGHTSIGQTDRAVTILKHMTGVASM 612
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 174/431 (40%), Gaps = 27/431 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG-ENLFIT---VIRNYGLAGRPEL 132
N TY++I+ A +LL ++++ CG E +T +IR + G
Sbjct: 334 NVWTYNAIVQGFCNAGKVYKAMALLDQMRE-----CGVEPDVVTYNLLIRGQCIDGHIGS 388
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + +E + + N L++AL + + D +F ++ + PN T N +I
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVI 447
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + A L+ M S G P+ T++ + + ++L +
Sbjct: 448 NGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVK 507
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P YT++++ A ++ +M G P+ VTY + A+C + EA N+
Sbjct: 508 PSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENV 567
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN----------AI 362
+ +M + + + + +ID G+ + A + K + MP++
Sbjct: 568 VTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQ 627
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE------RGSIPS-LLTYNTLIAGMCESAELTEAGR 415
H K +W+ +L D FE + S+PS TY +++ G E L E
Sbjct: 628 RRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTS 687
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L M E+ + N YN L+ FCK+ + +L M+ G PN + L+ GL
Sbjct: 688 LVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLT 747
Query: 476 ESGNEGEVGKV 486
G ++
Sbjct: 748 AEGQADRAKEI 758
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 166/396 (41%), Gaps = 18/396 (4%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A F +E ++ + + NT++N L + ++D+ +N P+ +T
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISA-GYAPDTYT 477
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
+ I+ LCK + + +DEM + P+ V +T ++ + A R++G ++
Sbjct: 478 YSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV 537
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+G PD TYT + Y GRL +A V+ EM+ + + Y +I+ ++
Sbjct: 538 SQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTD 597
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED----ACELWK-----------RLL 352
A +L M +P+ ++ L + E A +WK L+
Sbjct: 598 RAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELM 657
Query: 353 RKNCMPDNAISS-TIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAEL 410
+KN +P +A + +I+ +E ++ E L + ++P + YN L+ C+
Sbjct: 658 KKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMY 717
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
++A L M+ G PN+ Y L+ G G A I K ++ + ++
Sbjct: 718 SDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVI 777
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLT 506
I+G G+ ++SM SD +LT
Sbjct: 778 IDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLT 813
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 176/415 (42%), Gaps = 25/415 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I L + D SL L+ I+ F TVI AG+ ++A
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVINGLCKAGKFDVACTFLEN 465
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + L + K L F + + V P+ I+I L +
Sbjct: 466 MISAGYAPDTYTYSPFIENLCKTKGSQ-EGLFFIDEMLQKDVKPSTVNYTIVINRLFNER 524
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A R+ +M S G P++VT+TT + Y G ++ A+ V ++ + DA Y
Sbjct: 525 NYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYN 584
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF----------CKGKKSGEA 309
L+DG+ +G+ AV ++ M PN T+ +++ K +
Sbjct: 585 TLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKT 644
Query: 310 RNLLD-----DMLQRKYVPSSALC-CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
L D +++++ VPSSA +++ EE ++++ L + +N + I
Sbjct: 645 IELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIY 704
Query: 364 STIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +++ CK +A L G +P+L+ Y L++G+ + A ++
Sbjct: 705 NALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRW 764
Query: 423 KGVEPNVFTYNMLIQGFCKIGNA---KEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
K + + ++I GF + G+A + I +LE+M C P+ ++++L E L
Sbjct: 765 KEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQM---KCKPSDETYAMLTEEL 816
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 162/315 (51%), Gaps = 3/315 (0%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ ++ +L + R+ V F+ + PNV I LCK+ V+ A VL+E
Sbjct: 210 TCTVVVRSLCEKGRFKDVSEFFRRML-EMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEE 268
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL-DRGWVPDATTYTVLMDGYIKLG 269
M G+ PN+ THTT++ G G E A R+F ++ + P+ TYTV++ GY + G
Sbjct: 269 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 328
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+L A ++ M + G++PN TY +I CKG A L++ M Q ++P+
Sbjct: 329 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 388
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
VID C++GK+++A ++ + + D + +I CK+G I A LFD E
Sbjct: 389 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 448
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P + Y +LI+ C+ ++ E+ + +D + G+ P TY +I G+CK+G +
Sbjct: 449 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMA 508
Query: 449 IRILEEMLDKGCFPN 463
+R+ E M+ GCF +
Sbjct: 509 LRVFERMVQNGCFAD 523
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 152/310 (49%), Gaps = 2/310 (0%)
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
TC +++++LC+K + M MG PN+V +T + G R ++ A V ++
Sbjct: 210 TCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 269
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKV-MDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ RG P+ T+T L+DG K+G A ++ + ++ + +PN TY VMI +C+ K
Sbjct: 270 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 329
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A LL M+++ P++ +I C+ G + A EL ++ ++ +P+ +
Sbjct: 330 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 389
Query: 366 IIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I CK+GKI EA K+ +G +TY LI C+ +T A L+D MVE G
Sbjct: 390 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 449
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
P++ Y LI +C+ +E + ++ L G P K +++ +I G + G
Sbjct: 450 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMAL 509
Query: 485 KVVSMATASG 494
+V +G
Sbjct: 510 RVFERMVQNG 519
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
V T N +++ + A +V D M G+ P+ + ++ G +E +
Sbjct: 138 VETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLA 197
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ G+ D T TV++ + GR D + M + G PN V Y I+ CK +
Sbjct: 198 AMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRR 257
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+A ++L++M+ R P+ +ID LC+ G E A L+ +L++ + N +
Sbjct: 258 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTY 317
Query: 365 TI-IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T+ I C+EGK+ A+ L E+G P+ TY TLI G C+ A L + M +
Sbjct: 318 TVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQ 377
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+G PN++TYN +I GFCK G +E ++L +G +K ++++LI
Sbjct: 378 EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILI 426
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 163/354 (46%), Gaps = 3/354 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++ +G AGR A L + + V + N +L ++ + +F + +
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVF-DGMTRA 167
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V P+ + L+ C++ VE +L M G + T T ++ +G ++
Sbjct: 168 GVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 227
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
F +L+ G P+ YT +DG K + A V++EM G++PN T+ +I+
Sbjct: 228 SEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 287
Query: 300 FCK-GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
CK G R L + Y P+ +I C EGK+ A L R++ + P
Sbjct: 288 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 347
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +T+I CK G A +L ++ ++ G +P++ TYN +I G C+ ++ EA ++
Sbjct: 348 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 407
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+G++ + TY +LI CK G+ + + + M++ GC P+ +++ LI
Sbjct: 408 RMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLI 461
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 149/319 (46%), Gaps = 3/319 (0%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ A + + A ++ EM S G+ + T +L + G A++VF + G
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD ++ L+ + G++ + ++ M G + T V++ + C+ + +
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
ML+ P+ ID LC+ V+ A + + ++ + P+ +T+I L
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288
Query: 371 CKEGKIWEAKKLFDEFERGSI--PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
CK G A +LF + + S P++ TY +I G C +L A L MVE+G++PN
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
TY LI G CK G+ ++ +M +G PN +++ +I+G + G E KV+
Sbjct: 349 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 408
Query: 489 MATASG-SVESDSWNFLLT 506
MAT+ G + ++ L+T
Sbjct: 409 MATSQGLKFDKITYTILIT 427
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 44/282 (15%)
Query: 148 SVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
+V + TL++ L + + + L + K+S +K PNV T ++I C++ +
Sbjct: 277 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK----PNVHTYTVMIGGYCREGKLAR 332
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A +L M G+ PN T+TT++GG+ G + A + + G++P+ TY ++D
Sbjct: 333 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 392
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ K G++ +A KV+ G++ +++TY ++I CK
Sbjct: 393 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCK--------------------- 431
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+G + A +L+ R++ C PD +++I C++ ++ E++K F
Sbjct: 432 --------------QGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFF 477
Query: 384 DE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
D+ G +P+ TY ++IAG C+ T A R+++ MV+ G
Sbjct: 478 DKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNG 519
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 6/208 (2%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T LI CK + A ++++M G +PN+ T+ ++ G+ +G I+ A +V
Sbjct: 347 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 406
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+G D TYT+L+ + K G +T A+ + D M +NG P+ Y +I +C+
Sbjct: 407 LRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQ 466
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD--- 359
++ E++ D L +P+ +I C+ G+ A +++R+++ C D
Sbjct: 467 QRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSIL 526
Query: 360 ---NAISSTIIHWLCKEGKIWEAKKLFD 384
N + S H E A ++ D
Sbjct: 527 MCSNNVVSATRHSPLHEAHGLGANRMLD 554
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 3/254 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T+ ++I L + + L +L ++ K + + +I Y G+ A
Sbjct: 277 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 336
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+R+ + ++ + + TL+ + +D LM K + F +PN++T N +I
Sbjct: 337 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF--LPNIYTYNAVIDGF 394
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CKK ++ A +VL S G+ + +T+T ++ + +G I A +F +++ G PD
Sbjct: 395 CKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDI 454
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
YT L+ Y + ++ ++ K D+ G+ P + TY MI +CK +S A + +
Sbjct: 455 EAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFER 514
Query: 316 MLQRKYVPSSALCC 329
M+Q S L C
Sbjct: 515 MVQNGCFADSILMC 528
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 219/464 (47%), Gaps = 31/464 (6%)
Query: 38 WPQRLYP---KRLVSMIFRQQNLDLALQ------IFHYAGKFHPNFSHNYDTYHSIIHKL 88
W L P L S I Q L+L+L F + + N H+ + ++IH L
Sbjct: 26 WNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXHSLQSSWTMIHTL 85
Query: 89 ARARAFDAVESLLTELK-----QNPEI-----------KCGENLFITVIRNYGLAGRPEL 132
A+ + F ++LL + +P + + ++ Y + +
Sbjct: 86 AKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQD 145
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A++ F + + + + LLN+L + + ++V ++K + VVPN+ N+LI
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV-RVGVVPNIHIFNVLI 204
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
A CK DVE A ++L+EM S + P+L T+ T++ Y +G A + D ++RG V
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI-QDRMERGGV 263
Query: 253 -PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY L+ G+ + GR+ +A+++ E+ NG PN VTY +I+ +C+ EA
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L + M P ++ LCEEGK++DA L + + PDN +T+I+ C
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 372 KEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G + A K+ + E G P T+ LI G C+ E+ A +M++ G P+
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
TY+ L+ + N + IR+ +E+ KG F + + + LI L
Sbjct: 442 TYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRL 485
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 4/268 (1%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV-KVMDEMEDNGVEPNEVTYGV 295
++A +VF + G+ P TVL++ K RLT+ V KV +M GV PN + V
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAK-ARLTNMVWKVYKKMVRVGVVPNIHIFNV 202
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I A CK +A LL++M R P +I L C++G +A + R+ R
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD +++I+ C+EG++ EA +LF E G+ P+ +TY TLI G C +L EA R
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN-GATPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L + M +G+ P V TYN +++ C+ G K+ R+L EM ++ P+ + + LI
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNF 503
+ G+ G KV +G ++ D + F
Sbjct: 382 KIGDMGSAMKVKKKMLEAG-LKPDQFTF 408
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 162/348 (46%), Gaps = 11/348 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N ++ +IH ++ + E LL E++ P++ + T+I Y G A
Sbjct: 196 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT----YNTLISLYCKKGMHYEA 251
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R+E+ V + + N+L+ + R +F R PN T LI
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF---REINGATPNHVTYTTLID 308
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ +D+E A+R+ + M G+ P +VT+ +IL G I++A R+ ++ +R P
Sbjct: 309 GYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEP 368
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T L++ Y K+G + A+KV +M + G++P++ T+ +I FCK + A+ L
Sbjct: 369 DNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFL 428
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ML + PS + ++D ++ E L L RK D ++ +I LCK
Sbjct: 429 FEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKI 488
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
KI A+++F + +G + Y +L ++ + A + D+M
Sbjct: 489 DKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 4/252 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P V T N +++ LC++ ++ A R+L+EM + P+ VT T++ Y GD+ +A +V
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L+ G PD T+ L+ G+ KL + A + + EM D G P+ TY +++++
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
L D++ ++ ++ +I LC+ K+E A ++ + K D+ +
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++ + K GK A + DE + R + +L Y A + G WD ++
Sbjct: 513 YTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSIL--GLFWDHVI 570
Query: 422 EKG-VEPNVFTY 432
E+ + N+ Y
Sbjct: 571 ERRLISKNILKY 582
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 208/432 (48%), Gaps = 35/432 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+I L +A + L + QN ++ C + T+I YG+AG+ E A R
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA-YAYNTMIMGYGMAGKFEDAYSLLER 365
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----------------------LVHLMFKNSRH 177
+ SV S N +L+ L + + D ++ ++ K +
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL 425
Query: 178 KFKVV-----------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ +V PNV T NI++ LCK ++ A + + + P+ VT+ ++
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL 485
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G G ++ A +++ +LD +P+A YT L+ + K GR D K+ +EM G
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ + ++ K + + R L ++ ++P + +I L + G +A E
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
L+ + + C+ D +T+I CK GK+ +A +L +E + +G P+++TY ++I G+
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLA 665
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ L EA L+++ KG+E NV Y+ LI GF K+G E I+EE++ KG PN
Sbjct: 666 KIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 725
Query: 466 SFSLLIEGLYES 477
+++ L++ L ++
Sbjct: 726 TWNCLLDALVKA 737
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 38/443 (8%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+ ++ ++ R ++++ A+ F +A + + +H + Y+S++ +AR R F+ +E +L E
Sbjct: 97 PELVIGVLRRLKDVNNAVNYFRWAERL-TDRAHCREAYNSLLMVMARTRKFNCLEQILEE 155
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ I +G + + + + F R +R T + +
Sbjct: 156 MS---------------IAGFGPSNNTCIEI-----VLSFIKSRKLREAFTFIQTM---- 191
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
K K P LI AL D + + + +M +G N+
Sbjct: 192 -------------RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
TT++ + G ++ A + ++ PD Y V +D + K G++ A K EM+
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKA 298
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
NG+ ++VTY MI CK + EA L + M Q K VP + +I GK ED
Sbjct: 299 NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFED 358
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG 403
A L +R RK C+P + I+ L ++G++ EA K F+E ++ +IP+L TYN +I
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDM 418
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C++ +L A + D M + G+ PNV T N+++ CK + I E + K C P+
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478
Query: 464 KTSFSLLIEGLYESGNEGEVGKV 486
++ LIEGL G E K+
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKL 501
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 213/467 (45%), Gaps = 7/467 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + +V + + Q LD A IF G H + TY S+I L R D
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFE--GLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
L ++ +I ++ ++IRN+ GR E K + + + + LNT ++
Sbjct: 499 YKLYEQMLDANQIP-NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMD 557
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ + + +F+ ++ +P+ + ILI L K A + M G V
Sbjct: 558 CVFKAGEIEKGRALFQEIKN-LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+ + T++ G+ G + A ++ ++ +G P TY ++DG K+ RL +A +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+E + G+E N V Y +I+ F K + EA ++++++Q+ P+ ++D L +
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
++ +A ++ + C P+ S +IH LCK K +A + E ++ G P++ T
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y T+I+G+ ++ + EA L++ EKG + YN +I+G A + R+ EE
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Query: 457 DKGCFPNKTSFSLLIEGLY--ESGNEGEVGKVVSMATASGSVESDSW 501
KGC + +L++ L+ E + + V TA + SW
Sbjct: 857 LKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSW 903
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 228/486 (46%), Gaps = 11/486 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFH-PNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
++S + R+ +D AL+ F K PN S TY+ +I L +A + + +K
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAIPNLS----TYNIMIDMLCKAGKLETALVVRDAMK 436
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
+ I V R A R + A F ++ + + +L+ L ++ R
Sbjct: 437 DAGLFPNVITVNIMVDR-LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
D + +++ ++ PN LI+ K E ++ +EM +G P+L+ T
Sbjct: 496 DEAYKLYEQMLDANQI-PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+ G+IE + +F +I + G++PDA +YT+L+ G +K G +A ++ M++ G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ Y +I+ FCK K +A LL++M + + P+ VID L + ++++A
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
L++ K + I S++I K G+I EA + +E ++G P++ T+N L+ +
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
++ E++EA + M + PN TY++LI G CKI + +EM +G PN
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGA---LDE 521
+++ +I GL ++GN E + G V + + +S+ + + A +E
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854
Query: 522 LLVKNC 527
+K C
Sbjct: 855 ARLKGC 860
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 12/296 (4%)
Query: 235 DIENAKRVF---GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
D+ NA F + DR +A Y L+ + + ++++EM G P+
Sbjct: 109 DVNNAVNYFRWAERLTDRAHCREA--YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNN 166
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T ++ +F K +K EA + M + K+ P+ + +I L + L++++
Sbjct: 167 TCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM 226
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAEL 410
+ + +T+I +EG++ A L DE + S+ P ++ YN I ++ ++
Sbjct: 227 QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKV 286
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A + + +M G+ + TY +I CK E + + E M P +++ +
Sbjct: 287 DMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM 346
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSDLDSGAGALDELLVK 525
I G +G + ++ G + S S+N +L+ + G +DE L K
Sbjct: 347 IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL-----GRKGQVDEALKK 397
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 208/432 (48%), Gaps = 35/432 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+I L +A + L + QN ++ C + T+I YG+AG+ E A R
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA-YAYNTMIMGYGMAGKFEDAYSLLER 365
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----------------------LVHLMFKNSRH 177
+ SV S N +L+ L + + D ++ ++ K +
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL 425
Query: 178 KFKVV-----------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ +V PNV T NI++ LCK ++ A + + + P+ VT+ ++
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL 485
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ G G ++ A +++ +LD +P+A YT L+ + K GR D K+ +EM G
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ + ++ K + + R L ++ ++P + +I L + G +A E
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
L+ + + C+ D +T+I CK GK+ +A +L +E + +G P+++TY ++I G+
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLA 665
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ L EA L+++ KG+E NV Y+ LI GF K+G E I+EE++ KG PN
Sbjct: 666 KIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 725
Query: 466 SFSLLIEGLYES 477
+++ L++ L ++
Sbjct: 726 TWNCLLDALVKA 737
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 38/443 (8%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+ ++ ++ R ++++ A+ F +A + + +H + Y+S++ +AR R F+ +E +L E
Sbjct: 97 PELVIGVLRRLKDVNNAVNYFRWAERL-TDRAHCREAYNSLLMVMARTRKFNCLEQILEE 155
Query: 104 LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+ I +G + + + + F R +R T + +
Sbjct: 156 MS---------------IAGFGPSNNTCIEI-----VLSFIKSRKLREAFTFIQTM---- 191
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
K K P LI AL D + + + +M +G N+
Sbjct: 192 -------------RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
TT++ + G ++ A + ++ PD Y V +D + K G++ A K EM+
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKA 298
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
NG+ ++VTY MI CK + EA L + M Q K VP + +I GK ED
Sbjct: 299 NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFED 358
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAG 403
A L +R RK C+P + I+ L ++G++ EA K F+E ++ +IP+L TYN +I
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDM 418
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+C++ +L A + D M + G+ PNV T N+++ CK + I E + K C P+
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478
Query: 464 KTSFSLLIEGLYESGNEGEVGKV 486
++ LIEGL G E K+
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKL 501
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 213/467 (45%), Gaps = 7/467 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + +V + + Q LD A IF G H + TY S+I L R D
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFE--GLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
L ++ +I ++ ++IRN+ GR E K + + + + LNT ++
Sbjct: 499 YKLYEQMLDANQIP-NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMD 557
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+ + + +F+ ++ +P+ + ILI L K A + M G V
Sbjct: 558 CVFKAGEIEKGRALFQEIKN-LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
+ + T++ G+ G + A ++ ++ +G P TY ++DG K+ RL +A +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+E + G+E N V Y +I+ F K + EA ++++++Q+ P+ ++D L +
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
++ +A ++ + C P+ S +IH LCK K +A + E ++ G P++ T
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y T+I+G+ ++ + EA L++ EKG + YN +I+G A + R+ EE
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Query: 457 DKGCFPNKTSFSLLIEGLY--ESGNEGEVGKVVSMATASGSVESDSW 501
KGC + +L++ L+ E + + V TA + SW
Sbjct: 857 LKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSW 903
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 228/486 (46%), Gaps = 11/486 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFH-PNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
++S + R+ +D AL+ F K PN S TY+ +I L +A + + +K
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAIPNLS----TYNIMIDMLCKAGKLETALVVRDAMK 436
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
+ I V R A R + A F ++ + + +L+ L ++ R
Sbjct: 437 DAGLFPNVITVNIMVDR-LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
D + +++ ++ PN LI+ K E ++ +EM +G P+L+ T
Sbjct: 496 DEAYKLYEQMLDANQI-PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+ G+IE + +F +I + G++PDA +YT+L+ G +K G +A ++ M++ G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ Y +I+ FCK K +A LL++M + + P+ VID L + ++++A
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
L++ K + I S++I K G+I EA + +E ++G P++ T+N L+ +
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
++ E++EA + M + PN TY++LI G CKI + +EM +G PN
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGA---LDE 521
+++ +I GL ++GN E + G V + + +S+ + + A +E
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854
Query: 522 LLVKNC 527
+K C
Sbjct: 855 ARLKGC 860
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 12/296 (4%)
Query: 235 DIENAKRVF---GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
D+ NA F + DR +A Y L+ + + ++++EM G P+
Sbjct: 109 DVNNAVNYFRWAERLTDRAHCREA--YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNN 166
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
T ++ +F K +K EA + M + K+ P+ + +I L + L++++
Sbjct: 167 TCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM 226
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAEL 410
+ + +T+I +EG++ A L DE + S+ P ++ YN I ++ ++
Sbjct: 227 QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKV 286
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A + + +M G+ + TY +I CK E + + E M P +++ +
Sbjct: 287 DMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM 346
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSDLDSGAGALDELLVK 525
I G +G + ++ G + S S+N +L+ + G +DE L K
Sbjct: 347 IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL-----GRKGQVDEALKK 397
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 197/423 (46%), Gaps = 23/423 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN--PEIKCGENLFITVIRNYGLAGRPEL-- 132
N ++S++H + + LL + P N+FI I P+L
Sbjct: 345 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 404
Query: 133 -AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A K + + N + ++ L ++D + K K VP+ T + +
Sbjct: 405 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKV 463
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I LC VE A + EM +G+ P++ T+T ++ + G IE A+ +F ++ G
Sbjct: 464 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 523
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P TYT L+ Y+K ++ A + M D G PN+VTYG +++ CK +A
Sbjct: 524 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 583
Query: 312 LLDDML----------------QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+ ++ + P+ ++D LC+ KV+ A EL +L
Sbjct: 584 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 643
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
C P++ + +I CK GKI A+++F + + G +PS+ TY +LI M + L A
Sbjct: 644 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 703
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ M++ PNV TY +I G C+IG +++ +++L M +KGC PN +++ LI+GL
Sbjct: 704 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Query: 475 YES 477
+S
Sbjct: 764 GQS 766
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 132/600 (22%), Positives = 223/600 (37%), Gaps = 135/600 (22%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA-RARAFDAVESLLTELKQNPEIKCGENL 116
+L + F +A + +SH Y ++ L RA DA E LL E+ + G L
Sbjct: 120 ELCARFFLWAER-QVGYSHTGACYDALADALGFDGRARDA-ERLLREIGEEDREVLGR-L 176
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL--------- 167
++R G A++ R++ F + S + N L+ L + DL
Sbjct: 177 LNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 236
Query: 168 --------------VHLMFKNSR----------HKFKVVPNVFTCNILIKALCKKDDVEG 203
H + K R FK+ + C +I L + +
Sbjct: 237 ESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKL--DTVLCTHMISGLMEASYFDE 294
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A+ L M +PN+VT+ T+L G++ + + KR+ ++ G P+ + + L+
Sbjct: 295 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 354
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK-------------SGE-- 308
Y A K+++ M G P V Y + I + C +K GE
Sbjct: 355 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 414
Query: 309 --------------------------ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
A L+ +M+++ +VP ++ KVI LC KVE
Sbjct: 415 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE 474
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLI 401
A L++ + PD + +I CK G I +A+ LF+E G P+++TY LI
Sbjct: 475 KAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 534
Query: 402 AGMCESAELTEAGRLWDDMVEKG------------------------------------- 424
++ ++ +A ++ MV+ G
Sbjct: 535 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 594
Query: 425 --------------VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ PNV TY L+ G CK +L+ ML GC PN + L
Sbjct: 595 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 654
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
I+G ++G +V T G + S ++ L+ R+ D LD L ++L +C
Sbjct: 655 IDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 714
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 219/464 (47%), Gaps = 31/464 (6%)
Query: 38 WPQRLYP---KRLVSMIFRQQNLDLALQ------IFHYAGKFHPNFSHNYDTYHSIIHKL 88
W L P L S I Q L+L+L F + + N H+ + ++IH L
Sbjct: 26 WNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTL 85
Query: 89 ARARAFDAVESLLTELK-----QNPEI-----------KCGENLFITVIRNYGLAGRPEL 132
A+ + F ++LL + +P + + ++ Y + +
Sbjct: 86 AKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQD 145
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A++ F + + + + LLN+L + + ++V ++K + VVPN+ N+LI
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV-RVGVVPNIHIFNVLI 204
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
A CK DVE A ++L+EM S + P+L T+ T++ Y +G A + D ++RG V
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI-QDRMERGGV 263
Query: 253 -PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY L+ G+ + GR+ +A+++ E+ NG PN VTY +I+ +C+ EA
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L + M P ++ LCEEGK++DA L + + PDN +T+I+ C
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 372 KEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G + A K+ + E G P T+ LI G C+ E+ A +M++ G P+
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
TY+ L+ + N + IR+ +E+ KG F + + + LI L
Sbjct: 442 TYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRL 485
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 4/268 (1%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV-KVMDEMEDNGVEPNEVTYGV 295
++A +VF + G+ P TVL++ K RLT+ V KV +M GV PN + V
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAK-ARLTNMVWKVYKKMVRVGVVPNIHIFNV 202
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I A CK +A LL++M R P +I L C++G +A + R+ R
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD +++I+ C+EG++ EA +LF E G+ P+ +TY TLI G C +L EA R
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN-GATPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L + M +G+ P V TYN +++ C+ G K+ R+L EM ++ P+ + + LI
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 476 ESGNEGEVGKVVSMATASGSVESDSWNF 503
+ G+ G KV +G ++ D + F
Sbjct: 382 KIGDMGSAMKVKKKMLEAG-LKPDQFTF 408
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 162/348 (46%), Gaps = 11/348 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N ++ +IH ++ + E LL E++ P++ + T+I Y G A
Sbjct: 196 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT----YNTLISLYCKKGMHYEA 251
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ R+E+ V + + N+L+ + R +F R PN T LI
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF---REINGATPNHVTYTTLID 308
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ +D+E A+R+ + M G+ P +VT+ +IL G I++A R+ ++ +R P
Sbjct: 309 GYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEP 368
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T L++ Y K+G + A+KV +M + G++P++ T+ +I FCK + A+ L
Sbjct: 369 DNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFL 428
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ML + PS + ++D ++ E L L RK D ++ +I LCK
Sbjct: 429 FEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKI 488
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
KI A+++F + +G + Y +L ++ + A + D+M
Sbjct: 489 DKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 4/252 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P V T N +++ LC++ ++ A R+L+EM + P+ VT T++ Y GD+ +A +V
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L+ G PD T+ L+ G+ KL + A + + EM D G P+ TY +++++
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
L D++ ++ ++ +I LC+ K+E A ++ + K D+ +
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++ + K GK A + DE + R + +L Y A + G WD ++
Sbjct: 513 YTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSIL--GLFWDHVI 570
Query: 422 EKG-VEPNVFTY 432
E+ + N+ Y
Sbjct: 571 ERRLISKNILKY 582
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 207/404 (51%), Gaps = 14/404 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY+ I L + + E +L E L I G LF +V+ GL R +++ +
Sbjct: 373 TYNLIARALCKEGEMERAERILEEMLSTGMTIHSG--LFNSVV--AGLLQRTG-RLESVV 427
Query: 139 RIEKFNVQRSVRSLNTLLNA----LVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIK 193
R+ V+R ++ + L+ A L Q +R+ + V + K + N+ T N LI
Sbjct: 428 RLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI--NIATSNALIH 485
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC+ +++GA VL M + GM + +T+ ++ G IE A ++ D++ +G+ P
Sbjct: 486 GLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKP 545
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
DA + ++ Y LG++ +A+ ++ +M+ GV+P+ V+YG +I+ +CK K +A L
Sbjct: 546 DAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYL 605
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++++ P++ + +I G + A + + P N +++HW+C
Sbjct: 606 NELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHA 665
Query: 374 GKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G + EAK +F++ + SI ++ Y +I G+C+ ++ EA +++M + + PN TY
Sbjct: 666 GLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITY 725
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
L+ +CK GN +E ++ +EM+ G P+ S++ L+ G +
Sbjct: 726 TTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQ 769
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/612 (23%), Positives = 247/612 (40%), Gaps = 113/612 (18%)
Query: 13 SCLLQSIGGA-RCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH 71
+C+ S G+ R ++ V + P L+ + R NL ++F
Sbjct: 164 TCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCK 223
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENLFITVIRNYGLAGRP 130
+ Y +Y S+I L + D +L++L + G + ++ +GR
Sbjct: 224 TVTPNGY-SYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRV 282
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A++ R+E+ V S+ + L+N L ++ R+ V + + + PN CN
Sbjct: 283 DEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLRE-MEGLGITPNEVICNE 341
Query: 191 LI-----------------------------------KALCKKDDVEGAIRVLDEMPSMG 215
LI +ALCK+ ++E A R+L+EM S G
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401
Query: 216 MVPNLVTHTTILGGYVWR-GDIENAKRVFGDILDRGWVPD-------------------- 254
M + +++ G + R G +E+ R+ +++ RG P+
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461
Query: 255 ---------------ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
T L+ G + + A +V+ M + G+E + +TY +MI+
Sbjct: 462 VGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQG 521
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK K EA L DDM+++ + P + + +I C+ GK+E+A L ++ + PD
Sbjct: 522 CCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPD 581
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG--------------- 403
TII CK I +A + +E G P+ + YN LI G
Sbjct: 582 VVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLD 641
Query: 404 --------------------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
MC + + EA +++ + +E V Y ++IQG CKIG
Sbjct: 642 TMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIG 701
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-SWN 502
E + EEM + PNK +++ L+ +SGN E K+ +SG V + S+N
Sbjct: 702 KMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYN 761
Query: 503 FLLTRIVSDLDS 514
L+T S +DS
Sbjct: 762 TLVTGF-SQVDS 772
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 173/403 (42%), Gaps = 39/403 (9%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+L I G LAV F + SV++ N LL AL + +F
Sbjct: 159 DLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDE 218
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM--VPNLVTHTTILGGYVW 232
R V PN ++ +IKALCK V+ ++L ++ G+ V + ++
Sbjct: 219 MRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCK 278
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE-- 290
G ++ A R+ G + + P T+ +L++G + R + ++ EME G+ PNE
Sbjct: 279 SGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVI 338
Query: 291 ---------------------------------VTYGVMIEAFCKGKKSGEARNLLDDML 317
VTY ++ A CK + A +L++ML
Sbjct: 339 CNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEML 398
Query: 318 QRKYVPSSALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
S L V+ LL G++E L ++++ P++A+ + LC+ +
Sbjct: 399 STGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRH 458
Query: 377 WEAKKL-FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA + E+G ++ T N LI G+CE + A + MV KG+E + TYN++
Sbjct: 459 QEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIM 518
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
IQG CK +E +++ ++M+ KG P+ F+ +I + G
Sbjct: 519 IQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLG 561
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
PSS L G + A + + L + P + ++ L + G + K
Sbjct: 155 TPSSDLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCK 214
Query: 382 LFDEFE--RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN--VFTYNMLIQ 437
+FDE + P+ +Y ++I +C+ ++ + ++ D++ G++ + YN+L+
Sbjct: 215 VFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMD 274
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
CK G E IR+ M + P+ +F +LI GL S GEVG ++
Sbjct: 275 ALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALL 324
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 186/381 (48%), Gaps = 10/381 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKN 174
T+I G+ A++ R++ VQ +V NT+++++ + N+ +DL M
Sbjct: 182 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 241
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P+V T N LI C ++ A + ++M + PN+ T ++ G+
Sbjct: 242 G-----ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKER 296
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ AK V ++ +G PD TY LMD Y + + A + + + GV PN +Y
Sbjct: 297 RLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYS 356
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+MI FCK KK EA NL +M +P +ID LC+ GK+ A +L + +
Sbjct: 357 IMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR 416
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
D ++I+ LCK ++ +A L + + G P + TY TL+ G+C++ L +A
Sbjct: 417 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDA 476
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+++D++ KG +V Y +IQGFC G E + +L +M + GC PN ++ ++I
Sbjct: 477 RIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICS 536
Query: 474 LYESGNEGEVGKVVSMATASG 494
L++ + K++ G
Sbjct: 537 LFDKDENDKAEKLLREMITRG 557
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 197/379 (51%), Gaps = 2/379 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I+ L G+ A++ ++ + S TL+N L + + + + K
Sbjct: 147 TLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGK 206
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V PNV N +I ++CK V A + EM S G+ P++VT+ ++ G+ G +++
Sbjct: 207 L-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKD 265
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F ++ P+ T+ +L+DG+ K RL +A V+ M G++P+ TY +++
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C K+ +A+++ + + QR P+ +I C+ KV++A L+K + N +P
Sbjct: 326 RYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP 385
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I LCK GKI A KL DE +RG +TYN+++ +C++ ++ +A L
Sbjct: 386 DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 445
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M ++G++P++ TY L+ G CK G ++ + E++L KG + ++ +I+G
Sbjct: 446 TKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSH 505
Query: 478 GNEGEVGKVVSMATASGSV 496
G E ++S +G +
Sbjct: 506 GLFDESLDLLSKMEENGCI 524
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 186/356 (52%), Gaps = 3/356 (0%)
Query: 134 VKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
V +F R+ + N + S+ +L +LV++ Y V + + + ++ +ILI
Sbjct: 56 VSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFN-GITSDLVILSILI 114
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ + VL ++ MG PN++T TT++ G +G I A + ++ G+
Sbjct: 115 NCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFH 174
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
+ +Y L++G K+G+ + A++++ ++ V+PN V Y +I++ CK K EA +L
Sbjct: 175 LNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 234
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+M+ + P +I C GK++DA +L+ +++ +N P+ + ++ CK
Sbjct: 235 YSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK 294
Query: 373 EGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
E ++ EAK + ++G P + TYN+L+ C E+ +A +++ + ++GV PN+ +
Sbjct: 295 ERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHS 354
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
Y+++I GFCKI E + + +EM P+ +++ LI+GL + G K+V
Sbjct: 355 YSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 142/280 (50%), Gaps = 1/280 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV+T NIL+ CK+ ++ A VL M G+ P++ T+ +++ Y ++ AK +
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHI 339
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F I RG P+ +Y++++ G+ K+ ++ +A+ + EM N + P+ VTY +I+ CK
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCK 399
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K A L+D+M R ++D LC+ +V+ A L ++ + PD
Sbjct: 400 LGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICT 459
Query: 363 SSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T++ LCK G++ +A+ +F D +G I + Y +I G C E+ L M
Sbjct: 460 YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
E G PN TY ++I + ++L EM+ +G F
Sbjct: 520 ENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 131/258 (50%), Gaps = 4/258 (1%)
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P + ++ +K + V + +ME NG+ + V ++I F + ++ + ++
Sbjct: 70 PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +L+ Y P+ +I LC +G++ A + +++ + T+I+ LCK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G+ A +L + + P+++ YNT+I MC+ + EA L+ +MV KG+ P+V T
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
YN LI GFC +G K+ + +M+ + PN +F++L++G + E V++M
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309
Query: 492 ASGSVESD--SWNFLLTR 507
G ++ D ++N L+ R
Sbjct: 310 KQG-IKPDVFTYNSLMDR 326
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 206/442 (46%), Gaps = 40/442 (9%)
Query: 92 RAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
RA +A+E LL + + C N+ + TVI + G+ + FL + + V
Sbjct: 180 RAEEALE-LLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDV 238
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ T+++ L + + +D +F+ V PN+ T N LI + +R+L+
Sbjct: 239 VTYTTVIDGLCKAQLFDRAEAVFQQMIDN-GVKPNIDTYNCLIHGYLSIGKWKEVVRMLE 297
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
EM + G PN T+ ++L G A+ F ++ +G P TTY +++ GY G
Sbjct: 298 EMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKG 357
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
L++ +++ M NG+ PN + + A+ K +A ++ + M Q+ P +
Sbjct: 358 ALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYG 417
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH-------W------------- 369
+ID LC+ G+V+DA + +++ + PD + S++++ W
Sbjct: 418 ALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV 477
Query: 370 ---------------LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
LCKEG++ E ++L D E G P +++YNTLI G C + + EA
Sbjct: 478 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEA 537
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+L + MV G++P+ F+YN L+ G+CK G +ML G P +++ ++ G
Sbjct: 538 SKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG 597
Query: 474 LYESGNEGEVGKVVSMATASGS 495
L+++ E ++ SG+
Sbjct: 598 LFQTKRFSEAKELYLNMINSGT 619
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 221/480 (46%), Gaps = 43/480 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y+++I A D LL E + +K + T++ Y AGR + A F +
Sbjct: 520 SYNTLIDGHCLAGTIDEASKLL-EGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRK 578
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDL---VHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + V + NT+L+ L Q KR+ ++L NS K+ +++T NI++ LC
Sbjct: 579 MLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW----DIYTYNIILNGLC 634
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K + V+ AI++ + S G+ N++T ++G + G E+A +F I G V +
Sbjct: 635 KSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVV 694
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY ++++ I+ G L + + ME NG PN ++ A L +
Sbjct: 695 TYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 754
Query: 317 LQRKYVPSSALCCKVIDLLCEEG----------------------------KVEDACELW 348
+R + ++ +I + + +++DA L+
Sbjct: 755 DERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLF 814
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCES 407
+ +L K PD +TI+H L + G+ EAK+L+ + ++ TYN ++ G+C+S
Sbjct: 815 REMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKS 874
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ EA +++ + KG++ N+ T+N++I K G ++ + + + G P+ ++
Sbjct: 875 NCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTY 934
Query: 468 SLLIEGLYESGNEGEV-GKVVSMATASGSVESDSWNFLLTRIVSDLD-SGAGA----LDE 521
L+ E L E G+ E G ++M + ++S N L+ R++ D S AGA LDE
Sbjct: 935 RLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDE 994
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 210/488 (43%), Gaps = 77/488 (15%)
Query: 95 DAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+ V SL + ++ IK N + +I + G E F I K + +
Sbjct: 73 ETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVI 132
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N LLN L KR + + +P+ + NIL+K LC + E A+ +L M
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192
Query: 213 S---MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD------ 263
PN+V+++T++ G+ G ++ +F +++DRG PD TYT ++D
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ 252
Query: 264 -----------------------------GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
GY+ +G+ + V++++EM G +PN TYG
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYG 312
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-------------SALCCKVIDLL------ 335
++ CK + EAR D M+ + PS ++ DLL
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372
Query: 336 ----------------CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ G ++ A +++ ++ ++ PD +I LCK G++ +A
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ F++ G P ++ +++L+ G+C + + L+ +M+ G+ PN+ +N ++
Sbjct: 433 EVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 492
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVE 497
CK G EG R+++ + G P+ S++ LI+G +G E K++ M + +
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552
Query: 498 SDSWNFLL 505
S S+N LL
Sbjct: 553 SFSYNTLL 560
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 228/518 (44%), Gaps = 77/518 (14%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I L +A+ FD E++ ++ N +K + + +I Y G+ + V+
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNG-VKPNIDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKR----------------------------------- 164
+ + + + +LLN L +N R
Sbjct: 299 MSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGA 358
Query: 165 ----YDLVHLMFKN----SRHKFKVV--------------------------PNVFTCNI 190
+DL++LM N + H F + P+ +
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI ALCK V+ A ++M + G+ P++V ++++ G E + +F ++L+ G
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ + ++ K GR+ + +++D +E GV P+ ++Y +I+ C EA
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 538
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL+ M+ P S ++ C+ G+++ A ++++L P +TI+H L
Sbjct: 539 KLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGL 598
Query: 371 CKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+ + EAK+L+ + G+ + TYN ++ G+C+S + EA +++ ++ KG++ N+
Sbjct: 599 FQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNI 658
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
T+N++I K G ++ + + + G N ++ L++E L E G+ E + S
Sbjct: 659 ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSA 718
Query: 490 ATASGSV-ESDSWNFLLTRIVSDLD-SGAGA----LDE 521
+G+ S N L+ R++ D S AGA LDE
Sbjct: 719 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 756
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 17/308 (5%)
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL--- 132
N TY ++ L + + +SL + +++N + L V R L R ++
Sbjct: 691 QNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR---LLHRGDISRA 747
Query: 133 -AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A + L F+V+ S S+ L+ D K+ K++++ N + L
Sbjct: 748 GAYLSKLDERNFSVEASTTSM------LISIFSSDEYQHHAKSLPKKYRIL-NEANSSAL 800
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
IK + DD R EM G+ P++VT+ TIL G G AK ++ +++
Sbjct: 801 IKKARRIDDAYSLFR---EMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 857
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
+ TY ++++G K + +A K+ + G++ N +T+ +MI A KG + +A +
Sbjct: 858 QMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 917
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L + VP V + L EEG +E+ L+ + + D+ + + ++ L
Sbjct: 918 LFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLL 977
Query: 372 KEGKIWEA 379
+ G I A
Sbjct: 978 QRGDISRA 985
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 88 LARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
+ +AR D SL E+ P++ + T++ GR A + +L +
Sbjct: 801 IKKARRIDDAYSLFREMLMKGLTPDVVT----YNTILHGLFQTGRFSEAKELYLSMINSR 856
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
Q ++ + N +LN L ++ D MF++ K + N+ T NI+I AL K E A
Sbjct: 857 TQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK-GLQLNIITFNIMIGALLKGGRKEDA 915
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ + +P+ G+VP++VT+ + + G +E +F + G D+ L+
Sbjct: 916 MDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRR 975
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
++ G ++ A + ++++ T +I F +G+ A++L
Sbjct: 976 LLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSL 1023
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 3/374 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG + A + F + + N LLN L+ + R +F++ P+V+
Sbjct: 24 AGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVW 83
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
+ N++IK +C+ +++ A+ +++ M G P+ +T ++ G + V +
Sbjct: 84 SFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRL 143
Query: 247 LDRG-WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
G +P+ TYT ++ GY K GR+ DA V ++M +G PN VTY V+I + K
Sbjct: 144 QRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALD 203
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
A + ++ P +ID C G+++DA +W + + + P+ S
Sbjct: 204 MESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSI 263
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
IIH LC + + EA L E + +P YN +I +C+ ++ EA + DM EK
Sbjct: 264 IIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEK 323
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G P+ +TY +LI G C G E + + +M++ GC P+ + + I + ++G EV
Sbjct: 324 GCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAGMPNEV 383
Query: 484 GKVVSMATASGSVE 497
+++ +A+ S
Sbjct: 384 HQIMLIASGHASAS 397
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 171/329 (51%), Gaps = 10/329 (3%)
Query: 80 TYHSIIHKL-ARARAFDAV---ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
Y+++++ L A RA DAV ES + + +P++ F VI+ G + A++
Sbjct: 48 AYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWS----FNVVIKGVCRVGNLQKALE 103
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
R+ +F + N L++ L + K+ + H + + + +PNV T +I
Sbjct: 104 LVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGY 163
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++ A V ++M G PN VT+ ++ GY D+E+A R++ ++ PD
Sbjct: 164 CKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDV 223
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+ L+DGY + G+L DA+++ EM + ++PN T+ ++I + C +S EA +LL +
Sbjct: 224 VTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRE 283
Query: 316 MLQRK-YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ R VP + + +ID+LC+ GKV++A + + K C PD + +I C +G
Sbjct: 284 LNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKG 343
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+I EA LF + E G P +T N+ I+
Sbjct: 344 RIPEAVTLFHKMVETGCRPDNITINSFIS 372
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 143/338 (42%), Gaps = 39/338 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
++ + R NL AL++ +F S + T + ++ L R + + +L L++
Sbjct: 88 VIKGVCRVGNLQKALELVERMTEF--GCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQR 145
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + +VI Y AGR + A + N +L + +
Sbjct: 146 DGVCMPNVVTYTSVISGYCKAGRMKDAFSVY---------------NDMLQSGTR----- 185
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
PN T N+LI K D+E A+R+ ++ P++VT ++
Sbjct: 186 ----------------PNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSL 229
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG- 285
+ GY G +++A R++ ++ P+ T+++++ R +A+ ++ E+
Sbjct: 230 IDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRAD 289
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P Y +I+ CKG K EA ++ DM ++ P +I C +G++ +A
Sbjct: 290 IVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAV 349
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
L+ +++ C PDN ++ I + K G E ++
Sbjct: 350 TLFHKMVETGCRPDNITINSFISCVLKAGMPNEVHQIM 387
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 212/440 (48%), Gaps = 70/440 (15%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSII---------HKLARARA-------------FDAV 97
AL +F+ + F H T+HSI HKL A++ F V
Sbjct: 21 ALSLFNSS--IQQGFQH---THHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTV 75
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR--IEKFNVQRSVRSLNTL 155
SLL L QN L I N L + F ++K V R N+L
Sbjct: 76 PSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRP-NIFNSL 134
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L +LV++ ++ L F + + K +V++ I+IK C+ +++ + ++L + MG
Sbjct: 135 LGSLVRSNCFEKAWLFFNELKERVKF--DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG 192
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ PN+V +TT++ G GDIE A+ F + + G V + T+TVL++G K G D
Sbjct: 193 LSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGF 252
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ ++M+ NG+ PN TY ++ +C GE + C+ DL
Sbjct: 253 DLFEKMKINGLFPNLYTYNCLMNEYC-----GEGK-----------------ICRAFDLF 290
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFERGSI-PS 393
E +R+ + N ++ +T+I +C+E ++WEA+KL D+ ++ ++ P+
Sbjct: 291 DE--------------MRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPN 336
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
L+TYNTLI G C+ L +A L D + G+ P++ TYN+LI+G+ K GN K +
Sbjct: 337 LITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAR 396
Query: 454 EMLDKGCFPNKTSFSLLIEG 473
EM +G P+K + ++LI+
Sbjct: 397 EMEGRGISPSKVTCTVLIDA 416
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 224/500 (44%), Gaps = 26/500 (5%)
Query: 1 MLRHL--HQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIF------ 52
+L+HL H K+ L+ I + S TV + Q P ++++
Sbjct: 43 LLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINA 102
Query: 53 --RQQNLDLALQIFHYAGK----FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+ Q LD AL F+ F PN ++S++ L R+ F+ ELK+
Sbjct: 103 HLKSQLLDKALIFFNEMVDKGLVFRPNI------FNSLLGSLVRSNCFEKAWLFFNELKE 156
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+K F +I+ G + + + ++ + +V TL++ +N +
Sbjct: 157 --RVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIE 214
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
L F + + +V N +T +LI L KK + + ++M G+ PNL T+ +
Sbjct: 215 RARLFF-DKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCL 273
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ Y G I A +F ++ +RG + TY L+ G + R+ +A K++D+M+ V
Sbjct: 274 MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAV 333
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN +TY +I FC +A +LLD + PS +I+ + G + +
Sbjct: 334 SPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVAD 393
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
L + + + P + +I + ++ +A +++ E+ G +P + Y LI G+C
Sbjct: 394 LAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLC 453
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ E+ +L+ M E VEP+ YN +I G+CK N+ +R+L EM KG PN
Sbjct: 454 MKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVA 513
Query: 466 SFSLLIEGLYESGN--EGEV 483
S+S +I L + G E EV
Sbjct: 514 SYSSIIGVLCKDGKWEEAEV 533
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 143/256 (55%), Gaps = 1/256 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V NV T N LI +C+++ V A +++D+M + PNL+T+ T++GG+ G+++ A
Sbjct: 298 VEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKAS 357
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ + G P TY +L++GY K G + EME G+ P++VT V+I+A+
Sbjct: 358 SLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAY 417
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ ++ +A + M + VP + +I LC +G ++++ +L++ + + P +
Sbjct: 418 VRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSD 477
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
I +T+IH CKE + A +L E E +G +P++ +Y+++I +C+ + EA L D
Sbjct: 478 VIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDK 537
Query: 420 MVEKGVEPNVFTYNML 435
M+E ++P+ NM+
Sbjct: 538 MIELQLKPSASILNMI 553
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 129/258 (50%), Gaps = 11/258 (4%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNIL 191
A F + + V+ +V + NTL+ + + +R ++ L+ + K V PN+ T N L
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV--DQMKKAAVSPNLITYNTL 343
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV----WRGDIENAKRVFGDIL 247
I C +++ A +LD++ S G+ P+LVT+ ++ GY W+G + A+ + G
Sbjct: 344 IGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEG--- 400
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
RG P T TVL+D Y++L + A ++ ME G+ P+ YGV+I C
Sbjct: 401 -RGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
E+ L M + PS + +I C+E A L + + K +P+ A S+II
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSII 519
Query: 368 HWLCKEGKIWEAKKLFDE 385
LCK+GK EA+ L D+
Sbjct: 520 GVLCKDGKWEEAEVLLDK 537
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 141/293 (48%), Gaps = 17/293 (5%)
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
++ PSM + + +I+ ++ ++ A F +++D+G V + L+ ++
Sbjct: 85 NQNPSM---TTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRS 141
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG---KKSGEARNLLDDMLQRKYVPSS 325
A +E+++ V+ + ++G+MI+ C+ KS + LL DM P+
Sbjct: 142 NCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDM---GLSPNV 197
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ +ID C+ G +E A + ++ + + + +I+ L K+G K FD
Sbjct: 198 VIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL---KKDGFDL 254
Query: 386 FER----GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
FE+ G P+L TYN L+ C ++ A L+D+M E+GVE NV TYN LI G C+
Sbjct: 255 FEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCR 314
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
E +++++M PN +++ LI G + GN + ++ ++G
Sbjct: 315 EERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 221/504 (43%), Gaps = 75/504 (14%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
+++ +Q F +A K N+ H+ TY ++I L + + ++ E+ +NP
Sbjct: 103 VNVKMQFFRWAAK-RRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTE 161
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
V+R G A A+ F +I+ Q + ++ N+++ L+ +Y VH ++
Sbjct: 162 LSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMS 221
Query: 177 HKFKVVPNVFTCNILIKALCKK-----------------------------------DDV 201
+ P+ T + LI A CK DDV
Sbjct: 222 TEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDV 281
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
GA+ + +EM P++ T+T ++ G G I+ A F ++ G PD +
Sbjct: 282 HGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNM 341
Query: 262 MDGYIKLGRLTDAVKVMDEM------------------------------------EDNG 285
++ K GRL DA+K+ EM +++G
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P+ TY ++I+ FCK + +A LL++M ++ + P A C +ID L + + + AC
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 346 ELWKRLLRKNCMPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
EL++ L ++NC +A + + +I L K G++ +A +FDE + G P + YN L++G
Sbjct: 462 ELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 520
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + L EA M E G P++ +YN+++ G K G + +L M P+
Sbjct: 521 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 580
Query: 464 KTSFSLLIEGLYESGNEGEVGKVV 487
S++ ++ L +G E K++
Sbjct: 581 VVSYNTVLGALSHAGMFEEAAKLM 604
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 166/359 (46%), Gaps = 5/359 (1%)
Query: 94 FDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
D V L+ ++ C ++F +IR G AGR + A F +++ +
Sbjct: 278 LDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVV 337
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK-KDDVEGAIRVLDE 210
+N ++N L + R D +F+ + +P+V T N +IKAL + K +
Sbjct: 338 MNNMINFLGKAGRLDDAMKLFQEM-GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFER 396
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G+ P+ T++ ++ G+ +E A + ++ ++G+ P Y L+D K R
Sbjct: 397 MKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A ++ E+++N + Y VMI+ K + +A N+ D+M + P
Sbjct: 457 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 516
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
++ L G +++A +R+ C+PD + I++ L K G A ++ ++ +
Sbjct: 517 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 576
Query: 391 I-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ P +++YNT++ + + EA +L ++M G E ++ TY+ +++ K+ + G
Sbjct: 577 VRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHEYTG 635
>gi|326525168|dbj|BAK07854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 223/469 (47%), Gaps = 30/469 (6%)
Query: 33 PPIKP-------WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS------HNYD 79
PP+ P WP+ L + L ++ +++ AL +F A + S + D
Sbjct: 19 PPMPPANLTPTKWPKNLTAEHLHRLVRGERDPRRALALFDAATAAPVSTSVPTQILPSPD 78
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ-NPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
T + +LA A SLL+ + P E F+T++R + RP A++ F
Sbjct: 79 TVSLLTSRLASAGLLPLATSLLSRSRALFPSNADLEPPFLTLLRAFCRTHRPLDALQLFR 138
Query: 139 RI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++ S RS +L LV + L H + + R P T N+L+KA C
Sbjct: 139 SAPSALSLPHSARSYTAVLAGLVAHSHLPLAHSLLADMRAS-GFGPTTATYNVLLKAHCS 197
Query: 198 --KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
++ A+R+ +P P+ ++ T++ G R A+ +F ++++ G P
Sbjct: 198 DAAAHIDDAVRLFRNIPK----PDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIAPTV 253
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT +++ + G L DA+++ DEM G+ PN VTY +I+ CKG ++ A +LL+
Sbjct: 254 VTYTTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLER 313
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ + +P++ + VI+ LC+EG + +A E+ R+ + PD + +I LC G+
Sbjct: 314 LAKEVKLPNTIIYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGR 373
Query: 376 IWEAKKLFDEFERGSI-PSLLTYN-------TLIAGMCESAELTEAGRLWDDMVEKGVEP 427
EA DE + P+ +T++ ++ +C E+ A +++ M +G+
Sbjct: 374 AVEAANYLDEMVLAGVQPNRVTWSLHVRINVAVVTALCVKGEVGRAFQVYQSMRTRGIST 433
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
T+++L++ F K + ++ ++ +ML + C P + ++ +++ G +
Sbjct: 434 EPSTFHLLVEFFSKKNHLEKAAHVVLDMLSERCIPERETWDVIVSGYWS 482
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 7/234 (2%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
A +YT ++ G + L A ++ +M +G P TY V+++A C S A ++
Sbjct: 149 SARSYTAVLAGLVAHSHLPLAHSLLADMRASGFGPTTATYNVLLKAHC----SDAAAHID 204
Query: 314 DDMLQRKYVPSSALCC--KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
D + + +P C +ID LC + +A EL+ ++ P +TII+WL
Sbjct: 205 DAVRLFRNIPKPDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIAPTVVTYTTIINWLA 264
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+EG + +A ++FDE RG P+++TY++LI G+C+ A L + + ++ PN
Sbjct: 265 REGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLERLAKEVKLPNTI 324
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
Y+ +I G CK G +E + +L+ M +G P+ F LI GL ++G E
Sbjct: 325 IYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAA 378
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 180/333 (54%), Gaps = 5/333 (1%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV--PNVFTCNILIKALCKKDDVEGA 204
R S NT+L AL + +D + + + PN + +L++ALC + A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L M S G+ ++VT+ T++ G +++ A + G++ + G P+ Y+ L+ G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y K GR D KV EM + G+EP+ V Y +I++ CK K+ +A ++D M++R P+
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+I+ +C+EG V++A + K++ K PD +T+I L ++ EA L +
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314
Query: 385 EFERGS---IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E RG P+++T+N++I G+C+ + +A ++ M E G N+ TYN+LI G +
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++ + +++EM G P+ ++S+LI+G
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGF 407
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 224/448 (50%), Gaps = 33/448 (7%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I L A D L+ E+ ++ I+ ++ ++++ Y +GR E K F+
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESG-IEPNVVVYSSLLQGYCKSGRWEDVGKVFVE 210
Query: 140 IEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++ V L+++L + K + ++ +M + + PNV T N+LI +
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG-----LEPNVVTYNVLINCM 265
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG---WV 252
CK+ V+ AI VL +M G+ P++VT+ T++ G +++ A + +++ RG
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVK 324
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T+ ++ G +GR+ A +V ME+ G N VTY ++I + K +A L
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW--- 369
+D+M P S +I C+ +V+ A +L + M D I + H+
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL------STMRDRGIEPELFHYIPL 438
Query: 370 ---LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+C++G + A+ LF+E + ++ Y+T+I G C++ +L A L +V++G+
Sbjct: 439 LVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLT 498
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ TY+++I F K G+ + +L++M G P+ F LI+G +GE+ KV
Sbjct: 499 PDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY---STKGEINKV 555
Query: 487 V----SMATASGSVESDSWNFLLTRIVS 510
+ M T + +++S + L T +V+
Sbjct: 556 LELIREMITKNIALDSKIISTLSTSLVA 583
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL---RKNCMPDNAIS 363
GEA +LLD + V + V+ LC G + A L + + C P NA+S
Sbjct: 62 GEATSLLDAL---PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRP-NAVS 117
Query: 364 STII-HWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMV 421
T++ LC + +A L + + ++TY TLI G+C++AE+ +A L +M
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
E G+EPNV Y+ L+QG+CK G ++ ++ EM +KG P+ ++ LI+ L + G
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 482 EVGKVVSMATASG 494
+ V+ M G
Sbjct: 238 KAHGVMDMMVRRG 250
>gi|302813796|ref|XP_002988583.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
gi|300143690|gb|EFJ10379.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
Length = 478
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 210/413 (50%), Gaps = 20/413 (4%)
Query: 78 YDTYHSIIHKLAR-ARAFDAVESLLTELKQNPE-IKCGENLFITVIRNYGLAGRPELAVK 135
Y+T K+A+ + AF+ E ++ +L P + C T++ AG + AVK
Sbjct: 71 YNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCN-----TLVAGLCKAGSFDKAVK 125
Query: 136 TFLRIEKFNVQRS----VRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNI 190
F R+ + + S + + N L++ L + R D + L+F+ R K K + N T I
Sbjct: 126 LFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFE--RCKDKAMINAVTYGI 183
Query: 191 LIKALCKKDDVEGAIRVLDEMP-SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD- 248
LI+ LCK VE +R+L+EM S G+ P+ T+ +I+ G+ +E A F ++
Sbjct: 184 LIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALEFFSNVTQG 243
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
PD L++G K GR A+++++EM+ G +P+ Y +MIE C ++ +
Sbjct: 244 NKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEADK 303
Query: 309 ARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLRKN-CMPDNAISSTI 366
A LL + L++ P+ + ++D L + + E A K +L + P S I
Sbjct: 304 ACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCAI 363
Query: 367 IHWLCKEGKIWEAK-KLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I LCK G+ EA+ L + GS + YN+L+ G+C++A++ EA + +M ++G+
Sbjct: 364 IDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEMQDEGL 423
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
P+V TYN+L+ GFCK+ +E + M+D C P ++ L EG SG
Sbjct: 424 -PSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRSG 475
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 161/332 (48%), Gaps = 11/332 (3%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N+L++ C+ +V A+R++ EM + + PN TH IL G+ G +E A F ++D
Sbjct: 3 NLLVRGYCEAGEVCKALRLVKEMKARDLAPNEATHGEILKGFCQIGRMEEALEHFRSVID 62
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSG 307
V D Y L+DG+ K+ +L+DA + +EM D G P+ VT ++ CK
Sbjct: 63 TSGV-DPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAGSFD 121
Query: 308 EARNLLDDMLQRKYVPSS----ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+A L M +R S+ A +ID LC G+V++A EL + M +
Sbjct: 122 KAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFERCKDKAMINAVTY 181
Query: 364 STIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+I LCK ++ + +L +E RG P TYN+++AG CE + +A + ++
Sbjct: 182 GILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALEFFSNVT 241
Query: 422 EKG-VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ P+ L+ G CK G + + + +LEEM GC P+ + L+IE L SG
Sbjct: 242 QGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEA 301
Query: 481 GEVGKVVSMATASGSVESDSWNFLLTRIVSDL 512
+ K++ G +++ + T IV L
Sbjct: 302 DKACKLLHETLRKGRAPANTGTY--TMIVDGL 331
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 175/409 (42%), Gaps = 47/409 (11%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++R Y AG A++ ++ ++ + + +L Q R + F++
Sbjct: 5 LVRGYCEAGEVCKALRLVKEMKARDLAPNEATHGEILKGFCQIGRMEEALEHFRSVIDTS 64
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P ++ N LI CK + A + +EM +G +P+ VT T++ G G +
Sbjct: 65 GVDPAMY--NTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAGSFDK 122
Query: 239 AKRVFGDILDR----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
A ++F + +R + L+DG + GR+ +A++++ E + N VTYG
Sbjct: 123 AVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFERCKDKAMINAVTYG 182
Query: 295 VMIEAFCKGKKSGEARNLLDDM-LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
++I+ CK K+ + LL++M R P +A ++ CE VE A E + + +
Sbjct: 183 ILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALEFFSNVTQ 242
Query: 354 KN-CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELT 411
N C PD + T+++ LCK G+ +A +L +E +R G PS Y +I +C S E
Sbjct: 243 GNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEAD 302
Query: 412 EAGRLWDDMVEKGVEP-NVFTYNML----------------------------------- 435
+A +L + + KG P N TY M+
Sbjct: 303 KACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCA 362
Query: 436 -IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
I G CK G E L M G N ++ L+ GL ++ GE
Sbjct: 363 IIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEA 411
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 139/333 (41%), Gaps = 7/333 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + R +D AL++ K N TY +I L +++ + LL E+
Sbjct: 149 LIDGLCRAGRVDEALELVFERCKDKAMI--NAVTYGILIQGLCKSKRVEDGLRLLEEMST 206
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN-VQRSVRSLNTLLNALVQNKRY 165
+ + + +++ + E A++ F + + N + TL+N L ++ R
Sbjct: 207 SRGLNPDAATYNSIVAGFCELDMVEQALEFFSNVTQGNKCAPDPVMIGTLVNGLCKSGR- 265
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP-NLVTHT 224
L L + P+ ++I+ LC + + A ++L E G P N T+T
Sbjct: 266 SLQALELLEEMDRVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYT 325
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
I+ G E A+R IL P T ++DG K GR ++A + M
Sbjct: 326 MIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWFLLSMGQ 385
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G + N Y ++ CK K GEA +M Q + +PS ++D C+ K+E+
Sbjct: 386 MGSKANTHIYNSLLGGLCKAAKMGEALAFFHEM-QDEGLPSVVTYNILLDGFCKVVKIEE 444
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
AC ++ ++ C+P T+ + GK+
Sbjct: 445 ACAVFVAMVDAKCLPTAVTYKTLTEGFTRSGKM 477
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+YN L+ G CE+ E+ +A RL +M + + PN T+ +++GFC+IG +E + +
Sbjct: 1 SYNLLVRGYCEAGEVCKALRLVKEMKARDLAPNEATHGEILKGFCQIGRMEEALEHFRSV 60
Query: 456 LD-KGCFPNKTSFSLLIEGL 474
+D G P ++ LI+G
Sbjct: 61 IDTSGVDP--AMYNTLIDGF 78
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 186/385 (48%), Gaps = 37/385 (9%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
+V + NTL+ L +N ++ VH + P++ ++ +CK+ +E A +
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDH-GCTPDIRMYATVLDGVCKEGHLEVAHEI 317
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD------------------- 248
LD MPS G+ PN+V + T+L G E A+ + ++ D
Sbjct: 318 LDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQ 377
Query: 249 ----------------RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G VPD TYT +++G+ K G + +AV ++ M G PN ++
Sbjct: 378 NGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTIS 437
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y ++++ C ++ +A +L+ M+++ P+ VI+ LC++G VE A EL K++L
Sbjct: 438 YTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML 497
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
C PD ST+I L K GK EA +L + +G P+ + Y+++ + + + +
Sbjct: 498 LNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRIN 557
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+++D++ + + + YN +I CK G I L M+ GC PN++++++LI
Sbjct: 558 RVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILI 617
Query: 472 EGLYESGNEGEVGKVVSMATASGSV 496
GL G E ++++ + G++
Sbjct: 618 RGLASEGFVKEAQEMLTELCSKGAL 642
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 188/391 (48%), Gaps = 17/391 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T++++I L R F+ V +L ++ + P+I+ ++ TV+ G E+A
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIR----MYATVLDGVCKEGHLEVA 314
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCN 189
+ R+ + ++ +V NT+L L +R++ L+ MF N V T N
Sbjct: 315 HEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV-----TFN 369
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
IL+ C+ V I +L++M G VP+++T+TT++ G+ G I+ A + +
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P+ +YT+++ G R DA +M +M + G PN VT+ +I CK +A
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LL ML P VID L + GK ++A EL ++ K P+ I S+I
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549
Query: 370 LCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
L KEG+I ++FD + +I S + YN +I+ +C+ A MV G PN
Sbjct: 550 LSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPN 609
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
TY +LI+G G KE +L E+ KG
Sbjct: 610 ESTYTILIRGLASEGFVKEAQEMLTELCSKG 640
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 5/377 (1%)
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDV 201
F V S N +L L KR+ V + + + PNV T N LI LC+
Sbjct: 218 SFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEE-MVRVGCPPNVVTFNTLIGYLCRNGLF 276
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
E +VL +M G P++ + T+L G G +E A + + G P+ Y +
Sbjct: 277 ERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTV 336
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ G R A +++ EM DN ++VT+ ++++ FC+ LL+ ML+
Sbjct: 337 LKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGC 396
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
VP VI+ C+EG +++A L K + C P+ + ++ LC + +A+
Sbjct: 397 VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAED 456
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L + E+G P+ +T+NT+I +C+ + +A L M+ G P++ +Y+ +I G
Sbjct: 457 LMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLG 516
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K G E + +L M++KG PN +S + L EG + +V+ M V S
Sbjct: 517 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL---SKEGRINRVIQMFDNIQDVTIRS 573
Query: 501 WNFLLTRIVSDLDSGAG 517
L ++S L G
Sbjct: 574 DAVLYNAVISSLCKRGG 590
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 168/337 (49%), Gaps = 7/337 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR---GDIE 237
V PN +T +++ALC + + A+ VLDEM G P + IL R G
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFR 170
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD-AVKVMDEMEDN-GVEPNEVTYGV 295
+A RV D+ RG D ++++ G D A++++ ++ + G +P+ V+Y
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ C K+ G ++L+++M++ P+ +I LC G E ++ +++
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAG 414
C PD + +T++ +CKEG + A ++ D G P+++ YNT++ G+C + +A
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L +M + + T+N+L+ FC+ G I +LE+ML+ GC P+ +++ +I G
Sbjct: 351 ELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF 410
Query: 475 YESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIVS 510
+ G E ++ SMA + S+ +L + S
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCS 447
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 9/258 (3%)
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ GY G + +A+R+ + P+A TY ++ GR+ DA+ V+DEM
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARN---LLDDMLQRKYVPSSALCCKVIDLLCEE- 338
G P Y V++EA C G R+ +L D+ R C V++ +C++
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 339 GKVEDACELWKRLLRK-NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT 396
G V++A L + L C PD + ++ LC + + L +E R G P+++T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+NTLI +C + ++ MV+ G P++ Y ++ G CK G+ + IL+ M
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 457 DKGCFPNKTSFSLLIEGL 474
G PN ++ +++GL
Sbjct: 323 SYGLKPNVVCYNTVLKGL 340
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMF 172
+ TVI + G + AV + + + S +L L +R+ DL+ M
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMI 462
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ PN T N +I LCKK VE AI +L +M G P+L++++T++ G
Sbjct: 463 EQG-----CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGK 517
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G + A + ++++G P+ Y+ + K GR+ +++ D ++D + + V
Sbjct: 518 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVL 577
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I + CK + A L M+ +P+ + +I L EG V++A E+ L
Sbjct: 578 YNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELC 637
Query: 353 RKNCM 357
K +
Sbjct: 638 SKGAL 642
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
S +I LC G+ EA + ++ YN +++G C + +L A RL +
Sbjct: 53 SALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASV--- 109
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
V PN +TY +++ C G + + +L+EM +GC P + +++E
Sbjct: 110 PVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEA 159
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 212/436 (48%), Gaps = 10/436 (2%)
Query: 48 VSMIF---RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
SMI R+ +LD ALQ+F+ K N TY ++I+ L + + L+ E+
Sbjct: 424 TSMILGHCRKHDLDSALQVFNQMAK--EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ + +I + G E A + F+ ++ + +V + L++ L +
Sbjct: 482 ILHGILPTAHTCTGPIIALCDM-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 540
Query: 165 YDL-VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
+ + L + SR V PN T N LI L + ++ A VL+ M G+ N+VT+
Sbjct: 541 LKVAIGLFHRMSRDG--VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTY 598
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
++ GY GD + A V ++L RG + TY ++ GY G T A++++D M D
Sbjct: 599 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 658
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G +P+E +Y +I FCK K A L ++M+ P+ +ID C++ K++
Sbjct: 659 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 718
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIA 402
A L + + R C P+ + +IH L K+ A++L E G P+++TY +I
Sbjct: 719 ATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMID 778
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ + A +++ M+E+G PN+ TY+ LI+ + G +E + E+ G P
Sbjct: 779 GLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 838
Query: 463 NKTSFSLLIEGLYESG 478
++ ++ +IE SG
Sbjct: 839 DEITYVKMIEAYIMSG 854
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 164/318 (51%), Gaps = 6/318 (1%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M S G+ PNL+ + ++ G++ +A+ + + + PD TYT ++ G+ +
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 435
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A++V ++M G EPN VTY +I C + EA +L+ +M+ +P++ C
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
I LC+ G EDA L+ + K C P+ + +I LC G + A LF R G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P+ +TYN LI + E+ + A + + M G+ N+ TYN +I+G+C +G+ K+ +
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF--LLTR 507
++ ML +G N +++ +I+G +SGN +++ + G + D W++ L+
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL-MRDGGCKPDEWSYTELICG 674
Query: 508 I--VSDLDSGAGALDELL 523
+S ++S G +E++
Sbjct: 675 FCKISKMESAFGLFNEMV 692
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 154/295 (52%), Gaps = 1/295 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN+ N +I ALCK +V A ++ ++ M P+ T+T+++ G+ + D+++A
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+VF + G P+ TY+ L++G GR+ +A ++ EM +G+ P T I A
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C +A L DM + P+ +I LC G ++ A L+ R+ R P+
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I+ L + +I A + + R G +++TYN +I G C + +A + ++
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M+++G N+ TYN +I+G+C GN +RIL+ M D GC P++ S++ LI G
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDE---MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
Y+ L+ I L RL VMD M GV+PN + Y +I A CK +A ++
Sbjct: 352 AYSALL---IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIM 408
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + + P + +I C + ++ A +++ ++ ++ C P+ ST+I+ LC
Sbjct: 409 KKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 468
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EA L E G +P+ T I +C+ +A RL+ DM KG EPNV+TY
Sbjct: 469 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 528
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
LI G C G K I + M G FPN +++ LI L E+
Sbjct: 529 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 573
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 33/376 (8%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVH 169
E + +I Y + + A +++ + +V++ N L++ L + + +L
Sbjct: 700 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 759
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+M + + PNV T +I LCK A+ + ++M G +PNL+T+++++
Sbjct: 760 VMIEEG-----IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +E A+ +F ++ G +PD TY +++ YI G++ A + M G +P
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 874
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQR-----KYVPSSALCCKVIDLLCEEGKVEDA 344
TYGV+I KG K+ LL D QR VP+ + + D +DA
Sbjct: 875 LWTYGVLI----KGLKN---EYLLAD--QRLAALPDVVPNCSFGYQTTD--------QDA 917
Query: 345 CELWK-RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+ +L + + + ++ L G+ +EA +L +G P YN+L+
Sbjct: 918 VSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 977
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ + A ++ M +G E ++ Y LI C++ KE E ML + P
Sbjct: 978 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 1037
Query: 463 NKTSFSLLIEGLYESG 478
+ ++LI+GL G
Sbjct: 1038 DDVVQAVLIDGLLRDG 1053
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 25/319 (7%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN T LI CK + ++ A +L+ M G PN+ T+ ++ G + + A+
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ +++ G P+ TYT ++DG K G + A+++ ++M + G PN +TY +I A
Sbjct: 756 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K EA NL ++ + +P K+I+ GKVE A R+++ C P
Sbjct: 816 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 875
Query: 361 AISSTIIHWLCKEGKIWEAKKL------------FDEFERGSIP-------------SLL 395
+I L E + + + + ++ ++ S+
Sbjct: 876 WTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQ 935
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
N L++ + + EA L M+ +G+ P+ YN L+ ++ N + + + M
Sbjct: 936 VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHM 995
Query: 456 LDKGCFPNKTSFSLLIEGL 474
+GC + + LI L
Sbjct: 996 STQGCEVHLNGYKELICAL 1014
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 135/332 (40%), Gaps = 21/332 (6%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P + ++ + + + LAL++F+ N TY S+I L + +
Sbjct: 767 FPNVVTYTAMIDGLCKNGSTSLALEMFN--KMIEQGCLPNLLTYSSLIRALGQEGKVEEA 824
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E+L EL+++ I E ++ +I Y ++G+ E A R+ K Q ++ + L+
Sbjct: 825 ENLFAELERHGLIP-DEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 883
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE---GAIRVLDEMPSM 214
L Y L + + +P+V +D V + LD S+
Sbjct: 884 GL--KNEYLL-------ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV 934
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
+ LV++ + G + A + G ++ +G PD Y L+ +++ + A
Sbjct: 935 QVQNALVSNLSTAGRWF------EANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 988
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
+ V M G E + Y +I A C+ + EAR ++ML R + P + +ID
Sbjct: 989 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 1048
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
L +G + E + + MP I + +
Sbjct: 1049 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 188/353 (53%), Gaps = 3/353 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G E A + + +++ + SV ++N+LL ++ ++ +F + V N+F
Sbjct: 413 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG--VANIF 470
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NI++ LCK ++ A +LD M + GMVPN+V++ ++ G+ +G+++ A VF D+
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L R P+ TY++L+DG K G A+ + D+M + P + T+ +I CK +
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EAR+ L + L+ ++PS ++D +EG ++ A +++ + P+ +++
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ CK +I A K DE E+G + Y+ LI G C+ ++ A L+ +++E G+
Sbjct: 651 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
PN YN +I GF + N + + ++M++ + +++ LI+GL + G
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEG 763
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 163/299 (54%), Gaps = 1/299 (0%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P FT N +I LCK + A L G +P+ +T+ +I+ G++ G+I++
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V+ ++ + G P+ TYT L++G+ K R+ A+K DEM + G+E + Y +I+
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK + A++L ++L+ P+ + +I + +E A +K+++
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +T+I L KEG++ A L+ E +G +P ++T++ L+ G+C +L A ++
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
++M K + P+V YN LI G+ + GN KE + +EMLD+G P+ ++ +LI G ++
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 1/302 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T +ILI KK D E A+ + D+M S+ + P T TI+ G G + A+
Sbjct: 537 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 596
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ L+ G++P TY ++DG+IK G + A+ V EM + GV PN VTY +I FCK
Sbjct: 597 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A D+M ++ +ID C+ +E A +L+ LL P+ +
Sbjct: 657 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 716
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I + A + + IP L TY TLI G+ + L A L+ +M+
Sbjct: 717 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 776
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KG+ P++ T+++L+ G C G + +ILEEM K P+ ++ LI G + GN
Sbjct: 777 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 836
Query: 482 EV 483
E
Sbjct: 837 EA 838
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 164/335 (48%), Gaps = 37/335 (11%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN T ++LI+ C ++E A + +M G+ P++ ++L GY+ E A
Sbjct: 396 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 455
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F + +D G V + TY ++M K G++ +A ++D M + G+ PN V+Y MI
Sbjct: 456 KLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGH 514
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ A ++ DML R P+ +ID ++G E A +L+ ++L N P +
Sbjct: 515 CRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTD 574
Query: 361 AISSTIIHWLCKEGKIWEAK-KLFDEFERGSIPSLLTYNT-------------------- 399
+TII+ LCK G++ EA+ KL + E G IPS +TYN+
Sbjct: 575 FTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYRE 634
Query: 400 ---------------LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
LI G C+S + A + D+M EKG+E +V Y+ LI GFCK +
Sbjct: 635 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 694
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ + E+L+ G PN+ ++ +I G + N
Sbjct: 695 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 175/335 (52%), Gaps = 5/335 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+++ ++ A ++ R + F+ ++ + V + +I+I+A+CKK + + +L+E
Sbjct: 262 TVHVMVRACLKEGRVEEAEEYFRETKER-GVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 320
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G VP+ T T+++ V +G++ A R+ ++++ G + T LM GY G
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A+ + +++ ++G+ PN+VTY V+IE C +A L M PS
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII-HWLCKEGKIWEAKKLFDEF-ER 388
++ + E+A +L+ + +C N + I+ WLCK GK+ EA L D +
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAV--DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ 498
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +P++++YN +I G C + A ++ DM+ + ++PNV TY++LI G K G++++
Sbjct: 499 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 558
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ + ++ML P +F+ +I GL + G E
Sbjct: 559 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 593
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 180/365 (49%), Gaps = 3/365 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F ++ Y A R E A+ F + +V V +N LL ALV+ + ++ N
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY-NK 250
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + FT +++++A K+ VE A E G+ + ++ I+ + +
Sbjct: 251 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPN 310
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ ++ +RGWVP T+T ++ + G + +A+++ +EM + G N V
Sbjct: 311 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS 370
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ +C A NL + + + P+ +I+ C G +E A EL+ + ++ N
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ-MKLN 429
Query: 356 CMPDNAISSTIIHWLCKEGKIW-EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAG 414
+P + + + + +W EA KLFDE + ++ TYN +++ +C+ ++ EA
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEAC 489
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L D+MV +G+ PNV +YN +I G C+ GN + +ML + PN ++S+LI+G
Sbjct: 490 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 549
Query: 475 YESGN 479
++ G+
Sbjct: 550 FKKGD 554
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 39/356 (10%)
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
HL+ R F++ VF N L+ A + + +E AI + M ++P + +L
Sbjct: 176 HLINCAKRFDFELDHRVF--NYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 233
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
V R I + ++ ++ RG D T V++ +K GR+ +A + E ++ GV+
Sbjct: 234 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 293
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL--------------------- 327
+ Y ++I+A CK S LL++M +R +VPS A
Sbjct: 294 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 353
Query: 328 -----CCKVIDLL---------CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
C K ++L+ C +G ++ A L+ ++ P+ S +I C
Sbjct: 354 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413
Query: 374 GKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G I +A +L+ + + IP S+ N+L+ G ++ EA +L+D+ V+ GV N+FTY
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTY 472
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
N+++ CK G E +L+ M+++G PN S++ +I G GN V S
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFS 528
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D + L++ YI+ R+ +A+ + M V P +++ A + GE R+L
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ M+ R ++ +EG+VE+A E ++ + D S II +CK+
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+L +E ERG +PS T+ ++I + EA RL ++M+ G N+
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
L++G+C GN + + ++ + G FPNK ++S+LIEG SGN + ++ +
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428
Query: 493 SG 494
+G
Sbjct: 429 NG 430
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 18/275 (6%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +V ++ N+D AL ++ +F S N TY S+I+ ++ D
Sbjct: 607 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEF--GVSPNVVTYTSLINGFCKSNRIDLAL 664
Query: 99 SLLTELKQNPEIKCGENLFITVIRNY--GLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E+++ G L +T G R ++ L E V S + +
Sbjct: 665 KTRDEMREK-----GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI--VY 717
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI-----LIKALCKKDDVEGAIRVLDEM 211
N+++ R DL ++ +K K++ + C++ LI L K+ + A + EM
Sbjct: 718 NSMISGFR-DLNNMEAALVWYK-KMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 775
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
S G+VP+++T ++ G +G +ENA+++ ++ + P Y L+ GY + G L
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 835
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+A + DEM D G+ P++VTY ++I KG +S
Sbjct: 836 KEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 870
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 219/486 (45%), Gaps = 77/486 (15%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
FS N Y+++I + D E L+ E++++ P++ F I +G+
Sbjct: 122 FSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVV----TFNARISALCSSGKV 177
Query: 131 ELAVKTFLRIEKFNV----QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
A + F ++ V Q ++ + N +L + + +F+ K KV N+
Sbjct: 178 LEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFE----KMKVSENLM 233
Query: 187 ---TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ NI + L + + A VL EM MGM PN+ ++ ++ G G + +A+ +
Sbjct: 234 NRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLM 293
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ G +PD TYT L+ GY G++++A V+ EM +G PN T +++ + K
Sbjct: 294 RLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKE 353
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL----------- 352
+ EA LL M ++ YV + C VID LC GK++ A E+ +
Sbjct: 354 GRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLG 413
Query: 353 ------------RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-------------- 386
RK CMPD STII LCK G++ EAKK F E
Sbjct: 414 NSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDV 473
Query: 387 ----------------------ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++G +L TYN+LI G+ ++ E L D+M E+G
Sbjct: 474 FIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERG 533
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
V P+V YN ++ C+ G K+ +L+EML KG PN +SFS+LI+ ++ + V
Sbjct: 534 VSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVD 593
Query: 485 KVVSMA 490
++ +A
Sbjct: 594 EIFEIA 599
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 169/322 (52%), Gaps = 6/322 (1%)
Query: 172 FKNSRHKF-KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
FK+ R +F + P+++ N+L+++ K+ V+ + +M + G+ P T ++G
Sbjct: 7 FKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLL 66
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G +++A+ +F + ++G P+ ++ +L+ GY + G + ++++ EM G PN+
Sbjct: 67 CDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNK 126
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
V Y +I +FCK K+ +A L+D+M + P I LC GKV +A +++
Sbjct: 127 VVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRD 186
Query: 351 LLRKNCM----PDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMC 405
+ + P+ + ++ CKEG + EA+ LF++ + ++ + +YN + G+
Sbjct: 187 MQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLV 246
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+L EA + +MV+ G+EPNV++YN+++ G CK G + ++ M G P+
Sbjct: 247 RIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTV 306
Query: 466 SFSLLIEGLYESGNEGEVGKVV 487
+++ L+ G +G E V+
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVL 328
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
P++ + +L G ++ + D++ G P+ T+ VL+ G L DA ++
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
D+M + G EPNE ++G+++ +C+ + + LL +M + + P+ + +I C+
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----P 392
EGK +DA +L + + PD + I LC GK+ EA ++F + + + P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+++TYN ++ G C+ L EA L++ M N +YN+ + G +IG E +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+EM+D G PN S++++++GL ++G + ++ + T+SG
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 185/406 (45%), Gaps = 36/406 (8%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T++ Y G+ A + + + + N LL +L + R + +
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM-------------------- 216
K V+ V TCNI+I LC ++ AI +++ M + G
Sbjct: 368 EKGYVIDTV-TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSR 426
Query: 217 ---VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+P+L++++TI+ G G + AK+ F +++ + PD+ Y V + + K G+++
Sbjct: 427 KKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISS 486
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A +V+ +ME G TY +I + E L+D+M +R P ++ V+
Sbjct: 487 AFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLS 546
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSI 391
LCE G+V+DA + +L+K P+ + S +I CK ++F+ G
Sbjct: 547 SLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHK 606
Query: 392 PSL--LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+L LT+N L+ G E+ +A L++ +++ + F Y LI CK +
Sbjct: 607 EALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDAS 662
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG----KVVSMAT 491
IL +++DKG + + SF +I+GL + GN+ E K++ MA+
Sbjct: 663 GILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMAS 708
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 126/274 (45%), Gaps = 5/274 (1%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
+Y +II L +A R +A + + + +N ++ ++ I ++ G+ A +
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKN--LQPDSAIYDVFIHSFCKEGKISSAFRVLK 492
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+EK +++++ N+L+ L + ++ + R + V P+V N ++ +LC+
Sbjct: 493 DMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER-GVSPDVSIYNNVLSSLCEG 551
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V+ A VLDEM G+ PN+ + + ++ + D +F L+ +A Y
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEAL-Y 610
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++ + + G + A ++ + D + Y +I+ CK +K +A +L ++
Sbjct: 611 SLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLID 670
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ Y A VID L + G +A EL ++++
Sbjct: 671 KGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM 704
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 173/312 (55%), Gaps = 10/312 (3%)
Query: 182 VPNVFTCNILIKAL---CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+P++ T N LIK L CK + A + +EM + GM+PN++++++++ G+ G +E
Sbjct: 157 IPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEE 216
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYI---KLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+KR+F +++D+G P+ + VL+D K+G L+ A K+ M G E NE++Y +
Sbjct: 217 SKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTI 276
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I +CK K EA NL ++M Q P+ ++ L + GKV DA +L+ +
Sbjct: 277 LINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 336
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAG 414
D+ I + LCK G ++EA +LF+E + + +Y+ LI G+C++ ++ A
Sbjct: 337 ISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAW 396
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG---IRILEEMLDKGCFPNKTSFSLLI 471
+ + ++G++PNV T N++I GFC++ + +E+M + GC P+ +++ L+
Sbjct: 397 EFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLL 456
Query: 472 EGLYESGNEGEV 483
G ES EV
Sbjct: 457 RGFCESNKLEEV 468
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 135/252 (53%), Gaps = 11/252 (4%)
Query: 181 VVPNVFTCNILIKALCKKD---DVEGAIRVLDEMPSMGMVPNLVTHTTILGGY--VWRGD 235
V PN+ N+LI LCK+ D+ A ++ MPS G N +++T ++ GY +W+
Sbjct: 229 VQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWK-- 286
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A ++ ++ G P+ TY+ L+ G ++ G++ DA K+ M+ +G+ + Y +
Sbjct: 287 VEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVI 346
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ CK EA L +++ + ++ID LC+ GKVE A E +K+L ++
Sbjct: 347 FLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEG 406
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER----GSIPSLLTYNTLIAGMCESAELT 411
P+ + +IH C+ ++ +A LF++ E+ G P ++TYNTL+ G CES +L
Sbjct: 407 LQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLE 466
Query: 412 EAGRLWDDMVEK 423
E L M ++
Sbjct: 467 EVVNLLHKMFKR 478
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 142/272 (52%), Gaps = 8/272 (2%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
D+ A F ++ +P +++ L+ G K+ + + ++M G+ P+ T
Sbjct: 70 DVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLN 129
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVP---SSALCCKVIDLLCEEGKVEDACELWKRL 351
++ C + E + +L+R Y+P + K + LC+ G ++A E+++ +
Sbjct: 130 ILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEM 189
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA-- 408
+ +P+ S+++H C GK+ E+K+LF+E ++G P+L+ +N LI +C+
Sbjct: 190 KAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKI 249
Query: 409 -ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+L+ A +L+ M KG E N +Y +LI G+CKI +E + + EM G PN ++
Sbjct: 250 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 309
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG-SVES 498
S L+ GL ++G G+ K+ + ASG SV+S
Sbjct: 310 STLLTGLLQTGKVGDANKLFGVMKASGISVDS 341
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 291 VTYGVMIEAFCKGKKSG-----EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+++ + +F + K+G +A + D M++ +P + +++ L +
Sbjct: 51 ISFQHRLSSFLRNCKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLF 110
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGM 404
L+ ++ PD + + + LC ++ E + RG IP ++TYNTLI G+
Sbjct: 111 SLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGL 170
Query: 405 ---CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
C+ EA ++++M +G+ PNV +Y+ L+ GFC G +E R+ EM+D+G
Sbjct: 171 YGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQ 230
Query: 462 PNKTSFSLLIEGLYESGNEGEV 483
PN F++LI+ L + G G++
Sbjct: 231 PNLVQFNVLIDILCKEGKIGDL 252
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 189/358 (52%), Gaps = 41/358 (11%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PN T N+LI+ CK + A+ V +M S G++PN T T+L G G + +A +
Sbjct: 22 APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALK 81
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE----------- 290
+F ++ ++P + ++ +L+ G+ GR A++ EM+ +GVEP+
Sbjct: 82 LFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALS 138
Query: 291 ---------------------VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+TY V+++ +CK ++ EA++L+ ++L+ Y P+
Sbjct: 139 DSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYS 198
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER- 388
+I+ C+ KVE+A E++ +++ NC+P+ +T+I CK G + +A KLF E E+
Sbjct: 199 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 258
Query: 389 GSIPSLLTYNTLIAGMCES-AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G +++TYNTLI +C+ + A L++ + G+ P + TYN LIQGF + A +
Sbjct: 259 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RAND 316
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
G+R+L M +GC P+ +++ LI GL + + ++ + + +V ++NFL+
Sbjct: 317 GLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNV--TTFNFLI 372
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 181/375 (48%), Gaps = 14/375 (3%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+IR + G+ AV F ++ + + ++NTLL L + + +F+ +
Sbjct: 31 LIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAG- 89
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+P + NIL++ AI EM + G+ P+L ++ +L G + A
Sbjct: 90 PFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEA 146
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+F + PD TY VLMDGY K+G+ +A +M E+ G EPN TY ++I
Sbjct: 147 HALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINC 203
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+CK K EA + M++ VP++ +I C+ G +EDA +L+ + + C
Sbjct: 204 YCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKAT 263
Query: 360 NAISSTIIHWLCKE-GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+T+I LCK+ G ++ A LF++ E G P+++TYN+LI G E A + RL
Sbjct: 264 IVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN--DGLRLL 321
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M +G +P+V TYN LI G C ++ R+ M C PN T+F+ LI GL
Sbjct: 322 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQ 378
Query: 478 GNEGEVGKVVSMATA 492
E ++ TA
Sbjct: 379 KKVEEARNILDRMTA 393
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 191/403 (47%), Gaps = 19/403 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T ++++ L + L E++ P + + I ++R + +AGR A++
Sbjct: 59 NASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNI-LLRGFFMAGR---AIEF 114
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ V+ + S + LL+AL + R H +F P++ T N+L+ C
Sbjct: 115 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS----AMTCSPDIMTYNVLMDGYC 170
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K A ++ E+ G PN+ T++ I+ Y +E A VF +++ VP+A
Sbjct: 171 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 230
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG--EARNLLD 314
T+ L+ G+ K G L DA+K+ EME G + VTY +I++ CK K+ G A +L +
Sbjct: 231 TFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK-KRGGVYTAVDLFN 289
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ P+ +I E + D L + + C PD + +I LC
Sbjct: 290 KLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN 347
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
++ +A++LF+ P++ T+N LI G+C ++ EA + D M P++ T+N
Sbjct: 348 RVEDAQRLFNGM--ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNT 401
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+I FCK G + ++++ML G +PN + L G+ S
Sbjct: 402 IILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSS 444
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A R+F ++L + P+A TY VL+ G+ K G++ AV V +M+ +G+ PN T +
Sbjct: 7 DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ C+ + A L +M ++P+SA ++ G+ A E +K +
Sbjct: 67 LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGV 123
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
PD ++ L G++ EA LF P ++TYN L+ G C+ + EA L
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMT--CSPDIMTYNVLMDGYCKIGQTYEAQSL 181
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
++++ G EPNVFTY+++I +CK+ +E + +M++ C PN +F+ LI G +
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241
Query: 477 SG 478
+G
Sbjct: 242 AG 243
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 36/202 (17%)
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+K +A L ++L + P++ +I C+ G++ A ++ + +P+ +
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI------------------------------- 391
+T++ LC+ G++ A KLF E + G
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASG 122
Query: 392 --PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P L +Y+ L++ + +S + EA L+ M P++ TYN+L+ G+CKIG E
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQ 179
Query: 450 RILEEMLDKGCFPNKTSFSLLI 471
+++E+L G PN ++S++I
Sbjct: 180 SLMKEILKAGYEPNVFTYSIII 201
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYN 398
K + A L+K +L P+ + +I CK G++ +A +F + + G +P+ T N
Sbjct: 5 KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TL+ G+CE +++ A +L+ +M P ++N+L++GF G A I +EM
Sbjct: 65 TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRA---IEFFKEMKAS 121
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
G P+ S+ +L+ L +SG E + S T S + ++N L+
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIM--TYNVLM 166
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +LF E G P+ TYN LI G C+ ++ +A ++ DM G+ PN T N L+
Sbjct: 8 QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
G C+IG +++ EM P S ++L+ G + +G E K + ASG V
Sbjct: 68 LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMK---ASG-V 123
Query: 497 ESD--SWNFLLTRIVSDLDSG 515
E D S++ LL+ + DSG
Sbjct: 124 EPDLESYHILLSALS---DSG 141
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 239/541 (44%), Gaps = 91/541 (16%)
Query: 43 YPKRLVSMIFRQQNL--DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+ L++ I R+ L + ++IF+ A K F +Y Y ++H L+RAR + +S
Sbjct: 68 FSDELLNSILRRLRLNPEACVEIFNLASK-QQKFRPDYKAYCKMVHILSRARNYGQTKSY 126
Query: 101 LTEL---------------KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
L EL + E +F +++ Y G + A+ F + K+
Sbjct: 127 LCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGMVKNALHVFDNMGKYGR 186
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK-------- 197
S+ S N+LL+ LV+ K + V L + F+V P+VFTC+I++ A C+
Sbjct: 187 IPSLLSCNSLLSNLVK-KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAM 245
Query: 198 ----------------------------KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
DVEG RVL M G+ N+VT T+++
Sbjct: 246 AFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKS 305
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV--- 286
Y +G +E A++VF + ++ VPD + VL+DGY + GR+ DAV+V D M + GV
Sbjct: 306 YCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTN 365
Query: 287 --------------------------------EPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+P+ TY +++ +C+ EA L
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCG 425
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M Q++ VP+ ++ G D LWK +L++ + ST++ L K G
Sbjct: 426 RMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLG 485
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
EA KL++ RG + +T N +I+G+C+ ++ EA + D++ +P+V TY
Sbjct: 486 DFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQ 545
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
L G+ +GN KE + + M KG FP ++ LI G ++ + +V +V A
Sbjct: 546 ALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRAR 605
Query: 494 G 494
G
Sbjct: 606 G 606
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 206/464 (44%), Gaps = 50/464 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
++ TY++++ RA D L + Q E+ + +++ Y G A
Sbjct: 400 DHHTYNTLVDGYCRAGHVDEALKLCGRMCQK-EVVPTVMTYNILLKGYSRIG----AFHD 454
Query: 137 FLRIEKFNVQRSVR----SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
L + K ++R V S +TLL AL + +D +++N + ++ + T N++I
Sbjct: 455 VLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLAR-GLLTDTITLNVMI 513
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + V A +LD + P++ T+ + GY G+++ A V + +G
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIF 573
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P Y L+ G K L ++ E+ G+ P TYG +I +C +A
Sbjct: 574 PTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL-------------------- 352
+M+++ + +C K+ + L K ++AC L ++++
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSA 693
Query: 353 ------------------RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IP 392
+K +P+N + + I LCK GK+ +A+KLF + IP
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIP 753
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
TY LI G ++ +A L D+M KG+ PN+ TYN LI+G CK+GN R+L
Sbjct: 754 DEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ KG PN +++ LI+GL +SG+ E ++ G V
Sbjct: 814 RKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGLV 857
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 164/361 (45%), Gaps = 4/361 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNS 175
F ++I++Y G E A + F + + + L++ +N R D V + +
Sbjct: 299 FTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRV--HDY 356
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ V N CN LI CK + A ++L M + P+ T+ T++ GY G
Sbjct: 357 MIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGH 416
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A ++ G + + VP TY +L+ GY ++G D + + M GV NE++
Sbjct: 417 VDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCST 476
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++EA K EA L +++L R + + +I LC+ KV +A E+ +
Sbjct: 477 LLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
C PD + H G + EA + D E +G P++ YNTLI+G + L +
Sbjct: 537 CKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVA 596
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L ++ +G+ P V TY LI G+C IG + EM++KG N S + L
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Query: 475 Y 475
+
Sbjct: 657 F 657
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL-DEMPSMGMVPNLVTHTTILGGYV 231
+NS K +VPN N+ I LCK + A ++ D + S +P+ T+T ++ G
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
GDI A + ++ +G +P+ TY L+ G KLG + A +++ ++ G PN +
Sbjct: 767 IDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAI 826
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
TY +I+ K EA L + M+++ V S
Sbjct: 827 TYNTLIDGLIKSGDVAEAMRLKEKMIEKGLVRGS 860
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 188/353 (53%), Gaps = 3/353 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G E A + + +++ + SV ++N+LL ++ ++ +F + V N+F
Sbjct: 373 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC--GVANIF 430
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NI++ LCK ++ A +LD M + GMVPN+V++ ++ G+ +G+++ A VF D+
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L R P+ TY++L+DG K G A+ + D+M + P + T+ +I CK +
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EAR+ L + L+ ++PS ++D +EG ++ A +++ + P+ +++
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ CK +I A K DE E+G + Y+ LI G C+ ++ A L+ +++E G+
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
PN YN +I GF + N + + ++M++ + +++ LI+GL + G
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEG 723
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 163/299 (54%), Gaps = 1/299 (0%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P FT N +I LCK + A L G +P+ +T+ +I+ G++ G+I++
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A V+ ++ + G P+ TYT L++G+ K R+ A+K DEM + G+E + Y +I+
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK + A++L ++L+ P+ + +I + +E A +K+++
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 707
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +T+I L KEG++ A L+ E +G +P ++T++ L+ G+C +L A ++
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
++M K + P+V YN LI G+ + GN KE + +EMLD+G P+ ++ +LI G ++
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 1/302 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T +ILI KK D E A+ + D+M S+ + P T TI+ G G + A+
Sbjct: 497 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 556
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ L+ G++P TY ++DG+IK G + A+ V EM + GV PN VTY +I FCK
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A D+M ++ +ID C+ +E A +L+ LL P+ +
Sbjct: 617 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 676
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+++I + A + + IP L TY TLI G+ + L A L+ +M+
Sbjct: 677 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 736
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KG+ P++ T+++L+ G C G + +ILEEM K P+ ++ LI G + GN
Sbjct: 737 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 796
Query: 482 EV 483
E
Sbjct: 797 EA 798
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 164/335 (48%), Gaps = 37/335 (11%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN T ++LI+ C ++E A + +M G+ P++ ++L GY+ E A
Sbjct: 356 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 415
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F + +D G V + TY ++M K G++ +A ++D M + G+ PN V+Y MI
Sbjct: 416 KLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGH 474
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ A ++ DML R P+ +ID ++G E A +L+ ++L N P +
Sbjct: 475 CRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTD 534
Query: 361 AISSTIIHWLCKEGKIWEAK-KLFDEFERGSIPSLLTYNT-------------------- 399
+TII+ LCK G++ EA+ KL + E G IPS +TYN+
Sbjct: 535 FTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYRE 594
Query: 400 ---------------LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
LI G C+S + A + D+M EKG+E +V Y+ LI GFCK +
Sbjct: 595 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 654
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ + E+L+ G PN+ ++ +I G + N
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 175/335 (52%), Gaps = 5/335 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+++ ++ A ++ R + F+ ++ + V + +I+I+A+CKK + + +L+E
Sbjct: 222 TVHVMVRACLKEGRVEEAEEYFRETKER-GVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 280
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G VP+ T T+++ V +G++ A R+ ++++ G + T LM GY G
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 340
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A+ + +++ ++G+ PN+VTY V+IE C +A L M PS
Sbjct: 341 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 400
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII-HWLCKEGKIWEAKKLFDEF-ER 388
++ + E+A +L+ + +C N + I+ WLCK GK+ EA L D +
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAV--DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ 458
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +P++++YN +I G C + A ++ DM+ + ++PNV TY++LI G K G++++
Sbjct: 459 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 518
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ + ++ML P +F+ +I GL + G E
Sbjct: 519 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 553
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 180/365 (49%), Gaps = 3/365 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+F ++ Y A R E A+ F + +V V +N LL ALV+ + ++ N
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY-NK 210
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + FT +++++A K+ VE A E G+ + ++ I+ + +
Sbjct: 211 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPN 270
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ ++ +RGWVP T+T ++ + G + +A+++ +EM + G N V
Sbjct: 271 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS 330
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++ +C A NL + + + P+ +I+ C G +E A EL+ + ++ N
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ-MKLN 389
Query: 356 CMPDNAISSTIIHWLCKEGKIW-EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAG 414
+P + + + + +W EA KLFDE + ++ TYN +++ +C+ ++ EA
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEAC 449
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L D+MV +G+ PNV +YN +I G C+ GN + +ML + PN ++S+LI+G
Sbjct: 450 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 509
Query: 475 YESGN 479
++ G+
Sbjct: 510 FKKGD 514
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 39/356 (10%)
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
HL+ R F++ VF N L+ A + + +E AI + M ++P + +L
Sbjct: 136 HLINCAKRFDFELDHRVF--NYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 193
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
V R I + ++ ++ RG D T V++ +K GR+ +A + E ++ GV+
Sbjct: 194 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 253
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL--------------------- 327
+ Y ++I+A CK S LL++M +R +VPS A
Sbjct: 254 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 313
Query: 328 -----CCKVIDLL---------CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
C K ++L+ C +G ++ A L+ ++ P+ S +I C
Sbjct: 314 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 373
Query: 374 GKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G I +A +L+ + + IP S+ N+L+ G ++ EA +L+D+ V+ GV N+FTY
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTY 432
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
N+++ CK G E +L+ M+++G PN S++ +I G GN V S
Sbjct: 433 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFS 488
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD--- 95
P + +V ++ N+D AL ++ +F S N TY S+I+ ++ D
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEF--GVSPNVVTYTSLINGFCKSNRIDLAL 624
Query: 96 ----------------AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
A +L+ + +++ ++LF ++ GL+ R
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE-VGLSPN---------R 674
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP-NVFTCNILIKALCKK 198
I ++ R LN + ALV K+ N R +P ++ T LI L K+
Sbjct: 675 IVYNSMISGFRDLNNMEAALVWYKK-------MINDR-----IPCDLGTYTTLIDGLLKE 722
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A + EM S G+VP+++T ++ G +G +ENA+++ ++ + P Y
Sbjct: 723 GRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIY 782
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
L+ GY + G L +A + DEM D G+ P++VTY ++I KG +S
Sbjct: 783 NTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 830
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 3/300 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
PNV + NI+I CK ++E A+ L EM +G P +++I+ + G++ A
Sbjct: 95 APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMD 154
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF ++ +G PD + VL+ G + ++ +A ++ M G +P+ VTY MI C
Sbjct: 155 VFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLC 214
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K KK EA LL+ M Q P+ +ID LC+ +++ A E+++++ C
Sbjct: 215 KWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEP 274
Query: 362 ISST--IIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
S +I+ LCK + EAK++F E RG P+++TYNTL+ G+ +A+L +A L
Sbjct: 275 AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTY 334
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M+++ PN+FTY +LI CK +E ++L M DKG P+ + +L+ L +G
Sbjct: 335 FMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAG 394
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 10/345 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PN N LI LCK + A L MP PN+V++ I+ GY +IE A
Sbjct: 60 LFPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKAL 118
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++ + G P Y+ ++ + K G ++ A+ V EM G EP+ V + V++
Sbjct: 119 AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL 178
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ +K EAR L M R P +I LC+ K+++A L +R+ +++ P
Sbjct: 179 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF 238
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIP---SLLTYNTLIAGMCESAELTEAGRLW 417
+T+I LCK ++ +A ++F++ G P + LI G+C++ EA ++
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMF 298
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+M +G+ P V TYN L++G ++ + + MLD+ PN ++ +LI L ++
Sbjct: 299 QEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKT 358
Query: 478 GNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSDLDSGAGALDE 521
E K++S G V S W LL+R+ + AG LD+
Sbjct: 359 DQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL-----ARAGRLDD 398
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 179/401 (44%), Gaps = 48/401 (11%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLFITVIRN 123
Y + + + N +Y+ II +AR + + L E+++ +P + + +++++
Sbjct: 86 YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTP---HAYSSIVQS 142
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--NSRHKFKV 181
+ G A+ F + + + + N LL+ L + ++ +F+ NSR
Sbjct: 143 FCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG---C 199
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA-- 239
P+V T N +I LCK ++ A+ +L+ M + P VT+TT++ ++ A
Sbjct: 200 KPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYE 259
Query: 240 -----------------------------------KRVFGDILDRGWVPDATTYTVLMDG 264
K +F ++ RG P TY L++G
Sbjct: 260 VFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEG 319
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ +L DA+++ M D PN TY ++I + CK + EA LL M + +VPS
Sbjct: 320 LLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPS 379
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ ++ L G+++DA EL+K + R NC S+ ++ + + G + EAK
Sbjct: 380 LKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLK 439
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+ + G +P TY+ L+ G+C + +A +L +++V G
Sbjct: 440 QMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 38/313 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV--------- 286
+ A+ + ++ G+ PD ++ +L+ G+ K G +D M + G+
Sbjct: 10 VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69
Query: 287 -------------------------EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
PN V+Y ++I+ +CK + +A L +M + +
Sbjct: 70 LISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGH 129
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
P+ ++ C+ G V A +++ + K C PD + ++ L + KI EA++
Sbjct: 130 PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARE 189
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
LF RG P ++TYNT+IAG+C+ +L EA L + M ++ V P TY LI C
Sbjct: 190 LFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLC 249
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFS--LLIEGLYESGNEGEVGKVVSMATASG-SVE 497
K ++ + E+M + C + ++S +LI GL ++ GE ++ G S
Sbjct: 250 KFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPT 309
Query: 498 SDSWNFLLTRIVS 510
++N LL ++S
Sbjct: 310 VVTYNTLLEGLLS 322
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I + E+ + +A + ++M G P+V ++ +LI+GF K G+ + G L+ ML+ G
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 461 FPNKTSFSLLIEGLYESGNEGEV 483
FPN ++ LI L ++G E
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEA 83
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 168/315 (53%), Gaps = 1/315 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P++ T N+++ +C++ V+ A+ L+ +PS G PN V++ +L G E+A+++
Sbjct: 14 PDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKL 73
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ +G P+ T+ +L+ + G + A++V++++ G PN ++Y ++ AFCK
Sbjct: 74 MEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCK 133
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
KK +A ++ M+ R P ++ LC G+V+ A +L +L K C P
Sbjct: 134 QKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLIS 193
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I L K GK EA +L DE +G P ++TY T+ +G+C ++ EA R + +
Sbjct: 194 YNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQ 253
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+ G+ P V YN ++ G CK I + M+ GC PN++++++L+EGL G
Sbjct: 254 DMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVK 313
Query: 482 EVGKVVSMATASGSV 496
E ++ + G V
Sbjct: 314 EARDLLGQLCSRGVV 328
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 133/300 (44%), Gaps = 37/300 (12%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR + A++ + + + + S N +L L +R++ + + HK PNV T
Sbjct: 30 GRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK-GCPPNVVT 88
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+LI LC++ VE A+ VL+++P G PN +++ +L + + ++ A ++
Sbjct: 89 FNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMV 148
Query: 248 DRGWVPDATTYTVLM-----------------------------------DGYIKLGRLT 272
RG PD +Y L+ DG K G+
Sbjct: 149 SRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTK 208
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A++++DEM G++P+ +TY + C+ K EA + P+ L ++
Sbjct: 209 EALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAIL 268
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
LC+ + +A +L+ ++ CMP+ + + ++ L EG + EA+ L + RG +
Sbjct: 269 LGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 198/410 (48%), Gaps = 37/410 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G+ + ++ F R+ +V+ +V SL +L+ L + ++ + K V NV
Sbjct: 203 GGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK-GVKANVV 261
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N I+ K+ D+ G +L M G+ N+VT+T ++ G+ G IE A+R+F ++
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++G D YT ++ + G + A+ + DEM D G+ P+ TYG +I CK +
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 381
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW----KRLLRKNCMPDNAI 362
A+ L+++M + + + +ID CE G V++A L K+ L + N+I
Sbjct: 382 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 441
Query: 363 SS-------------------------------TIIHWLCKEGKIWEAKKLFDEFE-RGS 390
+S T+I CKEG EAK++F E E +G+
Sbjct: 442 ASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGN 501
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+P+++TYN LI G + + EA +L D++ +G+ P+V+T LI G C G ++
Sbjct: 502 VPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALK 561
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+ +EM +G PN +++ +I GL + G E K+ +G D+
Sbjct: 562 LFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDT 611
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 2/377 (0%)
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
K E F + R Y A++ F +EK RS L AL + + D
Sbjct: 152 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLR 211
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F+ + V V++ I++ LCK+ DVE +++DE+ + G+ N+VT+ + GY
Sbjct: 212 FFRRMVN-LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY 270
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
R D+ + + G + TYT+L+ G+ +G++ +A ++ +EM + G+E +
Sbjct: 271 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 330
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
Y +I C+ A L D+M + +PS+ +I +C+ G++E A L
Sbjct: 331 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 390
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAE 409
+ K + I +T+I C+ G + EA +L E+ + S + YN++ +G+C+
Sbjct: 391 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 450
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
EA L MVE+GV PN ++ LI +CK GN E R+ EM +KG PN ++++
Sbjct: 451 KDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNV 510
Query: 470 LIEGLYESGNEGEVGKV 486
LI+G + GN E K+
Sbjct: 511 LIDGYSKRGNMKEAHKL 527
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 177/339 (52%), Gaps = 2/339 (0%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+EK V +V + L++ + + +F+ R K + +V+ +I C+
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK-GIEADVYVYTSIISCNCRSG 344
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+V+ A+ + DEM G++P+ T+ ++ G G +E A+ + ++ +G + +
Sbjct: 345 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 404
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY + G + +A+++ ME G+E + Y + CK + EA+ LL M++R
Sbjct: 405 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 464
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P++ +ID+ C+EG +A +++ + K +P+ + +I K G + EA
Sbjct: 465 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 524
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE E RG IP + T +LI G C ++ A +L+D+M ++G+ PNV TY +I G
Sbjct: 525 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 584
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
K G ++E ++ +EM + G P+ T +S L+ L+ +
Sbjct: 585 LSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 39/369 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++ I + V +LT L + + C + +I + G+ E A +
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILT-LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRL 317
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + ++ V ++++ ++ ++F K ++P+ T LI +C
Sbjct: 318 FEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK-GLIPSAHTYGALIHGVC 376
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR-------------VF 243
K +E A +++EM G+ N V T++ GY G ++ A R VF
Sbjct: 377 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 436
Query: 244 G----------------------DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+++RG P+ ++T L+D Y K G +A +V EM
Sbjct: 437 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 496
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E+ G PN +TY V+I+ + K EA L D++ R +P C +I C +GKV
Sbjct: 497 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 556
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
+ A +L+ + ++ +P+ + +I L K+G+ EA KL+DE E G P Y++L
Sbjct: 557 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL 616
Query: 401 IAGMCESAE 409
+ G SAE
Sbjct: 617 V-GSLHSAE 624
>gi|15220591|ref|NP_172051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334182311|ref|NP_001184914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213450|sp|Q9SYK1.1|PPR11_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g05600
gi|4836924|gb|AAD30626.1|AC007153_18 Hypothetical protein [Arabidopsis thaliana]
gi|53828567|gb|AAU94393.1| At1g05600 [Arabidopsis thaliana]
gi|56790224|gb|AAW30029.1| At1g05600 [Arabidopsis thaliana]
gi|332189741|gb|AEE27862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189742|gb|AEE27863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 227/477 (47%), Gaps = 11/477 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
WP+ L P L ++ +Q+N AL++F A + P++ HN Y ++I L ++ +
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
+ ++ +K++ +C +++F +VIR + AGR E A+ F + +FN S +TLL
Sbjct: 66 KYVIERMKEDS-CECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ 124
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+V+ + +F+ + ++V + N+L+K LC+ + + A +V EM G
Sbjct: 125 EMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY 184
Query: 218 PNLVTHTTILGGYVWRGDIENAKRV----FGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
P+ ++ ++ G+ G +E A + F I +G D Y +L+D G + D
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG--EARNLLDDMLQRKYVPSSALCCKV 331
A++++ ++ G++ + Y + + G + LL + L R +P +
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGS 390
L EEGK+ + E+ + K P I + LC+ GK+ EA + + E +G
Sbjct: 305 ATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGH 364
Query: 391 -IPSLLTYNTLIAGMCESAELTEA-GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+P++ YN LI G+C+ + EA G L + N TY L+ G C+ G E
Sbjct: 365 CLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEA 424
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE-VGKVVSMATASGSVESDSWNFL 504
+++EEML K FP ++ ++I+GL + E V + M + ES W L
Sbjct: 425 SQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 116/241 (48%), Gaps = 6/241 (2%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR--KYVPSSALCCKVIDLLCEEGKVEDAC 345
P +T ++ + K K A L ++ +R Y + ++ +ID+L + +V +
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
+ +R+ +C +++ +++I + G++ +A LF E + L+++TL+ M
Sbjct: 67 YVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEM 126
Query: 405 CESAELTEAGRLWDDMVEKGVEPN--VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
+ +EL A ++ G E N + N+L++ C++ + ++ +EM +GC+P
Sbjct: 127 VKESELEAACHIFRKYC-YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP 185
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDEL 522
++ S+ +L++G G E ++ S + + ++ RI+ D AG +D+
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245
Query: 523 L 523
+
Sbjct: 246 I 246
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLD-EMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
P F +KALC+ ++ A+ V++ EM +P + + ++ G G A
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 242 VFGDILDR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ + V + TY L+DG + G+ +A +VM+EM P TY +MI+
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
C + EA L++M+ + VP S++ + + +C
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW-VPDATTYT 259
VEG VL M S G P + + G ++ A V + +G +P Y
Sbjct: 315 VEGE-EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDN-GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
VL+ G G+ +AV + +M NE TY +++ C+ + EA ++++ML
Sbjct: 374 VLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLI 433
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ + P +I LC+ + +A + ++ ++ +P++++ + +C
Sbjct: 434 KSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 204/420 (48%), Gaps = 29/420 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL-----KQNPEIKCGENLFITVIRNYGLAGRPE 131
N +Y+ ++ L + + E L+ ++ + P++ + T++ Y AG+ E
Sbjct: 44 NVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLV----TYSTLLSGYCKAGKVE 99
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+ + + ++ ++ +L ++ R L + P + T N L
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVMASLCKSARL-GEALELLEEMIRAGCCPTLITFNTL 158
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I C++ ++E A +L M + G+ ++VT+ T++ G G ++ A+++ + G
Sbjct: 159 ISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGC 218
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD Y+ + G K G++ +A +V+++M D+ +PN VTY +++ CK K A
Sbjct: 219 APDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALE 278
Query: 312 LLDDMLQRKYVPSSALC-------CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+++ M SS C V+D LC+ G+ ++A + + + R C PD S
Sbjct: 279 MMEQM------ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 365 TIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++++ LCK GKI EA + E G P+ +TY +L+ G+C L EA R+ ++M
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392
Query: 424 G-----VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G P+V TYN LI G CK G + ++ + M +GC P+ S+S ++EGL SG
Sbjct: 393 GGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 162/302 (53%), Gaps = 8/302 (2%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ NTL++ + K ++ + + + V +V T N L+ LCK ++ A ++L+
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQ-TMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLER 212
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G P++V +++ + G G + NA +V + D P+ TY ++DG K G+
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272
Query: 271 LTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ A+++M++M +G N V Y +++ CK ++ EAR++++ M + P
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+++ LC+ GK+E+A E + + + C P+ +++H LC G++ EA+++ +E G
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392
Query: 390 SI------PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
PS+ TYN LI G+C++ + +A + + M +G +P+ +Y+ +++G + G
Sbjct: 393 GGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Query: 444 NA 445
A
Sbjct: 453 RA 454
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 40/376 (10%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ N L+N + R + + + + PNV + N L++ LCK + A ++ +
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAAR-GIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70
Query: 211 MPSMG--MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
M S G P+LVT++T+L GY G +E ++ + +++ RG PDA YT +M K
Sbjct: 71 MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKS 130
Query: 269 GR-----------------------------------LTDAVKVMDEMEDNGVEPNEVTY 293
R L A ++ M +GV+ + VTY
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTY 190
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+++ CK + EA LL+ M P + LC+ GKV +A ++ +++
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELT 411
+ P+ +TI+ LCK GKI A ++ ++ G +++ Y+T++ G+C+
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA + + M G P+V TY+ L+ G CK G +E + + EM +GC PN ++ L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370
Query: 472 EGLYESGNEGEVGKVV 487
GL G E ++V
Sbjct: 371 HGLCSCGRLAEAERMV 386
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 40/348 (11%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN----------------------- 219
PN T N L+ K+ R+L+ M + G+ PN
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 220 --------------LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
LVT++T+L GY G +E ++ + +++ RG PDA YT +M
Sbjct: 68 VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K RL +A+++++EM G P +T+ +I C+ K A +LL M
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
++D LC+ G++++A +L +R+ C PD S+ ++ LCK GK+ A ++ ++
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK-GVEPNVFTYNMLIQGFCKIG 443
+ P+++TYNT++ G+C+S ++ A + + M G NV Y+ ++ G CK+G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMA 490
+E ++E M GC P+ ++S L+ GL ++G E V V MA
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 4/236 (1%)
Query: 247 LDR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+DR G P++ T+ L++G+ K GR D ++++ M G++PN V+Y ++E CK ++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 306 SGEARNLLDDMLQR--KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
EA L+ DM+ R + P ++ C+ GKVE++ EL K ++ + PD +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 364 STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ ++ LCK ++ EA +L +E R G P+L+T+NTLI+G C L A L M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GV+ +V TYN L+ G CK G +E ++LE M GC P+ ++S + GL +SG
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 151/306 (49%), Gaps = 8/306 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++++I R + + +SLL + + +K + T++ AGR + A + R
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQTMAASG-VKADVVTYNTLMDGLCKAGRLQEAEQLLER 212
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ V + ++ + L ++ + H + + R PNV T N ++ LCK
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHD-PNVVTYNTILDGLCKSG 271
Query: 200 DVEGAIRVLDEMPSM-GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
++ A+ ++++M S G N+V ++T++ G G + A+ V + G PD TY
Sbjct: 272 KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTY 331
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+ L++G K G++ +AV+ + EM G +PN VTY ++ C + EA ++++M
Sbjct: 332 SSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSS 391
Query: 319 RKYV-----PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
PS + +I LC+ G+++DA + ++R+ + C PD STI+ L +
Sbjct: 392 GGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARS 451
Query: 374 GKIWEA 379
G+ +A
Sbjct: 452 GRALQA 457
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
R V S N L+ LV+N R H + + H+ ++ PN +T NI++ LCK+ A R
Sbjct: 314 RRVESYNRWLSGLVRNGRVGEAHELLREMAHE-RIHPNSYTYNIIVSGLCKEGKAFDARR 372
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
V + + S M P++VT+T++L Y +G+I A R+ ++ +G P++ TY VL+
Sbjct: 373 VENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLW 432
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM---------- 316
+ GR T+A ++++ M + G + ++I+ C+ K A ++D M
Sbjct: 433 RAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGR 492
Query: 317 -------------LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ ++ +P +I LC+EG+ ++A + ++ K+ PD+ I
Sbjct: 493 LGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIY 552
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T IH CK GK A K+ + E +G PS TYN LI G E + E +L +M E
Sbjct: 553 DTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEE 612
Query: 423 KGVEPNVFTYNMLIQGFCKIG 443
KGV PNV TYN LI+ FC+ G
Sbjct: 613 KGVSPNVLTYNSLIKSFCQQG 633
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 24/314 (7%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N + L + V A +L EM + PN T+ I+ G G +A+RV I
Sbjct: 320 NRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRS 379
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
PD TYT L+ Y G + A +++DEM G PN TY V++++ + ++ E
Sbjct: 380 GVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTE 439
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE----LWK-------RL------ 351
A LL+ M ++ Y +A C +ID LC K++ A +W+ RL
Sbjct: 440 AERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLS 499
Query: 352 ------LRKNCMPDNAISSTIIHWLCKEGKIWEAKK-LFDEFERGSIPSLLTYNTLIAGM 404
+ + C+PD S +I LCKEG+ EAKK L + + P + Y+T I G
Sbjct: 500 VVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGY 559
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C+ + + A ++ DM +KG P+ TYN+LI+GF + + E ++++ EM +KG PN
Sbjct: 560 CKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNV 619
Query: 465 TSFSLLIEGLYESG 478
+++ LI+ + G
Sbjct: 620 LTYNSLIKSFCQQG 633
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 183/397 (46%), Gaps = 27/397 (6%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
TV+ + G E A + R+ + +V + N+ ++AL + R + +FK+ +
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQED 271
Query: 179 FK---VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
++ P+ T ++++ C V+ A ++D M G + + ++ L G V G
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + ++ P++ TY +++ G K G+ DA +V + + + P+ VTY
Sbjct: 332 VGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ A+C A +LD+M Q+ P+S ++ L G+ +A L +R+ K
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKG 451
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGS-----------------------I 391
D A + II LC+ K+ A + D +E GS +
Sbjct: 452 YSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCL 511
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P +TY+ LI+ +C+ EA + +M+ K + P+ Y+ I G+CK G I++
Sbjct: 512 PDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKV 571
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
L +M KGC P+ +++LLI G E E+ K++S
Sbjct: 572 LRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMS 608
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 194/444 (43%), Gaps = 58/444 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
Y+ +I R D VE+L +L P++ NL + + + AGR ELA +
Sbjct: 112 VYNRLILTALRESRLDLVEALYKDLLLAGAQPDV-FTRNLLLRALCD---AGRMELAQRV 167
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP-----NVFTCNIL 191
F E V R+ S L + R S KV+ N+ CN +
Sbjct: 168 F---EAMPV-RNEFSFGILARGYCRAGR----------SVDALKVLDGMPSMNLVVCNTV 213
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ CK+ VE A R+++ M G+ PN+VT + + G + +A R+F D + W
Sbjct: 214 VAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKD-MQEDW 272
Query: 252 V-----PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
PD T+ V++ G+ G + +A ++D M G +Y + + +
Sbjct: 273 QHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRV 332
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM-PDNAISST 365
GEA LL +M + P+S ++ LC+EGK DA + + +R M PD ++
Sbjct: 333 GEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTS 391
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++H C +G I A ++ DE ++G P+ TYN L+ + + TEA RL + M EKG
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKG 451
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-----------------------CF 461
+ N++I G C+ + I++ M ++G C
Sbjct: 452 YSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCL 511
Query: 462 PNKTSFSLLIEGLYESGNEGEVGK 485
P++ ++S+LI L + G E K
Sbjct: 512 PDRITYSILISALCKEGRFDEAKK 535
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 133/303 (43%), Gaps = 35/303 (11%)
Query: 69 KFHPNFSHNYDTYHSIIHKLAR-ARAFDA--VESLLTELKQNPEIKCGENLFITVIRNYG 125
+ HPN +Y TY+ I+ L + +AFDA VE+ + +P++ + +++ Y
Sbjct: 346 RIHPN---SY-TYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVT----YTSLLHAYC 397
Query: 126 LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
G A + + + + + N LL +L + R + + K + +
Sbjct: 398 SKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSL-DT 456
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGM-----------------------VPNLVT 222
CNI+I LC+ ++ A+ ++D M G +P+ +T
Sbjct: 457 AGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRIT 516
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
++ ++ G + AK+ +++ + PD+ Y + GY K G+ + A+KV+ +ME
Sbjct: 517 YSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDME 576
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G P+ TY ++I F + KS E L+ +M ++ P+ +I C++G +
Sbjct: 577 KKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLT 636
Query: 343 DAC 345
C
Sbjct: 637 RPC 639
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P + + ++I E +++ L+K LL PD + ++ LC G++ A+++
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRV 167
Query: 383 FD------EFERG--------------------SIPS--LLTYNTLIAGMCESAELTEAG 414
F+ EF G +PS L+ NT++AG C+ + EA
Sbjct: 168 FEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAE 227
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF----PNKTSFSLL 470
RL + M +G+ PNV T+N I CK G + RI ++M + P++ +F ++
Sbjct: 228 RLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVM 287
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIVSD 511
+ G ++G E +V + G + +S+N L+ +V +
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 216/432 (50%), Gaps = 20/432 (4%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+N + ALQ F + + + F HN +T+ II L RA + +L ++ + ++ E
Sbjct: 23 KNSEHALQFFRWVERSNL-FXHNRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDE 80
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+L++ +I +YG AG + +VK F ++E+ V R+++S + L +++ RY + F N
Sbjct: 81 DLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRRGRYMMAKRYF-N 139
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P T N++I VE + R +M S + P++VT+ T++ GY
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSREITPDVVTYNTMINGYYRVB 199
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+E ++ F ++ R P TYT L+ GY + R+ BA+ + +EM+ G++PN +TY
Sbjct: 200 KMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBALXLXEEMKXFGIKPNAITYS 259
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPS-SALCCKVIDLLCEEGKVEDACELWKRLLR 353
++ C +K EAR++L +M+ + P+ +++ ++I C+ G ++ A ++ K ++R
Sbjct: 260 TLLPGLCDAEKMSEARSILKEMVXKYXAPTDNSIFMRLISGQCKVGDLDAAADVJKAMIR 319
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIA 402
+ + +I CK G+ +A KL D+ I PS YN LI
Sbjct: 320 LSIPTEAGHYGVLIEXYCKAGQYDKAVKLLDKVIEKDIISRPQNTLXMEPS--AYNXLIE 377
Query: 403 GMCESAELTEAGRLWDDMVEKGVE-PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+C + + +A L ++++ GV+ P N LI+G G+ +L+ ML +
Sbjct: 378 YLCNNGQTAKAETLVRZLMKLGVQDPTAL--NTLIRGHSXEGSPDSAFELLKIMLRRKVD 435
Query: 462 PNKTSFSLLIEG 473
+ ++ L +
Sbjct: 436 SEQXAYDXLXQS 447
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 172/396 (43%), Gaps = 25/396 (6%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV-----PNVFTCN-----ILIKALCKKDD 200
S+ L+ + Y+++H KNS H + N+F N +I+ L +
Sbjct: 2 SIRNLVPSFDHELVYNVLHGA-KNSEHALQFFRWVERSNLFXHNRETHLKIIEILGRASK 60
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A +L +MP G+ + ++ Y G ++ + ++F + + G +Y
Sbjct: 61 LNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDA 120
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L ++ GR A + ++M G+EP T+ VMI F K + DM R+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSRE 180
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P +I+ K+E+ + + + +N P +T+I ++ +A
Sbjct: 181 ITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBAL 240
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM-LIQG 438
L +E + I P+ +TY+TL+ G+C++ +++EA + +MV K P + M LI G
Sbjct: 241 XLXEEMKXFGIKPNAITYSTLLPGLCDAEKMSEARSILKEMVXKYXAPTDNSIFMRLISG 300
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK---------VVSM 489
CK+G+ +J+ M+ + +LIE ++G + K ++S
Sbjct: 301 QCKVGDLDAAADVJKAMIRLSIPTEAGHYGVLIEXYCKAGQYDKAVKLLDKVIEKDIISR 360
Query: 490 ATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVK 525
+ +E ++N L+ + ++G A E LV+
Sbjct: 361 PQNTLXMEPSAYNXLIEYLC---NNGQTAKAETLVR 393
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 186/377 (49%), Gaps = 2/377 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I G + A++ +E+ +++ V N ++++L +NK ++ K
Sbjct: 179 TLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAK 238
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
++ PNV T LI C + A+ +L+EM + P++ T + ++ G ++
Sbjct: 239 -QIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKA 297
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK V ++ PD TY L+DGY + + A V + M +GV P +Y +MI+
Sbjct: 298 AKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMID 357
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
CK K EA +L ++M + +P++ +ID LC+ G++ +L ++ ++ +
Sbjct: 358 GLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLA 417
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
D S++I LCK + +A LF + I P + TY LI G+C+ L A ++
Sbjct: 418 DVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVF 477
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ KG ++ TY ++I GFCK G E + +L +M D GC PN +F ++I L+E
Sbjct: 478 QHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEK 537
Query: 478 GNEGEVGKVVSMATASG 494
+ K++ A G
Sbjct: 538 DENDKAEKLLREMIARG 554
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 179/361 (49%), Gaps = 12/361 (3%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLMFKNSRHKFKVVPNVFT 187
AV F R+ N +L++LV+ +R+ HL FK + ++ T
Sbjct: 53 AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKG------ITSDLVT 106
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
NILI C + + VL + G P+++T TT++ G RG+++ A + D++
Sbjct: 107 LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVV 166
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ D +Y L++G K+G A+++M +E+ ++P+ V Y ++I++ CK K G
Sbjct: 167 ALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVG 226
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA NL +M ++ P+ +I C G + +A L + KN PD S +I
Sbjct: 227 EACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILI 286
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L KEGK+ AK + + + P ++TYN+L+ G E+ A +++ M + GV
Sbjct: 287 DALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT 346
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P V +Y ++I G CK E I + EEM K PN +F+ LI+GL +SG V +
Sbjct: 347 PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDL 406
Query: 487 V 487
V
Sbjct: 407 V 407
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 6/277 (2%)
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
Y D +A +F +L P + ++ +K+ R A+ + ++ G+ +
Sbjct: 44 YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VT ++I FC + + ++L +L+R Y P +I LC G+V+ A +
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESA 408
++ D T+I+ LCK G+ A +L E SI P ++ YN +I +C++
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNK 223
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ EA L+ +M K + PNV TY LI GFC +G E + +L EM K P+ +FS
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFS 283
Query: 469 LLIEGLYESGNEGEV--GKVVSMATASGSVESDSWNF 503
+LI+ L G EG++ K+V V+ D +
Sbjct: 284 ILIDAL---GKEGKMKAAKIVLAVMMKAYVKPDVVTY 317
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 48/363 (13%)
Query: 67 AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRN 123
A + +PN TY ++I+ +LL E+K NP++ F +I
Sbjct: 237 AKQIYPNVV----TYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYT----FSILIDA 288
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
G G+ + A + K V+ V + N+L++ +F NS + V P
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVF-NSMAQSGVTP 347
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
V + I+I LCK V+ AI + +EM ++PN +T +++ G G I +
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+ DR + D TY+ L+D K L A+ + +M ++P+ TY ++I+ CKG
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKG 467
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
G+++ A E+++ LL K D
Sbjct: 468 -----------------------------------GRLKIAQEVFQHLLIKGYHLDIRTY 492
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I CK G EA L + E G IP+ +T++ +I + E E +A +L +M+
Sbjct: 493 TVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIA 552
Query: 423 KGV 425
+G+
Sbjct: 553 RGL 555
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 228/501 (45%), Gaps = 44/501 (8%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-KQNPEIKCGENL 116
+L + F +A K P + H+ + Y S++ L++ R F AV L+ E+ K+NP++ E L
Sbjct: 128 NLGYRFFVWAAK-QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE-L 185
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F+ +++ + A + A++ + KF + LL+AL ++ +F++ R
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+F V FT L+ C+ + A VL +M G P++V +T +L GY G +
Sbjct: 246 MRFPVNLRYFTS--LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+A + D+ RG+ P+A YTVL+ K+ R+ +A+KV EME E + VTY +
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ FCK K + +LDDM+++ +PS ++ ++ E+ EL +++ +
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEY 423
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGR 415
PD I + +I CK G++ EA +L++E E G P + T+ +I G+ L EA
Sbjct: 424 HPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASD 483
Query: 416 LWDDMVEKGV--------------------------------------EPNVFTYNMLIQ 437
+ +MV +G+ E NV ++ + I
Sbjct: 484 HFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIH 543
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G KE EM++ P +F+ L++GL + N G++ +
Sbjct: 544 ALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAAER 603
Query: 498 SDSWNFLLTRIVSDLDSGAGA 518
S+ R V DL A +
Sbjct: 604 EMSFKMYKRRGVQDLTEKAKS 624
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 199/386 (51%), Gaps = 11/386 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLM 171
F ++R R A+ LR + + V S +TLL L K+ +L+H+M
Sbjct: 51 FTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMM 110
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
++ + P+V + + +I K+ DV A + +M G+ PN+VT +++ G
Sbjct: 111 AEDGDN---CPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLC 167
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
++ A+ V ++D +P+ TTY L+ GY+ G+ T+AV+++ EM +G PN V
Sbjct: 168 KVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVV 227
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++I+ CK EAR + + M+Q P + ++ EG + + + K L
Sbjct: 228 TYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNV-KDL 286
Query: 352 LRKNCMPDNAISSTI-IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAE 409
+ +N M N + +I I+ CK G++ EA F + ++ G +P ++TY T+I G+C+
Sbjct: 287 MVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGR 346
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L +A + M++ G+ PN+ T+ LI GF G ++ + EM+D+G P+ T F+
Sbjct: 347 LDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTA 406
Query: 470 LIEGLYESGNEGEVGKVVSMATASGS 495
+I+ L++ G E K+ + +G+
Sbjct: 407 MIDRLFKEGKVTEAQKLFDLMPRAGA 432
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 182/368 (49%), Gaps = 2/368 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ TVI + G A F ++ + +V + N++++ L + + D + +
Sbjct: 124 YSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 183
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ ++PN T N LI A+R+L EM G PN+VT+ ++ G
Sbjct: 184 DE-HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFH 242
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ +F ++ G PDATTY L+ GY G L + V D M NG+ N T+ +
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIE 302
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I A+CK + EA M Q ++P VID LC+ G+++DA + +++
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
P+ +T+IH GK +A++LF E +RG P + + +I + + ++TEA +
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+D M G +PNV +YN +I G+ G E +++L++ML G P +F+ L++G+
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482
Query: 476 ESGNEGEV 483
G + +V
Sbjct: 483 SMGLKPDV 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 173/378 (45%), Gaps = 22/378 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N T +S+I L + +A D E++L ++ + I + ++I Y +G+ AV+
Sbjct: 155 NVVTCNSVIDGLCKVQAMDKAEAVLQQMI-DEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 213
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + +V + N L++ L ++ + +F NS + P+ T L+
Sbjct: 214 LKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIF-NSMIQSGPKPDATTYGSLLHGYA 272
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ ++ V D M GM N T + + Y G ++ A F + G++PD
Sbjct: 273 TEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIV 332
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT ++DG K+GRL DA+ +M D+G+ PN +T+ +I F K +A L +M
Sbjct: 333 TYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEM 392
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ R P + +ID L +EGKV +A +L+ + R P+ +T+IH G++
Sbjct: 393 MDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 452
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTL-------------------IAGMCESAELTEAGRL 416
E KL D+ G P+ +T+NTL I CE + + L
Sbjct: 453 GEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTL 512
Query: 417 WDDMVEKGVEPNVFTYNM 434
+ +M+ K + + T N+
Sbjct: 513 FREMLGKADKTDTITENI 530
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 198/410 (48%), Gaps = 37/410 (9%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G+ + ++ F R+ +V+ +V SL +L+ L + ++ + K V NV
Sbjct: 207 GGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK-GVKANVV 265
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N I+ K+ D+ G +L M G+ N+VT+T ++ G+ G IE A+R+F ++
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++G D YT ++ + G + A+ + DEM D G+ P+ TYG +I CK +
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 385
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW----KRLLRKNCMPDNAI 362
A+ L+++M + + + +ID CE G V++A L K+ L + N+I
Sbjct: 386 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 445
Query: 363 SS-------------------------------TIIHWLCKEGKIWEAKKLFDEFE-RGS 390
+S T+I CKEG EAK++F E E +G+
Sbjct: 446 ASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGN 505
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+P+++TYN LI G + + EA +L D++ +G+ P+V+T LI G C G ++
Sbjct: 506 VPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALK 565
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
+ +EM +G PN +++ +I GL + G E K+ +G D+
Sbjct: 566 LFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDT 615
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 2/377 (0%)
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
K E F + R Y A++ F +EK RS L AL + + D
Sbjct: 156 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLR 215
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F+ + V V++ I++ LCK+ DVE +++DE+ + G+ N+VT+ + GY
Sbjct: 216 FFRRMVN-LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY 274
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
R D+ + + G + TYT+L+ G+ +G++ +A ++ +EM + G+E +
Sbjct: 275 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 334
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
Y +I C+ A L D+M + +PS+ +I +C+ G++E A L
Sbjct: 335 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 394
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAE 409
+ K + I +T+I C+ G + EA +L E+ + S + YN++ +G+C+
Sbjct: 395 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 454
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
EA L MVE+GV PN ++ LI +CK GN E R+ EM +KG PN ++++
Sbjct: 455 KDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNV 514
Query: 470 LIEGLYESGNEGEVGKV 486
LI+G + GN E K+
Sbjct: 515 LIDGYSKRGNMKEAHKL 531
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 177/339 (52%), Gaps = 2/339 (0%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+EK V +V + L++ + + +F+ R K + +V+ +I C+
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK-GIEADVYVYTSIISCNCRSG 348
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+V+ A+ + DEM G++P+ T+ ++ G G +E A+ + ++ +G + +
Sbjct: 349 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 408
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DGY + G + +A+++ ME G+E + Y + CK + EA+ LL M++R
Sbjct: 409 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 468
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P++ +ID+ C+EG +A +++ + K +P+ + +I K G + EA
Sbjct: 469 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 528
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE E RG IP + T +LI G C ++ A +L+D+M ++G+ PNV TY +I G
Sbjct: 529 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 588
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
K G ++E ++ +EM + G P+ T +S L+ L+ +
Sbjct: 589 LSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 164/369 (44%), Gaps = 38/369 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY++ I + V +LT L + + C + +I + G+ E A +
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILT-LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRL 321
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + + ++ V ++++ ++ ++F K ++P+ T LI +C
Sbjct: 322 FEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK-GLIPSAHTYGALIHGVC 380
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR-------------VF 243
K +E A +++EM G+ N V T++ GY G ++ A R VF
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 440
Query: 244 G----------------------DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+++RG P+ ++T L+D Y K G +A +V EM
Sbjct: 441 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 500
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E+ G PN +TY V+I+ + K EA L D++ R +P C +I C +GKV
Sbjct: 501 EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 560
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
+ A +L+ + ++ +P+ + +I L K+G+ EA KL+DE E G P Y++L
Sbjct: 561 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL 620
Query: 401 IAGMCESAE 409
+ + + E
Sbjct: 621 VGSLHSADE 629
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 195/400 (48%), Gaps = 20/400 (5%)
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPE-LAVKTFLRIEKFNVQRSVRSLNTLLN 157
S+L L +P + +L +T A RP +++ + +++ +V V SL+ LL+
Sbjct: 41 SVLPHLAASPSLP---HLLLTA----SAAARPHATSLRFYAQLKSLSVPIPVASLHPLLS 93
Query: 158 ALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
+L + L ++ R + + F NI+++ LC A+ +L +MP
Sbjct: 94 SLPSAPAFALFADIY---RLRLPLCTTTF--NIMLRHLCATGKPVRALELLRQMPR---- 144
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVK 276
PN VT+ T++ G+ RG ++ A V ++ +RG + PD TY L+ G+ K+GR+ DA K
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAK 204
Query: 277 VMDEMEDNG-VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
V DEM G V P+ V Y +I +C K A +DM+QR + A ++ L
Sbjct: 205 VFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHAL 264
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSL 394
+G+ DA + + + R PD + +I+ CKEG +A ++F+E R G +
Sbjct: 265 FMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATA 324
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+TY +LI ++ E RL+ V+KG+ P+V YN LI C G+ + I+ E
Sbjct: 325 VTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAE 384
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
M K P+ +++ LI G G E ++ T G
Sbjct: 385 MEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 197/397 (49%), Gaps = 19/397 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+ H ++ L A AF +L ++ + C F ++R+ G+P A++ +
Sbjct: 87 SLHPLLSSLPSAPAF----ALFADIYRLRLPLC-TTTFNIMLRHLCATGKPVRALELLRQ 141
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + N + NT++ R + + R + + P+ +T LI CK
Sbjct: 142 MPRPNAV----TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197
Query: 200 DVEGAIRVLDEMPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E A +V DEM + G V P+ V + ++GGY RG ++ A + D++ RG TY
Sbjct: 198 RMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATY 257
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+L+ GR +DA V++EM+ NG+ P+ TY ++I +CK +A + ++M +
Sbjct: 258 NLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSR 317
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ ++ +I +G+V++ L+K ++K PD + + +I+ C G +
Sbjct: 318 KGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMER 377
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A ++ E E+ I P +TYNTLI G C L EA L D+M ++G++P++
Sbjct: 378 AFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL-------- 429
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G CK G + +++EM+ KG P+ +++ LIEGL
Sbjct: 430 GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 175/359 (48%), Gaps = 5/359 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T++ Y AGR E A + I + N L+ AL R +F +
Sbjct: 222 YNTMVNGYCRAGRIEDARRL---INGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDML 278
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
H+ P+V T +IL+ A CK+ A+ +LDEM + G P++VT+ ++ GD+
Sbjct: 279 HR-GCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDV 337
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A + ++ G PDA TYT ++ R + +++ EM N P+EVT+ +
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ + C+ A ++D M + V ++D LC+ G+V+DA EL RL C
Sbjct: 398 VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 457
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
PD +T++ LC + A++L E P +T+NT++A +C+ + A R
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ + M E G P++ TYN +I G C + + +L ++ GC P+ +F+ L++GL
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 171/373 (45%), Gaps = 37/373 (9%)
Query: 156 LNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L +LVQ D ++F + + + P V CNILIK LC V A RV ++
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF---AAL 213
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKR--------------------------------V 242
G +VT+ T++ GY G IE+A+R V
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAV 273
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F D+L RG P TY++L+D K A+ ++DEM G EP+ VTY V+I A C
Sbjct: 274 FDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCN 333
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
EA N+L ++ P + V+ LC + ++ EL + NC PD
Sbjct: 334 EGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVT 393
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+TI+ LC++G + A ++ D E G + ++TY++++ G+C+ + +A L +
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK 453
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G +P+ Y +++G C + ++ EML C P++ +F+ ++ L + G
Sbjct: 454 SYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVD 513
Query: 482 EVGKVVSMATASG 494
+VV + +G
Sbjct: 514 RAIRVVEQMSENG 526
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 230/550 (41%), Gaps = 97/550 (17%)
Query: 16 LQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
+ S GG C PP+ P + KRL S + A ++F G S
Sbjct: 176 MASGGGRNC--------PPVVPC--NILIKRLCS----DGRVSDAERVFAALGP-----S 216
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
TY+++++ RA + L+ + P+ F +IR + GR A+
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTF----TFNPLIRALCVRGRIPDALA 272
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F + SV + + LL+A + Y + R K P++ T N+LI A+
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK-GCEPDIVTYNVLINAM 331
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL----GGYVWR------------------ 233
C + DV+ A+ +L +PS G P+ VT+T +L G W+
Sbjct: 332 CNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDE 391
Query: 234 -------------GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
G ++ A V + + G V D TY+ ++DG +GR+ DAV+++
Sbjct: 392 VTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSR 451
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS--------SALCCK-- 330
++ G +P+ + Y +++ C ++ A L+ +ML P ++LC K
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511
Query: 331 -------------------------VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ID LC E ++DA EL L C PD +T
Sbjct: 512 VDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNT 571
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ LC + +A++L R + P LT+NT+I +C+ LT+A M E G
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
PN TY++++ K G A+ + +L M + P+ +++ +I L ++G E
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEAL 689
Query: 485 KVVSMATASG 494
++ + ++G
Sbjct: 690 DLLRVMVSNG 699
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 200/428 (46%), Gaps = 9/428 (2%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRP 130
N + + T+++I+ L + D ++ + ++ C ++ + +++ GR
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH---GCVADIVTYSSILDGLCDVGRV 442
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ AV+ R++ + + + T+L L ++++ + P+ T N
Sbjct: 443 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCS-DCPPDEVTFNT 501
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
++ +LC+K V+ AIRV+++M G P++VT+ I+ G I++A + D+ G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD T+ L+ G + R DA ++M M + P+E+T+ +I + C+ +A
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L M + VP+S+ V+D L + GK + A EL + N PD +T+I L
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNL 679
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K GK+ EA L G P TY +L G+C A R+ + + G+ P+
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDT 739
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
YN ++ GFC+ I M+ GC P+++++ +L+E L G E ++++
Sbjct: 740 TFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLAS 799
Query: 490 ATASGSVE 497
+ G ++
Sbjct: 800 LCSLGVLD 807
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 189/409 (46%), Gaps = 12/409 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAVKTF 137
TY+ +I+ + D ++L+ L P C + + V+++ + R + +
Sbjct: 323 TYNVLINAMCNEGDVDEALNILSNL---PSHGCKPDAVTYTPVLKSLCGSERWKEVEELL 379
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ N + NT++ +L Q D + ++ S H V ++ T + ++ LC
Sbjct: 380 AEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG--CVADIVTYSSILDGLC 437
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
V+ A+ +L + S G P+ + +TT+L G E A+ + ++L PD
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+ ++ + G + A++V+++M +NG P+ VTY +I+ C +A LL D+
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P ++ LC + EDA +L ++R NC PD +T+I LC++G +
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617
Query: 377 WEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+A + L E G +P+ TY+ ++ + ++ + A L M P++ TYN +
Sbjct: 618 TQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTV 675
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL-YESGNEGEV 483
I K G +E + +L M+ G P+ T++ L G+ E G + V
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 189/432 (43%), Gaps = 17/432 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR-ARAFDAV 97
P + +V+ + +Q +D A+++ + + + TY SI+ L R DAV
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH--GCVADIVTYSSILDGLCDVGRVDDAV 446
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E LL+ LK K + TV++ + E A + + + + NT++
Sbjct: 447 E-LLSRLKSY-GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVA 504
Query: 158 ALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L Q D +V M +N P++ T N +I LC + ++ A+ +L ++ S
Sbjct: 505 SLCQKGLVDRAIRVVEQMSENG-----CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQS 559
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++VT T+L G E+A+++ +++ PD T+ ++ + G LT
Sbjct: 560 CGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQ 619
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A++ + M +NG PN TY ++++A K K+ A LL M P VI
Sbjct: 620 AIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVIS 677
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIP 392
L + GK+E+A +L + ++ PD ++ + +C+E A ++ + G P
Sbjct: 678 NLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSP 737
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
YN ++ G C A + MV G P+ TY +L++ G E R+L
Sbjct: 738 DTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLL 797
Query: 453 EEMLDKGCFPNK 464
+ G K
Sbjct: 798 ASLCSLGVLDKK 809
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 9/273 (3%)
Query: 227 LGGYVWRGDIENAKRVFGDILDRGW--VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
L V RG+I+ A +F + G P +L+ GR++DA +V +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G VTY M+ +C+ + +AR L++ M + P + +I LC G++ DA
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDA 270
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAG 403
++ +L + C P S ++ CKE +A L DE +G P ++TYN LI
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
MC ++ EA + ++ G +P+ TY +++ C KE +L EM C P+
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390
Query: 464 KTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +F+ ++ L + G +VV + G V
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 40/412 (9%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
+PEL V F + V +V S N L+ L + R +F+N+ + +PN FT
Sbjct: 3 KPEL-VLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARI-CMPNKFTY 60
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
ILI+ D++ AI++L+EM S G N V HTT++ G G + A F +
Sbjct: 61 GILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMA 119
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
+ PD TYT L+ K G+ +A ++ EM G P+ VT+ +I+ CK +
Sbjct: 120 KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179
Query: 309 ARNLLDDMLQRKYVPSSA--------LCCK----------------------------VI 332
A +L+D++QR S A LC K VI
Sbjct: 180 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 239
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI- 391
+ C+ ++ A +L + ++ K C+P+ + +I LCK ++ EA++L ++ G
Sbjct: 240 NGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCS 299
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P+++TY+T+I G+C+ ++ +A L+ M + PNV T+N+LI G CK +E ++
Sbjct: 300 PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 359
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
M + GC P+ +++ LI+GL +S E ++ SG +++ +
Sbjct: 360 YHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 411
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 197/403 (48%), Gaps = 15/403 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY +++H L +A FD + +L E+ C + F T+I G E A
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQ---GCAPDTVTFSTLIDGLCKFGSEEQA---- 180
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQN--KRYDLVHLMFK--NSRHKFKVVPNVFTCNILIK 193
R+ + +QR + + + ++Q +Y+ V L K P V N++I
Sbjct: 181 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 240
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK D++ A ++L+ M G VPN+ T T ++ G + A+++ ++ G P
Sbjct: 241 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSP 300
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TY+ +++G K G++ DA ++ ME PN VT+ ++I+ CK K+ EAR L
Sbjct: 301 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 360
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCK 372
M + P +ID LC+ +V++A +L++ + NA++ ST+ H
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 420
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G++ +A ++F ++G P L TY +LI C+++ E L ++M KG P V T
Sbjct: 421 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 480
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++ G + + + I++ + M +GC + ++L++EG+
Sbjct: 481 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 523
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 209/444 (47%), Gaps = 42/444 (9%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I + A D LL E+K + + + T+++ AGR A++
Sbjct: 56 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSSG-FEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F + K + V + L++AL + ++D M + + P+ T + LI LC
Sbjct: 115 FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQ-GCAPDTVTFSTLIDGLC 172
Query: 197 KKDDVEGAIRVLDEMPSMGM------------------------------------VPNL 220
K E A RVL+++ GM P +
Sbjct: 173 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 232
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+ ++ G+ D+++A ++ ++++G VP+ T+T+L+ G K R+ +A +++++
Sbjct: 233 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 292
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G PN VTY +I CK + +A L M +R P+ +ID LC+ +
Sbjct: 293 MVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 352
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERG-SIPSLLTYN 398
+E+A +L+ R+ C PD +++I LCK ++ EA +LF E G S + +TY+
Sbjct: 353 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 412
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TL G + +A R++ +V+KG P++ TY LI +CK A E + ++EEM K
Sbjct: 413 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 472
Query: 459 GCFPNKTSFSLLIEGLYESGNEGE 482
G P + S ++ GL+E GN E
Sbjct: 473 GFPPRVNTLSAVLGGLFE-GNHTE 495
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 202/436 (46%), Gaps = 46/436 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N T+ +I L +A + LL ++ C N+ + TVI G+ + A
Sbjct: 266 NVFTFTILITGLCKANRVGEAQQLLEKMVMG---GCSPNVVTYSTVINGLCKQGQVDDAY 322
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ F +E+ N +V + N L++ L + KR + ++ R P++ T N LI
Sbjct: 323 ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET-GCAPDIITYNSLIDG 381
Query: 195 LCKKDDVEGAIRVLDEMPSMGM-VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK V+ A ++ +P G+ N VT++T+ GY G + +A R+F ++D+G+ P
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441
Query: 254 DATTYTVLMDGYIKLGRLTD-----------------------------------AVKVM 278
D TYT L+ Y K R + A+++
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 501
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD---DMLQRKYVPSSALCCKVIDLL 335
D M G + + Y +++E + K +A +L+ D RK+ PSS+ +++ L
Sbjct: 502 DSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESL 561
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C+ GK +DA +L ++ + + + ++ L + + EA ++F+ G P +
Sbjct: 562 CQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEI 621
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T N +I+ +C +A++ +A L M + G P++ T N LI G+CK G A ++LEE
Sbjct: 622 STVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEE 681
Query: 455 MLDKGCFPNKTSFSLL 470
M + G PN T+ LL
Sbjct: 682 MTEAGLEPNDTTHDLL 697
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V N + ++ C+ + EA L + + R +P+ +I G ++ A
Sbjct: 18 VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAI 77
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMC 405
+L + + + + +T++ LC G++ EA + F + P ++TY L+ +C
Sbjct: 78 QLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALC 137
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
++ + EA + +MV +G P+ T++ LI G CK G+ ++ R+LE+++ +G +
Sbjct: 138 KAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA 197
Query: 466 SFSLLIEGLYESGNEGEVG-KVVSMATASGSVESD-SWNFLLTRI--VSDLDSGAGALDE 521
+F +I+ L N E+ KV+ + A G + +N ++ DLDS L+
Sbjct: 198 AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEV 257
Query: 522 LLVKNC 527
++ K C
Sbjct: 258 MIEKGC 263
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 204/401 (50%), Gaps = 8/401 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL--AV 134
N+ T+++++ R+ + E +L + + N+ + + L R A+
Sbjct: 394 NFVTFNTLLQGFCRSNQMEQAEQVLVYILSS---GLSVNMDVCSYVIHRLMERSGFVSAL 450
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K ++ N++ S L L+ L + + + + + L FK + K + N T N L+
Sbjct: 451 KIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVK-GLAANTVTSNALLH 509
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LC++ ++E VL +M G++ + +++ T++ G G IE A ++ +++ + + P
Sbjct: 510 GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQP 569
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY LM G +G++ D +++ E ++ G PN TY +++E +CK + +A
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFF 629
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
++ K SS + +I C G V +A +L + + +P A S++IH +C
Sbjct: 630 KNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCI 689
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
G++ EAK++F+E G +P++ Y LI G C+ ++ G + +M G+ PN TY
Sbjct: 690 GRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITY 749
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
++I G+CK+GN KE +L EM+ G P+ +++ L +G
Sbjct: 750 TIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKG 790
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 176/367 (47%), Gaps = 40/367 (10%)
Query: 145 VQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
V V + T +NA + R D V L K V PNV T N +I L K E
Sbjct: 251 VAPDVFTFTTAINAFCKGGRVGDAVDLFCK--MEGLGVFPNVVTYNNVIDGLFKSGRFEE 308
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A+R D M + P++VT+ ++ G + E A V ++ G+ P+ + L+D
Sbjct: 309 ALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALID 368
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY + G + +A++V DEM G++PN VT+ +++ FC+ + +A +L +L
Sbjct: 369 GYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSV 428
Query: 324 SSALCCKVIDLLCEEG-----------------KVED------------------ACELW 348
+ +C VI L E +V D A ELW
Sbjct: 429 NMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELW 488
Query: 349 KRLLRKNCMPDNAISS-TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCE 406
+L + N ++S ++H LC+ G + E ++ + E+G + ++YNTLI G C+
Sbjct: 489 FKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCK 548
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
++ EA +L ++MV++ +P+ +TYN L++G +G + R+L E + G PN +
Sbjct: 549 WGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYT 608
Query: 467 FSLLIEG 473
++LL+EG
Sbjct: 609 YALLLEG 615
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 168/327 (51%), Gaps = 11/327 (3%)
Query: 179 FKVVPNVFTCNI---------LIKALCKKDDVEGAIRVLDEMPSM-GMVPNLVTHTTILG 228
K+V + + NI L+ LCK + AI + ++ ++ G+ N VT +L
Sbjct: 450 LKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLH 509
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G RG++E V +L++G + D +Y L+ G K G++ +A K+ +EM +P
Sbjct: 510 GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQP 569
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ TY +++ K + LL + + +VP+ +++ C+ ++EDA + +
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFF 629
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCES 407
K L + + + + +I C+ G + EA KL D + RG +P+ TY++LI GMC
Sbjct: 630 KNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCI 689
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ EA ++++M +G+ PNVF Y LI G CK+G IL EM G PNK ++
Sbjct: 690 GRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITY 749
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+++I+G + GN E ++++ +G
Sbjct: 750 TIMIDGYCKLGNMKEARELLNEMIRNG 776
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 186/391 (47%), Gaps = 6/391 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R ++ A Q+ Y S N D +IH+L F + ++T+L I+
Sbjct: 407 RSNQMEQAEQVLVYI--LSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSG-NIRV 463
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFN-VQRSVRSLNTLLNALVQNKRYDLVHLM 171
++L ++ A++ + ++ + + + N LL+ L + + V +
Sbjct: 464 SDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEV 523
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K K ++ + + N LI CK +E A ++ +EM P+ T+ ++ G
Sbjct: 524 LKQMLEKGLLLDRI-SYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLA 582
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G I++ R+ + + G+VP+ TY +L++GY K R+ DAVK ++ VE + V
Sbjct: 583 DMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSV 642
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
Y ++I A+C+ EA L D M R +P+ A +I +C G+V++A E+++ +
Sbjct: 643 VYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEM 702
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAEL 410
+ +P+ + +I CK G++ + E I P+ +TY +I G C+ +
Sbjct: 703 RNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNM 762
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
EA L ++M+ G+ P+ TYN L +G+CK
Sbjct: 763 KEARELLNEMIRNGIAPDTVTYNALQKGYCK 793
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 167/363 (46%), Gaps = 39/363 (10%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V P + TCN+L+ +L K +++ + V D + G+ P++ T TT + + G + +A
Sbjct: 217 VFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAV 275
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + G P+ TY ++DG K GR +A++ D M + V P+ VTYGV+I
Sbjct: 276 DLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGL 335
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
K + EA +L +M + P+ + +ID C +G + +A + + K P+
Sbjct: 336 MKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNF 395
Query: 361 AISSTIIHWLCKEGKIWEAKKLF--------------------DEFERGSIPSLLTYNT- 399
+T++ C+ ++ +A+++ ER S L T
Sbjct: 396 VTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTK 455
Query: 400 ---------------LIAGMCESAELTEAGRLWDDMVE-KGVEPNVFTYNMLIQGFCKIG 443
L+ G+C+ +EA LW + KG+ N T N L+ G C+ G
Sbjct: 456 LLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERG 515
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWN 502
N +E +L++ML+KG ++ S++ LI G + G E K+ M ++ ++N
Sbjct: 516 NMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYN 575
Query: 503 FLL 505
FL+
Sbjct: 576 FLM 578
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 331 VIDLLCEEGKV---EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++ +LC + K A +++ ++ P + ++ L K ++ ++ ++FD
Sbjct: 189 LLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLAC 248
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+G P + T+ T I C+ + +A L+ M GV PNV TYN +I G K G +E
Sbjct: 249 QGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEE 308
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGL-----YESGNEGEVGKVVSMATASGSV 496
+R + M+ P+ ++ +LI GL +E NE V ++ SM A V
Sbjct: 309 ALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLV-EMYSMGFAPNEV 361
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 180/333 (54%), Gaps = 5/333 (1%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV--PNVFTCNILIKALCKKDDVEGA 204
R S NT+L AL + +D + + + PN + +L++ALC + A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L M S G+ ++VT+ T++ G +++ A + G++ + G P+ Y+ L+ G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y K GR D KV EM + G+EP+ V Y +I++ CK K+ +A ++D M++R P+
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+I+ +C+EG V++A + K++ K PD +T+I L ++ EA L +
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314
Query: 385 EFERGS---IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E RG P+++T+N++I G+C+ + +A ++ M E G N+ TYN+LI G +
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++ + +++EM G P+ ++S+LI+G
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGF 407
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 223/448 (49%), Gaps = 33/448 (7%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I L A D L+ E+ ++ I+ ++ ++++ Y +GR E K F+
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESG-IEPNVVVYSSLLQGYCKSGRWEDVGKVFVE 210
Query: 140 IEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++ V L+++L + K + ++ +M + PNV T N+LI +
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE-----PNVVTYNVLINCM 265
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG---WV 252
CK+ V+ AI VL +M G+ P++VT+ T++ G +++ A + +++ RG
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVK 324
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T+ ++ G +GR+ A +V ME+ G N VTY ++I + K +A L
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW--- 369
+D+M P S +I C+ +V+ A +L + M D I + H+
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL------STMRDRGIEPELFHYIPL 438
Query: 370 ---LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+C++G + A+ LF+E + ++ Y+T+I G C++ +L A L +V++G+
Sbjct: 439 LVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLT 498
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ TY+++I F K G+ + +L++M G P+ F LI+G +GE+ KV
Sbjct: 499 PDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY---STKGEINKV 555
Query: 487 V----SMATASGSVESDSWNFLLTRIVS 510
+ M T + +++S + L T +V+
Sbjct: 556 LELIREMITKNIALDSKIISTLSTSLVA 583
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL---RKNCMPDNAIS 363
GEA +LLD + V + V+ LC G + A L + + C P NA+S
Sbjct: 62 GEATSLLDAL---PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRP-NAVS 117
Query: 364 STII-HWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMV 421
T++ LC + +A L + + ++TY TLI G+C++AE+ +A L +M
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
E G+EPNV Y+ L+QG+CK G ++ ++ EM +KG P+ ++ LI+ L + G
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 482 EVGKVVSMATASG 494
+ V+ M G
Sbjct: 238 KAHGVMDMMVRRG 250
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 200/450 (44%), Gaps = 83/450 (18%)
Query: 110 IKCGENLFITVIRNYGLAG-----RPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNK 163
+K G +L TVI L G R + A LR + +F +V S N LL L K
Sbjct: 119 LKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEK 178
Query: 164 R----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
R +L+H+M + PNV T +I LCK V+ A V M G+ PN
Sbjct: 179 RAEEALELMHMMADDGDGSH--TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPN 236
Query: 220 LVTHTTILGGYV----WR-------------------------------GDIENAKRVFG 244
T+T ++ GY+ W+ G A+ +F
Sbjct: 237 NHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFD 296
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
++ +G P T Y +L+ GY G L++ +D M NGV P+ + +M A+ K
Sbjct: 297 SLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKA 356
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
EA ++ D M Q+ P +ID LC+ G+V+DA + +++ + PD + S
Sbjct: 357 MIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFS 416
Query: 365 TIIH-------W----------------------------LCKEGKIWEAKKLFDEFERG 389
++++ W LC+EG++ EA++L D R
Sbjct: 417 SLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRV 476
Query: 390 SI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
+ P +++YNTL+ G C + + EA +L D MV G++P+ FTYN L+ G+CK +
Sbjct: 477 DVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDA 536
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ EML KG P +++ ++ GL++ G
Sbjct: 537 YSLFREMLMKGLTPGVVTYNTILHGLFQIG 566
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 172/345 (49%), Gaps = 2/345 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N + NA + D +F R ++ + P V LI ALCK V+ A+ ++M
Sbjct: 345 FNIMFNAYAKKAMIDEAMHIFDKMRQQW-LSPGVVNYGALIDALCKLGRVDDAVLKFNQM 403
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ G+ P++ ++++ G E A+++F ++LD+G +A + +LM + GR+
Sbjct: 404 INEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRV 463
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+A +++D M V P+ ++Y +++ C + EA LLD M+ P +
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL 523
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGS 390
+ C+ +++DA L++ +L K P +TI+H L + G+ EAK+L+ +
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRR 583
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ TY ++ G+C + + EA +++ + K ++ ++FT N++I K G ++ +
Sbjct: 584 KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMD 643
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
+ + G P+ ++ L+ E L + G+ E+ ++ S +G+
Sbjct: 644 LFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGT 688
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 200/425 (47%), Gaps = 28/425 (6%)
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
LL L +N N+F ++IR +P + + L + + + ++ +++ L+ +
Sbjct: 278 LLDYLCKNGRCTEARNIFDSLIRK---GIKPHVTIYGIL-LHGYATEGALSEMHSFLDLM 333
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
V+N V P+ NI+ A KK ++ A+ + D+M + P
Sbjct: 334 VRNG-----------------VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPG 376
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+V + ++ G +++A F +++ G PD ++ L+ G + + A K+
Sbjct: 377 VVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFF 436
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
E+ D G+ N + +++ C+ + EA+ L+D ML+ P ++D C G
Sbjct: 437 EVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTG 496
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYN 398
++++A +L ++ PD +T++H CK +I +A LF E +G P ++TYN
Sbjct: 497 RIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYN 556
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
T++ G+ + EA L+ +M+ + +++TY +++ G C+ E ++ + + K
Sbjct: 557 TILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSDLDSGAG 517
+ + +++I L + G + + + + +A G V + +++ + ++ + G
Sbjct: 617 DLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKE-----G 671
Query: 518 ALDEL 522
+L+EL
Sbjct: 672 SLEEL 676
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 194/428 (45%), Gaps = 4/428 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y ++H A A + S L + +N + ++F + Y + A+ F ++
Sbjct: 310 YGILLHGYATEGALSEMHSFLDLMVRNG-VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKM 368
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ + V + L++AL + R D L F N V P++F + L+ LC D
Sbjct: 369 RQQWLSPGVVNYGALIDALCKLGRVDDAVLKF-NQMINEGVTPDIFVFSSLVYGLCTVDK 427
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
E A ++ E+ G+ N ++ G + A+R+ +L PD +Y
Sbjct: 428 WEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNT 487
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+DG+ GR+ +A K++D M G++P+E TY ++ +CK ++ +A +L +ML +
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKG 547
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P ++ L + G+ +A EL+ ++ D + I++ LC+ + EA
Sbjct: 548 LTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAF 607
Query: 381 KLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K+F + + T N +I + + +A L+ + G+ P+V TY ++ +
Sbjct: 608 KMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENL 667
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVES 498
K G+ +E + M + G PN + L+ L G+ G G +S + + S+E+
Sbjct: 668 IKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEA 727
Query: 499 DSWNFLLT 506
+ + L++
Sbjct: 728 STTSMLIS 735
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 6/267 (2%)
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT-YTVLMDGYIKLGRL 271
S+ + P+ T+T ++G + G +++ FG IL GW + T + L+ G R+
Sbjct: 85 SVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRV 144
Query: 272 TDAVKV-MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR---KYVPSSAL 327
+A + + M + G N ++Y ++++ C K++ EA L+ M + P+
Sbjct: 145 DEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVT 204
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
VID LC+ V+ A +++ ++ K P+N + +IH GK E ++ E
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS 264
Query: 388 -RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
G P + Y L+ +C++ TEA ++D ++ KG++P+V Y +L+ G+ G
Sbjct: 265 THGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS 324
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEG 473
E L+ M+ G P+ F+++
Sbjct: 325 EMHSFLDLMVRNGVSPDHHIFNIMFNA 351
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 51/292 (17%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-------GWVP 253
++ A+++ DEM + ++ T +L V R +A + + +R P
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLT-VVSRARCSSASELVVSLFNRMIRECSVKVAP 90
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNL 312
+ TYT+L+ + ++GRL + G N V +G +++ C K+ EA ++
Sbjct: 91 SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDI 150
Query: 313 LDDMLQRKYVPSSALCCKVIDL------LCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
L L+R +P VI LC E + E+A EL
Sbjct: 151 L---LRR--MPEFGCTLNVISYNILLKGLCNEKRAEEALEL------------------- 186
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+H + +G + P+++TY T+I G+C++ + A ++ M++KGV
Sbjct: 187 MHMMADDG------------DGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVR 234
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
PN TY LI G+ G KE +++L+EM G P+ +++L++ L ++G
Sbjct: 235 PNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNG 286
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 148/340 (43%), Gaps = 10/340 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+ S+++ L ++ E L E+ + I+ F ++ N GR A +
Sbjct: 414 VFSSLVYGLCTVDKWEKAEKLFFEV-LDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDL 472
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + +V+ V S NTL++ R D L+ +M + P+ FT N L+
Sbjct: 473 MLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS-----IGLKPDEFTYNTLLHGY 527
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK ++ A + EM G+ P +VT+ TIL G G AK ++ ++++ D
Sbjct: 528 CKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDI 587
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT++++G + + +A K+ + ++ + T +MI A KG + +A +L
Sbjct: 588 YTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFAT 647
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
+ VP + + L +EG +E+ EL+ + P++ + + ++ WL G
Sbjct: 648 ISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGD 707
Query: 376 IWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
I A + + + + +++ + AE + +
Sbjct: 708 IGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAK 747
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++H +AR D SL E+ + G + T++ GR A + +L
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKG-LTPGVVTYNTILHGLFQIGRFCEAKELYLN 577
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + +LN L +N D MF++ K + ++FT NI+I AL K
Sbjct: 578 MINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK-DLQLDIFTINIMIGALLKGG 636
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
E A+ + + + G+VP++ T+ I + G +E +F + + G P++
Sbjct: 637 RKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLN 696
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
L+ + G + A + ++++ T ++I + + + A++L
Sbjct: 697 ALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 191/395 (48%), Gaps = 34/395 (8%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ VI + + R + A + LR++ V + N L+ +L + DL L +
Sbjct: 149 YNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLA-LKVMDQL 207
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ P V T ILI+A ++ A+R+LDEM S G+ P++ T+ I+ G RG +
Sbjct: 208 LEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLV 267
Query: 237 ENA--------------------------------KRVFGDILDRGWVPDATTYTVLMDG 264
+ A +R+ D++ +G P+ TY+VL+
Sbjct: 268 DRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISS 327
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
+ G+ +AV V+ M++ G+ P+ Y +I AFCK K A +DDM+ ++P
Sbjct: 328 LCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPD 387
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG-KIWEAKKLF 383
++ LC++G+ ++A ++K+L C P+ + +T+ L G KI +
Sbjct: 388 IVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMIL 447
Query: 384 DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ G P +TYN+LI+ +C + EA L DM +P V +YN+++ G CK
Sbjct: 448 EMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAH 507
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ I +L M+D GC PN+T+++LL+EG+ +G
Sbjct: 508 RIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAG 542
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 173/345 (50%), Gaps = 9/345 (2%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ F N +I C+ D + A RV+ M G P++VT+ ++G RG ++ A +V
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+L+ P TYT+L++ I G + DA++++DEM G++P+ TY V++ CK
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
A + ++ PS L ++ L EG+ E L ++ K C P+
Sbjct: 264 RGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVT 320
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I LC++GK EA + E+G P Y+ LI+ C+ ++ A DDM+
Sbjct: 321 YSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMI 380
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G P++ YN ++ CK G A E + I +++ + GC PN +S++ + L+ SG++
Sbjct: 381 SAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKI 440
Query: 482 EVGKVVSMATASGSVESD--SWNFLLTRIVSD--LDSGAGALDEL 522
++ + S V+ D ++N L++ + D +D G L ++
Sbjct: 441 RALTMI-LEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDM 484
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 130/304 (42%), Gaps = 35/304 (11%)
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
H L G A ++ RG+ PD T L+ G R AV+VM+ +E
Sbjct: 80 HMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILE 139
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G +P+ Y +I FC+ + A ++ M R + P +I LC GK++
Sbjct: 140 QYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLD 198
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLI 401
A ++ +LL NC P + +I G I +A +L DE RG P + TYN ++
Sbjct: 199 LALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIV 258
Query: 402 AGMCESAELT-------------------------------EAG-RLWDDMVEKGVEPNV 429
GMC+ + EAG RL DM+ KG EPN+
Sbjct: 259 RGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNI 318
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVS 488
TY++LI C+ G A E + +L M +KG P+ + LI + G + +G V
Sbjct: 319 VTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDD 378
Query: 489 MATA 492
M +A
Sbjct: 379 MISA 382
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK K EA L+ M++R Y P LC K+I L + E A + + +L + PD
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVME-ILEQYGDPD 145
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ + +I C+ + A ++ + RG P ++TYN LI +C +L A ++ D
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++E P V TY +LI+ G+ + +R+L+EM+ +G P+ ++++++ G+ + G
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265
Query: 479 NEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
+ VS + S+ + ++G + +++VK C
Sbjct: 266 LVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGC 314
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
K ++ LC+ GK +A ++++++ PD + + +I L + +A ++ + E+
Sbjct: 82 KALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQY 141
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P YN +I+G C S A R+ M +G P+V TYN+LI C G +
Sbjct: 142 GDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLAL 201
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
++++++L+ C P ++++LIE G+ + +++ + G ++ D + +
Sbjct: 202 KVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRG-LQPDMYTY 254
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 205/466 (43%), Gaps = 85/466 (18%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F ++ + AGR + AV+ F R+ F+ + + N + LV ++ L+ L N
Sbjct: 147 FRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLV-DRGVILLALALYNRM 205
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+PN T +L+ LCK+ A+++ DEM G+VP++ +T +L G I
Sbjct: 206 VSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRI 265
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG----------- 285
E+A R+ + + G PD TYTV + G K GR+ +A + ++D G
Sbjct: 266 EDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCL 325
Query: 286 ------------------------VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ P+ Y ++I F + ++ +A LLD+M + +
Sbjct: 326 IDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGF 385
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
VP + ++ L + G ++ A L +L+ N + D+ + +I LCK+G I +A +
Sbjct: 386 VPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQ 445
Query: 382 LFDEF-ERGSIPSLLTYNTLIAG------------------------------------- 403
+FDE E G P+++TYN LI G
Sbjct: 446 VFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVR 505
Query: 404 -----------MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
MC+S ++ +A +L ++E GV P+V TYN LI G CK N +R+
Sbjct: 506 DTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLF 565
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+E+ KG P++ ++ LI+GL+ + E + + SG S
Sbjct: 566 KELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPS 611
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 176/381 (46%), Gaps = 35/381 (9%)
Query: 100 LLTELKQN--PEIKCGENLFITVIRNYGL--AGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL +K+N P + +F++ GL AGR + A F ++ + + L
Sbjct: 271 LLCSMKENGCPPDEVTYTVFLS-----GLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCL 325
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ L Q R+D L + + P++ ILI+ + + A +LDEM G
Sbjct: 326 IDGLFQAGRFD-EGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKG 384
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
VP+ + T+L G+I+ A+ + ++L V D+TT+ +++ G K G + A+
Sbjct: 385 FVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAM 444
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+V DEM ++G P +TY +I+ + EAR L M
Sbjct: 445 QVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM------------------- 485
Query: 336 CEEGKVEDACELWKRL-LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPS 393
++ + L+ RL L N + D ++ +C+ G++ +A KL E G +P
Sbjct: 486 ----EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPD 541
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYNTLI G+C++ L A RL+ ++ KG+ P+ TY LI G + + + +
Sbjct: 542 VVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601
Query: 454 EMLDKGCFPNKTSFSLLIEGL 474
+L G FP+ ++ ++ L
Sbjct: 602 NILRSGGFPSLPIYNTMMRSL 622
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 184/438 (42%), Gaps = 72/438 (16%)
Query: 81 YHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
Y +I L +A FD S TE+ +P+I L+ +IR + AGR + A
Sbjct: 322 YSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDI----TLYTILIRRFAEAGRTKDAFLLL 377
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ NTLL AL ++ L+ M +N+ VV + T NI+I
Sbjct: 378 DEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN-----VVLDSTTHNIMIC 432
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD-------- 245
LCKK ++ A++V DEM G P ++T+ ++ G G +E A+ +F
Sbjct: 433 GLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPS 492
Query: 246 ----------------------------------------ILDRGWVPDATTYTVLMDGY 265
I++ G VPD TY L++G
Sbjct: 493 LFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGL 552
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K L A+++ E++ G+ P+E+TYG +I+ + + +A L ++L+ PS
Sbjct: 553 CKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSL 612
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ ++ LC K+ A LW L K N P++ + + ++G + E K
Sbjct: 613 PIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCF-EDGFLDETVKEL 671
Query: 384 DEFER--GSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+ ++ GS+ P+ Y + G+C+ ++ +A R++ + E G+ +LI C
Sbjct: 672 IKIDQVYGSLNPN--PYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLC 729
Query: 441 KIGNAKEGIRILEEMLDK 458
N + I+ L K
Sbjct: 730 WDRNLNAAVDIMMYTLSK 747
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 153/372 (41%), Gaps = 82/372 (22%)
Query: 57 LDLALQIFHYAGKF--HPNFSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKC 112
+D A+Q+F G+ HP TY+++I L RA + L E+ NP +
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVM----TYNALIDGLYRAGMLEEARMLFHKMEMGNNPSL-- 493
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIE-KFNVQRSVRSLNTLLNALVQN----KRYDL 167
FLR+ N R SL L++ + Q+ K Y L
Sbjct: 494 ------------------------FLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKL 529
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ + ++ VVP+V T N LI LCK +++GA+R+ E+ G+ P+ +T+ T++
Sbjct: 530 LRGIIESG-----VVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584
Query: 228 GGYVWRGDIEN-AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV--------- 277
G +WR EN A +F +IL G P Y +M ++ +L+ A+ +
Sbjct: 585 DG-LWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKY 643
Query: 278 --------------------MDEMEDNGVEPNEV-------TYGVMIEAFCKGKKSGEAR 310
+DE ++ ++V Y + + C+ +K +A
Sbjct: 644 NLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDAL 703
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ + + V + A C +I+ LC + + A ++ L K + + + ++ L
Sbjct: 704 RIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSL 763
Query: 371 CKEGKIWEAKKL 382
C + +A+ L
Sbjct: 764 CIRYRRHDAQAL 775
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 161/306 (52%), Gaps = 1/306 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T +++ LCK ++ A+ ++EM + G+ P+ + +L G +E A+ +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ + P+ TY L++G K R+ A ++ EM G P EV+Y +I+ FCK
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K A+++ D M++ VP+ +ID L + GKV+ A E+ +++K P+ A
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
S +I CK ++ EA KL ++ +G P+++TYN L+ +C + +L +A +L+ M
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
++ P V TYN L++ C R+ EM+ KGC P+ ++ L GL +G
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306
Query: 482 EVGKVV 487
E +++
Sbjct: 307 EAQELM 312
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 147/269 (54%), Gaps = 2/269 (0%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N +L+ L Q ++ + L+F+ K ++ PNV T N LI LCK +E A + EM
Sbjct: 48 NFVLSGLCQEEKVEEARLLFEKMV-KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMA 106
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G VP V++ T++ G+ + D+ AK VF ++ VP+ TYT L+DG K G++
Sbjct: 107 GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQ 166
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A +V+D M GV PN TY +I+ FCK ++ EA LL+ M+ + P+ ++
Sbjct: 167 AAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILL 226
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSI 391
+ LC K+EDA +L++ + ++ C P +T++ LC ++ A +L+ E +G
Sbjct: 227 NSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCP 286
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDM 420
P +TY+TL G+ + ++ EA L + M
Sbjct: 287 PDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 152/278 (54%), Gaps = 5/278 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY--VWRGDIEN 238
+ P+ F N ++ LC+++ VE A + ++M + PN+VT+ T++ G WR IE
Sbjct: 40 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR--IET 97
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F ++ +G+VP +Y L+DG+ K L A V D+M + PN VTY +I+
Sbjct: 98 AYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLID 157
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K K A +LD M+++ P+ A +ID C+ +V++A +L ++++ + P
Sbjct: 158 GLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAP 217
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ +++ LC+ K+ +A KLF +R P+++TYNTL+ +C +L A RL+
Sbjct: 218 TVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLY 277
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+M+ KG P+ TY+ L G + G E ++E+M
Sbjct: 278 AEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I+ +L + + D + + E+ IK ++ V+ + E A F +
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEMATR-GIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 69
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ K + +V + NTL+N L + R + + +FK K VP + N LI CKK
Sbjct: 70 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGFCKKK 128
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ A V D+M VPN+VT+TT++ G G ++ A V ++ +G P+ TY+
Sbjct: 129 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYS 188
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG+ K+ R+ +A K++++M G+ P VTY +++ + C+ K +A L M QR
Sbjct: 189 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 248
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P+ ++ LC +++ A L+ ++ K C PD T+ L + GK+ EA
Sbjct: 249 RCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEA 308
Query: 380 KKLFDEFE 387
++L ++ +
Sbjct: 309 QELMEKMK 316
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 122/223 (54%), Gaps = 2/223 (0%)
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ +TYG ++E CK K+ +A +++M R P + + V+ LC+E KVE+A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCE 406
+++++++ P+ +T+I+ LCK +I A +LF E +G +P+ ++YNTLI G C+
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+L A ++D MV PNV TY LI G K G + +L+ M+ KG PN +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 467 FSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRI 508
+S LI+G + E K++ G + ++N LL +
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 229
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+++I+ L +A + L E+ + E + T+I + A
Sbjct: 78 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT-EVSYNTLIDGFCKKKDLVAAKDV 136
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++ + N +V + TL++ L ++ + + K V PNV T + LI C
Sbjct: 137 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GVTPNVATYSCLIDGFC 195
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V+ A ++L++M + G+ P +VT+ +L +E+A ++F + R P
Sbjct: 196 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 255
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ +L A ++ EM G P+ +TY + + K EA+ L++ M
Sbjct: 256 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Query: 317 LQRKYVP 323
K P
Sbjct: 316 KLTKRNP 322
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 220/449 (48%), Gaps = 14/449 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE-LKQNPEIKCGENLFITVIRNYGL--AGRPELAVKT 136
T+++++H L + +LL + LK+ + N F I GL GR E AV
Sbjct: 117 TFNNVLHALCQKGDIMESGALLAKVLKRGMSV----NKFTCNIWIRGLCEGGRLEEAVAL 172
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
++ + + V + NTL+ L ++ + + ++ +P+ FT N +I C
Sbjct: 173 VESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ-GCIPDDFTYNTIIDGYC 230
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+D ++ A +L + G VP+ VT+ +++ G GD+E A +F + + PD
Sbjct: 231 KRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLV 290
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y L+ G + G + A++VM+EM ++G P+ TY ++I CK +A +++D
Sbjct: 291 VYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDA 350
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ + Y+P +ID C+ K++ A +L +R+ PD +++++ LCK GK
Sbjct: 351 IVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKA 410
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
E + F+E +G P+ +TYN LI C+ +L EA + M + G+ P+ ++N L
Sbjct: 411 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTL 470
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS 495
I GFC+ G+ + +++ +KG +F++LI G Y S ++ + + S
Sbjct: 471 IHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI-GAYSSKLNMQMAEKIFGEMISKG 529
Query: 496 VESDSWNFLLTRIVSDLDSGAGALDELLV 524
+ D + + R++ D A +D V
Sbjct: 530 YKPDLYTY---RVLVDGSCKAANVDRAYV 555
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 177/344 (51%), Gaps = 2/344 (0%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
+L+N L + +F ++ K + P++ N L+K LC++ + A++V++EM
Sbjct: 259 SLINGLCAEGDVERALELFNEAQAK-DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE 317
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P++ T+ ++ G G+I +A V D + +G++PD T+ ++DGY K +L
Sbjct: 318 DGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDS 377
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+++++ M G+ P+ +TY ++ CK K+ E ++M+ + P++ +I+
Sbjct: 378 ALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIE 437
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
C+ ++E+A + R+ + +PD +T+IH C+ G + A LF + E+G
Sbjct: 438 NFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSA 497
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ T+N LI + A +++ +M+ KG +P+++TY +L+ G CK N L
Sbjct: 498 TADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHL 557
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
EM+ KG P+ +F ++ L + E ++ + G V
Sbjct: 558 AEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVV 601
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 197/453 (43%), Gaps = 74/453 (16%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ F + + N +++ALV +D H ++ V P+ T + IK+ C
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSA-GVAPDARTHTVRIKSFCITG 59
Query: 200 DVEGAIRVLDEMPSMG-----------------------------------MVPNLVTHT 224
A+R+L +P G + P++ T
Sbjct: 60 RPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119
Query: 225 TILGGYVWRGDIENAKRVFGDILDRG----------WV---------------------- 252
+L +GDI + + +L RG W+
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY 179
Query: 253 --PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD TY LM G K ++ +A + + M + G P++ TY +I+ +CK EA
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL D + + +VP C +I+ LC EG VE A EL+ K+ PD + ++++ L
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C++G I A ++ +E E G P + TYN +I G+C+ +++A + +D + KG P+V
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
FT+N +I G+CK ++++E M G P+ +++ ++ GL ++G EV +
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419
Query: 490 ATASGS-VESDSWNFLLTRI--VSDLDSGAGAL 519
G + ++N L+ ++ L+ +G +
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVI 452
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 6/301 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F T+I Y + + A++ R+ + + + N++LN L + + V+ F+
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K PN T NILI+ CK + +E A V+ M G+VP+ ++ T++ G+ GD+
Sbjct: 422 LK-GCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A +F + ++G+ A T+ +L+ Y + A K+ EM G +P+ TY V+
Sbjct: 481 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVL 540
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
++ CK A L +M+ + +VPS A +V++ L +V +A + ++R
Sbjct: 541 VDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGV 600
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
+P+ + TI+ KE I K L +E + S TY L G+ ++ +LT R
Sbjct: 601 VPE--VVDTILSTDKKE--IAAPKILVEELMKKGHISYPTYEVLHEGVRDN-KLTRKARK 655
Query: 417 W 417
W
Sbjct: 656 W 656
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 147/297 (49%), Gaps = 6/297 (2%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
+P+VFT N +I CK+ ++ A+++++ M G+ P+ +T+ ++L G G +
Sbjct: 356 LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
F +++ +G P+A TY +L++ + K+ +L +A V+ M +G+ P+ +++ +I FC
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFC 475
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
+ A L + ++ Y ++ +I + ++ A +++ ++ K PD
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 535
Query: 362 ISSTIIHWLCKEGKIWEAK-KLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
++ CK + A L + +G +PS+ T+ ++ + + ++EA + M
Sbjct: 536 TYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM 595
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
V GV P V +L +I K ++EE++ KG T + +L EG+ ++
Sbjct: 596 VRMGVVPEVVD-TILSTDKKEIAAPK---ILVEELMKKGHISYPT-YEVLHEGVRDN 647
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P++ ++D L + A +++ R+L PD + I C G+ A +L
Sbjct: 8 PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
ERG L Y T++ G+ +A L+D+M+ + V P+V T+N ++ C+
Sbjct: 68 LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
G+ E +L ++L +G NK + ++ I GL E G E +V A + + ++
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTY 187
Query: 502 NFLLTRIVSD--LDSGAGALDELLVKNC 527
N L+ + D + A L ++ + C
Sbjct: 188 NTLMRGLCKDSKVQEAAQYLRRMMNQGC 215
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 187/351 (53%), Gaps = 6/351 (1%)
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
R+ N ++N L + + + + K R V P++ T + +I CK+ +++ A +L
Sbjct: 10 RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69
Query: 210 EMPSM-GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
EM + GM P++VT+T+++ G G ++ A + ++ +G PD T++ L+ G+
Sbjct: 70 EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK---YVPSS 325
++ +A+K+ E+ + + V+ +I C+ ++ GEA L +M R+ + P
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ID C+ G +E A ++ + + C+P+ S+++H LCK G + +A LF
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 386 F-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+G +P+++TY TLI G+C + ++ A L D+M + +YN L+ G+C++G
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASG 494
+E ++ +EM K C P++ +++ L+ G + E ++ +M TA+G
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 211/464 (45%), Gaps = 43/464 (9%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+Q +D A +I + + TY S++ L R D ++ E+K ++
Sbjct: 57 KQGEMDRACEILREMVT-RDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG-VEP 114
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
+ F +I + A + + A+K + I + + S + L+ L + +R + +F
Sbjct: 115 DKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF 174
Query: 173 KNS--RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ R P+V T LI CK ++E A+++L M VPN+VT++++L G
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYT------------------------------- 259
GD++ A +F + +G VP+ TYT
Sbjct: 235 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADT 294
Query: 260 ----VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
L+DGY +LGR+ +A ++ EM P+ +TY ++ FC + EAR LL++
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 316 MLQRKYV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + P V+ + +A E + ++ +N P+ S++I LCK G
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 375 KIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
++ A ++ ++ P ++TY +I G+C + EA L ++MV K VEP+V T+N
Sbjct: 415 RVNHAMEVLKNVDK---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNS 471
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+I C++G+ E ++L M G P +++ L+EG +G
Sbjct: 472 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 515
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 199/409 (48%), Gaps = 9/409 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY+ +++ L +AR +L E++ + + TVI + G + A +
Sbjct: 8 NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 67
Query: 137 FLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + + V + ++++ L ++ + D M + + K V P+ FT + LI
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK-GVEPDKFTFSALITGW 126
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI---LDRGWV 252
C V+ A+++ E+ + + V+ + ++ G I A +F ++ D W
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TYT L+DG+ K G L A+K++ ME PN VTY ++ CK +A +L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLC 371
M + VP+ +I LC KV DA L + C P + +S + ++ C
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKV-DAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 372 KEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDM-VEKGVEPNV 429
+ G+I EAK+LF E S +P +TY L+ G C ++ L EA L ++M G++P+V
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
TY++++ G+ + E ++EM+ + PN ++S LI+GL ++G
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 152/300 (50%), Gaps = 41/300 (13%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENA 239
V PN T N+++ LCK A VL EM + P+LVT++T++ G+ +G+++ A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 240 KRVFGDILDR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+ +++ R G PD TYT ++DG + G++ A +++ EM+ GVEP++ T+ +I
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C +K V++A +L+K +L +C
Sbjct: 125 GWCNARK-----------------------------------VDEALKLYKEILTSSCRL 149
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGS----IPSLLTYNTLIAGMCESAELTEAG 414
D SS +I LC+E +I EA +LF E E P ++TY LI G C+S L +A
Sbjct: 150 DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAM 209
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ M + PNV TY+ L+ G CK G+ + + + M KGC PN +++ LI GL
Sbjct: 210 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGL 269
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 224/502 (44%), Gaps = 53/502 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ + +D AL++ Y + + + ++I L R R
Sbjct: 114 PDKFTFSALITGWCNARKVDEALKL--YKEILTSSCRLDAVSSSALITGLCRERRIGEAY 171
Query: 99 SLLTEL--KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
L E+ +++ K + +I + +G E A+K +E +V + ++LL
Sbjct: 172 ELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLL 231
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L + D +F+ K VPNV T LI LC V+ A ++DEM +
Sbjct: 232 HGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 290
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+ V++ +L GY G IE AK++F ++ + +PD TYT L+ G+ RL +A
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350
Query: 277 VMDEMEDN-GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+++ M+ G++P+ VTY +++ + + K+ EA + +M+ R P++ +ID L
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C+ G+V A E+ K + + PD + +I LC + EA L +E + PS+
Sbjct: 411 CKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSV 466
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY---------------------- 432
T+N++I +C ++ EA +L M G+EP + TY
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 526
Query: 433 --------------------NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
+ LI+G CK + + ++EE+ + C P + +++
Sbjct: 527 MRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVD 586
Query: 473 GLYESGNEGEVGKVVSMATASG 494
GL +G E GK+++ + G
Sbjct: 587 GLLRAGRTEEAGKLINSISKVG 608
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 195/428 (45%), Gaps = 46/428 (10%)
Query: 92 RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRS- 148
R DA++ L++ P + C N F I GL R + A+ + + +
Sbjct: 146 RTSDAMD---IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGC 202
Query: 149 ---VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
V S T++N L++ + D + +F + + PN T N L+ C + AI
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQ-GMSPNCITYNCLLHGYCSSGKPKEAI 261
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+ +M G+ P++VT+ T++ G A++VF ++ +G PD++ Y L+ GY
Sbjct: 262 GIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGY 321
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
G L +++D M NG +P+ + ++I A+ K EA M Q+ P+
Sbjct: 322 ATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNI 381
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH-------W--------- 369
V+D LC GKV+DA + RL+ + P+ + T+IH W
Sbjct: 382 VTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVE 441
Query: 370 -------------------LCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAE 409
LCKEG + AK +FD R + ++TY TLI G C +
Sbjct: 442 MIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGK 501
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ EA +L + MV GV+PN TYN +I G+CK G ++ + +M KG P +S
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYST 561
Query: 470 LIEGLYES 477
++ GL+++
Sbjct: 562 ILHGLFQT 569
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 179/357 (50%), Gaps = 5/357 (1%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AG +LA R+ + + + LL L +KR + PN F
Sbjct: 109 AGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAF 168
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPS----MGMVPNLVTHTTILGGYVWRGDIENAKRV 242
+ NIL+K LC ++ + A+ +L M + G P++V++TT++ G + G ++ A +
Sbjct: 169 SYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCL 228
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++LD+G P+ TY L+ GY G+ +A+ + +M +GVEP+ VTY ++ CK
Sbjct: 229 FDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCK 288
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+S EAR + D M+++ + P S++ ++ EG + +L ++R PD+ I
Sbjct: 289 NGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYI 348
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I K G + EA F + ++G P+++TY T++ +C ++ +A +D ++
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G+ PN + LI G C + + EM+ +G PN F+ L+ L + G
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEG 465
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 161/328 (49%), Gaps = 2/328 (0%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L+ A ++ D L F R + + PN+ T ++ ALC+ V+ A+ D +
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQ-GLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
S G+ PN V T++ G + A+ + +++ RG P+ + L++ K G +
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
T A + D M V+ + +TY +I+ +C K EA LL+ M+ P+ +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
I+ C+ G++EDAC L++++ K P I STI+H L + +I AK+L+ + I
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587
Query: 392 P-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ TYN ++ G+C++ +A R++ ++ T+N++I K G E
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKD 647
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +L +G PN ++ L+++ L E G
Sbjct: 648 LFASLLARGLVPNVVTYWLMMKSLIEQG 675
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 39/322 (12%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
++F N + A+ ++ A+ + + MP +L T++ ++G G ++ A
Sbjct: 65 SIFDLNSALSAVARESPAV-ALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAAL 119
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV-MDEMEDNGVEPNEVTYGVMIEAFCK 302
G ++ GW A T++ L+ G R +DA+ + + M G PN +Y ++++ C
Sbjct: 120 GRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCD 179
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+S +A +LL M+ +D R C PD
Sbjct: 180 ENRSQQALHLLHTMM-----------------------ADDT--------RGGCPPDVVS 208
Query: 363 SSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ L +EG++ +A LFDE ++G P+ +TYN L+ G C S + EA ++ M
Sbjct: 209 YTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMC 268
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
GVEP+V TYN L+ CK G + E ++ + M+ KG P+ + + L+ G G
Sbjct: 269 RDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLV 328
Query: 482 EVGKVVSMATASGSVESDSWNF 503
++ +++ + +G+ + D + F
Sbjct: 329 QMHQLLDVMVRNGT-QPDHYIF 349
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 13/275 (4%)
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
+A +F ++L R D T+ L + R + AV + + + + TY ++I
Sbjct: 50 HAHHLFDELLRR----DTTSIFDLNSALSAVARESPAVAL--SLFNRMPRADLCTYSIVI 103
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL-WKRLLRKNC 356
+ A L +++ + + ++ LC + + DA ++ +R+ C
Sbjct: 104 GCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGC 163
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLF-----DEFERGSIPSLLTYNTLIAGMCESAELT 411
P+ + ++ LC E + +A L D+ G P +++Y T+I G+ +L
Sbjct: 164 TPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLD 223
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+A L+D+M+++G+ PN TYN L+ G+C G KE I I +M G P+ +++ L+
Sbjct: 224 KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM 283
Query: 472 EGLYESGNEGEVGKVV-SMATASGSVESDSWNFLL 505
L ++G E KV SM +S + LL
Sbjct: 284 VYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLL 318
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 10/303 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNY----GLAGRPELAVKT 136
+ ++IH L +D E L E+ C +F + N+ G+ R +
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRG--ICPNTIFFNTLLNHLCKEGMVTRAKNIFDL 476
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+R++ VQ V + TL++ + + D + + V PN T N +I C
Sbjct: 477 MVRVD---VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD-GVKPNEVTYNTIINGYC 532
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K +E A + +M S G+ P +V ++TIL G I AK ++ ++ G
Sbjct: 533 KNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIG 592
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +++ G + DA+++ + T+ +MI+A KG + EA++L +
Sbjct: 593 TYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASL 652
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L R VP+ ++ L E+G +E+ +L+ L + C D+ + + ++ L ++G++
Sbjct: 653 LARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEV 712
Query: 377 WEA 379
+A
Sbjct: 713 RKA 715
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 10/232 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N TY++II+ + + SL ++ NP I ++ T++ R A
Sbjct: 520 NEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIV----IYSTILHGLFQTRRIAAA 575
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILI 192
+ +L + K ++ + + N +L L QN D MF N F + F NI+I
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTF--NIMI 633
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
AL K + A + + + G+VPN+VT+ ++ + +G +E +F + G
Sbjct: 634 DALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCT 693
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D+ L+ + G + A + ++++N T ++ GK
Sbjct: 694 ADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFLVSSGK 745
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 220/473 (46%), Gaps = 25/473 (5%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSII--HKLARARAFDAVESLLTELKQN--------- 107
LAL+ + K P N+ T+ I H L RAR + +S+L L Q
Sbjct: 34 LALKFLKWVIK-QPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFG 92
Query: 108 ------PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
P +F +IR Y G AV TF + + SV + N ++ ++V+
Sbjct: 93 VLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVK 152
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
N R LV FK +V PNV + NILI LC + ++ A+ +L M G VP +V
Sbjct: 153 NCRAHLVWXFFKQMLTS-RVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIV 211
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
++ T+L +G + A + + +G D TY + +D + R V+ +M
Sbjct: 212 SYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM 271
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ + PNEV+Y +I F K K G A + ++M++ P+ +I+ C G
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE--RGSIPSLLTYNT 399
E+A L + + P+ T+++ L K K A+ + + + R S+ + +++
Sbjct: 332 EEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSL-NCISHTV 390
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+I G+C + L EA +L +M + GV P++ T+++LI GFCK+GN + ++ ++ +G
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREG 450
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDL 512
PN FS LI + GN E K + +G ++ NF +V+ L
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNG---QNADNFTCNSLVASL 500
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 203/431 (47%), Gaps = 41/431 (9%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
N+ I+V+ + G+ + AV +E+ ++ S NTLL+ + R+ ++ +
Sbjct: 179 NILISVL---CVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
K + +V T N+ I +LC+ VL +M + + PN V++ T++ G+V G
Sbjct: 236 MECK-GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEG 294
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
I A RVF ++++ P+ TY +L++GY G +A++++D ME N V PNEVT G
Sbjct: 295 KIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIG 354
Query: 295 -----------------------------------VMIEAFCKGKKSGEARNLLDDMLQR 319
VMI+ C+ EA LL +M +
Sbjct: 355 TLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKD 414
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I+ C+ G + A E+ ++ R+ +P+N I ST+I+ CK G ++E
Sbjct: 415 GVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEG 474
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K + G T N+L+A +CE+ +L EA + G+ PN T++ +I G
Sbjct: 475 MKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING 534
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVE 497
+ +G+ + ++M+ G P+ ++ L++ L + N E K++ + +V+
Sbjct: 535 YANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVD 594
Query: 498 SDSWNFLLTRI 508
+ S+N L+ I
Sbjct: 595 TISYNTLIVEI 605
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 7/334 (2%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FTCN L+ +LC+ + A L + +G+VPN VT I+ GY GD A VF
Sbjct: 491 FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDK 550
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ G P TY L+ K +A K++ ++ + + ++Y +I K
Sbjct: 551 MISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGN 610
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M+Q +P S ++ L EG++ A RL++K + N+I T
Sbjct: 611 LLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYT 670
Query: 366 -IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
I L K G+ A LF E E+G L+ N++ G ++ A L K
Sbjct: 671 CFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNK 730
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
V PN+ T+N+L+ G+ + + ++ M G FPN+ ++ LI GL G E+
Sbjct: 731 NVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGML-EL 789
Query: 484 G-KVVSMATASGSVESD-SWNFLLTRI--VSDLD 513
G K++ M A S D ++N L+ + ++DLD
Sbjct: 790 GIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 221/488 (45%), Gaps = 60/488 (12%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ ++ + +A ++F+ + N S N TY+ +I+ F+
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIEL--NLSPNLITYNILINGYCINGNFEEAL 335
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN----- 153
LL ++ N +++ E T++ + + ++A +E++++ R+ SLN
Sbjct: 336 RLLDVMEAN-DVRPNEVTIGTLLNGLYKSAKFDVARNI---LERYSINRT--SLNCISHT 389
Query: 154 TLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+++ L +N + + L+ M K+ V P++ T ++LI CK ++ A V+
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDG-----VYPDIITFSVLINGFCKVGNLNKAKEVMS 444
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDI------------------------------ENA 239
++ G VPN V +T++ G++ EN
Sbjct: 445 KIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENG 504
Query: 240 KRV----FGDILDR-GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
K V F + R G VP++ T+ +++GY +G + A V D+M G P+ TYG
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYG 564
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ CKG+ EAR LL + + +I + + G + +A L++ +++
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN 624
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL--LTYNTLIAGMCESAELTE 412
N +PD+ + I+ L +EG++ A + I +L + Y I G+ ++ +
Sbjct: 625 NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKA 684
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A L+ +M EKG+ ++ N + G+ ++G ++ + +K PN T+F++L+
Sbjct: 685 ALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLH 744
Query: 473 GLYESGNE 480
G Y G +
Sbjct: 745 G-YSRGQD 751
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 171/396 (43%), Gaps = 2/396 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I+ L R L L Q + ++ I AG+ + A+ F
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKE 691
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ + + +LN++ + + + + +R+K V+PN+ T NIL+ +
Sbjct: 692 MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNK-NVIPNLTTFNILLHGYSRGQ 750
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ ++ + M G PN +T+ +++ G G +E ++ + D T+
Sbjct: 751 DIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFN 810
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ ++ L + + ME V ++ T + + + S + +ML++
Sbjct: 811 MLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKK 870
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
++P+S C ++ +C G ++ A +L +++ D+A ++ L GKI EA
Sbjct: 871 GFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEA 930
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ R IP+ T+ TL+ C+ EA L M V+ ++ YN+LI
Sbjct: 931 MWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISA 990
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
C G+ + EE+ KG PN T++ +L+ +
Sbjct: 991 CCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 177/422 (41%), Gaps = 38/422 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++ L + + F LL +L P + + T+I +G AV+ F
Sbjct: 562 TYGSLLKVLCKGQNFWEARKLLKKLHCIP-LAVDTISYNTLIVEISKSGNLLEAVRLFEE 620
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN--VFTCNILIKALCK 197
+ + N+ + +L+ L++ R + K + N V+TC I L K
Sbjct: 621 MIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTC--FIDGLFK 678
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A+ + EM G+ +L+ +I GY G + +A + ++ +P+ TT
Sbjct: 679 AGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTT 738
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG-------------- 303
+ +L+ GY + + K+ + M +G PN +TY +I C
Sbjct: 739 FNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFI 798
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC---ELWKRLLRKNCMPDN 360
+S +L +ML RK CC++ DL KV D E+++ L K+
Sbjct: 799 AESSTIDDLTFNMLIRK-------CCEINDL----DKVIDLTHNMEVFRVSLDKD--TQK 845
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
A++ ++ + + ++ ++G IP+ Y T++ MC ++ A +L D M
Sbjct: 846 AVTDVLVRRMVSQNYFVFMHEM---LKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQM 902
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V G+ + +++G G +E + IL+ ML P ++F+ L+ + N
Sbjct: 903 VALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNF 962
Query: 481 GE 482
E
Sbjct: 963 KE 964
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++R L G+ E A+ R+ + + + TL++ + + H + K
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL-KILMEH 974
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG-----YVWR 233
++V ++ N+LI A C DV A+ +E+ G++PN+ T+ ++ YV R
Sbjct: 975 YRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSR 1034
Query: 234 GDIENAKRVFGDILDRGWV 252
G+I V D+ DRG V
Sbjct: 1035 GEI-----VLKDLNDRGLV 1048
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 42/214 (19%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
+ Q++V + L+ +V + +H M K +P ++K +C+ D++G
Sbjct: 842 DTQKAVT--DVLVRRMVSQNYFVFMHEMLKKG-----FIPTSKQYCTMMKRMCRVGDIQG 894
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A ++ D+M ++G+ + ++ G G IE A + +L +P +T+T LM
Sbjct: 895 AFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMH 954
Query: 264 GY--------------------IKL---------------GRLTDAVKVMDEMEDNGVEP 288
+ +KL G + A+ +E++ G+ P
Sbjct: 955 VFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLP 1014
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
N TY V++ A +L D+ R V
Sbjct: 1015 NMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ K +P T L+ CKKD+ + A + M + ++V + ++ GD+
Sbjct: 939 RMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVI 998
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + +I +G +P+ TTY VL+ ++ V+ ++ D G ++
Sbjct: 999 TALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRG----------LV 1048
Query: 298 EAFCKGKKSGEARNLL 313
+ GK R+ +
Sbjct: 1049 SGYLDGKSQKSCRDFV 1064
>gi|115465257|ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|222632454|gb|EEE64586.1| hypothetical protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 176/380 (46%), Gaps = 37/380 (9%)
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
H++ ++++LARAR F V LL L +F VI + G A RP+ AV
Sbjct: 58 HDHPFAACVLYRLARARLFPLVPPLLAALHSR-GAPLRPTVFAAVIDHLGAASRPDAAVG 116
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F + F S + ++LLNALV N R D M + K V N + NI++K
Sbjct: 117 VFRTVPAF-CSHSAATFHSLLNALVSNGRTDAARDMLPLA-PKLGVRLNAVSYNIILKGA 174
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C +D GA VLDEM S G+ P +VT T++G G++ A+R+ ++ RG P+A
Sbjct: 175 CLRDGFMGARGVLDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNA 234
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY +LM G R DA K+M +ME G + + V YGV++ + + + R LL
Sbjct: 235 ATYALLMRGLCDADRHADAEKLMFDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSA 294
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M +RK P A +I LC+ G+ ++A
Sbjct: 295 MRKRKLKPDDASYNILIRCLCDAGRADEA------------------------------- 323
Query: 376 IWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ L + RG++P TY L+ G C + + R+++ M+ G P T+ L
Sbjct: 324 ---HRALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQARTFRHL 380
Query: 436 IQGFCKIGNAKEGIRILEEM 455
+G + G A+E +LE+M
Sbjct: 381 ARGLGEDGKAEEAFFVLEQM 400
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 154/355 (43%), Gaps = 20/355 (5%)
Query: 183 PNVFTCNI-LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT-----TILGGYVWRGDI 236
P VF I + A + D G R VP +H+ ++L V G
Sbjct: 95 PTVFAAVIDHLGAASRPDAAVGVFRT---------VPAFCSHSAATFHSLLNALVSNGRT 145
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A+ + G +A +Y +++ G A V+DEM GV P VT+ +
Sbjct: 146 DAARDMLPLAPKLGVRLNAVSYNIILKGACLRDGFMGARGVLDEMLSRGVRPTVVTFNTL 205
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
+ + C+ + G A L+D+M +R P++A ++ LC+ + DA +L + + C
Sbjct: 206 VGSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLMFDMEYRGC 265
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
D ++ + G ++L + + P +YN LI +C++ EA R
Sbjct: 266 QADVVNYGVLMSSRARHGDADGVRELLSAMRKRKLKPDDASYNILIRCLCDAGRADEAHR 325
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+M +G P TY +L+ G C+ + G+R+ M+ G P +F L GL
Sbjct: 326 ALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQARTFRHLARGLG 385
Query: 476 ESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIVSDLDSGAGAL---DELLVKN 526
E G E V+ MA S+++D W ++T + S + A + +EL++ N
Sbjct: 386 EDGKAEEAFFVLEQMARREMSLDADGWQAVVTCVRSSCSTQASEIKLVNELVLSN 440
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 205/406 (50%), Gaps = 4/406 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++IH +A +L +K+ +K N + +++ Y G + AVK +
Sbjct: 403 TYNNLIHWHCQAHKLREALNLFDRMKK-AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSE 461
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + +V + TL+ + K +D + + + V N +T N+LI +C D
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQN-GVSCNDYTYNVLINGICMVD 520
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V +L S G +P ++T+ +I+ G+V G + +A V+ + ++G P+ TYT
Sbjct: 521 RVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYT 580
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+DGY + G A+K+++++ G++P+ V Y +I FC+ A LL +L+
Sbjct: 581 SFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKD 640
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P++ + +I +++ + ++ +++ + D + +T+I K+G + A
Sbjct: 641 GLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFA 700
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+L+ E +G IP T+ L G+C S ++ A +L ++M V PNVF YNMLI G
Sbjct: 701 LELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLING 760
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY-ESGNEGEV 483
+ + +E R+ +EML+ G P+ T++ +L+ + E+ N +V
Sbjct: 761 YLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCADV 806
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 178/357 (49%), Gaps = 4/357 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S L+ +L L+ ++R+ +F+ +P+VFT N LI C+ + A+ +
Sbjct: 366 STFELSLVLKGLLNDRRWKDAVCLFEEMADSG--LPDVFTYNNLIHWHCQAHKLREALNL 423
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
D M G+ P++ T+ ++L GY +G ++ A +++ ++ G+ P+ TY LM GYI
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIA 483
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+A ++DEM+ NGV N+ TY V+I C + E +L + ++P+
Sbjct: 484 KKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMT 543
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF- 386
+I+ + G + A +++++ K P+ ++ I C+ G A K+ ++
Sbjct: 544 YNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
RG P ++ YN LI G C+ ++ A +L +++ G+ PN YN LI G+ + K
Sbjct: 604 RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMK 663
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
E + E M+ G + ++++ LI+G + GN ++ S A G + D++ F
Sbjct: 664 EVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYI-PDAFTF 719
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 173/360 (48%), Gaps = 3/360 (0%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
+TY+S++ + D L +E+ K +IT++R Y + A
Sbjct: 437 NTYNSLLMGYCKKGCMDEAVKLYSEMPME-GFKPNVVTYITLMRGYIAKKDFDNAYALLD 495
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+++ V + + N L+N + R V M K+ + +P + T N +I K
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSE-GFIPTMMTYNSIINGFVKA 554
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A V +M G+ PN++T+T+ + GY G + A ++ D+ RG PD Y
Sbjct: 555 GMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAY 614
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L++G+ + G ++ A++++ + +G+ PN V Y +I + E + M++
Sbjct: 615 NALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
V ++ +ID ++G V A EL+ ++ K +PD + + H LC+ G I
Sbjct: 675 GGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
AKKL +E R + P++ YN LI G +L EA RL D+M+ G++P+ TY++L+
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 166/344 (48%), Gaps = 1/344 (0%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
P A T+ + V ++S LL + +F R + V + + +
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRV-DAWMFD 196
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
L+ A K+ E A+R+ DEMP + P+ + + GD A R+ ++ +
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+ TY ++D +K GR+ +A++V DEM D G + + + ++ +C ++ G A
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
NL + L+ VP+ + +I + G + A EL +++ + +P S ++
Sbjct: 317 LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKG 376
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
L + + +A LF+E +P + TYN LI C++ +L EA L+D M + GV+P++
Sbjct: 377 LLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSI 436
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
TYN L+ G+CK G E +++ EM +G PN ++ L+ G
Sbjct: 437 NTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRG 480
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 150/353 (42%), Gaps = 42/353 (11%)
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M + G+VP++ + T +L ++A +F ++ RG+ DA + LM +K G
Sbjct: 147 HMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEG 206
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
DAV++ DEM ++P++ Y + I A CK G A +L +M + +
Sbjct: 207 MHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYR 266
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FER 388
++D+L + G++E+A + + D +++T++ C ++ A LF E +
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKD 326
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAG-----------------------------RLWDD 419
G +P+ + Y LI G C+ +T+ R W D
Sbjct: 327 GIVPTKVMYGVLIRG-CDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKD 385
Query: 420 -------MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
M + G+ P+VFTYN LI C+ +E + + + M G P+ +++ L+
Sbjct: 386 AVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLM 444
Query: 473 GLYESGNEGEVGKVVSMATASGSVESDSWNFLLTR---IVSDLDSGAGALDEL 522
G + G E K+ S G + L R D D+ LDE+
Sbjct: 445 GYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A M GV P+ + ++ +G + +A L +M R Y + + ++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
+EG EDA L+ + PD + + I LCK G A ++ E E G
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC---KIGNAKEGI 449
TY T++ + ++ + EA R+ D+M + G + +V L++G+C ++GNA +
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA---L 317
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ +E L G P K + +LI G + G + ++ T G + S
Sbjct: 318 NLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPS 366
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 202/366 (55%), Gaps = 6/366 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I + G E A++ + ++E + SV ++T++ ++ ++++ +F S
Sbjct: 376 FSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES- 434
Query: 177 HKFKV-VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
F+ + NVF CN ++ LCK+ ++ A +L +M S G+ PN+V++ ++ + + +
Sbjct: 435 --FETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKN 492
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A+ VF ++L++G P+ TY++L+DG K + ++V+++M + +E N V Y
Sbjct: 493 MDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQT 552
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC-KVIDLLCEEGKVEDACELWKRLLRK 354
+I CK ++ +AR LL +M++ K S + +ID +EG+++ A ++ +
Sbjct: 553 IINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCAN 612
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
P+ ++++ LCK ++ +A ++ DE + +G + Y LI G C+ + + A
Sbjct: 613 GISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESA 672
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ +++E+G+ P+ YN LI GF +GN + + ++ML G + +++ LI+G
Sbjct: 673 SALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 732
Query: 474 LYESGN 479
L + GN
Sbjct: 733 LLKEGN 738
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 194/418 (46%), Gaps = 48/418 (11%)
Query: 115 NLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
N+FI T++ G+ + A + ++E + +V S N ++ A + K DL +F
Sbjct: 441 NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVF 500
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG--- 229
N K + PN +T +ILI K D + + V+++M S + N V + TI+ G
Sbjct: 501 SNMLEK-GLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCK 559
Query: 230 ---------------------------------YVWRGDIENAKRVFGDILDRGWVPDAT 256
++ G+++ A + ++ G P+
Sbjct: 560 VGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVI 619
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TYT LMDG K R+ A+++ DEM++ GV+ + YG +I FCK A L ++
Sbjct: 620 TYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSEL 679
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L+ PS + +I G + A +L+K++L+ D +T+I L KEG +
Sbjct: 680 LEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNL 739
Query: 377 WEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
A L+ E + G +P + Y ++ G+ + + + +++++M + V PNV YN +
Sbjct: 740 ILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 799
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
I G + GN E R+ +EMLDKG P+ +F +L+ G+VGK + AS
Sbjct: 800 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV--------SGKVGKFQPIRAAS 849
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 209/483 (43%), Gaps = 58/483 (12%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
++ R+ N + AL+ +++A + +F + D + +IH L + PE
Sbjct: 78 LLNRRNNPEAALRFYNWARPWRGSF-EDGDVFWVLIHILVTS----------------PE 120
Query: 110 IKC-GENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNALVQNKRYDL 167
+L I + + V + K F + + R+ N LLNA ++++ D
Sbjct: 121 TYGRASDLLIRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDY 180
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
+ N + V+P V N + AL +++ + A + M ++G+ + T ++
Sbjct: 181 A-VDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLM 239
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDA-------------------------------- 255
+ A VF ++RG PD+
Sbjct: 240 RASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLC 299
Query: 256 ----TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
TYT ++ +K G + DA++ DEM +G+ N V +I CK G A +
Sbjct: 300 VPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALD 359
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
L M P+S +I+ + G++E A E +K++ P TII
Sbjct: 360 LFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWL 419
Query: 372 KEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K K EA KLFDE FE G + ++ NT+++ +C+ ++ +A L M +G+ PNV
Sbjct: 420 KGQKHEEALKLFDESFETG-LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVV 478
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
+YN ++ C+ N + ML+KG PN ++S+LI+G +++ +E V +VV+
Sbjct: 479 SYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQM 538
Query: 491 TAS 493
T+S
Sbjct: 539 TSS 541
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 182/393 (46%), Gaps = 43/393 (10%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
R++N+DLA +F + N TY +I + V ++ ++ + I+
Sbjct: 489 RKKNMDLARTVF--SNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSS-NIEV 545
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLM 171
++ T+I G+ A + IE+ S S N++++ ++ D
Sbjct: 546 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAA 605
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
++ + PNV T L+ LCK + ++ A+ + DEM + G+ ++ + ++ G+
Sbjct: 606 YEEMCAN-GISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFC 664
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+ ++E+A +F ++L+ G P Y L+ G+ LG + A+ + +M +G+ +
Sbjct: 665 KKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 724
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY + ID L +EG + A +L+ +
Sbjct: 725 TYTTL-----------------------------------IDGLLKEGNLILASDLYTEM 749
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAEL 410
+PD + + I++ L K+G+ + K+F+E ++ ++ P++L YN +IAG L
Sbjct: 750 QAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 809
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
EA RL D+M++KG+ P+ T+++L+ G K+G
Sbjct: 810 DEAFRLHDEMLDKGILPDGATFDILVSG--KVG 840
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 37/317 (11%)
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
F+V F N L+ A K + A+ ++++M +G++P + L V R I
Sbjct: 158 FEVNSRAF--NYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITE 215
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK ++ ++ G D T +LM ++ + +A++V + G EP+ + Y + ++
Sbjct: 216 AKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQ 275
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
A CK A +LL +M ++K C+P
Sbjct: 276 ACCKTLNLAMANSLLREMKEKKL----------------------------------CVP 301
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLW 417
+++I K+G + +A + DE I +++ +LI G C++ +L A L+
Sbjct: 302 SQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF 361
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
M +G PN T+++LI+ F K G ++ + ++M G P+ +I+G +
Sbjct: 362 YKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKG 421
Query: 478 GNEGEVGKVVSMATASG 494
E K+ + +G
Sbjct: 422 QKHEEALKLFDESFETG 438
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 215/478 (44%), Gaps = 58/478 (12%)
Query: 77 NYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
N T+ ++++ L R +A V+ ++ E Q + G T++ G
Sbjct: 9 NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYG-----TIVNGMCKLGDTVS 63
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ ++++ ++ +V + +++ L ++ + +F H+ + PNV T N +I
Sbjct: 64 ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIF-TEMHEKGIFPNVLTYNCMI 122
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C A ++L +M + P++VT + ++ +V G + A+ ++ ++L R
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS------ 306
P TY+ ++DG+ K RL DA + D M G P+ +T +I+ C+ K+
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242
Query: 307 -----GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
A++L +M+ P C ++ LCE GK+E A E++K + D A
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFE---------------------------------- 387
+ II+ +CK K+ EA LF+
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362
Query: 388 --RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+G IPS +TYN+++ G C+ L EA ++ D MV +G P+V T++ LI+G+CK G
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+G+ + EM +G + +++ LI G + G+ + +SG V D+ F
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSG-VCPDTITF 479
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 150/280 (53%), Gaps = 12/280 (4%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M G N+VT TT++ G G + A + +++ G PDA TY +++G KLG
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
A+ ++ +M+++ ++ N V Y +++ CK +A+N+ +M ++ P+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+ID C GK DA +L + ++ +N PD S +I+ KEGK+ A++L+ E R +
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 391 I-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM-----------LIQG 438
I P+ +TY+++I G C+ + L +A ++D MV KG P++ T N LI G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
FC++GN + +EM+ G P+ + + L+ GL E+G
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENG 280
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 193/400 (48%), Gaps = 32/400 (8%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N TY+ +I + E LL ++ + +P++ L ++ ++G EL
Sbjct: 114 NVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELY 173
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV------PNVFT 187
+ R N+ + + +++++ ++ R ++++H F ++ P++ T
Sbjct: 174 REMLRR----NIFPTTITYSSMIDGFCKHSR-------LEDAKHMFDLMVSKGCSPDIIT 222
Query: 188 CNILIKALCKKD-----------DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
N LI C+ +V A + EM S G+ P++VT T+L G G +
Sbjct: 223 LNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL 282
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E A +F D T ++++G K ++ +A + + + NGVE + VTY ++
Sbjct: 283 EKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNIL 342
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I F K A ++ +ML + +PS+ ++D C++ ++E+A ++ ++ + C
Sbjct: 343 IGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGC 402
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD ST+I CK G++ + +LF E +RG + +TYN LI G C+ +L A
Sbjct: 403 SPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQD 462
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
++++MV GV P+ T+ ++ G C ++G+ +LE++
Sbjct: 463 IFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 15/343 (4%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
NV T L+ LC++ V A+ ++D M G P+ VT+ TI+ G GD +A +
Sbjct: 8 ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ + + Y+ ++D K G A + EM + G+ PN +TY MI+ +C
Sbjct: 68 LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCS 127
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K +A LL DM++R P +I+ +EGKV A EL++ +LR+N P
Sbjct: 128 YGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTIT 187
Query: 363 SSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNT-----------LIAGMCESAEL 410
S++I CK ++ +AK +FD +G P ++T NT LI G C+ +
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
A L+ +M+ GV P++ T N L+ G C+ G ++ + + + + + +++
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNII 307
Query: 471 IEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIVSD 511
I G+ + E + + +G VE+D ++N L+ V +
Sbjct: 308 INGMCKGNKVDEAWDLFNSLPVNG-VETDVVTYNILIGVFVKE 349
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 136/269 (50%), Gaps = 1/269 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I + G +A F + V + + NTLL L +N + + MFK K
Sbjct: 237 LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK-VFQKS 295
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K+ + TCNI+I +CK + V+ A + + +P G+ ++VT+ ++G +V G+ A
Sbjct: 296 KMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRA 355
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ ++ ++L +G +P TY ++DG+ K RL +A +++D M G P+ VT+ +I+
Sbjct: 356 EDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
+CK + + L +M QR V + +I C+ G + A ++++ ++ PD
Sbjct: 416 YCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPD 475
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFER 388
+++ LC + ++ + + ++ ++
Sbjct: 476 TITFRSMLAGLCTKAELQKGLTMLEDLQK 504
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%)
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E G +++T+ TL+ G+C + +A L D MVE+G +P+ TY ++ G CK+G+
Sbjct: 3 ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ +L +M + N +S +++ L + GN
Sbjct: 63 SALNMLRKMDESQIKANVVIYSAIVDRLCKDGN 95
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
MVE G NV T+ L+ G C+ G + + +++ M+++G P+ ++ ++ G+ + G+
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
>gi|326507622|dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 177/379 (46%), Gaps = 35/379 (9%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+F +I G A RP+ A+ F R S + + L++ LV N R D M
Sbjct: 92 TVFAGLIDRLGAASRPDAALLVFFRAVPAFCSHSNATFHALIHCLVCNGRVDAARNMLPR 151
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ K V PN + NI++K LC +D GA VLDEM G+ P +VT T++G G
Sbjct: 152 A-AKLGVRPNAVSYNIILKGLCGRDGSAGARVVLDEMLGRGVRPTVVTFNTLVGAACQEG 210
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
D+ A+++ +++ RG P+A TY++LM G GR DA K+M +ME G + V YG
Sbjct: 211 DVGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYG 270
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
V++ A+ + R LL DM +RK P A +I LC+ GKVE+A + +
Sbjct: 271 VLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNVLIKCLCDSGKVEEAHKALVEM--- 327
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ + G++PS TY L G C + +
Sbjct: 328 ------------------------------QLKDGTVPSAATYRVLADGCCRAGDFGLGL 357
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
R+++ M+ G P T+ L +G + G A E +LE+M + G + + + L +
Sbjct: 358 RVFNAMLASGHRPLGHTFKHLAKGLGEDGMADEACFVLEKMAESGVWMDAEGWRSLAACV 417
Query: 475 YESGNEGEVGKVVSMATAS 493
SG+ GEV V +A +S
Sbjct: 418 C-SGSAGEVKLVDELALSS 435
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 146/318 (45%), Gaps = 8/318 (2%)
Query: 217 VPNLVTHT-----TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
VP +H+ ++ V G ++ A+ + G P+A +Y +++ G
Sbjct: 118 VPAFCSHSNATFHALIHCLVCNGRVDAARNMLPRAAKLGVRPNAVSYNIILKGLCGRDGS 177
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A V+DEM GV P VT+ ++ A C+ G A L ++M++R P++ +
Sbjct: 178 AGARVVLDEMLGRGVRPTVVTFNTLVGAACQEGDVGAAEQLKEEMVRRGVSPNAVTYSLL 237
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI 391
+ LC+ G+ +DA +L + + C + ++ ++G + + L + + +
Sbjct: 238 MRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYGVLMSAYARQGDVDSVRGLLSDMRKRKL 297
Query: 392 -PSLLTYNTLIAGMCESAELTEAGRLWDDM-VEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P +YN LI +C+S ++ EA + +M ++ G P+ TY +L G C+ G+ G+
Sbjct: 298 GPDDASYNVLIKCLCDSGKVEEAHKALVEMQLKDGTVPSAATYRVLADGCCRAGDFGLGL 357
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFLLTRI 508
R+ ML G P +F L +GL E G E V+ SG ++++ W L +
Sbjct: 358 RVFNAMLASGHRPLGHTFKHLAKGLGEDGMADEACFVLEKMAESGVWMDAEGWRSLAACV 417
Query: 509 VSDLDSGAGALDELLVKN 526
S +DEL + +
Sbjct: 418 CSGSAGEVKLVDELALSS 435
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 46/436 (10%)
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
E+L I + R+ P A+ ++ +F V S RS NT+L A + + V ++
Sbjct: 104 ESLLIPLFRSLA----PGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLY 159
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ H+ +V P FT +I +ALC+ + A+ +L M G VP+ V + T++
Sbjct: 160 RRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCA 219
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+G + A + ++ G D T+ ++ G LGRL +A +++D M G PN +T
Sbjct: 220 QGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAIT 279
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
YG +++ C + EAR +L + + V L VI +GK+++A EL++ +
Sbjct: 280 YGFLLKGLCLASQVEEARTMLGRVPELNVV----LFNTVIGRCLLDGKLKEAAELYETMG 335
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLT--------------- 396
K C PD S +IH LCK G++ A KL E E +G PS++T
Sbjct: 336 SKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWD 395
Query: 397 --------------------YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
YN +I +C+ + +A R +M +G +P++ TYN +I
Sbjct: 396 NIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTII 455
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN-EGEVGKVVSMATASGS 495
C +E + E +L +G N +++ LI L +G+ + + M S
Sbjct: 456 YHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCS 515
Query: 496 VESDSWNFLLTRIVSD 511
++ S+N L+ + D
Sbjct: 516 LDIVSYNGLIKALCRD 531
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 166/329 (50%), Gaps = 2/329 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T +ILI LCK + A+++L EM G P++VT+T +L + G +N + +
Sbjct: 341 PDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAM 400
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ D+G + Y ++ K R+ DA++ M EM+ G +P+ TY +I C
Sbjct: 401 LEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCN 460
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ EA L +++L V ++ +I L G +DA L ++ C D
Sbjct: 461 NNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVS 520
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I LC++G + + L E E+G P+ ++YN LI+ +C++ + +A L +M+
Sbjct: 521 YNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEML 580
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
+ + P++ TYN LI G CK+G + +LE++ ++ + ++++LI ++
Sbjct: 581 NQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLH 640
Query: 482 EVGKVVSMATASGSVESD-SWNFLLTRIV 509
+ +++ A SG ++ +W ++ V
Sbjct: 641 DASMLLNRAVTSGITPNERTWGIMVQNFV 669
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 213/510 (41%), Gaps = 73/510 (14%)
Query: 39 PQRLYPKR--LVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
P R+ P R L+ +FR AL + +F S ++ +Y++++ ARA
Sbjct: 96 PSRVPPLRESLLIPLFRSLAPGRALHLLDQLPHRF--AVSPSFRSYNTVLAAFARADCHT 153
Query: 96 AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR---------------- 139
V SL + + F R GR + A+ T LR
Sbjct: 154 DVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEAL-TMLRSMARHGCVPDTVLYQT 212
Query: 140 -IEKFNVQRSVRSLNTLLNALVQ-------NKRYDLVHLMFKNSRHKFKV---------- 181
I Q V TLL+ + N D+VH + R +
Sbjct: 213 VIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRG 272
Query: 182 -VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV----------------------- 217
VPN T L+K LC VE A +L +P + +V
Sbjct: 273 CVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYE 332
Query: 218 --------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
P+ T++ ++ G G + +A ++ ++ D+G+ P TYT+L+ + + G
Sbjct: 333 TMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNG 392
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ +++ M D G+ N Y MI A CK ++ +A + +M + Y P
Sbjct: 393 MWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYN 452
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-R 388
+I LC ++E+A L++ LL + + + +T+IH L + G +A L ++
Sbjct: 453 TIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLH 512
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +++YN LI +C + + L +M EKG++PN +YN+LI CK ++
Sbjct: 513 GCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDA 572
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + +EML++ P+ +++ LI GL + G
Sbjct: 573 LELSKEMLNQELTPDIVTYNTLINGLCKMG 602
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 161/315 (51%), Gaps = 2/315 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR A+K +E S+ + LL++ +N +D + M + K + N+
Sbjct: 357 GRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDK-GLSMNLEG 415
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N +I A+CK ++ A+R + EM S G P++ T+ TI+ +E A+ +F ++L
Sbjct: 416 YNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLL 475
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G V +A TY L+ ++ G DA+ + ++M +G + V+Y +I+A C+
Sbjct: 476 HEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVD 535
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+ LL +M ++ P++ +I LC+ +V DA EL K +L + PD +T+I
Sbjct: 536 RSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLI 595
Query: 368 HWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ LCK G + A L ++ + + ++TYN LI+ C++ L +A L + V G+
Sbjct: 596 NGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGIT 655
Query: 427 PNVFTYNMLIQGFCK 441
PN T+ +++Q F +
Sbjct: 656 PNERTWGIMVQNFVR 670
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRN 123
+ + H N TY+++IH L R ++ SL ++ V+
Sbjct: 469 YLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDM---------------VLHG 513
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
L + S N L+ AL ++ D ++ K + P
Sbjct: 514 CSL---------------------DIVSYNGLIKALCRDGNVDRSIMLLSEMAEK-GIKP 551
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N + N+LI LCK V A+ + EM + + P++VT+ T++ G G + A +
Sbjct: 552 NNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLL 611
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ + D TY +L+ + K L DA +++ +G+ PNE T+G+M++ F +
Sbjct: 612 EKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 222/515 (43%), Gaps = 75/515 (14%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + ++ + + Q +D A +F N TY++II L +A+ D E
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQM--VEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+ ++ + +K + T+I A + A F ++ V+ + NT+++
Sbjct: 281 GVFQKM-VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
L + + D +F+ K V P+ T I+I LCK V+ A V +M G+ P
Sbjct: 340 LCKAQAIDKAEGVFQQMIDK-GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP 398
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N T+ ++ GY+ G E + ++ PD TY +L+D K G+ +A +
Sbjct: 399 NNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLF 458
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP-----SSALCC---- 329
D M G++P+ YG+M+ + K E +LL+ M+ P ++ +C
Sbjct: 459 DSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKR 518
Query: 330 --------------------------KVIDLLCEEGKVEDAC------------------ 345
+ID LC+ G+V+DA
Sbjct: 519 AMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVF 578
Query: 346 -----------------ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
EL+ +L + PD +T++ LCKEG++ EA++L D
Sbjct: 579 NSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVC 638
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P +++YNTLI G C ++ + EA +L D MV G++PN+ +YN L+ G+CK G
Sbjct: 639 MGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDN 698
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ EML KG P +++ ++ GL+ SG E
Sbjct: 699 AYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 194/433 (44%), Gaps = 42/433 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
+Y++++ L R + LL + + C ++ + VI + G+ + A F
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF 216
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
L + V V + NT+++ L + + D +F+ K V PN T N +I LCK
Sbjct: 217 LEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK-GVKPNNVTYNTIIDGLCK 272
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+V+ A V +M G+ P+ VT+ TI+ G ++ A+ VF ++DRG PD T
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVT 332
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y ++DG K + A V +M D GV+P+ +TY ++I+ CK + A + M+
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI 392
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+ P++ +I G+ E+ + K + + PD ++ +LCK GK
Sbjct: 393 DKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCN 452
Query: 378 EAKKLFDEFERGSI-PSLLTY-----------------------------------NTLI 401
EA+ LFD R I PS+ Y NT+I
Sbjct: 453 EARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ A + E ++ M ++G+ PNV TY LI CK+G + + +M+++G
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT 572
Query: 462 PNKTSFSLLIEGL 474
PN F+ L+ GL
Sbjct: 573 PNNVVFNSLVYGL 585
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 173/322 (53%), Gaps = 9/322 (2%)
Query: 189 NILIKALCKKDDVEGAIRVL-DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG--- 244
N L+K LC V A+ VL +MP +G +V++ T+L G R E A+ +
Sbjct: 123 NQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMV 182
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
D D PD +Y ++++G+ G++ A + EM GV P+ VTY +I+ CK +
Sbjct: 183 DGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQ 239
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ A ++ M+++ P++ +ID LC+ +V+ A ++++++ K P N +
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299
Query: 365 TIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
TII LCK + A+ +F + +RG P +TYNT+I G+C++ + +A ++ M++K
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
GV+P+ TY ++I G CK + + ++M+DKG PN +++ LI G +G EV
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419
Query: 484 GKVVSMATASGSVESDSWNFLL 505
+ + +A +E D + + L
Sbjct: 420 VQRIKEMSAH-DLEPDVFTYGL 440
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 244/518 (47%), Gaps = 52/518 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P L ++ + + Q++D A +F N TY+ +IH ++ V
Sbjct: 363 PDNLTYTIIIDGLCKAQSVDRAEGVFQQM--IDKGVKPNNGTYNCLIHGYLSTGQWEEVV 420
Query: 99 SLLTELKQN---PEI--------------KCGE--NLFITVIRNYGLAGRPELAVKTFLR 139
+ E+ + P++ KC E +LF ++IR G+ +P + + +
Sbjct: 421 QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK-GI--KPSVTIYGIM- 476
Query: 140 IEKFNVQRSVRSLNTLLNALVQN-----------------KRY---DLVHLMFKNSRHKF 179
+ + + ++ ++ LLN +V N KR +++H+ K +
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
PNV T LI ALCK V+ A+ ++M + G+ PN V +++ G E
Sbjct: 537 S--PNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKV 594
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ +F ++L++G PD + ++ K GR+ +A +++D M G++P+ ++Y +I+
Sbjct: 595 EELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C + EA LLD M+ P+ ++ C+ G++++A L++ +LRK P
Sbjct: 655 HCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPG 714
Query: 360 NAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+TI++ L + G+ EA++L+ + + + S+ TY+ ++ G C++ EA +++
Sbjct: 715 VETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQ 774
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ ++ ++ T+N++I G K G ++ + + + G P+ ++ L+ E L E G
Sbjct: 775 SLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEG 834
Query: 479 NEGEVGKVVSMATASGSV-ESDSWNFLLTRIVSDLDSG 515
+ E+ + S+ SG+ S N L+ ++ LD G
Sbjct: 835 SLEELDCLFSVMEKSGTAPNSHMLNALIRKL---LDRG 869
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 138/264 (52%), Gaps = 8/264 (3%)
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P+ T++ ++G + G +E FG IL GW D L+ G R+ +A+
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 276 KV-MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK---V 331
V + +M + G V+Y +++ C +++ EAR LL M+ + S V
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I+ EG+V+ A L+ L PD +TII LCK ++ A+ +F + E+G
Sbjct: 200 INGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P+ +TYNT+I G+C++ E+ A ++ MV+KGV+P+ TYN +I G CK
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGL 474
+ ++M+D+G P+ +++ +I+GL
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGL 340
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 176/427 (41%), Gaps = 38/427 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y ++H + A + LL + N I +F TVI Y + + F+++
Sbjct: 473 YGIMLHGYGKKGALSEMHDLLNLMVANG-ISPNHRIFNTVICAYAKRAMIDEVMHIFIKM 531
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
++ + +V + TL++AL + R D L F N V PN N L+ LC D
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQF-NQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
E + EM + G+ P++V T+L G + A+R+ ++ G PD +Y
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+DG+ R+ +AVK++D M G++PN V+Y ++ +CK + A L +ML++
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P +++ L G+ +A EL+ +++ + S I+ CK EA
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAF 770
Query: 381 KLFDEF------------------------------------ERGSIPSLLTYNTLIAGM 404
K+F G +PS++TY + +
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
E L E L+ M + G PN N LI+ G L ++ +K
Sbjct: 831 IEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEA 890
Query: 465 TSFSLLI 471
++ S+LI
Sbjct: 891 STTSMLI 897
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 51/235 (21%)
Query: 284 NGVEPNEVTYGVMIEAFCK-----------------------------------GKKSGE 308
N V P+ TY ++I FC+ K+ GE
Sbjct: 78 NKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGE 137
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDL------LCEEGKVEDACELWKRLL---RKNCMPD 359
A ++L + +P V+ LC+ + E+A EL ++ +C PD
Sbjct: 138 AMHVL-----LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPD 192
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I+ EG++ +A LF E G P ++TYNT+I G+C++ E+ A ++
Sbjct: 193 VVSYNIVINGFFNEGQVDKAYSLF--LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
MVEKGV+PN TYN +I G CK + ++M+DKG P+ +++ +I+GL
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL 305
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 1/264 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I + A R + AVK + ++ ++ S NTLL+ + R D + +F+ K
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P V T N ++ L + A + M + ++ T++ IL G+ +
Sbjct: 710 -GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDE 768
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++F + D T+ +++DG K GR DA+ + + NG+ P+ VTY ++ E
Sbjct: 769 AFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAE 828
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ E L M + P+S + +I L + G++ A +L KN
Sbjct: 829 NLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSL 888
Query: 359 DNAISSTIIHWLCKEGKIWEAKKL 382
+ + +S +I +E AK L
Sbjct: 889 EASTTSMLISLFSREEYQQHAKSL 912
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 17/319 (5%)
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ LC E A +V+ EM G VP+ T++ ++G +ENA +F ++ G V
Sbjct: 462 RCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVV 521
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TYT+L+D + K G + A +DEM +G EP VTY +I A+ K KK A L
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD------------- 359
+ M+ + P+ +ID C+ G +E AC+++ R+ +PD
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641
Query: 360 --NAIS-STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
N ++ ++ LCK K+ +A+ L + F G P+ + Y+ LI G C++A+L EA
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++ MVE+G PNV+TY+ LI K +++L +ML+ C PN ++ +I+GL
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761
Query: 476 ESGNEGEVGKVVSMATASG 494
+ E K++ M G
Sbjct: 762 KVAKTDEAYKLMLMMEEKG 780
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 184/372 (49%), Gaps = 18/372 (4%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ E A K + + + ++ L R + +FK + VVP+V+T
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT-GVVPDVYT 526
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
ILI K ++ A LDEM G P +VT+TT++ Y+ + A +F ++
Sbjct: 527 YTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMI 586
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM---------------EDNGVE-PNEV 291
+G P+ TYT L+DGY K G + A ++ M ++N E PN V
Sbjct: 587 AKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVV 646
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TYG +++ CK K +AR+LL+ M P++ + +ID C+ K+++A E++ ++
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAEL 410
+ + P+ S++I L K+ ++ K+ + E P+++ Y +I G+ + A+
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA +L M EKG +PNV TY +I GF K G + + + EM KGC PN ++++L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Query: 471 IEGLYESGNEGE 482
I +G+ E
Sbjct: 827 INHCCATGHLDE 838
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 211/486 (43%), Gaps = 46/486 (9%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
++ + Q+L P +V ++ ++ +L ++ F +AG+ + H Y +++ R
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGR-QIGYDHTPAVYIALLDVFERGSYD 187
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E L E++ + + G+ L +IR G +A++ R++ F + + + N
Sbjct: 188 RVPEEFLREIRGDDKEVLGK-LLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNA 246
Query: 155 LLNALVQNKRYDLVHLMFKN------SRHKFKV-------------------------VP 183
L+ ++ + D L+ + S +F + VP
Sbjct: 247 LVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVP 306
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I LC+ E A+ L+ M S +PN+ T+ +L G + + + KR+
Sbjct: 307 NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRIL 366
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G P T + L+ Y K + A K++ +ME +P V Y ++I + C G
Sbjct: 367 SMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSG 426
Query: 304 KKSGE---------ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
GE A ++ML V + LC GK E A ++ ++
Sbjct: 427 ---GELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
+PD + S +I +LC ++ A LF E + G +P + TY LI ++ + +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+MV G EP V TY LI + K + E M+ KGCFPN +++ LI+G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 474 LYESGN 479
+SGN
Sbjct: 604 YCKSGN 609
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 17/308 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P V T LI A K V A + + M + G PN++T+T ++ GY G+IE A ++
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 243 FGDILDRGWVPDA----------------TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ + +PD TY L+DG K ++ DA +++ M +G
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
EPN + Y +I+ FCK K EA+ + M++R Y P+ +ID L ++ +++ +
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLK 736
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
+ ++L +C P+ I + +I L K K EA KL E +G P+++TY +I G
Sbjct: 737 VLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
++ ++ + L+ +M KG PN TY +LI C G+ E +LEEM + +
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856
Query: 466 SFSLLIEG 473
S+ +IEG
Sbjct: 857 SYCKVIEG 864
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 3/275 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T L+ LCK V+ A +L+ M G PN + + ++ G+ ++ A+ V
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++RG+ P+ TY+ L+D K RL +KV+ +M +N PN V Y MI+ K
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EA L+ M ++ P+ +ID + GKV+ EL++ + K C P+
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I+ C G + EA L +E ++ P + +Y +I G E + L +++
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVE 880
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+ G P + Y +LI F K G + + + +E++
Sbjct: 881 KNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVI 915
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 166/358 (46%), Gaps = 19/358 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N TY +++ L +A LL + + C N + +I + A + + A
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVD---GCEPNTIVYDALIDGFCKAAKLDEAQ 700
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV----HLMFKNSRHKFKVVPNVFTCNI 190
+ F ++ + +V + ++L++ L ++KR DLV M +NS PN+
Sbjct: 701 EVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS-----CAPNIVIYTE 755
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I L K + A +++ M G PN+VT+T ++ G+ G ++ +F ++ +G
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TYTVL++ G L +A +++EM+ + +Y +IE + ++ +
Sbjct: 816 CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSL 873
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIH 368
LL+++ + P+ L +ID + G++E A EL K ++ + + +++I+
Sbjct: 874 GLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIY 933
Query: 369 WLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
KI A +LF D G IP L T+ L+ G+ EA +L D + + +
Sbjct: 934 SFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 128/319 (40%), Gaps = 47/319 (14%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + LD A ++FH ++ N TY S+I +L + + D V
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFH--KMVERGYNPNVYTYSSLIDRLFKDKRLDLVL 735
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
+L+++ +N C N+ I GL+ + + A K L +E+ + +V + ++
Sbjct: 736 KVLSKMLEN---SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ + + D +F+ K PN T +LI C ++ A +L+EM
Sbjct: 793 DGFGKAGKVDKCLELFREMGSK-GCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYW 851
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
++ ++ ++ GY + + + + ++ G P Y VL+D ++K GRL A++
Sbjct: 852 PKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALE 909
Query: 277 VMDE-------------------------------------MEDNGVEPNEVTYGVMIEA 299
+ E M +GV P+ T+ ++
Sbjct: 910 LHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMG 969
Query: 300 FCKGKKSGEARNLLDDMLQ 318
+ ++ EA L D + Q
Sbjct: 970 LIRVRRWEEALQLSDSLCQ 988
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 4/164 (2%)
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C G A E RL P + ++ + K+ A+ + E E G
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T +C+ + EA L + ++ PN YN +I G C+ +E + L
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNR 333
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
M C PN ++ +L+ G G +++SM A G S
Sbjct: 334 MRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPS 377
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 200/417 (47%), Gaps = 5/417 (1%)
Query: 62 QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
Q F + S + Y +I L + D E E+ I+ +VI
Sbjct: 323 QAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEI-AGRNIQPSSGTCHSVI 381
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
+ AGR + A+ + K + + + L+N L + + + K
Sbjct: 382 QELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISS 441
Query: 182 VPNVFTC-NILIKALCKKDDVEGAIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENA 239
+ N L+ +LCK V A + M S VP++V+++ ++ G+ ++ A
Sbjct: 442 RSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRA 501
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++++ ++D VP+ TTY ++G ++ GR+ DA V +EM G P+ +TY +I
Sbjct: 502 EKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHG 561
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
F +K +A L + M+ R P++ ++ LC+E K ++A EL+++++ + C PD
Sbjct: 562 FSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 621
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+T+++ C GKI +A ++FDE +G P ++ YN L+ G + + EA +L+
Sbjct: 622 RVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQ 681
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGL 474
MV + +P+ ++N++I G K + + + E M D GC P+ +++ LI GL
Sbjct: 682 VMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 197/407 (48%), Gaps = 7/407 (1%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLL-TELKQN--PEIKCGENLFITVIRNYGLAGR 129
N + T HS+I +L +A D+ SLL T +K+ P++ L + + +
Sbjct: 369 NIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA 428
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
E +I + S S N+LLN+L + K+ +F + VP+V + +
Sbjct: 429 QEFLQGMDRKIS--SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS 486
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
ILI CK D++ A ++ +M + VPN+ T+ L G + +G I +A+ V+ +++
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAA 546
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G PD TY+ L+ G+ + A ++ + M G PN VTY ++ CK K EA
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L M++R P ++ C GK+E A E++ ++ K PD + ++
Sbjct: 607 HELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE-KGVEP 427
+ GK EAK+LF R P +++N +I G+ ++ L +A +++ M + G P
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 726
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ TYN LI G C E +++ +E+ P+ +F++L+E +
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 163/314 (51%), Gaps = 6/314 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ TC+ +I+ LCK V+ A+ +L+ M G P++ TH+ ++ I+ A+
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429
Query: 241 RVFGDILDR---GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVM 296
F +DR +Y L++ K ++ A + M + P+ V+Y ++
Sbjct: 430 E-FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSIL 488
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ FCK + G A L M+ VP+ ++ L +G++ DA +++ ++ C
Sbjct: 489 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGC 548
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD ST+IH K +A +LF+ RG P+ +TYN L+ G+C+ ++ EA
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 608
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
L+ MVE+G +P+ TY L+ GFC +G ++ + + +EM+ KG P+ +++ L++G +
Sbjct: 609 LFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 668
Query: 476 ESGNEGEVGKVVSM 489
+G GE ++ +
Sbjct: 669 RAGKPGEAKQLFQV 682
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 191/434 (44%), Gaps = 76/434 (17%)
Query: 136 TFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
TF R ++ N + V + N LL+ L++++ +F+ + VVPN FT +L+++
Sbjct: 115 TFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ-GVVPNGFTYAVLVQS 173
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPN----------------------------------- 219
C + + + A+R EM G P+
Sbjct: 174 SCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVE 233
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
++ +L +V + A ++F ++ G PDAT Y+ ++ + KL L +A K+
Sbjct: 234 MMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFL 293
Query: 280 EMEDNGVEP-NEVTYGVMIEAFCKGKKSGEA----RNLLD---------DMLQRKYV--- 322
EM P N V + + CK K +A R + + DML R +
Sbjct: 294 EMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESG 353
Query: 323 ------------------PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
PSS C VI LC+ G+V+ A L + ++++ PD A S
Sbjct: 354 RIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHS 413
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER---GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+I+ LCK KI EA++ +R S +YN+L+ +C++ ++ +A ++ MV
Sbjct: 414 MLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMV 473
Query: 422 -EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
E+ P+V +Y++LI GFCKI ++ ++M+D C PN T+++ + GL G
Sbjct: 474 SERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRI 533
Query: 481 GEVGKVVSMATASG 494
+ V A+G
Sbjct: 534 ADAQGVYEEMVAAG 547
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 155/294 (52%), Gaps = 4/294 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
++LI+ L + ++ A E+ + P+ T +++ G +++A + ++
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN--GVEPNEVTYGVMIEAFCKGKKS 306
RG+ PD T+++L++ K ++ +A + + M+ + +Y ++ + CK KK
Sbjct: 403 RGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462
Query: 307 GEARNLLDDML-QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+A + M+ +R +VP +ID C+ ++ A +L+K+++ NC+P+ +
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 522
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ L ++G+I +A+ +++E G P ++TY+TLI G + + +A L++ M+ +G
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
PN TYN L+ G CK E + +M+++GC P++ +++ L+ G G
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVG 636
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 24/427 (5%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPEL 132
F H TY ++IH L + +SL+ + +F ++ G
Sbjct: 8 TFRHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKG------- 60
Query: 133 AVKTFLRIEKFNVQRS-VRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNI 190
QRS + + L+NA +++ D + HK +V + TC
Sbjct: 61 ------------TQRSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFD--TCRK 106
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+++ L K + E+ G +L ++ + G+I A+ VF I G
Sbjct: 107 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWG 166
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P ++ LM+GYI+LG L K+ + M +GV+P+ TY V+I CK K EA
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEAN 226
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L ++ML + VP+ +ID C+ GKV+ A E +K++L + +PD +T+I+ L
Sbjct: 227 DLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGL 286
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
CK+G + +A+ L DE +G P +TY TLI G C+ +L A L + MV++ + +
Sbjct: 287 CKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDD 346
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
Y LI G C+ G A + ++L EML G P+ +++++I + + K++
Sbjct: 347 VAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKE 406
Query: 490 ATASGSV 496
G V
Sbjct: 407 MQRQGHV 413
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 11/324 (3%)
Query: 78 YDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE----NLFITVIRNYGLAGRPELA 133
+DT ++ L + + F V E+ ++CG F ++ + G +A
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYKEI-----LECGYPASLYFFNILMHRFCKEGEIWIA 155
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
F I K+ ++ SV S NTL+N ++ D KN+ H V P+V+T ++LI
Sbjct: 156 QSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLD-QGFKLKNAMHASGVQPDVYTYSVLIN 214
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
LCK+ + A + +EM G+VPN VT TT++ G+ G +++A + +L + ++P
Sbjct: 215 GLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLP 274
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY L+ G K G L A ++DEM G++P+++TY +I+ CK A L
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELR 334
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ M++ +I LC+EG+ DA ++ + +L PDN + II+ CK+
Sbjct: 335 ETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394
Query: 374 GKIWEAKKLFDEFER-GSIPSLLT 396
+ A KL E +R G +P ++T
Sbjct: 395 EDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 181/354 (51%), Gaps = 4/354 (1%)
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + PN+ CN I L + +E A+R L+ M +G++PN+VT+ ++ GY +
Sbjct: 145 QKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRV 204
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E+A + ++ +G PD +Y +M K R+ + + V+++MED + ++VTY +
Sbjct: 205 EDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTL 264
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I CK + + EA L + +R + ++D C+EG+++ A E+ + + C
Sbjct: 265 IHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGC 324
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD + II+ + G++ +A+K+ + ++ G P+ ++Y + G+C+ +EA
Sbjct: 325 IPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEARE 384
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ E+ PN TY++++ GF + G + ++ EM+ KG FP +LL++ L
Sbjct: 385 MMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLC 444
Query: 476 ESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVS--DLDSGAGALDELLVKN 526
G E K + G +V + ++ ++ R D+++ LD++ + N
Sbjct: 445 RIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSN 498
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 209/431 (48%), Gaps = 4/431 (0%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L P+ + +++ Q + +AL F ++ + + H+ Y ++ L++ + +L
Sbjct: 48 LKPRLVCAVLLSQSDERVALDFFFWSDR-QWRYRHDPIVYCVMLDVLSKTKLCQGARRVL 106
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ + + ++ F V+ +Y AG+ A++ ++K ++ ++ NT ++ LV
Sbjct: 107 RLMVRRGIQRTPQD-FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVM 165
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ L F ++PNV T N LIK C VE A+ ++ EMP G P+ V
Sbjct: 166 ANMLEKA-LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKV 224
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
++ T++G I V + D + D TY L+ K +A++ + E
Sbjct: 225 SYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREA 284
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ G + ++V Y +++++CK + +A+ ++++M R +P +I+ + G+V
Sbjct: 285 QKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEV 344
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
A ++ +++ + C P+ + + LC++G EA+++ E+ P+ +TY+ +
Sbjct: 345 GQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVV 404
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G +L++A + +M+ KG P N+L+Q C+IG E + +EE L+ GC
Sbjct: 405 MHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGC 464
Query: 461 FPNKTSFSLLI 471
N +F+ +I
Sbjct: 465 AVNAVNFTTVI 475
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 165/337 (48%), Gaps = 8/337 (2%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S T++ L +N+R V + + K++ + T N LI LCK + A++ L E
Sbjct: 225 SYYTVMGFLCKNRRIREVMDVIEKMEDT-KLLADQVTYNTLIHMLCKHQHADEALQFLRE 283
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
G + V ++ I+ Y G ++ AK + ++ RG +PD TYT +++G+ + G
Sbjct: 284 AQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGE 343
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ A K++ +M +G +PN V+Y ++ C+ S EAR ++ ++ + P++
Sbjct: 344 VGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSV 403
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
V+ EGK+ DAC++ + ++ K P + ++ LC+ G++ EAKK +E G
Sbjct: 404 VMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMG 463
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+ + + T+I C+ ++ A L DDM P+ TY +I K G +E
Sbjct: 464 CAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEAT 523
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ +ML KG P ++ +I G++G+V
Sbjct: 524 ELTLKMLKKGIDPTPVTYRTVIH------RYGQIGRV 554
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 178/420 (42%), Gaps = 5/420 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++IH L + + D L E Q + + + ++ +Y GR + A +
Sbjct: 260 TYNTLIHMLCKHQHADEALQFLRE-AQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNE 318
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ V + ++N Q M + +K PN + +K LC+K
Sbjct: 319 MFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQM-YKHGCKPNTVSYTAFLKGLCQKG 377
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ PN +T++ ++ G+ G + +A V +++ +G+ P
Sbjct: 378 NSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEIN 437
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ ++GR+ +A K M+E + G N V + +I FC+ A +LLDDM
Sbjct: 438 LLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLS 497
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P + +ID L ++G++E+A EL ++L+K P T+IH + G++ +
Sbjct: 498 NKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDL 557
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L D+ R + +N +I +C L A +L ++ + T ++L++
Sbjct: 558 LNLLDKMLTRQECRT--AFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMES 615
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ + G ++ M + P+ + + L + G E + G++ S
Sbjct: 616 YLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISS 675
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 209/451 (46%), Gaps = 27/451 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ RQ +D ALQ+F K F+ + Y ++I L + + LL+E+K+
Sbjct: 309 LIHGFVRQSRVDKALQLFKKMQK--SGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKE 366
Query: 107 ---NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
+P+I+ L + E R+E + + + N++LN LV K
Sbjct: 367 LGIDPDIQILSKLIAYCSEEVDIYRLIEE------RLEDLDTEAMLLLYNSVLNGLVNGK 420
Query: 164 RYDLVHLMFK-----NSRHKFKV----------VPNVFTCNILIKALCKKDDVEGAIRVL 208
D + + + N F+V P+ + +I+I LC ++ A+ +
Sbjct: 421 SVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLF 480
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+M +G N++ + ++ +E + ++ G+ P T+ + +
Sbjct: 481 RDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRR 540
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
+T A+ ++ EM +G EP Y ++++ CK K+S EA N L +M++ ++P
Sbjct: 541 EDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAY 600
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
ID + V+ A E+++ + + PD +T+I+ CK ++ EA + DE
Sbjct: 601 SAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVA 660
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+G +PS++TYN LI G C++ ++ +A MV K EPNV TY LI G C G +
Sbjct: 661 KGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDD 720
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I + EM KGC PN+ SF LI GL + G
Sbjct: 721 AIHLWNEMRGKGCSPNRISFIALIHGLCKCG 751
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 174/349 (49%), Gaps = 5/349 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F VI G+ +LA+ F + + +++V N L++ L + R + +L+ K +
Sbjct: 460 FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMK 519
Query: 177 HK-FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
F+ P FT N + LC+++DV GA+ ++ EM G P + +T ++ R
Sbjct: 520 GSGFR--PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKR 577
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
A +++ G++PD Y+ +DG++K+ + A+++ ++ G P+ V Y
Sbjct: 578 SAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNT 637
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FCK K+ EA ++LD+M+ + VPS +ID C+ G ++ A R++ K
Sbjct: 638 LINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKE 697
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
P+ +T+I LC G+ +A L++E +G P+ +++ LI G+C+ A
Sbjct: 698 REPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAAL 757
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ +M E+ P+ Y LI F N IL+EM+ KG FP+
Sbjct: 758 LYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPD 805
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 191/450 (42%), Gaps = 53/450 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T S++ +R FD S+ E+ + G L I V+ + G + A + R
Sbjct: 236 TLTSVLQAYCNSRKFDKALSVFNEIYGRGWVD-GHVLSILVL-TFSKCGEVDKAFELIER 293
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ + ++ L++ V+ R D +FK + K P+V + LI LC K
Sbjct: 294 MEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQ-KSGFAPDVSVYDALIGGLCAKK 352
Query: 200 DVEGAIRVLDEMPSMGMVPN---------------------------------LVTHTTI 226
++E A+ +L EM +G+ P+ L+ + ++
Sbjct: 353 EIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSV 412
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWV----------------PDATTYTVLMDGYIKLGR 270
L G V ++ A + + + PD T++++++DG G+
Sbjct: 413 LNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGK 472
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
L A+ + +M G + N + Y +I+ + E LL +M + P+
Sbjct: 473 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 532
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-G 389
+ LC V A ++ + + P + ++ LCK + EA E R G
Sbjct: 533 IFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREG 592
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
+P ++ Y+ I G + + +A ++ D+ +G P+V YN LI GFCK+ E
Sbjct: 593 FLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAH 652
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
IL+EM+ KG P+ +++LLI+G ++G+
Sbjct: 653 DILDEMVAKGLVPSVVTYNLLIDGWCKNGD 682
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 212/513 (41%), Gaps = 70/513 (13%)
Query: 10 TAPSCLLQSIGGARCS--LSTITVTPPIKPWPQRLYPKRLVSMIFRQ---------QNLD 58
T S S GA + L +I P P Q L + SM+ + ++
Sbjct: 52 TKSSASFSSPHGAHITNALISIFTKQPFNPDNQEL--RNFGSMLTHEVVENVLSGLKSWK 109
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI 118
+A + F++A F+HN TY+++ L+ AR +A SLL+ N
Sbjct: 110 IAYRFFNWASD-QGGFNHNCYTYNAMASCLSHARQ-NAPLSLLSMDIVNSRCAMSPGALG 167
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
IR G G E A +L+F +
Sbjct: 168 FFIRCLGSTGLVEEA-----------------------------------NLLFDQVKMM 192
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
VPN ++ N L++A+ K ++ L EM G P+ T T++L Y +
Sbjct: 193 RLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDK 252
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A VF +I RGWV D ++L+ + K G + A ++++ MED G+ NE T+ V+I
Sbjct: 253 ALSVFNEIYGRGWV-DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIH 311
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
F + + +A L M + + P ++ +I LC + ++E A L + P
Sbjct: 312 GFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP 371
Query: 359 DNAISSTIIHWLCKEGKIWE-AKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA---- 413
D I S +I + +E I+ ++ ++ + ++ LL YN+++ G+ + +A
Sbjct: 372 DIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAM--LLLYNSVLNGLVNGKSVDKAYYLL 429
Query: 414 ----GRLWDD--------MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G + D MV++ V P+ +++++I G C G + + +M+ GC
Sbjct: 430 RAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCK 489
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
N ++ LI+ L S E ++ SG
Sbjct: 490 QNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSG 522
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 173/314 (55%), Gaps = 2/314 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I G A F ++ + Q V + +T++++L +++R + +F +
Sbjct: 13 YTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 72
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + PN+FT N LI+ LC A +L+EM S+ ++PN+VT + ++ + G++
Sbjct: 73 AK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 131
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ V + + G P+ TY+ LM+GY + +A K+ D M G +P+ +Y ++
Sbjct: 132 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNIL 191
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I +CK K+ GEA+ L ++M+ + P +ID LC+ G++ +A +L+K +L
Sbjct: 192 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 251
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGR 415
+PD S ++ CK+G + +A +LF + + P+++ YN LI MC+S L EA +
Sbjct: 252 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 311
Query: 416 LWDDMVEKGVEPNV 429
L+ ++ +G++PN+
Sbjct: 312 LFSELFVQGLQPNM 325
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 160/313 (51%), Gaps = 1/313 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T +I LCK + A + +M G P++VT++TI+ + A +
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F + +G P+ TY L+ G R +A +++EM + PN VT+ ++I FCK
Sbjct: 68 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
EAR +L M + P+ +++ + +V +A +L+ ++ K C PD
Sbjct: 128 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFS 187
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I+ CK +I EAK+LF+E +G P +++YNTLI G+C+ L EA L+ +M+
Sbjct: 188 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 247
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
G P++ TY++L+ GFCK G + R+ M PN +++LI+ + +S N
Sbjct: 248 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLK 307
Query: 482 EVGKVVSMATASG 494
E K+ S G
Sbjct: 308 EARKLFSELFVQG 320
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 150/269 (55%), Gaps = 1/269 (0%)
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
M + G P++ T+TTI+ G G+ A +F + + G PD TY+ ++D K R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A+ + M+ G+ PN TY +I+ C + EA +L++M+ +P+
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERG 389
+I++ C+EG V +A + K + P+ S++++ + +++EA+KLFD +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P + +YN LI G C++ + EA +L+++M+ +G+ P++ +YN LI G C++G +E
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + ML G P+ ++S+L++G + G
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQG 269
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 140/252 (55%), Gaps = 1/252 (0%)
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ RG+ PD TYT +++G K+G A + +M + G +P+ VTY +I++ CK ++
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA ++ M + P+ +I LC + +A + ++ N MP+ S
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I+ CKEG ++EA+ + E G P+++TY++L+ G AE+ EA +L+D M+ KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+P+VF+YN+LI G+CK E ++ EM+ +G P+ S++ LI+GL + G E
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 485 KVVSMATASGSV 496
+ +G++
Sbjct: 241 DLFKNMLTNGNL 252
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 202/450 (44%), Gaps = 76/450 (16%)
Query: 104 LKQNPEIKCGENLFITVIRNYGL----AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
L++ PE+ C +LF I GL + L + + K V + T++N L
Sbjct: 159 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGL 218
Query: 160 VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
++ + D + +F + P+V T + +I AL K ++ A +V M G++P+
Sbjct: 219 LREGQLDKAYSLFDAMLDRGPS-PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
+ +T+++ GY G + A +F + G PD TYT LMD K G+ T+A K+ D
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 337
Query: 280 EMEDNGVEPNEVTYGVMIE-----------------------------------AFCKGK 304
+ G +P+ TYG ++ A+ K
Sbjct: 338 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 397
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
K EA + +M Q+ P V+D+LC G+V+DA + L + P+ + +
Sbjct: 398 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 457
Query: 365 TIIH-------W----------------------------LCKEGKIWEAKKLFDEFERG 389
T+IH W LCK+G++ EAK LFD R
Sbjct: 458 TLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRI 517
Query: 390 SI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
I P+ TYNTLI G C ++ EA +L MV GV+P+ TYN +I G+ + G ++G
Sbjct: 518 GIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDG 577
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +L EM KG P ++ +L++GL+++G
Sbjct: 578 LTLLREMDGKGVNPGIVTYEMLLQGLFQAG 607
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 3/275 (1%)
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD-RGWVP-DATTYTVLMDG 264
VL MP +G P+L ++T +L G + A + + D +G P D YT +++G
Sbjct: 158 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 217
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
++ G+L A + D M D G P+ VTY +I A K + +A + M++ +P
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+ ++ C GK ++A ++K++ R PD + ++ +LCK GK EA+K+FD
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 337
Query: 385 EF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+RG P TY TL+ G L E L D M++KG++ +NM++ + K
Sbjct: 338 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 397
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
E + + M +G P+ ++ +++ L +G
Sbjct: 398 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAG 432
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 187/417 (44%), Gaps = 50/417 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+++ + R+ LD A +F P S + TY SII L++ +A D + T + +
Sbjct: 214 VINGLLREGQLDKAYSLFDAMLDRGP--SPDVVTYSSIISALSKTQAMDKATQVFTRMVK 271
Query: 107 NPEI-KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR- 164
N + C ++ +++ Y +G+P+ A+ F ++ + V+ V + L++ L +N +
Sbjct: 272 NGVMPDC--IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 329
Query: 165 --------------------------------------YDLVHLMFKNSRHKFKVVPNVF 186
+DL+ LM K ++ ++F
Sbjct: 330 TEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG---MQLGHHIF 386
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N+++ A K + V+ A+ V M G+ P++V + T+L G +++A F +
Sbjct: 387 --NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 444
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G P+ +T L+ G + ++ EM D G+ + + + ++ CK +
Sbjct: 445 KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRV 504
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA+NL D M++ P++ +ID C +GK+++A +L ++ P + +TI
Sbjct: 505 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 564
Query: 367 IHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
I+ + G+I + L E + +G P ++TY L+ G+ ++ A L+ M++
Sbjct: 565 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 225/504 (44%), Gaps = 75/504 (14%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL 116
+++ +Q F +A K N+ H+ TY ++I L + + ++ E+ +NP
Sbjct: 99 VNVKMQFFRWAAK-KRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPME 157
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+IR G A AV F +I+ Q + ++ N+++ L+ +Y+ VH ++
Sbjct: 158 LSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMS 217
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
++ P+ T + LI A CK + AIR+L+EM GM P +T ++ + ++
Sbjct: 218 NEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNV 277
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG--------------------------- 269
A +F ++ + PD TYT L+ G K G
Sbjct: 278 HGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNM 337
Query: 270 --------RLTDAVKVMDEM------------------------------------EDNG 285
RL DAVK+ +EM + +G
Sbjct: 338 INFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSG 397
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P+ TY ++I+ FCK ++ +A LL++M ++ + P A C +ID L + + + A
Sbjct: 398 ISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAH 457
Query: 346 ELWKRLLRKNCMPDNA-ISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAG 403
EL++ L ++NC +A + + +I L K G++ +A LFDE + G P++ YN L++G
Sbjct: 458 ELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSG 516
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + L EA M E G P++ +YN+++ G K G + +L M P+
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576
Query: 464 KTSFSLLIEGLYESGNEGEVGKVV 487
S++ ++ + +G E K++
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLM 600
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 51/403 (12%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+++ F+ N+ AL +F H + TY +I L +A FD + E+++
Sbjct: 267 LIALFFKLNNVHGALGLFEEMR--HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRR 324
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P+ N+ I G AGR + AVK F + SV + NT++ AL ++K
Sbjct: 325 EGCRPDTVVINNM----INFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESK 380
Query: 164 -RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
R + F+ + + P+ FT +ILI CK + E A+ +L+EM G P
Sbjct: 381 SRISEISSWFERMKGS-GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAA 439
Query: 223 HTTILG--GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
+ +++ G R DI A +F ++ + A Y V++ K GRL DAV + DE
Sbjct: 440 YCSLIDALGKAKRYDI--AHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDE 497
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G PN Y ++ SG AR G
Sbjct: 498 MNKLGCTPNVYAYNALM--------SGLAR---------------------------AGM 522
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNT 399
+++A +R+ C+PD + I++ L K G A ++ ++ +I P ++YNT
Sbjct: 523 LDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNT 582
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
++ M + EA +L +M G E ++ TY+ +++ K+
Sbjct: 583 VLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKV 625
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 204/366 (55%), Gaps = 6/366 (1%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +I + G E A++ + ++E + SV ++T++ ++ ++++ +F S
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES- 435
Query: 177 HKFKV-VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
F+ + NVF CN ++ LCK+ + A +L +M S G+ PN+V++ ++ G+ + +
Sbjct: 436 --FETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
++ A+ VF +IL++G P+ TY++L+DG + +A++V++ M + +E N V Y
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC-KVIDLLCEEGKVEDACELWKRLLRK 354
+I CK ++ +AR LL +M++ K + S + +ID +EG+++ A ++ +
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
P+ +++++ LCK ++ +A ++ DE + +G + Y LI G C+ + + A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L+ +++E+G+ P+ YN LI GF +GN + + ++ML G + +++ LI+G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 474 LYESGN 479
L + GN
Sbjct: 734 LLKDGN 739
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 182/383 (47%), Gaps = 38/383 (9%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A + ++E + +V S N ++ + K DL ++F N K + PN +T
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYT 515
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG------------------ 229
+ILI + D + A+ V++ M S + N V + TI+ G
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 230 ------------------YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ G++++A + ++ G P+ TYT LM+G K R+
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A+++ DEM++ GV+ + YG +I+ FCK A L ++L+ PS + +
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GS 390
I G + A +L+K++L+ D +T+I L K+G + A +L+ E + G
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+P + Y ++ G+ + + + +++++M + V PNV YN +I G + GN E R
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Query: 451 ILEEMLDKGCFPNKTSFSLLIEG 473
+ +EMLDKG P+ +F +L+ G
Sbjct: 816 LHDEMLDKGILPDGATFDILVSG 838
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 7/346 (2%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM-VPNLVTHTTILGGYVWRGDIENAKR 241
P+ ++ ++A CK D+ A +L EM + VP+ T+T+++ V +G++++A R
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ ++L G + T L+ G+ K L A+ + D+ME G PN VT+ V+IE F
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + +A M PS +I + K E+A +L+ + +
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVF 444
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +TI+ WLCK+GK EA +L + E RG P++++YN ++ G C + A ++ ++
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+EKG++PN +TY++LI G + + + + ++ M N + +I GL + G
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 481 GEVGKVVSMATASGS--VESDSWNFLLTRIV--SDLDSGAGALDEL 522
+ ++++ V S+N ++ ++DS A +E+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 208/487 (42%), Gaps = 66/487 (13%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-----RAFDAVESLLTEL 104
++ R+ N + AL+ +++A + +F + D + +IH L + RA D + ++
Sbjct: 79 LLNRRNNPEAALRFYNWARPWRGSF-EDGDVFWVLIHILVSSPETYGRASDLLIRYVSTS 137
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
P L K + F + + R+ N LLNA ++++
Sbjct: 138 NPTPMASV-------------------LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQ 178
Query: 165 YDLVHLM-FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D H + N + V+P N + AL +++ + A + M ++G+ + VT
Sbjct: 179 TD--HAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT 236
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDA---------------------------- 255
++ + A V ++RG PD+
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 256 --------TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
TYT ++ +K G + DA+++ DEM +G+ N V +I CK
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A L D M + P+S +I+ + G++E A E +K++ P TII
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
K K EA KLFDE FE G + ++ NT+++ +C+ + EA L M +G+
Sbjct: 417 QGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PNV +YN ++ G C+ N + +L+KG PN ++S+LI+G + + +E +V
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 487 VSMATAS 493
V+ T+S
Sbjct: 536 VNHMTSS 542
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 181/398 (45%), Gaps = 51/398 (12%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLAR----ARAFDAVESLLTELKQNP 108
RQ+N+DLA +F + N TY +I R A + V + +
Sbjct: 490 RQKNMDLARIVF--SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS----- 542
Query: 109 EIKCGENLFITVIRNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDL 167
I+ ++ T+I G+ A + IE+ + S S N++++ + D
Sbjct: 543 NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602
Query: 168 VHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL 227
++ + PNV T L+ LCK + ++ A+ + DEM + G+ ++ + ++
Sbjct: 603 AVAAYEEMCGN-GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 228 GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
G+ R ++E+A +F ++L+ G P Y L+ G+ LG + A+ + +M +G+
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
+ TY +I+ K +G + A EL
Sbjct: 722 CDLGTYTTLIDGLLK-----------------------------------DGNLILASEL 746
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCE 406
+ + +PD I + I++ L K+G+ + K+F+E ++ ++ P++L YN +IAG
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
L EA RL D+M++KG+ P+ T+++L+ G ++GN
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGN 842
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 217/447 (48%), Gaps = 36/447 (8%)
Query: 54 QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG 113
Q++ L+L+ F++ +P+ SH +T+ I+H L + R F + ES+L + ++ I
Sbjct: 92 QKDYVLSLEFFNWVATQNPS-SHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFP 150
Query: 114 ENLFITVIRNYGLA-GRPEL----------------AVKTFLRIEKFNVQRSVRSLNTLL 156
LF +++ +Y L P + A TF R++ + +V S N L
Sbjct: 151 SKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYL 210
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
++L+ R D+ L F + ++ PN +T N++I A CK ++ A V +EM +MG
Sbjct: 211 SSLLNFSRGDIA-LAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGF 269
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
PN+ ++ T++ GY +G + +A ++ + G PD T+ L++G+ K+G+L +A K
Sbjct: 270 SPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASK 329
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL-L 335
+ EM+ + P VTY ++I + K L ++M R V + L + L L
Sbjct: 330 LFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEM-SRFQVKADILTYNALILGL 388
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C+EGK + A L + L K +P+ + S +I+ C + + A +++ + S P
Sbjct: 389 CKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCD 448
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK-------- 446
T+ L++ CE+ + A +L ++M+ + P+V L G + G K
Sbjct: 449 QTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSE 508
Query: 447 -EGIRILEEMLDK----GCFP-NKTSF 467
E R+L E DK G P NK +F
Sbjct: 509 LEAQRLLPEGFDKLKAFGLLPDNKDAF 535
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 6/293 (2%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
NA F + D G++P + + + R A+ EM + + PN T +
Sbjct: 184 FRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNL 243
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I A CK + +A + ++M + P+ A +I C +G + A +L + ++ KN
Sbjct: 244 VICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKL-RSVMEKN 302
Query: 356 CMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEA 413
+P + ++ +T+++ CK GK+ EA KLF E + S+ P+ +TYN LI G ++
Sbjct: 303 GVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMG 362
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
RL+++M V+ ++ TYN LI G CK G K+ ++ E+ +KG PN ++FS LI G
Sbjct: 363 NRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYG 422
Query: 474 -LYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV--SDLDSGAGALDELL 523
+ +E SM +S + ++ LL+ D D L+E+L
Sbjct: 423 QCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEML 475
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ ++ + F KK A + M ++P+ C + L + + A ++ +
Sbjct: 171 FDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMR 230
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELT 411
R P++ + +I CK G++ +A +F+E G P++ +YNTLIAG C L+
Sbjct: 231 RSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLS 290
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A +L M + GV P+V T+N L+ GFCK+G +E ++ EM P ++++LI
Sbjct: 291 SAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILI 350
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESD--SWNFLL 505
G ++GN E+G + + V++D ++N L+
Sbjct: 351 NGYSKAGN-CEMGNRLFEEMSRFQVKADILTYNALI 385
>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 164/287 (57%), Gaps = 3/287 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NI + A CK +++ A+++L EM ++G+ P+ + +T ++ GY +GDI+NA++ F ++L
Sbjct: 404 NIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLK 463
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
PD TY +L G K G + + ++ MED G++PN +TYGV+I+ FC+G E
Sbjct: 464 ANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSE 523
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L + + ++ L ++ +G ++A L+ R+ ++ + D S +I
Sbjct: 524 AEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLIS 583
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLW-DDMVEKGVE 426
LC++G A + E+ +P L++Y+ LI+ C++ ++ A RLW DMV++G+
Sbjct: 584 DLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNA-RLWFHDMVQRGLP 642
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+V Y +L+ G+CKIG +E + +M G P+ ++++L++G
Sbjct: 643 VDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDG 689
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 175/375 (46%), Gaps = 26/375 (6%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMF 172
+ +I+ Y L G + A + F + K NV+ V + N L + L + + +DL+ M
Sbjct: 438 YTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHME 497
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ PN T ++I C+ D++ A + + + G+ V +++++ GY+
Sbjct: 498 DRG-----LQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLH 552
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+G +NA +F + +G + D + + L+ + G A V M + P+ ++
Sbjct: 553 KGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLIS 612
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I A+C+ AR DM+QR + +++ C+ G +++ACEL+ ++
Sbjct: 613 YSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMT 672
Query: 353 RKNCMPDNAISSTIIHWLCKEG--KIWEA--------------KKLFDEFERGSI-PSLL 395
PD + ++ KE + W+ +L + I P +
Sbjct: 673 SLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVP 732
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
Y LI G C+S L +A L+D+M++KG+ P+ + Y LI G+C G + + +EM
Sbjct: 733 CYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEM 792
Query: 456 LDKGCFPNKTSFSLL 470
+DKG P+ +FS+L
Sbjct: 793 VDKGIKPDVLTFSVL 807
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 173/385 (44%), Gaps = 16/385 (4%)
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+ E+ P++ G + FI GL G+ +LA I + VQ + N +++
Sbjct: 251 MIEMGVKPDVH-GHSSFII-----GLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDG 304
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE---MPSMG 215
L + R + V + +N + + P+++ + LI++ CK V ++VLD M S G
Sbjct: 305 LCKEMRLEEVEKLLENKVRQ-GLTPDIYGYSYLIRSYCK---VGNLLKVLDHYQAMVSHG 360
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ N + +L + G F D G D Y + MD Y KLG + +AV
Sbjct: 361 LEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAV 420
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K++ EM G+ P+ + Y +I+ +C AR ++ML+ P + L
Sbjct: 421 KLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGL 480
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL- 394
+ G V + +L + + P++ +I C+ + EA+ LF+ E I ++
Sbjct: 481 SKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIE 540
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+ Y++++ G A L+ + ++G + F+ + LI C+ GN++ +
Sbjct: 541 VLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCST 600
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGN 479
ML+K P+ S+S LI ++G+
Sbjct: 601 MLEKNDVPDLISYSKLISAYCQTGD 625
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 188/441 (42%), Gaps = 21/441 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ-----NPEI---------KCGEN---L 116
F H++ TY I+H L+ + + SL E+ PEI C + L
Sbjct: 96 FRHDFSTYAEIVHILSHSGQGRMLFSLFCEIVSPTSGGGPEIVPLMDQLKRTCTTSYPLL 155
Query: 117 FIT--VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
F T +I + F + + V V + N LL ++ ++V +
Sbjct: 156 FATNCLITACTTCCDARDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDE 215
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ F++ + + I+ ++L ++ + A +V EM MG+ P++ H++ + G G
Sbjct: 216 MKF-FRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECG 274
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
I+ A + +I+ +A + V+MDG K RL + K+++ G+ P+ Y
Sbjct: 275 KIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYS 334
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I ++CK + + M+ + + ++ + G E +++
Sbjct: 335 YLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDS 394
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEA 413
D + + + CK G + EA KL E G P + Y LI G C ++ A
Sbjct: 395 GLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNA 454
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
+ +++M++ V+P+V TYN+L G K G E ++ M D+G PN ++ ++I+G
Sbjct: 455 RQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDG 514
Query: 474 LYESGNEGEVGKVVSMATASG 494
N E + ++ G
Sbjct: 515 FCRGDNLSEAEVLFNIVEEKG 535
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 164/362 (45%), Gaps = 4/362 (1%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS-RHKFKVVPNVFT 187
+ + A K ++ + + V+ V ++ + L + + DL + + + R K +V F
Sbjct: 240 KADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAF- 298
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+++ LCK+ +E ++L+ G+ P++ ++ ++ Y G++ + ++
Sbjct: 299 -NVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMV 357
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G + + L+ + KLG + + + D+G+ + V Y + ++A+CK
Sbjct: 358 SHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMD 417
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA LL +M+ P +I C +G +++A + ++ +L+ N PD + +
Sbjct: 418 EAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILA 477
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L K G + E L E RG P+ LTY +I G C L+EA L++ + EKG++
Sbjct: 478 SGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGID 537
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
Y+ ++ G+ G + + +G ++ S S LI L GN V
Sbjct: 538 NIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTV 597
Query: 487 VS 488
S
Sbjct: 598 CS 599
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 217/489 (44%), Gaps = 70/489 (14%)
Query: 88 LARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQR 147
L AR +D V+ L+ E Q K LF T+I YG A E A++T K +
Sbjct: 5 LGAARRYDDVQRLV-ESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRP 63
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA--- 204
+ + ++++ ++ LM+K K K VP+ T NILI +L K D VE A
Sbjct: 64 TAYTYSSMIQVFMKGGDVQNGLLMYKQ-MLKAKFVPDHTTFNILIDSLAKADQVEEACNV 122
Query: 205 --------------------------------IRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+++ + M + G PNL T+ +++ +
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGS 182
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA------------------ 274
G ++ A +F ++ +G PDA TY +L+D + K G+L A
Sbjct: 183 AGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNS 242
Query: 275 --------------VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++ +M+ G+ NE+TY ++IE + + L +M+
Sbjct: 243 LLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND 302
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
V+D L + G+VE A EL++ + K D + +I+ L + GK+ A
Sbjct: 303 IKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAG 362
Query: 381 KLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L E E G P+++TYNTLI+ + + L+ A RL+ +M E+GV PNV +Y+ LI+GF
Sbjct: 363 ALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGF 422
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
K G I + EM +GC PN +++LLI+ L +G G + + +G
Sbjct: 423 GKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGK 482
Query: 500 SWNFLLTRI 508
LL RI
Sbjct: 483 VTKSLLVRI 491
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 152/357 (42%), Gaps = 44/357 (12%)
Query: 66 YAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRN 123
+ F N S + TY +I L DAV L + C NLF +V+
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQG---CQPNLFTYHSVMHA 179
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
+G AGR + A F ++ + +Q + N L++A + + + SR
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS----FT 235
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN----- 238
N T N L+ +L +K D++G + + +M + G+V N +T+ ++ W G +E+
Sbjct: 236 NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295
Query: 239 ------------------------AKRV------FGDILDRGWVPDATTYTVLMDGYIKL 268
A RV F D+ +G D TY +L++G +
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRA 355
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
G+L A ++ EME+NG PN +TY +I ++ K A L +M +R P+
Sbjct: 356 GKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+I+ + G+ + A L++ + + C P++ + +I L + G+ A + E
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLRE 472
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 4/253 (1%)
Query: 64 FHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRN 123
F + GK +F+ N TY+S++ L R + L ++K + E + +I
Sbjct: 225 FDFVGK-SRSFT-NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLV-SNELTYAILIER 281
Query: 124 YGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP 183
G AGR E + +L + +++ + ++N +L+ L + R + +F++ + K +
Sbjct: 282 LGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFK-GLNA 340
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ T NILI L + ++ A +L EM G PN++T+ T++ Y ++ A R+F
Sbjct: 341 DTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLF 400
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ +RG P+ +Y+ L++G+ K GR A+ + EM+ G PN VTY ++I+ +
Sbjct: 401 LEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRA 460
Query: 304 KKSGEARNLLDDM 316
+ G A L +M
Sbjct: 461 GRFGAAMEYLREM 473
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
M+ ++ + + L++ M + + + L +I + E +E A + ++
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAG 414
P S++I K G + ++ + + +P T+N LI + ++ ++ EA
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ DM + V P+V+TY +LI+ IG +++ E M +GC PN ++ ++
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLL 505
+G E + G ++ ++N L+
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILI 212
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 23/356 (6%)
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ + L NA K + L M +N + P+V+ LI + CK +E A D
Sbjct: 227 KVIGYLCNASKVEKAFQLFQEMKRNG-----IAPDVYVYTTLIDSFCKAGFIEQARNWFD 281
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
EM G PN+VT+T ++ Y+ + A V+ +L +G P+ TYT L+DG K G
Sbjct: 282 EMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAG 341
Query: 270 RLTDAVKVMDEMEDNGVE-----------------PNEVTYGVMIEAFCKGKKSGEARNL 312
++ A ++ M+ VE PN TYG +++ CK + EAR+L
Sbjct: 342 KIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDL 401
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M P+ + +ID C+ GK+++A E++ +L P+ S++I L K
Sbjct: 402 LKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFK 461
Query: 373 EGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ ++ A K+ + E P+++ Y +I G+C+ + EA +L M EKG PNV T
Sbjct: 462 DKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVT 521
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
Y +I GF K G ++ + +L++M KGC PN ++ +LI +G E K++
Sbjct: 522 YTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 192/401 (47%), Gaps = 22/401 (5%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR--YDLVHLMFK 173
+F +++ Y +G A K ++ + Q N L+ + ++ D++ L K
Sbjct: 114 IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK 173
Query: 174 NSRHKFK--VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
+ VV N + + LC E A V+ EM S G +P+ T++ ++G
Sbjct: 174 AYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLC 233
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+E A ++F ++ G PD YT L+D + K G + A DEME +G PN V
Sbjct: 234 NASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVV 293
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY +I A+ K +K +A + + ML + P+ +ID LC+ GK+E A +++K +
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353
Query: 352 LRKNC-MPD---------------NAIS-STIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
++N +PD N + ++ LCK ++ EA+ L G P+
Sbjct: 354 KKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPN 413
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+ Y+ LI G C++ +L EA ++ M+E G +PNV+TY+ LI K +++L
Sbjct: 414 HVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLS 473
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ML+ C PN ++ +I+GL + G E K++ M G
Sbjct: 474 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG 514
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 6/308 (1%)
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + VP+ +I LC+ E A+ L M + +PN++T+ +L G + + +
Sbjct: 34 EKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKL 93
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
KR+ ++ G P + L+ Y + G A K++ +M G +P V Y ++
Sbjct: 94 GRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNIL 153
Query: 297 IEAFCKGKKSGE-----ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
I C ++ G+ A +ML+ V + LC GK E A + + +
Sbjct: 154 IGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREM 213
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAEL 410
+ K +PD + S +I +LC K+ +A +LF E +R I P + Y TLI C++ +
Sbjct: 214 MSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFI 273
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+A +D+M G PNV TY LI + K + + E ML KGC PN +++ L
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTAL 333
Query: 471 IEGLYESG 478
I+GL ++G
Sbjct: 334 IDGLCKAG 341
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 195/458 (42%), Gaps = 63/458 (13%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
F + TY +I L A + L E+K+N P++ ++ T+I ++ AG
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVY----VYTTLIDSFCKAGFI 273
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK------------ 178
E A F +E+ +V + L++A +++++ + +++ K
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTAL 333
Query: 179 ---------------------------------FKVV------PNVFTCNILIKALCKKD 199
F+VV PNVFT L+ LCK
Sbjct: 334 IDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAY 393
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A +L M G PN V + ++ G G ++ A+ VF +L+ G+ P+ TY+
Sbjct: 394 QVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYS 453
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+D K RL A+KV+ +M +N PN V Y MI+ CK K+ EA L+ M ++
Sbjct: 454 SLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEK 513
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +ID + G+VE EL +++ K C P+ +I+ C G + EA
Sbjct: 514 GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEA 573
Query: 380 KKLFDEFERGSIPSLLT-YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL +E ++ P + Y +I G + E + L ++ E P Y +LI
Sbjct: 574 HKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVYRVLIDN 631
Query: 439 FCKIGNAKEGIRILEEMLDKGCF--PNKTSFSLLIEGL 474
F K G + + + EE+ F N+ LIE L
Sbjct: 632 FIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENL 669
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 44/232 (18%)
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M G +E T G + CK K EA +LL+ + ++VP + L K+I LCE
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASL 57
Query: 341 VEDACELWKRLLRKNCMPD-----------------------------------NAISST 365
E+A + R+ +C+P+ I ++
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAE-----LTEAGRLWDD 419
++H C+ G A KL + + G P + YN LI G+C S E L A + + +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
M+E GV N + + C IG ++ ++ EM+ KG P+ +++S +I
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI 229
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPS 393
LC+ GK +A L L ++ +PD + + +I LC+ EA S +P+
Sbjct: 20 LCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPN 76
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
+LTY L+ G +L R+ M+ +G P+ +N L+ +C+ G+ ++L+
Sbjct: 77 VLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLK 136
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+M+ GC P +++LI G+ S G+
Sbjct: 137 KMVQCGCQPGYVVYNILIGGICSSEEPGK 165
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 201/408 (49%), Gaps = 40/408 (9%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F+ N Y+ ++ L R F SLL E++QN
Sbjct: 138 FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQN-------------------------- 171
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ V S NT++ + K + L N ++ T ILI
Sbjct: 172 ----------SLMPDVVSYNTVIRGFCEGKELEKA-LQLANEMQGSGCSWSLVTWGILID 220
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
A CK ++ A+ +L EM G+ +L+ +T+++ G+ G+++ K +F ++L+RG P
Sbjct: 221 AFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
A TY L+ G+ KLGRL +A ++ + M + GV PN TY +I+ C K+ EA LL
Sbjct: 281 CAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ MLQ+ P+ +I+ LC++ V DA E+ + + ++ PDN ++++ LC +
Sbjct: 341 NLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAK 400
Query: 374 GKIWEAKKLFDEFERGSI---PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
G + EA KL + S P ++++N LI G+C+ L +A ++D +VEK ++
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIV 460
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
T N+L+ K G+ + + + +++ + PN +++ +I+G ++G
Sbjct: 461 TTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTG 508
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 147/290 (50%), Gaps = 1/290 (0%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
F N L+ L + + E A +M N V+ + +L +V A V
Sbjct: 73 FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLAL 132
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+L RG+ + Y +L+ G + AV ++ EM N + P+ V+Y +I FC+GK+
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+A L ++M S +ID C+ GK+++A L K + K D + ++
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252
Query: 366 IIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+I C G++ K LFDE ERG P +TYNTLI G C+ L EA +++ M+E+G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
V PNV+TY LI G C +G KE +++L ML K PN +++++I L
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKL 362
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 191/369 (51%), Gaps = 16/369 (4%)
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH--- 169
G NL T++R+ E+A + ++ + + + SL+ LL VQ ++ H
Sbjct: 75 GNNLMATLVRSR----NHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVL 130
Query: 170 -LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
LM K NV+ NIL+K LC+ + A+ +L EM ++P++V++ T++
Sbjct: 131 ALMLKRG-----FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G+ ++E A ++ ++ G T+ +L+D + K G++ +A+ ++ EM+ G+E
Sbjct: 186 GFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEA 245
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ + Y +I FC + + L D++L+R P + +I C+ G++++A E++
Sbjct: 246 DLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIF 305
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCES 407
+ ++ + P+ + +I LC GK EA +L + ++ P+++TYN +I +C+
Sbjct: 306 EFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKD 365
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF--PNKT 465
+ + +A + + M ++ P+ TYN L+ G C G+ E ++L ML + P+
Sbjct: 366 SLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 466 SFSLLIEGL 474
SF+ LI GL
Sbjct: 426 SFNALIHGL 434
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 190/400 (47%), Gaps = 13/400 (3%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
H + Y S+I D ++L E+ + + C + T+IR + GR
Sbjct: 240 HKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT-YNTLIRGFCKLGRL 298
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALV----QNKRYDLVHLMFKNSRHKFKVVPNVF 186
+ A + F + + V+ +V + L++ L + L++LM + PNV
Sbjct: 299 KEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEE-----PNVV 353
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T NI+I LCK V A+ +++ M P+ +T+ ++LGG +GD++ A ++ +
Sbjct: 354 TYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM 413
Query: 247 L-DRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
L D + PD ++ L+ G K RL A+ + D + + + VT +++ + K
Sbjct: 414 LKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSG 473
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+A L + K VP+S +ID C+ G + A L ++ P +
Sbjct: 474 DVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYN 533
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
++ LCK+G + +A +LF+E +R S P ++++N +I G ++ ++ A L M
Sbjct: 534 CLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHA 593
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
G+ P++FTY+ LI F K+G E I ++M+D G P+
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPD 633
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 145/316 (45%), Gaps = 8/316 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTF- 137
TY+S++ L D LL + ++ + + F +I R A+ +
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYD 448
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
L +EK V + N LLN+ +++ + ++K + K+VPN T +I CK
Sbjct: 449 LLVEKLGAGDIVTT-NILLNSTLKSGDVNKAMELWKQISNS-KIVPNSDTYTTMIDGFCK 506
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A +L +M + P++ + +L +G ++ A R+F ++ PD +
Sbjct: 507 TGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVIS 566
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ +++DG +K G + A ++ M G+ P+ TY +I F K EA + D M+
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMI 626
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC-KEGKI 376
+ P + +C V+ +G+ + E K+L+ K+ + D ++ T++ ++C G +
Sbjct: 627 DSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNM 686
Query: 377 WEAKKLF---DEFERG 389
AK+L D+ E G
Sbjct: 687 DIAKRLLRVADDKEEG 702
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 220/457 (48%), Gaps = 7/457 (1%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENL 116
DL + A F +N T+ ++I L A + DAV L +L + + E +
Sbjct: 124 DLGFSVL--AIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVH-LFKKLVRENICEPNEVM 180
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ TV+ G + A +E+ + + + R+ +++A ++ D + +
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMK 240
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
K + P++FT + LI ALCK E + EM + + PN+ T +++ G G +
Sbjct: 241 QK-SIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
E+A+ + ++++G PD TY +++DGY G++ A ++ D M + +EP+ ++Y ++
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I + + KK EA + ++ Q+ PS C ++ L E G+ + A + +L
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAELTEAGR 415
+PD T++ K G + EA F + ER ++ Y +I G+C++ +L +A
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++ + G+ P+V TY +I G+C+ G E +L +M D GC + ++++++ G
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539
Query: 476 ESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIVSD 511
S E+ + +A S S E+ + L+ I D
Sbjct: 540 RSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 140/309 (45%), Gaps = 43/309 (13%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLA 127
H N N T++S+I L + + E ++ + + +P++ + +I YGL
Sbjct: 276 HLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVIT----YNMIIDGYGLR 331
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A + F + +++ + S N L+N + K+ D + + K + P++ T
Sbjct: 332 GQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK-GLKPSIVT 390
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI- 246
CN+L+ L + + A DEM S G +P+L TH T+LGGY G +E A F +
Sbjct: 391 CNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450
Query: 247 -----------------------LDR-----------GWVPDATTYTVLMDGYIKLGRLT 272
LD+ G PD TYT ++ GY + G L
Sbjct: 451 RRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLD 510
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A ++ +MEDNG + TY V++ F + K E + L+++ + + +A ++
Sbjct: 511 EAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570
Query: 333 DLLCEEGKV 341
D++ E+ +
Sbjct: 571 DIIAEDPSI 579
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 136/274 (49%), Gaps = 5/274 (1%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +F ++ +P +++ L+ + + + V + E+ + +E +
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ + C ++ ++L ++ + +I L E KV+DA L+K+L+R+N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 356 -CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEA 413
C P+ + T+++ LCK+G +A L E+GS P+ TY +I C+ L A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L ++M +K + P++FTY+ LI CK+ + + EM+ +PN +F+ +I+G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292
Query: 474 LYESGNEGEVGKVVSMATASGSVESD--SWNFLL 505
L + G + +++ G V+ D ++N ++
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKG-VDPDVITYNMII 325
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 235/506 (46%), Gaps = 36/506 (7%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P + ++ R Q+ ++ F K N + Y I+H LA +R F +LL+E
Sbjct: 86 PHEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMNLLSE 145
Query: 104 LKQNPEIK----------------CGEN------LFITVIRNYGLAGRPELAVKTFLRIE 141
L Q E++ C E+ +F +I+ Y AG E + TF R
Sbjct: 146 LIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATFRRNI 205
Query: 142 KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK--NSRHKFKVVPNVFTCNILIKALCKKD 199
+ +V + N LL+ L R++ + + + + N +T NI+ LCK
Sbjct: 206 EACFIPNVIACNCLLSGL---SRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDG 262
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D + R LD+M G P+LVT+ T++ Y + +E+A ++ + RG +P+ T+T
Sbjct: 263 DTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHT 322
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VLM+G + G++ +A ++ +M G++P+ V+Y ++ +C+ K R+LL +M+
Sbjct: 323 VLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGN 382
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P S C +++ +GK+ A L R + +I LC EG+ + A
Sbjct: 383 GICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAA 442
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ + G +P + TYN L+ +C+ + EA L +MV++ + N+ Y +I
Sbjct: 443 RSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISC 502
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM----ATASG 494
C++ E +LEEM+ G P+ LI G E E +V K VS+ A
Sbjct: 503 LCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCE---ENKVDKAVSLLKFFANEFQ 559
Query: 495 SVESDSWNFLLTRIVSDLDSGAGALD 520
+++S+N + ++ D+ + A L+
Sbjct: 560 VYDTESYN-AVVKVFCDVGNVAELLE 584
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 163/385 (42%), Gaps = 45/385 (11%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N T++ + H L + D V L ++++ P++ + T++ +Y R E A
Sbjct: 247 NAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVT----YNTLVNSYCKKRRLEDA 302
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + V ++ + L+N L + + H +F H+ + P+V + N L+
Sbjct: 303 FYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHR-GIDPDVVSYNTLVS 361
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK-----------RV 242
C++ ++ +L EM G+ P+ VT I+ G+ G + +A ++
Sbjct: 362 GYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKI 421
Query: 243 FGDILDR------------------------GWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
D+ D G++P TY L++ K + +A+ +
Sbjct: 422 PEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILK 481
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM + N V Y +I C+ ++ EA LL++M+ +P + +I+ CEE
Sbjct: 482 SEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEE 541
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTY 397
KV+ A L K + + D + ++ C G + E +L D+ + G + + LT
Sbjct: 542 NKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTC 601
Query: 398 NTLIAGMCESAELTEAGRLWDDMVE 422
+I G+ ++ E + L DM+E
Sbjct: 602 KYVIHGLQKAME-QDDEMLGHDMLE 625
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 217/446 (48%), Gaps = 7/446 (1%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYH--SIIHKLARARAFDAVESLLTELKQNPEI 110
R ++ L L++F +A K +F+ D + S++ LAR R F VE+LL +K
Sbjct: 73 RIRDPGLGLKLFEWASK-RSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLA 131
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
E L V+ Y +G A++ + + + N V + N LLNAL+Q K+ ++
Sbjct: 132 PTREALSF-VVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIAR 190
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+++ + N C I+++ LCK+ VE +++++ G +PN+V + T++ G
Sbjct: 191 KVYEEMVKRDGCWDNYSVC-IMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDG 249
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
Y RGD+E A +F ++ +G++P TY ++++G K ++ EM++ GV+ N
Sbjct: 250 YWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVN 309
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
Y +++A K E L + + P +I C +GKV +A EL +
Sbjct: 310 VQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLE 369
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+++ P+ + +IH CK+GK A LF E+G L+ Y L+ G+ +
Sbjct: 370 HAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAG 429
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
E+ A + D MVE+GV P+ YN+L+ G CK G +L EML + + +
Sbjct: 430 EVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSA 489
Query: 469 LLIEGLYESGNEGEVGKVVSMATASG 494
L++G G E K+ + A G
Sbjct: 490 TLVDGFIRHGKLDEAKKLFELTIAKG 515
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 173/378 (45%), Gaps = 37/378 (9%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NTL++ + + + +FK + K +P T I+I LCKK + + +L EM
Sbjct: 244 NTLVDGYWKRGDVERANGLFKELKMK-GFLPTTETYGIMINGLCKKCNFKAVDGLLVEMK 302
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
G+ N+ + +I+ + G + I + G PD TTY L+ G + G++
Sbjct: 303 ERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVH 362
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL------------------- 313
+A ++++ G+ PN+++Y +I +CK K A +L
Sbjct: 363 EAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALV 422
Query: 314 ----------------DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
D M++R +P + + +++ LC++G++ A L +L +N
Sbjct: 423 HGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLS 482
Query: 358 PDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRL 416
D +S+T++ + GK+ EAKKLF+ +G P ++ YN +I G C+ + +A
Sbjct: 483 LDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTC 542
Query: 417 WDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
M + P+ FTY+ +I G+ K + +++ +M+ + C PN +++ LI G
Sbjct: 543 VQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCR 602
Query: 477 SGNEGEVGKVVSMATASG 494
+G+ K +SG
Sbjct: 603 TGDSSRAEKTFEEMRSSG 620
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 185/425 (43%), Gaps = 19/425 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I R E LL E + + + +I Y G+ A F+
Sbjct: 347 TYNTLISGSCRDGKVHEAEELL-EHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIG 405
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + + L++ LV D V L ++ + V+P+ N+L+ LCKK
Sbjct: 406 MTEKGHPLDLVAYGALVHGLVAAGEVD-VALTVRDKMVERGVLPDANVYNVLMNGLCKKG 464
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A +L EM + + T++ G++ G ++ AK++F + +G P Y
Sbjct: 465 RLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYN 524
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ GY K G + DA+ + M+D P+E TY +I+ + K A L M+++
Sbjct: 525 AMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQ 584
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
K P+ +I+ C G A + ++ + P+ + +I CKEGKI +A
Sbjct: 585 KCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKA 644
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMC------------ESAELTEAGRLWD---DMVEK 423
F+ IP+ +T+N LI G+ ES E+ +A + D M+
Sbjct: 645 CSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEI-KASLMMDFFRTMISD 703
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
G E V YN ++ C +++ ++M KG FP+ SF+ L+ GL G E
Sbjct: 704 GWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEW 763
Query: 484 GKVVS 488
+S
Sbjct: 764 KNTIS 768
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 189/427 (44%), Gaps = 60/427 (14%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIF-HYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
P +L L+ + +Q A +F K HP + Y +++H L A D
Sbjct: 378 PNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHP---LDLVAYGALVHGLVAAGEVDVA 434
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL--NTL 155
++ ++ + + N++ V+ N GL + L+ L +E + S+ + TL
Sbjct: 435 LTVRDKMVERGVLP-DANVY-NVLMN-GLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATL 491
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
++ +++ + D +F+ + K + P V N +IK CK + A+ + M
Sbjct: 492 VDGFIRHGKLDEAKKLFELTIAK-GMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGD 550
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P+ T++TI+ GYV + D+ NA ++FG ++ + P+ TYT L++G+ + G + A
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K +EM +G++PN VTY ++I FCK
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCK--------------------------------- 637
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC---------KEGKIWEAK-KLFDE 385
EGK+ AC ++ +L C+P++ + +I+ L K + E K L +
Sbjct: 638 --EGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMD 695
Query: 386 FERGSIPS-----LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
F R I + YN+++ +C + A +L D M KG+ P+ ++ L+ G C
Sbjct: 696 FFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLC 755
Query: 441 KIGNAKE 447
G +KE
Sbjct: 756 LEGRSKE 762
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 18/274 (6%)
Query: 239 AKRVFGDILDRG-------WVPDATTYTVLMDGYI--KLGRLTDAVKVMDEMED------ 283
A VF I D G W + + L+DG+ L +L +V E+E+
Sbjct: 67 AHFVFDRIRDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMK 126
Query: 284 -NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ-RKYVPSSALCCKVIDLLCEEGKV 341
+ P ++ A+ A L Y+P C +++ L ++ KV
Sbjct: 127 CKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKV 186
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTL 400
E A ++++ +++++ DN ++ LCKE K+ E +KL D + +G IP+++ YNTL
Sbjct: 187 EIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTL 246
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ G + ++ A L+ ++ KG P TY ++I G CK N K +L EM ++G
Sbjct: 247 VDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGV 306
Query: 461 FPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
N ++ +++ + G + EVGK + T +G
Sbjct: 307 DVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENG 340
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 191/365 (52%), Gaps = 11/365 (3%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
N+LL++ + + D V + K ++ V P V T IL+ L + D+ V DEM
Sbjct: 187 NSLLDSYTRQRNDDAVAGLLKEMENR-GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ ++ ++ ++ Y G++ A VF + + G P+ TY L++G+ K+G++
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG---KKSGEARNLLDDM-LQRKYVPSSALC 328
A ++ +M+ GV N++ + MI+ +C+ +K+ E + +++ M ++ + L
Sbjct: 306 AAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLA 365
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE- 387
C LC ++EDA +L + K P+ +T+I KEG + EA++LF + E
Sbjct: 366 CG----LCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEG 421
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+GS PS++TYN +I G ++ + EA R +M +KG+ P+++TY L+ G C G
Sbjct: 422 KGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDV 481
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS-WNFLLT 506
+R+ EEM +G PN +++ L+ GL + G E ++ A+G D+ ++ L+
Sbjct: 482 ALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVG 541
Query: 507 RIVSD 511
+ +D
Sbjct: 542 SLHTD 546
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 192/397 (48%), Gaps = 11/397 (2%)
Query: 84 IIHKLARARAFDAVESLLTELKQNP---EIKCGENLFITVIRNYGLAGRPELAVKTFLR- 139
++ ++ + D LL EL ++ C +L + R R + AV L+
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQ-----RNDDAVAGLLKE 208
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E V+ +V + L++ L + V ++ + K V +V+ + +I A C+
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAYCRGG 267
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+V A V DE G+ PN T+ ++ G+ G IE A+ + D+ RG + +
Sbjct: 268 NVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFN 327
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++DGY + G + A+++ ME G+E + TY + C+ + +A+ LL M ++
Sbjct: 328 TMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEK 387
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P+ +I + +EG + +A L++ + K P + +I K G I EA
Sbjct: 388 GVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREA 447
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++ E E+ G +P + TY L+ G C + ++ A RL+++M +G +PNV Y L+ G
Sbjct: 448 ERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSG 507
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
K G ++E ++ ++ML G P+ T +S+L+ L+
Sbjct: 508 LAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLH 544
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 3/357 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S++ R R DAV LL E+ +N ++ + ++ AG + +
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEM-ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEM 244
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
++ NV V + ++NA + +F V PN T LI CK
Sbjct: 245 KRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECV-GHGVEPNERTYGALINGFCKIGQ 303
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +L +M G+ N + T++ GY G +E A + + G D TY
Sbjct: 304 IEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNT 363
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L G ++ R+ DA K++ M + GV PN V+Y +I K EAR L DM +
Sbjct: 364 LACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
PS +ID + G + +A K + +K +PD + ++H C GK+ A
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+LF+E + RG+ P+++ Y L++G+ + EA +L+DDM+ G+ P+ Y++L+
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 35/325 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++ L+RA VE++ E+K+ + + VI Y G A + F
Sbjct: 220 TYTILVDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAYCRGGNVRRASEVFDE 278
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN--------------------SRH-- 177
V+ + R+ L+N + + + ++ + RH
Sbjct: 279 CVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGM 338
Query: 178 ------------KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
K + +++T N L LC+ + +E A ++L M G+ PN V++TT
Sbjct: 339 VEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTT 398
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ + GD+ A+R+F D+ +G P TY V++DGYIK G + +A + EME G
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ P+ TY ++ C K A L ++M R P+ ++ L +EG+ E+A
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWL 370
+L+ +L PD+ + S ++ L
Sbjct: 519 QLYDDMLAAGLTPDDTLYSVLVGSL 543
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+S ++ CK G + +A L DE R + + YN+L+ L +M
Sbjct: 151 ASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEME 210
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+GVEP V TY +L+ G + G+ + + +EM K + +S +I GN
Sbjct: 211 NRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
L+ + ++ G C+S + +A L D++ GV N YN L+ + + N +L+E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
M ++G P ++++L++GL +G+ +V V
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAV 240
>gi|357483069|ref|XP_003611821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513156|gb|AES94779.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 177/330 (53%), Gaps = 4/330 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++R+Y G E A+++F R+ +F ++ NT+L V N++ + L + K
Sbjct: 89 ALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRD-VLNEKLLELALALYTTMLK 147
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V PN +T N+LI CK+ +V+GA +LDEM +G+VP +++ T+IL G +++
Sbjct: 148 SNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDE 207
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++F D+ + + PD + V+++G+ K+GRL +A+ + ++++G N +Y +I
Sbjct: 208 AHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLIN 267
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
AF K ++ EA M + VP L +I L +EG+V +A ++ + + + P
Sbjct: 268 AFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTP 327
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
D+ + +I LC + A+ L E ++ T+ LI MC+ + EA L++
Sbjct: 328 DSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNV---CTHTILICEMCKRGMVAEAQELFN 384
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
M + G EP+V T+N LI G CK N ++
Sbjct: 385 QMEKLGCEPSVVTFNTLINGLCKAKNLEKA 414
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 188/444 (42%), Gaps = 74/444 (16%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
FS N ++Y S+I+ +AR + + T++ + P++ L+ +IR GR
Sbjct: 255 FSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVV----LYAIMIRGLSKEGRV 310
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH----LMFKNSRHKFKVVPNVF 186
A K + + + N ++ L DL++ L + S H NV
Sbjct: 311 GEAAKMLEEMTQIGLTPDSYCYNAVIQGLCD---VDLLNRAQSLSLEISEH------NVC 361
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T ILI +CK+ V A + ++M +G P++VT T++ G ++E AK +F +
Sbjct: 362 THTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKL 421
Query: 247 -------------LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G V D+ + G++ A K++ ++ V+P+ +TY
Sbjct: 422 EVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGE-VKPDIITY 480
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPS--SALCCKVIDLLCEEGKVEDACELWKRL 351
+++ A C ++ A N + LQ+K PS + +I L + ++A ++++R+
Sbjct: 481 NILLNALCMDREVNAAYNFFE-FLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRM 539
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS------------------ 393
+ P ++ T++ LC++ K+ A L+ E + S+PS
Sbjct: 540 QKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLK-SLPSRDNDSISTLEKYLFGEKL 598
Query: 394 ------------------LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
L Y L+ G C++ +++EA + + E ++ N + L
Sbjct: 599 EQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHL 658
Query: 436 IQGFCKIGNAKEGIRILEEMLDKG 459
I+G CK + ++I L+KG
Sbjct: 659 IRGLCKEQRLHDAVKIFLYSLEKG 682
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ + + N LLNAL ++ + + F+ + K P+ T +IK L D + A
Sbjct: 473 VKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEA 532
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+V M G P L + T++ + + A ++ + L D + + L +
Sbjct: 533 FKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTL-EK 591
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
Y+ +L ++ + E++ + Y +++ FC+ K EA +L + + +
Sbjct: 592 YLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKIN 651
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ C +I LC+E ++ DA +++ L K M I + ++ L
Sbjct: 652 ATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCL 697
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 208/438 (47%), Gaps = 45/438 (10%)
Query: 84 IIHKLARARAFDAV-ESLLTELKQNPEIKCG--ENLFITVIRNYGLAGRPELAVKTFLRI 140
I +LAR A + E + LK+ +C + + ++I + AG + A+ + +
Sbjct: 56 IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ ++ + N L+NA + KR D V +F+ +++ PNV T +ILI A+CK
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQ-NCSPNVITYSILIDAVCKCGG 174
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
VE A++V +M S G PN+ T+T+++ G G ++ A +F ++ G V Y
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT---------------------------- 292
L+ G + GR A K+ EM G++P+ VT
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 293 -------YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
Y V+I+ CK K+ EA + ++ + VP ++D LC+ G++ DA
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGM 404
L + R C PD + +T+I L K G++ EA +L E + G P ++TYNTLI
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDES 414
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL----EEMLDKGC 460
C+ + +A RL++++ KG N TYN ++ G C G E ++ +E +D
Sbjct: 415 CKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVI 473
Query: 461 FPNKTSFSLLIEGLYESG 478
P+ +++ L+ G ++G
Sbjct: 474 DPDFVTYTTLLNGARQAG 491
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 197/423 (46%), Gaps = 41/423 (9%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
+FI + R Y AG E +V+ R+E + + N+L++A V+ Y L
Sbjct: 56 IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAG-YTQKALAVYRV 114
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + P+ +T N+L+ A K V+ ++ +EM + PN++T++ ++ G
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+E A +VF D+ RG P+ TYT ++DG K G + A + +EM G+ V Y
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSA----------------------------- 326
+I + ++ A L +ML + P
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 327 ------LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
L +ID LC+ ++++A E++ L +PD + ++ LCK G+I +A
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 381 KLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + +R G P + YNTLI G+ +S + EAG+L +M G EP+V TYN LI
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDES 414
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV---VSMATASGSV 496
CK G ++ +R+ EE+ KG F N +++ ++ GL +G E K+ + T G +
Sbjct: 415 CKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVI 473
Query: 497 ESD 499
+ D
Sbjct: 474 DPD 476
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 207/434 (47%), Gaps = 25/434 (5%)
Query: 16 LQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFS 75
L+ + G RC+L+ I + + Y ++ AL ++ G+
Sbjct: 77 LKRMEGHRCALTASAYNSLIDAFVKAGYTQK-------------ALAVYRVMGQ--SGLR 121
Query: 76 HNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELA 133
+ T++ +++ +A+ D+V L E++ C N+ + +I G E A
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQ---NCSPNVITYSILIDAVCKCGGVEKA 178
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+K FL ++ + ++ + ++++ L ++ D +F+ + V V N LI
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV-VYNSLIH 237
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
L + + A ++ EM S G+ P+ VT T+++ G G A+R+F + D G
Sbjct: 238 GLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCAL 297
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D Y VL+D K RL +A ++ E+E++G+ P+ T+ +++ CK + +A LL
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
DM + P + +ID L + G+VE+A +L + PD +T+I CK
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM----VEKGVEPNV 429
G+I +A +LF+E + +TYNT++ G+C + + EA +L++ M V+ ++P+
Sbjct: 418 GRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDF 477
Query: 430 FTYNMLIQGFCKIG 443
TY L+ G + G
Sbjct: 478 VTYTTLLNGARQAG 491
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 220/433 (50%), Gaps = 19/433 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F HN DT+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHNRDTHLKIIEILGRALKLNHARCILLDMPKKG-LEWDEDMWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG AG + +VK F ++E+ V+R+++S + L +++ R+ + F N
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N+LI V+ A R ++M S + P++VT+ T++ G ++ A
Sbjct: 145 GIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ R P +YT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C K EA+++L +M+ + P +++ ++I CE G + A ++ K ++R +
Sbjct: 265 LCDAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ +A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDIILRPQSTLHMEPS--AYNPMIEYLCNN 382
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L +++ GV+ + N LI+G + G+ +L+ ML + K+++
Sbjct: 383 GQTAKAEALVRQLLKLGVQDST-ALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 468 SLLIEGLYESGNE 480
L++ Y NE
Sbjct: 442 DSLVQS-YLKKNE 453
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 208/446 (46%), Gaps = 14/446 (3%)
Query: 72 PNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE 131
P +S Y + H L+ R SLLT NP G++ + RN A +
Sbjct: 14 PFYSKTQKHYSNSSHGLSHNR------SLLTFSNSNPNHDNGKSFSSSGARNLQ-ATTTD 66
Query: 132 LAVKTFLRIEKFNVQ--RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
A+ T R + R + L + + +HL+ R + P+V C
Sbjct: 67 AAIPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYN--PDVILCT 124
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LIK +V A+RV++ + G P++ + ++ G+ I++A RV + +
Sbjct: 125 KLIKGFFTLRNVPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSK 183
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
+ PD TY +++ G+L A+KV+D++ + +P +TY ++IEA EA
Sbjct: 184 DFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEA 243
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
LLD+ML R P +I +C+EG V+ A E+ + L K C PD + ++
Sbjct: 244 LKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRA 303
Query: 370 LCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
L +GK E +KL + F P+++TY+ LI +C ++ EA L M EKG+ P+
Sbjct: 304 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 363
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
++Y+ LI FC+ G I LE M+ GC P+ +++ ++ L ++G + ++
Sbjct: 364 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 423
Query: 489 MATASG-SVESDSWNFLLTRIVSDLD 513
G S S S+N + + + S D
Sbjct: 424 KLGEVGCSPNSSSYNTMFSALWSSGD 449
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 190/405 (46%), Gaps = 47/405 (11%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-----HLMFKN 174
+I + R + A + R+ + + N ++ +L + DL L+ N
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ P V T ILI+A + V+ A+++LDEM S G+ P++ T+ TI+ G G
Sbjct: 220 CQ------PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++ A + ++ +G PD +Y +L+ + G+ + K+M +M +PN VTY
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
++I C+ K EA NLL M ++ P + +I C EG+++ A E + ++
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF---------------------------- 386
C+PD +T++ LCK GK +A ++F +
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453
Query: 387 --------ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
G P +TYN++I+ +C + +A L DM P+V TYN+++ G
Sbjct: 454 LHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
FCK ++ I +L+ M+ GC PN+T++++LIEG+ +G E
Sbjct: 514 FCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEA 558
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 180/387 (46%), Gaps = 7/387 (1%)
Query: 73 NFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRP 130
+FS + TY+ +I L D +L +L + C + + +I L G
Sbjct: 184 DFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSD---NCQPTVITYTILIEATMLEGGV 240
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
+ A+K + ++ + + NT++ + + D M +N K P+V + NI
Sbjct: 241 DEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELK-GCEPDVISYNI 299
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L++AL + E +++ +M S PN+VT++ ++ G IE A + + ++G
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PDA +Y L+ + + GRL A++ ++ M +G P+ V Y ++ CK K+ +A
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ + + P+S+ + L G A + ++ PD +++I L
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479
Query: 371 CKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+EG + +A +L + PS++TYN ++ G C++ + +A + D MV G PN
Sbjct: 480 CREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNE 539
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEML 456
TY +LI+G G E + + +++
Sbjct: 540 TTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 10/313 (3%)
Query: 80 TYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
TY++II + + RAF+ + +L ELK N+ + + N G+ E K
Sbjct: 261 TYNTIIRGMCKEGMVDRAFEMIRNL--ELKGCEPDVISYNILLRALLN---QGKWEEGEK 315
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++ +V + + L+ L ++ + + + K + K + P+ ++ + LI A
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAF 374
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C++ ++ AI L+ M S G +P++V + T+L G + A +FG + + G P++
Sbjct: 375 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 434
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
++Y + G A+ ++ EM NG++P+E+TY MI C+ +A LL D
Sbjct: 435 SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVD 494
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M ++ PS V+ C+ ++EDA ++ ++ C P+ + +I + G
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGY 554
Query: 376 IWEAKKLFDEFER 388
EA +L ++ R
Sbjct: 555 RAEAMELANDLVR 567
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 222/433 (51%), Gaps = 19/433 (4%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ F + + + F H+ +T+ II L RA + +L ++ + ++ E++++
Sbjct: 28 ALQFFRWVERSNL-FEHDRETHLKIIEILGRASKLNHARCILLDMPKKG-LEWDEDMWVL 85
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+I +YG AG + +VK F ++E+ V+R+++S + L +++ R+ + F N
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYF-NKMLSE 144
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ P T N++I ++ A+R ++M S + P++VT+ T++ G ++ A
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEA 204
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
++ F ++ + P TYT L+ GY+ + ++ DA+++++EM+ G++PN +TY ++
Sbjct: 205 EKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 300 FCKGKKSGEARNLLDDMLQRKYVP-SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
C K EA+++L +M+ + P +++ ++I CE G ++ A ++ K ++R +
Sbjct: 265 LCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPT 324
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-----------PSLLTYNTLIAGMCES 407
+ +I CK G+ A KL D+ I PS YN +I +C +
Sbjct: 325 EAGHYGVLIENFCKAGQHDRAVKLLDKLIEKDIILRPQSTLHMEPS--AYNPMIEYLCSN 382
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ +A L +++ GV+ + N LI+G+ + G+ +L+ ML + K+++
Sbjct: 383 GQTAKAEALVRQLLKLGVQ-DTTALNTLIRGYAQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 468 SLLIEGLYESGNE 480
L++ Y NE
Sbjct: 442 DALVQS-YLKKNE 453
>gi|359496226|ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 5/351 (1%)
Query: 51 IFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
I+R++NL +Q F + + F Y + +LA A+ F +E +L E K+ +I
Sbjct: 33 IYRERNLKRLVQKFKKSSELD-RFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDI 91
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
E + +I YG +G + A K F + +RSV S N LL A V +K++D V
Sbjct: 92 -SREGFAVRLITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEG 150
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F K V P++ + NI+I LC ++ A+ +LDEM + P+L+T T+L G
Sbjct: 151 FFSELPSKLSVEPDLVSYNIVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGC 210
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G + ++++G + + +PD +Y + G + R+ + + +++EM+ G++P+
Sbjct: 211 YTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDG 270
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
++ +I+ FC K EA N M + +P ++ L CE+G + A EL K
Sbjct: 271 YSFNALIKGFCNDGKVDEATNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKE 330
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLI 401
+ + C+ D + + L K GK+ EAKKL + G+ S YN I
Sbjct: 331 IFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKL---VQLGNSNSYRRYNLKI 378
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 8/267 (2%)
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ V + W +I ++ + DI G+ T Y K G A
Sbjct: 60 GIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITL------YGKSGMFDHA 113
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV-PSSALCCKVID 333
KV DEM D E + +++ ++ A KK + ++ + V P VI+
Sbjct: 114 FKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIN 173
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
LC+ G ++ A + + +K+ PD +T+++ G+ + +K++ E+ +I P
Sbjct: 174 GLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILP 233
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ +YN + G+ + E L ++M KG++P+ +++N LI+GFC G E
Sbjct: 234 DIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWY 293
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGN 479
+M + C P+K +F+ L+ E G+
Sbjct: 294 GKMRENDCLPDKLTFATLVPLYCEKGS 320
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN-GVEP 288
Y G ++A +VF ++ D+ ++ L+ + + E+ VEP
Sbjct: 104 YGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEP 163
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V+Y ++I C A +LD+M ++ P +++ G+ D ++W
Sbjct: 164 DLVSYNIVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIW 223
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCES 407
R+ +KN +PD + + L E ++ E L +E + +G P ++N LI G C
Sbjct: 224 GRMEKKNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCND 283
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
++ EA + M E P+ T+ L+ +C+ G+ + + +E+ ++ C ++
Sbjct: 284 GKVDEATNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLL 343
Query: 468 SLLIEGLYESGNEGEVGKVVSMATAS 493
++GL + G E K+V + ++
Sbjct: 344 QNAVDGLVKGGKVVEAKKLVQLGNSN 369
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 1/308 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F + K + V+ N LI CK + A DEM G+ P +VT+T+++ GY
Sbjct: 249 FLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYC 308
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G+ A +V+ ++ +G P+ T+T ++ G + + +A+++ EM++ + P+EV
Sbjct: 309 NEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV 368
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY VMIE C+ EA +LLD+M+ + +VP + +I LC G+V +A E L
Sbjct: 369 TYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDL 428
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL 410
+ + +N S ++H CKEG+ +A ERG L+ Y LI G +
Sbjct: 429 HKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDT 488
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
L +M G+ P+ Y +I K GN KE + + M+D+GC PN +++ L
Sbjct: 489 RALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTAL 548
Query: 471 IEGLYESG 478
I GL ++G
Sbjct: 549 INGLCKAG 556
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 172/345 (49%), Gaps = 11/345 (3%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
N+ VR+L+ LLN L++ +R++ V L+F + V P+++ + ++++LC+ D
Sbjct: 91 NLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSA-NVQPDIYIYSAVVRSLCELKDFNK 149
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A ++ M ++V + ++ G I A + ++ +G + TY
Sbjct: 150 AKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY----- 204
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ +A + EM + G+ N +TY ++I++FC+ + A LD M +
Sbjct: 205 ----YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEF 260
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ +I+ C+ G A + ++ K P +++I C EG+ +A K++
Sbjct: 261 TVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVY 320
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
+E +G P+ T+ +I+G+C + + EA RL+ +M E+ + P+ TYN++I+G C+
Sbjct: 321 NEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRS 380
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
GN E +L+EM+ KG P+ ++ LI GL G E + V
Sbjct: 381 GNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFV 425
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 36/392 (9%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ ++I Y G A K + + + + + +++ L + +F +
Sbjct: 300 YTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMK 359
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
+ K++P+ T N++I+ C+ ++ A +LDEM G VP+ T+ ++ G G +
Sbjct: 360 ER-KIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRV 418
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
AK D+ + Y+ L+ GY K GR DAV M + GV + V Y ++
Sbjct: 419 SEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAIL 478
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I+ + + LL +M P + + +ID + G +++A LW ++ + C
Sbjct: 479 IDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGC 538
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKL-------------------FDEFERGS------- 390
+P+ + +I+ LCK G + +A+ L D RG
Sbjct: 539 LPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQ 598
Query: 391 ---------IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ + ++YN LI G C ++ EA +L M + + P+ TY+ +I CK
Sbjct: 599 LHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCK 658
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
N +E I++ MLDKG P+ ++S L+ G
Sbjct: 659 RSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHG 690
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 167/393 (42%), Gaps = 4/393 (1%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAV 134
S N T+ +II L RA L E+K+ +I E + +I + +G A
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEMKER-KIMPSEVTYNVMIEGHCRSGNISEAF 387
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ + L++ L R F + HK N + L+
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAK-EFVDDLHKDHHKLNNMCYSALVHG 446
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK+ + A+ M G+ +LV + ++ G D + ++ + G PD
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
A YT ++D + K G L +A + D M D G PN VTY +I CK +A L
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSK 566
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
+ L P+ +D L G +E A +L +L K + + +I C+ G
Sbjct: 567 ETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLG 625
Query: 375 KIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
KI EA KL I P +TY+T+I C+ + L EA +LW M++KG++P+ Y+
Sbjct: 626 KIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYS 685
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
L+ G C G ++ + +EM+ +G N +
Sbjct: 686 FLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 30/259 (11%)
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
M+D + P T ++ + ++ + L DD++ P + V+ LCE
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW----------------------- 377
A E+ + C + + +IH LCK +IW
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206
Query: 378 ---EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
EA+ LF E E+G + +TY+ LI C E+ A D M + +E V+ YN
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
LI G+CK+GNA +EM+DKG P +++ LI G G + KV + TA
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326
Query: 494 GSVESDSWNFLLTRIVSDL 512
G + +++ F T I+S L
Sbjct: 327 G-ISPNTYTF--TAIISGL 342
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 218/437 (49%), Gaps = 13/437 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDAVESLLTEL 104
+VS I Q +D +++ + P+F D +Y++++ L A+ +D VE L+ E+
Sbjct: 184 VVSAICEQGCVDEGVELL----RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEM 239
Query: 105 KQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ + C N+ F T+I G E + ++ + +R T+++ + ++
Sbjct: 240 VR---VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKD 296
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+++ + + + + + PNV N ++K LC + E A +L EM + VT
Sbjct: 297 GHHEVANDIL-SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 355
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
++ + G ++ + +L+ G +PD TYT +++G+ K G + +AV ++ M
Sbjct: 356 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 415
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G +PN ++Y ++++ C+ ++ +A+ L+ M+Q+ +P+ +I+ +C++G VE
Sbjct: 416 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVE 475
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLI 401
A EL K++L C PD ST+I L K GK EA +L + +G P+ + Y+++
Sbjct: 476 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMA 535
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
+ + + +++D + + V + YN +I CK I M+ GC
Sbjct: 536 SALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCM 595
Query: 462 PNKTSFSLLIEGLYESG 478
PN++++++LI GL G
Sbjct: 596 PNESTYTILIRGLASEG 612
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 198/437 (45%), Gaps = 16/437 (3%)
Query: 82 HSIIHKLARARAF-DAVESLLTELKQNPEIKCGE-NLFITVIRNYGLAGRPELAVKTFLR 139
H I+ R F AV +L + + G NL ++ I G V+ +
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDE---GVELLRK 203
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ F + + S N +L L KR+D V LM + R PNV T N LI LC+
Sbjct: 204 LPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR--VGCPPNVATFNTLIAYLCRN 261
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
E L +MP G P+L + TI+ G G E A + + G P+ Y
Sbjct: 262 GLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCY 321
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
++ G R +A ++ EM ++VT+ ++++ FC+ LL+ ML+
Sbjct: 322 NTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+P VI+ C+EG V++A L K + C P+ + ++ LC+ + +
Sbjct: 382 HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVD 441
Query: 379 AKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A++L ++G +P+ +T+NTLI MC+ + +A L M+ G P++ +Y+ +I
Sbjct: 442 AQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 501
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM--ATASGS 495
G K G +E + +L M++KG PN +S + L EG K++ M + +
Sbjct: 502 GLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL---SREGRTDKIIQMFDSIQDAT 558
Query: 496 VESDSWNFLLTRIVSDL 512
V SD+ L ++S L
Sbjct: 559 VRSDAA--LYNAVISSL 573
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 188/389 (48%), Gaps = 15/389 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAV 134
N T++++I L R F+ V L+++ PE C +L + T+I G E+A
Sbjct: 247 NVATFNTLIAYLCRNGLFEQVHEALSQM---PEHGCTPDLRMYATIIDGICKDGHHEVAN 303
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVVPNVFTCNI 190
R+ + ++ +V NT+L L +R+ DL+ MF+ V T NI
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV-----TFNI 358
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
L+ C+ V+ I +L++M G +P+++T+TT++ G+ G ++ A + ++ G
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ +YT+++ G + R DA +++ M G PN VT+ +I CK +A
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
LL ML P VID L + GK E+A EL ++ K P+ I S++ L
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538
Query: 371 CKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
+EG+ + ++FD + ++ S YN +I+ +C+ E A + MV G PN
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TY +LI+G G +E +L E+ +
Sbjct: 599 STYTILIRGLASEGLVREAQDLLSELCSR 627
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 151/315 (47%), Gaps = 1/315 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V PN +T ++++LC + + A+ VLDEMP G IL G +A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R + +G D+ +++ + G + + V+++ ++ G EP+ V+Y +++
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K+ + L+ +M++ P+ A +I LC G E E ++ C PD
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +TII +CK+G A + G P+++ YNT++ G+C + EA L +
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M ++ + T+N+L+ FC+ G I +LE+ML+ GC P+ +++ +I G + G
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403
Query: 480 EGEVGKVVSMATASG 494
E ++ +A G
Sbjct: 404 VDEAVMLLKNMSACG 418
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 110/269 (40%), Gaps = 36/269 (13%)
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS------------ 306
+ L+ GR DA + +D D V Y MI +C+ +
Sbjct: 48 SALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQVAAARRLAAAVPV 104
Query: 307 --------------------GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
+A +LD+M R + +C +++ C G A
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
+ L K C D+ + ++ +C++G + E +L + G P +++YN ++ G+C
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ + L +MV G PNV T+N LI C+ G ++ L +M + GC P+
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284
Query: 466 SFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ +I+G+ + G+ ++S + G
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYG 313
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
S +I LC G+ +A + D G ++ YN +IAG C + ++ A RL +
Sbjct: 48 SALIRSLCAAGRTADAARALDT--AGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV--- 102
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
V PN +TY +++ C G + + +L+EM +GC +++E G
Sbjct: 103 PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162
Query: 484 GKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ + + A G +++S + N +++ I +D G L +L C
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGC 209
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 173/371 (46%), Gaps = 55/371 (14%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD---------- 235
F ++++ LCK V+ A R+LD+MP G+ N + + ++L YV + D
Sbjct: 132 FAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 191
Query: 236 -------------------------IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
I + +F ++ V D YT +++ Y + G
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ A KV+DE NGVEPNE TYGV+I+ FCK + A LL DM + + +
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311
Query: 331 VIDLLCEEGKVEDACELWKR-------------------LLRKNCMPDNAISSTIIHWLC 371
+ID C +G V+DA ++ L R +P+ +T+I C
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K+G + EA++LF E E+G+ PS+LTY+ +I G + + EA R +M +KG P+V+
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
TY L+ G C G +++ EEM +G PN +++ LI GL + G ++
Sbjct: 432 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 491
Query: 491 TASGSVESDSW 501
+G + DS
Sbjct: 492 LKAGLIPDDSL 502
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 168/337 (49%), Gaps = 18/337 (5%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ +V + L+++L + V +F N VV +V+ +I A C+
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALF-NEMKANNVVGDVYLYTAVINAYCRAG 250
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A +VLDE G+ PN T+ ++ G+ G +E A+ + D+ +G + +
Sbjct: 251 NMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 310
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++DGY + G + DA+K+ ME GVE N TY + C+
Sbjct: 311 TMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCR----------------M 354
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP+ +I + C++G + +A L++ + K P S +IH K+G+I EA
Sbjct: 355 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREA 414
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
++ E E+ G +P + TY +L+ G C + ++ A +L+++M ++G EPNV Y LI G
Sbjct: 415 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 474
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
K G ++ ++ ++ML G P+ + +S L+ L+
Sbjct: 475 LAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLH 511
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 21/310 (6%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++ L+ AR VE+L E+K N + L+ VI Y AG A K
Sbjct: 203 TYTILVDSLSTARDISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLDE 261
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
V+ + R+ L+ + + + ++ + + + V N N +I C+K
Sbjct: 262 CVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQ-GVGLNQIIFNTMIDGYCRKG 320
Query: 200 DVEGAIRVLDEMPS-------------------MGMVPNLVTHTTILGGYVWRGDIENAK 240
V+ A+++ M MG+VPN VT+TT++ + GD+ A+
Sbjct: 321 MVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEAR 380
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R+F ++ ++G P TY+V++ GY K GR+ +A + EME G P+ TY ++
Sbjct: 381 RLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGH 440
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C K A L ++M QR P+ +I L +EG+ E A +L+ +L+ +PD+
Sbjct: 441 CVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDD 500
Query: 361 AISSTIIHWL 370
++ S ++ L
Sbjct: 501 SLYSALVGSL 510
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 18/259 (6%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +I + +A E LL ++ Q + + +F T+I Y G + A+K
Sbjct: 270 NERTYGVLIKGFCKIGQMEAAEMLLADM-QGQGVGLNQIIFNTMIDGYCRKGMVDDALKI 328
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+EK V+ ++ + NTL L + VVPN T LI C
Sbjct: 329 KAAMEKIGVELNIYTYNTLACGLC-----------------RMGVVPNYVTYTTLISIHC 371
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K D+ A R+ EM G P+++T++ ++ GY +G I A+R ++ +G+VPD
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ G++ A+K+ +EM+ G EPN V Y +I K +S A L DDM
Sbjct: 432 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 491
Query: 317 LQRKYVPSSALCCKVIDLL 335
L+ +P +L ++ L
Sbjct: 492 LKAGLIPDDSLYSALVGSL 510
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 370 LCKEGKIWEAKKLFDEFERGSIP---SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + G++ +A L E GS P S + ++ G+C+S + +A RL DDM GV
Sbjct: 105 LRRAGRLADAAGLL-ERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVS 163
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
N YN L+ + + + ILE M ++G ++++L++ L
Sbjct: 164 LNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSL 211
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 246/557 (44%), Gaps = 56/557 (10%)
Query: 1 MLRHLH-QKITAPSCLLQSIGGARCSLSTITVTP---------PIKPWPQRLYPKRLVSM 50
ML H + A + LL ++ ARCS ++ V IK P L+
Sbjct: 42 MLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGC 101
Query: 51 IFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
R L F K + + ++ L A+ D +L L++ PE
Sbjct: 102 FCRMGRLKHGFAAFGLILKTGWRVNDTV-IFSQLLKGLCDAKRVDEATDIL--LRRMPEF 158
Query: 111 KCGENLFITVIRNYGLAG--RPELAVKTFLRIEK---FNVQRSVRSLNTLLNALVQNKRY 165
C ++F I G R E A++ + + +V + T+++ L + +
Sbjct: 159 GCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMV 218
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
D +F++ K V PN T LI + +++L EM + G+ P+ +
Sbjct: 219 DRAKGVFQHMIDK-GVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAV 277
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
+L G A+ +F ++ +G P+ T Y +L+ GY G L++ +D M NG
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNG 337
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
V P+ + +M A+ K EA ++ D M Q++ P+ +ID LC+ G+V+DA
Sbjct: 338 VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAV 397
Query: 346 ELWKRLLRKNCMPDNAISSTIIH-------W----------------------------L 370
+ +++ + PD + S++++ W L
Sbjct: 398 LKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNL 457
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+EG++ EA++L D R G P +++YNTL+ G C + + EA +L D +V G++P+
Sbjct: 458 CREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDK 517
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VS 488
TYN L+ G+CK + + EML KG P+ +++ ++ GL+++G E ++ +S
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577
Query: 489 MATASGSVESDSWNFLL 505
M + + ++N ++
Sbjct: 578 MINSRTQMNIYTYNIII 594
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 218/449 (48%), Gaps = 26/449 (5%)
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
LL L +N N+F +VIR G+ +P + + L + + + S+ +++ L+ +
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRK-GI--KPNVTIYGIL-LHGYATEGSLSEMHSFLDLM 333
Query: 160 VQN---KRYDLVHLMF---------KNSRHKF------KVVPNVFTCNILIKALCKKDDV 201
V N + + ++MF + H F ++ PN+ T LI ALCK V
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRV 393
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
+ A+ ++M GM P++ ++++ G E A+ +F ++LD+G D + L
Sbjct: 394 DDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
M + GR+ +A +++D M GV P+ ++Y +++ C + EA LLD ++
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
P ++ C+ +++DA L++ +L K PD +TI+H L + G+ EAK+
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573
Query: 382 LF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L+ + ++ TYN +I G+C++ + EA +++ + K ++ ++FT N++I
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDS 500
K G ++ + + + G P+ ++ L+ E L + G+ E+ ++ S +G+ +
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693
Query: 501 WNFLLTRIV---SDLDSGAGALDELLVKN 526
L R + D++ L +L KN
Sbjct: 694 MLNALVRWLLHRGDINRAGAYLSKLDEKN 722
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 2/298 (0%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N L+ LC++ V A R++D M +G+ P+++++ T++ G+ G I+ A ++ I+
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS 510
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G PD TY L+ GY K R+ DA + EM G+ P+ VTY ++ + + E
Sbjct: 511 IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A+ L M+ + + +I+ LC+ V++A +++ L K+ D ++ +I
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIG 630
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G+ +A LF G +P + TY + + + L E L+ M E G P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAP 690
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
N N L++ G+ L + LD+ F + S + ++ +Y G ++ K
Sbjct: 691 NSRMLNALVRWLLHRGDINRAGAYLSK-LDEKNFSLEASTTSMLISIYSRGEYQQLAK 747
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY++++H +AR D SL E+ P++ + T++ GR A +
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVT----YNTILHGLFQTGRFSEAKEL 574
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+L + Q ++ + N ++N L +N D MF + K + ++FT NI+I AL
Sbjct: 575 YLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK-DLQLDIFTANIMIGALL 633
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K E A+ + + + G+VP++ T+ I + G +E +F + + G P++
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
L+ + G + A + ++++ T ++I + +G+ A++L
Sbjct: 694 MLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T++ + L GR + A K I ++ + NTLL+ + +R D + +F+ K
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK 546
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ P+V T N ++ L + A + M + N+ T+ I+ G ++
Sbjct: 547 -GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDE 605
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++F + + D T +++ +K GR DA+ + + G+ P+ TY ++ E
Sbjct: 606 AFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAE 665
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
K E L M + P+S + ++ L G + A +L KN
Sbjct: 666 NLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSL 725
Query: 359 DNAISSTII 367
+ + +S +I
Sbjct: 726 EASTTSMLI 734
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 220/473 (46%), Gaps = 25/473 (5%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSII--HKLARARAFDAVESLLTELKQN--------- 107
LAL+ + K P N+ T+ I H L +AR + +S+L L Q
Sbjct: 34 LALKFLKWVIK-QPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFG 92
Query: 108 ------PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
P +F +IR Y G AV TF + + SV + N ++ ++V+
Sbjct: 93 VLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVK 152
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
N R LV FK +V PNV + NILI LC + ++ A+ +L M G VP +V
Sbjct: 153 NCRAHLVWSFFKQMLTS-RVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIV 211
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
++ T+L +G + A + + +G D TY + +D + R V+ +M
Sbjct: 212 SYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM 271
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ + PNEV+Y +I F K K G A + ++M++ P+ +I+ C G
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNT 399
E+A + + + P+ T+++ L K K A+ + + + R S+ + +++
Sbjct: 332 EEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL-NCISHTV 390
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
+I G+C + L EA +L +M + GV P++ T+++LI GFCK+GN + ++ ++ +G
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDL 512
PN FS LI + GN E K + +G ++ NF +V+ L
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNG---QNADNFTCNSLVASL 500
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 203/431 (47%), Gaps = 41/431 (9%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
N+ I+V+ + G+ + AV +E+ ++ S NTLL+ + R+ ++ +
Sbjct: 179 NILISVL---CVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
K + +V T N+ I +LC+ VL +M + + PN V++ T++ G+V G
Sbjct: 236 MECK-GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEG 294
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
I A RVF ++++ P+ TY +L++GY G +A++V+D ME N V PNEVT G
Sbjct: 295 KIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIG 354
Query: 295 -----------------------------------VMIEAFCKGKKSGEARNLLDDMLQR 319
VMI+ C+ EA LL +M +
Sbjct: 355 TLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKD 414
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +I+ C+ G + A E+ ++ R+ +P+N I ST+I+ CK G ++EA
Sbjct: 415 GVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEA 474
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K + G T N+L+A +CE+ +L EA + G+ PN T++ +I G
Sbjct: 475 MKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING 534
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVE 497
+ +G+ + + M+ G P+ ++ L++ L + N E K++ + +V+
Sbjct: 535 YANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVD 594
Query: 498 SDSWNFLLTRI 508
+ S+N L+ I
Sbjct: 595 TISYNTLIVEI 605
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 7/334 (2%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
FTCN L+ +LC+ + A L + +G+VPN VT I+ GY GD A VF
Sbjct: 491 FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDR 550
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ G P TY L+ K +A K++ ++ + + ++Y +I K
Sbjct: 551 MISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGN 610
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L ++M+Q +P S ++ L EG++ A RL++K + N+I T
Sbjct: 611 LLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYT 670
Query: 366 -IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
I L K G+ A LF E E+G L+ N++ G ++ A L K
Sbjct: 671 CFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNK 730
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
V PN+ T+N+L+ G+ + + ++ M G FPN+ ++ LI GL G E+
Sbjct: 731 NVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGML-EL 789
Query: 484 G-KVVSMATASGSVESD-SWNFLLTRI--VSDLD 513
G K++ M A S D ++N L+ + ++DLD
Sbjct: 790 GIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 219/488 (44%), Gaps = 60/488 (12%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L++ ++ + +A ++F+ + N S N TY+ +I+ F+
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIEL--NLSPNLITYNILINGYCINGNFEEAL 335
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN----- 153
+L ++ N +++ E T++ + + ++A +E++ + R+ SLN
Sbjct: 336 RVLDVMEAN-DVRPNEVTIGTLLNGLYKSAKFDVARNI---LERYCINRT--SLNCISHT 389
Query: 154 TLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+++ L +N + + L+ M K+ H P++ T ++LI CK ++ A V+
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVH-----PDIITFSVLINGFCKVGNINKAKEVMS 444
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF-------------------------G 244
++ G VPN V +T++ G++ A + + G
Sbjct: 445 KIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENG 504
Query: 245 DILDR----------GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+++ G VP++ T+ +++GY +G + A V D M G P+ TYG
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYG 564
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ CKG+ EAR LL + + +I + + G + +A L++ +++
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN 624
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSL--LTYNTLIAGMCESAELTE 412
N +PD+ + I+ L +EG++ A + I +L + Y I G+ ++ +
Sbjct: 625 NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKA 684
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A L+ +M EKG+ ++ N + G+ ++G ++ + +K PN T+F++L+
Sbjct: 685 ALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLH 744
Query: 473 GLYESGNE 480
G Y G +
Sbjct: 745 G-YSRGQD 751
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 171/396 (43%), Gaps = 2/396 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY I+ L R L L Q + ++ I AG+ + A+ F
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKE 691
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ + + +LN++ + + + + +R+K V+PN+ T NIL+ +
Sbjct: 692 MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNK-NVIPNLTTFNILLHGYSRGQ 750
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D+ ++ + M G PN +T+ +++ G G +E ++ + D T+
Sbjct: 751 DIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFN 810
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L+ ++ L + + ME V ++ T + + + S + +ML++
Sbjct: 811 MLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKK 870
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
++P+S C ++ +C G ++ A +L +++ D+A ++ L GKI EA
Sbjct: 871 GFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEA 930
Query: 380 KKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ R IP+ T+ TL+ C+ EA L M V+ ++ YN+LI
Sbjct: 931 MWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISA 990
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
C G+ + EE+ KG PN T++ +L+ +
Sbjct: 991 CCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 177/422 (41%), Gaps = 38/422 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S++ L + + F LL +L P + + T+I +G AV+ F
Sbjct: 562 TYGSLLKVLCKGQNFWEARKLLKKLHCIP-LAVDTISYNTLIVEISKSGNLLEAVRLFEE 620
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPN--VFTCNILIKALCK 197
+ + N+ + +L+ L++ R + K + N V+TC I L K
Sbjct: 621 MIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTC--FIDGLFK 678
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A+ + EM G+ +L+ +I GY G + +A + ++ +P+ TT
Sbjct: 679 AGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTT 738
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG-------------- 303
+ +L+ GY + + K+ + M +G PN +TY +I C
Sbjct: 739 FNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFI 798
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC---ELWKRLLRKNCMPDN 360
+S +L +ML RK CC++ DL KV D E+++ L K+
Sbjct: 799 AESSTIDDLTFNMLIRK-------CCEINDL----DKVIDLTHNMEVFRVSLDKD--TQK 845
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
A++ ++ + + ++ ++G IP+ Y T++ MC ++ A +L D M
Sbjct: 846 AVTDVLVRRMVSQNYFVFMHEM---LKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQM 902
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
V G+ + +++G G +E + IL+ ML P ++F+ L+ + N
Sbjct: 903 VALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNF 962
Query: 481 GE 482
E
Sbjct: 963 KE 964
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
++R L G+ E A+ R+ + + + TL++ + + H + K
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL-KILMEH 974
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG-----YVWR 233
++V ++ N+LI A C DV A+ +E+ G++PN+ T+ ++ YV R
Sbjct: 975 YRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSR 1034
Query: 234 GDIENAKRVFGDILDRGWV 252
G+I V D+ DRG V
Sbjct: 1035 GEI-----VLKDLNDRGLV 1048
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 42/214 (19%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
+ Q++V + L+ +V + +H M K +P ++K +C+ D++G
Sbjct: 842 DTQKAVT--DVLVRRMVSQNYFVFMHEMLKKG-----FIPTSKQYCTMMKRMCRVGDIQG 894
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
A ++ D+M ++G+ + ++ G G IE A + +L +P +T+T LM
Sbjct: 895 AFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMH 954
Query: 264 GY--------------------IKL---------------GRLTDAVKVMDEMEDNGVEP 288
+ +KL G + A+ +E++ G+ P
Sbjct: 955 VFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLP 1014
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
N TY V++ A +L D+ R V
Sbjct: 1015 NMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 178 KFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
+ K +P T L+ CKKD+ + A + M + ++V + ++ GD+
Sbjct: 939 RMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVI 998
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A + +I +G +P+ TTY VL+ ++ V+ ++ D G ++
Sbjct: 999 TALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRG----------LV 1048
Query: 298 EAFCKGKKSGEARNLL 313
+ GK R+ +
Sbjct: 1049 SGYLDGKSQKSCRDFV 1064
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 17/319 (5%)
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ LC E A +V+ EM G VP+ T++ ++G +ENA +F ++ G V
Sbjct: 462 RCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVV 521
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TYT+L+D + K G + A +DEM +G EP VTY +I A+ K KK A L
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD------------- 359
+ M+ + P+ +ID C+ G +E AC+++ R+ +PD
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641
Query: 360 --NAIS-STIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGR 415
N ++ ++ LCK K+ +A+ L + F G P+ + Y+ LI G C++A+L EA
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++ MVE G PNV+TY+ LI K +++L +ML+ C PN ++ +I+GL
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761
Query: 476 ESGNEGEVGKVVSMATASG 494
+ E K++ M G
Sbjct: 762 KVAKTDEAYKLMLMMEEKG 780
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 183/372 (49%), Gaps = 18/372 (4%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ E A K + + + ++ L R + +FK + VVP+V+T
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT-GVVPDVYT 526
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
ILI K ++ A LDEM G P +VT+TT++ Y+ + A +F ++
Sbjct: 527 YTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMI 586
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM---------------EDNGVE-PNEV 291
+G P+ TYT L+DGY K G + A ++ M ++N E PN V
Sbjct: 587 AKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVV 646
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TYG +++ CK K +AR+LL+ M P++ + +ID C+ K+++A E++ ++
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAEL 410
+ P+ S++I L K+ ++ K+ + E P+++ Y +I G+ + A+
Sbjct: 707 VEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
EA +L M EKG +PNV TY +I GF K G + + + EM KGC PN ++++L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Query: 471 IEGLYESGNEGE 482
I +G+ E
Sbjct: 827 INHCCATGHLDE 838
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 211/486 (43%), Gaps = 46/486 (9%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAF 94
++ + Q+L P +V ++ ++ +L ++ F +AG+ + H Y +++ R
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGR-QIGYDHTPAVYIALLDVFERGSYD 187
Query: 95 DAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNT 154
E L E++ + + G+ L +IR G +A++ R++ F + + + N
Sbjct: 188 RVPEEFLREIRGDDKEVLGK-LLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNA 246
Query: 155 LLNALVQNKRYDLVHLMFKN------SRHKFKV-------------------------VP 183
L+ ++ + D L+ + S +F + VP
Sbjct: 247 LVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVP 306
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I LC+ E A+ L+ M S +PN+ T+ +L G + + + KR+
Sbjct: 307 NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRIL 366
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G P T + L+ Y K + A K++ +ME +P V Y ++I + C G
Sbjct: 367 SMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSG 426
Query: 304 KKSGE---------ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
GE A ++ML V + LC GK E A ++ ++
Sbjct: 427 ---GELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEA 413
+PD + S +I +LC ++ A LF E + G +P + TY LI ++ + +A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+MV G EP V TY LI + K + E M+ KGCFPN +++ LI+G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 474 LYESGN 479
+SGN
Sbjct: 604 YCKSGN 609
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 17/308 (5%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P V T LI A K V A + + M + G PN++T+T ++ GY G+IE A ++
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 243 FGDILDRGWVPDA----------------TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ + +PD TY L+DG K ++ DA +++ M +G
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
EPN + Y +I+ FCK K EA+ + M++ Y P+ +ID L ++ +++ +
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLK 736
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMC 405
+ ++L +C P+ I + +I L K K EA KL E +G P+++TY +I G
Sbjct: 737 VLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
++ ++ + L+ +M KG PN TY +LI C G+ E +LEEM + +
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856
Query: 466 SFSLLIEG 473
S+ +IEG
Sbjct: 857 SYCKVIEG 864
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 3/275 (1%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PNV T L+ LCK V+ A +L+ M G PN + + ++ G+ ++ A+ V
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F +++ G+ P+ TY+ L+D K RL +KV+ +M +N PN V Y MI+ K
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EA L+ M ++ P+ +ID + GKV+ EL++ + K C P+
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I+ C G + EA L +E ++ P + +Y +I G E + L +++
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVE 880
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+ G P + Y +LI F K G + + + +E++
Sbjct: 881 KNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVI 915
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 165/358 (46%), Gaps = 19/358 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAV 134
N TY +++ L +A LL + + C N + +I + A + + A
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVD---GCEPNTIVYDALIDGFCKAAKLDEAQ 700
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV----HLMFKNSRHKFKVVPNVFTCNI 190
+ F ++ + +V + ++L++ L ++KR DLV M +NS PN+
Sbjct: 701 EVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS-----CAPNIVIYTE 755
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
+I L K + A +++ M G PN+VT+T ++ G+ G ++ +F ++ +G
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
P+ TYTVL++ G L +A +++EM+ + +Y +IE + ++ +
Sbjct: 816 CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSL 873
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK--NCMPDNAISSTIIH 368
LL+++ + P L +ID + G++E A EL K ++ + + +++I+
Sbjct: 874 GLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIY 933
Query: 369 WLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
KI A +LF D G IP L T+ L+ G+ EA +L D + + +
Sbjct: 934 SFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 4/164 (2%)
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSL 394
C G A E RL P + ++ + K+ A+ + E E G
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
T +C+ + EA L + ++ PN YN +I G C+ +E + L
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNR 333
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
M C PN ++ +L+ G G +++SM A G S
Sbjct: 334 MRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPS 377
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 228/492 (46%), Gaps = 23/492 (4%)
Query: 35 IKPWPQRLYPKRLVSMIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
IK L +++ ++ R Q N AL F++ K+ + + Y IIH LA +R
Sbjct: 93 IKELIPHLGHRQISKILLRCQSNFVSALAFFNWV-KYDLDIRLSSHNYCLIIHILAWSRQ 151
Query: 94 FDAVESLLTELKQNPE------------IKCGEN------LFITVIRNYGLAGRPELAVK 135
F L+EL + + + C E+ +F +I+ Y +
Sbjct: 152 FPLAMKFLSELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYW 211
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+F ++ K +V + N +LN L + K D + V N +T NIL L
Sbjct: 212 SFKKMVKLGFVPNVIACNCILNGLAKMKS-DAQCWELYEEMGRIGVHSNAYTFNILTYVL 270
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ DV L++M G P++VT+ T++ YV RG +E+A ++ + RG +PD
Sbjct: 271 CRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDL 330
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+YT LM G +LGR+ +A ++ M D G++P+ V Y +I A+CK EAR+LL +
Sbjct: 331 VSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHE 390
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+ P S C +++ EG++ A L + + + I +I LC+E +
Sbjct: 391 MIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDR 450
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ AK L + S P YN LI C S ++EA L +M+ + +P TY
Sbjct: 451 PFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKS 510
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK-VVSMATAS 493
LI C+I + +G ++ EM++ P+ L+ G + GN + +VS A
Sbjct: 511 LIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDF 570
Query: 494 GSVESDSWNFLL 505
+S+S+N L+
Sbjct: 571 QFFDSESFNSLV 582
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI +LC++D A +L+ + P+ + ++ + ++ A + ++++R
Sbjct: 441 LIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRN 500
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ P TY L+ ++ R D +M EM ++ V P+ ++ +CK + +A
Sbjct: 501 YKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAE 560
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+LL Q S ++ + + G EL R+L+ +P++ IIH
Sbjct: 561 SLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIH-- 618
Query: 371 CKEGKIWEAKKL 382
IW++ +L
Sbjct: 619 ----GIWKSMRL 626
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 228/492 (46%), Gaps = 23/492 (4%)
Query: 35 IKPWPQRLYPKRLVSMIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
IK L +++ ++ R Q N AL F++ K+ + + Y IIH LA +R
Sbjct: 89 IKELIPHLGHRQISKILLRCQSNFVSALAFFNWV-KYDLDIRLSSHNYCLIIHILAWSRQ 147
Query: 94 FDAVESLLTELKQNPE------------IKCGEN------LFITVIRNYGLAGRPELAVK 135
F L+EL + + + C E+ +F +I+ Y +
Sbjct: 148 FPLAMKFLSELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYW 207
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+F ++ K +V + N +LN L + K D + V N +T NIL L
Sbjct: 208 SFKKMVKLGFVPNVIACNCILNGLAKMKS-DAQCWELYEEMGRIGVHSNAYTFNILTYVL 266
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ DV L++M G P++VT+ T++ YV RG +E+A ++ + RG +PD
Sbjct: 267 CRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDL 326
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+YT LM G +LGR+ +A ++ M D G++P+ V Y +I A+CK EAR+LL +
Sbjct: 327 VSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHE 386
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+ P S C +++ EG++ A L + + + I +I LC+E +
Sbjct: 387 MIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDR 446
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ AK L + S P YN LI C S ++EA L +M+ + +P TY
Sbjct: 447 PFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKS 506
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK-VVSMATAS 493
LI C+I + +G ++ EM++ P+ L+ G + GN + +VS A
Sbjct: 507 LIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDF 566
Query: 494 GSVESDSWNFLL 505
+S+S+N L+
Sbjct: 567 QFFDSESFNSLV 578
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 150/379 (39%), Gaps = 84/379 (22%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELA 133
N T++ + + L R + + L ++++ +P++ + T+I +Y GR E A
Sbjct: 255 NAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVT----YNTLIDSYVRRGRLEDA 310
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + V + S +L+ L + R H +F + + P+V N LI
Sbjct: 311 FYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR-GMDPDVVLYNTLIG 369
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA-------------- 239
A CK ++ A +L EM +G+ P+ T ++ GY G + +A
Sbjct: 370 AYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTV 429
Query: 240 ---------------------KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
K + IL+ + PD+ Y L++ + + +++A+ +
Sbjct: 430 AHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLK 489
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
EM + +P TY +I C+ +S + L+ +M++ + +P +C +++ C+E
Sbjct: 490 LEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKE 549
Query: 339 GKVEDA-----------------------------------CELWKRLLRKNCMPDNAIS 363
G + A EL R+L+ +P++
Sbjct: 550 GNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTC 609
Query: 364 STIIHWLCKEGKIWEAKKL 382
IIH IW++ +L
Sbjct: 610 RYIIH------GIWKSMRL 622
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 216/435 (49%), Gaps = 23/435 (5%)
Query: 41 RLYPKRLVSMIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
L P R+ ++ + Q++ L+L+ F++ +P+ SH +T+ I+H L + R F + E
Sbjct: 56 HLTPFRVKHILLKIQKDHVLSLEFFNWVQTENPS-SHTLETHSMILHILTKNRKFKSAEL 114
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLA-GRPEL----------------AVKTFLRIEK 142
+L + I + LF ++ +Y + P + A TFL+++
Sbjct: 115 ILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKG 174
Query: 143 FNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
+ +V S N L++L+ R D+ +K R + ++ PNV+T N++++A CK +E
Sbjct: 175 YGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMR-RCRISPNVYTRNMVMRAFCKSGKLE 233
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A++V +EM S+G+ PN ++ T++ GY +G + +A ++ + +G + T+ L+
Sbjct: 234 KAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLI 293
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
DG+ K G+L +A KV EM+ V PN +TY +I + S R L ++M R V
Sbjct: 294 DGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEM-SRNGV 352
Query: 323 PSSALCCKVIDL-LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
+ L + L LC+EGK + A + K L ++N +P+ + S +I C A +
Sbjct: 353 KADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQ 412
Query: 382 LFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
L+ R G P+ T+N L++ C++ + A + +M E+ P + + G C
Sbjct: 413 LYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLC 472
Query: 441 KIGNAKEGIRILEEM 455
G +++ E+
Sbjct: 473 CCGKEHLAMKLSSEL 487
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 1/268 (0%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
V+R + +G+ E AV+ F +E + + S NTL+ + + + KNS
Sbjct: 222 VMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSA-VKLKNSMRAK 280
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V NV T N LI CK+ + A +V EM + + PN +T+ T++ G+ G+ E
Sbjct: 281 GVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMG 340
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+R++ ++ G D TY L+ G K G+ A ++ E++ + PN T+ +I
Sbjct: 341 RRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISG 400
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C S A L M++ P+ ++ C+ E A + + + P
Sbjct: 401 QCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPG 460
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ + S I H LC GK A KL E +
Sbjct: 461 SDVLSEIYHGLCCCGKEHLAMKLSSELK 488
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
NA F + G++P + + + L R+ A+ EM + PN T +
Sbjct: 162 FRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNM 221
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
++ AFCK GK+E A ++++ +
Sbjct: 222 VMRAFCKS-----------------------------------GKLEKAVQVFEEMESVG 246
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
P++ +T+I C++G + A KL + +G +++T+N+LI G C+ +L EA
Sbjct: 247 ISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEAS 306
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+++ +M V PN TYN LI G ++GN++ G R+ EEM G + +++ LI GL
Sbjct: 307 KVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGL 366
Query: 475 YESGNEGEVGKVV 487
+ G + +V
Sbjct: 367 CKEGKTKKAAYMV 379
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + E R I P++ T N ++ C+S +L +A +++++M G+ PN +YN LI
Sbjct: 200 ALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIM 259
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
G+C+ G +++ M KG N +F+ LI+G + G E KV S
Sbjct: 260 GYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFS 310
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 7/280 (2%)
Query: 42 LYPKRLVSMIF-RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+Y + +V F + L+ A+Q+F S N +Y+++I R ++ L
Sbjct: 216 VYTRNMVMRAFCKSGKLEKAVQVFEEMESV--GISPNDTSYNTLIMGYCRKGLLNSAVKL 273
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
++ ++ F ++I + G+ A K F ++ NV + + NTL+N
Sbjct: 274 KNSMRAKG-VEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHS 332
Query: 161 QNKRYDLVHLMFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
Q ++ +++ SR+ K ++ T N LI LCK+ + A ++ E+ +VPN
Sbjct: 333 QMGNSEMGRRLYEEMSRNGVKA--DILTYNALILGLCKEGKTKKAAYMVKELDKENLVPN 390
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
T + ++ G R + + A +++ ++ G P+ T+ +L+ + K A V+
Sbjct: 391 ASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLM 450
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
EM + P + C K A L ++ R
Sbjct: 451 EMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKAR 490
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G +P++ + N ++ + + + A + +M + PNV+T NM+++ FCK G ++
Sbjct: 176 GFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKA 235
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
+++ EEM G PN TS++ LI G G K+ + A G VE++ F
Sbjct: 236 VQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKG-VEANVVTF 289
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 175/338 (51%), Gaps = 5/338 (1%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
+L LV+ K Y + + K + PN+ T NILI C + + VL ++ +
Sbjct: 71 ILGYLVKMKHYPTAISLSRQMEVK-GIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKL 129
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G P+ +T T++ G +G+++ + ++ +G+ + +Y L++G K+G A
Sbjct: 130 GYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 189
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
VK++ +ED P+ V Y +I+ CK K +A + +M R P+ +I
Sbjct: 190 VKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWG 249
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS- 393
C G++ A L ++ KN P+ + +I LCKEGK+ EAKKL E P+
Sbjct: 250 FCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPAD 309
Query: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453
++TYN+++ G+C+S L +A L+ M + G++PN +TY LI G CK G K ++ +
Sbjct: 310 VVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQ 369
Query: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+L KGC + +++++I GL + EG K ++M +
Sbjct: 370 HLLVKGCCIDVRTYNVMISGLCK---EGMFDKALAMKS 404
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 161/313 (51%), Gaps = 1/313 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N L+K LC K +V+ ++ D++ + G N V++ T+L G G+ A ++
Sbjct: 133 PDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKL 192
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
I DR PD Y+ ++DG K + A EM G+ PN +TY +I FC
Sbjct: 193 LRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCL 252
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A +LL++M+ + P+ +ID LC+EGKV++A +L + K D
Sbjct: 253 AGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVT 312
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++ LCK + +A LF + ++ I P+ TY LI G+C+ L A +L+ ++
Sbjct: 313 YNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLL 372
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEG 481
KG +V TYN++I G CK G + + + +M D GC PN +F ++I L+E
Sbjct: 373 VKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDEND 432
Query: 482 EVGKVVSMATASG 494
+ K++ A G
Sbjct: 433 KAEKLLHGMIAKG 445
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 1/244 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V + +I LCK V A EM + G+ PN++T++T++ G+ G + A +
Sbjct: 203 PDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSL 262
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+++ + P+ TY +L+D K G++ +A K++ EM G + VTY +++ CK
Sbjct: 263 LNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCK 322
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ +A L M + P+ +ID LC+ G++++A +L++ LL K C D
Sbjct: 323 SQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRT 382
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I LCKEG +A + + E G IP+ +T++ +I + E E +A +L M+
Sbjct: 383 YNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMI 442
Query: 422 EKGV 425
KG+
Sbjct: 443 AKGL 446
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S++ L +++ D +L ++K+ I+ + + +I GR + A K F
Sbjct: 312 TYNSVLDGLCKSQNLDKATALFMKMKK-WGIQPNKYTYTALIDGLCKGGRLKNAQKLFQH 370
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ VR+ N +++ L + +D L K+ +PN T +I+I++L +KD
Sbjct: 371 LLVKGCCIDVRTYNVMISGLCKEGMFDKA-LAMKSKMEDNGCIPNAVTFDIIIRSLFEKD 429
Query: 200 DVEGAIRVLDEMPSMGMV 217
+ + A ++L M + G++
Sbjct: 430 ENDKAEKLLHGMIAKGLL 447
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 176/332 (53%), Gaps = 6/332 (1%)
Query: 147 RSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
R S NT+L AL Q D + + H+ + P + L++ALC + A+
Sbjct: 76 RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETR--PTAVSYTTLMRALCAERRTGQAV 133
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+L +M + G+ P++VT+ T++ G D++ A + ++ + G P+ Y+ L+ GY
Sbjct: 134 GLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGY 193
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K GR KV +EM G+EP+ V Y +I++ C+ K +A ++D M++R P+
Sbjct: 194 CKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+I+ +C+EG V++A L +L K D +T+I L ++ EA L +E
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313
Query: 386 FERGSI---PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
G P+++T+N++I G+C++ + +A ++ D M E G N+ T+N+LI G ++
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRV 373
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
K+ + +++EM G P+ ++S+LI G
Sbjct: 374 HKVKKAMELMDEMASSGLEPDSFTYSILINGF 405
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 193/433 (44%), Gaps = 75/433 (17%)
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
LR+ + + S TL+ AL +R + ++ + V P+V T LI+ LC
Sbjct: 101 LLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQAS-GVRPDVVTYGTLIRGLC 159
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
DV+ A+ +L EM G+ PN+V ++ +L GY G E +VF ++ RG PD
Sbjct: 160 DAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVV 219
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC--------------- 301
YT L+D + G++ A +VMD+M + G+EPN VTY V+I + C
Sbjct: 220 MYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 302 --KGKK-------------SG-----EARNLLDDMLQRKYV--PSSALCCKVIDLLCEEG 339
KG SG EA LL++M+ + + P+ VI LC+ G
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG 339
Query: 340 -----------------------------------KVEDACELWKRLLRKNCMPDNAISS 364
KV+ A EL + PD+ S
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYS 399
Query: 365 TIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I+ CK ++ A+ L + R I P L+ Y L+A +CE + +A +D+M K
Sbjct: 400 ILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HK 458
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ +V Y+ +I G C++ + K L+ MLD+G P+ ++S+LI SG+ G
Sbjct: 459 NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAA 518
Query: 484 GKVVSMATASGSV 496
+V+ TASG V
Sbjct: 519 ERVLKQMTASGFV 531
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 166/325 (51%), Gaps = 4/325 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
V + + N ++ ALC++ A L + + P V++TT++ A
Sbjct: 75 VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ D+ G PD TY L+ G + AV+++ EM ++G+EPN V Y +++ +C
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + + ++M R P + +ID LC EGKV+ A ++ +++ + P+
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+ +I+ +CKEG + EA L + E+G +TYNTLI G+ E+ EA L ++M
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314
Query: 421 V--EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ E VEPNV T+N +I G CK G ++ ++ + M + GC N +F+LLI GL
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH 374
Query: 479 NEGEVGKVVSMATASGSVESDSWNF 503
+ +++ +SG +E DS+ +
Sbjct: 375 KVKKAMELMDEMASSG-LEPDSFTY 398
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 200/416 (48%), Gaps = 6/416 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++I L A D LL E+ ++ I+ ++ +++ Y AGR E K F
Sbjct: 150 TYGTLIRGLCDAADVDKAVELLREMCESG-IEPNVVVYSCLLQGYCKAGRWECVSKVFEE 208
Query: 140 IEKFNVQRSVRSLNTLLNALV-QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ ++ V L+++L + K +M K + PNV T N+LI ++CK+
Sbjct: 209 MSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE--PNVVTYNVLINSMCKE 266
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV--PDAT 256
V+ A+ + + M G+ + VT+ T++ G +++ A + +++ + P+
Sbjct: 267 GSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVV 326
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+ ++ G K GR+ A +V D M +NG N VT+ ++I + K +A L+D+M
Sbjct: 327 TFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEM 386
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
P S +I+ C+ +V+ A L ++ R P+ ++ LC++G +
Sbjct: 387 ASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMM 446
Query: 377 WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A+ FDE + ++ Y+T+I G C + A M+++G+ P+ TY+MLI
Sbjct: 447 EQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLI 506
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATA 492
F G+ R+L++M G P+ F LI+G G+ +V +++ TA
Sbjct: 507 NMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTA 562
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 11/337 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY+++I L+ D LL E+ E N+ F +VI GR A +
Sbjct: 290 TYNTLITGLSGVLEMDEAMGLLEEMIHG-ETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + ++ + N L+ L++ +K + LM + + + P+ FT +ILI C
Sbjct: 349 DMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLE--PDSFTYSILINGFC 406
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V+ A +L +M G+ P LV + +L +G +E A+ F D + + D
Sbjct: 407 KMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF-DEMHKNCKLDVV 465
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y+ ++ G +L A + + M D G+ P+ VTY ++I F G A +L M
Sbjct: 466 AYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQM 525
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC--KEG 374
+VP A+ +I +G E EL + + K+ D+ I STI L EG
Sbjct: 526 TASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEG 585
Query: 375 K-IWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAE 409
K + ++ FD E +G++ S ++ +C E
Sbjct: 586 KALLQSVPGFDTEVSKGAVISSHELTNMLHKLCNKVE 622
>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
Length = 1056
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 42/412 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V +I Q++ AL+ F +A F P F H+ TY ++ +KL R FD V LL E+ +
Sbjct: 34 IVRLILDQKSASGALETFRWASTF-PGFIHSRSTYRALFYKLCVFRRFDTVYQLLDEMPE 92
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD 166
+ + + +F+T+IR +G A + + + KF ++ S++ N++L+ LV+ D
Sbjct: 93 STGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-ID 151
Query: 167 LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
+ F+ + + +T IL+K LC + + ++L M + G+ PN V + T+
Sbjct: 152 IAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYNTL 211
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
L G + A+ + ++ + P+ T+ +L+ Y +L ++ ++++ G+
Sbjct: 212 LHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGL 267
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
P+ VT ++E C EG+V +A E
Sbjct: 268 VPDVVTVTKVMEVLCN-----------------------------------EGRVSEALE 292
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMC 405
+ +R+ K D +T++ C GK+ A++ F E ER G +P++ TYN LIAG C
Sbjct: 293 VLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFC 352
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+ L A ++DM + N T+N LI+G G +GI+ILE M D
Sbjct: 353 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSVRGRTDDGIKILELMQD 404
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 167/329 (50%), Gaps = 6/329 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+VP+V T +++ LC + V A+ VL+ + S G ++V T++ GY G + A+
Sbjct: 267 LVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQ 326
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R F ++ +G++P+ TY +L+ G+ +G L A+ ++M+ + + N T+ +I
Sbjct: 327 RFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 386
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSAL--CCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
++ + +L+ M + V + + VI +E + EDA E ++ + P
Sbjct: 387 SVRGRTDDGIKILELMQDSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKM--EKLFP 444
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
S + LC++G + + K +D+ G +PS++ + LI + + E L
Sbjct: 445 RAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELI 504
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+DMV +G P T+N +I GFCK GI+ +E+M ++GC P++ S++ L+E L
Sbjct: 505 NDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCVK 564
Query: 478 GNEGEVGKVVSMATASGSV-ESDSWNFLL 505
G+ + ++S+ V +S W+ L+
Sbjct: 565 GDIQKAWLLLSLMVEKSIVPDSSMWSSLM 593
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 117/254 (46%), Gaps = 8/254 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +TY+ +I D+ ++K + I+ F T+IR + GR + +K
Sbjct: 340 NVETYNLLIAGFCDVGMLDSALDTFNDMKTDA-IRWNFATFNTLIRGLSVRGRTDDGIKI 398
Query: 137 FLRIEKFNVQRSVR--SLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIK 193
++ R N+++ + R+ D + + K K+ P + +
Sbjct: 399 LELMQDSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKME----KLFPRAVDRSFKLI 454
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+LC+K ++ D+M G VP+++ ++ Y G +E + D++ RG++P
Sbjct: 455 SLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVTRGYLP 514
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
++T+ ++ G+ K ++ + +K +++M + G P+ +Y ++E C +A LL
Sbjct: 515 RSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCVKGDIQKAWLLL 574
Query: 314 DDMLQRKYVPSSAL 327
M+++ VP S++
Sbjct: 575 SLMVEKSIVPDSSM 588
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 124/273 (45%), Gaps = 11/273 (4%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKN- 174
+I + G + A+ TF ++ ++ + + NTL+ L R D ++ LM +
Sbjct: 347 LIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSVRGRTDDGIKILELMQDSE 406
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ H ++ P N +I K++ E A+ L +M + P V + L +G
Sbjct: 407 TVHGARIDPY----NSVIYGFYKENRWEDALEFLLKMEKL--FPRAVDRSFKLISLCEKG 460
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+++ K + + G VP L+ Y + G + + ++++++M G P T+
Sbjct: 461 GMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVTRGYLPRSSTFN 520
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+I FCK K ++DM +R VP +++ LC +G ++ A L ++ K
Sbjct: 521 AVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCVKGDIQKAWLLLSLMVEK 580
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ +PD+++ S+++ L ++ I L D E
Sbjct: 581 SIVPDSSMWSSLMFCLSQKTAIHLNTSLQDIIE 613
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 13/356 (3%)
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ + NT++N + D M + P+ FT N LI+ALC +
Sbjct: 119 VEALGPSATIITYNTMVNGYCRAGNIDAARRMIDS----VPFAPDTFTYNPLIRALCVRG 174
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V A+ V D+M G P++VT++ +L + A + ++ +G PD TY
Sbjct: 175 CVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYN 234
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
VL++ G + +A+KV++ + G +P+ VTY ++++ C ++ EA LL M
Sbjct: 235 VLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSN 294
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P VI LC++G V A ++ ++ C PD S+I+ LCKE ++ EA
Sbjct: 295 DCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEA 354
Query: 380 KKLFDEF-----ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
KL E + IP +T+NT+I +C+ A ++ D+M E G P++ TYN
Sbjct: 355 IKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNC 414
Query: 435 LIQGF-CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
++ GF CK +E + +L M+ G P+ T++ L GL E E+ + + M
Sbjct: 415 IVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL---SREDEMERAIGM 467
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 221/494 (44%), Gaps = 59/494 (11%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHY---AGKFHPNFSHNYDTYHSIIH 86
T TPP P R + + ++ LD AL++ H +GK N +I
Sbjct: 50 TRTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNI-----LIK 104
Query: 87 KL-ARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
KL A R DA E ++ L + I + T++ Y AG + A + I+
Sbjct: 105 KLCADGRVADA-ERVVEALGPSATII----TYNTMVNGYCRAGNIDAARRM---IDSVPF 156
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
+ N L+ AL +F + H+ P+V T +IL+ A CK+ + A+
Sbjct: 157 APDTFTYNPLIRALCVRGCVLDALAVFDDMLHR-GCSPSVVTYSILLDATCKESGYKQAV 215
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+LDEM S G P++VT+ ++ +GD+ A +V + G PDA TYT ++
Sbjct: 216 VLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSL 275
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
R +A K++ +M N P+EVT+ +I + C+ G A +L M + P
Sbjct: 276 CSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDI 335
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLL----RKNCMPDNAISSTIIHWLCKEGKIWEAKK 381
++D LC+E +V++A +L K LL KNC+PD +TII LC++G A K
Sbjct: 336 ITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIK 395
Query: 382 LFDEF-ERGSIPSLLTYNTLIAG-MCESAELTEAGRLWDDMVEKGVEPNVFTY------- 432
+ DE E G IP + TYN ++ G +C+S + EA L + MV G+ P+ TY
Sbjct: 396 VVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL 455
Query: 433 ----------------------------NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
N ++ G CK I M+ GC P++
Sbjct: 456 SREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDE 515
Query: 465 TSFSLLIEGLYESG 478
+++ +L+EG+ G
Sbjct: 516 STYIILVEGIAYEG 529
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 173/359 (48%), Gaps = 20/359 (5%)
Query: 147 RSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
RS N L LVQ D LVH + + + P V CNILIK LC V
Sbjct: 59 RSGGGANRRLRGLVQRGELDGALRLVHSISGSGKD-----PAVIPCNILIKKLCADGRVA 113
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A RV++ ++G ++T+ T++ GY G+I+ A+R+ + + PD TY L+
Sbjct: 114 DAERVVE---ALGPSATIITYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLI 167
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
G + DA+ V D+M G P+ VTY ++++A CK +A LLD+M +
Sbjct: 168 RALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCE 227
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +I+ +C +G V +A ++ L C PD + ++ LC + EA KL
Sbjct: 228 PDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKL 287
Query: 383 FDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ F P +T+N +I +C+ + A ++ M E G P++ TY+ ++ G CK
Sbjct: 288 LTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCK 347
Query: 442 IGNAKEGIRILEE----MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
E I++L+E M+ K C P++ +F+ +I L + G KVV + G +
Sbjct: 348 ERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCI 406
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 46/414 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++++ RA DA ++ + P+ + +IR + G A+ F
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSVPFAPDT----FTYNPLIRALCVRGCVLDALAVFDD 185
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ SV + + LL+A + Y ++ R K P++ T N+LI A+C +
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSK-GCEPDIVTYNVLINAMCSQG 244
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
DV A++VL+ +PS G P+ VT+T +L E A ++ + PD T+
Sbjct: 245 DVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFN 304
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA----RNLLDD 315
++ + G + A KV+ +M ++G P+ +TY +++ CK ++ EA + LL +
Sbjct: 305 AVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAE 364
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH-WLCKEG 374
M+ + +P +I LC++G + A ++ + C+PD + I+ +LCK
Sbjct: 365 MVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSC 424
Query: 375 KIWEAKKLF-------------------------DEFER-----------GSIPSLLTYN 398
K EA L DE ER G P + YN
Sbjct: 425 KTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYN 484
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++ G+C+ A + MV G P+ TY +L++G G +E +L
Sbjct: 485 AILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 56/316 (17%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARAFDAVESLLTEL 104
L++ + Q ++ AL++ + P++ D TY ++ L + ++ + LLT++
Sbjct: 236 LINAMCSQGDVGEALKVLNSL----PSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKM 291
Query: 105 KQNPEIKCGE-----NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNAL 159
N C N IT + G GR A K ++ + + + +++++ L
Sbjct: 292 FSN---DCAPDEVTFNAVITSLCQKGFVGR---ATKVLAQMSEHGCTPDIITYSSIMDGL 345
Query: 160 VQNKRYDLVHLMFKNSRHKF---KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ +R D + K + +P+ T N +I +LC+K + AI+V+DEM G
Sbjct: 346 CKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGC 405
Query: 217 VPNLVTHTTILGGYVWRG------------------------------------DIENAK 240
+P++ T+ I+ G++ + ++E A
Sbjct: 406 IPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAI 465
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+F + G PD Y ++ G K R A+ M NG P+E TY +++E
Sbjct: 466 GMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGI 525
Query: 301 CKGKKSGEARNLLDDM 316
EA+ LL ++
Sbjct: 526 AYEGFLEEAKELLGNL 541
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 193/408 (47%), Gaps = 9/408 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN---LFITVIRNYGLAGRPELA 133
N TY+ ++ L RA +LL E+ + G LF + RN G +
Sbjct: 269 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN----GDSKAM 324
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + K V + + LLN L ++ + + + + S +VP N LI
Sbjct: 325 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ-SLVNAGLVPTRVIYNTLIN 383
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ ++EGA +M S + P+ +T+ ++ G I NA+ + ++ D G P
Sbjct: 384 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 443
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
T+ L+D Y + G+L V+ EM++NG++PN V+YG ++ AFCK K EA +L
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
DDM + +P++ + +ID E G + A L +++ P + +I LC +
Sbjct: 504 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 563
Query: 374 GKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+I EA+++ + IP ++YNTLI+ C + +A L M + G++ V TY
Sbjct: 564 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 623
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ LI G G E + ++M+ P+ ++++E + GNE
Sbjct: 624 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNE 671
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 154/297 (51%), Gaps = 1/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN F+ N++I + + A+ V DEM ++PN +T+ T++ G++ GD+E R+
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ G P+A TY VL+ G + GR+ + ++DEM + P+ TY ++ + +
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
S +L L+ C +++ LC++GKV A E+ + L+ +P I
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ C+ G++ A F + + I P +TYN LI G+C++ +T A L +M
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ GV P V T+N LI + + G ++ +L EM + G PN S+ ++ ++G
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 494
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 165/326 (50%), Gaps = 1/326 (0%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+TC+IL+ LCK V A VL + + G+VP V + T++ GY G++E A FG
Sbjct: 341 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 400
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ R PD TY L++G K R+T+A ++ EM+DNGV P T+ +I+A+ + +
Sbjct: 401 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 460
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ +L +M + P+ +++ C+ GK+ +A + + K+ +P+ + +
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
II + G +A L ++ + I PS++TYN LI G+C ++++EA + + +
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ P+ +YN LI C GN + + + + M G ++ LI GL +G E+
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640
Query: 485 KVVSMATASGSVESDSWNFLLTRIVS 510
+ + V S++ + ++ S
Sbjct: 641 YLYQKMMQNNVVPSNAIHNIMVEAYS 666
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 161/327 (49%), Gaps = 2/327 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+PN T N +I K D+E R+ D+M G+ PN +T+ +L G G +
Sbjct: 231 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 290
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ + VPD TY++L DG + G + + + NGV + T +++
Sbjct: 291 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 350
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK K A +L ++ VP+ + +I+ C+ G++E A + ++ ++ PD+
Sbjct: 351 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 410
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I+ LCK +I A+ L E + G P++ T+NTLI + +L + + +
Sbjct: 411 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 470
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M E G++PNV +Y ++ FCK G E + IL++M K PN ++ +I+ E G
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530
Query: 480 EGEVGKVVSMATASG-SVESDSWNFLL 505
+ +V ++G S ++N L+
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLI 557
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 146/351 (41%), Gaps = 74/351 (21%)
Query: 202 EGAIRVLDEMP--SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD----- 254
+GA+R+L ++ + +P+L + +L + G + +R FG + G PD
Sbjct: 109 DGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWN 168
Query: 255 -------------------------------ATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
A +Y V++ G + GR DAV+V DEM +
Sbjct: 169 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE 228
Query: 284 -----------------------------------NGVEPNEVTYGVMIEAFCKGKKSGE 308
+G++PN +TY V++ C+ + GE
Sbjct: 229 RAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGE 288
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
LLD+M +K VP + D L G + L+ + L+ + S +++
Sbjct: 289 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLN 348
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LCK+GK+ A+++ G +P+ + YNTLI G C++ EL A + M + ++P
Sbjct: 349 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 408
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ TYN LI G CK +L EM D G P +F+ LI+ +G
Sbjct: 409 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEF-E 387
K + G + +A + +R+ R P NA S + +I + + G+ +A ++FDE E
Sbjct: 169 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE 228
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
R +P+ +TYNT+I G + +L RL D MV G++PN TYN+L+ G C+ G E
Sbjct: 229 RAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGE 288
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+L+EM + P+ ++S+L +GL +G+
Sbjct: 289 TSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 10/319 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P R+ L++ + L+ A F H H TY+++I+ L +A +
Sbjct: 373 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH--ITYNALINGLCKAERITNAQ 430
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL E++ N P ++ F T+I YG G+ E +++ ++ +V S ++
Sbjct: 431 DLLMEMQDNGVNPTVET----FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 486
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+NA +N + + + HK V+PN N +I A + + A ++++M S G
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++VT+ ++ G + I A+ + + + +PDA +Y L+ G + A+
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ M G++ TY +I + E L M+Q VPS+A+ +++
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665
Query: 336 CEEGKVEDACELWKRLLRK 354
+ G A +L K +L+K
Sbjct: 666 SKYGNEIKAEDLRKEMLQK 684
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 309 ARNLLDDMLQ--RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A LL D+ R +PS + C +++ L G+ D + L PD +
Sbjct: 111 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 170
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIP--SLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
+ G + EA + R P + +YN +IAGM + +A ++D+M E+
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
V PN TYN +I G K G+ + G R+ ++M+ G PN ++++L+ GL +G GE
Sbjct: 231 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 290
Query: 485 KVVS-MATASGSVESDSWNFLLTRIVSDLDSGA 516
++ MA+ + +++ L + + DS A
Sbjct: 291 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323
>gi|356514549|ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Glycine max]
Length = 465
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 203/426 (47%), Gaps = 19/426 (4%)
Query: 29 ITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIF----HYAGKFHPNFSHNYDTYHSI 84
++ + PI P+ RL S++ ++ LALQ+F H+ +Y +
Sbjct: 1 MSTSKPISPF-------RLTSLLRSTKDPSLALQLFLNPNPNPNPNPRPLRHSLRSYDLL 53
Query: 85 IHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN 144
I KLARA+ F +E +L +L+ + E L VI +Y A P A++TFL I F
Sbjct: 54 ITKLARAKMFPQMEQILHQLQTLTQFPVPEPLLCRVIISYARARLPSRALRTFLSIPSFR 113
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC-KKDDVEG 203
+++S N+LL+AL+ + + + + RH P+ T NILI+A +D+
Sbjct: 114 CTPTLKSFNSLLHALLLCRDFPSLPRLLPRLRHFSASGPDACTYNILIRACSLNNNDLAH 173
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV----PDATTYT 259
A ++ DEM ++G+ P VT T++ + + N + F D V P+ YT
Sbjct: 174 ARKLFDEMLTLGVRPTQVTFGTLI-NMLCKDPHLNLREAFSVKEDMERVFKLKPNVFVYT 232
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ ++G A ++ DEM N + + V Y + A K K G +L++M
Sbjct: 233 NLIKAVCEVGDFDCAFRLKDEMVRNNLRLDVVVYNTLTSAVFKAGKKGLGYRILEEMKSG 292
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P + C +I C EG + +A + + + PD + +I WLCKEGK EA
Sbjct: 293 GVKPDAVTCNVLIGEFCREGNLVEAYRVLDDGV-EGVKPDVFGYNVVIGWLCKEGKWREA 351
Query: 380 KKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF D R +P ++TY T+ G+C+ + EAG + ++MV KG P + N +
Sbjct: 352 DDLFRDMPRRQCVPDVVTYRTVFDGLCQWMQFEEAGLVLEEMVFKGYVPCSSSLNEFVGR 411
Query: 439 FCKIGN 444
C+ G+
Sbjct: 412 LCQEGD 417
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 198/430 (46%), Gaps = 22/430 (5%)
Query: 71 HPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP 130
+ F H +Y ++IH L + F +SL+ + +F +I G
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKG----- 60
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCN 189
N + + + L+ A +++ D V HKF V + TC
Sbjct: 61 -------------NQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFD--TCK 105
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+++ L K +E+ G +L ++ + GDI A+ VF I
Sbjct: 106 KMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKW 165
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P +Y LM+GYI+LG L + K+ M +GV+P+ TY V+I CK K +A
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L ++ML + VP+ +ID C+ G+V+ A E++K++L ++ +PD +T+I+
Sbjct: 226 NELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYG 285
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK+G + +A L DE +G P +TY TLI G C+ +L A M+++ + +
Sbjct: 286 LCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 345
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
Y LI G C+ G + + +++ EML G P+ +++++I + G+ + K++
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 405
Query: 489 MATASGSVES 498
G S
Sbjct: 406 EMQRDGHAPS 415
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I+ L + D L E+ + G F T+I + GR +LA++ + +
Sbjct: 208 TYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVT-FTTLIDGHCKNGRVDLAMEVYKQ 266
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVH-LMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ ++ + + NTL+ L + + H LM + S K P+ T LI CK+
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLK--PDKITYTTLIDGCCKE 324
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
D++ A M + + V +T ++ G G +A+++ ++L G PD TY
Sbjct: 325 GDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTY 384
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
T++++ + K G + K++ EM+ +G P+ VT
Sbjct: 385 TMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 195/441 (44%), Gaps = 22/441 (4%)
Query: 42 LYPKRLVSMIFR-QQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
L P R+ ++ + +++ L+ + F++ +PN +TY I+H L + F + ES+
Sbjct: 155 LTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPN-CQTLETYSIILHILTKNHKFKSAESV 213
Query: 101 LTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALV 160
L + + I LF ++ +Y + + F ++ L ++
Sbjct: 214 LKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSL-----FKTYAQMKKLRNAIDVFC 268
Query: 161 QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNL 220
Q K Y + P V +CN I A + A+ EM + PN+
Sbjct: 269 QMKDYGFL--------------PRVESCNAYISASISLQRGDIALTFYREMQRYRISPNV 314
Query: 221 VTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE 280
T ++ + G +E A VF + G+ P T+Y L+ GY G L +K+
Sbjct: 315 YTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKIL 374
Query: 281 MEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
ME NGV P++VT+ +I FC+G K EA + +M VP++ +I+ + G
Sbjct: 375 MEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGN 434
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNT 399
E L +LR D + +I LC EG+ +A L E +R + +P+ T++
Sbjct: 435 SEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSA 494
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G C A +L+ M+ G PN T+ MLI FCK + + ++ EM ++
Sbjct: 495 LITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERS 554
Query: 460 CFPNKTSFSLLIEGLYESGNE 480
P+ + S L GL+ SG E
Sbjct: 555 IAPDSDTLSELCRGLWLSGKE 575
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDAT--TYTVLMDGYIKLGRLTDAVKVMDEME 282
++L G + G I++ ++F IL + D++ + L Y ++ +L +A+ V +M+
Sbjct: 212 SVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMK 271
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
D G P + I A ++ A +M + + P+ V+ C+ GK+E
Sbjct: 272 DYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLE 331
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLI 401
A E++KR+ P +T+I C +G + KL E+ + P +T+NTLI
Sbjct: 332 KAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLI 391
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G C +L EA +++ +M V PN TYN LI G+ ++GN++ G R+ +EML G
Sbjct: 392 NGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIK 451
Query: 462 PNKTSFSLLIEGLYESGNEGEVGKVV 487
+ +++ LI GL G + +V
Sbjct: 452 ADILTYNALILGLCMEGRTKKAAYLV 477
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLL----NALVQNKRYDLVHLMFKNSRHKFKVVP 183
G+ E A++ F R+E ++ S NTL+ N + N L LM KN V P
Sbjct: 328 GKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG-----VRP 382
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ T N LI C+ + A ++ EM + +VPN +T+ T++ GY G+ E R+
Sbjct: 383 DDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLH 442
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++L G D TY L+ G GR A ++ E++ + PN T+ +I C
Sbjct: 443 DEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVR 502
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
K S A L M++ P+ +I C+ + A E+ + + ++ PD+
Sbjct: 503 KNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTL 562
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE 387
S + L GK A KL E E
Sbjct: 563 SELCRGLWLSGKEELALKLCKEME 586
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y G +K + +EK V+ + NTL+N + + + +F +
Sbjct: 352 YNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMK 411
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
VVPN T N LI + + E R+ DEM G+ +++T+ ++ G G
Sbjct: 412 AN-DVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRT 470
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A + ++ VP+++T++ L+ G A ++ M +G PN T+ ++
Sbjct: 471 KKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKML 530
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I FCK + A ++ +M +R P S ++ L GK E A +L K + K+
Sbjct: 531 ISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHL 590
Query: 357 MPDNAISSTIIHW 369
MP+ S I++
Sbjct: 591 MPEGFDKSKTINF 603
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 119/275 (43%), Gaps = 10/275 (3%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
FS +Y+++I ++ L +++N ++ + F T+I + G+ A
Sbjct: 345 FSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG-VRPDDVTFNTLINGFCRGGKLHEA 403
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDL---VH-LMFKNSRHKFKVVPNVFTCN 189
K F ++ +V + + NTL+N Q ++ +H M +N + ++ T N
Sbjct: 404 NKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNG-----IKADILTYN 458
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI LC + + A ++ E+ +VPN T + ++ G R + E A +++ ++
Sbjct: 459 ALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRS 518
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G P+ T+ +L+ + K AV+V+ EM + + P+ T + K A
Sbjct: 519 GCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELA 578
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
L +M + +P K I+ E + E+
Sbjct: 579 LKLCKEMEMKHLMPEGFDKSKTINFRAESEEKENG 613
>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
Length = 821
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 168/298 (56%), Gaps = 3/298 (1%)
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
N+ + A CK ++ A+++L+EM + G+VP+ + +T ++ GY +G+ ENA +VF +L
Sbjct: 408 NVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLK 467
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
PD TY +L GY + G + +++ M D G+EPN +TYG+ I FC+G E
Sbjct: 468 ANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSE 527
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A L + + ++ L ++ G + A L+ R+ ++ M D+ S +I+
Sbjct: 528 AEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLIN 587
Query: 369 WLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC++ K+ EA + E+ +P +++Y+ LI+ C+S ++ A + DMVE+G+
Sbjct: 588 GLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGL-S 646
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG-LYESGNEGEVG 484
+V Y +L+ G+CK+G +E + +M++ G P+ ++++L++G L E+ +G G
Sbjct: 647 DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQG 704
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 27/375 (7%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMF 172
+ +I Y L G E A + F ++ K N++ V + N L + +N K +DL+ M
Sbjct: 442 YTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMM 501
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ PN T I I C+ ++ A + + + G+ V +++++ GY+
Sbjct: 502 DQG-----LEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLH 556
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G ++A +F + +G + D + + L++G + ++ +A V M + V P+ ++
Sbjct: 557 SGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVIS 616
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I A+C+ + A DM++R +A +++ C+ G++++ACEL+ +++
Sbjct: 617 YSKLISAYCQSRDMRNAHLWFHDMVERGLSDVTAYTI-LMNGYCKVGQLQEACELFVQMV 675
Query: 353 RKNCMPDNAISSTIIHWLCKEG--KIWEA--------------KKLFDEFERGSI-PSLL 395
PD + ++ KE + W+ K L + I P +
Sbjct: 676 NLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVT 735
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
Y LI G C++ L EA L+D+M+ KG+ P+V Y LI G+C G + + +EM
Sbjct: 736 CYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEM 795
Query: 456 LDKGCFPNKTSFSLL 470
+DKG P+ SFS+L
Sbjct: 796 IDKGMKPDVLSFSVL 810
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 161/306 (52%), Gaps = 36/306 (11%)
Query: 143 FNV--QRSVRSLNTLLNALV----QNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
FN+ ++ + +++ L +++V + D +++F + +V ++ +C+ LI LC
Sbjct: 532 FNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHL-SCSKLINGLC 590
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ + V+ A V M +VP++++++ ++ Y D+ NA F D+++RG + D T
Sbjct: 591 RDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERG-LSDVT 649
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS----GEARNL 312
YT+LM+GY K+G+L +A ++ +M + G++P+ V Y V+++ K G A+
Sbjct: 650 AYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKER 709
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L+ K+ KV+ +E ++E PD + +I+ CK
Sbjct: 710 RTFFLRTKH--------KVLLSSMKEMEIE---------------PDVTCYTVLIYGQCK 746
Query: 373 EGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ EA+ LFDE +G P + Y TLI G C E+ +A L+ +M++KG++P+V +
Sbjct: 747 AEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLS 806
Query: 432 YNMLIQ 437
+++L Q
Sbjct: 807 FSVLHQ 812
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 174/376 (46%), Gaps = 6/376 (1%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR--- 176
V R+ A + + A + ++ + + V+ V+ ++ + L +YDL + M +
Sbjct: 229 VTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQ 288
Query: 177 --HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
+ +V F N++I LCK+ +E A +VL+ G P+L ++ ++ + G
Sbjct: 289 EISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMG 348
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
++E A D++ G + L+ KLG +++ + + D G+ + V Y
Sbjct: 349 NLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYN 408
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
V ++A+CK EA LL++M+ VP +I+ C +G+ E+A ++++++L+
Sbjct: 409 VAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKA 468
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
N PD + + + G + + L + ++G P+ LTY IAG C L+EA
Sbjct: 469 NIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEA 528
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L++ + EKG++ Y+ ++ G+ G + + +G + S S LI G
Sbjct: 529 EVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLING 588
Query: 474 LYESGNEGEVGKVVSM 489
L E V SM
Sbjct: 589 LCRDEKVQEASTVCSM 604
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 212/487 (43%), Gaps = 28/487 (5%)
Query: 34 PIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
PI+ W + L +V + R A+ ++ F H++ TY II L+ +
Sbjct: 55 PIQKWHRFLTSDNVVHTL-RYLRRKPAVAFAYFKDTHSLGFHHDFSTYSEIIQILSHSFQ 113
Query: 94 FDAVESLLTEL-----KQNPEI---------KCGENLFIT-----VIRNYGLAGRPELAV 134
+ SL E+ PEI C + ++ +I+ Y + V
Sbjct: 114 GKMLVSLFCEILSGTDSGGPEILALIDHLRKTCATSHVLSYAVNCLIKAYTTCHDAQETV 173
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
F + + ++ + N LL + Q+ +V + + F++ + + NI+ ++
Sbjct: 174 DMFCHLCRLGFVPTLWACNFLLKFVSQSSDSHMVVAAYDRMK-CFQLTLDAQSLNIVTRS 232
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE---NAKRVFGDI--LDR 249
L + + + A RV M MG+ ++ +++ + G G + N R + + + +
Sbjct: 233 LFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQEISQ 292
Query: 250 GWVP-DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
VP +A Y +++DG K +L +A KV++ +G P+ Y +I + CK +
Sbjct: 293 ERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEK 352
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A ++DM+ + + ++ L + G + + +++ D + + +
Sbjct: 353 AWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMD 412
Query: 369 WLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK G + EA KL +E G +P + Y LI G C E A ++++ M++ ++P
Sbjct: 413 AYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKP 472
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
+V TYN+L G+ + G + +LE M+D+G PN ++ + I G GN E +
Sbjct: 473 DVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLF 532
Query: 488 SMATASG 494
++ G
Sbjct: 533 NIVEEKG 539
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 54/302 (17%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
L+ +++ Y +G + A FLR+ K Q D HL
Sbjct: 546 LYSSMVCGYLHSGWTDHAYMLFLRVAK------------------QGNMVD--HL----- 580
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+C+ LI LC+ + V+ A V M +VP++++++ ++ Y D
Sbjct: 581 -----------SCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRD 629
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ NA F D+++RG + D T YT+LM+GY K+G+L +A ++ +M + G++P+ V Y V
Sbjct: 630 MRNAHLWFHDMVERG-LSDVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTV 688
Query: 296 MI------------EAFCKGKKSGEARN----LLDDMLQRKYVPSSALCCKVIDLLCEEG 339
++ + K +++ R LL M + + P +I C+
Sbjct: 689 LLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAE 748
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYN 398
+E+A L+ +L K PD +T+I+ C +G+I +A+ LF E ++G P +L+++
Sbjct: 749 YLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFS 808
Query: 399 TL 400
L
Sbjct: 809 VL 810
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 53/213 (24%)
Query: 144 NVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEG 203
NV V S + L++A Q++ HL F + + + +V IL+ CK ++
Sbjct: 609 NVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVER--GLSDVTAYTILMNGYCKVGQLQE 666
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYV-------WRG---------------------- 234
A + +M ++G+ P++V +T +L G++ W+G
Sbjct: 667 ACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMK 726
Query: 235 ----------------------DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+E A+ +F ++L +G PD YT L++GY G +
Sbjct: 727 EMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIA 786
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
A + EM D G++P+ +++ V+ + + +K
Sbjct: 787 KAEDLFQEMIDKGMKPDVLSFSVLHQRTLRHRK 819
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 215/436 (49%), Gaps = 12/436 (2%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
R + ++ DLA + G FS + TY I L + + F ++ LL +++
Sbjct: 49 RFIGVLINHSRFDLANHYYSQMGT--RGFSLSSFTYSRFITGLCKVKNFTFIDELLHDME 106
Query: 106 QN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
P+I N+++ ++ + GR +LA++ F +I K + V + +++ + +
Sbjct: 107 TLNCLPDI-WAFNIYLHLLF---VEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKI 162
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR-VLDEMPSMGMVPNLV 221
K++D +++ HK P+ C ++ LC V+ A ++D M S + + +
Sbjct: 163 KKFDTAIQFWRDMIHK-GFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTL 221
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+ ++ G+ G I+ A+ + + G PD TY V ++ + L DA K++ M
Sbjct: 222 VYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLM 281
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
E +G+EP+ +Y +++ CKG +A L+ + + K + +I C+ G
Sbjct: 282 ERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDT 341
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
A +L++ + +K PD + I +G AKKL D+ E G P + Y T+
Sbjct: 342 TSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTI 401
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I +C+S ++ A ++ DMVE+G+ P+V ++N LI GFCK E + + EEM ++G
Sbjct: 402 IDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGS 461
Query: 461 FPNKTSFSLLIEGLYE 476
+P++ ++ L+I GL E
Sbjct: 462 YPDEVTYKLIIGGLIE 477
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 176/382 (46%), Gaps = 15/382 (3%)
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV-HLMFKNSRHKF 179
I Y AG + AV+ F + + N + N + L+ + R+DL H + F
Sbjct: 16 IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+ + FT + I LCK + +L +M ++ +P++ L G I+ A
Sbjct: 76 SL--SSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLA 133
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
VF I+ G PD TYT+++ G K+ + A++ +M G P+ G ++
Sbjct: 134 LEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVG 193
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCK-VIDLLCEEGKVEDACELWKRLLRKNCMP 358
C G+K A L+ D+++ V S L +I C G+++ A + + R C P
Sbjct: 194 LCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEP 253
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMC-----ESAELTE 412
D + +++ C E + +AKKL ER I P + +YN L+ G+C + A L
Sbjct: 254 DLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLM 313
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
++W KG+ +V +YN +I+ FCKIG+ ++ EEM KG P+ +F++ I+
Sbjct: 314 TNKMW----PKGL-CDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIK 368
Query: 473 GLYESGNEGEVGKVVSMATASG 494
G+ K++ T G
Sbjct: 369 AFLGKGSFNIAKKLLDQMTEMG 390
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 156/348 (44%), Gaps = 38/348 (10%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
+ D A+Q + H FS + +I+ L R D L+ ++ ++ +K
Sbjct: 163 KKFDTAIQF--WRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLST 220
Query: 115 NLFITVIRNYGLAGRPE--LAVKTFLR--------------------------------- 139
++ +I + AGR + A+K+F+R
Sbjct: 221 LVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKL 280
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ ++ V S N LL + + D +L+ N K + +V + N +IKA CK
Sbjct: 281 MERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWP-KGLCDVVSYNTIIKAFCKIG 339
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
D A ++ +EM G+ P++VT T + ++ +G AK++ + + G PD YT
Sbjct: 340 DTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYT 399
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++D K G++ A + +M + G+ P+ +++ +I FCK + EA +L ++M R
Sbjct: 400 TIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNR 459
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
P +I L EE K+ AC +W +++ K D AI+ T+I
Sbjct: 460 GSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 43/267 (16%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y + GY+K G + AV+V DEM + + Y I + A + M
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R + SS + I LC+ EL + NC+PD + +H L EG+I
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 378 EAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A ++F++ +V+ G +P+V TY ++I
Sbjct: 132 LALEVFEK----------------------------------IVKNGRKPDVVTYTIIIH 157
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVE 497
G CKI I+ +M+ KG P+ + ++ GL + +++ SG V+
Sbjct: 158 GVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVK 217
Query: 498 SDSWNFLLTRIVSDLDSG---AGALDE 521
L T + + L SG AG +D+
Sbjct: 218 ------LSTLVYNALISGFCRAGRIDK 238
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 167/330 (50%), Gaps = 2/330 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ E V S N L+ LV D+ +F + + P+ FT N+++ A+ K
Sbjct: 766 KFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMK-RLGCDPDEFTYNLILDAMGKS 824
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E ++V EM G VT+ TI+ G V + A ++ ++ G+ P TY
Sbjct: 825 MRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTY 884
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+DG +K G++ DA + DEM D G +PN Y +++ + + + L +M+
Sbjct: 885 GPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVD 944
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +I LC G++ D+ +++L PD + +IH L + G++ E
Sbjct: 945 QGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEE 1004
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A LF++ E+ I P+L TYN+LI + + + EAG++++++++ G +PNVFTYN LI
Sbjct: 1005 AVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIG 1064
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
G+ G+ +M+ GC PN +++
Sbjct: 1065 GYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 199/438 (45%), Gaps = 42/438 (9%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPELAVKTF 137
+Y++ +H L + + ++K+ P+ + + ++N GL +K +
Sbjct: 638 SYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKN-GLMNEALHTLKEY 696
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ RS S ++L+ +++ + + F + +++ + F + LI+ LCK
Sbjct: 697 ILQPGSKADRS--SFHSLMEGILKRAGME-KSIEFAENIALSRILLDDFFLSPLIRHLCK 753
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++ + S+G+ ++ ++ G V I+ A+ +F ++ G PD T
Sbjct: 754 SKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFT 813
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y +++D K R+ D +KV EM G E VTY +I K K EA +L ++
Sbjct: 814 YNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLM 873
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-------------- 363
+ P+ ++D L ++GK+EDA +L+ +L C P+ AI
Sbjct: 874 SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTE 933
Query: 364 ---------------------STIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
+ +I LC G++ ++ F + E G P L+TYN LI
Sbjct: 934 KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLI 993
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G+ S L EA L++DM + G+ PN++TYN LI K G A E ++ EE+L G
Sbjct: 994 HGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWK 1053
Query: 462 PNKTSFSLLIEGLYESGN 479
PN +++ LI G SG+
Sbjct: 1054 PNVFTYNALIGGYSVSGS 1071
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 201/417 (48%), Gaps = 24/417 (5%)
Query: 82 HSIIHKLARARAFDAVESL--LTELKQNPEI-----KCGENLFITVIRNYGLAGRPELAV 134
+++H L R+ A D E+L + Q P I C N + ++R +G R
Sbjct: 79 QNVVHML-RSAAADPAEALQLFKSVAQQPRIVHTTESC--NYMLELMRAHG---RVRDMA 132
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNK--RYDLVHL-MFKNSRHKFKVVPNVFTCNIL 191
+ F +++ V+ +V + T+ +L R V L M K + +V N +T N L
Sbjct: 133 QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEA----GIVLNSYTYNGL 188
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I L K A+ V M + G+VP++ T++ ++ + R D+E + ++ D G
Sbjct: 189 IYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGV 247
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
P+ +YT+ + + GR +A K++ +MED G +P+ VT V+I+ C + +A++
Sbjct: 248 KPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKD 307
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST-IIHWL 370
+ M P ++D + G E+W ++ + DN ++ T ++ L
Sbjct: 308 VFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNA-MKADGYNDNVVAYTAVVDAL 366
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C+ G++ EA +FD+ ++G P +YN+LI+G ++ L A L++ M G PN
Sbjct: 367 CQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNG 426
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+TY + I + K G + + I+ E M KG P+ + + ++ L +SG G +V
Sbjct: 427 YTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRV 483
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 167/360 (46%), Gaps = 5/360 (1%)
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
E V +E V+ +V S + L Q R++ + + + + P+V T +
Sbjct: 233 ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDE-GCKPDVVTNTV 291
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI+ LC V A V +M + P+ VT+ T+L GD + ++ + G
Sbjct: 292 LIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADG 351
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
+ + YT ++D ++GR+ +A V D+M+ G+EP + +Y +I F K + A
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHAL 411
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
L + M P+ I+ + G+ A + ++ + K +PD + +++ L
Sbjct: 412 ELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSL 471
Query: 371 CKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
K G++ AK++F E + G P +TY +I +++ EA +++ +M+E P+V
Sbjct: 472 AKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDV 531
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
N LI K G E +I E+ + P +++ L+ GL G EG+V +V+ +
Sbjct: 532 LAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGL---GREGKVKEVMHL 588
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 207/449 (46%), Gaps = 56/449 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY +I ++A D + +E+ + P++ +L T+ + AGR A K
Sbjct: 498 TYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYK----AGRGNEAWKI 553
Query: 137 FLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F +++ N+ + + NTLL L + K +++HL+ + + + + PN+ T N ++ L
Sbjct: 554 FHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYP--PNLITYNTVLDCL 611
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK +V A+ +L M G +P+L ++ T L G V + A R+F + + PD
Sbjct: 612 CKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQ-MKKVLAPDY 670
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDE---------------------MEDNGVEP------ 288
TT ++ ++K G + +A+ + E ++ G+E
Sbjct: 671 TTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAE 730
Query: 289 ---------NEVTYGVMIEAFCKGKKSGEARNLLDDM----LQRKYVPSSALCCKVIDLL 335
++ +I CK KK+ EA L+ + K +AL C ++D
Sbjct: 731 NIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVD-- 788
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSL 394
E ++ A L+ + R C PD + I+ + K +I + K+ E +G +
Sbjct: 789 --ENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTY 846
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
+TYNT+I+G+ +S L EA L+ ++ +G P TY L+ G K G ++ + +E
Sbjct: 847 VTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDE 906
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
MLD GC PN+ +++L+ G +GN +V
Sbjct: 907 MLDYGCKPNRAIYNILLNGYRLAGNTEKV 935
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 215/465 (46%), Gaps = 20/465 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
++ N Y +++ L + D + ++KQ I+ + + ++I + A R A
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKG-IEPQQYSYNSLISGFLKADRLNHA 410
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLN-------ALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
++ F + + + +N +L KRY+L+ +VP+V
Sbjct: 411 LELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMK--------SKGIVPDVV 462
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
N ++ +L K + A RV E+ S+G+ P+ +T+T ++ + + A +VF ++
Sbjct: 463 AGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEM 522
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
++ VPD L+D K GR +A K+ E+++ ++P + TY ++ + K
Sbjct: 523 IETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKV 582
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
E +LL++M Y P+ V+D LC+ G+V A + + K CMPD + +T
Sbjct: 583 KEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTA 642
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA-GRLWDDMVEKGV 425
+H L KE ++ EA ++F + ++ P T T++ ++ + EA L + +++ G
Sbjct: 643 LHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGS 702
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+ + +++ L++G K ++ I E + + S LI L +S E +
Sbjct: 703 KADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHE 762
Query: 486 VVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+V + G S+++ S+N L+ +V + +D G E+ C
Sbjct: 763 LVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGC 807
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 307 GEARNLLDDMLQR-KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
EA L + Q+ + V ++ C +++L+ G+V D +++ + R+ + T
Sbjct: 93 AEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLT 152
Query: 366 IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
I L EG + A E G + + TYN LI + +S EA ++ M G
Sbjct: 153 IFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDG 212
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ P+V TY++L+ F K + + + +L EM D G PN S+++ I L ++G E
Sbjct: 213 IVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAY 271
Query: 485 KVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALD 520
K++ G N +L +I+ D + A D
Sbjct: 272 KILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKD 307
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 12/237 (5%)
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR+ D +V D M+ V+ N T+ + + A L M + V +S
Sbjct: 126 GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTY 185
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK---EGKIWEAKKLFDE 385
+I L + G +A E++K + +P S ++ K E +W +++ D
Sbjct: 186 NGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREMED- 244
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
G P++ +Y I + ++ EA ++ M ++G +P+V T +LIQ C G
Sbjct: 245 --HGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRV 302
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWN 502
+ + +M P++ ++ L++ + G+ G+ V+ + A +++D +N
Sbjct: 303 SDAKDVFWKMKASDQKPDRVTYITLLD---KCGDNGDSRSVIEIWNA---MKADGYN 353
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 228/493 (46%), Gaps = 49/493 (9%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L P+++ +++ Q + +AL F++AG+ + H+ Y+ ++ L++
Sbjct: 101 LKPRQVCAVLQLQSDERIALDFFYWAGR-QWRYRHDPIVYYMMLQVLSK----------- 148
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
T+L Q G + ++ G+A RPE + + R+ + T++
Sbjct: 149 TKLCQ------GARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMM----- 197
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
K V PN+ CN I L + +E A+R L+ M +G+ PN+V
Sbjct: 198 ---------------QKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVV 242
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ ++ GY +E+A + ++ +G PD +Y +M + R+ + +M++M
Sbjct: 243 TYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKM 302
Query: 282 -EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
+DN + P++VTY ++ K + EA L + +R + +++ C +G+
Sbjct: 303 VKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGR 362
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNT 399
++ A E+ ++ K C PD + +++ LCK GK+ EAKK+ + ++ G P+ ++Y
Sbjct: 363 MDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA 422
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
L+ G+C+ EA + + E PN TY++++ G + G E ++ EML KG
Sbjct: 423 LLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKG 482
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIV------SDLD 513
FP +LLI+ L E K + G ++ NF T ++ ++D
Sbjct: 483 FFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCA-VNAVNF--TTVIHGFCQSDNID 539
Query: 514 SGAGALDELLVKN 526
+ LD++ + N
Sbjct: 540 TALSLLDDMYLNN 552
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 194/397 (48%), Gaps = 39/397 (9%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
S T++ L Q+KR V + + K+ P+ T N L+ L K + A+ L E
Sbjct: 278 SYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRE 337
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
G + V ++ I+ + +G ++ AK + +++ +G PD TYT +++G K+G+
Sbjct: 338 TEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGK 397
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A K++ +M +G +PN V+Y ++ C+ S EAR +++ + + P++
Sbjct: 398 VEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSV 457
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERG 389
V+ L EGK+ +AC++ + +L K P + +I LC E K+ EAKK +E RG
Sbjct: 458 VMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRG 517
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDD------------------------------ 419
+ + + T+I G C+S + A L DD
Sbjct: 518 CAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEAT 577
Query: 420 -----MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
M++KG++P TY +I +CK+G +E I++L +ML + +T+++ +IE L
Sbjct: 578 VYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS--KCRTAYNQVIEKL 635
Query: 475 YESGNEGEVGKVVSMATASGS-VESDSWNFLLTRIVS 510
GN KVV + + S +++++ + L+ +S
Sbjct: 636 CNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLS 672
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 193/465 (41%), Gaps = 47/465 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
+Y++++ L + + V +L+ ++ ++ ++ + + T++ G + A++
Sbjct: 278 SYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRE 337
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
E+ Q + ++N+ R D + K P+V T ++ LCK
Sbjct: 338 TEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITK-GCSPDVVTYTAVVNGLCKVG 396
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
VE A ++L +M G PN V++T +L G G+ A+ + + W P+A TY+
Sbjct: 397 KVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYS 456
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR--------- 310
V+M G + G+L++A V+ EM G P V ++I++ C +K EA+
Sbjct: 457 VVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNR 516
Query: 311 --------------------------NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
+LLDDM P + +ID L ++G++E+A
Sbjct: 517 GCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEA 576
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGM 404
++L+K P +IH CK G++ E KL + S YN +I +
Sbjct: 577 TVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS-KCRTAYNQVIEKL 635
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN- 463
C A ++ ++ + T +ML++ + G ++ M D+ P+
Sbjct: 636 CNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDL 695
Query: 464 ----KTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFL 504
K S L++EG E E ++ G++ DS L
Sbjct: 696 KLCEKLSKKLVLEGKLE-----EADNLMLQFVQRGNISPDSSQHL 735
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 148/350 (42%), Gaps = 12/350 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
K +P ++ LV M+ + + D AL+ + F + Y +I++ D
Sbjct: 307 KLFPDQVTYNTLVHMLSKHGHADEALEFLRETEE--RGFQVDKVGYSAIVNSFCMQGRMD 364
Query: 96 AVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
+ ++ E+ C ++ + V+ G+ E A K ++ K + + S
Sbjct: 365 RAKEIVNEMITK---GCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYT 421
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
LLN L Q+ M S + PN T ++++ L ++ + A V+ EM +
Sbjct: 422 ALLNGLCQHGNSLEAREMMNTSEEDW-WTPNAITYSVVMHGLRREGKLSEACDVVREMLT 480
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
G P V ++ + AK+ + L+RG +A +T ++ G+ + +
Sbjct: 481 KGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDT 540
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A+ ++D+M N P+ VT+ +I+A K + EA ML++ P+ VI
Sbjct: 541 ALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIH 600
Query: 334 LLCEEGKVEDACELWKRLL-RKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
C+ G+VE+ +L ++L R C + +I LC G A K+
Sbjct: 601 QYCKMGRVEELIKLLGKMLSRSKC---RTAYNQVIEKLCNFGNPEAADKV 647
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 210/444 (47%), Gaps = 47/444 (10%)
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL-NTLLNALVQ----NKR 164
I E F T+IR + + AV F ++ + N+ + T+++ L + K
Sbjct: 138 IPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKA 197
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+DL+ LM + P+ NI+I A CK ++GA +L+EM + P+++T+T
Sbjct: 198 FDLLRLMEQGITK-----PDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYT 252
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ G E + +F +++ PD T+ ++DG K G++ DA ++M M +
Sbjct: 253 SLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEK 312
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
GVEPNE+TY V+++ +C + G AR + D M+ + P +I+ E+ K++ A
Sbjct: 313 GVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKA 372
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLT------- 396
+L++ + + P S ++ L + G+ AK FDE + G IP+L T
Sbjct: 373 MQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGG 432
Query: 397 ----------------------------YNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
Y +I G+C++ +L +A ++ + G+ P+
Sbjct: 433 YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPD 492
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV- 487
V TY +I G+C+ G E +L +M D GC P+ ++++++ G + S E+ +
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLK 552
Query: 488 SMATASGSVESDSWNFLLTRIVSD 511
+A S S E+ + L+ I D
Sbjct: 553 EIAGKSFSFEAATVELLMDIIAED 576
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 196/386 (50%), Gaps = 7/386 (1%)
Query: 92 RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
+AFD L L + K ++ VI + G + A +++ N+ + +
Sbjct: 196 KAFD-----LLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIIT 250
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
+L++ L + +++ V +F H + P+V T N +I LCK+ VE A ++ M
Sbjct: 251 YTSLIDGLGKLSQWEKVRTLFLEMIH-LNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYM 309
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
G+ PN +T+ ++ GY RG + A+R+F ++D+G PD +YT L++GY++ ++
Sbjct: 310 IEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKM 369
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
A+++ E+ NG++P+ VT V++ + ++ A+ D+M ++P+ C +
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTL 429
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GS 390
+ + G VE+A + +L R+ + I + +I+ LCK GK+ +A F++ G
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGL 489
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
P ++TY +I+G C+ L EA + M + G P+ TYN++++GF + E
Sbjct: 490 HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKA 549
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYE 476
L+E+ K + LL++ + E
Sbjct: 550 FLKEIAGKSFSFEAATVELLMDIIAE 575
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 168/333 (50%), Gaps = 3/333 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S S + LL ALV K Y V +F+ HK ++ + F + ++ + C + V
Sbjct: 71 SAVSFSKLLKALVHMKHYSSVVSIFREI-HKLRIPVDAFALSTVVNSCCLMHRTDLGFSV 129
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV-PDATTYTVLMDGYI 266
L G+ N VT TT++ G +++A +F ++ PD Y +MDG
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLC 189
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K G A ++ ME +P+ Y ++I+AFCK A +LL++M Q+ P
Sbjct: 190 KKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDII 249
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ID L + + E L+ ++ N PD +++I LCKEGK+ +A+++
Sbjct: 250 TYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYM 309
Query: 387 -ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E+G P+ +TYN ++ G C ++ A R++D M++KG+EP++ +Y LI G+ +
Sbjct: 310 IEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKM 369
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +++ E+ G P+ + S+L+ GL+E G
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVG 402
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 146/305 (47%), Gaps = 3/305 (0%)
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A + +M + +P+ V+ + +L V + +F +I DA +
Sbjct: 53 LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++ + R V+ G+ NEVT+ +I K +A +L +++
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 321 YV-PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P + V+D LC++G + A +L + + + PD I + +I CK+G + A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L +E ++ +IP ++TY +LI G+ + ++ + L+ +M+ + P+V T+N +I G
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
CK G ++ I+ M++KG PN+ +++++++G G G ++ G +E
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG-IEP 351
Query: 499 DSWNF 503
D ++
Sbjct: 352 DIISY 356
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 205/432 (47%), Gaps = 15/432 (3%)
Query: 55 QNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGE 114
++LD A+ F Y + P F D + +I R D SL +++ I
Sbjct: 85 KSLDDAIDFFDYMVRSRP-FYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNI 141
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK- 173
F +I+ + + ++ TF ++ K Q V + NTLL+ L R +F
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 174 --------NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
+ + + P V T N LI LC + V A ++++M G+ ++VT+ T
Sbjct: 202 MVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
I+ G GD ++A + + + PD Y+ ++D K G +DA + EM + G
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ PN TY MI+ FC + +A+ LL DM++R+ P +I +EGK+ +A
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 381
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMC 405
+L +L + PD +++I+ CK + +AK +FD + P ++T+NT+I C
Sbjct: 382 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM---ASPDVVTFNTIIDVYC 438
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ + E +L ++ +G+ N TYN LI GFC++ N + +EM+ G P+
Sbjct: 439 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 498
Query: 466 SFSLLIEGLYES 477
+ ++L+ G E+
Sbjct: 499 TCNILLYGFCEN 510
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 200/404 (49%), Gaps = 11/404 (2%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T++ G + A+ ++E+ +++ V + +++ L ++ + +F K
Sbjct: 261 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 320
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PNVFT N +I C A R+L +M + P+++T ++ V G +
Sbjct: 321 -GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 379
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A+++ ++L R PD TY ++ G+ K R DA + D M P+ VT+ +I+
Sbjct: 380 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIID 435
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C+ K+ E LL ++ +R V ++ +I CE + A +L++ ++ P
Sbjct: 436 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 495
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLW 417
D + +++ C+ K+ EA +LF+ + I + YN +I GMC+ +++ EA L+
Sbjct: 496 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 555
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ GVEP+V TYN++I GFC + + +M D G P+ ++++ LI G ++
Sbjct: 556 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 615
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDE 521
G + +++S ++G S + ++V+DL + G LD+
Sbjct: 616 GEIDKSIELISEMRSNGF----SGDAFTIKMVADLITD-GRLDK 654
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 165/382 (43%), Gaps = 46/382 (12%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFL 138
Y +II +L + + L +E+ E N+F +I + GR A +
Sbjct: 294 YSAIIDRLCKDGHHSDAQYLFSEM---LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 350
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + + V + N L++A V+ + + H+ + P+ T N +I CK
Sbjct: 351 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMIYGFCKH 409
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ + A + D M S P++VT TI+ Y ++ ++ +I RG V + TTY
Sbjct: 410 NRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+ G+ ++ L A + EM +GV P+ +T +++ FC
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC----------------- 508
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
E K+E+A EL++ + D + IIH +CK K+ E
Sbjct: 509 ------------------ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 550
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A LF G P + TYN +I+G C + +++A L+ M + G EP+ TYN LI+
Sbjct: 551 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 610
Query: 438 GFCKIGNAKEGIRILEEMLDKG 459
G K G + I ++ EM G
Sbjct: 611 GCLKAGEIDKSIELISEMRSNG 632
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 26/300 (8%)
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
CN +I + + + AI + +M + N+ + ++ + + + FG +
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G+ PD T+ L+ G R+++A+ + +G M+E
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALAL---------------FGYMVET-------- 205
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+L D M++ P +I+ LC EG+V +A L +++ K D TI+
Sbjct: 206 --GSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ +CK G A L + E I P ++ Y+ +I +C+ ++A L+ +M+EKG+
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PNVFTYN +I GFC G + R+L +M+++ P+ +F+ LI + G E K+
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 22/278 (7%)
Query: 238 NAKR-VFGDILDRGW--VPDATTYTV------LMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
N++R + G + ++G +P T T L G L DA+ D M +
Sbjct: 45 NSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFY 104
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV-IDLLCEEGKVEDACEL 347
V +I F + + A +L M R+ +P + + I C+ K+ +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR-IPLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA----------KKLFDEF-ERGSIPSLLT 396
+ +L + PD +T++H LC E +I EA LFD+ E G P ++T
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVIT 223
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
+NTLI G+C + EA L + MV KG+ +V TY ++ G CK+G+ K + +L +M
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+ P+ +S +I+ L + G+ + + S G
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+I+ + FD + + +L +P++ F T+I Y A R + ++
Sbjct: 398 TYNSMIYGFCKHNRFDDAKHMF-DLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLRE 452
Query: 140 IEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
I + + + + NTL++ + N DL M + V P+ TCNIL+
Sbjct: 453 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG-----VCPDTITCNILLYGF 507
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C+ + +E A+ + + + + + V + I+ G ++ A +F + G PD
Sbjct: 508 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 567
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY V++ G+ ++DA + +M+DNG EP+ TY +I K + ++ L+ +
Sbjct: 568 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 627
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
M + A K++ L +G+++ +
Sbjct: 628 MRSNGF-SGDAFTIKMVADLITDGRLDKS 655
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 167/296 (56%), Gaps = 1/296 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+V N L+ LC+ +V+ A ++D M G+ PN+VT+T + Y R +++A ++
Sbjct: 208 DVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLY 267
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
+++ +G +PD T + L+ G K GR ++A + EME G PN VTY ++I+ K
Sbjct: 268 EEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKA 327
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
++ E+ +LL +++ R V + ++D LC+EGK+++A ++++ L N P+
Sbjct: 328 QRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTY 387
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I LCK G + A+++ E E SI P+++T++++I G+ + + +A +M E
Sbjct: 388 TVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKE 447
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G++PNV TY +I G K + + + EML +G NK L+ GL ++G
Sbjct: 448 RGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNG 503
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 181/362 (50%), Gaps = 2/362 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+++ Y G E A R++ V V N+L+ L + D M ++ +
Sbjct: 179 SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV-DTMKR 237
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V PNV T + I C+++ V+ A + +EM G++P++VT + ++GG G
Sbjct: 238 DGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE 297
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A +F ++ G P+ TY +L+D K R +++ ++ E+ GV + + Y +++
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMD 357
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
CK K EA+++ L + P+ +ID LC+ G V+ A ++ + K+ P
Sbjct: 358 WLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISP 417
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ S+II+ L K G + +A E ERG P+++TY T+I G + A ++
Sbjct: 418 NVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVY 477
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+M+ +GVE N F + L+ G K G ++ + EM ++G + +++ LI+GL+++
Sbjct: 478 HEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKT 537
Query: 478 GN 479
GN
Sbjct: 538 GN 539
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 164/331 (49%), Gaps = 8/331 (2%)
Query: 151 SLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
++NT+L L ++ R D L +M + +V N L+ CK D+E A
Sbjct: 139 TVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGL---DVVGWNSLVDGYCKVGDMETAFA 195
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
V + M + G+ ++V + +++ G G+++ A+ + + G P+ TYT+ + Y
Sbjct: 196 VAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYC 255
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
+ + DA + +EM GV P+ VT ++ CK + EA L +M + P+
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHV 315
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DE 385
C +ID L + + ++ L ++ + + D + + ++ WLCKEGKI EAK +F
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
P+ +TY LI +C++ + A ++ +M EK + PNV T++ +I G K G
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ + EM ++G PN ++ +I+G ++
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFK 466
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 2/312 (0%)
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
L++ L + + D MF+++ PN T +LI ALCK +V+GA +VL EM
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHT-PNGVTYTVLIDALCKAGNVDGAEQVLSEME 411
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ PN+VT ++I+ G V RG + A ++ +RG P+ TY ++DG K
Sbjct: 412 EKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE 471
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
A+ V EM GVE N+ ++ K K +A L +M +R + +I
Sbjct: 472 AALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI 531
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSI 391
D L + G + A ++ + L KN +PD + + I+ LC GK EA+ +E + G
Sbjct: 532 DGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLK 591
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
P +TYNT+IA + +A +L + M ++PN+ TY+ LI G + G ++ +
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651
Query: 452 LEEMLDKGCFPN 463
L EM G P
Sbjct: 652 LNEMSSSGFSPT 663
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 208/476 (43%), Gaps = 48/476 (10%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + ++ +D A +F +A N + N TY +I L +A D E +L+E+++
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHA--LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412
Query: 107 NPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA----LVQN 162
I F ++I G A +++ + +V + T+++ L Q
Sbjct: 413 K-SISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE 471
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
D+ H M V N F + L+ L K +E A + EM G++ + V
Sbjct: 472 AALDVYHEMLCEG-----VEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVN 526
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+TT++ G G++ A +V ++ ++ +PDA Y V ++ LG+ +A ++EM+
Sbjct: 527 YTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQ 586
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
G++P++VTY MI A + K+ +A LL+ M + P+ +I L E G VE
Sbjct: 587 STGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVE 646
Query: 343 -------------------------DACELWKR----------LLRKNCMPDNAISSTII 367
AC +R ++ D + +T++
Sbjct: 647 KAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLV 706
Query: 368 HWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LC G +A + +E RG P +T+N LI G +S L A +D M+ G+
Sbjct: 707 RVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGIS 766
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
PNV T+N L+ G G E +L EM +G P+ ++ +L+ G + N+ E
Sbjct: 767 PNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVE 822
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 202/450 (44%), Gaps = 38/450 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S++ L RA DA ++ +K++ ++ + I Y + A + +
Sbjct: 212 YNSLVAGLCRAGEVDAARDMVDTMKRDG-VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEM 270
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V V +L+ L+ L ++ R+ + +F+ K PN T +LI L K
Sbjct: 271 VRKGVLPDVVTLSALVGGLCKDGRFSEAYALFRE-MEKIGAAPNHVTYCMLIDTLAKAQR 329
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ +L E+ S G+V +L+ +T ++ G I+ AK +F L P+ TYTV
Sbjct: 330 GNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTV 389
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDN-----------------------------------G 285
L+D K G + A +V+ EME+ G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
++PN VTYG +I+ K A ++ +ML + + +++ L + GK+E A
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509
Query: 346 ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGM 404
L++ + + + D+ +T+I L K G + A K+ E E+ +P + YN I +
Sbjct: 510 ALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCL 569
Query: 405 CESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
C + EA ++M G++P+ TYN +I + G + +++L M PN
Sbjct: 570 CMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNL 629
Query: 465 TSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++S LI GL+E+G + +++ ++SG
Sbjct: 630 ITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 200/423 (47%), Gaps = 18/423 (4%)
Query: 79 DTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI------TVIRNYGLAGRPEL 132
D YH ++ + F V+SL+ LK+N +I+ E LF ++ + +
Sbjct: 475 DVYHEMLCEGVEVNKF-IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDG 533
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR--------HKFKVVPN 184
KT F V + + N L +A+V N + + ++ K+ + P+
Sbjct: 534 LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593
Query: 185 VFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFG 244
T N +I A ++ A+++L+ M + PNL+T++T++ G G +E AK +
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLN 653
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDE-MEDNGVEPNEVTYGVMIEAFCKG 303
++ G+ P + T+ ++ + GR +D + + E M + G+ + Y ++ C
Sbjct: 654 EMSSSGFSPTSLTHRRVLQACSQ-GRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYN 712
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ +A +L++M R P + +I + G +++A + ++L P+ A
Sbjct: 713 GMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATF 772
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+T++ L G+I E+ + +E + RG PS LTY+ L+ G + + EA RL+ +MV
Sbjct: 773 NTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVG 832
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
KG P V TYN LI F K+G + + EM ++G P ++ +L+ G + N E
Sbjct: 833 KGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTE 892
Query: 483 VGK 485
V K
Sbjct: 893 VRK 895
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 140/311 (45%), Gaps = 40/311 (12%)
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP---DATTYTVLMD 263
+L EM G+ + VT T+L G G ++ A +++ RG D + L+D
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAA-ALAEVMVRGGGIGGLDVVGWNSLVD 182
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
GY K+G + A V + M+ GV + V Y ++ C+ + AR+++D M + P
Sbjct: 183 GYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEP 242
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
+ I C V+DA L++ ++RK +PD S ++ LCK+G+ EA LF
Sbjct: 243 NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302
Query: 384 DEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV----------------- 425
E E+ G+ P+ +TY LI + ++ E+ L ++V +GV
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362
Query: 426 ------------------EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
PN TY +LI CK GN ++L EM +K PN +F
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422
Query: 468 SLLIEGLYESG 478
S +I GL + G
Sbjct: 423 SSIINGLVKRG 433
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 172/380 (45%), Gaps = 44/380 (11%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I +R LL +K++ IK + T+I AG E A
Sbjct: 596 TYNTMIAAQSREGKTAKALKLLNGMKRS-SIKPNLITYSTLIVGLFEAGAVEKAKYLLNE 654
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLV---HLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + +L A Q +R DL+ H N+ + ++ N L++ LC
Sbjct: 655 MSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNA----GLCADITVYNTLVRVLC 710
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
A+ VL+EM G+ P+ +T ++ G+ G ++NA + +L G P+
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
T+ L+ G GR+ ++ V++EM+ G+EP+ +TY +++ + GK+S
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY--GKQSN--------- 819
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
KVE A L+ ++ K +P + + +I K G +
Sbjct: 820 -----------------------KVE-AVRLYCEMVGKGFLPKVSTYNALISDFSKVGMM 855
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+AK+LF+E + RG +P+ TY+ L++G + TE + DM EKG P+ T + +
Sbjct: 856 SQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915
Query: 436 IQGFCKIGNAKEGIRILEEM 455
+ F K G + E R+L+ +
Sbjct: 916 SRAFSKPGMSWEARRLLKNL 935
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D +Y V+M G+ + G L ++ EM GV + VT ++ C+ + A L
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEA-LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 314 DDMLQRKYVPSSALCC--KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ M++ + + ++D C+ G +E A + +R+ + D ++++ LC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 372 KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
+ G++ A+ + D +R + P+++TY I C + +A L+++MV KGV P+V
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES--GNE--GEVGKV 486
T + L+ G CK G E + EM G PN ++ +LI+ L ++ GNE +G+V
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 487 VS 488
VS
Sbjct: 341 VS 342
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 90/173 (52%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ PNV T N L+ L + + VL+EM G+ P+ +T+ ++ GY + + A
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
R++ +++ +G++P +TY L+ + K+G ++ A ++ +EM++ GV P TY +++ +
Sbjct: 825 RLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
K + E R L DM ++ + PS + + G +A L K L +
Sbjct: 885 SKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAEL 410
LLR + D + ++ ++G + L + +RG +T NT++ G+C +
Sbjct: 94 LLRSSESVDTVSYNVVMSGFSEQGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRV 153
Query: 411 TEAGRLWDDMVEKG--VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
A L + MV G +V +N L+ G+CK+G+ + + E M +G + ++
Sbjct: 154 DRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYN 213
Query: 469 LLIEGLYESG 478
L+ GL +G
Sbjct: 214 SLVAGLCRAG 223
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 183/371 (49%), Gaps = 2/371 (0%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ + A++ R + V + L++A + +F R+K P+V T
Sbjct: 195 GKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNK-GCKPDVVT 253
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+LIK CK ++ AIR L ++PS G P++++H IL G +A ++ +L
Sbjct: 254 YNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATML 313
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+G +P T+ +L++ + G L A+ V++ M +G PN ++ +I+ FC GK
Sbjct: 314 RKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGID 373
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A L+ M+ R P ++ LC++GKV+DA + +L K C P +T+I
Sbjct: 374 RAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 433
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L K GK A +L +E +G P L+T +++ G+ ++ EA + + + +
Sbjct: 434 DGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIR 493
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
PN F YN +I G CK I L +M+ KGC P + +++ LI+G+ G + K+
Sbjct: 494 PNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553
Query: 487 VSMATASGSVE 497
+ + G V+
Sbjct: 554 SNELYSRGLVK 564
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 39/332 (11%)
Query: 183 PNVFTCNILIK-----------------------------------ALCKKDDVEGAIRV 207
P+V C LI+ CK ++E A+RV
Sbjct: 112 PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV 171
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
LD MG+ PN T+ +L RG ++ A +V G L PD T TVL+D K
Sbjct: 172 LDR---MGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ A+K+ +EM + G +P+ VTY V+I+ FCKG + EA L + P
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
++ LC G+ DA +L +LRK C+P + +I++LC++G + +A + +
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP 348
Query: 388 R-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ G P+ ++N LI G C + A + MV +G P++ TYN+L+ CK G
Sbjct: 349 KHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVD 408
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + IL ++ KGC P+ S++ +I+GL + G
Sbjct: 409 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVG 440
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 168/340 (49%), Gaps = 7/340 (2%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ L + ++E R L+ M + G P+++ T ++ + G +NA ++ G + + G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
V D T+Y VL+ GY K G + +A++V+D M GV PN TY ++ + C K +A
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+L LQ K P C +ID C+E V A +L+ + K C PD + +I C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
K G++ EA + + G P ++++N ++ +C +A +L M+ KG P+V
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMA 490
T+N+LI C+ G + + +LE M G PN SF+ LI+G + + +
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382
Query: 491 TASGSV-ESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ G + ++N LLT + D +D L +L K C
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC 422
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 183/368 (49%), Gaps = 5/368 (1%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+IR + GR + A + +E+ V S N L++ ++ + + +
Sbjct: 119 ALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVL----DR 174
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V PN T + ++ +LC + ++ A++VL P++VT T ++ +
Sbjct: 175 MGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQ 234
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A ++F ++ ++G PD TY VL+ G+ K GRL +A++ + ++ G +P+ +++ +++
Sbjct: 235 AMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILR 294
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ C G + +A LL ML++ +PS +I+ LC++G + A + + + + P
Sbjct: 295 SLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP 354
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
++ + +I C I A + + RG P ++TYN L+ +C+ ++ +A +
Sbjct: 355 NSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 414
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ KG P++ +YN +I G K+G A+ + +LEEM KG P+ + + ++ GL
Sbjct: 415 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 474
Query: 478 GNEGEVGK 485
G E K
Sbjct: 475 GKVREAMK 482
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
+ + N LL AL ++ + D ++ K P++ + N +I L K E A+ +L
Sbjct: 391 IVTYNILLTALCKDGKVDDAVVILSQLSSK-GCSPSLISYNTVIDGLLKVGKAELAVELL 449
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
+EM G+ P+L+T T+++GG G + A + F + P+A Y ++ G K
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKS 509
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+ + A+ + +M G +P E TY +I+ + +A L +++ R V S
Sbjct: 510 QQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRS 566
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 110/257 (42%), Gaps = 14/257 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSH--NYDTYHSIIHKLARARAFD-AVESLLTE 103
L++ + ++ L AL + + P H N +++ +I + D A+E L
Sbjct: 327 LINFLCQKGLLGKALNVL----EMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382
Query: 104 LKQN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ + P+I L + ++ G+ + AV ++ S+ S NT+++ L++
Sbjct: 383 VSRGCYPDIVTYNILLTALCKD----GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 438
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ +L + + +K + P++ TC ++ L ++ V A++ + + PN
Sbjct: 439 VGKAELAVELLEEMCYK-GLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAF 497
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+ +I+ G A D++ +G P TYT L+ G G DA K+ +E+
Sbjct: 498 IYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557
Query: 282 EDNGVEPNEVTYGVMIE 298
G+ + V +E
Sbjct: 558 YSRGLVKRSLVEKVSLE 574
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 183/383 (47%), Gaps = 39/383 (10%)
Query: 166 DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTT 225
D L+ + RH K+ N N L+ ++ + VL EM S G+ P + T+T
Sbjct: 151 DARRLLDEMPRHGVKL--NACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTI 208
Query: 226 ILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
++ G GDI + VF +I + D Y+ +++ Y + G + A +V DE NG
Sbjct: 209 LVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNG 268
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+EPNE TYG +I FCK + A LL DM R + + +ID C G V+ A
Sbjct: 269 IEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKAL 328
Query: 346 EL-------------------------------WKRLLR---KNCMPDNAIS-STIIHWL 370
E+ K+LL +N + N +S +T+I
Sbjct: 329 EIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIH 388
Query: 371 CKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
KEG + EA++LF + E +GS PS++TYN +I G +S + EA R +M +KG+ P+V
Sbjct: 389 SKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDV 448
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
+TY L+ G C G +R+ EEM +G PN +++ LI GL + G E +
Sbjct: 449 YTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDN 508
Query: 490 ATASGSVESDS-WNFLLTRIVSD 511
A+G D+ ++ L+ + +D
Sbjct: 509 MLAAGLTPDDTLYSMLVGSLHTD 531
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 3/357 (0%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+ ++ R + V +L E++ ++ + ++ AG F I
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESG-GVEPTVGTYTILVDGLSTAGDISKVESVFDEI 229
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
++ NV V + ++NA + +F + PN T LI CK
Sbjct: 230 KRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGN-GIEPNERTYGALINGFCKIGQ 288
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+E A +L +M G+ N + T++ GY G ++ A + + G D TY
Sbjct: 289 IEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNT 348
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L G ++ R+ DA K++ M +NGVE N V+Y +I K EAR L DM +
Sbjct: 349 LACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKG 408
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
PS +ID + G + +A K + +K +PD + ++H C GK+ A
Sbjct: 409 SRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVAL 468
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+LF+E +RG+ P+++ Y LI+G+ + EA + +D+M+ G+ P+ Y+ML+
Sbjct: 469 RLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 147/326 (45%), Gaps = 3/326 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++ L+ A VES+ E+K+ + + VI Y AG A + F
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRK-NVAGDVYFYSAVINAYCRAGNVRRASEVFDE 263
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ + R+ L+N + + + ++ + + + V N N +I C+
Sbjct: 264 CVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLR-GVGHNQIIFNTMIDGYCRHG 322
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ A+ + M MG+ ++ T+ T+ G +E+AK++ + + G + +YT
Sbjct: 323 MVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYT 382
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ + K G + +A ++ +ME G P+ VTY VMI+ + K EA +M ++
Sbjct: 383 TLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKK 442
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP ++ C GKV+ A L++ + ++ P+ + +I L KEG+ EA
Sbjct: 443 GLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEA 502
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGM 404
+ +D G P Y+ L+ +
Sbjct: 503 FQFYDNMLAAGLTPDDTLYSMLVGSL 528
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY ++I+ + +A E LLT++ Q + + +F T+I Y G + A++
Sbjct: 272 NERTYGALINGFCKIGQIEAAEMLLTDM-QLRGVGHNQIIFNTMIDGYCRHGMVDKALEI 330
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKN------------------ 174
+E+ +Q V + NTL L + R + L+H+M +N
Sbjct: 331 KAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSK 390
Query: 175 ------SRHKFKVV------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+R F+ + P+V T N++I K + A R EM G+VP++ T
Sbjct: 391 EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYT 450
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ G+ G ++ A R+F ++ RG P+ YT L+ G K GR +A + D M
Sbjct: 451 YAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNML 510
Query: 283 DNGVEPNEVTYGVMIEAFCKGKKSGE 308
G+ P++ Y +++ + K+ E
Sbjct: 511 AAGLTPDDTLYSMLVGSLHTDKRKDE 536
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%)
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
L+ + ++ G C++ + +A RL D+M GV+ N YN L+ + + N +L+E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
M G P ++++L++GL +G+ +V V
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESV 225
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 177/363 (48%), Gaps = 4/363 (1%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+IR + GR +LA F K + +LN L+ L KR D M +
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG---MVPNLVTHTTILGGYVWRGDI 236
P+VF+ N LIK LC + + A+ +L M + G PN+V+++TI+ G+ G++
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
+ A +F +++ +G+ PD TY+ L+DG K + A ++ M D GV PN TY +M
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I +C + EA LL M P +I C+ G+ +A ++ ++RK
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGR 415
P++ I ++H +G + + + L D R IP +N LI + + +A
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
+ +M + G+ P+V +Y+ +I CKIG ++ + +M+ +G PN SF+ LI GL
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 459
Query: 476 ESG 478
G
Sbjct: 460 SIG 462
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 193/366 (52%), Gaps = 3/366 (0%)
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
R+ N L+ A ++ D F R + P+V + + +I LCK VE A+ +
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQN-GLRPDVVSYSTVIHILCKIGRVEDAVYHFN 437
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M S G+ PN+++ T+++ G G+ + + + ++++RG PDA +MD K G
Sbjct: 438 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 497
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R+ +A D + GV+PN V+Y +I+ +C K E+ D M+ P S
Sbjct: 498 RVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYN 557
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+++ + G+VEDA L++ + RK+ S+ I+H L + G+I A++L+ + +R
Sbjct: 558 ALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR 617
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G+ + TYNT++ G+CE++ + EA R+++D+ K E +V+T+N++I K+G E
Sbjct: 618 GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEA 677
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMATASGSVESDSWNFLLTR 507
+ M+ +G P+ ++SL+I+ E G E + +SM + +S N ++ R
Sbjct: 678 KSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRR 737
Query: 508 IVSDLD 513
++ D
Sbjct: 738 LLEKGD 743
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 194/416 (46%), Gaps = 73/416 (17%)
Query: 136 TFLRIEKFNVQRSVRSLNTLLNAL-VQNKRYDLVHLMFK-NSRHKFKVVPNVFTCNILIK 193
F R+ + V S N L+ L V+ K + + L+ + + PNV + + +I
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
K+ +V+ A + DEM G P++VT+++++ G + A+ + + D+G +P
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
+ TY +++ GY LG+L +AV+++ +M +G++P+ VTY ++I+ +CK + EAR++
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331
Query: 314 DDMLQRKYVPSSAL-------------CCKVIDLL----------------------CEE 338
D M+++ P+S + V DLL +
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 391
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA------------------- 379
G V+ A + + + PD ST+IH LCK G++ +A
Sbjct: 392 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451
Query: 380 -------------KKL----FDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
KK+ F+ RG P + NT++ +C+ + EA +D ++
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 511
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GV+PNV +YN LI G+C +G E I+ + M+ G P+ +++ L+ G +++G
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNG 567
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 209/485 (43%), Gaps = 19/485 (3%)
Query: 20 GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD 79
GG CS + ++ + I + F++ +D A F + F +
Sbjct: 195 GGYNCSPNVVSYSTIIDGF-------------FKEGEVDKAY--FLFDEMIGQGFPPDVV 239
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+I L +A+A + E++L + + + + +IR Y G+ E AV+ +
Sbjct: 240 TYSSLIDGLCKAQAMNKAEAILQHMF-DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKK 298
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ +Q V + L+ + R +F + K + PN +IL+ K
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQK-PNSTIYHILLHGYATKG 357
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ +LD M G+ ++ Y G ++ A F ++ G PD +Y+
Sbjct: 358 ALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 417
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ K+GR+ DAV ++M G+ PN +++ +I C + + L +M+ R
Sbjct: 418 TVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR 477
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P + ++D LC+EG+V +A + + ++ P+ +T+I C GK+ E+
Sbjct: 478 GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDES 537
Query: 380 KKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K FD G P TYN L+ G ++ + +A L+ +M K V+ T N+++ G
Sbjct: 538 IKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHG 597
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
+ G + +M+D+G +++ ++ GL E+ E ++ S E
Sbjct: 598 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFE-DLRSKEFEL 656
Query: 499 DSWNF 503
D W F
Sbjct: 657 DVWTF 661
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 6/252 (2%)
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL-DDMLQ 318
+L+ + +GRL A G VT +I+ C GK++ +A +++ M +
Sbjct: 99 ILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPE 158
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK---NCMPDNAISSTIIHWLCKEGK 375
Y P +I LC E K ++A EL + NC P+ STII KEG+
Sbjct: 159 LGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGE 218
Query: 376 IWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A LFDE +G P ++TY++LI G+C++ + +A + M +KGV PN TYN+
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV-SMATAS 493
+I+G+C +G +E +R+L++M G P+ ++ LLI+ + G E V SM
Sbjct: 279 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338
Query: 494 GSVESDSWNFLL 505
S ++ LL
Sbjct: 339 QKPNSTIYHILL 350
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 12/322 (3%)
Query: 63 IFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR 122
++H+ S N ++ S+IH L + VE L E+ N I T++
Sbjct: 433 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI-NRGIHPDAIFMNTIMD 491
Query: 123 NYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
N GR A F + V+ +V S NTL++ Y V M ++ + ++V
Sbjct: 492 NLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDG------YCFVGKMDESIKQFDRMV 545
Query: 183 -----PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIE 237
P+ +T N L+ K VE A+ + EM + +T IL G G I
Sbjct: 546 SIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIV 605
Query: 238 NAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMI 297
A+ ++ ++DRG TY ++ G + + +A+++ +++ E + T+ ++I
Sbjct: 606 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVI 665
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM 357
A K + EA++L M+ R VP +I EEG +E++ +L+ + + C
Sbjct: 666 NALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCA 725
Query: 358 PDNAISSTIIHWLCKEGKIWEA 379
D+ + + II L ++G + A
Sbjct: 726 ADSHMLNVIIRRLLEKGDVRRA 747
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I Y G+ + ++K F R+ ++ + N LLN +N R + +++ K
Sbjct: 523 TLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRK 582
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V T NI++ L + + A + +M G + T+ T+LGG ++
Sbjct: 583 -DVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDE 641
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A R+F D+ + + D T+ ++++ +K+GR+ +A + M G P+ +TY +MI+
Sbjct: 642 ALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIK 701
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ + E+ +L M + S + +I L E+G V A ++ KN
Sbjct: 702 SRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSV 761
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE 387
+ + ++ +I + ++ E K L +++
Sbjct: 762 EASTAALLIPIVSEKKYQKEVKFLPEKYH 790
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 170/326 (52%), Gaps = 2/326 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
+ + F V N+L+ LV D+ +F + + P+ FT N+L+ A+ K
Sbjct: 870 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMK-ELGCGPDEFTYNLLLDAMGKS 928
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+E ++V +EM G VT+ TI+ G V +E A ++ +++ +G+ P TY
Sbjct: 929 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 988
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+DG +K GR+ DA + +EM + G + N Y +++ + + +L DM+
Sbjct: 989 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 1048
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +ID LC+ G++ D +++LL PD + +I L K ++ E
Sbjct: 1049 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1108
Query: 379 AKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A LF+E + +G +P+L TYN+LI + ++ + EAG+++++++ KG +PNVFTYN LI+
Sbjct: 1109 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1168
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPN 463
G+ G+ M+ GC PN
Sbjct: 1169 GYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 162/332 (48%), Gaps = 37/332 (11%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ F C LIK LCK+ A ++ + S G+ + +++ G V I+ A+ +F
Sbjct: 845 DFFLCP-LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 903
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ + G PD TY +L+D K R+ + +KV +EM G E VTY +I K
Sbjct: 904 AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 963
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA------------------- 344
++ +A +L +++ + + P+ ++D L + G++EDA
Sbjct: 964 RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 1023
Query: 345 ----------------CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FE 387
C L++ ++ + PD + II LCK G++ + F + E
Sbjct: 1024 NILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 1083
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
G P L+TYN LI G+ +S L EA L+++M +KG+ PN++TYN LI K G A E
Sbjct: 1084 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1143
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
++ EE+L KG PN +++ LI G SG+
Sbjct: 1144 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1175
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 11/377 (2%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQR---------SVRSLNTLLNALVQNKRYDLVHL 170
V+ Y G VK+ E V R SVR+ + L+ A + + + V
Sbjct: 282 VLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 341
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+ + V PNV++ I I+ L + + A R+L +M + G P+++THT ++
Sbjct: 342 LLREM-EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G I +AK VF + PD TY L+D + G +++ + M+ +G N
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
V Y +I+A C+ + EA + D+M Q+ VP +I + + DA EL+K
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAE 409
+ P+ I++ K G+ +A + ++ + +G +P ++ N ++ G+ +S
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 580
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
L A R++ ++ GV P+ TY M+I+ K E ++I +M++ C P+ + +
Sbjct: 581 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 640
Query: 470 LIEGLYESGNEGEVGKV 486
LI+ LY++G E ++
Sbjct: 641 LIDTLYKAGRGDEAWRI 657
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 3/377 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T+ +I L A + + ++K++ + K +IT++ +G G + ++ +
Sbjct: 392 THTVLIQVLCDAGRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNA 450
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ +V + +++AL Q R MF + K +VP ++ N LI K D
Sbjct: 451 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK-GIVPEQYSYNSLISGFLKAD 509
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+ + M G PN TH + Y G+ A + + + +G VPD
Sbjct: 510 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 569
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++ G K GRL A +V E++ GV P+ +TY +MI+ K K EA + DM++
Sbjct: 570 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 629
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
VP +ID L + G+ ++A ++ +L N P + +T++ L +EGK+ E
Sbjct: 630 NCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 689
Query: 380 KKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
L +E + P+L+TYNT++ +C++ + +A + M KG P++ +YN +I G
Sbjct: 690 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 749
Query: 439 FCKIGNAKEGIRILEEM 455
K E I +M
Sbjct: 750 LVKEERYNEAFSIFCQM 766
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 174/353 (49%), Gaps = 8/353 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+V N +T N L+ L K A+ V M G+VP++ T++ ++ + R D+E
Sbjct: 281 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ G P+ +YT+ + + R +A +++ +ME+ G +P+ +T+ V+I+
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C + +A+++ M + P ++D + G + E+W ++ + DN
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN-AMKADGYNDN 459
Query: 361 AISST-IIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
++ T +I LC+ G+++EA ++FDE ++G +P +YN+LI+G ++ +A L+
Sbjct: 460 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 519
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M G +PN +T+ + I + K G + + I+ E M KG P+ + + ++ GL +SG
Sbjct: 520 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 579
Query: 479 NEGEVGKVVSMATASGSVESDSWNFLLT----RIVSDLDSGAGALDELLVKNC 527
G +V A G V D+ + + S D +++ NC
Sbjct: 580 RLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 631
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 213/466 (45%), Gaps = 22/466 (4%)
Query: 74 FSHNYDTYHSIIHKLAR-ARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGR 129
++ N Y ++I L + R F+A+E + E+KQ PE + + ++I + A R
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQKGIVPE----QYSYNSLISGFLKADR 510
Query: 130 PELAVKTFLRIE----KFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNV 185
A++ F ++ K N V +N + K LM +VP+V
Sbjct: 511 FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG-----IVPDV 565
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
N ++ L K + A RV E+ +MG+ P+ +T+T ++ + A ++F D
Sbjct: 566 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 625
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+++ VPD L+D K GR +A ++ ++++ +EP + TY ++ + K
Sbjct: 626 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 685
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
E +LL++M Y P+ ++D LC+ G V DA ++ + K C+PD + +T
Sbjct: 686 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNT 745
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD-MVEKG 424
+I+ L KE + EA +F + ++ IP T T++ + + EA + D ++ G
Sbjct: 746 VIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 805
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
+ + + + L++G K ++ I E + G + LI+ L + E
Sbjct: 806 SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 865
Query: 485 KVVSMATASG-SVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
++V + G S+++ +N L+ +V + +D G E+ C
Sbjct: 866 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 911
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
F+++ K +V +CN +++ + V V D M + N+ T I GG
Sbjct: 202 FRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 261
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G + +A + + G V +A TY L+ +K G +A++V M +GV P+
Sbjct: 262 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 321
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY V++ AF K + LL +M P+ I +L + + ++A + ++
Sbjct: 322 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 381
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAEL 410
+ C PD + +I LC G+I +AK +F + ++ P +TY TL+ ++ +
Sbjct: 382 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 441
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+W+ M G NV Y +I C++G E + + +EM KG P + S++ L
Sbjct: 442 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 501
Query: 471 IEGLYESGNEGEV 483
I G ++ G+
Sbjct: 502 ISGFLKADRFGDA 514
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF 383
++A C +++L+ G+V D E++ + R+ + + I L EG + A
Sbjct: 214 TTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL 273
Query: 384 DEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKI 442
E G + + TYN L+ + +S EA ++ M+ GV P+V TY++L+ F K
Sbjct: 274 PVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKR 333
Query: 443 GNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWN 502
+ + + +L EM G PN S+++ I L ++ E ++++ G +
Sbjct: 334 RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITH 393
Query: 503 FLLTRIVSDLDSGAGALD 520
+L +++ D + A D
Sbjct: 394 TVLIQVLCDAGRISDAKD 411
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 200/393 (50%), Gaps = 10/393 (2%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
R+ + V S NTLL KR +L+H+M +S+ + PNV + I+I
Sbjct: 155 RMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMM-ADSQGR-SCPPNVVSYAIVING 212
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
+ V+ A + EM G+ PN+VT+TT++ G ++ A+ VF ++D+G PD
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
TY L+ GY+ +G+ + V++++EM +G++P+ TYG ++ C + EAR L D
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M+++ P+ A+ +I +G + + +L ++ PD+ I + I K+
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
I EA +F++ ++G P ++ Y LI +C+ + +A ++ M+ +GV PN+F +N
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
L+ G C + ++ EML++G P+ F+ ++ L G + +++ +
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 494 GSVES-DSWNFLLTR--IVSDLDSGAGALDELL 523
G+ S+ L+ +V +D A +LD +L
Sbjct: 513 GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVML 545
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 203/453 (44%), Gaps = 46/453 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y +IH A A + LL + +N + ++F + Y + A+
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENG-LSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F ++++ + V + L++AL + R D L F N V PN+F N L+ LC
Sbjct: 401 FNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF-NQMMNEGVAPNIFVFNSLVYGLC 459
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDA 255
D E A EM + G+ P++V TIL +G + A+R+ D+++R G P
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI-DLMERVGTRPGV 518
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+YT L+ G+ +GR+ +A K +D M G++P+E TY ++ +C+
Sbjct: 519 ISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRA------------ 566
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
G+++DA +++ +LR P STI+H L +
Sbjct: 567 -----------------------GRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 376 IWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EAK+L+ + G ++ YN ++ G+ ++ + EA +L+ + K + + T+N+
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+I K G ++ + + + G P+ ++ L+ E L E G E + S SG
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 495 SV-ESDSWNFLLTRIVSDLD-SGAGA----LDE 521
+ S N L+ R++ D + AGA LDE
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLCKLDE 756
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 146/331 (44%), Gaps = 40/331 (12%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVL-DEMPSMGMVPNLVTHTTIL--------------- 227
N N L+K LC + A+ +L MP +G P++V++ T+L
Sbjct: 128 NNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187
Query: 228 -----------------------GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
G+ G ++ A +F +++DRG P+ TYT ++DG
Sbjct: 188 LHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDG 247
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K + A V +M D GV+P+ TY +I + K E +L++M P
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPD 307
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
+++ LC G+ +A L+ ++RK P+ AI +IH +G + E L +
Sbjct: 308 CYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN 367
Query: 385 -EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
E G P +N + + A + EA +++ M ++G+ P+V Y LI CK+G
Sbjct: 368 LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLG 427
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ + +M+++G PN F+ L+ GL
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 6/300 (2%)
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
++ + P+ T++ ++G + G +E+ FG IL GW + L+ G RL
Sbjct: 87 TIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLC 146
Query: 273 DAVKVM-DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD---DMLQRKYVPSSALC 328
+A+ ++ M + G P+ V+Y +++ FC K++ EA LL D R P+
Sbjct: 147 EAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSY 206
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-E 387
VI+ EG+V+ A L+ ++ + P+ +T+I LCK + A+ +F + +
Sbjct: 207 AIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID 266
Query: 388 RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
+G P TYN LI G + E R+ ++M G++P+ +TY L+ C G +E
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326
Query: 448 GIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLT 506
+ + M+ KG PN + +LI G G E+ ++++ +G S + +N + T
Sbjct: 327 ARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++++H RA D + E+ +N I G + T++ R A + +L
Sbjct: 555 TYNTLLHGYCRAGRIDDAYGVFREMLRNG-ITPGVVTYSTILHGLFTTRRFSEAKELYLN 613
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTCNILIKALCKK 198
+ Q ++ N +LN L +N D +F++ K F++ + T NI+I AL K
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQL--EITTFNIMIGALFKS 671
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
E A+ + + S G+VP++ T+ I + G +E +F + G P++
Sbjct: 672 GRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRML 731
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
L+ + G +T A + ++++ T ++I + + A +L
Sbjct: 732 NALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 215/452 (47%), Gaps = 14/452 (3%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR-AFDAVESL 100
L P+ + S+I R +L LA + F ++ K + H+ Y ++H L RAR +AV
Sbjct: 9 LEPRLVGSVIRRVPSLALARKFFDWSSK-QEGYRHDVYCYTRLLHHLVRARRTREAVRFF 67
Query: 101 LTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
EL + C +L F +I+ + P A + + + V + N +L
Sbjct: 68 KRELCAH----CRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKG 123
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
R + F K PNV T N +I LCK ++ A+ + +P + P
Sbjct: 124 YCDLGRVGRALIKFGKMGKTCK--PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDP 181
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ T++T++ G +E A +V+ +L+ + DA Y + DG+ K R+ +A++V+
Sbjct: 182 DGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVL 241
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGK-KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
M G +P+ VTY +I C+ K + EA L M+ P++ +I L +
Sbjct: 242 KTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSK 301
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
+V+ EL+K + + PD ++I+ K K+ EAK + + R + P +
Sbjct: 302 IYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYM 361
Query: 397 YNTLIAGMCESAE--LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
Y TLI+G C + + + EA L+ +M ++ V PNV TYN++++G CK G E +I +E
Sbjct: 362 YTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQE 421
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
M C PN+ +F ++ G+ G + ++
Sbjct: 422 MFKVKCSPNRMTFKVMTMGMIHCGKTDKFERI 453
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 35/249 (14%)
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G+ D YT L+ ++ R +AV+ P+ ++ ++I+ FC + G A
Sbjct: 39 GYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRA 98
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L M +P PD + ++
Sbjct: 99 WRYLGYMRSLG-IP----------------------------------PDVTAYNVVLKG 123
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C G++ A F + + P++ TYNT+I G+C+ ++ A L+ + V+P+
Sbjct: 124 YCDLGRVGRALIKFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDG 183
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
FTY+ L+ G C+ + I++ + ML+ + +++ + +G + E +V+
Sbjct: 184 FTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKT 243
Query: 490 ATASGSVES 498
G S
Sbjct: 244 MIQRGCKPS 252
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 201/426 (47%), Gaps = 9/426 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S+I+ + A E L T++ N ++ F T+I Y + E A K + +
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKM-INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM 489
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ + SV + L+ L +F + K+ P T N++I+ CK +
Sbjct: 490 NEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVER-KIKPTEVTYNVMIEGYCKAHN 548
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
++ A +L++M G+VP+ T+ ++ G G + AK D+ + + Y+
Sbjct: 549 MDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSA 608
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ GY GRLT+A+ EM G+ + V + V+I+ K + LL M +
Sbjct: 609 LLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG 668
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
P S + +ID +EG + + E ++ + C P+ + ++ LCK G+I A
Sbjct: 669 LRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAG 728
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
LF++ +I P+ +TY + + + + EA L +M+ KG+ N TYN+LI+GF
Sbjct: 729 HLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGF 787
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM--ATASGSVE 497
CK+G E ++L EM + G FP+ ++S +I YE G+VG V + VE
Sbjct: 788 CKLGRLIEATKVLSEMTENGIFPDCITYSTII---YEHCRSGDVGAAVELWDTMLRKGVE 844
Query: 498 SDSWNF 503
DS F
Sbjct: 845 PDSVAF 850
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 208/469 (44%), Gaps = 39/469 (8%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +++ R + FD L+ E+ + + E ++ G + A ++
Sbjct: 290 TYCTLVLGFCRVQQFDDGICLMNEMVELGFVPT-EAAVSGLVDGLRKKGNIDSAYDLVVK 348
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ +F ++ N L+NAL + + D L++KN H + N T +ILI + CK+
Sbjct: 349 LGRFGFLPNLFVYNALINALCKGEDLDKAELLYKN-MHSMNLPLNDVTYSILIDSFCKRG 407
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A M G+ + + +++ G+ GD+ A+ ++ +++ G P ATT+T
Sbjct: 408 MLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFT 467
Query: 260 VLMDGYIK-----------------------------------LGRLTDAVKVMDEMEDN 284
L+ GY K + +A K+ DEM +
Sbjct: 468 TLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVER 527
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
++P EVTY VMIE +CK +A LL+DML VP + +I LC G+V A
Sbjct: 528 KIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAA 587
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
+ L +KN + S ++H C +G++ EA E +RG L+ + LI G
Sbjct: 588 KDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDG 647
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ ++ L M ++G+ P+ Y +I + K G+ K+ L+ M+ + CFPN
Sbjct: 648 AMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPN 707
Query: 464 KTSFSLLIEGLYESGNEGEVGKVV-SMATASGSVESDSWNFLLTRIVSD 511
+++ + GL + G G + M TA+ S S ++ L + +
Sbjct: 708 VVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKE 756
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 222/507 (43%), Gaps = 89/507 (17%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL-------------- 104
LAL+ F++ G H N +H ++ ++H L + + F SLL L
Sbjct: 78 LALRFFNFLG-LHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKF 136
Query: 105 -KQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQN 162
+ + + K L F ++ +Y R AV + + VR+L+ +LN L++
Sbjct: 137 LESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRI 196
Query: 163 KRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVT 222
+++ LV +F S + V P+ +TC+ +I++LC+ D A + M S ++VT
Sbjct: 197 RKFILVWEVFDESVNA-GVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVT 255
Query: 223 HTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEME 282
+ ++ G G + A V + ++G D TY L+ G+ ++ + D + +M+EM
Sbjct: 256 YNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMV 315
Query: 283 DNGVEPNEVT-----------------------------------YGVMIEAFCKGKKSG 307
+ G P E Y +I A CKG+
Sbjct: 316 ELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLD 375
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL----LRKNCMPDNAI- 362
+A L +M + +ID C+ G ++ A + R+ +R+ P N++
Sbjct: 376 KAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLI 435
Query: 363 ------------------------------SSTIIHWLCKEGKIWEAKKLFDEFERGSI- 391
+T+I CK+ ++ +A KL+ E I
Sbjct: 436 NGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIA 495
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
PS+ T+ LI G+C + E+ EA +L+D+MVE+ ++P TYN++I+G+CK N + +
Sbjct: 496 PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFEL 555
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESG 478
LE+ML G P+ ++ LI GL +G
Sbjct: 556 LEDMLHNGLVPDTYTYRPLISGLCSTG 582
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 194/451 (43%), Gaps = 55/451 (12%)
Query: 58 DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF 117
DL+ F Y + T+ ++I + + L E+ + EI F
Sbjct: 443 DLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEK-EIAPSVYTF 501
Query: 118 ITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ--------NKRYDLVH 169
+I YGL E+A + L E V+R ++ N +++ +K ++L+
Sbjct: 502 TALI--YGLCSTNEMAEASKLFDEM--VERKIKPTEVTYNVMIEGYCKAHNMDKAFELLE 557
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
M N +VP+ +T LI LC V A +D++ + N + ++ +L G
Sbjct: 558 DMLHNG-----LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHG 612
Query: 230 YVWRGDIENA--------------------------------KRVFG---DILDRGWVPD 254
Y +G + A KR+FG + D+G PD
Sbjct: 613 YCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPD 672
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+ YT ++D Y K G + + +D M PN VTY + CK + A +L +
Sbjct: 673 SVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFE 732
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
ML P+S +D L +EG +++A +L +L K + + A + +I CK G
Sbjct: 733 KMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLG 791
Query: 375 KIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
++ EA K+ E E G P +TY+T+I C S ++ A LWD M+ KGVEP+ +N
Sbjct: 792 RLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFN 851
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNK 464
+LI G C G + + +ML +G P +
Sbjct: 852 LLIYGCCVNGALDKAFELRNDMLSRGLKPRQ 882
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 161/385 (41%), Gaps = 17/385 (4%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKC 112
+ N+D A ++ H + TY +I L A + + +L + +K
Sbjct: 545 KAHNMDKAFELLE--DMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK-NLKL 601
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN-ALVQNKRYDLVHLM 171
E + ++ Y GR A+ + + + + L++ A+ Q L L+
Sbjct: 602 NEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLL 661
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
K + P+ +I A K+ + + LD M + PN+VT+T + G
Sbjct: 662 KKMYDQGLR--PDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLC 719
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
G+I+ A +F +L P++ TY +D K G + +A + EM G+ N
Sbjct: 720 KVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTA 778
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++I FCK + EA +L +M + P +I C G V A ELW +
Sbjct: 779 TYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTM 838
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIP---------SLLTYNTLI 401
LRK PD+ + +I+ C G + +A +L D RG P L N L+
Sbjct: 839 LRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLM 898
Query: 402 AGMCESAELTEAGRLWDDMVEKGVE 426
G C + E+ A RL+ M+ + V+
Sbjct: 899 HGGCVTGEVDTALRLYHSMLTRAVK 923
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 193/408 (47%), Gaps = 9/408 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN---LFITVIRNYGLAGRPELA 133
N TY+ ++ L RA +LL E+ + G LF + RN G +
Sbjct: 132 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN----GDSKAM 187
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + K V + + LLN L ++ + + + + S +VP N LI
Sbjct: 188 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ-SLVNAGLVPTRVIYNTLIN 246
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
C+ ++EGA +M S + P+ +T+ ++ G I NA+ + ++ D G P
Sbjct: 247 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 306
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
T+ L+D Y + G+L V+ EM++NG++PN V+YG ++ AFCK K EA +L
Sbjct: 307 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
DDM + +P++ + +ID E G + A L +++ P + +I LC +
Sbjct: 367 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 426
Query: 374 GKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
+I EA+++ + IP ++YNTLI+ C + +A L M + G++ V TY
Sbjct: 427 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 486
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ LI G G E + ++M+ P+ ++++E + GNE
Sbjct: 487 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNE 534
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 154/297 (51%), Gaps = 1/297 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN F+ N++I + + A+ V DEM ++PN +T+ T++ G++ GD+E R+
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
++ G P+A TY VL+ G + GR+ + ++DEM + P+ TY ++ + +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
S +L L+ C +++ LC++GKV A E+ + L+ +P I
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+T+I+ C+ G++ A F + + I P +TYN LI G+C++ +T A L +M
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ GV P V T+N LI + + G ++ +L EM + G PN S+ ++ ++G
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 357
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 155/299 (51%), Gaps = 1/299 (0%)
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
+TC+IL+ LCK V A VL + + G+VP V + T++ GY G++E A FG
Sbjct: 204 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
+ R PD TY L++G K R+T+A ++ EM+DNGV P T+ +I+A+ + +
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ +L +M + P+ +++ C+ GK+ +A + + K+ +P+ + +
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
II + G +A L ++ + I PS++TYN LI G+C ++++EA + + +
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ P+ +YN LI C GN + + + + M G ++ LI GL +G E+
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 502
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 149/299 (49%), Gaps = 1/299 (0%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
V+PN T N +I K D+E R+ D+M G+ PN +T+ +L G G +
Sbjct: 94 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 153
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
+ ++ + VPD TY++L DG + G + + + NGV + T +++
Sbjct: 154 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 213
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK K A +L ++ VP+ + +I+ C+ G++E A + ++ ++ PD+
Sbjct: 214 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 273
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +I+ LCK +I A+ L E + G P++ T+NTLI + +L + + +
Sbjct: 274 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 333
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
M E G++PNV +Y ++ FCK G E + IL++M K PN ++ +I+ E G
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 392
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 128/317 (40%), Gaps = 72/317 (22%)
Query: 234 GDIENAKRVFGDILDRGWVPD------------------------------------ATT 257
G + +R FG + G PD A +
Sbjct: 6 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMED---------------------------------- 283
Y V++ G + GR DAV+V DEM +
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 284 -NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE 342
+G++PN +TY V++ C+ + GE LLD+M +K VP + D L G +
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185
Query: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI 401
L+ + L+ + S +++ LCK+GK+ A+++ G +P+ + YNTLI
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245
Query: 402 AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCF 461
G C++ EL A + M + ++P+ TYN LI G CK +L EM D G
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305
Query: 462 PNKTSFSLLIEGLYESG 478
P +F+ LI+ +G
Sbjct: 306 PTVETFNTLIDAYGRTG 322
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKK 381
P + K + G + +A + +R+ R P NA S + +I + + G+ +A +
Sbjct: 25 PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVE 84
Query: 382 LFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
+FDE ER +P+ +TYNT+I G + +L RL D MV G++PN TYN+L+ G C
Sbjct: 85 VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 144
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+ G E +L+EM + P+ ++S+L +GL +G+
Sbjct: 145 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 183
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 10/319 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P R+ L++ + L+ A F H H TY+++I+ L +A +
Sbjct: 236 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH--ITYNALINGLCKAERITNAQ 293
Query: 99 SLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
LL E++ N P ++ F T+I YG G+ E +++ ++ +V S ++
Sbjct: 294 DLLMEMQDNGVNPTVET----FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 349
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+NA +N + + + HK V+PN N +I A + + A ++++M S G
Sbjct: 350 VNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 408
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++VT+ ++ G + I A+ + + + +PDA +Y L+ G + A+
Sbjct: 409 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 468
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ M G++ TY +I + E L M+Q VPS+A+ +++
Sbjct: 469 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 528
Query: 336 CEEGKVEDACELWKRLLRK 354
+ G A +L K +L+K
Sbjct: 529 SKYGNEIKAEDLRKEMLQK 547
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
+ LGR D + + G P+ + ++A GEA +L M + P +
Sbjct: 3 LSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPN 62
Query: 326 ALCCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
A V I + G+ DA E++ + + +P++ +T+I K G + +L D
Sbjct: 63 AFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRD 122
Query: 385 EFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+ G P+ +TYN L++G+C + + E L D+M + + P+ FTY++L G + G
Sbjct: 123 QMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNG 182
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++K + + + L G + S+L+ GL + G
Sbjct: 183 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP--SLLT 396
G+ D + L PD + + G + EA + R P + +
Sbjct: 6 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
YN +IAGM + +A ++D+M E+ V PN TYN +I G K G+ + G R+ ++M+
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNFLLTRIVSDLDSG 515
G PN ++++L+ GL +G GE ++ MA+ + +++ L + + DS
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185
Query: 516 A 516
A
Sbjct: 186 A 186
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,168,155,473
Number of Sequences: 23463169
Number of extensions: 341736173
Number of successful extensions: 987597
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7257
Number of HSP's successfully gapped in prelim test: 5022
Number of HSP's that attempted gapping in prelim test: 778033
Number of HSP's gapped (non-prelim): 69781
length of query: 527
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 380
effective length of database: 8,910,109,524
effective search space: 3385841619120
effective search space used: 3385841619120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)