Query 043288
Match_columns 156
No_of_seqs 145 out of 1277
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 05:19:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 6.4E-35 2.2E-39 212.8 12.3 145 1-156 1-151 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 4.1E-31 1.4E-35 194.4 12.6 104 49-155 57-161 (161)
3 3gla_A Low molecular weight he 100.0 3.2E-29 1.1E-33 170.6 14.3 98 46-144 2-99 (100)
4 4fei_A Heat shock protein-rela 100.0 1.2E-27 4E-32 163.6 12.0 95 45-145 3-97 (102)
5 3aab_A Putative uncharacterize 99.9 2.2E-27 7.4E-32 167.3 9.8 96 46-145 22-118 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 2.2E-25 7.5E-30 153.4 13.4 99 49-155 3-105 (106)
7 2wj5_A Heat shock protein beta 99.9 4E-25 1.4E-29 150.8 11.6 97 50-154 3-100 (101)
8 2klr_A Alpha-crystallin B chai 99.9 2.7E-25 9.2E-30 165.3 10.4 97 50-155 65-162 (175)
9 3q9p_A Heat shock protein beta 99.9 1.9E-23 6.5E-28 138.3 11.3 82 53-142 2-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 8.4E-23 2.9E-27 136.5 11.6 85 55-147 3-88 (90)
11 2bol_A TSP36, small heat shock 99.9 1E-21 3.5E-26 157.7 11.4 91 47-146 97-192 (314)
12 2bol_A TSP36, small heat shock 99.8 5.7E-21 1.9E-25 153.4 9.5 89 49-142 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.1 3.4E-10 1.2E-14 77.8 8.9 81 48-144 9-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.1 3.6E-10 1.2E-14 74.6 8.4 81 48-144 2-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.7 7.3E-08 2.5E-12 68.0 7.4 77 48-145 3-84 (134)
16 3eud_A Protein SHQ1; CS domain 98.7 4.2E-07 1.4E-11 62.2 10.9 80 46-146 15-99 (115)
17 3igf_A ALL4481 protein; two-do 98.3 2.1E-06 7.3E-11 70.2 8.8 72 49-143 298-370 (374)
18 1x5m_A Calcyclin-binding prote 98.1 7.8E-05 2.7E-09 51.9 11.5 81 48-144 20-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.0 6.1E-05 2.1E-09 53.1 10.1 88 48-144 19-112 (134)
20 1wgv_A KIAA1068 protein; CS do 98.0 0.00016 5.5E-09 50.0 11.2 85 44-144 15-102 (124)
21 3qor_A Nuclear migration prote 97.8 0.00035 1.2E-08 48.2 11.1 86 40-144 8-97 (121)
22 1ejf_A Progesterone receptor P 97.8 0.00018 6.2E-09 49.9 9.2 79 49-144 4-82 (125)
23 1wfi_A Nuclear distribution ge 97.7 0.00036 1.2E-08 48.7 9.1 79 47-144 6-88 (131)
24 2o30_A Nuclear movement protei 97.6 0.00084 2.9E-08 46.8 9.9 76 48-143 4-80 (131)
25 2kmw_A Uncharacterized protein 97.5 0.00032 1.1E-08 50.3 7.0 78 48-144 4-82 (150)
26 2rh0_A NUDC domain-containing 97.3 0.0038 1.3E-07 44.9 10.9 78 47-144 12-91 (157)
27 2cg9_X CO-chaperone protein SB 97.3 0.00013 4.6E-09 51.2 3.0 84 48-143 6-97 (134)
28 4fei_A Heat shock protein-rela 85.2 4.7 0.00016 26.0 7.2 33 60-93 63-96 (102)
29 3q9p_A Heat shock protein beta 85.1 2.2 7.6E-05 26.8 5.4 33 110-143 8-40 (85)
30 3gla_A Low molecular weight he 80.6 3.6 0.00012 26.3 5.1 32 59-91 65-97 (100)
31 2y1y_A Alpha-crystallin B chai 77.6 4.9 0.00017 25.3 5.0 33 110-143 7-39 (90)
32 4eld_A MJ16.5-P1, small heat s 76.8 9.2 0.00032 26.7 6.8 32 111-143 68-99 (161)
33 3l1e_A Alpha-crystallin A chai 76.3 5.2 0.00018 26.1 5.0 32 110-142 13-44 (106)
34 2wj5_A Heat shock protein beta 73.6 6.6 0.00023 25.3 4.9 33 110-143 12-44 (101)
35 3aab_A Putative uncharacterize 73.6 8.7 0.0003 25.6 5.7 33 111-144 36-69 (123)
36 1gme_A Heat shock protein 16.9 72.5 7.9 0.00027 26.9 5.4 34 59-93 105-139 (151)
37 2nwt_A UPF0165 protein AF_2212 64.0 6.1 0.00021 24.2 2.9 15 124-138 3-17 (69)
38 2klr_A Alpha-crystallin B chai 59.8 12 0.00042 26.7 4.4 33 110-143 74-106 (175)
39 2cql_A OK/SW-CL.103, 60S ribos 56.8 21 0.00071 23.2 4.7 19 71-90 20-38 (100)
40 1rl6_A Protein (ribosomal prot 56.4 20 0.00068 25.8 5.0 46 71-142 11-56 (177)
41 1nkw_E 50S ribosomal protein L 52.8 40 0.0014 25.0 6.2 46 71-142 39-84 (212)
42 3j21_F 50S ribosomal protein L 48.0 35 0.0012 24.7 5.2 45 71-140 14-58 (184)
43 1vq8_E 50S ribosomal protein L 47.9 41 0.0014 24.2 5.5 47 71-142 9-55 (178)
44 2o30_A Nuclear movement protei 39.0 44 0.0015 22.3 4.4 30 110-139 15-44 (131)
45 3v2d_H 50S ribosomal protein L 38.3 72 0.0025 22.9 5.6 44 71-140 12-55 (180)
46 1ew4_A CYAY protein; friedreic 36.8 19 0.00066 23.6 2.1 17 125-141 29-45 (106)
47 3iz5_F 60S ribosomal protein L 35.5 1E+02 0.0035 22.3 6.1 46 71-141 13-60 (190)
48 4awd_A Beta-porphyranase; hydr 34.3 78 0.0027 24.8 5.6 48 70-120 85-145 (324)
49 2hbp_A Cytoskeleton assembly c 33.6 26 0.00088 21.3 2.1 36 51-86 6-41 (68)
50 3u5e_H L8, RP24, YL11, 60S rib 33.0 1.1E+02 0.0038 22.1 5.9 46 71-141 13-59 (191)
51 2ks0_A Uncharacterized protein 32.5 29 0.00099 21.2 2.3 22 68-90 17-38 (71)
52 2kgs_A Uncharacterized protein 31.9 33 0.0011 23.1 2.8 26 66-92 2-27 (132)
53 3qqz_A Putative uncharacterize 31.1 1.6E+02 0.0056 21.9 8.1 64 65-137 21-85 (255)
54 1wgv_A KIAA1068 protein; CS do 31.0 69 0.0024 21.1 4.2 31 110-140 30-61 (124)
55 3oeq_A Frataxin homolog, mitoc 30.3 38 0.0013 22.9 2.8 16 126-141 49-64 (123)
56 1n91_A ORF, hypothetical prote 29.8 1.1E+02 0.0037 20.1 4.9 37 53-91 8-45 (108)
57 2rh0_A NUDC domain-containing 28.8 74 0.0025 22.0 4.2 31 110-140 24-54 (157)
58 4gzv_A Hypothetical protein; A 28.1 1.5E+02 0.0051 20.5 7.9 74 46-139 33-108 (142)
59 3iln_A Laminarinase; jelly ROW 27.7 81 0.0028 23.4 4.6 44 76-120 49-97 (251)
60 3jx8_A Putative lipoprotein; s 25.9 75 0.0026 23.5 4.1 40 50-90 33-72 (250)
61 2zkr_e 60S ribosomal protein L 25.7 98 0.0033 22.4 4.5 53 65-142 7-62 (192)
62 3bbo_I Ribosomal protein L6; l 25.5 30 0.001 25.9 1.7 47 71-142 54-100 (223)
63 1ulv_A Glucodextranase; GH fam 24.3 1.1E+02 0.0037 27.9 5.4 96 44-143 804-915 (1020)
64 2uwa_A Cellulase; glycoside hy 24.2 1.4E+02 0.0048 22.6 5.4 43 70-120 31-74 (274)
65 3qor_A Nuclear migration prote 24.2 1.2E+02 0.0041 19.8 4.5 31 110-140 27-59 (121)
66 3azy_A Laminarinase; beta-jell 24.1 2.2E+02 0.0077 21.1 6.9 44 76-120 56-108 (272)
67 3r8s_G 50S ribosomal protein L 23.8 30 0.001 24.8 1.4 43 71-139 11-53 (176)
68 3t3l_A Frataxin, mitochondrial 23.7 49 0.0017 22.5 2.4 17 124-140 40-56 (129)
69 2hyk_A Beta-1,3-glucanase; fam 23.4 80 0.0027 23.2 3.8 14 107-120 86-99 (245)
70 1wfi_A Nuclear distribution ge 22.1 1.2E+02 0.004 20.0 4.1 29 111-139 19-49 (131)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=100.00 E-value=6.4e-35 Score=212.78 Aligned_cols=145 Identities=61% Similarity=1.080 Sum_probs=122.2
Q ss_pred CCccccccCCCCCCCCCCCCCCcc-CccCCC-----CCCCCCCCCCCCCcccccceeEEEECCCeEEEEEEcCCCCCCCe
Q 043288 1 MAMIPSFFGNQRDSILDPFSFDVW-NPFKDF-----AFPSLSSRFPRETSAIVNTRMDWKETPEAHVFKVDLPGLTKEDV 74 (156)
Q Consensus 1 m~~~p~~~~~~~~~~~~pf~~~~~-d~~~~~-----~~~~~~~~~~~~~~~~~~p~~di~e~~~~~~i~~~lPG~~~edi 74 (156)
||+++ +.+.|+||+ ++| |+|..| ++... ++.....+.|++||+|++++|+|.++|||+++++|
T Consensus 1 ms~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~di~e~~d~~~v~~dlPGv~kedI 69 (151)
T 1gme_A 1 MSIVR------RSNVFDPFA-DLWADPFDTFRSIVPAISGG----GSETAAFANARMDWKETPEAHVFKADLPGVKKEEV 69 (151)
T ss_dssp -CCCC------SCCCBCTTC-GGGSSHHHHHHHHGGGTTSS----CCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGGE
T ss_pred Ccccc------cccccCchH-hhhhchhhhhhhhccccccc----ccccccccCCceEEEEcCCEEEEEEECCCCChHHE
Confidence 78773 257899998 888 776433 11111 23445567899999999999999999999999999
Q ss_pred EEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEEeccCCCCCCeeEEec
Q 043288 75 KLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPKEEVKKPELKAIEI 154 (156)
Q Consensus 75 ~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I 154 (156)
+|++.+|+.|+|+|++..+.+.++.+|+++||.+|.|.|+|.||.+||.++|+|+|+||+|+|++||..++.++.++|+|
T Consensus 70 ~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I 149 (151)
T 1gme_A 70 KVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQI 149 (151)
T ss_dssp EEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCCCTTCCCCCCC
T ss_pred EEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccCcCCCCCeEeee
Confidence 99996446999999998877667789999999999999999999999999999999999999999999877777799999
Q ss_pred CC
Q 043288 155 SG 156 (156)
Q Consensus 155 ~~ 156 (156)
+|
T Consensus 150 ~~ 151 (151)
T 1gme_A 150 SG 151 (151)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.97 E-value=4.1e-31 Score=194.41 Aligned_cols=104 Identities=29% Similarity=0.346 Sum_probs=95.5
Q ss_pred ceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEee-eceEEEEEEECCCCCccCceE
Q 043288 49 TRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVER-SRGKFLRRFRLPENGKIDQVR 127 (156)
Q Consensus 49 p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~-~~~~f~r~i~lP~~vd~~~i~ 127 (156)
+++||+|++++|+|.++|||++++||+|++++ +.|+|+|++..+...++.+|+++|| .+|.|.|+|.||.+||.++|+
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence 45999999999999999999999999999998 5999999998866666778999999 999999999999999999999
Q ss_pred EEEeCCEEEEEEeccCCCCCCeeEEecC
Q 043288 128 ASIEDGVLTVTVPKEEVKKPELKAIEIS 155 (156)
Q Consensus 128 A~~~nGvL~I~lPK~~~~~~~~~~I~I~ 155 (156)
|+|+||+|+|++||.+.++ .++|+|+
T Consensus 136 A~~~nGvL~I~lpK~~~~~--~r~I~Ie 161 (161)
T 4eld_A 136 AKFENGVLSVILPKAESSI--KKGINIE 161 (161)
T ss_dssp EEEETTEEEEEEEBCGGGS--CCCCCCC
T ss_pred EEEECCEEEEEEEcCCCCC--CcEeecC
Confidence 9999999999999987654 4888886
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=3.2e-29 Score=170.59 Aligned_cols=98 Identities=32% Similarity=0.601 Sum_probs=91.4
Q ss_pred cccceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCc
Q 043288 46 IVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQ 125 (156)
Q Consensus 46 ~~~p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~ 125 (156)
.|.|++||+|++++|+|.++|||+++++|+|++++ +.|+|+|++..+...+...|+++||.+|.|.|+|.||.+||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 46799999999999999999999999999999997 59999999988777777899999999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeccCC
Q 043288 126 VRASIEDGVLTVTVPKEEV 144 (156)
Q Consensus 126 i~A~~~nGvL~I~lPK~~~ 144 (156)
|+|+|+||+|+|++||.++
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999864
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=1.2e-27 Score=163.63 Aligned_cols=95 Identities=26% Similarity=0.416 Sum_probs=88.0
Q ss_pred ccccceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccC
Q 043288 45 AIVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKID 124 (156)
Q Consensus 45 ~~~~p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~ 124 (156)
+.+.|++||+|++++|+|.++|||+++++|+|++++ +.|+|+|++.. ..+|+++||.+|.|.|+|.||..||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~ 76 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPA 76 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTT
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchh
Confidence 556799999999999999999999999999999997 59999999853 357889999999999999999999999
Q ss_pred ceEEEEeCCEEEEEEeccCCC
Q 043288 125 QVRASIEDGVLTVTVPKEEVK 145 (156)
Q Consensus 125 ~i~A~~~nGvL~I~lPK~~~~ 145 (156)
+|+|+|+||+|+|++||..+.
T Consensus 77 ~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 77 SGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp CCEEEEETTEEEEEEEBSSCC
T ss_pred HcEEEEECCEEEEEEEccCcc
Confidence 999999999999999998754
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=2.2e-27 Score=167.31 Aligned_cols=96 Identities=27% Similarity=0.364 Sum_probs=87.8
Q ss_pred cccceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCc
Q 043288 46 IVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQ 125 (156)
Q Consensus 46 ~~~p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~ 125 (156)
.+.|++||+|++++|+|.++|||+++++|+|++.+++.|+|+|++..+. +.+|+++||.+ .|.|+|.||.+||.++
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~ 97 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDA 97 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTC
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcch
Confidence 3469999999999999999999999999999999724999999987654 57899999999 9999999999999999
Q ss_pred e-EEEEeCCEEEEEEeccCCC
Q 043288 126 V-RASIEDGVLTVTVPKEEVK 145 (156)
Q Consensus 126 i-~A~~~nGvL~I~lPK~~~~ 145 (156)
| +|.|+||+|+|++||...+
T Consensus 98 i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 98 EISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp CCEEEEETTEEEEEEEGGGEE
T ss_pred hCeeEEcCCEEEEEEEcCCCC
Confidence 9 9999999999999998753
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=2.2e-25 Score=153.38 Aligned_cols=99 Identities=24% Similarity=0.421 Sum_probs=85.7
Q ss_pred ceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEE
Q 043288 49 TRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRA 128 (156)
Q Consensus 49 p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A 128 (156)
...+|+|++++|+|.++|||++++||+|++++ +.|+|+|++..... ...|+++| |.|+|.||.+||.++|+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~~e-----F~R~~~LP~~vd~~~i~A 74 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQD--DHGYISRE-----FHRRYRLPSNVDQSALSC 74 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEET--TTEEEEEE-----EEEEEECCTTBCTTSCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccC--CCCEEEEE-----EEEEEECCCCcChhHcEE
Confidence 34799999999999999999999999999998 59999999765432 34565544 999999999999999999
Q ss_pred EE-eCCEEEEEEeccCCCC---CCeeEEecC
Q 043288 129 SI-EDGVLTVTVPKEEVKK---PELKAIEIS 155 (156)
Q Consensus 129 ~~-~nGvL~I~lPK~~~~~---~~~~~I~I~ 155 (156)
.| +||+|+|++||..+.. .+.|+|+|+
T Consensus 75 ~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 75 SLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 99 8999999999998753 467999986
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=4e-25 Score=150.83 Aligned_cols=97 Identities=15% Similarity=0.277 Sum_probs=82.5
Q ss_pred eeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEE
Q 043288 50 RMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRAS 129 (156)
Q Consensus 50 ~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~ 129 (156)
.+||+|++++|+|.++|||++++||+|++.+ +.|+|+|++..+. ++..|+++| |.|+|.||.+||.++|+|.
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence 4799999999999999999999999999997 5999999987643 334566665 9999999999999999999
Q ss_pred E-eCCEEEEEEeccCCCCCCeeEEec
Q 043288 130 I-EDGVLTVTVPKEEVKKPELKAIEI 154 (156)
Q Consensus 130 ~-~nGvL~I~lPK~~~~~~~~~~I~I 154 (156)
| +||+|+|++||....++++.+|.+
T Consensus 75 ~s~nGvL~I~lPK~~~~~~~~~~i~~ 100 (101)
T 2wj5_A 75 LSPEGVLSIQATPASAQASLPSPPAA 100 (101)
T ss_dssp ECTTSEEEEEECBCCCCCSSCC----
T ss_pred ECCCCEEEEEEECCCcCCCCCCcccc
Confidence 9 899999999999887776666543
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.92 E-value=2.7e-25 Score=165.32 Aligned_cols=97 Identities=21% Similarity=0.416 Sum_probs=73.4
Q ss_pred eeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEE
Q 043288 50 RMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRAS 129 (156)
Q Consensus 50 ~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~ 129 (156)
.+||+|++++|+|.++|||++++||+|++.+ +.|+|+|++..+. ++..|+++| |.|+|.||.+||.++|+|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~ 136 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSS 136 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEE--ETTEEEEEE-----EEEEEECTTTCCTTTCEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc--cCCceEEEE-----EEEEEECCCCcChhHeEEE
Confidence 3799999999999999999999999999998 5999999986643 234666655 9999999999999999999
Q ss_pred E-eCCEEEEEEeccCCCCCCeeEEecC
Q 043288 130 I-EDGVLTVTVPKEEVKKPELKAIEIS 155 (156)
Q Consensus 130 ~-~nGvL~I~lPK~~~~~~~~~~I~I~ 155 (156)
| +||+|+|++||...+. ..++|+|+
T Consensus 137 ~s~dGvL~I~lPK~~~~~-~~r~I~I~ 162 (175)
T 2klr_A 137 LSSDGVLTVNGPRKQVSG-PERTIPIT 162 (175)
T ss_dssp ECTTSCEEEEEECC-------------
T ss_pred EcCCCEEEEEEECCCCCC-CCeEEEEe
Confidence 9 7999999999986543 35889886
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.90 E-value=1.9e-23 Score=138.28 Aligned_cols=82 Identities=22% Similarity=0.394 Sum_probs=69.2
Q ss_pred EEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEe-
Q 043288 53 WKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIE- 131 (156)
Q Consensus 53 i~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~- 131 (156)
+.|++++|.|.++|||+++++|+|++.+ +.|+|+|++.....+ . +..+++|.|+|.||.+||.++|+|.|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~--~-----~~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQDE--H-----GYISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCC--C-----CEEEEEEEEEEECCCCcChHHcEEEECC
Confidence 4689999999999999999999999998 599999998765322 1 124678999999999999999999998
Q ss_pred CCEEEEEEecc
Q 043288 132 DGVLTVTVPKE 142 (156)
Q Consensus 132 nGvL~I~lPK~ 142 (156)
||+|+|++||.
T Consensus 74 ~GvL~I~lPK~ 84 (85)
T 3q9p_A 74 EGTLTVEAPMP 84 (85)
T ss_dssp TSEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999995
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=8.4e-23 Score=136.48 Aligned_cols=85 Identities=22% Similarity=0.467 Sum_probs=69.7
Q ss_pred ECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEE-eCC
Q 043288 55 ETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASI-EDG 133 (156)
Q Consensus 55 e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~-~nG 133 (156)
+++++|+|.++|||+++++|+|++.+ +.|+|+|++.... ++..|+++| |.|+|.||.+||.++|+|.| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE--CSSSEEEEE-----EEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHcEEEECCCC
Confidence 67899999999999999999999997 5999999987653 345676654 99999999999999999999 899
Q ss_pred EEEEEEeccCCCCC
Q 043288 134 VLTVTVPKEEVKKP 147 (156)
Q Consensus 134 vL~I~lPK~~~~~~ 147 (156)
+|+|++||...+.+
T Consensus 75 vL~I~~pK~~~~~p 88 (90)
T 2y1y_A 75 VLTVNGPRKQVSGP 88 (90)
T ss_dssp EEEEEECBC-----
T ss_pred EEEEEEEcCCCCCC
Confidence 99999999876554
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=1e-21 Score=157.71 Aligned_cols=91 Identities=19% Similarity=0.280 Sum_probs=81.9
Q ss_pred ccceeEEEECCC----eEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCc
Q 043288 47 VNTRMDWKETPE----AHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGK 122 (156)
Q Consensus 47 ~~p~~di~e~~~----~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd 122 (156)
+.|++||+|+++ +|+|.++|||+++++|+|++.+ +.|+|+|++..+.+. ++.+|.|.|+|.||.+||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~e~--------~r~~g~F~R~~~LP~~Vd 167 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVACGD--------AAMSESVGRSIPLPPSVD 167 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSSTTC--------CCBCCCEEEEEECCTTBC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccCCC--------CEEEEEEEEEEECCCCcc
Confidence 679999999999 9999999999999999999998 599999998754321 277899999999999999
Q ss_pred cCceEEEEe-CCEEEEEEeccCCCC
Q 043288 123 IDQVRASIE-DGVLTVTVPKEEVKK 146 (156)
Q Consensus 123 ~~~i~A~~~-nGvL~I~lPK~~~~~ 146 (156)
.++|+|+|+ ||+|+|++||..++.
T Consensus 168 ~e~i~A~~~~nGVL~I~lPK~~~~~ 192 (314)
T 2bol_A 168 RNHIQATITTDDVLVIEAPVNEPNY 192 (314)
T ss_dssp GGGCEEEECSSSEEEEEEEBSSCCT
T ss_pred ccccEEEEeCCCEEEEEEeccCccc
Confidence 999999999 999999999987653
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=5.7e-21 Score=153.40 Aligned_cols=89 Identities=18% Similarity=0.274 Sum_probs=70.7
Q ss_pred ceeEEEECC---CeEEEEEEc-CCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccC
Q 043288 49 TRMDWKETP---EAHVFKVDL-PGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKID 124 (156)
Q Consensus 49 p~~di~e~~---~~~~i~~~l-PG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~ 124 (156)
...+|.+++ ++|.|.++| ||++++||+|++++ +.|+|+|+++.+.+ .++++||.+|.|.|+|.||++||.+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~ 295 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDAS 295 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------CEEEEEEEECSSEECGG
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChH
Confidence 446777755 479999999 99999999999997 59999999876543 5788999999999999999999999
Q ss_pred ceEEEEeCCEEEEEEecc
Q 043288 125 QVRASIEDGVLTVTVPKE 142 (156)
Q Consensus 125 ~i~A~~~nGvL~I~lPK~ 142 (156)
+|+|+|+||||+|++||.
T Consensus 296 ~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 296 KTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp GCEEEEETTEEEEEEEEE
T ss_pred HeEEEEeCCEEEEEEecC
Confidence 999999999999999986
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.12 E-value=3.4e-10 Score=77.81 Aligned_cols=81 Identities=16% Similarity=0.248 Sum_probs=71.3
Q ss_pred cceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceE
Q 043288 48 NTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVR 127 (156)
Q Consensus 48 ~p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~ 127 (156)
.++++++++++.+.|.+.+||+.++++.|.+.+ +.|.|++.... ...|...+.|+..|+++..+
T Consensus 9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------------~~~y~~~~~L~~~I~~e~s~ 72 (114)
T 1rl1_A 9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------------GEDYNLKLELLHPIIPEQST 72 (114)
T ss_dssp CCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------------SSEEEEEECBSSCCCGGGEE
T ss_pred CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------------CcEEEEEeeCCCcCCccccE
Confidence 577999999999999999999999999999997 58999986421 12477889999999999999
Q ss_pred EEEeCCEEEEEEeccCC
Q 043288 128 ASIEDGVLTVTVPKEEV 144 (156)
Q Consensus 128 A~~~nGvL~I~lPK~~~ 144 (156)
+++.+|.|.|+|+|+++
T Consensus 73 ~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 73 FKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EEECSSSEEEEEECSSC
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.11 E-value=3.6e-10 Score=74.61 Aligned_cols=81 Identities=16% Similarity=0.305 Sum_probs=70.9
Q ss_pred cceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceE
Q 043288 48 NTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVR 127 (156)
Q Consensus 48 ~p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~ 127 (156)
.++++++++++.+.|.+.+||+.++++.|.+.+ +.|.|++.... + ..|...+.|+..|+++..+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~-----~----------~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG-----E----------DAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT-----S----------CCEEECCBBSSCBCGGGCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC-----C----------cEEEEeeEcCCccCchhEE
Confidence 478999999999999999999999999999997 58999975421 1 1377889999999999999
Q ss_pred EEEeCCEEEEEEeccCC
Q 043288 128 ASIEDGVLTVTVPKEEV 144 (156)
Q Consensus 128 A~~~nGvL~I~lPK~~~ 144 (156)
+.+.+|.|.|+|.|+++
T Consensus 66 ~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 66 YEVLSTKIEICLAKADI 82 (92)
T ss_dssp EEECSSCEEEEEEBSSS
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999864
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.66 E-value=7.3e-08 Score=67.97 Aligned_cols=77 Identities=16% Similarity=0.287 Sum_probs=67.4
Q ss_pred cceeEEEECCCeEEEEEEcCCCC--CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCC-ccC
Q 043288 48 NTRMDWKETPEAHVFKVDLPGLT--KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENG-KID 124 (156)
Q Consensus 48 ~p~~di~e~~~~~~i~~~lPG~~--~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~v-d~~ 124 (156)
.|...+.++++.++|.|.+|... ..++++.|++ +.+..... .|.-++.||..| |.+
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~--------------------PYyLRL~LP~~V~e~~ 61 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHELIDDE 61 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS--------------------SSCEEECCSSCEECCS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC--------------------CeEEEecCCCeeecCC
Confidence 58899999999999999999999 8999999997 68888732 255679999997 888
Q ss_pred ceEEEE--eCCEEEEEEeccCCC
Q 043288 125 QVRASI--EDGVLTVTVPKEEVK 145 (156)
Q Consensus 125 ~i~A~~--~nGvL~I~lPK~~~~ 145 (156)
..+|+| +.|.|+|++||..+.
T Consensus 62 ~~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESSTT
T ss_pred CcceeEeccCCEEEEEEeCCCCC
Confidence 899999 599999999998754
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.66 E-value=4.2e-07 Score=62.18 Aligned_cols=80 Identities=15% Similarity=0.305 Sum_probs=68.0
Q ss_pred cccceeEEEECCCeEEEEEEcCCCC--CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCC-c
Q 043288 46 IVNTRMDWKETPEAHVFKVDLPGLT--KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENG-K 122 (156)
Q Consensus 46 ~~~p~~di~e~~~~~~i~~~lPG~~--~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~v-d 122 (156)
...|...|.++++.++|.+.+|.+. ..++++.+++ +.+....+ .|.-++.||..+ +
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~--------------------PYyLRL~lP~~vve 73 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHELID 73 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET--------------------TEEEEEECSSCEEC
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC--------------------CeEEEEecCcceec
Confidence 3469999999999999999999876 7899999997 68888843 266779999985 7
Q ss_pred cCceEEEE--eCCEEEEEEeccCCCC
Q 043288 123 IDQVRASI--EDGVLTVTVPKEEVKK 146 (156)
Q Consensus 123 ~~~i~A~~--~nGvL~I~lPK~~~~~ 146 (156)
.+.-+|+| ++|.++|++||..+.+
T Consensus 74 d~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 74 DERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp STTCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCCcceEEeCCCcEEEEEEcCCcCCC
Confidence 77789999 5999999999987643
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.32 E-value=2.1e-06 Score=70.23 Aligned_cols=72 Identities=18% Similarity=0.241 Sum_probs=61.0
Q ss_pred ceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCc-eE
Q 043288 49 TRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQ-VR 127 (156)
Q Consensus 49 p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~-i~ 127 (156)
+++.|.+. .|.+++.|||+++++|++...++ .|+|+ .|.|.|.|.||..+.... ..
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~--------------------~g~~rR~i~LP~~L~~~~v~~ 354 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVE--------------------AGDQRRNIFLPPALSGRPITG 354 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEE--------------------ETTEEEEEECCTTTTTCCEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEE--------------------ECCEeecccCCHHHcCCCccc
Confidence 45665444 89999999999999999999964 99999 667999999999977665 78
Q ss_pred EEEeCCEEEEEEeccC
Q 043288 128 ASIEDGVLTVTVPKEE 143 (156)
Q Consensus 128 A~~~nGvL~I~lPK~~ 143 (156)
|+|+||.|+|++-...
T Consensus 355 A~~~~~~L~i~~~~~~ 370 (374)
T 3igf_A 355 AKFQNNYLIISFLEHH 370 (374)
T ss_dssp EEEETTEEEEEECCC-
T ss_pred cEEECCEEEEEEehhc
Confidence 9999999999997543
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.08 E-value=7.8e-05 Score=51.86 Aligned_cols=81 Identities=10% Similarity=0.226 Sum_probs=67.6
Q ss_pred cceeEEEECCCeEEEEEEcCCC---CCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEE-CCCCCcc
Q 043288 48 NTRMDWKETPEAHVFKVDLPGL---TKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFR-LPENGKI 123 (156)
Q Consensus 48 ~p~~di~e~~~~~~i~~~lPG~---~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~-lP~~vd~ 123 (156)
.++++++++.+.+.|.+.+||+ .++++.|.+.. +.|.|++.... +. .|.-.+. |-..|++
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~-----~~----------~y~~~~~~L~~~I~~ 83 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN-----GK----------SYSMIVNNLLKPISV 83 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS-----SS----------CEEEEEECBSSCCCT
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC-----CC----------cEEEEhHHhcCccCc
Confidence 4689999999999999999999 88999999997 58999864211 11 2666775 9899999
Q ss_pred CceEEEEeCCEEEEEEeccCC
Q 043288 124 DQVRASIEDGVLTVTVPKEEV 144 (156)
Q Consensus 124 ~~i~A~~~nGvL~I~lPK~~~ 144 (156)
++.+.....+.+.|+|-|+.+
T Consensus 84 e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 84 EGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp TTCEEEEETTEEEEEEECSSS
T ss_pred ccCEEEEeCCEEEEEEEECCC
Confidence 998988999999999999864
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.02 E-value=6.1e-05 Score=53.11 Aligned_cols=88 Identities=10% Similarity=0.142 Sum_probs=69.5
Q ss_pred cceeEEEEC-CCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccc-----cCCCccEEEEeeeceEEEEEEECCCCC
Q 043288 48 NTRMDWKET-PEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVER-----EDKNETWHRVERSRGKFLRRFRLPENG 121 (156)
Q Consensus 48 ~p~~di~e~-~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~-----~~~~~~~~~~e~~~~~f~r~i~lP~~v 121 (156)
.++.+|+++ .+.+.|.+.++++.++++.|.+.. +.|.|+....... ...+. ...|.-.+.|-..|
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~l~~~~a~g~--------~~~y~~~~~L~~~I 89 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNFLRLHPGCGP--------HTTFRWQVKLRNLI 89 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHHHHHSTTCCT--------TSCEEEEEEBSSCE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcccccccccCc--------ceeEEEeccccccC
Confidence 578999999 999999999999999999999998 5899986532211 00000 00377778899999
Q ss_pred ccCceEEEEeCCEEEEEEeccCC
Q 043288 122 KIDQVRASIEDGVLTVTVPKEEV 144 (156)
Q Consensus 122 d~~~i~A~~~nGvL~I~lPK~~~ 144 (156)
+++..+.+...+.+.|+|.|++.
T Consensus 90 ~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 90 EPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEEECSSEEEEEEEESSS
T ss_pred CchhCEEEEeCCEEEEEEEECCC
Confidence 99988888889999999999854
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.96 E-value=0.00016 Score=50.05 Aligned_cols=85 Identities=15% Similarity=0.255 Sum_probs=67.4
Q ss_pred cccccceeEEEECCCeEEEEEEcC-CC-CCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCC
Q 043288 44 SAIVNTRMDWKETPEAHVFKVDLP-GL-TKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENG 121 (156)
Q Consensus 44 ~~~~~p~~di~e~~~~~~i~~~lP-G~-~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~v 121 (156)
.+...|.+.++++.+...|.+.|| |+ +++++.|.+.. +.|.|+.+.. .+. .+.-...|...|
T Consensus 15 nG~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~-----~~~----------~~~~~~~L~~~I 78 (124)
T 1wgv_A 15 NGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE-----NGE----------RVLMEGKLTHKI 78 (124)
T ss_dssp SSBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS-----SSE----------EEEEEEEBSSCB
T ss_pred CCCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc-----CCC----------ceEEcccccCcC
Confidence 344458899999999999999999 87 89999999997 5899986531 111 122446899999
Q ss_pred ccCceEEEEeCCE-EEEEEeccCC
Q 043288 122 KIDQVRASIEDGV-LTVTVPKEEV 144 (156)
Q Consensus 122 d~~~i~A~~~nGv-L~I~lPK~~~ 144 (156)
+++.-.-.++++. |.|+|-|+..
T Consensus 79 ~~e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 79 NTESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp CTTTCEEEECTTSEEEEEECBSSS
T ss_pred CCcCCEEEEeCCCEEEEEEEECCC
Confidence 9999999998875 9999999854
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.83 E-value=0.00035 Score=48.16 Aligned_cols=86 Identities=21% Similarity=0.254 Sum_probs=67.8
Q ss_pred CCCCcccccceeEEEECCCeEEEEEEcC-C--CCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEE
Q 043288 40 PRETSAIVNTRMDWKETPEAHVFKVDLP-G--LTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFR 116 (156)
Q Consensus 40 ~~~~~~~~~p~~di~e~~~~~~i~~~lP-G--~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~ 116 (156)
|....+...|.+.+.++.+.+.|.+.|| | ++.+++.|.+.. +.|.|..+-. . +.-...
T Consensus 8 p~~~nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~g~ 68 (121)
T 3qor_A 8 PNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ--------P----------AIIDGE 68 (121)
T ss_dssp CCTTSSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS--------C----------CSEEEE
T ss_pred CcCCCCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc--------c----------eEEecc
Confidence 3344455568899999999999999999 5 789999999998 5888864310 0 112457
Q ss_pred CCCCCccCceEEEEeCC-EEEEEEeccCC
Q 043288 117 LPENGKIDQVRASIEDG-VLTVTVPKEEV 144 (156)
Q Consensus 117 lP~~vd~~~i~A~~~nG-vL~I~lPK~~~ 144 (156)
|...|+++...-.+++| .|.|+|-|...
T Consensus 69 L~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 69 LYNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp BSSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred ccccccccccEEEEcCCCEEEEEEEECCC
Confidence 88999999989999988 99999999864
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.79 E-value=0.00018 Score=49.88 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=65.5
Q ss_pred ceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEE
Q 043288 49 TRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRA 128 (156)
Q Consensus 49 p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A 128 (156)
|.++++++.+.+.|.+.+|+. +++.|.+.. +.|.+++..... + ..|.-.+.|-..|+++..+.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~~----~----------~~y~~~l~L~~~I~~e~S~~ 66 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGSD----N----------FKHLNEIDLFHCIDPNDSKH 66 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETTT----T----------EEEEEEEEBSSCEEEEEEEE
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCCC----C----------ceEEEEEEccceeccccCEE
Confidence 379999999999999999995 689999997 589998764211 1 13667789999999999998
Q ss_pred EEeCCEEEEEEeccCC
Q 043288 129 SIEDGVLTVTVPKEEV 144 (156)
Q Consensus 129 ~~~nGvL~I~lPK~~~ 144 (156)
+..++.+.|+|.|+.+
T Consensus 67 ~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 67 KRTDRSILCCLRKGES 82 (125)
T ss_dssp EECSSCEEEEEEESST
T ss_pred EECCCEEEEEEEECCC
Confidence 8888899999999864
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.66 E-value=0.00036 Score=48.68 Aligned_cols=79 Identities=24% Similarity=0.302 Sum_probs=64.1
Q ss_pred ccceeEEEECCCeEEEEEEcC-C--CCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCcc
Q 043288 47 VNTRMDWKETPEAHVFKVDLP-G--LTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKI 123 (156)
Q Consensus 47 ~~p~~di~e~~~~~~i~~~lP-G--~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~ 123 (156)
..|.+.++++.+...|.+.|| | ++++++.|.+.. +.|.|+.+.. . ..-...|...|++
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~~~L~~~I~~ 66 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ--------P----------PVVDGELYNEVKV 66 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS--------C----------CSBCSCBSSCBCS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc--------e----------EEEeccccccccc
Confidence 357899999999999999999 6 899999999997 5899985310 0 0112467888999
Q ss_pred CceEEEEeCC-EEEEEEeccCC
Q 043288 124 DQVRASIEDG-VLTVTVPKEEV 144 (156)
Q Consensus 124 ~~i~A~~~nG-vL~I~lPK~~~ 144 (156)
+...-.+++| .|.|+|-|..+
T Consensus 67 e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 67 EESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS
T ss_pred ccCEEEEcCCCEEEEEEEECCC
Confidence 9989899888 89999999864
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.56 E-value=0.00084 Score=46.80 Aligned_cols=76 Identities=12% Similarity=0.225 Sum_probs=61.4
Q ss_pred cceeEEEECCCeEEEEEEcC-CCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCce
Q 043288 48 NTRMDWKETPEAHVFKVDLP-GLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQV 126 (156)
Q Consensus 48 ~p~~di~e~~~~~~i~~~lP-G~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i 126 (156)
.|.+.++++.+.+.|.+.|| |++++++.|.+.. +.|.|++. +. . .-...|...|+++..
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--------g~----------~-~~~~~L~~~I~~e~S 63 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--------GE----------I-VIDGELLHEVDVSSL 63 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--------TE----------E-EEEEEBSSCEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--------CE----------e-eEccccccccccccC
Confidence 47899999999999999996 8999999999997 58999852 10 1 234678899999988
Q ss_pred EEEEeCCEEEEEEeccC
Q 043288 127 RASIEDGVLTVTVPKEE 143 (156)
Q Consensus 127 ~A~~~nGvL~I~lPK~~ 143 (156)
.-.+.++.|.|+|-|..
T Consensus 64 ~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 64 WWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEETTEEEEEEEESS
T ss_pred EEEEeCCEEEEEEEECC
Confidence 88899999999999983
No 25
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.49 E-value=0.00032 Score=50.29 Aligned_cols=78 Identities=18% Similarity=0.304 Sum_probs=63.8
Q ss_pred cceeEEEECCCeEEEEEEcCCCCCCCeEEEEe-CCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCce
Q 043288 48 NTRMDWKETPEAHVFKVDLPGLTKEDVKLEIE-DHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQV 126 (156)
Q Consensus 48 ~p~~di~e~~~~~~i~~~lPG~~~edi~v~v~-~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i 126 (156)
.|.++++++.+.++|.|.++++ +++.|.+. . +.|.+++. .. .+ ..|.-.+.|=..|+++ .
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~----~~----------~~y~~~l~L~~~Idpe-S 64 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA----QG----------ERFEFSLELYGKIMTE-Y 64 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TT----TT----------EEEEEEEEBSSCEEEE-E
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cC----CC----------ceEEEEeEhhhccccc-c
Confidence 5889999999999999999997 47888888 6 58999986 11 11 1366778898999999 8
Q ss_pred EEEEeCCEEEEEEeccCC
Q 043288 127 RASIEDGVLTVTVPKEEV 144 (156)
Q Consensus 127 ~A~~~nGvL~I~lPK~~~ 144 (156)
+.+.....+.|+|.|+.+
T Consensus 65 ~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 65 RKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEEESSSEEEEEEECCS
T ss_pred eEEecCCEEEEEEEECCC
Confidence 888888889999999764
No 26
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.31 E-value=0.0038 Score=44.88 Aligned_cols=78 Identities=17% Similarity=0.300 Sum_probs=64.5
Q ss_pred ccceeEEEECCCeEEEEEEcC-CCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCc
Q 043288 47 VNTRMDWKETPEAHVFKVDLP-GLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQ 125 (156)
Q Consensus 47 ~~p~~di~e~~~~~~i~~~lP-G~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~ 125 (156)
..|.+.++++.+.+.|.|.|| |+..++|.|.+.. +.|.|+.+ +. .+ -...|...|+++.
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--------g~----------~~-l~g~L~~~I~~ee 71 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--------GR----------EI-LKGKLFDSTIADE 71 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--------TE----------EE-EEEEBSSCBCGGG
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--------CE----------EE-EeeccccccCccc
Confidence 357899999999999999998 8999999999997 58999853 10 01 3467889999999
Q ss_pred eEEEEeCCE-EEEEEeccCC
Q 043288 126 VRASIEDGV-LTVTVPKEEV 144 (156)
Q Consensus 126 i~A~~~nGv-L~I~lPK~~~ 144 (156)
-.-.+.++. |.|+|-|+..
T Consensus 72 S~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 72 GTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEECCCEEEEEEEBSSC
T ss_pred cEEEEcCCcEEEEEEEEcCC
Confidence 999998874 9999999864
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.00013 Score=51.25 Aligned_cols=84 Identities=13% Similarity=0.256 Sum_probs=59.2
Q ss_pred cceeEEEECCCe-------EEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCC
Q 043288 48 NTRMDWKETPEA-------HVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPEN 120 (156)
Q Consensus 48 ~p~~di~e~~~~-------~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~ 120 (156)
.|.+.++++.+. ++|.|.+|++. ++.|.+.. +.|.+++.......... ...|.-.+.|...
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~---------~~~y~~~l~L~~~ 73 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDEN---------VHHYQLHIDLYKE 73 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------CEEBCEEEECSSC
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCcc---------CceEEEEEEChhh
Confidence 477889888877 99999999974 78888887 58999876421000000 0136677899999
Q ss_pred CccCceEEEEeCCE-EEEEEeccC
Q 043288 121 GKIDQVRASIEDGV-LTVTVPKEE 143 (156)
Q Consensus 121 vd~~~i~A~~~nGv-L~I~lPK~~ 143 (156)
|+++..+.++.++. |.|+|.|+.
T Consensus 74 Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 74 IIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CCSSSEEEEECCC--CEEEEEECS
T ss_pred ccccccEEEECCCEEEEEEEEECC
Confidence 99999999999888 999999987
No 28
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=85.16 E-value=4.7 Score=25.99 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=27.1
Q ss_pred EEEEEEcC-CCCCCCeEEEEeCCcEEEEEEEEecc
Q 043288 60 HVFKVDLP-GLTKEDVKLEIEDHRVLQITADRNVE 93 (156)
Q Consensus 60 ~~i~~~lP-G~~~edi~v~v~~g~~L~I~g~~~~~ 93 (156)
|.-.+.|| +++.+.++-++++| +|+|+.-+...
T Consensus 63 f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~ 96 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSC
T ss_pred EEEEEECCCCcchhHcEEEEECC-EEEEEEEccCc
Confidence 44467899 69999999999997 99999877553
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=85.11 E-value=2.2 Score=26.76 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=29.1
Q ss_pred EEEEEEECCCCCccCceEEEEeCCEEEEEEeccC
Q 043288 110 KFLRRFRLPENGKIDQVRASIEDGVLTVTVPKEE 143 (156)
Q Consensus 110 ~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~~ 143 (156)
.|.-.+.|| +++.+.|+..+++|.|+|..-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 478889999 899999999999999999997654
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=80.62 E-value=3.6 Score=26.33 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=27.3
Q ss_pred eEEEEEEcC-CCCCCCeEEEEeCCcEEEEEEEEe
Q 043288 59 AHVFKVDLP-GLTKEDVKLEIEDHRVLQITADRN 91 (156)
Q Consensus 59 ~~~i~~~lP-G~~~edi~v~v~~g~~L~I~g~~~ 91 (156)
.|.-.+.|| +++.+.++-++.+| +|+|+.-+.
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~ 97 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNG-VLEIRIPKR 97 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC
T ss_pred EEEEEEECCCCcChHHeEEEEeCC-EEEEEEecC
Confidence 577788999 58999999999997 999997654
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=77.56 E-value=4.9 Score=25.33 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=29.0
Q ss_pred EEEEEEECCCCCccCceEEEEeCCEEEEEEeccC
Q 043288 110 KFLRRFRLPENGKIDQVRASIEDGVLTVTVPKEE 143 (156)
Q Consensus 110 ~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~~ 143 (156)
.|.-.+.|| +++.+.|+-.+.+|.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477889999 899999999999999999997653
No 32
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=76.81 E-value=9.2 Score=26.74 Aligned_cols=32 Identities=9% Similarity=0.088 Sum_probs=27.9
Q ss_pred EEEEEECCCCCccCceEEEEeCCEEEEEEeccC
Q 043288 111 FLRRFRLPENGKIDQVRASIEDGVLTVTVPKEE 143 (156)
Q Consensus 111 f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~~ 143 (156)
|.-.+.|| +++.+.|+..+++|.|+|+.-+..
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 55668898 789999999999999999998765
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=76.31 E-value=5.2 Score=26.10 Aligned_cols=32 Identities=6% Similarity=0.189 Sum_probs=28.5
Q ss_pred EEEEEEECCCCCccCceEEEEeCCEEEEEEecc
Q 043288 110 KFLRRFRLPENGKIDQVRASIEDGVLTVTVPKE 142 (156)
Q Consensus 110 ~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~ 142 (156)
.|.-.+.|| +++.+.|+..+.+|.|+|..-+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 477889999 89999999999999999998654
No 34
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=73.65 E-value=6.6 Score=25.31 Aligned_cols=33 Identities=12% Similarity=0.140 Sum_probs=29.2
Q ss_pred EEEEEEECCCCCccCceEEEEeCCEEEEEEeccC
Q 043288 110 KFLRRFRLPENGKIDQVRASIEDGVLTVTVPKEE 143 (156)
Q Consensus 110 ~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~~ 143 (156)
.|.-.+.|| +++.+.|+-.+.+|.|+|..-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 377789999 999999999999999999998754
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=73.56 E-value=8.7 Score=25.56 Aligned_cols=33 Identities=12% Similarity=0.195 Sum_probs=28.4
Q ss_pred EEEEEECCCCCccCceEEEEeC-CEEEEEEeccCC
Q 043288 111 FLRRFRLPENGKIDQVRASIED-GVLTVTVPKEEV 144 (156)
Q Consensus 111 f~r~i~lP~~vd~~~i~A~~~n-GvL~I~lPK~~~ 144 (156)
|.-.+.|| +++.+.|+..+.+ |.|+|+.-+...
T Consensus 36 ~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 56668999 8999999999999 999999987654
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=72.46 E-value=7.9 Score=26.93 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=28.3
Q ss_pred eEEEEEEcC-CCCCCCeEEEEeCCcEEEEEEEEecc
Q 043288 59 AHVFKVDLP-GLTKEDVKLEIEDHRVLQITADRNVE 93 (156)
Q Consensus 59 ~~~i~~~lP-G~~~edi~v~v~~g~~L~I~g~~~~~ 93 (156)
.|.-.+.|| +++.+.|+-++++| +|+|+..+...
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nG-vL~I~lPK~~~ 139 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENG-VLTVTVPKAEV 139 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETT-EEEEEEECCCC
T ss_pred EEEEEEECCCCccccceEEEEECC-EEEEEEEccCc
Confidence 466678899 78999999999997 99999877543
No 37
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=64.03 E-value=6.1 Score=24.19 Aligned_cols=15 Identities=27% Similarity=0.392 Sum_probs=12.2
Q ss_pred CceEEEEeCCEEEEE
Q 043288 124 DQVRASIEDGVLTVT 138 (156)
Q Consensus 124 ~~i~A~~~nGvL~I~ 138 (156)
+.|+|.|+||+|.--
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 459999999999743
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=59.76 E-value=12 Score=26.75 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=28.6
Q ss_pred EEEEEEECCCCCccCceEEEEeCCEEEEEEeccC
Q 043288 110 KFLRRFRLPENGKIDQVRASIEDGVLTVTVPKEE 143 (156)
Q Consensus 110 ~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~~ 143 (156)
.|.-.+.|| +++.+.|+..+.+|.|+|+.-+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 377779999 899999999999999999987653
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=56.81 E-value=21 Score=23.19 Aligned_cols=19 Identities=21% Similarity=0.496 Sum_probs=15.2
Q ss_pred CCCeEEEEeCCcEEEEEEEE
Q 043288 71 KEDVKLEIEDHRVLQITADR 90 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~ 90 (156)
|+.|+|++++ +.++|+|.+
T Consensus 20 P~gV~V~i~~-~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEET-TEEEEEETT
T ss_pred CCCCEEEEeC-CEEEEECCC
Confidence 4678899986 699999864
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=56.41 E-value=20 Score=25.82 Aligned_cols=46 Identities=22% Similarity=0.504 Sum_probs=31.5
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEEecc
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPKE 142 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~ 142 (156)
|+.|+|++++ +.++|+|.+ |...+.+ +.. +....+|+.|.|..+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpk------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPK------------------GELTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 4678899986 699999763 3444544 543 44557899988876543
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=52.80 E-value=40 Score=25.04 Aligned_cols=46 Identities=15% Similarity=0.357 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEEecc
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPKE 142 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~ 142 (156)
++.|+|++++ +.++|+|.+ |...+.+ +.. |....++|.|.|..+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPk------------------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPK------------------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCC------------------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 4678899986 699999764 3344444 433 44557899988886644
No 42
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=48.02 E-value=35 Score=24.70 Aligned_cols=45 Identities=22% Similarity=0.435 Sum_probs=29.3
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEEe
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVP 140 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lP 140 (156)
|+.++|++++ +.++|+|.+ |...+.+.-| . ++...+++.|.|..+
T Consensus 14 P~gV~v~i~~-~~V~VkGpk------------------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPK------------------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECSS------------------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 3678999986 699999763 3444544322 2 444578898888753
No 43
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=47.89 E-value=41 Score=24.20 Aligned_cols=47 Identities=19% Similarity=0.380 Sum_probs=31.2
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEEecc
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPKE 142 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~ 142 (156)
|+.++|++++ +.++|+|.+ |...+.+. +.. ++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpk------------------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDN------------------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 3678899986 699999763 34444442 333 44557899988876643
No 44
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=39.03 E-value=44 Score=22.31 Aligned_cols=30 Identities=7% Similarity=0.152 Sum_probs=23.6
Q ss_pred EEEEEEECCCCCccCceEEEEeCCEEEEEE
Q 043288 110 KFLRRFRLPENGKIDQVRASIEDGVLTVTV 139 (156)
Q Consensus 110 ~f~r~i~lP~~vd~~~i~A~~~nGvL~I~l 139 (156)
...-+|.||.+++.+.+...+...-|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 356678999999999999999999999987
No 45
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=38.31 E-value=72 Score=22.86 Aligned_cols=44 Identities=20% Similarity=0.456 Sum_probs=29.8
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEEe
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVP 140 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lP 140 (156)
|+.|+|++++ +.++|+|-+ |...+. |+.. ++...+++.|.|..+
T Consensus 12 P~gV~v~i~~-~~v~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPK------------------GELEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSS------------------CEEEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCC------------------cEEEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 4789999986 699999763 334444 4434 344467999888753
No 46
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=36.81 E-value=19 Score=23.64 Aligned_cols=17 Identities=35% Similarity=0.626 Sum_probs=14.7
Q ss_pred ceEEEEeCCEEEEEEec
Q 043288 125 QVRASIEDGVLTVTVPK 141 (156)
Q Consensus 125 ~i~A~~~nGvL~I~lPK 141 (156)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 47888999999999973
No 47
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=35.53 E-value=1e+02 Score=22.28 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=30.1
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEE--eCCEEEEEEec
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASI--EDGVLTVTVPK 141 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~--~nGvL~I~lPK 141 (156)
|+.++|++++ +.++|+|.+ |...|. |+. ..++..+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~~--~~~----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPR------------------GKLTRN--FKH----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CCC----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------ceEEEE--ccC----CcEEEEEEcCCCEEEEEECC
Confidence 4688999986 699999763 334443 331 1244456 78898888653
No 48
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=34.34 E-value=78 Score=24.83 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=29.2
Q ss_pred CCCCeEEEEeCCcEEEEEEEEecccc--CC--CccEEE-------E--eeeceEEEEEEECCCC
Q 043288 70 TKEDVKLEIEDHRVLQITADRNVERE--DK--NETWHR-------V--ERSRGKFLRRFRLPEN 120 (156)
Q Consensus 70 ~~edi~v~v~~g~~L~I~g~~~~~~~--~~--~~~~~~-------~--e~~~~~f~r~i~lP~~ 120 (156)
+++++.| ++| .|+|++.+..... .. ...|.+ + ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v--~dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KKG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ETT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--ECC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 5566555 576 8999998764211 01 012321 1 2457899999999975
No 49
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=33.65 E-value=26 Score=21.27 Aligned_cols=36 Identities=11% Similarity=0.260 Sum_probs=28.8
Q ss_pred eEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEE
Q 043288 51 MDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQI 86 (156)
Q Consensus 51 ~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I 86 (156)
-.|....+.|.|++.+=|+....|.+.-.||..+.|
T Consensus 6 RtWtDrtG~F~VeA~flg~~dgki~LhK~nGv~I~V 41 (68)
T 2hbp_A 6 RLWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKIAV 41 (68)
T ss_dssp EEEEBSSSCCEEEEEEEEEETTEEEEECTTSCEEEE
T ss_pred cEEEcCCCCeEEEEEEEEEeCCEEEEEecCCcEEEe
Confidence 467778889999999999998888888887743333
No 50
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=33.04 E-value=1.1e+02 Score=22.10 Aligned_cols=46 Identities=22% Similarity=0.458 Sum_probs=30.0
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEE-EeCCEEEEEEec
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRAS-IEDGVLTVTVPK 141 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~-~~nGvL~I~lPK 141 (156)
|+.++|++++ +.++|+|.+ |...+. ++. . .+... .+++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~~--~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPR------------------GTLTKN--LKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------eEEEEE--ccC-C---cEEEEEecCCeEEEEECC
Confidence 5788999986 699999763 334443 442 1 23334 468999888654
No 51
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=32.55 E-value=29 Score=21.17 Aligned_cols=22 Identities=23% Similarity=0.427 Sum_probs=18.3
Q ss_pred CCCCCCeEEEEeCCcEEEEEEEE
Q 043288 68 GLTKEDVKLEIEDHRVLQITADR 90 (156)
Q Consensus 68 G~~~edi~v~v~~g~~L~I~g~~ 90 (156)
-|+.+.|.+....| .|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTE-EEEEEEEC
T ss_pred EECCCEEEEEeCce-EEEEEcCC
Confidence 46788899999886 89999985
No 52
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=31.87 E-value=33 Score=23.15 Aligned_cols=26 Identities=8% Similarity=0.073 Sum_probs=22.1
Q ss_pred cCCCCCCCeEEEEeCCcEEEEEEEEec
Q 043288 66 LPGLTKEDVKLEIEDHRVLQITADRNV 92 (156)
Q Consensus 66 lPG~~~edi~v~v~~g~~L~I~g~~~~ 92 (156)
-|.+++-.|.|.+++| .++++|....
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESC
T ss_pred CCcccceeEEEEEECC-EEEEEEECCC
Confidence 4677888899999986 9999999765
No 53
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=31.08 E-value=1.6e+02 Score=21.87 Aligned_cols=64 Identities=14% Similarity=0.255 Sum_probs=39.0
Q ss_pred EcCCCCCCCeEEEEe-CCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEE
Q 043288 65 DLPGLTKEDVKLEIE-DHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTV 137 (156)
Q Consensus 65 ~lPG~~~edi~v~v~-~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I 137 (156)
.|||+..+==-|..+ +++.|.+.... ...++..-.. |.+.|++.+...-|.+.|... .+|.+.|
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~-------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~v 85 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK-------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVI 85 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET-------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC-------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEE
Confidence 589998753346776 23566665332 2223333333 778899999877888877643 5665554
No 54
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=31.00 E-value=69 Score=21.07 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=26.3
Q ss_pred EEEEEEECCCCC-ccCceEEEEeCCEEEEEEe
Q 043288 110 KFLRRFRLPENG-KIDQVRASIEDGVLTVTVP 140 (156)
Q Consensus 110 ~f~r~i~lP~~v-d~~~i~A~~~nGvL~I~lP 140 (156)
...-+|.||.++ +.+.+...+...-|.|.+.
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 356679999888 9999999999999999873
No 55
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=30.32 E-value=38 Score=22.93 Aligned_cols=16 Identities=25% Similarity=0.603 Sum_probs=14.2
Q ss_pred eEEEEeCCEEEEEEec
Q 043288 126 VRASIEDGVLTVTVPK 141 (156)
Q Consensus 126 i~A~~~nGvL~I~lPK 141 (156)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7888999999999974
No 56
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=29.77 E-value=1.1e+02 Score=20.07 Aligned_cols=37 Identities=5% Similarity=0.240 Sum_probs=27.1
Q ss_pred EEECCCeEEEEEEc-CCCCCCCeEEEEeCCcEEEEEEEEe
Q 043288 53 WKETPEAHVFKVDL-PGLTKEDVKLEIEDHRVLQITADRN 91 (156)
Q Consensus 53 i~e~~~~~~i~~~l-PG~~~edi~v~v~~g~~L~I~g~~~ 91 (156)
+.++++.+.|.+.+ ||.+++.|. .+.++ .|.|.-.-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~~-~LkV~v~Ap 45 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHGD-EVKVAITAP 45 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECSS-CEEEECCCC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccCC-EEEEEEecC
Confidence 46678889999988 899888774 45654 788875543
No 57
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=28.78 E-value=74 Score=22.05 Aligned_cols=31 Identities=6% Similarity=0.312 Sum_probs=26.4
Q ss_pred EEEEEEECCCCCccCceEEEEeCCEEEEEEe
Q 043288 110 KFLRRFRLPENGKIDQVRASIEDGVLTVTVP 140 (156)
Q Consensus 110 ~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lP 140 (156)
...-+|.||..+..+.+...+...-|+|.+.
T Consensus 24 eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 24 EVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp EEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred EEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 3566799999999999999999999999873
No 58
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=28.11 E-value=1.5e+02 Score=20.49 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=45.9
Q ss_pred cccceeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCc
Q 043288 46 IVNTRMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQ 125 (156)
Q Consensus 46 ~~~p~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~ 125 (156)
...|.+.|...|+.|.--+-+|+- +..++..|.-....+ ..| .-+..+++.+|.-...++
T Consensus 33 ~~s~~~KIlS~DgtF~N~~m~~~~-----------~aiIt~yGtY~l~SD---~~Y------~E~i~kni~~p~~~g~~n 92 (142)
T 4gzv_A 33 KPSNTFKVLSDDGRIVNFTIIPGA-----------DAIITGYGTYKQLTD---DSY------KESIEKNIHLPMLDNQDN 92 (142)
T ss_dssp EEEEEEEEECTTSEEEEEECCTTS-----------CCEEEEEEEEEEEET---TEE------EEEEEEESSSGGGTTEEE
T ss_pred eecCceEEECCCCcEEEEEEeCCC-----------CcEEEEeEEEEecCC---Cee------eeeecccccCccccCCcc
Confidence 345778999888888665545642 223344444333222 122 224678888897776665
Q ss_pred -eEEEE-eCCEEEEEE
Q 043288 126 -VRASI-EDGVLTVTV 139 (156)
Q Consensus 126 -i~A~~-~nGvL~I~l 139 (156)
++-++ .|++|.|..
T Consensus 93 ~L~fe~~~dn~l~lsy 108 (142)
T 4gzv_A 93 ILEFEIKDNDYLHLKY 108 (142)
T ss_dssp EEEEEEETTTEEEEEE
T ss_pred EEEEEEccCCEEEEEE
Confidence 78777 688988887
No 59
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=27.71 E-value=81 Score=23.43 Aligned_cols=44 Identities=25% Similarity=0.283 Sum_probs=24.1
Q ss_pred EEEeCCcEEEEEEEEecccc--CCCccEEE---EeeeceEEEEEEECCCC
Q 043288 76 LEIEDHRVLQITADRNVERE--DKNETWHR---VERSRGKFLRRFRLPEN 120 (156)
Q Consensus 76 v~v~~g~~L~I~g~~~~~~~--~~~~~~~~---~e~~~~~f~r~i~lP~~ 120 (156)
+.+++| .|+|++.+..... -....+.. ....+|.|+-++.||..
T Consensus 49 v~v~~G-~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGG-VLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETT-EEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECC-EEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 455676 8888887653100 00011111 12356889989999964
No 60
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=25.92 E-value=75 Score=23.45 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=28.3
Q ss_pred eeEEEECCCeEEEEEEcCCCCCCCeEEEEeCCcEEEEEEEE
Q 043288 50 RMDWKETPEAHVFKVDLPGLTKEDVKLEIEDHRVLQITADR 90 (156)
Q Consensus 50 ~~di~e~~~~~~i~~~lPG~~~edi~v~v~~g~~L~I~g~~ 90 (156)
.+.+.+.++.+.|+++.+.--.+.|++.+++| .|.|.-+.
T Consensus 33 ~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g-~L~I~~~~ 72 (250)
T 3jx8_A 33 DFEYEQSDKAPYLSVTIDENLFDYLVTEVEGG-TLKIYPKS 72 (250)
T ss_dssp EEEEEECSSCCEEEEEEEGGGGGGEEEEEETT-EEEEEECB
T ss_pred EEEEEECCCCceEEEEECccccceEEEEEECC-EEEEEEcC
Confidence 45555554567777776655568899999975 99998654
No 61
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.66 E-value=98 Score=22.41 Aligned_cols=53 Identities=19% Similarity=0.188 Sum_probs=32.3
Q ss_pred EcCCCCCCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCE---EEEEEec
Q 043288 65 DLPGLTKEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGV---LTVTVPK 141 (156)
Q Consensus 65 ~lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGv---L~I~lPK 141 (156)
..|=-=|+.++|++++ +.++|+|.+ |...+ .||.. .+....++|. |.|..+.
T Consensus 7 k~pI~IP~gV~V~i~~-~~VtVkGpk------------------G~L~~--~~~~~----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 7 NQTVDIPENVDITLKG-RTVIVKGPR------------------GTLRR--DFNHI----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp ---CCCCTTCEEEEET-TEEEEEETT------------------EEEEE--ECCSS----SCEEEEETTTTCEEEEECSC
T ss_pred cCcEEcCCCCEEEEeC-CEEEEECCC------------------eEEEE--EeCCC----CEEEEEecCceeEEEEEcCC
Confidence 3444446789999996 699999763 33444 44431 3445567887 7777654
Q ss_pred c
Q 043288 142 E 142 (156)
Q Consensus 142 ~ 142 (156)
.
T Consensus 62 ~ 62 (192)
T 2zkr_e 62 G 62 (192)
T ss_dssp C
T ss_pred C
Confidence 3
No 62
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=25.49 E-value=30 Score=25.86 Aligned_cols=47 Identities=21% Similarity=0.364 Sum_probs=30.4
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEEecc
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTVPKE 142 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~lPK~ 142 (156)
|+.|+|++++ +.++|+|.+ |...+ .|+..++.. ..+||.|.|..+..
T Consensus 54 P~gV~V~i~~-~~VtVKGPk------------------G~L~~--~~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPL------------------GELAL--TYPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESS-SEEEECCSS------------------CCEEE--ECCSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEE--EcCCCEEEE----EecCCEEEEEcCCC
Confidence 4678899986 699999764 23434 445544331 45788888876643
No 63
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=24.32 E-value=1.1e+02 Score=27.94 Aligned_cols=96 Identities=16% Similarity=0.258 Sum_probs=55.8
Q ss_pred cccccceeEEEECCCeEEEEEEc----------CCCCCCCeEEEEeCCc---EEEEEEEEeccccCCCccEEEEeeeceE
Q 043288 44 SAIVNTRMDWKETPEAHVFKVDL----------PGLTKEDVKLEIEDHR---VLQITADRNVEREDKNETWHRVERSRGK 110 (156)
Q Consensus 44 ~~~~~p~~di~e~~~~~~i~~~l----------PG~~~edi~v~v~~g~---~L~I~g~~~~~~~~~~~~~~~~e~~~~~ 110 (156)
..+--..++|++.++.|++++.+ |||+-.-|+|.++.+. .=.+- ..+ ...+..|...=+-.|.
T Consensus 804 g~fDl~~~~v~~~~~~~~~~~~~~~~~~npw~~~gfs~q~~~iy~~~~~~g~~~~l~---~~~-~~~~~~W~~~~~~~G~ 879 (1020)
T 1ulv_A 804 GAFDLTGVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGEGGATPGLP---GTN-INLEHAWDSVIVTDGR 879 (1020)
T ss_dssp TTTCEEEEEEEEETTEEEEEEEESSCCCCTTCCSSCSSEEEEEEEECSCSSCEECSG---GGC-CEESSCEEEEEEECCS
T ss_pred CccccceeEEEEcCCEEEEEEEecccCCCCCCCCCcceeEEEEEEECCCCCCcccCC---ccc-CCCCCCccEEEEEecc
Confidence 34445779999999999999988 6899999999998541 10110 111 1112223222122231
Q ss_pred EEEE-EECCCCCccCc--eEEEEeCCEEEEEEeccC
Q 043288 111 FLRR-FRLPENGKIDQ--VRASIEDGVLTVTVPKEE 143 (156)
Q Consensus 111 f~r~-i~lP~~vd~~~--i~A~~~nGvL~I~lPK~~ 143 (156)
+-.. +..|++-.... |.|.-.+..++|++||+.
T Consensus 880 ~~~~~~~~~~g~~~~~~~v~~~~~~~~i~~~v~~~~ 915 (1020)
T 1ulv_A 880 FDGAGVYAPDGTRTSAVSLLAVPEARQIVTRVPKAA 915 (1020)
T ss_dssp TTCCEEECTTSCEEECCEEEEETTTTEEEEEEEGGG
T ss_pred CCCcceECCCCCcCCCceEEEecCCCEEEEEEcHHH
Confidence 2221 45576544333 444335889999999964
No 64
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=24.18 E-value=1.4e+02 Score=22.62 Aligned_cols=43 Identities=14% Similarity=0.189 Sum_probs=26.1
Q ss_pred CCCCeEEEEeCCcEEEEEEEEeccccCCCccEE-EEeeeceEEEEEEECCCC
Q 043288 70 TKEDVKLEIEDHRVLQITADRNVEREDKNETWH-RVERSRGKFLRRFRLPEN 120 (156)
Q Consensus 70 ~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~-~~e~~~~~f~r~i~lP~~ 120 (156)
.++++.| ++| .|+|++.+.. +..+. .....+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~t-----sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDSTS-----GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSSC-----CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecCC-----CCEEEECceEeeEEEEEEEEeCCC
Confidence 3555554 666 5888765421 22222 234567899999999964
No 65
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=24.18 E-value=1.2e+02 Score=19.82 Aligned_cols=31 Identities=16% Similarity=0.024 Sum_probs=26.7
Q ss_pred EEEEEEECCCC--CccCceEEEEeCCEEEEEEe
Q 043288 110 KFLRRFRLPEN--GKIDQVRASIEDGVLTVTVP 140 (156)
Q Consensus 110 ~f~r~i~lP~~--vd~~~i~A~~~nGvL~I~lP 140 (156)
...-+|.||.+ ++.+.+...+...-|.|.+.
T Consensus 27 eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 27 ELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp EEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred eEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 46677999988 89999999999999999885
No 66
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A
Probab=24.08 E-value=2.2e+02 Score=21.13 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=23.5
Q ss_pred EEEeCCcEEEEEEEEeccccCCCc-cEE-----EEe---eeceEEEEEEECCCC
Q 043288 76 LEIEDHRVLQITADRNVEREDKNE-TWH-----RVE---RSRGKFLRRFRLPEN 120 (156)
Q Consensus 76 v~v~~g~~L~I~g~~~~~~~~~~~-~~~-----~~e---~~~~~f~r~i~lP~~ 120 (156)
+.+.+| .|+|++.+.......+. .|. .+. ..+|.|+-++.||..
T Consensus 56 ~~v~~G-~L~I~a~~~~~~~~~g~~~~tSg~i~S~~~f~~~yG~~E~r~klp~g 108 (272)
T 3azy_A 56 AFVENG-CLVIEARKEQVSDEYGTYDYTSARMTTEGKFEIKYGKIEIRAKLPKG 108 (272)
T ss_dssp EEEETT-EEEEEEEEEEEECSSCEEEEEECEEECTTTCEESSEEEEEEEECCCS
T ss_pred eEEcCC-EEEEEEEcccccCCCCCEeEEEeEEEecCcccccCcEEEEEEEcCCC
Confidence 345676 78888776532111111 111 111 236888888999864
No 67
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=23.79 E-value=30 Score=24.81 Aligned_cols=43 Identities=26% Similarity=0.417 Sum_probs=28.5
Q ss_pred CCCeEEEEeCCcEEEEEEEEeccccCCCccEEEEeeeceEEEEEEECCCCCccCceEEEEeCCEEEEEE
Q 043288 71 KEDVKLEIEDHRVLQITADRNVEREDKNETWHRVERSRGKFLRRFRLPENGKIDQVRASIEDGVLTVTV 139 (156)
Q Consensus 71 ~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~i~lP~~vd~~~i~A~~~nGvL~I~l 139 (156)
|+.|+|++++ +.++|+|-+ |...+. |+.. ++...+++.|.|..
T Consensus 11 P~gV~v~i~~-~~V~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKN------------------GELTRT--LNDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESS-SEEECCBTT------------------BCCEEE--CCSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------EEEEEE--CCCC-----EEEEEeCCEEEEEE
Confidence 4678888886 689988653 333344 3543 44457889988883
No 68
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=23.70 E-value=49 Score=22.50 Aligned_cols=17 Identities=35% Similarity=0.499 Sum_probs=14.6
Q ss_pred CceEEEEeCCEEEEEEe
Q 043288 124 DQVRASIEDGVLTVTVP 140 (156)
Q Consensus 124 ~~i~A~~~nGvL~I~lP 140 (156)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999995
No 69
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=23.39 E-value=80 Score=23.19 Aligned_cols=14 Identities=14% Similarity=0.427 Sum_probs=11.0
Q ss_pred eceEEEEEEECCCC
Q 043288 107 SRGKFLRRFRLPEN 120 (156)
Q Consensus 107 ~~~~f~r~i~lP~~ 120 (156)
.+|.|+-++.||..
T Consensus 86 ~yG~~E~r~klp~g 99 (245)
T 2hyk_A 86 QYGRVEASIQIPRG 99 (245)
T ss_dssp CSEEEEEEEECCCS
T ss_pred cCCeEEEEEEcCCC
Confidence 46889988999864
No 70
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=22.10 E-value=1.2e+02 Score=20.05 Aligned_cols=29 Identities=17% Similarity=0.031 Sum_probs=25.5
Q ss_pred EEEEEECCCC--CccCceEEEEeCCEEEEEE
Q 043288 111 FLRRFRLPEN--GKIDQVRASIEDGVLTVTV 139 (156)
Q Consensus 111 f~r~i~lP~~--vd~~~i~A~~~nGvL~I~l 139 (156)
..-+|.||.+ +..+.+...+...-|.|.+
T Consensus 19 V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~ 49 (131)
T 1wfi_A 19 LDLAVPFRVSFRLKGKDVVVDIQRRHLRVGL 49 (131)
T ss_dssp EEEEECCCCSSCCCTTSEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCcccccceEEEEeCCEEEEEE
Confidence 4566889987 8999999999999999998
Done!