BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043284
(527 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/495 (68%), Positives = 411/495 (83%), Gaps = 1/495 (0%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 89
T PPIKPWPQRL+PKRLVSMI +QQN+DLALQIF YAGK HP F+HNYDTYHSI+ KL+
Sbjct: 35 TEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS 94
Query: 90 RARAFDAVESLLTELKQN-PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRS 148
RARAFD VESL+ +L+ + P IKCGENLFI ++RNYGLAGR E +++ FLRI F V+RS
Sbjct: 95 RARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRS 154
Query: 149 VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208
VRSLNTLLN L+QN+R+DLVH MFKNS+ F + PN+FTCN+L+KALCKK+D+E A +VL
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 209 DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268
DE+PSMG+VPNLVT+TTILGGYV RGD+E+AKRV ++LDRGW PDATTYTVLMDGY KL
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 269 GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALC 328
GR ++A VMD+ME N +EPNEVTYGVMI A CK KKSGEARN+ D+ML+R ++P S+LC
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER 388
CKVID LCE+ KV++AC LW+++L+ NCMPDNA+ ST+IHWLCKEG++ EA+KLFDEFE+
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK 394
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
GSIPSLLTYNTLIAGMCE ELTEAGRLWDDM E+ +PN FTYN+LI+G K GN KEG
Sbjct: 395 GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRI 508
+R+LEEML+ GCFPNKT+F +L EGL + G E + K+VSMA +G V+ +SW L +
Sbjct: 455 VRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKKF 514
Query: 509 VSDLDSGAGALDELL 523
+LD G L ELL
Sbjct: 515 AGELDKGVLPLKELL 529
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 261/489 (53%), Gaps = 15/489 (3%)
Query: 46 RLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELK 105
+L+ + Q + AL++F+ A K PNFS Y I+ +L R+ +FD ++ +L ++K
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 110
Query: 106 QNPEIKCGENLFITVIRNYG-LAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ + G + F+ +I +Y + E+ I++F ++ N +LN LV
Sbjct: 111 SS-RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNS 169
Query: 165 YDLVHLMFKNSRHKFKV---VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
LV + S K V P+V T N+LIKALC+ + AI +L++MPS G+VP+
Sbjct: 170 LKLVEI----SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEK 225
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T TT++ GY+ GD++ A R+ +++ G + V++ G+ K GR+ DA+ + EM
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 282 ED-NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGK 340
+ +G P++ T+ ++ CK A ++D MLQ Y P VI LC+ G+
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 341 VEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNT 399
V++A E+ +++ ++C P+ +T+I LCKE ++ EA +L +G +P + T+N+
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 400 LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
LI G+C + A L+++M KG EP+ FTYNMLI C G E + +L++M G
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 460 CFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSD--LDSGA 516
C + +++ LI+G ++ E ++ G S S ++N L+ + ++ A
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 517 GALDELLVK 525
+D+++++
Sbjct: 526 QLMDQMIME 534
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 201/400 (50%), Gaps = 2/400 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ +I L RA +L ++ + E F TV++ Y G + A++ +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVP-DEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ +F S S+N +++ + R + + ++ P+ +T N L+ LCK
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V+ AI ++D M G P++ T+ +++ G G+++ A V ++ R P+ TY
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ K ++ +A ++ + G+ P+ T+ +I+ C + A L ++M +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P +ID LC +GK+++A + K++ C +T+I CK K EA
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+++FDE E G + +TYNTLI G+C+S + +A +L D M+ +G +P+ +TYN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
FC+ G+ K+ I++ M GC P+ ++ LI GL ++G
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T N LI LCK++ VE A + + S G++P++ T +++ G + A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
F ++ +G PD TY +L+D G+L +A+ ++ +ME +G + +TY +I+ FCK
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
K+ EA + D+M +S +ID LC+ +VEDA +L +++ + PD
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
++++ C+ G I +A + G P ++TY TLI+G+C++ + A +L +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKG-CFPNKTSFSLLIEGLYESG 478
KG+ YN +IQG + E I + EML++ P+ S+ ++ GL G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 205/423 (48%), Gaps = 14/423 (3%)
Query: 74 FSHNYDTYHSIIHKLARA----RAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGR 129
F Y T++++++ L +A A + ++ +L E +P++ + +VI G
Sbjct: 292 FPDQY-TFNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYT----YNSVISGLCKLGE 345
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCN 189
+ AV+ ++ + + + NTL++ L + + + + + K ++P+V T N
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFN 404
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
LI+ LC + A+ + +EM S G P+ T+ ++ +G ++ A + +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G TY L+DG+ K + +A ++ DEME +GV N VTY +I+ CK ++ +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L+D M+ P ++ C G ++ A ++ + + C PD T+I
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 370 LCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG-VEP 427
LCK G++ A KL + +G + YN +I G+ + TEA L+ +M+E+ P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 428 NVFTYNMLIQGFCKIGNA-KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ +Y ++ +G C G +E + L E+L+KG P +S +L EGL E + K+
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704
Query: 487 VSM 489
V+M
Sbjct: 705 VNM 707
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 238/468 (50%), Gaps = 38/468 (8%)
Query: 42 LYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLL 101
L PK + ++I Q++ AL++F+ K F H TY S+I KL F+A+E +L
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRK-EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 102 TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++++N E +++ ++NYG G+ + AV F R++ ++ + +V S N +++ LV
Sbjct: 64 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ +D H ++ R + + P+V++ I +K+ CK A+R+L+ M S G N+V
Sbjct: 124 SGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 182
Query: 222 THTTILGGYVW-----------------------------------RGDIENAKRVFGDI 246
+ T++GG+ +GD++ +++ +
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG +P+ TY + + G + G L AV+++ + + G +P+ +TY +I CK K
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
EA L M+ P S +I C+ G V+ A + + +PD ++
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I LC EG+ A LF+E +G P+++ YNTLI G+ + EA +L ++M EKG+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
P V T+N+L+ G CK+G + +++ M+ KG FP+ +F++LI G
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 225/454 (49%), Gaps = 20/454 (4%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRPELAVKT 136
+Y++I+ L + FD + ++ P++ F ++++ RP A++
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYS----FTIRMKSFCKTSRPHAALRL 168
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQN----KRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ + +V + T++ + + Y+L M + V + T N L+
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG-----VSLCLSTFNKLL 223
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ LCKK DV+ ++LD++ G++PNL T+ + G RG+++ A R+ G ++++G
Sbjct: 224 RVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPK 283
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD TY L+ G K + +A + +M + G+EP+ TY +I +CKG A +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
+ D + +VP +ID LC EG+ A L+ L K P+ + +T+I L
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 373 EGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+G I EA +L +E E+G IP + T+N L+ G+C+ +++A L M+ KG P++FT
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMAT 491
+N+LI G+ + + IL+ MLD G P+ +++ L+ GL ++ +V +
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 492 ASGSVES-DSWNFLLTRIV--SDLDSGAGALDEL 522
G + ++N LL + LD G L+E+
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 216/454 (47%), Gaps = 13/454 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+++I+ L + F E L ++ N ++ + T+I Y G +LA + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKM-VNEGLEPDSYTYNTLIAGYCKGGMVQLA-ERIVG 345
Query: 140 IEKFNV----QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
FN Q + RSL ++ L + +F + K + PNV N LIK L
Sbjct: 346 DAVFNGFVPDQFTYRSL---IDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGL 401
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
+ + A ++ +EM G++P + T ++ G G + +A + ++ +G+ PD
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T+ +L+ GY ++ +A++++D M DNGV+P+ TY ++ CK K +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M+++ P+ +++ LC K+++A L + + K+ PD T+I CK G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 376 IWEAKKLFDEFERGS--IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ A LF + E S TYN +I E +T A +L+ +MV++ + P+ +TY
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+++ GFCK GN G + L EM++ G P+ T+ +I L E ++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 494 GSVESDSWNFLLTRIVSDLDSGAGALDELLVKNC 527
G V ++ N + ++ + L++LL K+C
Sbjct: 702 GLV-PEAVNTICDVDKKEVAAPKLVLEDLLKKSC 734
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 249/512 (48%), Gaps = 48/512 (9%)
Query: 62 QIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVI 121
++F A K +F T S+I A + FD+VE LL+ ++ + E FI V
Sbjct: 62 KMFKSAPKMG-SFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII-ERSFIVVF 119
Query: 122 RNYGLAGRPELAVKTFLR-IEKFNVQRSVRSLNTLLNALVQNKRYDL---VHLMFKNSRH 177
R YG A P+ AV F R +++F +RSV+S N++LN ++ Y + NS
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM 179
Query: 178 KFKVVPNVFTCNILIKALCK-----------------------------------KDDVE 202
+ PN + N++IKALCK ++ ++
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A+ +LDEM S G P+ V + ++ G +GD+ ++ ++ +G VP+ TY L+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
G G+L AV +++ M + PN+VTYG +I K +++ +A LL M +R Y
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
+ + +I L +EGK E+A LW+++ K C P+ + S ++ LC+EGK EAK++
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
+ G +P+ TY++L+ G ++ EA ++W +M + G N F Y++LI G C
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD-- 499
+G KE + + +ML G P+ ++S +I+GL G+ K+ +S
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 500 --SWNFLLTRIV--SDLDSGAGALDELLVKNC 527
++N LL + D+ L+ +L + C
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 209/435 (48%), Gaps = 14/435 (3%)
Query: 60 ALQIFHYA--GKFHPNFSHNYDTYHSIIHKLARARAFD-AVESLLTELKQNPEIKCGENL 116
L+ + Y + N S N +++ +I L + R D A+E + PE KC +
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF----RGMPERKCLPDG 222
Query: 117 FITVIRNYGLAG--RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKN 174
+ GL R + AV ++ S N L++ L + V + N
Sbjct: 223 YTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN 282
Query: 175 SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRG 234
K VPN T N LI LC K ++ A+ +L+ M S +PN VT+ T++ G V +
Sbjct: 283 MFLK-GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR 341
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+A R+ + +RG+ + Y+VL+ G K G+ +A+ + +M + G +PN V Y
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
V+++ C+ K EA+ +L+ M+ +P++ ++ + G E+A ++WK + +
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEA 413
C + S +I LC G++ EA ++ + G P + Y+++I G+C + A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 414 GRLWDDMV---EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+L+ +M+ E +P+V TYN+L+ G C + + +L MLD+GC P+ + +
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 471 IEGLYESGNEGEVGK 485
+ L E N + G+
Sbjct: 582 LNTLSEKSNSCDKGR 596
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 166/370 (44%), Gaps = 22/370 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGEN--LFITVIRNYGLAGRPELAV 134
N TY+++IH L D SLL + + KC N + T+I R AV
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSS---KCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 135 KTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
+ +E+ + + L++ L + + + +++ K PN+ ++L+
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLVDG 406
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
LC++ A +L+ M + G +PN T+++++ G+ G E A +V+ ++ G +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
Y+VL+DG +GR+ +A+ V +M G++P+ V Y +I+ C A L
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 315 DML---QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ML + K P ++D LC + + A +L +L + C PD +T ++ L
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 372 KEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
++ + + F E L+ + + ++ A + + M+ K + P T
Sbjct: 587 EKSNSCDKGRSFLE-------------ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTST 633
Query: 432 YNMLIQGFCK 441
+ M+++ CK
Sbjct: 634 WAMIVREICK 643
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 151/329 (45%), Gaps = 36/329 (10%)
Query: 80 TYHSIIHKLARAR-AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFL 138
TY ++I+ L + R A DAV LL+ +++ ++++ +I G+ E A+ +
Sbjct: 329 TYGTLINGLVKQRRATDAVR-LLSSMEERG-YHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 139 RIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKA 194
++ + + ++ + L++ L + N+ ++++ M + +PN +T + L+K
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG-----CLPNAYTYSSLMKG 441
Query: 195 LCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
K E A++V EM G N ++ ++ G G ++ A V+ +L G PD
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEM---EDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
Y+ ++ G +G + A+K+ EM E+ +P+ VTY ++++ C K A +
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561
Query: 312 LLDDMLQRKYVPSSALCCKVIDLL------CEEGK---------------VEDACELWKR 350
LL+ ML R P C ++ L C++G+ V AC + +
Sbjct: 562 LLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEV 621
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+L K P + + I+ +CK KI A
Sbjct: 622 MLGKYLAPKTSTWAMIVREICKPKKINAA 650
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 238/444 (53%), Gaps = 13/444 (2%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPN-FSHNYDTYHSIIHKLARARAFDA 96
W + + P +++ ++ +++++ ++ +F A + N + H+ ++ ++ +L A F A
Sbjct: 10 WSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKA 69
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E L+ +K + E++ +++ R YG RP +++ F +++ F+ S ++ T+L
Sbjct: 70 AEDLIVRMKIENCV-VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVL 128
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD-DVEGAIRVLDEMPSMG 215
LV+ + +L +KN R + + P V + N+LIKALC+ D V+ +++ EMP G
Sbjct: 129 AILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 187
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
P+ T+ T++ G G I+ AK++F +++++ P TYT L++G + +A+
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ ++EM+ G+EPN TY +++ CK +S +A L + M+ R P+ +I L
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C+E K+++A EL R+ + PD + +I C K EA DE G I P+
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Query: 395 LTYNT-------LIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKE 447
LT+N ++ G+C + + A L+ M +G+ V T L++ CK G ++
Sbjct: 368 LTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQK 426
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+++++E++ GC P+K ++ LLI
Sbjct: 427 AVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 17/312 (5%)
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+MFK S++ T + +IK + + DVE ++ V D + N H G
Sbjct: 6 MMFKWSKN--------ITPSQVIKLMRAEKDVEKSMAVFDS--ATAEYANGYVHDQSSFG 55
Query: 230 Y-VWRGDIENAKRVFGDILDRGWVPD-ATTYTVLMD---GYIKLGRLTDAVKVMDEMEDN 284
Y V R N + D++ R + + + +L+ GY ++ R D+++V +M+D
Sbjct: 56 YMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE-EGKVED 343
+P++ Y ++ + + A +M + P+ A +I LC +G V+
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIA 402
+++ + ++ C PD+ T+I LC+ G+I EAKKLF E E+ P+++TY +LI
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 235
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C S + EA R ++M KG+EPNVFTY+ L+ G CK G + + + + E M+ +GC P
Sbjct: 236 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 463 NKTSFSLLIEGL 474
N +++ LI GL
Sbjct: 296 NMVTYTTLITGL 307
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 11/335 (3%)
Query: 204 AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
++RV +M P+ + T+L V + A + + ++ + G P + VL+
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 264 GYIKLGRLTDA-VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+ DA +K+ EM G +P+ TYG +I C+ + EA+ L +M+++
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P+ +I+ LC V++A + + K P+ S+++ LCK+G+ +A +L
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F+ RG P+++TY TLI G+C+ ++ EA L D M +G++P+ Y +I GFC
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSL-------LIEGLYESGNEGEVGKVVSMATASG 494
I +E L+EM+ G PN+ ++++ ++ GL + +SM +
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGI 404
Query: 495 SVESDSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
SVE ++ L+ + + +DE++ C
Sbjct: 405 SVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGC 439
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 250/485 (51%), Gaps = 6/485 (1%)
Query: 38 WPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAV 97
+P+ L PK ++ ++ ++N A +F A + HP ++H+ YH I+ +L+ R + V
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATR-HPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLL 156
S + EL ++ E KC E++ ++VI+ YG P+ A+ F R+ E F + ++RS NTLL
Sbjct: 63 -SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
NA V+ K++ V +F V PN+ T N+LIK CKK + E A LD M G
Sbjct: 122 NAFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++ +++T++ G +++A +F ++ +RG PD T Y +L+DG++K A++
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240
Query: 277 VMDEM-EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
+ D + ED+ V PN T+ +MI K + + + + M Q + +I L
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLL 395
C+ G V+ A ++ L + D +T++ C+ GKI E+ +L+ E + +++
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 396 TYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM 455
+YN LI G+ E+ ++ EA +W M KG + TY + I G C G + + +++E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 456 LDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDS 514
G + +++ +I+ L + E +V + G + S N L+ ++ D
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 515 GAGAL 519
G +
Sbjct: 481 GEASF 485
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 219/476 (46%), Gaps = 54/476 (11%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ M +++ + A + K F + +Y ++I+ LA+A D L E+ +
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWK--EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 107 N---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSVRSLNTLLNALVQN 162
P++ C + +I + + A++ + R+ E +V +V++ N +++ L +
Sbjct: 213 RGVAPDVTC----YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 163 KRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
R D + M +N R K +++T + LI LC +V+ A V +E+
Sbjct: 269 GRVDDCLKIWERMKQNEREK-----DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 219 NLVTHTTILGGY-----------VWR-----------------------GDIENAKRVFG 244
++VT+ T+LGG+ +WR G I+ A ++
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 245 DILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+ +G+ D TTY + + G G + A+ VM E+E +G + Y +I+ CK K
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
+ EA NL+ +M + +S +C +I L + ++ +A + + + C P +
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 365 TIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I LCK GK EA E E G P L TY+ L+ G+C ++ A LW ++
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G+E +V +N+LI G C +G + + ++ M + C N +++ L+EG ++ G+
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGD 619
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 189/396 (47%), Gaps = 4/396 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY S+IH L A D ES+ EL + + + T++ + G+ + +++ + R
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDER-KASIDVVTYNTMLGGFCRCGKIKESLELW-R 349
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
I + ++ S N L+ L++N + D ++++ K + T I I LC
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNG 408
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
V A+ V+ E+ S G ++ + +I+ + +E A + ++ G ++
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ G I+ RL +A + EM NG P V+Y ++I CK K GEA + +ML+
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+ P ++ LC + K++ A ELW + L+ D + + +IH LC GK+ +A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
+ E R +L+TYNTL+ G + + A +W M + G++P++ +YN +++G
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
C + ++ + G FP ++++L+ +
Sbjct: 649 LCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
L+ + R + +DLAL+++H + ++ +IH L D +++ ++
Sbjct: 540 LLCGLCRDRKIDLALELWHQF--LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
C NL + T++ + G A + + K +Q + S NT++ L +
Sbjct: 598 R---NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
F ++R+ + P V+T NIL++A+ +
Sbjct: 655 VSYAMEFFDDARNH-GIFPTVYTWNILVRAVVNR 687
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 222/431 (51%), Gaps = 13/431 (3%)
Query: 52 FRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEI 110
RQ++ + LAL F + F H T+ +I KLA D+V+ LL ++K
Sbjct: 50 LRQESCVPLALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG-F 107
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
C E+LFI+VI Y G E AV+ F RI++F SV+ N +L+ L+ R ++++
Sbjct: 108 HCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 167
Query: 171 MFKN-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
++++ R F+ PNVFT N+L+KALCK + V+GA ++L EM + G P+ V++TT++
Sbjct: 168 VYRDMKRDGFE--PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ + L + P + Y L++G K A ++M EM + G+ PN
Sbjct: 226 MCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
++Y +I C + A + L ML+R P+ ++ G DA +LW
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 350 RLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCES 407
+++R + N ++ +T++ C G I +A +F E G P++ TY +LI G +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A +W+ M+ G PNV Y +++ C+ KE ++E M + C P+ +F
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 468 SLLIEGLYESG 478
+ I+GL ++G
Sbjct: 461 NAFIKGLCDAG 471
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 190/373 (50%), Gaps = 7/373 (1%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
+ +V S +TL+N L + + +L F K PN++T + L+K + A
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELA-FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 205 IRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMD 263
+ + ++M G+ PN+V + T++ G+ G+I A VF + + G P+ TY L++
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 264 GYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP 323
G+ K G L AV + ++M +G PN V Y M+EA C+ K EA +L++ M + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 324 SSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS-STIIHWLCKEGKIWEAKKL 382
S I LC+ G+++ A ++++++ +++ P N ++ + ++ L K +I EA L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 383 FDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
E F RG S TYNTL+ G C + A +L M+ G P+ T NM+I +CK
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 442 IGNAKEGIRILEEML--DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES- 498
G A+ ++L+ + + P+ S++ +I GL S + ++ ++G V S
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635
Query: 499 DSWNFLLTRIVSD 511
+W+ L+ + D
Sbjct: 636 ATWSVLINCFILD 648
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 211/400 (52%), Gaps = 6/400 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I +A + S+L + +P++ + T++R+ +G+ + A++ R
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVV----TYNTILRSLCDSGKLKQAMEVLDR 229
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + + V + L+ A ++ + R + P+V T N+L+ +CK+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GCTPDVVTYNVLVNGICKEG 288
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ L++MPS G PN++TH IL G +A+++ D+L +G+ P T+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+L++ + G L A+ ++++M +G +PN ++Y ++ FCK KK A L+ M+ R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P ++ LC++GKVEDA E+ +L K C P +T+I L K GK +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 380 KKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
KL DE + P +TY++L+ G+ ++ EA + + + G+ PN T+N ++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
CK I L M+++GC PN+TS+++LIEGL G
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 165/315 (52%), Gaps = 6/315 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VP++ C LI+ C+ A ++L+ + G VP+++T+ ++ GY G+I NA
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 242 VFGDILDRGWV-PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V LDR V PD TY ++ G+L A++V+D M P+ +TY ++IEA
Sbjct: 194 V----LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ G A LLD+M R P +++ +C+EG++++A + + C P+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 361 AISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ I+ +C G+ +A+KL D +G PS++T+N LI +C L A + +
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G +PN +YN L+ GFCK I LE M+ +GC+P+ +++ ++ L + G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 480 EGEVGKVVSMATASG 494
+ ++++ ++ G
Sbjct: 430 VEDAVEILNQLSSKG 444
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 173/340 (50%), Gaps = 7/340 (2%)
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
++ + + ++E + L+ M G VP+++ TT++ G+ G A ++ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
VPD TY V++ GY K G + +A+ V+D M V P+ VTY ++ + C K +A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+LD MLQR P +I+ C + V A +L + + C PD + +++ +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 372 KEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
KEG++ EA K ++ G P+++T+N ++ MC + +A +L DM+ KG P+V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL-YESGNEGEVGKVVSM 489
T+N+LI C+ G I ILE+M GC PN S++ L+ G E + + + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 490 ATASGSVESDSWNFLLTRIVSD--LDSGAGALDELLVKNC 527
+ + ++N +LT + D ++ L++L K C
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
N + M + EL E + ++MV G P++ LI+GFC++G ++ +ILE +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLLTRIVSD--LDSG 515
G P+ +++++I G ++G V+ + S V ++N +L + L
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV--TYNTILRSLCDSGKLKQA 223
Query: 516 AGALDELLVKNC 527
LD +L ++C
Sbjct: 224 MEVLDRMLQRDC 235
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 186/331 (56%), Gaps = 2/331 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + K++D+V + + ++V ++T NILI C++ + A+ +
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVV-ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+T L+ G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D M G +PN VTYGV++ CK + A NLL+ M K +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEF 386
+ID LC+ V+DA L+K + K P+ S++I LC G+ +A +L D
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E+ P+L+T+N LI + + EA +L+DDM+++ ++P++FTYN L+ GFC
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ ++ E M+ K CFP+ +++ LI+G +S
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 7/411 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLA--GRPELAVKTF 137
T+ ++IH L +L+ + Q C NL + GL G +LA+
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ V NT++++L + + D +FK K + PNV T + LI LC
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCS 307
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++L +M + PNLVT ++ +V G A++++ D++ R PD T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++G+ RL A ++ + M P+ VTY +I+ FCK K+ + L +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R V + +I L +G ++A +++K+++ PD S ++ LC GK+
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++FD ++ I + Y T+I GMC++ ++ + L+ + KGV+PNV TYN +I
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G C +E +L++M + G PN +++ LI G++ +++
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 210/433 (48%), Gaps = 36/433 (8%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ ++ +A+ + FD V SL E Q EI G + +I + + LA+ ++
Sbjct: 88 FNKLLSAIAKMKKFDVVISL-GEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYD-----------------------LVHLMFKNSRH 177
K + S+ +L++LLN KR L+H +F +++
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 178 KFKVV-----------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTI 226
V PN+ T +++ LCK+ D + A+ +L++M + + ++V TI
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 227 LGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV 286
+ +++A +F ++ +G P+ TY+ L+ GR +DA +++ +M + +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 287 EPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE 346
PN VT+ +I+AF K K EA L DDM++R P +++ C +++ A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 347 LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMC 405
+++ ++ K+C PD +T+I CK ++ + +LF E RG + +TY TLI G+
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 406 ESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKT 465
+ A +++ MV GV P++ TY++L+ G C G ++ + + + M +
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 466 SFSLLIEGLYESG 478
++ +IEG+ ++G
Sbjct: 507 IYTTMIEGMCKAG 519
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 3/380 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++ L + D +LL ++ + +I+ +F T+I + + A+
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ +V + ++L++ L R+ + + K K+ PN+ T N LI A
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFV 341
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A ++ D+M + P++ T+ +++ G+ ++ AK++F ++ + PD
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ K R+ D ++ EM G+ + VTY +I+ A+ + M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++D LC GK+E A E++ + + D I +T+I +CK GK+
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ LF +G P+++TYNT+I+G+C L EA L M E G PN TYN L
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 436 IQGFCKIGNAKEGIRILEEM 455
I+ + G+ ++ EM
Sbjct: 582 IRAHLRDGDKAASAELIREM 601
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG ++ +P + L+ K+ + + + ++M+ + TY +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FC+ + A LL M++ Y PS +++ C ++ DA L +++
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG 414
PD +T+IH L K EA L D +RG P+L+TY ++ G+C+ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L + M +E +V +N +I CK + + + + +EM KG PN ++S LI L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 475 YESGNEGEVGKVVS 488
G + +++S
Sbjct: 306 CSYGRWSDASQLLS 319
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 104/226 (46%), Gaps = 2/226 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
T+I+ + + R E + F + + + TL+ L + D +FK
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
V P++ T +IL+ LC +E A+ V D M + ++ +TT++ G G +++
Sbjct: 465 -GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
+F + +G P+ TY ++ G L +A ++ +M+++G PN TY +I
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
A + + L+ +M ++V ++ V ++L +G+++ +
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 183/331 (55%), Gaps = 2/331 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + K++DLV + + + N++T NILI C++ + A+ +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLV-ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+T L+ G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D M G +PN VTYGV++ CK A NLL+ M K +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEF 386
+ID LC+ V+DA L+K + K P+ S++I LC G+ +A +L D
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
E+ P+L+T+N LI + + EA +L DDM+++ ++P++FTYN LI GFC
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ ++ E M+ K CFP+ +++ LI+G +S
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 219/448 (48%), Gaps = 13/448 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P +L+S I + + DL + + + SHN TY+ +I+ R
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL--GISHNLYTYNILINCFCRRSQIS 62
Query: 96 AVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+LL +L P I +L + Y R AV ++ + + +
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 153 NTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
TL++ L + NK + V L+ + + + PN+ T +++ LCK+ D++ A +L++M
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ + ++V TI+ +++A +F ++ +G P+ TY+ L+ GR
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+DA +++ +M + + PN VT+ +I+AF K K EA L DDM++R P +
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I+ C +++ A ++++ ++ K+C PD +T+I CK ++ + +LF E RG
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ +TY TLI G+ + A +++ MV GV P++ TY++L+ G C G ++ +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + M + ++ +IEG+ ++G
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 198/411 (48%), Gaps = 7/411 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE--LAVKTF 137
T+ ++IH L +L+ + Q C NL + GL R + LA
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ V NT++++L + + D +FK K + PNV T + LI LC
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCS 232
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A ++L +M + PNLVT ++ +V G A+++ D++ R PD T
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y L++G+ RL A ++ + M P+ TY +I+ FCK K+ + L +M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
R V + +I L +G ++A +++K+++ PD S ++ LC GK+
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 378 EAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A ++FD ++ I + Y T+I GMC++ ++ + L+ + KGV+PNV TYN +I
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
G C +E +L++M + G P+ +++ LI G++ +++
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 184/380 (48%), Gaps = 3/380 (0%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N TY +++ L + D +LL ++ + +I+ +F T+I + + A+
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F +E ++ +V + ++L++ L R+ + + K K+ PN+ T N LI A
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFV 266
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K+ A ++ D+M + P++ T+ +++ G+ ++ AK++F ++ + PD
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY L+ G+ K R+ D ++ EM G+ + VTY +I+ A+ + M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ P ++D LC GK+E A E++ + + D I +T+I +CK GK+
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 377 WEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
+ LF +G P+++TYNT+I+G+C L EA L M E G P+ TYN L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 436 IQGFCKIGNAKEGIRILEEM 455
I+ + G+ ++ EM
Sbjct: 507 IRAHLRDGDKAASAELIREM 526
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 8/340 (2%)
Query: 77 NYDTYHSIIHKL-ARARAFDAVESL--LTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY S+I L + R DA + L + E K NP + F +I + G+ A
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT----FNALIDAFVKEGKFVEA 274
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K + K ++ + + N+L+N + R D MF+ K P++ T N LIK
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK-DCFPDLDTYNTLIK 333
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE + EM G+V + VT+TT++ G GD +NA++VF ++ G P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY++L+DG G+L A++V D M+ + ++ + Y MIE CK K + +L
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + P+ +I LC + +++A L K++ +PD+ +T+I ++
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEA 413
G + +L E + L+A M L ++
Sbjct: 514 GDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 553
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 209/417 (50%), Gaps = 19/417 (4%)
Query: 113 GENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF 172
G + ++RN + + + A+ F + K S+ N LL+A+ + K++DLV +
Sbjct: 49 GSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV-ISL 107
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
+ + N++T NILI C++ + A+ +L +M +G P++VT +++L GY
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
I +A + +++ G+ PD T+T L+ G + ++AV ++D M G +PN VT
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
YGV++ CK A NLL+ M K + + VID LC+ +DA L+ +
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELT 411
K P+ S++I LC + +A +L D ER P+++T+N LI + +L
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +L+D+M+++ ++P++FTY+ LI GFC E + E M+ K CFPN +++ LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 472 EG-------------LYESGNEGEVGKVVSMATASGSV----ESDSWNFLLTRIVSD 511
G E G VG V+ T + D+ + ++VSD
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 225/448 (50%), Gaps = 13/448 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P +L+S I + + DL + + + SHN TY+ +I+ R
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL--GISHNLYTYNILINCFCRRSQIS 137
Query: 96 AVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
+LL +L P I +L + Y R AV ++ + + +
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 153 NTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
TL++ L + NK + V L+ + + + PN+ T +++ LCK+ D++ A +L++M
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+ + N+V ++T++ ++A +F ++ ++G P+ TY+ L+ R
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
+DA +++ +M + + PN VT+ +I+AF K K EA L D+M++R P +
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 332 IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGS 390
I+ C ++++A +++ ++ K+C P+ +T+I+ CK +I E +LF E +RG
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 391 IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIR 450
+ + +TY TLI G ++ + A ++ MV GV PN+ TYN L+ G CK G ++ +
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 451 ILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ E + P +++++IEG+ ++G
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 195/387 (50%), Gaps = 7/387 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPE--LAVKTF 137
T+ ++IH L +L+ + Q C NL + GL R + LA
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQR---GCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++E ++ +V +T++++L + + D +F +K V PNV T + LI LC
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCN 307
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ A R+L +M + PN+VT ++ +V G + A++++ +++ R PD T
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ L++G+ RL +A + + M PN VTY +I FCK K+ E L +M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR V ++ +I + ++A ++K+++ P+ +T++ LCK GK+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +F+ +R + P++ TYN +I GMC++ ++ + L+ + KGV+P+V YN +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPN 463
GFC+ G +E + +M + G P+
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 171/352 (48%), Gaps = 15/352 (4%)
Query: 47 LVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+V+ + ++ ++DLA + + A K N Y ++I L + R D +L TE+
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVV----IYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+ P + +L I+ + NY R A + + + + +V + N L++A V+
Sbjct: 287 ENKGVRPNVITYSSL-ISCLCNYE---RWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
+ ++ + K + P++FT + LI C D ++ A + + M S PN+V
Sbjct: 343 EGKLVEAEKLY-DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+ T++ G+ I+ +F ++ RG V + TYT L+ G+ + +A V +M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+GV PN +TY +++ CK K +A + + + + K P+ +I+ +C+ GKV
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
ED +L+ L K PD I +T+I C++G EA LF + E G +P
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
TY S+I+ D + + EL + + C N+ + T+I + A R + V+ F
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMF-ELMISKD--CFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+ + + + + TL++ Q + D ++FK V PN+ T N L+ LCK
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCK 482
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+E A+ V + + M P + T+ ++ G G +E+ +F + +G PD
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
Y ++ G+ + G +A + +M ++G P+ T
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 232/484 (47%), Gaps = 57/484 (11%)
Query: 50 MIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+I + + DL L+ + + K + + S + + ++H LA A+ + + S L +N
Sbjct: 74 LISSELDPDLCLRYYSWLVK-NSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGS 132
Query: 110 IKCGENLFITV----------------IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
++F + + Y R EL + F R + + S S
Sbjct: 133 DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCK 192
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
L+ AL++ R V ++K + K+ PNVFT N++I ALCK + A V+++M
Sbjct: 193 PLMIALLKENRSADVEYVYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKV 251
Query: 214 MGMVPNLVTHTTILGGY-------------------------------------VWRGD- 235
G PN+V++ T++ GY W+ D
Sbjct: 252 YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ + +VF ++LD+ P+ +Y L++G G++++A+ + D+M GV+PN +TY
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I FCK EA ++ + + VP++ + +ID C+ GK++D L + + R+
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD + +I LC+ G I AKKLFD+ +P L+T++ L+ G C E +A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAM 491
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEM-LDKGCFPNKTSFSLLIEGL 474
L +M + G++P TYN++++G+CK GN K + +M ++ N S+++L++G
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 475 YESG 478
+ G
Sbjct: 552 SQKG 555
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 190/354 (53%), Gaps = 2/354 (0%)
Query: 122 RNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV 181
RN L + + AV F + K S+ + LL+A+ + K++DLV + F V
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLV-ISFGEKMEILGV 96
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
N++T NI+I LC++ + A+ +L +M +G P++VT ++L G+ I A
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ +++ G+ PD T+T L+ G + + ++AV +++ M G +P+ VTYG +I C
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
K + A NLL+ M + K + VID LC+ V+DA L+ + K PD
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 362 ISSTIIHWLCKEGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
S++I LC G+ +A +L D ER P+++T+N+LI + +L EA +L+D+M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+++ ++PN+ TYN LI GFC E +I M+ K C P+ +++ LI G
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 229/450 (50%), Gaps = 17/450 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHP-NFSHNYDTYHSIIHKLARARAF 94
+P+P + +L+S I + + DL + + K SHN TY+ +I+ L R
Sbjct: 60 RPFPSIVEFSKLLSAIAKMKKFDL---VISFGEKMEILGVSHNLYTYNIMINCLCRRSQL 116
Query: 95 D---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRS 151
A+ + +L P I +L + + R AV ++ + Q +
Sbjct: 117 SFALAILGKMMKLGYGPSIVTLNSL----LNGFCHGNRISEAVALVDQMVEMGYQPDTVT 172
Query: 152 LNTLLNALVQ-NKRYDLVHLMFKNSRHKFK-VVPNVFTCNILIKALCKKDDVEGAIRVLD 209
TL++ L Q NK + V L+ R K P++ T +I LCK+ + + A+ +L+
Sbjct: 173 FTTLVHGLFQHNKASEAVALV---ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + ++V ++T++ +++A +F ++ ++G PD TY+ L+ G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +DA +++ +M + + PN VT+ +I+AF K K EA L D+M+QR P+
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLF-DEFER 388
+I+ C ++++A +++ ++ K+C+PD +T+I+ CK K+ + +LF D R
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G + + +TY TLI G ++++ A ++ MV GV PN+ TYN L+ G CK G ++
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + E + P+ +++++ EG+ ++G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 218/443 (49%), Gaps = 13/443 (2%)
Query: 80 TYHSIIHKLAR----ARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVK 135
T+ +++H L + + A VE ++ + Q + G VI G P+LA+
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG-----AVINGLCKRGEPDLALN 226
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++EK ++ V +T++++L + + D +F +K + P+VFT + LI L
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLISCL 285
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C A R+L +M + PN+VT +++ + G + A+++F +++ R P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L++G+ RL +A ++ M P+ VTY +I FCK KK + L D
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M +R V ++ +I + ++A ++K+++ P+ +T++ LCK GK
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A +F+ ++ + P + TYN + GMC++ ++ + L+ + KGV+P+V YN
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+I GFCK G +E + +M + G P+ +++ LI G++ +++ +
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 495 SVESDSWNFLLTRIVSD--LDSG 515
S L+T ++ D LD G
Sbjct: 586 FAGDASTYGLVTDMLHDGRLDKG 608
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 36/156 (23%)
Query: 375 KIWEAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ EA LF E + PS++ ++ L++ + + + + M GV N++TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 434 MLI-----------------------------------QGFCKIGNAKEGIRILEEMLDK 458
++I GFC E + ++++M++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P+ +F+ L+ GL++ E +V G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 200/397 (50%), Gaps = 19/397 (4%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ + LL+A+ + ++DLV + + N++T +ILI
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLV-ISLGEQMQNLGISHNLYTYSILI 123
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G P++VT ++L G+ I +A + G +++ G+
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD+ T+ L+ G + R ++AV ++D M G +P+ VTYG+++ CK A +L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L M Q K P + +ID LC V DA L+ + K P+ +++I LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G+ +A +L D ER P+++T++ LI + +L EA +L+D+M+++ ++P++FT
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG-------------LYESG 478
Y+ LI GFC E + E M+ K CFPN +++ LI+G E
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 479 NEGEVGKVVSMATASGSV----ESDSWNFLLTRIVSD 511
G VG V+ T E D+ + ++VSD
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 209/425 (49%), Gaps = 6/425 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ ++ +A+ FD V SL E QN I + +I + + LA+ ++
Sbjct: 84 FSKLLSAIAKMNKFDLVISL-GEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
K + + +LN+LLN R D V L+ + ++ P+ FT N LI L + +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ--PDSFTFNTLIHGLFRHN 200
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
A+ ++D M G P+LVT+ ++ G RGDI+ A + + P Y
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
++D + DA+ + EM++ G+ PN VTY +I C + +A LL DM++R
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
K P+ +ID +EGK+ +A +L+ +++++ PD S++I+ C ++ EA
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 380 KKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
K +F+ + P+++TYNTLI G C++ + E L+ +M ++G+ N TY LI G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES 498
F + + ++M+ G P+ ++S+L++GL +G + E VV +E
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG-KVETALVVFEYLQRSKMEP 499
Query: 499 DSWNF 503
D + +
Sbjct: 500 DIYTY 504
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 227/451 (50%), Gaps = 16/451 (3%)
Query: 80 TYHSIIHKLARA-RAFDAVESLLTELKQNPEIK-CGENLFITVIRNYGLAGRPE--LAVK 135
T++++IH L R RA +AV L +K C +L I GL R + LA+
Sbjct: 188 TFNTLIHGLFRHNRASEAVA-----LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
++E+ ++ V NT+++AL K + +F +K + PNV T N LI+ L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCL 301
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C A R+L +M + PN+VT + ++ +V G + A++++ +++ R PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY+ L++G+ RL +A + + M PN VTY +I+ FCK K+ E L +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M QR V ++ +I + + ++A ++K+++ +PD S ++ LC GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ A +F+ +R + P + TYN +I GMC++ ++ + L+ + KGV+PNV TY
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ GFC+ G +E + EM ++G P+ +++ LI G++ +++ +
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Query: 495 SVESDSWNFLLTRIVSDLDSGAGALDELLVK 525
V S L+T ++ D G LD+ +K
Sbjct: 602 FVGDASTIGLVTNMLHD-----GRLDKSFLK 627
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 177/405 (43%), Gaps = 46/405 (11%)
Query: 20 GGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD 79
G +LS + K P + ++ + +N++ AL +F + N
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD--NKGIRPNVV 292
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+S+I L + LL+++ K NP + F +I + G+ A K
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT----FSALIDAFVKEGKLVEAEKL 348
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + K ++ + + ++L+N + R D MF+ K PNV T N LIK C
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFC 407
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K V+ + + EM G+V N VT+TT++ G+ + +NA+ VF ++ G +PD
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY++L+DG G++ A+ V + ++ + +EP+ TY +MIE CK
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA------------- 514
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
GKVED +L+ L K P+ +T++ C++G
Sbjct: 515 ----------------------GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
EA LF E E G +P TYNTLI + + L +M
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FGD++ P ++ L+ K+ + + + ++M++ G+ N TY +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
+I FC+ G + +A +L+ M++
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P S +I L + +A L R++ K C PD +++ LCK G I A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 381 KLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + E+G I P ++ YNT+I +C + +A L+ +M KG+ PNV TYN LI+
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ PN +FS LI+ + G E K+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 195/383 (50%), Gaps = 37/383 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ + LL+A+ + ++D+V + + N +T +ILI
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV-ISLGEQMQNLGIPHNHYTYSILI 123
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G PN+VT +++L GY I A + + G+
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ T+ L+ G + ++A+ ++D M G +P+ VTYGV++ CK + A NL
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC- 371
L+ M Q K P + +ID LC+ ++DA L+K + K P+ S++I LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 372 ----------------------------------KEGKIWEAKKLFDEFERGSI-PSLLT 396
KEGK+ EA+KL+DE + SI PS++T
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y++LI G C L EA ++++ MV K P+V TYN LI+GFCK +EG+ + EM
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 457 DKGCFPNKTSFSLLIEGLYESGN 479
+G N ++++LI+GL+++G+
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGD 446
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 224/464 (48%), Gaps = 25/464 (5%)
Query: 30 TVTPPIKPWPQRLYPKRLVSMIFRQQ---------NLDLALQIFHYAGKFHPNFSHNYDT 80
TV+P + +R + + S +R++ LD A+ +F K P S
Sbjct: 27 TVSPSFSFFWRRAFSGK-TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPS--IIE 83
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ ++ +A+ FD V SL E QN I + +I + + LA+ ++
Sbjct: 84 FSKLLSAIAKMNKFDVVISL-GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYD----LVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
K + ++ +L++LLN +KR LV MF PN T N LI L
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ-----PNTVTFNTLIHGLF 197
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+ A+ ++D M + G P+LVT+ ++ G RGD + A + + P
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y ++DG K + DA+ + EME G+ PN VTY +I C + +A LL DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++RK P +ID +EGK+ +A +L+ +++++ P S++I+ C ++
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 377 WEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
EAK++F EF + P ++TYNTLI G C+ + E ++ +M ++G+ N TYN+
Sbjct: 378 DEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LIQG + G+ I +EM+ G PN +++ L++GL ++G
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 228/503 (45%), Gaps = 44/503 (8%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGK--FHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L++ R+ L LAL + K + PN + H + A V+ +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
Q + F T+I L + A+ R+ Q + + ++N L +
Sbjct: 182 YQPNTVT-----FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
DL + N + K+ P V N +I LCK ++ A+ + EM + G+ PN+VT++
Sbjct: 237 TDLAFNLL-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
+++ G +A R+ D+++R PD T++ L+D ++K G+L +A K+ DEM
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED- 343
++P+ VTY +I FC + EA+ + + M+ + P +I C+ +VE+
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 344 ----------------------------------ACELWKRLLRKNCMPDNAISSTIIHW 369
A E++K ++ P+ +T++
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 370 LCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LCK GK+ +A +F+ +R + P++ TYN +I GMC++ ++ + L+ ++ KGV+P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
V YN +I GFC+ G+ +E + +EM + G PN ++ LI G+ +++
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 489 MATASGSVESDSWNFLLTRIVSD 511
+ G S L+T ++ D
Sbjct: 596 EMRSCGFAGDASTIGLVTNMLHD 618
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 10/269 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFH--PNFSHNYDTYHSIIHKLARARAFDA 96
P + L++ LD A Q+F + H P+ TY+++I + + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV----TYNTLIKGFCKYKRVEE 414
Query: 97 VESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
+ E+ Q + G + + +I+ AG ++A + F + V ++ + NTL
Sbjct: 415 GMEVFREMSQRGLV--GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L+ L +N + + ++F+ + K+ P ++T NI+I+ +CK VE + + G
Sbjct: 473 LDGLCKNGKLEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++V + T++ G+ +G E A +F ++ + G +P++ Y L+ ++ G +
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+++ EM G + T G++ G+
Sbjct: 592 ELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLT 396
E K++DA L+ +++ P S ++ + K K L ++ + IP + T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y+ LI C ++L A + M++ G EPN+ T + L+ G+C E + ++++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 457 DKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G PN +F+ LI GL+ E ++ A G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 89/572 (15%)
Query: 1 MLRHLHQKITAPSCLLQSIGGARCS-------LSTITVTPPIKPWPQRLYP---KRLVSM 50
R + Q + PS + +S +S + PI+P + L P K +++
Sbjct: 6 FFRSVIQFYSKPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALEPLVPFLSKNIITS 65
Query: 51 IFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPE 109
+ + + N L + F +A + S ++ +I L+ D L ELK
Sbjct: 66 VIKDEVNRQLGFRFFIWASRRERLRSRE--SFGLVIDMLSEDNGCDLYWQTLEELKSGG- 122
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
+ F +I Y G E AV++F R+++F+ + V + N +L +++ + + ++
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLA 182
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
N K PN++T IL+ L KK A ++ D+M G+ PN VT+T ++ G
Sbjct: 183 FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG---- 285
RG ++A+++F ++ G PD+ + L+DG+ KLGR+ +A +++ E +G
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302
Query: 286 -------------------------------VEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
++P+ + Y ++I+ K K +A LL
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M + P + VI LC G +E+ L + PD + +I +C+ G
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 375 KIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEA-------------------- 413
+ EA+++F E E+ G PS+ T+N LI G+C+S EL EA
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 414 ---GRLWDDMVEK----------------GVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
R +D MVE G P++ +YN+LI GFC+ G+ +++L
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+ KG P+ +++ LI GL+ G E E K+
Sbjct: 543 LQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN--AKRVFGDIL 247
+LI A K E A+ M P++ T+ IL + R ++ A V+ ++L
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-VMMREEVFFMLAFAVYNEML 190
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
P+ T+ +LMDG K GR +DA K+ D+M G+ PN VTY ++I C+ +
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
+AR L +M P S ++D C+ G++ +A EL + + + S++I
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
L + + +A +L+ + +I P ++ Y LI G+ ++ ++ +A +L M KG+
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ + YN +I+ C G +EG + EM + FP+ + ++LI + +G E ++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 487 VSMATASG 494
+ SG
Sbjct: 431 FTEIEKSG 438
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 11/350 (3%)
Query: 75 SHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEIKCGENLFITVIRNYGLAGRPEL 132
S N TY +I L + + D L E++ N N ++ + GR
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN---ALLDGFCKLGRMVE 286
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + EK +R ++L++ L + +RY ++ N K + P++ ILI
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK-NIKPDIILYTILI 345
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+ L K +E A+++L MPS G+ P+ + ++ RG +E + + ++ +
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PDA T+T+L+ + G + +A ++ E+E +G P+ T+ +I+ CK + EAR L
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 313 LDDMLQRK----YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
L M + ++ S + D + E G + A PD + +I+
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 369 WLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
C+ G I A KL + + +G P +TYNTLI G+ EA +L+
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Query: 329 CKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE-AKKLFDEFE 387
C +I + G E A E + R+ +C PD + I+ + +E + A +++E
Sbjct: 131 CVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEML 190
Query: 388 RGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+ + P+L T+ L+ G+ + ++A +++DDM +G+ PN TY +LI G C+ G+A
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ ++ EM G +P+ + + L++G + G E +++ + G V
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 161/414 (38%), Gaps = 57/414 (13%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEI--KCGENLFITVIRNYGLAGRPELAVKTFL 138
Y+++I L + SL E+ + C + I + GL E + F
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE---EIFT 432
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKV--VPNVF-----TCNIL 191
IEK SV + N L++ L ++ L+ HK +V ++F + N
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLL----HKMEVGRPASLFLRLSHSGNRS 488
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
+ + + A R L G P++V++ ++ G+ GDI+ A ++ + +G
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD+ TY L++G ++GR +A K+ +D
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFYAKDD---------------------------- 580
Query: 312 LLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK-NCMPDNAISSTIIHWL 370
+ S A+ ++ C + KV A LW + L+K +C+ D ++ I
Sbjct: 581 ---------FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDE--TANEIEQC 629
Query: 371 CKEGKIWEA-KKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
KEG+ A ++L + R +L Y + G+C+S EA ++ + EK +
Sbjct: 630 FKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTP 689
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEV 483
+ LI G CK I + LD + L+ L ES + E+
Sbjct: 690 PSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEI 743
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 243/514 (47%), Gaps = 46/514 (8%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PE 109
++++LD A ++F+ N Y +IH L AR D L ++K + P
Sbjct: 265 QRKDLDSAFKVFNEMPL--KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
++ + +I++ + R A+ +E+ ++ ++ + L+++L +++
Sbjct: 323 VR----TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS---------------- 213
+ K ++PNV T N LI CK+ +E A+ V++ M S
Sbjct: 379 ELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 214 ---------MGMV---------PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
MG++ P++VT+ +++ G G+ ++A R+ + DRG VPD
Sbjct: 438 YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TYT ++D K R+ +A + D +E GV PN V Y +I+ +CK K EA +L+
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
ML + +P+S +I LC +GK+++A L +++++ P + + +IH L K+G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 376 IWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
A F + G+ P TY T I C L +A + M E GV P++FTY+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
LI+G+ +G +L+ M D GC P++ +F LI+ L E + G + S
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 495 SVESDSWNFLLTRIVS-DLDSGAGALDELLVKNC 527
+E D+ LL ++V + A + ++L++ C
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 245/559 (43%), Gaps = 96/559 (17%)
Query: 32 TPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA 91
+P +K + P + S+ + AL H+ + +P + H+ +Y S++ L
Sbjct: 78 SPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQ-NPRYKHSVYSYASLLTLLINN 136
Query: 92 RAFDAVESL-LTELKQNPEIKCGENLFI-TVIRNYGLAGRPELAVKTFLRIEKFNVQRSV 149
V + L +K + G+ L++ + R R EL K +
Sbjct: 137 GYVGVVFKIRLLMIKSCDSV--GDALYVLDLCRKMNKDERFELKYKLI-----------I 183
Query: 150 RSLNTLLNALVQNKRYDLVHLMFKNSRHKF--KVVPNVFTCNILIKALCKKDDVEGAIRV 207
NTLLN+L R+ LV M + KV PN++T N ++ CK +VE A +
Sbjct: 184 GCYNTLLNSLA---RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY 240
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG----------------- 250
+ ++ G+ P+ T+T+++ GY R D+++A +VF ++ +G
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 251 ------------------WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
P TYTVL+ R ++A+ ++ EME+ G++PN T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACE------ 346
Y V+I++ C K +AR LL ML++ +P+ +I+ C+ G +EDA +
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 347 ----------------------------LWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ ++L + +PD +++I C+ G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A +L +RG +P TY ++I +C+S + EA L+D + +KGV PNV Y LI
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG--- 494
G+CK G E +LE+ML K C PN +F+ LI GL G E + G
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 495 SVESDSWNFLLTRIVSDLD 513
+V +D+ L+ R++ D D
Sbjct: 601 TVSTDT--ILIHRLLKDGD 617
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 198/449 (44%), Gaps = 57/449 (12%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S+I R+ FD+ LL+ L + + + + ++I + + R E A F
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E+ V +V L++ + + D HLM + K +PN T N LI LC
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADG 581
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + ++M +G+ P + T T ++ + GD ++A F +L G PDA TYT
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
+ Y + GRL DA +M +M +NGV P+ TY +I+ + ++ A ++L M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 320 KYVPSSALCCKVIDLLCE------EGKVEDAC------------ELWKRLLRKNCMPDNA 361
PS +I L E +G + C EL ++++ + P+
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+I +C+ G + A+K+FD +R G PS L +N L++ C+ + EA ++ DD
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD---------------------- 457
M+ G P + + +LI G K G + G + + +L
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Query: 458 -------------KGCFPNKTSFSLLIEG 473
GC + ++SLLIEG
Sbjct: 882 VEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 242/501 (48%), Gaps = 38/501 (7%)
Query: 40 QRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVES 99
++ P +L ++ N+ ++++F + G + H++D Y +I KL F ++
Sbjct: 74 HKITPFQLYKLLELPLNVSTSMELFSWTGS-QNGYRHSFDVYQVLIGKLGANGEFKTIDR 132
Query: 100 LLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEK-FNVQRSVRSLNTLLNA 158
LL ++K + I E+LFI+++R+Y AG P + L + ++ + + +S N +L
Sbjct: 133 LLIQMK-DEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 159 LVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
LV + + +F + + K+ P +FT +++KA C ++++ A+ +L +M G VP
Sbjct: 192 LVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
N V + T++ + A ++ ++ G VPDA T+ ++ G K R+ +A K++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI------ 332
+ M G P+++TYG ++ CK + A++L + + + V + L +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 333 -------DLLCEEGKVEDACE-------LWKRLL------------RKNCMPDNAISSTI 366
D++ G V D C WK L K C P+ + +
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 367 IHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ CK GKI EA + +E G P+ + +N LI+ C+ + EA ++ +M KG
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+P+V+T+N LI G C++ K + +L +M+ +G N +++ LI G E K
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 486 VVSMATASGS-VESDSWNFLL 505
+V+ GS ++ ++N L+
Sbjct: 551 LVNEMVFQGSPLDEITYNSLI 571
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 202/404 (50%), Gaps = 8/404 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y ++IH L++ + LL E+ + E F VI R A K
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET-FNDVILGLCKFDRINEAAKM 309
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ + L+N L + R D +F P + N LI
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFV 364
Query: 197 KKDDVEGAIRVLDEM-PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
++ A VL +M S G+VP++ T+ +++ GY G + A V D+ ++G P+
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
+YT+L+DG+ KLG++ +A V++EM +G++PN V + +I AFCK + EA + +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M ++ P +I LCE +++ A L + ++ + + + +T+I+ + G+
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
I EA+KL +E +GS +TYN+LI G+C + E+ +A L++ M+ G P+ + N+
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
LI G C+ G +E + +EM+ +G P+ +F+ LI GL +G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 192/384 (50%), Gaps = 6/384 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
GR + A F RI K + NTL++ V + R D + + + +VP+V T
Sbjct: 336 GRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI K+ V A+ VL +M + G PN+ ++T ++ G+ G I+ A V ++
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P+ + L+ + K R+ +AV++ EM G +P+ T+ +I C+ +
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A LL DM+ V ++ +I+ G++++A +L ++ + D +++I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 368 HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LC+ G++ +A+ LF++ R G PS ++ N LI G+C S + EA +MV +G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P++ T+N LI G C+ G ++G+ + ++ +G P+ +F+ L+ L + G + +
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 487 VSMATASGSVESD-SWNFLLTRIV 509
+ G V + +W+ LL I+
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSII 715
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 194/384 (50%), Gaps = 13/384 (3%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++++IH D +++L+++ + I + ++I Y G LA++ +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ +V S L++ + + D + + N + PN N LI A CK+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL-NEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
+ A+ + EMP G P++ T +++ G +I++A + D++ G V + TY
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L++ +++ G + +A K+++EM G +E+TY +I+ C+ + +AR+L + ML+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+ PS+ C +I+ LC G VE+A E K ++ + PD +++I+ LC+ G+I +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 381 KLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
+F + + G P +T+NTL++ +C+ + +A L D+ +E G PN T+++L+Q
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Query: 440 CKIGNAKEGIRILEEMLDKGCFPN 463
I +E LD+ F N
Sbjct: 715 -----------IPQETLDRRRFYN 727
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 217/430 (50%), Gaps = 46/430 (10%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMF 172
+ TVI + G + A T+ + + V + N+++ AL + +K ++++ M
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
KN V+P+ T N ++ C + AI L +M S G+ P++VT++ ++
Sbjct: 259 KNG-----VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G A+++F + RG P+ TTY L+ GY G L + ++D M NG+ P+
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
+ ++I A+ K K +A + M Q+ P++ VI +LC+ G+VEDA +++++
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 353 RKNCMPDNAISSTIIHWL-----------------------------------CKEGKIW 377
+ P N + +++IH L CKEG++
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 378 EAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
E++KLF+ R G P+++TYNTLI G C + ++ EA +L MV G++PN TY+ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS- 495
G+CKI ++ + + +EM G P+ +++++++GL+++ ++ T SG+
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 496 VESDSWNFLL 505
+E ++N +L
Sbjct: 614 IELSTYNIIL 623
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 168/352 (47%), Gaps = 4/352 (1%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
AGR +L + K + + LL L +KR + + +PNVF
Sbjct: 100 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVF 159
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMP---SMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
+ NIL+K LC ++ + A+ +L M G P++V++TT++ G+ GD + A +
Sbjct: 160 SYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++LDRG +PD TY ++ K + A++V++ M NGV P+ +TY ++ +C
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+ EA L M P ++D LC+ G+ +A +++ + ++ P+
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 364 STIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
T++ +G + E L D R I P ++ LI + ++ +A ++ M +
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+G+ PN TY +I CK G ++ + E+M+D+G P ++ LI GL
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 238/525 (45%), Gaps = 54/525 (10%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD-AV 97
P + +++ F++ + D A +H + TY+SII L +A+A D A+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEM--LDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 98 ESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLN 157
E L T +K C + +++ Y +G+P+ A+ ++ V+ V + + L++
Sbjct: 252 EVLNTMVKNGVMPDC--MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 158 ALVQNKR---------------------------------------YDLVHLMFKNSRHK 178
L +N R + L+ LM +N H
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH- 368
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
P+ + +ILI A K+ V+ A+ V +M G+ PN VT+ ++G G +E+
Sbjct: 369 ----PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
A F ++D G P Y L+ G + A +++ EM D G+ N + + +I+
Sbjct: 425 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+ CK + E+ L + M++ P+ +I+ C GK+++A +L ++ P
Sbjct: 485 SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP 544
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLW 417
+ ST+I+ CK ++ +A LF E E + P ++TYN ++ G+ ++ A L+
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ E G + + TYN+++ G CK + +++ + + +F+++I+ L +
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 664
Query: 478 GNEGEVGKVVSMATASGSVESDSWNFLLTRIVSDLDSGAGALDEL 522
G E K + +A +S + + W + R++++ G G L+EL
Sbjct: 665 GRNDE-AKDLFVAFSSNGLVPNYWTY---RLMAENIIGQGLLEEL 705
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 40/339 (11%)
Query: 180 KVVPNVFTCNILI-----------------------------------KALCKKDDVEGA 204
+V P++ T ILI K LC A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 205 IR-VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---GWVPDATTYTV 260
+ VL M +G +PN+ ++ +L G + A + + D G PD +YT
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
+++G+ K G A EM D G+ P+ VTY +I A CK + +A +L+ M++
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
+P ++ C G+ ++A K++ PD S ++ +LCK G+ EA+
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 381 KLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
K+FD +RG P + TY TL+ G L E L D MV G+ P+ + +++LI +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
K G + + + +M +G PN ++ +I L +SG
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Query: 252 VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARN 311
PD TY +L+ + GRL + + G + + + +++ C K++ +A +
Sbjct: 84 TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143
Query: 312 L-LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL--RKNCMPDNAIS-STII 367
+ L M + +P+ ++ LC+E + ++A EL + R P + +S +T+I
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 368 HWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ KEG +A + E +RG +P ++TYN++IA +C++ + +A + + MV+ GV
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+ TYN ++ G+C G KE I L++M G P+ ++SLL++ L ++G E K+
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Query: 487 VSMATASG 494
T G
Sbjct: 324 FDSMTKRG 331
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 144/300 (48%), Gaps = 2/300 (0%)
Query: 184 NVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVF 243
N N +I + CK+ V + ++ + M +G+ PN++T+ T++ GY G ++ A ++
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 244 GDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKG 303
++ G P+ TY+ L++GY K+ R+ DA+ + EME +GV P+ +TY ++++ +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 304 KKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAIS 363
+++ A+ L + + + ++ LC+ +DA ++++ L + +
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 364 STIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+ +I L K G+ EAK LF F G +P+ TY + + L E +L+ M +
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
G + N +++ + G L M+D+ F + S + L L G E
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQE 773
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC---MPDNAISS 364
+AR++ D++L+R S + + + + A + R+ R PD
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYG 91
Query: 365 TIIHWLCKEGKI-WEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRL-WDDMVE 422
+I C+ G++ L + ++G + + L+ G+C ++A + M E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK---GCFPNKTSFSLLIEGLYESGN 479
G PNVF+YN+L++G C ++E + +L M D G P+ S++ +I G ++ G+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 106/252 (42%), Gaps = 12/252 (4%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCG 113
+D A+++ +G N TY ++I+ + + L E++ + P+I
Sbjct: 527 MDEAMKLL--SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT- 583
Query: 114 ENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+ +++ R A + ++RI + Q + + N +L+ L +NK D MF+
Sbjct: 584 ---YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Query: 174 N-SRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
N K+ F NI+I AL K + A + S G+VPN T+ + +
Sbjct: 641 NLCLMDLKLEARTF--NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
+G +E ++F + D G D+ ++ ++ G +T A + +++ T
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758
Query: 293 YGVMIEAFCKGK 304
+ I+ GK
Sbjct: 759 ASLFIDLLSGGK 770
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 222/499 (44%), Gaps = 54/499 (10%)
Query: 41 RLYPKRLVSMIFRQQN-LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVE 98
RL P +V +++R +N L L + G PNF H + ++IH L R+ R DA
Sbjct: 75 RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQS 134
Query: 99 SLLTELKQNP----EI---------KCGEN--LFITVIRNYGLA---------------- 127
LL ++++ EI CG N +F +IR Y A
Sbjct: 135 CLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK 194
Query: 128 -------------------GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLV 168
G ELA + I + V +V +LN ++NAL ++ + + V
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 169 HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILG 228
+ K V P++ T N LI A K +E A +++ MP G P + T+ T++
Sbjct: 255 GTFLSQVQEK-GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G G E AK VF ++L G PD+TTY L+ K G + + KV +M V P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ V + M+ F + +A + + + +P + + +I C +G + A L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+L++ C D +TI+H LCK + EA KLF+E ER P T LI G C+
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L A L+ M EK + +V TYN L+ GF K+G+ I +M+ K P S+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 468 SLLIEGLYESGNEGEVGKV 486
S+L+ L G+ E +V
Sbjct: 554 SILVNALCSKGHLAEAFRV 572
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 216/419 (51%), Gaps = 11/419 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRP 130
FS TY+++I+ L + ++ + + E+ ++ P+ +L + + G
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK----GDV 356
Query: 131 ELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNI 190
K F + +V + +++++ ++ D LM+ NS + ++P+ I
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA-LMYFNSVKEAGLIPDNVIYTI 415
Query: 191 LIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRG 250
LI+ C+K + A+ + +EM G ++VT+ TIL G R + A ++F ++ +R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
PD+ T T+L+DG+ KLG L +A+++ +M++ + + VTY +++ F K A+
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+ DM+ ++ +P+ +++ LC +G + +A +W ++ KN P I +++I
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 371 CKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK--GVEP 427
C+ G + + ++ G +P ++YNTLI G +++A L M E+ G+ P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
+VFTYN ++ GFC+ KE +L +M+++G P++++++ +I G N E ++
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 140/283 (49%), Gaps = 4/283 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY++I+H L + + + L E+ + L I +I + G + A++ F +
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI-LIDGHCKLGNLQNAMELFQK 505
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+++ ++ V + NTLL+ + D ++ + K +++P + +IL+ ALC K
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKG 564
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A RV DEM S + P ++ +++ GY G+ + + ++ G+VPD +Y
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 260 VLMDGYIKLGRLTDAVKVMDEMED--NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ G+++ ++ A ++ +ME+ G+ P+ TY ++ FC+ + EA +L M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+R P + +I+ + + +A + +L++ PD+
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N+ + ++I + + +K EA + + + S C +I L G VE A ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
+ + R + + +++ LCK+GK+ + + E+G P ++TYNTLI+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
+ EA L + M KG P V+TYN +I G CK G + + EML G P+ T++
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 468 SLLIEGLYESGNEGEVGKVVS 488
L+ + G+ E KV S
Sbjct: 344 RSLLMEACKKGDVVETEKVFS 364
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 331 VIDLL----CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
V DLL + K+ +A E + L K + +I L + G + A ++ E
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 387 ERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
R + ++ T N ++ +C+ ++ + G + EKGV P++ TYN LI + G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SVESDSWNFL 504
+E ++ M KG P +++ +I GL + G +V + SG S +S ++ L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 505 L 505
L
Sbjct: 347 L 347
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 199/399 (49%), Gaps = 10/399 (2%)
Query: 60 ALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
ALQ FH+ H + H+ ++ I AR V SL+ ++ + I F
Sbjct: 73 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR-SLRIGPSPKTFAI 131
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
V Y AG+P+ AVK FL + + + + S NT+L+ L ++KR + + +F+ R +F
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V + T N+++ C A+ VL EM G+ PNL T+ T+L G+ G I +A
Sbjct: 192 SV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
F ++ R D TYT ++ G+ G + A V DEM GV P+ TY MI+
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CK A + ++M++R Y P+ +I L G+ EL +R+ + C P+
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGS-IPSLLTYNTLIAGMC---ESAELTEAGR 415
+ +I + + ++ +A LF++ G +P+L TYN LI+GM S ++ AG+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGK 429
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGN---AKEGIRI 451
L +MVE+G P FT+N ++ G GN AKE +R+
Sbjct: 430 LLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRL 468
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 7/312 (2%)
Query: 165 YDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
+ L+H M ++ P+ T I+ + + A+++ M G +L +
Sbjct: 111 WSLIHRM-----RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFN 165
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDN 284
TIL +E A +F + R V D TY V+++G+ + R A++V+ EM +
Sbjct: 166 TILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 285 GVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDA 344
G+ PN TY M++ F + + A +M +R V+ G+++ A
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 345 CELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAG 403
++ ++R+ +P A + +I LCK+ + A +F+E RG P++ TYN LI G
Sbjct: 285 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Query: 404 MCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPN 463
+ + E + L M +G EPN TYNM+I+ + + ++ + + E+M C PN
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Query: 464 KTSFSLLIEGLY 475
++++LI G++
Sbjct: 405 LDTYNILISGMF 416
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 153/302 (50%), Gaps = 3/302 (0%)
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
++ M S+ + P+ T + Y G + A ++F ++ + G D ++ ++D
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K R+ A ++ + + VTY V++ +C K++ +A +L +M++R P+
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
++ G++ A E + + +++C D +T++H G+I A+ +FDE
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 387 ER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
R G +PS+ TYN +I +C+ + A ++++MV +G EPNV TYN+LI+G G
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYE-SGNEGEVGKVVSMATASGSVESDSWNFL 504
G +++ M ++GC PN +++++I E S E +G M + D++N L
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 505 LT 506
++
Sbjct: 412 IS 413
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 3/176 (1%)
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L+ M + PS V + GK + A +L+ + C D A +TI+ L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 371 CKEGKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVF 430
CK ++ +A +LF +TYN ++ G C +A + +MVE+G+ PN+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 431 TYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
TYN +++GF + G + EM + C + +++ ++ G G GE+ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF---GVAGEIKRA 284
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 224/447 (50%), Gaps = 10/447 (2%)
Query: 57 LDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELKQNPEIKCGEN 115
+D AL I H A F +Y++++ R+ R E++ E+ E + N
Sbjct: 150 IDKALSIVHLAQAH--GFMPGVLSYNAVLDATIRSKRNISFAENVFKEM---LESQVSPN 204
Query: 116 LFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFK 173
+F +IR + AG ++A+ F ++E +V + NTL++ + ++ D + +
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 264
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+ K + PN+ + N++I LC++ ++ VL EM G + VT+ T++ GY
Sbjct: 265 SMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
G+ A + ++L G P TYT L+ K G + A++ +D+M G+ PNE TY
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+++ F + EA +L +M + PS +I+ C GK+EDA + + +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
K PD ST++ C+ + EA ++ E E+G P +TY++LI G CE E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A L+++M+ G+ P+ FTY LI +C G+ ++ +++ EM++KG P+ ++S+LI
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 473 GLYESGNEGEVGKVVSMATASGSVESD 499
GL + E +++ SV SD
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSD 590
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 196/364 (53%), Gaps = 3/364 (0%)
Query: 115 NLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFK 173
++F V+++Y + A+ + V S N +L+A +++KR +FK
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 174 NSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR 233
+V PNVFT NILI+ C +++ A+ + D+M + G +PN+VT+ T++ GY
Sbjct: 195 EMLES-QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 234 GDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTY 293
I++ ++ + +G P+ +Y V+++G + GR+ + V+ EM G +EVTY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 294 GVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR 353
+I+ +CK +A + +ML+ PS +I +C+ G + A E ++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 354 KNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTE 412
+ P+ +T++ ++G + EA ++ E + G PS++TYN LI G C + ++ +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 413 AGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIE 472
A + +DM EKG+ P+V +Y+ ++ GFC+ + E +R+ EM++KG P+ ++S LI+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 473 GLYE 476
G E
Sbjct: 494 GFCE 497
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 215/427 (50%), Gaps = 18/427 (4%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+ +I+ L R V +LTE+ + E + T+I+ Y G A+
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + + SV + +L++++ + + R + + PN T L+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFS 391
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
+K + A RVL EM G P++VT+ ++ G+ G +E+A V D+ ++G PD
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y+ ++ G+ + + +A++V EM + G++P+ +TY +I+ FC+ +++ EA +L ++M
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
L+ P +I+ C EG +E A +L ++ K +PD S +I+ L K+ +
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 377 WEAKKLFDE-FERGSIPSLLTYNTLI---------------AGMCESAELTEAGRLWDDM 420
EAK+L + F S+PS +TY+TLI G C +TEA ++++ M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ K +P+ YN++I G C+ G+ ++ + +EM+ G + + L++ L++ G
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 481 GEVGKVV 487
E+ V+
Sbjct: 692 NELNSVI 698
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+ +F E + P++ TYN LI G C + + A L+D M KG PNV TYN LI
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG-SV 496
G+CK+ +G ++L M KG PN S++++I GL G EV V++ G S+
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 497 ESDSWNFLL 505
+ ++N L+
Sbjct: 309 DEVTYNTLI 317
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 147/329 (44%), Gaps = 39/329 (11%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---NPEIKCGENLFITVIRNYGLAGRP 130
FS + TY+++I+ + ++L ++K+ +P++ + R+Y
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD----- 465
Query: 131 ELAVKTFLRIEKFNVQRSVR----SLNTLLNALVQNKRY----DLVHLMFKNSRHKFKVV 182
V LR+++ V++ ++ + ++L+ + +R DL M + +
Sbjct: 466 ---VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-----VGLP 517
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ FT LI A C + D+E A+++ +EM G++P++VT++ ++ G + AKR+
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 243 FGDILDRGWVPDATTYTVLMD---------------GYIKLGRLTDAVKVMDEMEDNGVE 287
+ VP TY L++ G+ G +T+A +V + M +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347
P+ Y +MI C+ +A L +M++ ++ + ++ L +EGKV + +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 348 WKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+LR + + + ++ +EG +
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNM 726
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTIL------------- 227
V+P+V T ++LI L K+ A R+L ++ VP+ VT+ T++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 228 --GGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285
G+ +G + A +VF +L + PD T Y +++ G+ + G + A + EM +G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 286 VEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDAC 345
+ VT +++A K K E +++ +L+ + + ++++ EG ++
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 346 ELWKRLLRKNCMPDNAIS 363
++ + + +P N IS
Sbjct: 731 DVLAEMAKDGFLP-NGIS 747
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 209/406 (51%), Gaps = 9/406 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
KPW + + L + ++ + AL +FH + F H+Y +Y S+I+KLA++R FD
Sbjct: 45 KPWEEVPFLTDLKEI----EDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFD 98
Query: 96 AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTL 155
AV+ +L L + ++C E+LF+ +I++YG AG + A+ F +I F+ R+++SLNTL
Sbjct: 99 AVDQIL-RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTL 157
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
+N LV N + F ++ ++ PN + NILIK K D E A +V DEM M
Sbjct: 158 INVLVDNGELEKAKSFFDGAK-DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ P++VT+ +++G D+ AK + D++ + P+A T+ +LM G G +A
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
K+M +ME G +P V YG+++ K + EA+ LL +M +R+ P + +++ L
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSL 394
C E +V +A + + K C P+ A +I C+ + + P+
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFC 440
T+ ++AG+ + L A + + M +K + + L+ C
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 200/398 (50%), Gaps = 6/398 (1%)
Query: 130 PELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNVFTC 188
PE A+ F + ++ + S ++L+ L +++ +D V + + R++ + ++F
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
LI+ K V+ AI V ++ S V + + T++ V G++E AK F D
Sbjct: 122 --LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
P++ ++ +L+ G++ A KV DEM + V+P+ VTY +I C+ G+
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A++LL+DM++++ P++ ++ LC +G+ +A +L + + C P ++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G+I EAK L E ++ I P ++ YN L+ +C + EA R+ +M KG +P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
N TY M+I GFC+I + G+ +L ML P +F ++ GL + GN V+
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Query: 488 S-MATASGSVESDSWNFLLTRI-VSDLDSGAGALDELL 523
M + S S +W LL+ + + D AL E++
Sbjct: 420 EVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVI 457
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 196/372 (52%), Gaps = 4/372 (1%)
Query: 104 LKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
++ PE+ N+ + VI GR + A L +E V S +T++N +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
D V + + + K + PN + +I LC+ + A EM G++P+ V
Sbjct: 294 FGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
+TT++ G+ RGDI A + F ++ R PD TYT ++ G+ ++G + +A K+ EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
G+EP+ VT+ +I +CK +A + + M+Q P+ +ID LC+EG +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTL 400
+ A EL + + P+ ++I++ LCK G I EA KL EFE + + +TY TL
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
+ C+S E+ +A + +M+ KG++P + T+N+L+ GFC G ++G ++L ML KG
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 461 FPNKTSFSLLIE 472
PN T+F+ L++
Sbjct: 593 APNATTFNSLVK 604
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 217/468 (46%), Gaps = 32/468 (6%)
Query: 35 IKPWPQRLYPKRLVSMIFRQQ-NLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARA 93
+KP+ + L+ ++ + + + L L F +A N ++ +IH ++
Sbjct: 78 LKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA---RSRRDSNLESLCIVIHLAVASKD 134
Query: 94 FDAVESLLTELKQNPEIKCGENL---FITVIRNYGLAGRPELAVKTFLRI-EKFNVQRSV 149
+SL++ + P++ ++ F ++ Y G F ++ F + R
Sbjct: 135 LKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 194
Query: 150 RSL-NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK-DDVEGAIRV 207
R + +LN + +V +V +CN+ + L K AI V
Sbjct: 195 RRVFEKMLN---------------------YGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
E P +G+ N+ ++ ++ G I+ A + + +G+ PD +Y+ +++GY +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G L K+++ M+ G++PN YG +I C+ K EA +M+++ +P + +
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE-F 386
+ID C+ G + A + + + ++ PD + II C+ G + EA KLF E F
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P +T+ LI G C++ + +A R+ + M++ G PNV TY LI G CK G+
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+L EM G PN +++ ++ GL +SGN E K+V A+G
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 169/325 (52%), Gaps = 9/325 (2%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++P+ LI CK+ D+ A + EM S + P+++T+T I+ G+ GD+ A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F ++ +G PD+ T+T L++GY K G + DA +V + M G PN VTY +I+
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
CK A LL +M + P+ +++ LC+ G +E+A +L D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T++ CK G++ +A+++ E +G P+++T+N L+ G C L + +L +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ KG+ PN T+N L++ +C N K I ++M +G P+ ++ L++G ++ N
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 480 EGEV--------GKVVSMATASGSV 496
E GK S++ ++ SV
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSV 671
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 11/405 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N Y SII L R E +E+ + I ++ T+I + G A K
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQ----NKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
F + ++ V + +++ Q + L H MF + P+ T LI
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-----LEPDSVTFTELI 428
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
CK ++ A RV + M G PN+VT+TT++ G GD+++A + ++ G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TY +++G K G + +AVK++ E E G+ + VTY +++A+CK + +A+ +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L +ML + P+ +++ C G +ED +L +L K P+ ++++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 373 EGKIWEAKKLF-DEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
+ A ++ D RG P TY L+ G C++ + EA L+ +M KG +V T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
Y++LI+GF K E + ++M +G +K F + Y+
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 134/290 (46%), Gaps = 16/290 (5%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ + ++ +LD A ++ H K N TY+SI++ L ++ +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKI--GLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
L+ E + + + T++ Y +G + A + + +Q ++ + N L+N
Sbjct: 512 KLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 159 LVQNKRYDLVHLMFKNSRHKFK------VVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
+H M ++ + PN T N L+K C +++++ A + +M
Sbjct: 571 FC-------LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
S G+ P+ T+ ++ G+ +++ A +F ++ +G+ +TY+VL+ G++K +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
+A +V D+M G+ ++ + + KGK+ + +D++++ V
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 187/351 (53%), Gaps = 2/351 (0%)
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
R E A F + S+ LL A +RY+ V + F + + ++++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISHDLYSF 109
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
ILI C+ + A+ VL +M +G P++VT ++L G+ I +A + ++
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 249 RGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGE 308
G+ P+ Y L+DG K G L A+++++EME G+ + VTY ++ C + +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 309 ARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
A +L DM++R P +ID+ ++G +++A EL+K +++ + P+N ++II+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 369 WLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
LC G++++AKK FD +G P+++TYNTLI+G C+ + E +L+ M +G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++FTYN LI G+C++G + + I M+ + P+ + +L+ GL +G
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 186/385 (48%), Gaps = 10/385 (2%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMF 172
F +I + R A+ ++ K + S+ + +LL+ R + LV LM
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVW 232
K+ PNV N LI LCK ++ A+ +L+EM G+ ++VT+ T+L G +
Sbjct: 169 KSGYE-----PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 233 RGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
G +A R+ D++ R PD T+T L+D ++K G L +A ++ EM + V+PN VT
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 293 YGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL 352
Y +I C + +A+ D M + P+ +I C+ V++ +L++R+
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 353 RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELT 411
+ D +T+IH C+ GK+ A +F R P ++T+ L+ G+C + E+
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
A +DDM E + YN++I G CK ++ + + +G P+ +++++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 472 EGLYESGNEGEVGKVVSMATASGSV 496
GL ++G E +++ G +
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 133/267 (49%), Gaps = 1/267 (0%)
Query: 229 GYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
G++ E+A +F +++ +P +T L+ L R + +ME G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
+ ++ ++I FC+ + A ++L M++ Y PS ++ C ++ DA L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS-LLTYNTLIAGMCES 407
+++ P+ + +T+I LCK G++ A +L +E E+ + + ++TYNTL+ G+C S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 408 AELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
++A R+ DM+++ + P+V T+ LI F K GN E + +EM+ PN ++
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 468 SLLIEGLYESGNEGEVGKVVSMATASG 494
+ +I GL G + K + + G
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKG 311
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 166/383 (43%), Gaps = 11/383 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESLLTELK 105
L+ R L AL + K + + T+ S++H R DA ++ +K
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKL--GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 106 QN--PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNK 163
P + L + +N G +A++ +EK + V + NTLL L +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKN----GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 164 RYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
R+ M ++ + + P+V T LI K+ +++ A + EM + PN VT+
Sbjct: 226 RWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
+I+ G G + +AK+ F + +G P+ TY L+ G+ K + + +K+ M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
G + TY +I +C+ K A ++ M+ R+ P C ++ LC G++E
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIA 402
A + + + +IH LCK K+ +A +LF G P TY +I
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 403 GMCESAELTEAGRLWDDMVEKGV 425
G+C++ EA L M E+G+
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI 487
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 220/435 (50%), Gaps = 7/435 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL--FITVIRNYGLAGRPELAVKTF 137
T+ ++IH L +L+ ++ Q C +L + TV+ G +LA+
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++EK ++ V NT+++ L + K D +F +K + P+VFT + LI LC
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCN 305
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
A R+L +M + PN+VT + ++ +V G + A++++ +++ R PD T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ L++G+ RL +A + + M PN VTY +I+ FCK K+ E L +M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
QR V ++ +I + ++A ++K+++ P+ + ++ LCK GK+
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A +F+ +R ++ P + TYN +I GMC++ ++ + L+ ++ KGV PNV YN +I
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
GFC+ G+ +E +L++M + G PN +++ LI G+ +++ + G
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Query: 497 ESDSWNFLLTRIVSD 511
S L+T ++ D
Sbjct: 606 GDASTIGLVTNMLHD 620
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 184/381 (48%), Gaps = 37/381 (9%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
AV F + K S+ N LL+A+ + +++LV + + +++T +I I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFI 125
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
C++ + A+ VL +M +G P++VT +++L GY I +A + +++ G+
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV----------------- 295
PD T+T L+ G + ++AV ++D+M G +P+ VTYG
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 296 ------------------MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
+I+ CK K +A NL +M + P +I LC
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLT 396
G+ DA L ++ + P+ S +I KEGK+ EA+KL+DE + SI P + T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 397 YNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
Y++LI G C L EA +++ M+ K PNV TY+ LI+GFCK +EG+ + EM
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 457 DKGCFPNKTSFSLLIEGLYES 477
+G N +++ LI G +++
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQA 446
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 161/367 (43%), Gaps = 48/367 (13%)
Query: 80 TYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY S+I L + LL+++ K NP + F +I + G+ A K
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT----FSALIDAFVKEGKLVEAEKL 350
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ + K ++ + + ++L+N + R D MF+ K PNV T + LIK C
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYSTLIKGFC 409
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K VE + + EM G+V N VT+TT++ G+ D +NA+ VF ++ G P+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
TY +L+DG K G+L A+ V + ++ + +EP+ TY +MIE CK
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA------------- 516
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
GKVED EL+ L K P+ +T+I C++G
Sbjct: 517 ----------------------GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 377 WEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY--- 432
EA L + E G +P+ TYNTLI + + L +M G + T
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 433 -NMLIQG 438
NML G
Sbjct: 615 TNMLHDG 621
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FGD++ P + L+ K+ + + + ++M+ G+ + TY +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
I FC+ K+ +A L+D M++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P + +I L K +A L +++++ C PD T+++ LCK G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 381 KLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + E+G I + ++ YNT+I G+C+ + +A L+ +M KG+ P+VFTY+ LI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ PN +FS LI+ + G E K+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
K +A +L DM++ + PS K++ + + K E L +++ D S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
I+ C+ ++ A + + + G P ++T ++L+ G C S +++A L D MVE
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
G +P+ FT+ LI G A E + ++++M+ +GC P+ ++ ++ GL + G+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVK 135
N TY ++I +A+ + L E+ Q + G + + T+I + A + A
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYTTLIHGFFQARDCDNAQM 454
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F ++ V ++ + N LL+ L +N + ++F+ + + P+++T NI+I+ +
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE-YLQRSTMEPDIYTYNIMIEGM 513
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK VE + + G+ PN++ + T++ G+ +G E A + + + G +P++
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
TY L+ ++ G + +++ EM G + T G++ G+
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
KV+DA +L+ +++ P + ++ + K K L ++ + I L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
I C ++L+ A + M++ G EP++ T + L+ G+C + + ++++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P+ +F+ LI GL+ E +V G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 186/347 (53%), Gaps = 2/347 (0%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A+ F R+ S+ LL+ + + RYD+V +F+ + + P + TCNI++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ-ILGIPPLLCTCNIVM 125
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+C A L +M +G P+LVT T++L GY IE+A +F IL G+
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+ TYT L+ K L AV++ ++M NG PN VTY ++ C+ + G+A L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
L DM++R+ P+ +ID + GK+ +A EL+ +++ + PD ++I+ LC
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 373 EGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + EA+++F ER G P+ + Y TLI G C+S + + +++ +M +KGV N T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
Y +LIQG+C +G + +M + P+ ++++L++GL +G
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 203/435 (46%), Gaps = 9/435 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAG--KFHPNFSHNYDTYHSIIHKLARARA 93
+P P + RL+S+I + D+ + +F P H + RA
Sbjct: 78 RPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA 137
Query: 94 FDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLN 153
+ +L P++ F +++ Y R E A+ F +I + +V +
Sbjct: 138 -SCFLGKMMKLGFEPDLV----TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
TL+ L +N+ + +F N PNV T N L+ LC+ A +L +M
Sbjct: 193 TLIRCLCKNRHLNHAVELF-NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+ PN++T T ++ +V G + AK ++ ++ PD TY L++G G L +
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A ++ ME NG PNEV Y +I FCK K+ + + +M Q+ V ++ +I
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP- 392
C G+ + A E++ ++ + PD + ++ LC GK+ +A +F+ + +
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+++TY +I GMC+ ++ +A L+ + KG++PNV TY +I GFC+ G E +
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 453 EEMLDKGCFPNKTSF 467
++M + G PN++ +
Sbjct: 492 KKMKEDGFLPNESVY 506
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 1/261 (0%)
Query: 235 DIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYG 294
+A +F ++ +P +T L+ K+ R + + ++M+ G+ P T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 295 VMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK 354
+++ C + A L M++ + P +++ C ++EDA L+ ++L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 355 NCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEA 413
P+ +T+I LCK + A +LF++ GS P+++TYN L+ G+CE +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 414 GRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
L DM+++ +EPNV T+ LI F K+G E + M+ +P+ ++ LI G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 474 LYESGNEGEVGKVVSMATASG 494
L G E ++ + +G
Sbjct: 303 LCMYGLLDEARQMFYLMERNG 323
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 2/254 (0%)
Query: 251 WVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEAR 310
W+ ++Y ++ + + DA+ + M + P+ + + ++ K +
Sbjct: 44 WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVI 103
Query: 311 NLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWL 370
+L + M P C V+ +C + A ++++ PD +++++
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 371 CKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNV 429
C +I +A LFD+ G P+++TY TLI +C++ L A L++ M G PNV
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN L+ G C+IG + +L +M+ + PN +F+ LI+ + G E ++ ++
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 490 ATASGSVESDSWNF 503
SV D + +
Sbjct: 284 MIQM-SVYPDVFTY 296
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 183/363 (50%), Gaps = 37/363 (10%)
Query: 152 LNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEM 211
N L +A+ + K+YDLV L F + +++T I+I C+K + A VL
Sbjct: 73 FNRLCSAVARTKQYDLV-LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRA 131
Query: 212 PSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRL 271
+G P+ +T +T++ G+ G + A + +++ PD T + L++G GR+
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 272 TDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKV 331
++A+ ++D M + G +P+EVTYG ++ CK S A +L M +R S V
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 332 IDLLCEEGKVEDACELW-----------------------------------KRLLRKNC 356
ID LC++G +DA L+ + ++ +N
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
+PD S +I KEGK+ EAK+L++E RG P +TYN+LI G C+ L EA +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 416 LWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLY 475
++D MV KG EP++ TY++LI +CK +G+R+ E+ KG PN +++ L+ G
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 476 ESG 478
+SG
Sbjct: 432 QSG 434
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 230/458 (50%), Gaps = 12/458 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA-RARAFDAVESL--LTELKQNPE 109
R++ L A + A K + + T+ ++++ R +AV + + E+KQ P+
Sbjct: 117 RKKKLLFAFSVLGRAWKL--GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
+ T+I L GR A+ R+ ++ Q + +LN L ++ L
Sbjct: 175 LVTVS----TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+F+ + + +V +I+I +LCK + A+ + +EM G+ ++VT+++++GG
Sbjct: 231 DLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G ++ ++ +++ R +PD T++ L+D ++K G+L +A ++ +EM G+ P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+TY +I+ FCK EA + D M+ + P +I+ C+ +V+D L++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+ K +P+ +T++ C+ GK+ AK+LF E RG PS++TY L+ G+C++
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
EL +A +++ M + + + YN++I G C + + + DKG P+ +++
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESD-SWNFLL 505
++I GL + G+ E + G D ++N L+
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 205/404 (50%), Gaps = 3/404 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + TY ++++L ++ L ++++ IK + VI + G + A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F +E ++ V + ++L+ L + ++D M + + ++P+V T + LI
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALID 323
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
K+ + A + +EM + G+ P+ +T+ +++ G+ + A ++F ++ +G P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY++L++ Y K R+ D +++ E+ G+ PN +TY ++ FC+ K A+ L
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M+ R PS ++D LC+ G++ A E+++++ + I + IIH +C
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 374 GKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
K+ +A LF ++G P ++TYN +I G+C+ L+EA L+ M E G P+ FTY
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
N+LI+ + ++EEM G + ++ ++I+ L +
Sbjct: 564 NILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 38/353 (10%)
Query: 155 LLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSM 214
L N +V K D + L S + + +P N L A+ + + + M
Sbjct: 42 LRNGIVDIKVNDAIDLF--ESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+ ++ T T ++ Y + + A V G G+ PD T++ L++G+ GR+++A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 275 VKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDL 334
V ++D M + P+ VT +I C + EA L+D M++ + P V++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 335 LCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPS 393
LC+ G A +L++++ +N S +I LCK+G +A LF+E E +G
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 394 LLTYNTLIAGMC-----------------------------------ESAELTEAGRLWD 418
++TY++LI G+C + +L EA L++
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+M+ +G+ P+ TYN LI GFCK E ++ + M+ KGC P+ ++S+LI
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 223/446 (50%), Gaps = 9/446 (2%)
Query: 70 FHPNFSHNYDTYHSIIHKL-ARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGL 126
F + N T++++IH L +A +AV + + + C +LF TV+
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG----CQPDLFTYGTVVNGLCK 232
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
G +LA+ ++EK ++ V T+++AL K + +F +K + PNV
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVV 291
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N LI+ LC A R+L +M + PN+VT + ++ +V G + A++++ ++
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ R PD TY+ L++G+ RL +A + + M PN VTY +I+ FCK K+
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
E L +M QR V ++ +I L + G + A +++K+++ PD S +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LCK GK+ +A +F+ ++ + P + TYN +I GMC++ ++ + L+ + KGV
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+PNV Y +I GFC+ G +E + EM + G PN +++ LI G++ +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 486 VVSMATASGSVESDSWNFLLTRIVSD 511
++ + G V S ++ ++ D
Sbjct: 592 LIKEMRSCGFVGDASTISMVINMLHD 617
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 2/357 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
R++ + + S N L+N + + L L K P++ T + L+ C
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLA-LAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
+ A+ ++D+M M PN VT T++ G A + ++ RG PD TY
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+++G K G + A+ ++ +ME +E + V Y +I+A C K +A NL +M
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P+ +I LC G+ DA L ++ + P+ S +I KEGK+ E
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A+KL+DE + SI P + TY++LI G C L EA +++ M+ K PNV TYN LI+
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
GFCK +EG+ + EM +G N +++ LI+GL+++G+ K+ + G
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 232/450 (51%), Gaps = 17/450 (3%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYD--TYHSIIHKLARARA 93
+P P + +L+S I + DL + + G+ N +YD +Y+ +I+ R
Sbjct: 75 RPLPSIVEFNKLLSAIAKMNKFDLVISL----GERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 94 FD---AVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
AV + +L P+I +L + Y R AV ++ Q +
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 151 SLNTLLNAL-VQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
+ NTL++ L + NK + V L+ + + P++FT ++ LCK+ D++ A+ +L
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
+M + ++V +TTI+ ++ +A +F ++ ++G P+ TY L+ G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
R +DA +++ +M + + PN VT+ +I+AF K K EA L D+M++R P
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ER 388
+I+ C ++++A +++ ++ K+C P+ +T+I CK ++ E +LF E +R
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G + + +TYNTLI G+ ++ + A +++ MV GV P++ TY++L+ G CK G ++
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ + E + P+ +++++IEG+ ++G
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 36/287 (12%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FG+++ +P + L+ K+ + + + + M++ + + +Y +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 296 MIEAFCK-----------------------------------GKKSGEARNLLDDMLQRK 320
+I FC+ GK+ EA L+D M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
Y P++ +I L K +A L R++ + C PD T+++ LCK G I A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 381 KLFDEFERGSIPS-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGF 439
L + E+G I + ++ Y T+I +C + +A L+ +M KG+ PNV TYN LI+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
C G + R+L +M+++ PN +FS LI+ + G E K+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVK 135
N TY+++I +A+ + L E+ Q + G + + T+I+ AG ++A K
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 136 TFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
F ++ V + + + LL+ L + + + ++F+ K K+ P+++T NI+I+ +
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPDIYTYNIMIEGM 510
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
CK VE + + G+ PN++ +TT++ G+ +G E A +F ++ + G +P++
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
TY L+ ++ G + +++ EM G + T ++I G+
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
K +A +L +M+Q + +PS K++ + + K + L +R+ D +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 365 TIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK 423
+I+ C+ ++ A + + + G P ++T ++L+ G C ++EA L D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 424 GVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+PN T+N LI G A E + +++ M+ +GC P+ ++ ++ GL + G+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 220/435 (50%), Gaps = 14/435 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY +I L + R DA + L+ E+ + I ++ I G E A F
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHG-INIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+ + ++ +L+ + K Y+L+ M K + +V + +T ++K +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN-----IVISPYTYGTVVKGM 427
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C D++GA ++ EM + G PN+V +TT++ ++ +A RV ++ ++G PD
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
Y L+ G K R+ +A + EM +NG++PN TYG I + + + A + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M + +P+ LC +I+ C++GKV +AC ++ ++ + + D + +++ L K K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 376 IWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+ +A+++F E +G P + +Y LI G + + +A ++D+MVE+G+ PNV YNM
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ GFC+ G ++ +L+EM KG PN ++ +I+G +SG+ E ++ G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 495 SVESDSWNFLLTRIV 509
V +F+ T +V
Sbjct: 728 LVPD---SFVYTTLV 739
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 205/430 (47%), Gaps = 13/430 (3%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELA 133
N Y ++I + F +L E+K+ P+I C +L I + + A R + A
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK----AKRMDEA 506
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ + + ++ + + ++ ++ + K R + V+PN C LI
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLIN 565
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CKK V A M G++ + T+T ++ G +++A+ +F ++ +G P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D +Y VL++G+ KLG + A + DEM + G+ PN + Y +++ FC+ + +A+ LL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
D+M + P++ C +ID C+ G + +A L+ + K +PD+ + +T++ C+
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 374 GKIWEAKKLFDEFERGSIPSLLTYNTLIAGMCE--SAEL-TEA-GRLWDDMVEKGVEPNV 429
+ A +F ++G S +N LI + + EL TE RL D ++ +PN
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 430 FTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSM 489
TYN++I CK GN + + +M + P +++ L+ G + G E+ V
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 490 ATASGSVESD 499
A A+G +E D
Sbjct: 866 AIAAG-IEPD 874
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 199/423 (47%), Gaps = 10/423 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y+S+I L++A+ D S L E+ +N +K + I Y A A K +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ V + L+N + + +++ + ++ + T +L+ L K D
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDK 607
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A + EM G+ P++ ++ ++ G+ G+++ A +F ++++ G P+ Y +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 261 LMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
L+ G+ + G + A +++DEM G+ PN VTY +I+ +CK EA L D+M +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 321 YVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAK 380
VP S + ++D C VE A ++ +K C A + +I+W+ K GK E K
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKT-ELK 785
Query: 381 -----KLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+L D F+R P+ +TYN +I +C+ L A L+ M + P V TY
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
L+ G+ K+G E + +E + G P+ +S++I + G + +V A
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 495 SVE 497
+V+
Sbjct: 906 AVD 908
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 56/444 (12%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCG----ENLFITVIRNYGLAGRPEL 132
N TY + I A F + + + E+++ CG + L +I Y G+
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRE-----CGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A + + + ++ L+N L +N + D +F+ R K + P+VF+ +LI
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLI 634
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
K +++ A + DEM G+ PN++ + +LGG+ G+IE AK + ++ +G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P+A TY ++DGY K G L +A ++ DEM+ G+ P+ Y +++ C+ A +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC----MPDNAISSTIIH 368
++ S+A +I+ + + GK E E+ RL+ + P++ + +I
Sbjct: 755 FGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 369 WLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
+LCKEG + AK+LF + + ++ P+++TY +L+ G + E ++D+ + G+EP
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 428 NVFTYNMLI----------------------------------------QGFCKIGNAKE 447
+ Y+++I GF K+G +
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 448 GIRILEEMLDKGCFPNKTSFSLLI 471
+++E M+ P+ + LI
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELI 957
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF + Y G E AV F + + LL+AL++ R DL ++K
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 176 RHKFKVVPNVFTCNILIKALCK-------KD--------------DVEGAIRVLDEMPSM 214
+ VV +V T ++LI A C+ KD +V+GA+++ + M
Sbjct: 213 VER-NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 215 GMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDA 274
G+VP T+ ++ G +E+AK + ++ G D TY++L+DG +K GR DA
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADA 330
Query: 275 VK------------------------------------VMDEMEDNGVEPNEVTYGVMIE 298
K + D M +G+ P Y +IE
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+C+ K + LL +M +R V S V+ +C G ++ A + K ++ C P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
+ I +T+I + + +A ++ E E+G P + YN+LI G+ ++ + EA
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
+MVE G++PN FTY I G+ + + ++EM + G PNK + LI
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
PN T NI+I LCK+ ++E A + +M + ++P ++T+T++L GY G V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM-----EDNGVEPNEVTYGVMI 297
F + + G PD Y+V+++ ++K G T A+ ++D+M D+G + + T ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 298 EAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
F K + A ++++M++ +Y+P SA ++I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277
PN VT+ ++ G++E AK +F + + +P TYT L++GY K+GR + V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVP-----SSALCCKVI 332
DE G+EP+ + Y V+I AF K + +A L+D M + V S + C ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC 371
+ G++E A ++ + ++R +PD+A +I+ C
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 188/359 (52%), Gaps = 2/359 (0%)
Query: 116 LFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNS 175
LF T I + G+ E AVK F ++E+ V +V + NT+++ L RYD MFK
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA-FMFKEK 333
Query: 176 RHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGD 235
+ + P + T +IL+K L + + A VL EM G PN++ + ++ ++ G
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+ A + ++ +G ++TY L+ GY K G+ +A +++ EM G N+ ++
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+I C A + +ML R P L +I LC+ GK A ELW + L K
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAG 414
+ D S+ ++H LC+ GK+ EA ++ E RG + ++YNTLI+G C +L EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEG 473
D+MV++G++P+ +TY++LI G + +E I+ ++ G P+ ++S++I+G
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 181/356 (50%), Gaps = 6/356 (1%)
Query: 152 LNTLLNALVQNKRYD-LVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
L TL++ L ++ ++ + L F+ F V + T N L+ LC+ ++ A R+ E
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGF--VVDTRTSNALLHGLCEAGKLDEAFRIQKE 543
Query: 211 MPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGR 270
+ G V + V++ T++ G + ++ A +++ RG PD TY++L+ G + +
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ +A++ D+ + NG+ P+ TY VMI+ CK +++ E + D+M+ + P++ +
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 663
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RG 389
+I C G++ A EL + + K P++A +++I + ++ EAK LF+E G
Sbjct: 664 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 723
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
P++ Y LI G + ++ + L +M K V PN TY ++I G+ + GN E
Sbjct: 724 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 783
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNFLL 505
R+L EM +KG P+ ++ I G + G E K + +E WN L+
Sbjct: 784 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIE--GWNKLI 837
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 185/412 (44%), Gaps = 14/412 (3%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++ L RA+ +L E+ + P + NL + I L + +K
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL--NKAIEIKD 402
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRH-KFKVVPNVFTCNILIKAL 195
+ + ++ S + NTL+ +N + D + K F V FT I + L
Sbjct: 403 LMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL--L 458
Query: 196 CKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDA 255
C + A+R + EM M P TT++ G G A ++ L++G+V D
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
T L+ G + G+L +A ++ E+ G + V+Y +I C KK EA LD+
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++R P + +I L KVE+A + W R +PD S +I CK +
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 376 IWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
E ++ FDE ++ P+ + YN LI C S L+ A L +DM KG+ PN TY
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
LI+G I +E + EEM +G PN ++ LI+G G G++ KV
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY---GKLGQMVKV 747
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 166/347 (47%), Gaps = 5/347 (1%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
+ P+ TCNIL+ +L + ++ + D + G+ P++ TT + + G +E A
Sbjct: 235 MFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAV 293
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
++F + + G P+ T+ ++DG GR +A ++M + G+EP +TY ++++
Sbjct: 294 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 353
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
+ K+ G+A +L +M ++ + P+ + +ID E G + A E+ ++ K +
Sbjct: 354 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 413
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+ +T+I CK G+ A++L E G + ++ ++I +C A R +
Sbjct: 414 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M+ + + P LI G CK G + + + + L+KG + + + L+ GL E+G
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 480 EGEVGKVVSMATASGSV-ESDSWNFLLTRIVS--DLDSGAGALDELL 523
E ++ G V + S+N L++ LD LDE++
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
VF + ++G P TT +L+ ++ + D + GV P+ + I AFC
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFC 284
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361
KG GKVE+A +L+ ++ P+
Sbjct: 285 KG-----------------------------------GKVEEAVKLFSKMEEAGVAPNVV 309
Query: 362 ISSTIIHWLCKEGKIWEAKKLFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
+T+I L G+ EA +F E ERG P+L+TY+ L+ G+ + + +A + +
Sbjct: 310 TFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE 368
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M +KG PNV YN LI F + G+ + I I + M+ KG ++++ LI+G ++G
Sbjct: 369 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 428
Query: 480 EGEVGKVV-SMATASGSVESDSWNFLLTRIVSDL--DSGAGALDELLVKN 526
+++ M + +V S+ ++ + S L DS + E+L++N
Sbjct: 429 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 331 VIDLLCEEGKVEDAC----ELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+I++ C + K D C +++ L K P + ++ L + + + + FD
Sbjct: 207 LIEVYCTQFK-RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 265
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G P + + T I C+ ++ EA +L+ M E GV PNV T+N +I G G
Sbjct: 266 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
E E+M+++G P ++S+L++GL + G+ V+ T G
Sbjct: 326 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 373
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 224/458 (48%), Gaps = 28/458 (6%)
Query: 44 PKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTE 103
P+ LV + +++ LA + F ++ F H+ ++Y + H L AR + S+L E
Sbjct: 112 PRVLVEL---KEDPKLAFKFFKWSMT-RNGFKHSVESYCIVAHILFCARMYYDANSVLKE 167
Query: 104 LKQN------------------PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
+ + P + LF +I G E A++ F ++++F V
Sbjct: 168 MVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRV 223
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAI 205
RS N LL+ + + D V FK+ P VFT NI+I +CK+ DVE A
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 206 RVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGY 265
+ +EM G+VP+ VT+ +++ G+ G +++ F ++ D PD TY L++ +
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 266 IKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
K G+L ++ EM+ NG++PN V+Y +++AFCK +A DM + VP+
Sbjct: 343 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Query: 326 ALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDE 385
+ID C+ G + DA L +L+ + + +I LC ++ EA++LF +
Sbjct: 403 YTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK 462
Query: 386 FER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+ G IP+L +YN LI G ++ + A L +++ +G++P++ Y I G C +
Sbjct: 463 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+ ++ EM + G N ++ L++ ++SGN E
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 195/405 (48%), Gaps = 10/405 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+ +I + + +A L E+K + + ++I +G GR + V F
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP-DTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
++ + V + N L+N + + + L F + PNV + + L+ A CK+
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLP-IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ AI+ +M +G+VPN T+T+++ G++ +A R+ ++L G + TYT
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+DG R+ +A ++ +M+ GV PN +Y +I F K K A LL+++ R
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
P L I LC K+E A + + ++ I +T++ K G E
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 380 KKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEA----GRLWDDMVEKGVEPNVFTYNM 434
L DE + I +++T+ LI G+C++ +++A R+ +D G++ N +
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF---GLQANAAIFTA 618
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
+I G CK + + E+M+ KG P++T+++ L++G ++ GN
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 24/368 (6%)
Query: 172 FKNSRHKFKVVPNVFTCN-------------ILIKALCKKDDVEGAIRVLDEMPSMGMVP 218
FK+S + +V ++ C +L KA C DV + R + VP
Sbjct: 138 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNV-------CVP 190
Query: 219 NLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
+ + G +E A + F + P + L+ + KLG+ D +
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
+M G P TY +MI+ CK AR L ++M R VP + +ID +
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTY 397
G+++D ++ + C PD + +I+ CK GK+ + + E + G P++++Y
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 398 NTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD 457
+TL+ C+ + +A + + DM G+ PN +TY LI CKIGN + R+ EML
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 458 KGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVES-DSWNFLLTRIV--SDLDS 514
G N +++ LI+GL ++ E ++ +G + + S+N L+ V ++D
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 515 GAGALDEL 522
L+EL
Sbjct: 491 ALELLNEL 498
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 191/400 (47%), Gaps = 10/400 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT---VIRNYGLAGRPELAVKT 136
TY+S+I + D E+K C E IT +I + G+ + ++
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKD----MCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
+ ++ ++ +V S +TL++A + + + R + +VPN +T LI A C
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR-RVGLVPNEYTYTSLIDANC 413
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
K ++ A R+ +EM +G+ N+VT+T ++ G ++ A+ +FG + G +P+
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
+Y L+ G++K + A+++++E++ G++P+ + YG I C +K A+ ++++M
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
+ +S + ++D + G + L + + +I LCK +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 377 WEAKKLFDEFER--GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
+A F+ G + + +I G+C+ ++ A L++ MV+KG+ P+ Y
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
L+ G K GN E + + ++M + G + +++ L+ GL
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
N +Y+++IH +A+ D LL ELK IK L+ T I + E A
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVHLMFKNSRHKFKVVPNVFTCNILIKAL 195
+++ ++ + TL++A ++ + +HL+ + + + V T +LI L
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL--DEMKELDIEVTVVTFCVLIDGL 587
Query: 196 CKKDDVEGAIRVLDEMPS-MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPD 254
CK V A+ + + + G+ N T ++ G +E A +F ++ +G VPD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 255 ATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLD 314
T YT LMDG K G + +A+ + D+M + G++ + + Y ++ + +AR+ L+
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP---DNAI 362
+M+ P LC V+ E G +++A EL L++ + DNA+
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNAL 758
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 73/321 (22%)
Query: 145 VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGA 204
V+ +V + L++ L +R +F V+PN+ + N LI K +++ A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELF-GKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ +L+E+ G+ P+L+ + T + G IE AK V ++ + G ++ YT LMD
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 265 YIKLGRLTDAVKVMDEME------------------------------------DNGVEP 288
Y K G T+ + ++DEM+ D G++
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N + MI+ CK + A L + M+Q+ V
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV-------------------------- 645
Query: 349 KRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCES 407
PD ++++ K+G + EA L D+ E G LL Y +L+ G+
Sbjct: 646 ---------PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Query: 408 AELTEAGRLWDDMVEKGVEPN 428
+L +A ++M+ +G+ P+
Sbjct: 697 NQLQKARSFLEEMIGEGIHPD 717
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 206/417 (49%), Gaps = 8/417 (1%)
Query: 69 KFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAG 128
+F N H++ TY+ + L +A D + +K + + L ++ ++ G
Sbjct: 94 RFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG-VSPNNRLLGFLVSSFAEKG 152
Query: 129 RPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTC 188
+ A T L ++ F V+ +N+LLN LV+ R + +F + +F+ + T
Sbjct: 153 KLHFA--TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF-DEHLRFQSCNDTKTF 209
Query: 189 NILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILD 248
NILI+ LC E A+ +L M G P++VT+ T++ G+ ++ A +F D+
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-K 268
Query: 249 RGWV--PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
G V PD TYT ++ GY K G++ +A ++D+M G+ P VT+ V+++ + K +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
A + M+ P +ID C G+V LW+ + + P+ S +
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 367 IHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
I+ LC E ++ +A++L + + IP YN +I G C++ ++ EA + ++M +K
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482
+P+ T+ +LI G C G E + I +M+ GC P+K + S L+ L ++G E
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 5/377 (1%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+ R+ AG +LA + F ++ V + R L L+++ + + + S F
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS---F 165
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+V N L+ L K D VE A+++ DE + T ++ G G E A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV-EPNEVTYGVMIE 298
+ G + G PD TY L+ G+ K L A ++ +++ V P+ VTY MI
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
+CK K EA +LLDDML+ P++ ++D + G++ A E+ +++ C P
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLW 417
D +++I C+ G++ + +L++E RG P+ TY+ LI +C L +A L
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
+ K + P F YN +I GFCK G E I+EEM K C P+K +F++LI G
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 478 GNEGEVGKVVSMATASG 494
G E + A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 2/314 (0%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
F +IR G+ E A++ + F + + + NTL+ ++ + MFK+ +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 177 HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDI 236
P+V T +I CK + A +LD+M +G+ P VT ++ GY G++
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVM 296
A+ + G ++ G PD T+T L+DGY ++G+++ ++ +EM G+ PN TY ++
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 297 IEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNC 356
I A C + +AR LL + + +P + VID C+ GKV +A + + + +K C
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 357 MPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGR 415
PD + +I C +G+++EA +F + G P +T ++L++ + ++ EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 416 LWDDMVEKGVEPNV 429
L + + KG NV
Sbjct: 509 L-NQIARKGQSNNV 521
Score = 35.8 bits (81), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 292 TYGVMIEAFCKGKKSG-EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
T+ I F G +AR L ++ + + P + L V L D C +
Sbjct: 5 TFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCY-- 62
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKI----WEAKKLFDEFERGSIPSLLTYNTLIAGMCE 406
L KN P IS ++ L I WE F F+ S TYN L +C+
Sbjct: 63 -LSKNLNP--FISFEVVKKLDNNPHIGFRFWE----FSRFKLNIRHSFWTYNLLTRSLCK 115
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLD-KGC 460
+ AG++++ M GV PN L+ F + G +L + + +GC
Sbjct: 116 AGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC 170
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 212/420 (50%), Gaps = 17/420 (4%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLL--TELKQNPEIKCGENLFITVIRNYGLAGRPE 131
FSH ++ ++ L RAR + + L E + N +K + F ++IR+YG AG +
Sbjct: 96 FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQ 155
Query: 132 LAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNIL 191
+VK F +++ + SV + N+LL+ L++ R + H +F R + V P+ +T N L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 192 IKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGW 251
I CK V+ A R+ +M P++VT+ TI+ G G ++ A V +L +
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 252 --VPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
P+ +YT L+ GY + +AV V +M G++PN VTY +I+ + + E
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI 335
Query: 310 RNLL---DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+++L +D + P + +I C+ G ++ A ++++ +L PD+A S +
Sbjct: 336 KDILIGGNDAFT-TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVL 394
Query: 367 IHWLCKEGKIWEAKKLFDE-FERGSI-------PSLLTYNTLIAGMCESAELTEAGRLWD 418
I LC + A+ LF+E FE+ + P YN + +C + + +A +++
Sbjct: 395 IRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR 454
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
++++GV+ + +Y LI G C+ G K +L ML + P+ ++ LLI+GL + G
Sbjct: 455 QLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 218/501 (43%), Gaps = 49/501 (9%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLT-ELK 105
L++ + +D A +IF +H N + TY++II L RA ++L+ LK
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCN--PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLK 272
Query: 106 QNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY 165
+ ++ + T++R Y + + AV F + ++ + + NTL+ L + RY
Sbjct: 273 KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRY 332
Query: 166 DLVHLMFKNSRHKFKV-VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHT 224
D + + F P+ T NILIKA C ++ A++V EM +M + P+ +++
Sbjct: 333 DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 392
Query: 225 TILGGYVWRGDIENAKRVFGDILDRGWV-------PDATTYTVLMDGYIKLGRLTDAVKV 277
++ R + + A+ +F ++ ++ + P A Y + + G+ A KV
Sbjct: 393 VLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKV 452
Query: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337
++ GV+ + +Y +I C+ K A LL ML+R++VP +ID L +
Sbjct: 453 FRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 511
Query: 338 EGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK---------------EGKIWE---- 378
G+ A + +R+LR + +P +++ L K E +I +
Sbjct: 512 IGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDL 571
Query: 379 ----AKKLFD--EFERGSIPSLLTYNT--------LIAGMCESAELTEAGRLWDDMVEKG 424
+ LF + E+ + L Y+ L+ +CE+ +L +A L +EK
Sbjct: 572 STQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKS 631
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
++ T N +I+G CK E + E+++ G + +L L +G E+
Sbjct: 632 QMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQ 691
Query: 485 KVVS-MATASGSVESDSWNFL 504
V MAT ESD + L
Sbjct: 692 FVSKRMATLR---ESDDCSVL 709
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 37/233 (15%)
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ Y G ++VK+ M+ G+ P+ +T+ ++ K ++G A +L D+M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM- 199
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+R Y PD+ +T+I+ CK +
Sbjct: 200 RRTY---------------------------------GVTPDSYTFNTLINGFCKNSMVD 226
Query: 378 EAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKG--VEPNVFTYNM 434
EA ++F + E P ++TYNT+I G+C + ++ A + M++K V PNV +Y
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVV 487
L++G+C E + + +ML +G PN +++ LI+GL E+ E+ ++
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 207/396 (52%), Gaps = 3/396 (0%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+SI++ + R+ LL ++++ +K + T+I + G + A+ F
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ SV + N+L+ L + +++ L+ K+ + ++VPNV T N+L+ K+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEG 312
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
++ A + EM + G+ PN++T+ T++ GY + + A + ++ PD T+T
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L+ GY + R+ D +KV + G+ N VTY ++++ FC+ K A L +M+
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 320 KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA 379
+P ++D LC+ GK+E A E+++ L + + +TII +CK GK+ +A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 380 KKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
LF +G P+++TY +I+G+C+ L+EA L M E G PN TYN LI+
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ G+ +++EEM G + +S ++I+ L
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 205/386 (53%), Gaps = 3/386 (0%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVF 186
+G LA+ ++E+ NV+ V + +T++++L ++ D +FK K + +V
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVV 264
Query: 187 TCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDI 246
T N L++ LCK +L +M S +VPN++T +L +V G ++ A ++ ++
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 247 LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKS 306
+ RG P+ TY LMDGY RL++A ++D M N P+ VT+ +I+ +C K+
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 307 GEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTI 366
+ + ++ +R V ++ ++ C+ GK++ A EL++ ++ +PD +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 367 IHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGV 425
+ LC GK+ +A ++F++ ++ + ++ Y T+I GMC+ ++ +A L+ + KGV
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 426 EPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGK 485
+PNV TY ++I G CK G+ E +L +M + G PN +++ LI G+ K
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 486 VV-SMATASGSVESDSWNFLLTRIVS 510
++ M + S ++ S ++ ++S
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++E + ++ +LN ++N + + + + K P+ T N LIK L +
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL-GKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A+ ++D M G P++VT+ +I+ G GD A + + +R D TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
+ ++D + G + A+ + EME G++ + VTY ++ CK K + LL DM+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
R+ VP+ ++D+ +EGK+++A EL+K ++ + P+ +T++ C + ++ E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 379 AKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQ 437
A + D R P ++T+ +LI G C + + +++ ++ ++G+ N TY++L+Q
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 438 GFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
GFC+ G K + +EM+ G P+ ++ +L++GL ++G
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 183/438 (41%), Gaps = 83/438 (18%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + +V+ I R + LAL + N + TY +II L R DA
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKME--ERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGR---PELAVKTFLRIE------KFNV---- 145
SL E+ + IK + +++R AG+ L +K + E FNV
Sbjct: 249 SLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 146 ----------------------QRSVRSLNTLLNALVQNKRY----DLVHLMFKNSRHKF 179
++ + NTL++ R +++ LM +N
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN----- 362
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
K P++ T LIK C V+ ++V + G+V N VT++ ++ G+ G I+ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ +F +++ G +PD TY +L+DG G+L A+++ ++++ + ++ V Y +IE
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
CKG GKVEDA L+ L K P+
Sbjct: 483 MCKG-----------------------------------GKVEDAWNLFCSLPCKGVKPN 507
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWD 418
+ +I LCK+G + EA L + E G+ P+ TYNTLI +LT + +L +
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 419 DMVEKGVEPNVFTYNMLI 436
+M G + + M+I
Sbjct: 568 EMKSCGFSADASSIKMVI 585
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 378 EAKKLFDEFERGS-IPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+A LF E R +PSL+ ++ + + + + + G+ N++T N++I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
FC+ +L +++ G P+ T+F+ LI+GL+ G E +V +G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 171/320 (53%), Gaps = 10/320 (3%)
Query: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
A K F I K ++Q +V S NTL+N + D K+ K + P+VFT + LI
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD-EGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
ALCK++ ++GA + DEM G++PN V TT++ G+ G+I+ K + +L +G
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD Y L++G+ K G L A ++D M G+ P+++TY +I+ FC+G A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 313 LDDMLQR----KYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIH 368
+M Q V SAL C +C+EG+V DA + +LR PD+ + ++
Sbjct: 438 RKEMDQNGIELDRVGFSALVCG----MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 369 WLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
CK+G KL E + G +PS++TYN L+ G+C+ ++ A L D M+ GV P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 428 NVFTYNMLIQGFCKIGNAKE 447
+ TYN L++G + N+ +
Sbjct: 554 DDITYNTLLEGHHRHANSSK 573
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 219/529 (41%), Gaps = 66/529 (12%)
Query: 26 LSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKF---HPNFSHNYDTYH 82
S+ T P I+ L +V +I L L + KF P F +TY
Sbjct: 64 FSSFTDCPSIRKVLPSLSVHHVVDLI-NHNPLSLPQRSIFAFFKFISSQPGFRFTVETYF 122
Query: 83 SIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIR----------------NYGL 126
+ LA F +SL+ + ++FI+++ Y
Sbjct: 123 VLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTD 182
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNV 185
G A++ F K +R LL+ +++ N + + F + NV
Sbjct: 183 LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPL--NV 240
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV--- 242
+ NIL+ CK+ ++ A +V DE+ + P +V+ T++ GY G+++ R+
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 243 --------------------------------FGDILDRGWVPDATTYTVLMDGYIKLGR 270
F ++ RG +P+ +T L+ G+ + G
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 271 LTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCK 330
+ + +M G++P+ V Y ++ FCK ARN++D M++R P
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 331 VIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS 390
+ID C G VE A E+ K + + D S ++ +CKEG++ +A++ E R
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 391 I-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
I P +TY ++ C+ + +L +M G P+V TYN+L+ G CK+G K
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGLYESGNEG-------EVGKVVSMAT 491
+L+ ML+ G P+ +++ L+EG + N E+G V +A+
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLAS 589
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 40/372 (10%)
Query: 172 FKNSR-HKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
F+ SR H+F V + C L+ + K + E+ G N+ ++ +
Sbjct: 193 FRLSRKHRFDV--PIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF 250
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
G+I +A++VF +I R P ++ L++GY K+G L + ++ +ME + P+
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDV 310
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
TY +I A CK K A L D+M +R +P+ + +I G+++ E +++
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLI-------- 401
+L K PD + +T+++ CK G + A+ + D RG P +TY TLI
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 402 ---------------------------AGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
GMC+ + +A R +M+ G++P+ TY M
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
++ FCK G+A+ G ++L+EM G P+ ++++L+ GL + G ++ G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 495 SVESD-SWNFLL 505
V D ++N LL
Sbjct: 551 VVPDDITYNTLL 562
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 183/331 (55%), Gaps = 11/331 (3%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVP---NVFTCNILIKALCKKDDVEGA 204
S+ + +L+ + ++K YDLV +F H +V ++++ NI+I LC+ A
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLF----HHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 205 IRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDG 264
+ V+ +M G P++VT ++++ G+ + +A + + + G+ PD Y ++DG
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 265 YIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPS 324
K+G + DAV++ D ME +GV + VTY ++ C + +A L+ DM+ R VP+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 325 SALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD 384
VID+ +EGK +A +L++ + R+ PD +++I+ LC G++ EAK++ D
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 385 -EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIG 443
+G +P ++TYNTLI G C+S + E +L+ +M ++G+ + TYN +IQG+ + G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 444 NAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I M + PN ++S+L+ GL
Sbjct: 364 RPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 228/445 (51%), Gaps = 13/445 (2%)
Query: 33 PPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARAR 92
P I P+ R + + + ++ +++L +I + + + ++ K+A+++
Sbjct: 27 PVIVPFISRFWGRTFST---KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK 83
Query: 93 AFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVR 150
+D V SL ++ G +L+ VI R +A+ ++ KF + V
Sbjct: 84 NYDLVISLFHHMEV---CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140
Query: 151 SLNTLLNALVQ-NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLD 209
++++L+N Q N+ +D + L+ K F+ P+V N +I CK V A+ + D
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFR--PDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 210 EMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLG 269
M G+ + VT+ +++ G G +A R+ D++ R VP+ T+T ++D ++K G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 270 RLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCC 329
+ ++A+K+ +EM V+P+ TY +I C + EA+ +LD M+ + +P
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 330 KVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG 389
+I+ C+ +V++ +L++ + ++ + D +TII + G+ A+++F +
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD-- 376
Query: 390 SIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGI 449
S P++ TY+ L+ G+C + + +A L+++M + +E ++ TYN++I G CKIGN ++
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 450 RILEEMLDKGCFPNKTSFSLLIEGL 474
+ + KG P+ S++ +I G
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY+S++ L + + L+ ++ +I F VI + G+ A+K +
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+ + V V + N+L+N L + R D M K +P+V T N LI CK
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVVTYNTLINGFCKSK 328
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR---------- 249
V+ ++ EM G+V + +T+ TI+ GY G + A+ +F + R
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Query: 250 -----GWVP-----------------DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVE 287
W D TTY +++ G K+G + DA + + G++
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 288 PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRK 320
P+ V+Y MI FC+ ++ ++ D+L RK
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKS-----DLLYRK 476
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 42/210 (20%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFL 138
TY+++I+ +++ D L E+ Q + G+ + + T+I+ Y AGRP+ A + F
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLV--GDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
R++ SR PN+ T +IL+ LC
Sbjct: 374 RMD---------------------------------SR------PNIRTYSILLYGLCMN 394
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
VE A+ + + M + ++ T+ ++ G G++E+A +F + +G PD +Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEP 288
T ++ G+ + + + + +M+++G+ P
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 182/332 (54%), Gaps = 2/332 (0%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+V+ K+YD+V + K + +++T NI+I C V A+ +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKK-MEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P+ VT +++ G+ R + +A + +++ G+ PD Y ++D K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
R+ DA E+E G+ PN VTY ++ C + +A LL DM+++K P+
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-EF 386
++D + GKV +A EL++ ++R + PD S++I+ LC +I EA ++FD
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 387 ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446
+G + +++YNTLI G C++ + + +L+ +M ++G+ N TYN LIQGF + G+
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 447 EGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+ +M G P+ ++++L+ GL ++G
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 154 TLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPS 213
T L + N DL M K+ + P++ N L+ A+ K + I + +M
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKS-----RPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 214 MGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTD 273
+G+ +L T ++ + + A + G +L G+ PD T L++G+ + R++D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
AV ++D+M + G +P+ V Y +I++ CK K+ +A + ++ ++ P+ +++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-P 392
LC + DA L +++K P+ S ++ K GK+ EAK+LF+E R SI P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
++TY++LI G+C + EA +++D MV KG +V +YN LI GFCK ++G+++
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESDSWNF 503
EM +G N +++ LI+G +++G+ + + S G + D W +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTY 403
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 226/457 (49%), Gaps = 7/457 (1%)
Query: 45 KRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
+RL R L+ A+ +F K P F D ++ ++ + + + +D V SL ++
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRP-FPSIVD-FNRLLSAIVKLKKYDVVISLGKKM 111
Query: 105 KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
+ I+ F VI + + LA+ ++ K + ++ +L+N + R
Sbjct: 112 -EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 165 Y-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D V L+ K +K P++ N +I +LCK V A E+ G+ PN+VT+
Sbjct: 171 VSDAVSLVDKMVEIGYK--PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T ++ G +A R+ D++ + P+ TY+ L+D ++K G++ +A ++ +EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
++P+ VTY +I C + EA + D M+ + + +I+ C+ +VED
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
+L++ + ++ + + +T+I + G + +A++ F + + G P + TYN L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G+C++ EL +A +++DM ++ ++ ++ TY +I+G CK G +E + + KG P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSVESD 499
+ +++ ++ GL G EV + + G +++D
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 172/351 (49%), Gaps = 2/351 (0%)
Query: 119 TVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK 178
+++ + R AV ++ + + + + N ++++L + KR + FK K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 179 FKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIEN 238
+ PNV T L+ LC A R+L +M + PN++T++ +L +V G +
Sbjct: 220 -GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 239 AKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIE 298
AK +F +++ PD TY+ L++G R+ +A ++ D M G + V+Y +I
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 299 AFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMP 358
FCK K+ + L +M QR V ++ +I + G V+ A E + ++ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 359 DNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLW 417
D + ++ LC G++ +A +F++ ++ + ++TY T+I GMC++ ++ EA L+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 418 DDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ KG++P++ TY ++ G C G E + +M +G N + S
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 19/336 (5%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTEL---KQNPEIKCGENLFITVIRNYGLAGRPELA 133
N TY ++++ L + + LL+++ K P + L ++N G+ A
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN----GKVLEA 279
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
+ F + + ++ + + ++L+N L + R D + MF K + +V + N LI
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLIN 338
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
CK VE +++ EM G+V N VT+ T++ G+ GD++ A+ F + G P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D TY +L+ G G L A+ + ++M+ ++ + VTY +I CK K EA +L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+ + P ++ LC +G + + L+ ++ ++ M ++ S +
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------D 510
Query: 374 GKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESA 408
G I + +L + G PSLL + +G+C+ A
Sbjct: 511 GDITLSAELIKKMLSCGYAPSLL--KDIKSGVCKKA 544
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 225/442 (50%), Gaps = 6/442 (1%)
Query: 37 PWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDA 96
P + + + VS++ R+++ L IF+ A + F+HN TY ++ L R + F A
Sbjct: 49 PKTKFISHESAVSLMKRERDPQGVLDIFNKASQ-QKGFNHNNATYSVLLDNLVRHKKFLA 107
Query: 97 VESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKF-NVQRSVRSLNTL 155
V+++L ++K + E+LF+ ++R++ + + ++ F I+ V+ S+ +++T
Sbjct: 108 VDAILHQMKYET-CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTC 166
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
LN L+ + +L + ++H + PN NIL+K CK D+ A V++EM G
Sbjct: 167 LNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 216 M-VPNLVTHTTILGGYVWRGDIENAKRVFGDILDR-GWVPDATTYTVLMDGYIKLGRLTD 273
+ PN +T++T++ + A +F D++ + G PD T+ V+++G+ + G +
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333
A K++D M+ NG PN Y ++ FCK K EA+ D++ + + +++
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIP 392
C G+ ++A +L + C D + I+ L EG+ EA ++ D++ G
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
+ +Y ++ +C + EL +A + M E+G+ P+ T+N L+ C+ G + G+R+L
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 453 EEMLDKGCFPNKTSFSLLIEGL 474
L G P S+ ++E +
Sbjct: 467 IGFLRIGLIPGPKSWGAVVESI 488
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 181/364 (49%), Gaps = 7/364 (1%)
Query: 151 SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDE 210
+ + LL+ LV++K++ V + +++ N L++ + D + + + +
Sbjct: 91 TYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLN-LMRHFSRSDLHDKVMEMFNL 149
Query: 211 MPSMGMV-PNLVTHTTILGGYVWRGDIENAKRVF-GDILDRGWVPDATTYTVLMDGYIKL 268
+ + V P+L +T L + G++ ++++ + G P+ + +L+ + K
Sbjct: 150 IQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKN 209
Query: 269 GRLTDAVKVMDEMEDNGVE-PNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
G + A V++EM+ +G+ PN +TY +++ +S EA L +DM+ ++ + +
Sbjct: 210 GDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPV 269
Query: 328 CCKV-IDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
V I+ C G+VE A ++ + + C P+ S +++ CK GKI EAK+ FDE
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 387 ERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
++ + + Y TL+ C + E EA +L +M + TYN++++G G +
Sbjct: 330 KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRS 389
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGS-VESDSWNFL 504
+E +++L++ +G NK S+ +++ L +G + K +S+ + G +WN L
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Query: 505 LTRI 508
+ R+
Sbjct: 450 VVRL 453
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 148/359 (41%), Gaps = 57/359 (15%)
Query: 83 SIIHKLARAR-AFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRP---ELAVK--- 135
++I +AR + + +A+ + L L + E+ L + N GL + VK
Sbjct: 148 NLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHC 207
Query: 136 -------TFLRIEKFNVQRSVRSL------NTLLNALVQNKRYDLVHLMFKNSRHKFKVV 182
FL +E+ ++RS S +TL++ L + R +F++ K +
Sbjct: 208 KNGDINFAFLVVEE--MKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGIS 265
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+ T N++I C+ +VE A ++LD M G PN+ ++ ++ G+ G I+ AK+
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 243 FGDILDRGWV-----------------------------------PDATTYTVLMDGYIK 267
F ++ G D TY V++ G
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
GR +A++++D+ GV N+ +Y +++ A C + +A L M +R P A
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+++ LCE G E + LR +P ++ +CKE K+ +L D
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK--- 304
+G+ + TY+VL+D ++ + ++ +M+ E + ++ F +
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVE-----------------DACEL 347
K E NL+ + + K PS ++LL + G+V + C +
Sbjct: 142 KVMEMFNLIQVIARVK--PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTC-I 198
Query: 348 WKRLLRKNC---------------------MPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
+ L++ +C P++ ST++ L + EA +LF++
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 387 --ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGN 444
+ G P +T+N +I G C + E+ A ++ D M + G PNV+ Y+ L+ GFCK+G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 445 AKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS-MATASGSVESDSWNF 503
+E + +E+ G + ++ L+ +G E K++ M + ++ ++N
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 504 LLTRIVSD 511
+L + S+
Sbjct: 379 ILRGLSSE 386
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLF--ITVIRNYGLAGRPELAVKTF 137
T++ +I+ RA + + +L +K+N C N++ ++ + G+ + A +TF
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNG---CNPNVYNYSALMNGFCKVGKIQEAKQTF 326
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
++K ++ TL+N +N D + + + + T N++++ L
Sbjct: 327 DEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS-RCRADTLTYNVILRGLSS 385
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
+ E A+++LD+ S G+ N ++ IL G++E A + + +RG P T
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
+ L+ + G V+V+ G+ P ++G ++E+ CK +K LLD ++
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 225/446 (50%), Gaps = 7/446 (1%)
Query: 53 RQQNLDLALQIFHY-AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIK 111
R Q++++ +++F + + + F N S + LAR R F+ +E +L L+ N +K
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLR-NENVK 131
Query: 112 CGENLFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHL 170
V+ Y +G AV+ + +E ++ V + N+LL+ LV+++R
Sbjct: 132 LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARK 191
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
++ + V N TC IL+K +C + VE ++++ G +PN+V + TI+GGY
Sbjct: 192 VYDEMCDRGDSVDNYSTC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGY 250
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
GDIENA VF ++ +G++P T+ +++G+ K G + +++ E+++ G+ +
Sbjct: 251 CKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSV 310
Query: 291 VTYGVMIEA-FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+I+A + G K A ++ ++ P A +I+ LC+EGK E A
Sbjct: 311 WFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
+K +P+N + +I CK + A KL + ERG P ++TY LI G+ S
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
+ +A + ++++GV P+ YNML+ G CK G + EMLD+ P+ ++
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 469 LLIEGLYESGNEGEVGKVVSMATASG 494
LI+G SG+ E KV S++ G
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKG 515
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 146/293 (49%), Gaps = 1/293 (0%)
Query: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242
P+V T NILI LCK+ E A+ LDE G++PN +++ ++ Y + + A ++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302
+ +RG PD TY +L+ G + G + DAV + ++ D GV P+ Y +++ CK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 303 GKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAI 362
+ A+ L +ML R +P + + +ID G ++A +++ + K D
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 363 SSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
+ +I C+ G + EA + E +P TY+T+I G + ++ A +++ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+ +PNV TY LI GFC G+ K +EM + PN +++ LI L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 22/386 (5%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGL--AGRPELAVKTF 137
+Y +I +++ +D LL ++ E C ++ I +GL +G + AV
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQM---AERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+++ V N L++ L + R+ L+F + ++P+ + LI +
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR-NILPDAYVYATLIDGFIR 497
Query: 198 KDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATT 257
D + A +V G+ ++V H ++ G+ G ++ A + + VPD T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 258 YTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
Y+ ++DGY+K + A+K+ ME N +PN VTY +I FC A +M
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 318 QRKYVPSSALCCKVIDLLCEEGK-VEDACELWKRLLRKNCMPDNAISSTIIHWLCKE--G 374
R VP+ +I L +E +E A W+ ++ C+P+ + ++ K+ G
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677
Query: 375 KIWE--------AKKLFDEF-----ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMV 421
K+ LF EF G YN+ + +C + A D MV
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 422 EKGVEPNVFTYNMLIQGFCKIGNAKE 447
+KG P+ ++ ++ GFC +GN+K+
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 117 FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSR 176
+ T+I Y A+K F +EK + +V + +L+N + + FK +
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 177 HKFKVVPNVFTCNILIKALCKKDD-VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWR-- 233
+ +VPNV T LI++L K+ +E A+ + M + VPN VT +L G+V +
Sbjct: 618 LR-DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 234 --------GDIENAKRVFGDILDR----GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
G +F + R GW A Y + G + A D+M
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKM 736
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
G P+ V++ ++ FC S + RN+
Sbjct: 737 VKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 213/444 (47%), Gaps = 36/444 (8%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + TY S++ L + R D+V LL E+ + +K F IR G AG+ A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF---KNSRHKFKVV-------- 182
+ R++ V + L++AL ++ D +F K RHK V
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 183 -----------------------PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPN 219
P+V T IL+ ALCK + A LD M G++PN
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 220 LVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMD 279
L T+ T++ G + +++A +FG++ G P A TY V +D Y K G A++ +
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 280 EMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEG 339
+M+ G+ PN V + + K + EA+ + + VP S ++ + G
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYN 398
++++A +L ++ C PD + +++I+ L K ++ EA K+F + + P+++TYN
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
TL+AG+ ++ ++ EA L++ MV+KG PN T+N L CK +++L +M+D
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 459 GCFPNKTSFSLLIEGLYESGNEGE 482
GC P+ +++ +I GL ++G E
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKE 661
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 191/397 (48%), Gaps = 11/397 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
+ +I + D S L N + G+++ + +IR Y +T
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR-YSCKHNNVSGARTLF-- 772
Query: 141 EKFN----VQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
EKF VQ + + N L+ L++ ++ +F + +P+V T N L+ A
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST-GCIPDVATYNFLLDAYG 831
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL-DRGWVPDA 255
K ++ + EM + N +TH ++ G V G++++A ++ D++ DR + P A
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 256 TTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDD 315
TY L+DG K GRL +A ++ + M D G PN Y ++I F K ++ A L
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 316 MLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375
M++ P ++D LC G+V++ +K L PD + II+ L K +
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 376 IWEAKKLFDEFE--RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
+ EA LF+E + RG P L TYN+LI + + + EAG++++++ G+EPNVFT+N
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
LI+G+ G + + + M+ G PN ++ L
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 200/416 (48%), Gaps = 16/416 (3%)
Query: 47 LVSMIFRQQNLDLALQIFHY--AGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTEL 104
L+ + + LD A ++F G+ P+ TY +++ + + R D+V+ +E+
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRV----TYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 105 KQN---PEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQ 161
+++ P++ F ++ AG A T + + ++ + NTL+ L++
Sbjct: 355 EKDGHVPDVVT----FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 162 NKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLV 221
R D +F N V P +T + I K D A+ ++M + G+ PN+V
Sbjct: 411 VHRLDDALELFGN-MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
L G AK++F + D G VPD+ TY ++M Y K+G + +A+K++ EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+NG EP+ + +I K + EA + M + K P+ ++ L + GK+
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEA-KKLFDEFERGSIPSLLTYNTL 400
++A EL++ +++K C P+ +T+ LCK ++ A K LF + G +P + TYNT+
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEML 456
I G+ ++ ++ EA + M +K V P+ T L+ G K ++ +I+ L
Sbjct: 650 IFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 167/341 (48%), Gaps = 4/341 (1%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F+ V P + T N+LI L + D +E A V ++ S G +P++ T+ +L Y
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM-DEMEDNGVEPN 289
G I+ ++ ++ + T+ +++ G +K G + DA+ + D M D P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
TYG +I+ K + EA+ L + ML P+ A+ +I+ + G+ + AC L+K
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESA 408
R++++ PD S ++ LC G++ E F E E G P ++ YN +I G+ +S
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 409 ELTEAGRLWDDM-VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSF 467
L EA L+++M +G+ P+++TYN LI G +E +I E+ G PN +F
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 468 SLLIEGLYESGN-EGEVGKVVSMATASGSVESDSWNFLLTR 507
+ LI G SG E +M T S + ++ L R
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 189/404 (46%), Gaps = 5/404 (1%)
Query: 128 GRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFT 187
G+ E F ++K ++R + T+ +L + R +F V N ++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR-EFGFVLNAYS 190
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N LI L K A+ V M G P+L T+++++ G R DI++ + ++
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
G P+ T+T+ + + G++ +A +++ M+D G P+ VTY V+I+A C +K
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
A+ + + M ++ P ++D + ++ + W + + +PD + ++
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 368 HWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
LCK G EA D ++G +P+L TYNTLI G+ L +A L+ +M GV+
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P +TY + I + K G++ + E+M KG PN + + + L ++G + E ++
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 487 VSMATASGSV-ESDSWNFLLT--RIVSDLDSGAGALDELLVKNC 527
G V +S ++N ++ V ++D L E++ C
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 38/290 (13%)
Query: 191 LIKALCKKDDVEGAIRVLDEMP-SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+I+ CK ++V GA + ++ +G+ P L T+ ++GG + IE A+ VF +
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G +PD TY L+D Y K G++ + ++ EM + E N +T+ ++I K
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA------ 868
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLR-KNCMPDNAISSTIIH 368
G V+DA +L+ L+ ++ P +I
Sbjct: 869 -----------------------------GNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 369 WLCKEGKIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEP 427
L K G+++EAK+LF+ + G P+ YN LI G ++ E A L+ MV++GV P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 428 NVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYES 477
++ TY++L+ C +G EG+ +E+ + G P+ ++L+I GL +S
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 206/472 (43%), Gaps = 82/472 (17%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQN---PEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY+ ++ ++ D LL+E+ +N P++ +L T+ + A R + A K
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK----ADRVDEAWKM 560
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
F+R+++ ++ +V + NTLL L +N + +F+ K PN T N L LC
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLC 619
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHT-------------------------------- 224
K D+V A+++L +M MG VP++ T+
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT 679
Query: 225 --TILGGYVWRGDIENAKRVF--------------------GDILDRGWVPDATTYT--- 259
T+L G V IE+A ++ G IL + +A +++
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 260 ----VLMDG----------YIKLGRLTDAVKVMDEM-EDNGVEPNEVTYGVMIEAFCKGK 304
+ DG K ++ A + ++ +D GV+P TY ++I +
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 305 KSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISS 364
A+++ + +P A ++D + GK+++ EL+K + C + +
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 365 TIIHWLCKEGKIWEAKKLFDEF--ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVE 422
+I L K G + +A L+ + +R P+ TY LI G+ +S L EA +L++ M++
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 423 KGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
G PN YN+LI GF K G A + + M+ +G P+ ++S+L++ L
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 1/304 (0%)
Query: 172 FKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYV 231
FK+ +V TCN +++AL +E V D M + + T+ TI
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
+G ++ A + + G+V +A +Y L+ +K T+A++V M G P+
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRL 351
TY ++ K + LL +M P+ I +L GK+ +A E+ KR+
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 352 LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERG-SIPSLLTYNTLIAGMCESAEL 410
+ C PD + +I LC K+ AK++F++ + G P +TY TL+ ++ +L
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 411 TEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLL 470
+ W +M + G P+V T+ +L+ CK GN E L+ M D+G PN +++ L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 471 IEGL 474
I GL
Sbjct: 405 ICGL 408
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 187/333 (56%), Gaps = 4/333 (1%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ + LL+A+ + K+YD+V +++ + + N+ TCNIL+ C+ + A+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQM-LGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGD-IENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
L +M +G P++VT ++L G+ RGD + +A +F ++ G+ P+ Y ++DG
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFC-RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
K ++ +A+ +++ ME +G+ P+ VTY +I C + +A ++ M +R+ P
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFD-E 385
+ID +EG+V +A E ++ ++R++ PD S +I+ LC ++ EA+++F
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 386 FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
+G P ++TY+ LI G C+S ++ +L+ +M ++GV N TY +LIQG+C+ G
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
I M+ G PN ++++L+ GL ++G
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 222/453 (49%), Gaps = 11/453 (2%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ--NPEI 110
R LD +L +F + + P S + ++ +++ + +D V L +++ P
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPS--IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 111 KCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR-YDLVH 169
C N+ + + + LA+ ++ K + S+ + +LLN + R YD ++
Sbjct: 116 LCTCNILLNC---FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
+ + +K PNV N +I LCK V+ A+ +L+ M G+ P++VT+ +++ G
Sbjct: 173 MFDQMVGMGYK--PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +A R+ + R PD T+ L+D +K GR+++A + +EM ++P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
VTY ++I C + EA + M+ + P +I+ C+ KVE +L+
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 350 RLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESA 408
+ ++ + + + +I C+ GK+ A+++F G P+++TYN L+ G+C++
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 409 ELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFS 468
++ +A + DM + G++ ++ TYN++I+G CK G + I + +G P+ +++
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 469 LLIEGLYESGNEGEVGKVVSMATASGSVESDSW 501
++ GLY+ G E + G + ++ +
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGILPNECY 503
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 203/433 (46%), Gaps = 11/433 (2%)
Query: 36 KPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFD 95
+P P RL+S I + + D+ + ++ HN T + +++ R
Sbjct: 76 RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML--GIPHNLCTCNILLNCFCRCSQLS 133
Query: 96 AVESLL---TELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSL 152
S L +L P I F +++ + R A+ F ++ + +V
Sbjct: 134 LALSFLGKMIKLGHEPSIV----TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY 189
Query: 153 NTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMP 212
NT+++ L ++K+ D L N K + P+V T N LI LC A R++ M
Sbjct: 190 NTIIDGLCKSKQVDNA-LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 213 SMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLT 272
+ P++ T ++ V G + A+ + +++ R PD TY++L+ G RL
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 273 DAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVI 332
+A ++ M G P+ VTY ++I +CK KK L +M QR V ++ +I
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 333 DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP 392
C GK+ A E+++R++ P+ + ++H LC GKI +A + + ++ +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 393 S-LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
+ ++TYN +I GMC++ E+ +A ++ + +G+ P+++TY ++ G K G +E +
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 452 LEEMLDKGCFPNK 464
+M + G PN+
Sbjct: 489 FRKMKEDGILPNE 501
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 3/243 (1%)
Query: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301
+ G R + + Y ++ I+ +L D++ + M P+ + ++ A
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDN 360
K KK L + M Q +P + C ++ + C ++ A ++++ P
Sbjct: 93 KMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSI 151
Query: 361 AISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDD 419
++++ C+ ++++A +FD+ G P+++ YNT+I G+C+S ++ A L +
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 420 MVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGN 479
M + G+ P+V TYN LI G C G + R++ M + +P+ +F+ LI+ + G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 480 EGE 482
E
Sbjct: 272 VSE 274
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348
N Y M+ + K ++ +L M+Q + +PS A +++ + + K + LW
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 349 KRLLRKNCMPDNAISSTII-HWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCE 406
+++ +P N + I+ + C+ ++ A + + G PS++T+ +L+ G C
Sbjct: 105 EQMQMLG-IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163
Query: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466
+ +A ++D MV G +PNV YN +I G CK + +L M G P+ +
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 467 FSLLIEGLYESGNEGEVGKVVSMAT 491
++ LI GL SG + ++VS T
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMT 248
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 45/415 (10%)
Query: 148 SVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRV 207
S+ N LL+A+ + +++LV + + +++T +I I C++ + A+ V
Sbjct: 82 SIVEFNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 208 LDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIK 267
L +M +G P++VT +++L GY I +A + +++ G+ PD T+T L+ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 268 LGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSAL 327
+ ++AV ++D+M G +P+ VTYG ++ CK A NLL+ M + + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 328 CCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLC---------------- 371
+ID LC+ VE A +L+ + K P+ +++I+ LC
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 372 -------------------KEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELT 411
KEGK+ EA+KL +E + SI P +TYN LI G C L
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 412 EAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLI 471
EA +++ MV K PN+ TYN LI GFCK ++G+ + EM +G N +++ +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 472 EGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLTRIVSDLDSGAGALDELLV 524
+G +++G + + ++V S V +D +++ LL + S G LD LV
Sbjct: 441 QGFFQAG-DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS-----YGKLDTALV 489
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 201/398 (50%), Gaps = 6/398 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
TY ++++ L + D +LL ++ + IK +F T+I + E+AV F
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD 199
+E ++ +V + N+L+N L R+ + N K K+ PNV T N LI A K+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEG 342
Query: 200 DVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYT 259
+ A ++ +EM + P+ +T+ ++ G+ ++ AK++F ++ + +P+ TY
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 260 VLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQR 319
L++G+ K R+ D V++ EM G+ N VTY +I+ F + A+ + M+
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 320 KYVPSSALCCKVI-DLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ VP+ + ++ LC GK++ A ++K L + + I +T+I +CK GK+ E
Sbjct: 463 R-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 379 AKKLFDEFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQG 438
A LF P ++TYNT+I+G+C L EA L+ M E G PN TYN LI+
Sbjct: 522 AWDLFCSLSIK--PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Query: 439 FCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYE 476
+ + +++EM G + ++ SL+ L++
Sbjct: 580 NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 225/498 (45%), Gaps = 49/498 (9%)
Query: 53 RQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAVESL--LTELKQNPE 109
R+ L LAL + A + + T S+++ + R DAV + + E+ P+
Sbjct: 130 RRSQLSLALAVL--AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 110 IKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVH 169
F T+I L + AV ++ + Q + + T++N L + DL
Sbjct: 188 TFT----FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA- 242
Query: 170 LMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
L N ++ NV N +I +LCK VE A+ + EM + G+ PN+VT+ +++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPN 289
G +A R+ ++L++ P+ T+ L+D + K G+L +A K+ +EM ++P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 290 EVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWK 349
+TY ++I FC + EA+ + M+ + +P+ +I+ C+ +VED EL++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 350 RLLRKNCMPDNAISSTII-----------------------------------HWLCKEG 374
+ ++ + + +TII H LC G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 375 KIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
K+ A +F ++ + ++ YNT+I GMC++ ++ EA WD ++P+V TYN
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYN 539
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
+I G C +E + +M + G PN +++ LI + +++ +S
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 494 GSVESDSWNFLLTRIVSD 511
G V S L+T ++ D
Sbjct: 600 GFVGDASTISLVTNMLHD 617
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 236 IENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
+++A +FGD++ P + L+ K+ + + + ++M+ G+ + TY +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
I FC+ + A +L M++ Y P +++ C ++ DA L +++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAEL---- 410
PD +T+IH L K EA L D+ +RG P L+TY T++ G+C+ ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 411 -----TEAGR--------------------------LWDDMVEKGVEPNVFTYNMLIQGF 439
EA R L+ +M KG+ PNV TYN LI
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 440 CKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV-VSMATASGSVES 498
C G + R+L ML+K PN +F+ LI+ ++ G E K+ M S ++
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 499 DSWNFLLTRIV--SDLDSGAGALDELLVKNC 527
++N L+ + LD ++ K+C
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 11/277 (3%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARA-RAFDAV 97
P + L++ LD A Q+F + + N TY+++I+ + R D V
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFM--VSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 98 ESLLTELKQNPEIKCGENL-FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLL 156
E L E+ Q + G + + T+I+ + AG + A F ++ V + + + LL
Sbjct: 419 E-LFREMSQRGLV--GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 157 NALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM 216
+ L + D ++FK K ++ N+F N +I+ +CK V A D S+ +
Sbjct: 476 HGLCSYGKLDTALVIFK-YLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSI 531
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
P++VT+ T++ G + ++ A +F + + G +P++ TY L+ ++ + +
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
++ EM +G + T ++ G+ N+L
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Query: 340 KVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYN 398
KV+DA +L+ +++ P + ++ + K K L ++ + I L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 399 TLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDK 458
I C ++L+ A + M++ G EP++ T + L+ G+C + + ++++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 459 GCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
G P+ +F+ LI GL+ E +V G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 176/337 (52%), Gaps = 12/337 (3%)
Query: 148 SVRSLNTLLNALVQNKRYDLV-----HLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVE 202
S+ LLN + + K++D+V HL H +++TCN+L+ C+
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH------DLYTCNLLMNCFCQSSQPY 124
Query: 203 GAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLM 262
A L +M +G P++VT T+++ G+ +E A + +++ G PD YT ++
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 263 DGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV 322
D K G + A+ + D+ME+ G+ P+ V Y ++ C + +A +LL M +RK
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
P +ID +EGK DA EL+ ++R + P+ +++I+ C EG + EA+++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 383 FDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCK 441
F E +G P ++ Y +LI G C+ ++ +A +++ +M +KG+ N TY LIQGF +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 442 IGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+G + M+ +G PN ++++L+ L +G
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 167/340 (49%), Gaps = 6/340 (1%)
Query: 156 LNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMG 215
L++L N+ DL M ++ + +P++ L+ + K + I + D + MG
Sbjct: 48 LHSLQFNEALDLFTHMVES-----RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 216 MVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAV 275
+ +L T ++ + A G ++ G+ PD T+T L++G+ R+ +A+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 276 KVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLL 335
++++M + G++P+ V Y +I++ CK A +L D M P + +++ L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 336 CEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSL 394
C G+ DA L + + ++ PD + +I KEGK +A++L++E R SI P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 395 LTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEE 454
TY +LI G C + EA +++ M KG P+V Y LI GFCK + ++I E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 455 MLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
M KG N +++ LI+G + G +V S + G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 202/443 (45%), Gaps = 45/443 (10%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFIT--VIRNYGLAGRPELAVKTFL 138
+ +++ +A+ + FD V +L L+ + +L+ ++ + + +P LA
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQI---MGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 139 RIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKK 198
++ K + + + +L+N R + M N + + P+V +I +LCK
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV-NQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V A+ + D+M + G+ P++V +T+++ G G +A + + R PD T+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQ 318
L+D ++K G+ DA ++ +EM + PN TY +I FC EAR + M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 319 RKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWE 378
+ P +I+ C+ KV+DA +++ + +K + +T+I + GK
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 379 AKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEK---GVEPNVFTYNM 434
A+++F RG P++ TYN L+ +C + ++ +A +++DM ++ GV PN++TYN+
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 435 LI-----------------------------------QGFCKIGNAKEGIRILEEMLDKG 459
L+ QG CK G K + + + KG
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 460 CFPNKTSFSLLIEGLYESGNEGE 482
PN +++ +I GL+ G + E
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHE 513
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 196/391 (50%), Gaps = 8/391 (2%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F + T+ S+I+ + S++ ++ + IK ++ T+I + G A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILI 192
+ F ++E + ++ V +L+N L + R+ D L+ ++ K K P+V T N LI
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK--PDVITFNALI 254
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
A K+ A + +EM M + PN+ T+T+++ G+ G ++ A+++F + +G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
PD YT L++G+ K ++ DA+K+ EM G+ N +TY +I+ F + K A+ +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRK---NCMPDNAISSTIIHW 369
M+ R P+ ++ LC GKV+ A +++ + ++ P+ + ++H
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 370 LCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIA-GMCESAELTEAGRLWDDMVEKGVEPN 428
LC GK+ +A +F++ + + + T+I GMC++ ++ A L+ + KGV+PN
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKG 459
V TY +I G + G E + +M + G
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 5/314 (1%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
Y S+++ L + + +SLL + + +IK F +I + G+ A + + +
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 141 EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDD 200
+ ++ ++ + +L+N D MF K P+V LI CK
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKK 332
Query: 201 VEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTV 260
V+ A+++ EM G+ N +T+TT++ G+ G A+ VF ++ RG P+ TY V
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 261 LMDGYIKLGRLTDAVKVMDEM---EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDML 317
L+ G++ A+ + ++M E +GV PN TY V++ C K +A + +DM
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 318 QRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIW 377
+R+ +I +C+ GKV++A L+ L K P+ +T+I L +EG
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 378 EAKKLFDEFERGSI 391
EA LF + + +
Sbjct: 513 EAHVLFRKMKEDGV 526
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 239/541 (44%), Gaps = 91/541 (16%)
Query: 43 YPKRLVSMIFRQQNL--DLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESL 100
+ L++ I R+ L + L+IF+ A K F +Y Y ++H L+RAR + +S
Sbjct: 68 FSDELLNSILRRLRLNPEACLEIFNLASK-QQKFRPDYKAYCKMVHILSRARNYQQTKSY 126
Query: 101 LTEL---------------KQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNV 145
L EL + E +F +++ Y G + A+ F + +
Sbjct: 127 LCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGR 186
Query: 146 QRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKD------ 199
S+ S N+LL+ LV+ K + V L + F+V P+VFTC+I++ A C+
Sbjct: 187 IPSLLSCNSLLSNLVR-KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM 245
Query: 200 ------------------------------DVEGAIRVLDEMPSMGMVPNLVTHTTILGG 229
DVEG RVL M G+ N+VT+T+++ G
Sbjct: 246 VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKG 305
Query: 230 YVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGV--- 286
Y +G +E A+ VF + ++ V D Y VLMDGY + G++ DAV+V D M + GV
Sbjct: 306 YCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTN 365
Query: 287 --------------------------------EPNEVTYGVMIEAFCKGKKSGEARNLLD 314
+P+ TY +++ +C+ EA L D
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCD 425
Query: 315 DMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEG 374
M Q++ VP+ ++ G D LWK +L++ D ST++ L K G
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485
Query: 375 KIWEAKKLFDE-FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYN 433
EA KL++ RG + +T N +I+G+C+ ++ EA + D++ +P V TY
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 434 MLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATAS 493
L G+ K+GN KE + E M KG FP ++ LI G ++ + +V +V A
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 494 G 494
G
Sbjct: 606 G 606
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 208/464 (44%), Gaps = 50/464 (10%)
Query: 77 NYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
++ TY++++ RA D L ++ Q E+ + +++ Y G A
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQK-EVVPTVMTYNILLKGYSRIG----AFHD 454
Query: 137 FLRIEKFNVQRSVR----SLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192
L + K ++R V S +TLL AL + ++ +++N + ++ + T N++I
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR-GLLTDTITLNVMI 513
Query: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
LCK + V A +LD + P + T+ + GY G+++ A V + +G
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P Y L+ G K L ++ E+ G+ P TYG +I +C +A
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLL-------------------- 352
+M+++ + +C K+ + L K+++AC L ++++
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 353 ------------------RKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGS--IP 392
+K +P+N + + I LCK GK+ +A+KLF + IP
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 393 SLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRIL 452
TY LI G + ++ +A L D+M KG+ PN+ TYN LI+G CK+GN R+L
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 453 EEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
++ KG PN +++ LI+GL +SGN E ++ G V
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 10/433 (2%)
Query: 47 LVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ 106
+V+ R N+D A+ +F + N TY+S+I+ A VE + L+
Sbjct: 231 VVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYA---MIGDVEGMTRVLRL 286
Query: 107 NPEIKCGENL--FITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKR 164
E N+ + ++I+ Y G E A F +++ + L++ + +
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 165 Y-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTH 223
D V + ++ + V N CN LI CK + A ++ M + P+ T+
Sbjct: 347 IRDAVRV--HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 224 TTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMED 283
T++ GY G ++ A ++ + + VP TY +L+ GY ++G D + + M
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 284 NGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVED 343
GV +E++ ++EA K EA L +++L R + + +I LC+ KV +
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 344 ACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIA 402
A E+ + C P + H K G + EA + + ER G P++ YNTLI+
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462
G + L + L ++ +G+ P V TY LI G+C IG + EM++KG
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 463 NKTSFSLLIEGLY 475
N S + L+
Sbjct: 645 NVNICSKIANSLF 657
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 173 KNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL-DEMPSMGMVPNLVTHTTILGGYV 231
+NS K +VPN N+ I LCK +E A ++ D + S +P+ T+T ++ G
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 232 WRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEV 291
GDI A + ++ +G +P+ TY L+ G KLG + A +++ ++ G+ PN +
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 292 TYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSS 325
TY +I+ K EA L + M+++ V S
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 201/416 (48%), Gaps = 18/416 (4%)
Query: 66 YAGKFHPNFSHNYDTYHSIIH------KLARARAFDAVESLLTELKQNPEIKCGENLFIT 119
YA + N T++ +I+ KL +A+ F + + IK + T
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG-------IKPTIVTYNT 265
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
+++ + L GR E A ++ Q +++ N +L+ + R V K +
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMK----EI 321
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
+VP+ + NILI+ D+E A DEM GMVP T+ T++ G IE A
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ + +I ++G V D+ TY +L++GY + G A + DEM +G++P + TY +I
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
C+ K+ EA L + ++ + P + ++D C G ++ A L K + + PD
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Query: 360 NAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWD 418
+ + ++ LC EGK EA++L E +R I P ++YNTLI+G + + A + D
Sbjct: 502 DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD 561
Query: 419 DMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
+M+ G P + TYN L++G K + +L EM +G PN +SF +IE +
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 199/384 (51%), Gaps = 10/384 (2%)
Query: 135 KTFLRI-EKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
K FL I E F ++ ++ + NTL+ R + L+ + K P++ T N ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK-GFQPDMQTYNPILS 303
Query: 194 ALCKKDDVEG-AIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252
+C EG A VL EM +G+VP+ V++ ++ G GD+E A +++ +G V
Sbjct: 304 WMCN----EGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312
P TY L+ G ++ A ++ E+ + G+ + VTY ++I +C+ + +A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCK 372
D+M+ P+ +I +LC + K +A EL+++++ K PD + +T++ C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 373 EGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFT 431
G + A L E + SI P +TYN L+ G+C + EA L +M +G++P+ +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 432 YNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG-KVVSMA 490
YN LI G+ K G+ K + +EML G P +++ L++GL ++ EGE+ +++
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN-QEGELAEELLREM 598
Query: 491 TASGSVESDSWNFLLTRIVSDLDS 514
+ G V +DS + +S+LD+
Sbjct: 599 KSEGIVPNDSSFCSVIEAMSNLDA 622
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 172/339 (50%), Gaps = 7/339 (2%)
Query: 171 MFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGY 230
+F ++ ++ NV+T NI+I LCK+ ++ A L M G+ P +VT+ T++ G+
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 231 VWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNE 290
RG IE A+ + ++ +G+ PD TY ++ GR A +V+ EM++ G+ P+
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDS 327
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
V+Y ++I A D+M+++ VP+ +I L E K+E A L +
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAE 409
+ K + D+ + +I+ C+ G +A L DE I P+ TY +LI +C +
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
EA L++ +V KG++P++ N L+ G C IGN +L+EM P+ +++
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 470 LIEGLYESGNEGEVGKVVSMATASGSVESD--SWNFLLT 506
L+ GL G E +++ G ++ D S+N L++
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRG-IKPDHISYNTLIS 545
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 291 VTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKR 350
+ + +++ C+ + EA M ++ + P + C ++ LL ++E+A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 351 LLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAE 409
+ R + + +I+ LCKEGK+ +AK E I P+++TYNTL+ G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 410 LTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSL 469
+ A + +M KG +P++ TYN ++ C G A E +L EM + G P+ S+++
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNI 332
Query: 470 LIEGLYESGN 479
LI G +G+
Sbjct: 333 LIRGCSNNGD 342
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 200/380 (52%), Gaps = 8/380 (2%)
Query: 1 MLRHLHQKITAPSCLLQSIGGARCSLSTITVTPPIKPWPQRLYPKRLVSMIFRQQNLDLA 60
+ RHL ++ S L + I V+ P P P R+ +I Q + LA
Sbjct: 12 VFRHLTSPLSTSSRFLFYSSSEHEARKPI-VSNPKSPIGS---PTRVQKLIASQSDPLLA 67
Query: 61 LQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITV 120
+IF YA + PNF H+ ++ +I KL R R F+ ++ +L + + + GE +F +
Sbjct: 68 KEIFDYASQ-QPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGE-IFTYL 125
Query: 121 IRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRY-DLVHLMFKNSRHKF 179
I+ Y A PE + TF ++ +FN + LN +L+ LV ++ Y +FK+SR
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH- 184
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENA 239
V+PN + N+L++A C DD+ A ++ +M +VP++ ++ ++ G+ +G + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 240 KRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEA 299
+ D+L++G+VPD +YT L++ + +L +A K++ M+ G P+ V Y MI
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 300 FCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPD 359
FC+ ++ +AR +LDDML P+S +I LC++G ++ + + ++ K P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 360 NAISSTIIHWLCKEGKIWEA 379
++S+ ++ C GK+ EA
Sbjct: 365 FSVSNCLVKGFCSFGKVEEA 384
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 3/281 (1%)
Query: 237 ENAKRVFGDILDRGWVPDATTYTVLMDGYIK-LGRLTDAVKVMDEMEDNGVEPNEVTYGV 295
E F +L+ + P ++D + G L A ++ +GV PN +Y +
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 296 MIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKN 355
+++AFC A L ML+R VP +I C +G+V A EL +L K
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 356 CMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAG 414
+PD +T+++ LC++ ++ EA KL + +G P L+ YNT+I G C +A
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 415 RLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
++ DDM+ G PN +Y LI G C G EG + LEEM+ KG P+ + + L++G
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 475 YESGNEGEVGKVVSMATASG-SVESDSWNFLLTRIVSDLDS 514
G E VV + +G ++ SD+W ++ I ++ +S
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 416
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 200/403 (49%), Gaps = 11/403 (2%)
Query: 81 YHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRI 140
++ + +A+ + ++ V +L +++ L I +I + + A T +I
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI-MINCFCRCRKLSYAFSTMGKI 149
Query: 141 EKFNVQRSVRSLNTLLNALVQNKR----YDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
K + NTLLN L R +LV M + HK P + T N L+ LC
Sbjct: 150 MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG-HK----PTLITLNTLVNGLC 204
Query: 197 KKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDAT 256
V A+ ++D M G PN VT+ +L G A + + +R DA
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316
Y++++DG K G L +A + +EME G + + +TY +I FC + + LL DM
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 317 LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKI 376
++RK P+ +ID +EGK+ +A +L K ++++ P+ +++I CKE ++
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 377 WEAKKLFD-EFERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNML 435
EA ++ D +G P ++T+N LI G C++ + + L+ +M +GV N TYN L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 436 IQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
+QGFC+ G + ++ +EM+ + P+ S+ +L++GL ++G
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 197/406 (48%), Gaps = 4/406 (0%)
Query: 74 FSHNYDTYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELA 133
F N TY +++ + ++ LL ++++ IK + +I G + A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 134 VKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIK 193
F +E + + + NTL+ R+D + ++ K K+ PNV T ++LI
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD-MIKRKISPNVVTFSVLID 341
Query: 194 ALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP 253
+ K+ + A ++L EM G+ PN +T+ +++ G+ +E A ++ ++ +G P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 254 DATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLL 313
D T+ +L++GY K R+ D +++ EM GV N VTY +++ FC+ K A+ L
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 314 DDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKE 373
+M+ R+ P ++D LC+ G++E A E++ ++ + D I IIH +C
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 374 GKIWEAKKLFDEFE-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTY 432
K+ +A LF +G YN +I+ +C L++A L+ M E+G P+ TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 433 NMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
N+LI+ +A ++EEM G FP S ++ + SG
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSG 626
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 180/349 (51%), Gaps = 3/349 (0%)
Query: 147 RSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIR 206
R++ + L + LV K D V L F++ + +P V N L A+ K E +
Sbjct: 52 RNLSYRDKLSSGLVGIKADDAVDL-FRDMIQS-RPLPTVIDFNRLFSAIAKTKQYELVLA 109
Query: 207 VLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYI 266
+ +M S G+ ++ T + ++ + + A G I+ G+ PD + L++G
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 267 KLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSA 326
R+++A++++D M + G +P +T ++ C K +A L+D M++ + P+
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 327 LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386
V++++C+ G+ A EL +++ +N D S II LCK+G + A LF+E
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 387 E-RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNA 445
E +G ++TYNTLI G C + + +L DM+++ + PNV T+++LI F K G
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 446 KEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASG 494
+E ++L+EM+ +G PN +++ LI+G + E ++V + + G
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 189/370 (51%), Gaps = 4/370 (1%)
Query: 127 AGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHK-FKVVPNV 185
+G+ LA++ ++E+ N++ + +++ L ++ D +F K FK ++
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADI 298
Query: 186 FTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGD 245
T N LI C + ++L +M + PN+VT + ++ +V G + A ++ +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 246 ILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKK 305
++ RG P+ TY L+DG+ K RL +A++++D M G +P+ +T+ ++I +CK +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 306 SGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISST 365
+ L +M R + ++ ++ C+ GK+E A +L++ ++ + PD
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 366 IIHWLCKEGKIWEAKKLFDEFERGSIP-SLLTYNTLIAGMCESAELTEAGRLWDDMVEKG 424
++ LC G++ +A ++F + E+ + + Y +I GMC ++++ +A L+ + KG
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 425 VEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG 484
V+ + YN++I C+ + + + +M ++G P++ ++++LI +
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 485 KVVSMATASG 494
+++ +SG
Sbjct: 599 ELIEEMKSSG 608
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 4/226 (1%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLR 139
T++ +I+ +A D L E+ I + T+++ + +G+ E+A K F
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 140 IEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMF-KNSRHKFKVVPNVFTCNILIKALCKK 198
+ V+ + S LL+ L N + +F K + K ++ ++ I+I +C
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM--IIIHGMCNA 521
Query: 199 DDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTY 258
V+ A + +P G+ + + ++ + + A +F + + G PD TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 259 TVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGK 304
+L+ ++ T A ++++EM+ +G + T ++I G+
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 217/460 (47%), Gaps = 69/460 (15%)
Query: 80 TYHSIIHKLARARAFDAVESLLTELKQNPEIKCGENLFI--TVIRNYGLAGRPELAVKTF 137
T++ +I L + DA L E+ PE C N F ++R Y AG + ++
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEM---PEKGCKPNEFTFGILVRGYCKAGLTDKGLELL 205
Query: 138 LRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCK 197
+E F V + NT++++ + R D M + R + +VP++ T N I ALCK
Sbjct: 206 NAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE-GLVPDIVTFNSRISALCK 264
Query: 198 KDDVEGAIRVLDEM---PSMGMV-PNLVTHTTILGGYVWRGDIENAKRVFGDI------- 246
+ V A R+ +M +G+ PN +T+ +L G+ G +E+AK +F I
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 247 ----------------------------LDRGWVPDATTYTVLMDGYIKLGRLTDAVKVM 278
D+G P +Y +LMDG KLG L+DA ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 279 DEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEE 338
M+ NGV P+ VTYG ++ +C K A++LL +M++ +P++ C ++ L +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 339 GKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKK----------------- 381
G++ +A EL +++ K D + I+ LC G++ +A +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 382 -----LFDE--FERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434
L D+ E +P L+TY+TL+ G+C++ EA L+ +M+ + ++P+ YN+
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGL 474
I FCK G R+L++M KGC + +++ LI GL
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 174/342 (50%), Gaps = 7/342 (2%)
Query: 144 NVQRS-VRSLNTLLNALVQNKRYDLVHLMFKNSRHKF-KVVPNVFTCNILIKALCKKDDV 201
++Q++ + SL ++++ ++ D F+ R +F + P+V+ N+L+++ K+ V
Sbjct: 69 SIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRV 128
Query: 202 EGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVL 261
E + +M G+ P T ++ ++ A+ +F ++ ++G P+ T+ +L
Sbjct: 129 EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGIL 188
Query: 262 MDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKY 321
+ GY K G +++++ ME GV PN+V Y ++ +FC+ ++ ++ +++ M +
Sbjct: 189 VRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Query: 322 VPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCM----PDNAISSTIIHWLCKEGKIW 377
VP I LC+EGKV DA ++ + + P++ + ++ CK G +
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 378 EAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLI 436
+AK LF+ E + SL +YN + G+ + EA + M +KG+ P++++YN+L+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 437 QGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESG 478
G CK+G + I+ M G P+ ++ L+ G G
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 183/404 (45%), Gaps = 38/404 (9%)
Query: 120 VIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKF 179
++ Y G+ + A + + N + + N LL++L + R + + K
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 180 KVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGM----------------------- 216
+ V TCNI++ LC +++ AI ++ M G
Sbjct: 462 YGLDTV-TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 217 VPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVK 276
+P+L+T++T+L G G AK +F +++ PD+ Y + + + K G+++ A +
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V+ +ME G + TY +I + E L+D+M ++ P+ I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-----ERGSI 391
E KVEDA L +++KN P+ +I CK A+++F+ ++ +
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 392 PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRI 451
SL+ +N L+A + +L +A L + ++++G E F Y L++ CK + I
Sbjct: 701 YSLM-FNELLA----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 452 LEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVG----KVVSMAT 491
L +M+D+G + + +I+GL + GN+ E K++ MA+
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 389 GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEG 448
G P T+N LI +C+S+ + A L+D+M EKG +PN FT+ +L++G+CK G +G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 449 IRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV 496
+ +L M G PNK ++ ++ G + K+V G V
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV 249
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 323 PSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKL 382
PS L +++ +E +VE L+K ++ P + +I LC + A++L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 383 FDEF-ERGSIPSLLTYNTLIAGMCESAELTEAG-RLWDDMVEKGVEPNVFTYNMLIQGFC 440
FDE E+G P+ T+ L+ G C+ A LT+ G L + M GV PN YN ++ FC
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCK-AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 441 KIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
+ G + +++E+M ++G P+ +F+ I L + G + ++ S
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 215/445 (48%), Gaps = 46/445 (10%)
Query: 80 TYHSIIHKLARARAFDAVESLLTE---LKQNPEIKCGENLFITVIRNYGLAGRPELAVKT 136
TY ++++ L + + F+ ++ E L+ +P E +++ G+ E A+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS----EAAVSSLVEGLRKRGKIEEALNL 354
Query: 137 FLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALC 196
R+ F V ++ N L+++L + +++ L+F + K + PN T +ILI C
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF-DRMGKIGLRPNDVTYSILIDMFC 413
Query: 197 KKDDVEGAIRVLDEMPSMGMV-----------------------------------PNLV 221
++ ++ A+ L EM G+ P +V
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 222 THTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEM 281
T+T+++GGY +G I A R++ ++ +G P T+T L+ G + G + DAVK+ +EM
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 282 EDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKV 341
+ V+PN VTY VMIE +C+ +A L +M ++ VP + +I LC G+
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 342 EDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTL 400
+A L + NC + + ++H C+EGK+ EA + E +RG L+ Y L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 401 IAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGC 460
I G + + L +M ++G++P+ Y +I K G+ KE I + M+++GC
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 461 FPNKTSFSLLIEGLYESG--NEGEV 483
PN+ +++ +I GL ++G NE EV
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEV 738
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 228/497 (45%), Gaps = 54/497 (10%)
Query: 59 LALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVESLLTELKQ---------NPE 109
L L+ F++ G H F H+ ++ +IH L +A F SLL L N
Sbjct: 86 LGLRFFNFLG-LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVL 144
Query: 110 IKCGEN-------LFITVIRNYGLAGRPELAVKTF-LRIEKFNVQRSVRSLNTLLNALVQ 161
C E F +I++Y + R V F + I K ++ VR+L+ LL+ LV+
Sbjct: 145 FSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVK 204
Query: 162 NKRYDLVHLMFKN--------------------------SRHKFKVVP--------NVFT 187
+ + L +F + SR K + N+
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 188 CNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDIL 247
N+LI LCKK V A+ + ++ + P++VT+ T++ G + E + ++L
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 248 DRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSG 307
+ P + L++G K G++ +A+ ++ + D GV PN Y +I++ CKG+K
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 308 EARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTII 367
EA L D M + P+ +ID+ C GK++ A ++ +++I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 368 HWLCKEGKIWEAKKLFDEFERGSI-PSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVE 426
+ CK G I A+ E + P+++TY +L+ G C ++ +A RL+ +M KG+
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 427 PNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKV 486
P+++T+ L+ G + G ++ +++ EM + PN+ +++++IEG E G+ + +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 487 VSMATASGSVESDSWNF 503
+ T G V D++++
Sbjct: 565 LKEMTEKGIV-PDTYSY 580
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 211/482 (43%), Gaps = 44/482 (9%)
Query: 39 PQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLARARAFDAVE 98
P + L+ M R+ LD AL + Y+S+I+ + A E
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFL--GEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 99 SLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFNVQRSVRSLNTLLNA 158
+ E+ N +++ + +++ Y G+ A++ + + + S+ + TLL+
Sbjct: 458 GFMAEM-INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 159 LVQNKRY-DLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMV 217
L + D V L N ++ V PN T N++I+ C++ D+ A L EM G+V
Sbjct: 517 LFRAGLIRDAVKLF--NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVP-DATTYTVLMDGYIKLGRLTDAVK 276
P+ ++ ++ G G AK VF D L +G + YT L+ G+ + G+L +A+
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 277 VMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLC 336
V EM GV+ + V YGV+I+ K K LL +M R P + +ID
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 337 EEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFE--------- 387
+ G ++A +W ++ + C+P+ + +I+ LCK G + EA+ L + +
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 388 ---------------------------RGSIPSLLTYNTLIAGMCESAELTEAGRLWDDM 420
+G + + TYN LI G C + EA L M
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRM 813
Query: 421 VEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNE 480
+ GV P+ TY +I C+ + K+ I + M +KG P++ +++ LI G +G
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 481 GE 482
G+
Sbjct: 874 GK 875
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 190 ILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDR 249
+LI K D + +L EM G+ P+ V +T+++ GD + A ++ +++
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 250 GWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEA 309
G VP+ TYT +++G K G + +A + +M+ PN+VTYG ++ KG+ +
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK 771
Query: 310 RNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHW 369
L + + + + ++A +I C +G++E+A EL R++ PD +T+I+
Sbjct: 772 AVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 370 LCKEGKIWEAKKLFDEF-ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPN 428
LC+ + +A +L++ E+G P + YNTLI G C + E+ +A L ++M+ +G+ PN
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241
VPN T +I LCK V A + +M + VPN VT+ L + +G+++ K
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKA 772
Query: 242 V-FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAF 300
V + + +G + + TY +L+ G+ + GR+ +A +++ M +GV P+ +TY MI
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 301 CKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDN 360
C+ +A L + M ++ P +I C G++ A EL +LR+ +P+N
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Query: 361 AISST 365
S T
Sbjct: 893 KTSRT 897
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 181 VVPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAK 240
++ N T N+LI+ C++ +E A ++ M G+ P+ +T+TT++ R D++ A
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 241 RVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVT 292
++ + ++G PD Y L+ G G + A ++ +EM G+ PN T
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,795,062
Number of Sequences: 539616
Number of extensions: 8320072
Number of successful extensions: 29393
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 19650
Number of HSP's gapped (non-prelim): 2759
length of query: 527
length of database: 191,569,459
effective HSP length: 122
effective length of query: 405
effective length of database: 125,736,307
effective search space: 50923204335
effective search space used: 50923204335
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)