Your job contains 1 sequence.
>043289
MGGATGSRRKTSNNRNKSKQRRKPDPSSSSGRRLRNSLFVEGGLLSDWQQQQPQQLNSCS
KARKSNLNSNSGNLNPSKVLASKSGSKKSNGNAFGYQYPSVDLKELCFGGNDGDINLDES
QPINLLGSKDSRIVAYVDQTPDLKPQNLIYSCDYDSSFVLGDSSHRGLGFCDDSEATPSG
IDSSSKHREQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIGGMK
LYTQDLSDEGSDDQSASESLHDETSESYSEGDGSEDLSDSDSVIDEEVAEDYVEGIGGSD
NVLDAKWLVEQDFDGSDDDSSSSSGFDGTVEKLSGIAIQEASREYGMKKPLPLSRKKYST
GDSCSFALDDLMFVKDPRVFSAKKKHVAQLPQSWPREAQKSKKSRNLPGAKKKHRKEMIA
VKRRERMLRRGVDLEDINSTLEQIVLEEVDMFSFQPMHHRDCSQVRRLAAIYRLRSDSQG
SGKKRFVTVTRTQHTCMPSSADRLRLEKLIGAGNEDIDFAITEGPYTKSANADRKSSKSS
KSVTVHGNSGKASKKKGSGKKVAYANQPMSFVSSGILQSDSVEIRTVDAVDINETCESKG
TVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEFS
NTDDDSARKESRSNSARKESRSNSAKKGAQNIGAF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043289
(695 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085059 - symbol:AT3G09850 species:3702 "Arabi... 1315 3.3e-134 1
UNIPROTKB|Q5U4Z3 - symbol:zgpat "Zinc finger CCCH-type wi... 148 4.4e-08 2
UNIPROTKB|Q28H71 - symbol:zgpat "Zinc finger CCCH-type wi... 162 1.1e-07 2
MGI|MGI:1930075 - symbol:Tfip11 "tuftelin interacting pro... 155 2.0e-07 1
UNIPROTKB|C0HAV3 - symbol:zgpat "Zinc finger CCCH-type wi... 154 2.1e-07 2
UNIPROTKB|A4UMC6 - symbol:TFIP11 "Tuftelin-interacting pr... 154 2.5e-07 1
UNIPROTKB|I3L834 - symbol:GPATCH2 "Uncharacterized protei... 133 2.9e-07 1
UNIPROTKB|Q5ZII9 - symbol:TFIP11 "Tuftelin-interacting pr... 153 3.0e-07 2
RGD|1311449 - symbol:Tfip11 "tuftelin interacting protein... 153 3.3e-07 1
UNIPROTKB|Q9NW75 - symbol:GPATCH2 "G patch domain-contain... 134 3.6e-07 2
UNIPROTKB|Q0IIX9 - symbol:tfip11 "Tuftelin-interacting pr... 160 4.5e-07 2
TAIR|locus:2020332 - symbol:STIPL1 "SPLICEOSOMAL TIMEKEEP... 160 7.9e-07 3
UNIPROTKB|A4UMC5 - symbol:TFIP11 "Tuftelin-interacting pr... 152 1.0e-06 2
UNIPROTKB|Q5JYG5 - symbol:GPATCH3 "G patch domain-contain... 122 1.1e-06 1
UNIPROTKB|Q5F3Y2 - symbol:GPATCH2 "Uncharacterized protei... 127 1.4e-06 2
MGI|MGI:2449939 - symbol:Zgpat "zinc finger, CCCH-type wi... 144 1.5e-06 1
FB|FBgn0032169 - symbol:CG4709 species:7227 "Drosophila m... 144 1.5e-06 1
UNIPROTKB|Q66J74 - symbol:tfip11 "Tuftelin-interacting pr... 153 1.6e-06 2
UNIPROTKB|F1PLE1 - symbol:GPATCH2 "Uncharacterized protei... 126 1.7e-06 2
ASPGD|ASPL0000028823 - symbol:AN5578 species:162425 "Emer... 146 1.7e-06 1
MGI|MGI:1915019 - symbol:Gpatch2 "G patch domain containi... 132 1.9e-06 2
UNIPROTKB|A1XD97 - symbol:TFIP11 "Tuftelin-interacting pr... 152 3.3e-06 2
POMBASE|SPAC1486.03c - symbol:SPAC1486.03c "RNA-binding s... 143 3.7e-06 1
TAIR|locus:2047319 - symbol:AT2G24830 species:3702 "Arabi... 137 3.9e-06 2
FB|FBgn0024191 - symbol:sip1 "septin interacting protein ... 143 4.0e-06 1
UNIPROTKB|F1RG71 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|Q06AK6 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|F1MR60 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|Q29RR5 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|Q9UBB9 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|A1XD93 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|A1XD94 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|A1XD95 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
UNIPROTKB|Q5R5K8 - symbol:TFIP11 "Tuftelin-interacting pr... 152 4.2e-06 2
SGD|S000004416 - symbol:SPP382 "Essential protein that fo... 140 6.7e-06 1
UNIPROTKB|I3LV51 - symbol:ZGPAT "Uncharacterized protein"... 136 1.1e-05 1
RGD|1310801 - symbol:Zgpat "zinc finger, CCCH-type with G... 136 1.1e-05 1
RGD|1562795 - symbol:Lime1 "Lck interacting transmembrane... 136 1.5e-05 1
DICTYBASE|DDB_G0274035 - symbol:stip-2 "sip1/TFIP11-like ... 134 2.0e-05 2
DICTYBASE|DDB_G0272608 - symbol:stip-1 "sip1/TFIP11-like ... 134 2.0e-05 2
UNIPROTKB|F1STR8 - symbol:GPATCH3 "Uncharacterized protei... 125 2.2e-05 2
UNIPROTKB|Q96I76 - symbol:GPATCH3 "G patch domain-contain... 124 2.2e-05 2
UNIPROTKB|G4ND86 - symbol:MGG_00288 "Uncharacterized prot... 142 2.7e-05 2
ZFIN|ZDB-GENE-040718-479 - symbol:tfip11 "tuftelin intera... 136 3.2e-05 2
UNIPROTKB|F1PAI4 - symbol:ZGPAT "Uncharacterized protein"... 131 4.0e-05 1
UNIPROTKB|Q17QX2 - symbol:ZGPAT "Zinc finger CCCH-type wi... 129 6.7e-05 1
ZFIN|ZDB-GENE-081031-96 - symbol:si:ch73-21k16.4 "si:ch73... 113 8.8e-05 2
ZFIN|ZDB-GENE-040426-1248 - symbol:zgpat "zinc finger, CC... 131 9.4e-05 2
UNIPROTKB|F1NCY9 - symbol:GPATCH3 "Uncharacterized protei... 127 9.7e-05 1
UNIPROTKB|Q8N5A5 - symbol:ZGPAT "Zinc finger CCCH-type wi... 127 0.00012 1
UNIPROTKB|C5IJB0 - symbol:ZGPAT "Zinc finger CCCH-type wi... 126 0.00014 1
UNIPROTKB|E2QTB2 - symbol:GPATCH3 "Uncharacterized protei... 124 0.00024 1
RGD|1311216 - symbol:Gpatch3 "G patch domain containing 3... 124 0.00024 1
SGD|S000005168 - symbol:SQS1 "Protein that stimulates the... 79 0.00053 3
MGI|MGI:2442492 - symbol:Gpatch3 "G patch domain containi... 123 0.00061 2
UNIPROTKB|I3L6Q0 - symbol:I3L6Q0 "Uncharacterized protein... 96 0.00069 1
>TAIR|locus:2085059 [details] [associations]
symbol:AT3G09850 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0009630
"gravitropism" evidence=RCA] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC015985 GO:GO:0003676 EMBL:AY057497
EMBL:BT000646 IPI:IPI00547828 RefSeq:NP_566359.1 UniGene:At.18729
ProteinModelPortal:Q9SF87 PaxDb:Q9SF87 PRIDE:Q9SF87
EnsemblPlants:AT3G09850.1 GeneID:820143 KEGG:ath:AT3G09850
TAIR:At3g09850 eggNOG:NOG243900 HOGENOM:HOG000077730
InParanoid:Q9SF87 OMA:VVADYME PhylomeDB:Q9SF87
ProtClustDB:CLSN2688224 Genevestigator:Q9SF87 Uniprot:Q9SF87
Length = 781
Score = 1315 (468.0 bits), Expect = 3.3e-134, P = 3.3e-134
Identities = 310/674 (45%), Positives = 396/674 (58%)
Query: 39 FVEGGLLSDWXXXXXXXLNSCSKARKXXXXXXXXXXXXXKVLAXXXXXXXXXXXAFGYQY 98
FVEGG+LSD+ S + K A + YQY
Sbjct: 52 FVEGGILSDYRKDPNFSTPSRGGS-SSGKGLRSRSIERVKASASTSGPRKCSGNTYVYQY 110
Query: 99 PSVDLKELCF--GGNDGDINLDESQPINLLGSKDSRIVAYVDQTPDL-KPQNLIYSCDYD 155
PS+D +E G + D ++ES P+ L S+ ++IVA++DQTP K + Y +Y+
Sbjct: 111 PSIDFEEGLDRRSGVESD-QMNES-PLVLGKSEATQIVAFLDQTPSSSKGIKVSYDYEYE 168
Query: 156 SSFVLGDSSHRGLGFCDDSEATPSGIDSSSKHREQQDASDSDSLSFKEEVDTDGNNNQEE 215
S+VLGD SH+GLGFCDDS+ATPSG S K Q S S + VD G N+ E
Sbjct: 169 PSYVLGDDSHKGLGFCDDSDATPSGSLSIPKALGDQGGSFSHEEE-GDAVDESGGNDDEL 227
Query: 216 VAEELPDETLS-KKKNSGFLSIGGMKLYTQDLSDEGSD----------DQSASESLHXXX 264
+PD + K++NSGF+SIGGMKLYT+D+S E SD D+S E
Sbjct: 228 ----MPDVVKTPKRRNSGFISIGGMKLYTEDVSGEESDGEEEMNDDDDDESGDEG--SSG 281
Query: 265 XXXXXXXXXXXXXXXXXXVIDEEVAEDYVEGIGGSDNVLDAKWLVEQXXXXXXXXXXXXX 324
ID++VA+DY+EGIGGS+ +LDA WL EQ
Sbjct: 282 SSELSESDSSEDMFGSYSEIDDDVAKDYLEGIGGSEIMLDAHWLAEQSLDKLDLSSDDSS 341
Query: 325 XXXXT---VEKLSGIAIQEASREYGMKKPLPLSRKKYST-GDSCS-FALDDLMFVKDPRV 379
+ KL+GI +Q+AS EYG KK +R YS G S + A+DDLMFVKDPR
Sbjct: 342 SSDSSDRKTRKLTGIRLQKASMEYGKKKT---TRSGYSGHGKSTNPLAMDDLMFVKDPRS 398
Query: 380 FSAKK---KHVAQLPQSWPREAQKSKKSRNLPGAKKKHRKEMIAVKRRERMLRRGVDLED 436
S KK K VA+ PQSWP A KSK SR+ PG KKHRKE IA+KRRERML+RGVDL D
Sbjct: 399 LSGKKNKKKEVAKFPQSWPSRAPKSKNSRSFPGENKKHRKEYIALKRRERMLQRGVDLAD 458
Query: 437 INSTLEQIVLEEVDMFSFQPMHHRDCSQVRRLAAIYRLRSDSQGSGKKRFVTVTRTQHTC 496
INS LE VLE VDM FQ MH+RDCSQVRRLA +YRL S GSGKK FVTVTRT TC
Sbjct: 459 INSQLENFVLENVDMHCFQRMHNRDCSQVRRLADVYRLSSSCNGSGKKSFVTVTRTYQTC 518
Query: 497 MPSSADRLRLEKLIGAGNEDIDFAITEGPYTKSANADRXXXXXXXXVTVHGNXXXXXXXX 556
MPS++D+LR+EKLIGAG+ED DFA++ G KS + DR
Sbjct: 519 MPSASDKLRIEKLIGAGDEDCDFAVSGGVKGKSGSLDRKKAKDSAKK--RPTREERERNK 576
Query: 557 XXXXXVAYANQPMSFVSSGILQSDSVEIRT-VDAVDINETCESK-GTVSSTQIGAFEVHT 614
+YA+QP+SFVSSGI+ S+ +T V+ V E E+ GT + IGAFEVHT
Sbjct: 577 SNGKKSSYADQPVSFVSSGIIDSEIAVAKTSVEKV-AKEVAETTPGTSNGADIGAFEVHT 635
Query: 615 KGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEFSNTDDDSARKESRSN 674
+GFGSKMMAKMG+++GGGLGKDG+G+++PIEA+QRPK LGLG++FS +D + + +N
Sbjct: 636 RGFGSKMMAKMGFIDGGGLGKDGKGIAQPIEAVQRPKSLGLGLDFSIDTEDPSPSSNNNN 695
Query: 675 SARKESRSNSAKKG 688
+A++ S+S K G
Sbjct: 696 NAKRNRSSSSGKHG 709
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVE 658
G + ++GAFE HT GFGS+MMA+MG+VEG GLG++ QG+ P+ A++RP+ G+G E
Sbjct: 722 GRIRDKRLGAFEQHTTGFGSRMMARMGFVEGSGLGRESQGIVNPLVAVRRPRARGIGAE 780
>UNIPROTKB|Q5U4Z3 [details] [associations]
symbol:zgpat "Zinc finger CCCH-type with G patch
domain-containing protein" species:8355 "Xenopus laevis"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 GO:GO:0007175 CTD:84619 EMBL:BC084897
RefSeq:NP_001088537.1 UniGene:Xl.4404 ProteinModelPortal:Q5U4Z3
GeneID:495411 KEGG:xla:495411 Xenbase:XB-GENE-6253853
Uniprot:Q5U4Z3
Length = 524
Score = 148 (57.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 597 ESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
E GT S++ G +E HT+G GSK++ +MGY G GLG++ +G +PI+A+ PK G
Sbjct: 309 EIAGTTCSSEFGGWEAHTRGIGSKLLVRMGYEFGKGLGRNAEGRVEPIQAVVLPK----G 364
Query: 657 VEFSNTDDDSARKESRSNSARKESRSNSAKKGAQNIGA 694
+ RK++ K S+ G Q GA
Sbjct: 365 KSLDQCMEIQQRKKAGGKHKHKTSKRRPKASG-QGGGA 401
Score = 56 (24.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 22/87 (25%), Positives = 34/87 (39%)
Query: 178 PSGIDSSSKHRE---QQDASDSDSLSFKEEVDT--DGNNNQEEVAEELPDETLSKKKNSG 232
P+ + S K E + +S L +E T G+ +EE EE D T K +
Sbjct: 87 PTSLSSQDKEYEAFRMAISEESQPLGSNDETSTCSKGSEEEEEEEEEEEDNTSGMKVKAP 146
Query: 233 FLSIGGMKLYTQDLSDEGSDDQSASES 259
+ S G Y + GS+ E+
Sbjct: 147 YYSTWGTLEYHNAMV-VGSEQMEDGEA 172
Score = 37 (18.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 173 DSEATP-SGIDSSSKHR--EQQDASDSDSLSFK 202
DS P G DSSS E++D + DS+ K
Sbjct: 272 DSIIPPLRGSDSSSSSSSDEEEDGAAEDSVYAK 304
>UNIPROTKB|Q28H71 [details] [associations]
symbol:zgpat "Zinc finger CCCH-type with G patch
domain-containing protein" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241375 GO:GO:0007175
CTD:84619 HOGENOM:HOG000231955 EMBL:CR761014 EMBL:BC167358
EMBL:BC171133 EMBL:BC171135 RefSeq:NP_001016444.1 UniGene:Str.2135
ProteinModelPortal:Q28H71 GeneID:549198 KEGG:xtr:549198
Xenbase:XB-GENE-6257472 Bgee:Q28H71 Uniprot:Q28H71
Length = 514
Score = 162 (62.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 598 SKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG- 656
S G+ S+Q G +E HT+G GSK++A+MGY G GLG++ +G +PI+A+ PK L
Sbjct: 299 SAGSAHSSQFGGWEAHTRGIGSKLLARMGYEIGKGLGRNAEGRVEPIQAVLLPKGKSLDQ 358
Query: 657 -VEFSNTDDDSARKESRSNSARKESRSNSA-KKGAQNIGAF 695
+E ++E ++ R + K A+N+ F
Sbjct: 359 CIEMQQRKKAGGKREHKAGKRRPRATGRGGGTKSARNVFDF 399
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 173 DSEATP-SGIDSSSKHREQQDASDSDS 198
DS P G DSSS + D + D+
Sbjct: 259 DSIIPPLRGSDSSSSDDDDDDEEEDDA 285
>MGI|MGI:1930075 [details] [associations]
symbol:Tfip11 "tuftelin interacting protein 11"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
"cell differentiation" evidence=NAS] [GO:0030198 "extracellular
matrix organization" evidence=NAS] [GO:0031214 "biomineral tissue
development" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
MGI:MGI:1930075 GO:GO:0005737 GO:GO:0030154 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0005578
GO:GO:0006397 GO:GO:0030198 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 UniGene:Mm.172947 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AF290474 EMBL:BC017682 IPI:IPI00112101
RefSeq:NP_061253.2 ProteinModelPortal:Q9ERA6 STRING:Q9ERA6
PhosphoSite:Q9ERA6 PaxDb:Q9ERA6 PRIDE:Q9ERA6
Ensembl:ENSMUST00000031288 GeneID:54723 KEGG:mmu:54723
InParanoid:Q9ERA6 NextBio:311578 Bgee:Q9ERA6 CleanEx:MM_TFIP11
Genevestigator:Q9ERA6 GermOnline:ENSMUSG00000029345 Uniprot:Q9ERA6
Length = 838
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 38/93 (40%), Positives = 52/93 (55%)
Query: 598 SKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGV 657
S GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 134 SGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGA 193
Query: 658 EFSNTDDDSARKESRSNSARKESRSNSAKKGAQ 690
S S + ++S +E+ K+ +Q
Sbjct: 194 YGSERTTQSLQDFPVADS-EEEAEEEFQKELSQ 225
>UNIPROTKB|C0HAV3 [details] [associations]
symbol:zgpat "Zinc finger CCCH-type with G patch
domain-containing protein" species:8030 "Salmo salar" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0007175 CTD:84619 EMBL:BT059459 RefSeq:NP_001167239.1
UniGene:Ssa.42847 GeneID:100380483 Uniprot:C0HAV3
Length = 527
Score = 154 (59.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 603 SSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEFSNT 662
SS+ G +E HT+G GSK+M KMGY G GLGK +G +P+ A+ PK L T
Sbjct: 306 SSSAFGGWEAHTRGIGSKLMLKMGYEYGKGLGKTSEGRVEPVLAVVLPKGKSLDQCAELT 365
Query: 663 DDDSARKESRSNSARKESRSNSAKKG-AQNIG 693
+ RK ++ ++ SR+ +K A N G
Sbjct: 366 ARKTQRKVAKGKDGQQVSRNKRTRKARAHNTG 397
Score = 43 (20.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 349 KPLPLSRK-KYSTGDSCSFALDDLMFVKDPRVF 380
KP P + K D+C F+ ++++V + R F
Sbjct: 177 KPCPFFLEDKCRFADNCRFSHGEVVYVSELREF 209
>UNIPROTKB|A4UMC6 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:13616 "Monodelphis domestica" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:EF443270 RefSeq:NP_001091078.1 UniGene:Mdm.4707
Ensembl:ENSMODT00000013666 GeneID:100010097 KEGG:mdo:100010097
Uniprot:A4UMC6
Length = 834
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEF 659
G S T G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 134 GAKSFTDFGSWERHTKGIGQKLLQKMGYVPGKGLGKNAQGIINPIEAKQRKGKGAVGAYG 193
Query: 660 SNTDDDSAR 668
S S +
Sbjct: 194 SERTTQSVQ 202
>UNIPROTKB|I3L834 [details] [associations]
symbol:GPATCH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 GO:GO:0010923 GeneTree:ENSGT00410000025698
EMBL:CU855830 Ensembl:ENSSSCT00000025633 Uniprot:I3L834
Length = 185
Score = 133 (51.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 618 GSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEFSNT 662
G++M+ MG+ G GLG+DG+G+++PI+A+QRPK LGLG T
Sbjct: 128 GNRMLQNMGWTPGSGLGRDGKGIAEPIQAMQRPKGLGLGFPLPKT 172
>UNIPROTKB|Q5ZII9 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0005578
GO:GO:0006397 GO:GO:0005681 GO:GO:0071013 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AJ720795 IPI:IPI00588712 RefSeq:NP_001025836.1
UniGene:Gga.22499 ProteinModelPortal:Q5ZII9 STRING:Q5ZII9
Ensembl:ENSGALT00000009022 GeneID:416909 KEGG:gga:416909
InParanoid:Q5ZII9 NextBio:20820302 Uniprot:Q5ZII9
Length = 827
Score = 153 (58.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 33/67 (49%), Positives = 40/67 (59%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEF 659
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 131 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYG 190
Query: 660 SNTDDDS 666
S S
Sbjct: 191 SERTSQS 197
Score = 48 (22.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 233 FLSIGGMKLYTQDLSDEGSDD 253
F+S G K +D+SDE SD+
Sbjct: 76 FISAGLKKSAAEDVSDEDSDE 96
Score = 48 (22.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 200 SFKEEV-DTDGNNNQEEVA-EELPDETLSKKKNSG 232
S E+V D D + +++ V EE+P E + KK +G
Sbjct: 84 SAAEDVSDEDSDEDEKPVKQEEIPKEFVPKKLKTG 118
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 568 PMSFVSSGILQSDSVEIRTVDA 589
P++F+S+G+ +S + ++ D+
Sbjct: 73 PVNFISAGLKKSAAEDVSDEDS 94
>RGD|1311449 [details] [associations]
symbol:Tfip11 "tuftelin interacting protein 11" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA;ISO] [GO:0031214 "biomineral tissue
development" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 RGD:1311449 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0016607 GO:GO:0005578 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 GO:GO:0071013 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:DQ342031 EMBL:BC085809 IPI:IPI00190035
RefSeq:NP_001008292.1 UniGene:Rn.161710 STRING:Q5U2Y6
PhosphoSite:Q5U2Y6 PRIDE:Q5U2Y6 Ensembl:ENSRNOT00000000828
GeneID:288718 KEGG:rno:288718 InParanoid:Q5U2Y6 NextBio:628609
Genevestigator:Q5U2Y6 Uniprot:Q5U2Y6
Length = 837
Score = 153 (58.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEF 659
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYG 194
Query: 660 SNTDDDSARKESRSNSARKESRSNSAKKGAQ 690
S S + ++S +E+ K+ +Q
Sbjct: 195 SERTTQSLQDFPVADS-EEEAEEEFQKELSQ 224
>UNIPROTKB|Q9NW75 [details] [associations]
symbol:GPATCH2 "G patch domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IDA] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 EMBL:CH471100 GO:GO:0003676
GO:GO:0010923 HOGENOM:HOG000294060 InterPro:IPR026291
PANTHER:PTHR14195 EMBL:AK001114 EMBL:AL354659 EMBL:AC096641
EMBL:BC042193 EMBL:BC063474 IPI:IPI00018019 IPI:IPI00414242
RefSeq:NP_060510.1 UniGene:Hs.420757 ProteinModelPortal:Q9NW75
IntAct:Q9NW75 PhosphoSite:Q9NW75 DMDM:48428171 PRIDE:Q9NW75
Ensembl:ENST00000366934 Ensembl:ENST00000366935 GeneID:55105
KEGG:hsa:55105 UCSC:uc001hlf.1 UCSC:uc001hlg.4 CTD:55105
GeneCards:GC01M217600 HGNC:HGNC:25499 HPA:HPA027181 HPA:HPA027322
neXtProt:NX_Q9NW75 PharmGKB:PA162390064 eggNOG:NOG300034
HOVERGEN:HBG062801 InParanoid:Q9NW75 OMA:VPWWEKE OrthoDB:EOG4WM4TR
PhylomeDB:Q9NW75 ChiTaRS:GPATCH2 GenomeRNAi:55105 NextBio:58709
Bgee:Q9NW75 CleanEx:HS_GPATCH2 Genevestigator:Q9NW75
GermOnline:ENSG00000092978 Uniprot:Q9NW75
Length = 528
Score = 134 (52.2 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 23/39 (58%), Positives = 33/39 (84%)
Query: 618 GSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
G++M+ MG+ G GLG+DG+G+S+PI+A+QRPK LGLG
Sbjct: 471 GNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
Score = 62 (26.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 188 REQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIGGMKLYTQDLS 247
R+ D + EE + + E +++ DE +S+ +S LS L+T D
Sbjct: 218 RQGPKIQDEGVVLESEETNQTNKDKMECEEQKVSDELMSESDSSS-LSSTDAGLFTNDEG 276
Query: 248 DEGSDDQS 255
+G D+QS
Sbjct: 277 RQGDDEQS 284
Score = 46 (21.3 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 169 GFCDDSEATPSGIDSSSK-HRE-----QQDASDSDS--LSFKEEVDTDGNNN 212
G C SE + S ++ SK +RE ++D SDSD L K ++ NNN
Sbjct: 85 GHCL-SEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNN 135
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 422 KRRERMLRRGVDLEDINSTLE 442
KR+ +++R+G ++D LE
Sbjct: 211 KRKLKIIRQGPKIQDEGVVLE 231
>UNIPROTKB|Q0IIX9 [details] [associations]
symbol:tfip11 "Tuftelin-interacting protein 11"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ342032
EMBL:BC121497 RefSeq:NP_001090845.1 UniGene:Str.52797 STRING:Q0IIX9
GeneID:100038256 KEGG:xtr:100038256 Xenbase:XB-GENE-984521
Uniprot:Q0IIX9
Length = 825
Score = 160 (61.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEF 659
G S+T G++E HTKG G K++ KMGYV+G GLGK+ QG+ PIEA QR K +G
Sbjct: 131 GIKSNTDFGSWERHTKGIGQKLLQKMGYVQGRGLGKNAQGIIAPIEAKQRKGKGAVGAYG 190
Query: 660 SNTDDDSARKESRSNSARKESR 681
S S + +S +E +
Sbjct: 191 SERTKQSIKDFPVVDSEEEEEK 212
Score = 39 (18.8 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 202 KEEVDTDGNNNQEEVAEELPDETLSKKKNSG 232
+E+ D+D ++ + E P + +KK +G
Sbjct: 88 EEKSDSDSDSETQARRETFPKDFEAKKLRTG 118
>TAIR|locus:2020332 [details] [associations]
symbol:STIPL1 "SPLICEOSOMAL TIMEKEEPER LOCUS1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0031981 "nuclear lumen" evidence=IDA] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 EMBL:CP002684 GO:GO:0006355 GO:GO:0003677
GO:GO:0042752 GO:GO:0005681 GO:GO:0000398 EMBL:AC007651 KO:K13103
GO:GO:0031981 HOGENOM:HOG000230470 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 OMA:MPNQEID
IPI:IPI00524892 PIR:E86306 RefSeq:NP_173150.1 UniGene:At.20092
UniGene:At.69774 PRIDE:Q9SHG6 EnsemblPlants:AT1G17070.1
GeneID:838277 KEGG:ath:AT1G17070 TAIR:At1g17070 InParanoid:Q9SHG6
PhylomeDB:Q9SHG6 ProtClustDB:CLSN2681870 Genevestigator:Q9SHG6
Uniprot:Q9SHG6
Length = 849
Score = 160 (61.4 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 39/98 (39%), Positives = 56/98 (57%)
Query: 599 KGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGV- 657
K T+ S IG FE TKG G K++ KMGY +GGGLGK+ QG+ PIEA RPK +G+G
Sbjct: 186 KNTLGS-DIGQFEKSTKGIGMKLLEKMGY-KGGGLGKNQQGIVAPIEAQLRPKNMGMGYN 243
Query: 658 EFSNTD-DDSARKESRS--NSARKESRSNSAKKGAQNI 692
+F D + E + + E+ + +G +N+
Sbjct: 244 DFKEAKLPDLKKVEEKKIIGVSVSENEQSHGDRGGKNL 281
Score = 42 (19.8 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 181 IDSSSKHREQQDASDSDSLSFKEEVDTD 208
ID S RE D D D + + +D D
Sbjct: 96 IDKDS--REHNDEKDRDKIEDNDMIDED 121
Score = 37 (18.1 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 3 GATGSRRKTSNNRNKSKQ 20
G GSRRK +R+ ++
Sbjct: 58 GGGGSRRKRRKDRDSGRK 75
>UNIPROTKB|A4UMC5 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9986 "Oryctolagus cuniculus" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 CTD:663492 EMBL:EF443269 RefSeq:NP_001093435.1
UniGene:Ocu.7148 STRING:A4UMC5 GeneID:100101578 Uniprot:A4UMC5
Length = 837
Score = 152 (58.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 44 (20.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 203 EEVDTDGNNNQEEVA--EELPDETLSKKKNSG 232
EE + D + ++E+ EELP + KK +G
Sbjct: 91 EEAELDDSEDEEKPGKQEELPKDLGPKKLKTG 122
>UNIPROTKB|Q5JYG5 [details] [associations]
symbol:GPATCH3 "G patch domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 EMBL:AL034380 GO:GO:0003676 EMBL:AL356390
UniGene:Hs.10903 HGNC:HGNC:25720 IPI:IPI00640453
Ensembl:ENST00000450844 Uniprot:Q5JYG5
Length = 128
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 597 ESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAI-QRPK-KLG 654
+ G+V Q+G FE HTKG G K+M + G+ EG GLG G+ + +++ Q P+ K G
Sbjct: 11 QEDGSVIERQVGTFERHTKGIGRKVMERQGWAEGQGLGCRCSGVPEALDSDGQHPRCKRG 70
Query: 655 LGVEFSNTDDDSARKESRSN 674
LG K R N
Sbjct: 71 LGYHGEKLQPFGQLKRPRRN 90
>UNIPROTKB|Q5F3Y2 [details] [associations]
symbol:GPATCH2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 GO:GO:0010923
GeneTree:ENSGT00410000025698 HOGENOM:HOG000294060
InterPro:IPR026291 PANTHER:PTHR14195 CTD:55105 eggNOG:NOG300034
HOVERGEN:HBG062801 OMA:VPWWEKE OrthoDB:EOG4WM4TR EMBL:AADN02012112
EMBL:AADN02012113 EMBL:AADN02012114 EMBL:AJ851518 IPI:IPI00580287
RefSeq:NP_001026217.1 UniGene:Gga.22671 Ensembl:ENSGALT00000015679
GeneID:421355 KEGG:gga:421355 InParanoid:Q5F3Y2 NextBio:20824132
Uniprot:Q5F3Y2
Length = 504
Score = 127 (49.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 618 GSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
G++M+ MG+ G GLG DG+G+++PI AIQRPK LGLG
Sbjct: 464 GNRMLQSMGWTPGTGLGPDGKGIAEPIRAIQRPKGLGLG 502
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 188 REQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIGGMKLYTQDLS 247
R+ + D + EE++ + E ++ DE +S ++S LS L+T D
Sbjct: 216 RQGPEILDEGVVIENEEMNQANKDKMEYEEQKGSDENMSDSESSS-LSSSDAGLFTNDEG 274
Query: 248 DEGSDDQS 255
+G D+QS
Sbjct: 275 RQGDDEQS 282
Score = 49 (22.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 169 GFCDDSEATPSGIDSSSK-----HREQQDASDSDS--LSFKEEVDTDGNN 211
G C SE + S ++ SSK H ++D SDSD L K ++ NN
Sbjct: 85 GHCL-SEGSDSSLEESSKDYRENHTNKKDHSDSDDQLLIAKRRPSSNLNN 133
Score = 39 (18.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 180 GIDSSSKHREQQDASDSDSLSFKEEVDTDGNNNQEE 215
G D + E S SD+ F + G++ Q +
Sbjct: 248 GSDENMSDSESSSLSSSDAGLFTNDEGRQGDDEQSD 283
>MGI|MGI:2449939 [details] [associations]
symbol:Zgpat "zinc finger, CCCH-type with G patch domain"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 MGI:MGI:2449939 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 UniGene:Mm.87720 GO:GO:0007175 EMBL:CH466626
GermOnline:ENSMUSG00000027582 EMBL:AL928965 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 OMA:AWGTLEY
HOVERGEN:HBG056371 EMBL:AK173276 EMBL:AK041491 EMBL:AK049764
EMBL:AK052236 EMBL:AK159801 EMBL:BC021513 EMBL:BC027218
IPI:IPI00123482 RefSeq:NP_001041613.1 RefSeq:NP_659143.1
UniGene:Mm.272712 ProteinModelPortal:Q8VDM1 SMR:Q8VDM1
PhosphoSite:Q8VDM1 PRIDE:Q8VDM1 Ensembl:ENSMUST00000029105
Ensembl:ENSMUST00000108807 Ensembl:ENSMUST00000116366 GeneID:229007
KEGG:mmu:229007 UCSC:uc008omb.1 InParanoid:Q69Z90 NextBio:379311
Bgee:Q8VDM1 CleanEx:MM_ZGPAT Genevestigator:Q8VDM1 Uniprot:Q8VDM1
Length = 511
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/110 (36%), Positives = 56/110 (50%)
Query: 579 SDSVEIRTVDAVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQ 638
SDS R V+ ++ GT SS G +EVHT+G GSK++ KMGY G GLG+ +
Sbjct: 284 SDSSYARVVEPSTVDT-----GTCSSAFAG-WEVHTRGIGSKLLVKMGYEFGKGLGRHAE 337
Query: 639 GMSKPIEAIQRPKKLGLGVEFSNTDDDSARKESRSNSARKESRSNSAKKG 688
G +PI A+ P+ L + R ++ SN K RS S +G
Sbjct: 338 GRVEPIHAVVLPRGKSLDQCAEILQKKTKRGQAGSNRPPKCRRSGSRPEG 387
>FB|FBgn0032169 [details] [associations]
symbol:CG4709 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00443
GO:GO:0005634 EMBL:AE014134 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 eggNOG:NOG241375
GeneTree:ENSGT00390000000732 OMA:AWGTLEY EMBL:AY058650
RefSeq:NP_609331.1 UniGene:Dm.4135 ProteinModelPortal:Q9VL59
MINT:MINT-322957 PaxDb:Q9VL59 PRIDE:Q9VL59
EnsemblMetazoa:FBtr0079884 GeneID:34324 KEGG:dme:Dmel_CG4709
UCSC:CG4709-RA FlyBase:FBgn0032169 InParanoid:Q9VL59
OrthoDB:EOG444J1N PhylomeDB:Q9VL59 ChiTaRS:CG4709 GenomeRNAi:34324
NextBio:787944 Bgee:Q9VL59 Uniprot:Q9VL59
Length = 513
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 565 ANQPMSFVSSGILQSDSVEIRTVDAVDINETCESKGTVSSTQ-IGAFEVHTKGFGSKMMA 623
+N M+ SS +SD ++ + E S T T+ +GA+E T+G GSK+M
Sbjct: 264 SNSSMNDNSSDEAESDMDDLEEARRARMVEL--SLFTFKPTERLGAWEEFTRGIGSKLME 321
Query: 624 KMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGV-----EFSNTDDDSARKESRSNSARK 678
KMGY+ G GLG DG+G+ P+ A P+ L E +N D D E + A++
Sbjct: 322 KMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELREAANGDKDYFSVERKLKRAQR 381
Query: 679 ESRSNSAK---KGAQNIGAF 695
R K + +Q + F
Sbjct: 382 RQRKADEKAYVRESQRVDVF 401
>UNIPROTKB|Q66J74 [details] [associations]
symbol:tfip11 "Tuftelin-interacting protein 11"
species:8355 "Xenopus laevis" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 KO:K13103
CTD:24144 HOVERGEN:HBG055868 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ342033 EMBL:BC081033
RefSeq:NP_001087642.1 UniGene:Xl.4331 GeneID:447466 KEGG:xla:447466
Xenbase:XB-GENE-984527 Uniprot:Q66J74
Length = 824
Score = 153 (58.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/82 (41%), Positives = 47/82 (57%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEF 659
G S+T G++E HTKG G K++ KMGY+ G GLGK+ QG+ PIEA QR K +G
Sbjct: 131 GIKSNTDFGSWERHTKGIGQKLLQKMGYMPGRGLGKNAQGIIAPIEAKQRRGKGAVGAYG 190
Query: 660 SNTDDDSARKESRSNSARKESR 681
S S + +S +E +
Sbjct: 191 SERTKQSIKDFPVVDSEEEEEK 212
Score = 41 (19.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 202 KEEVDTDGNNNQEEVAEELPDETLSKKKNSG 232
+E+ D+D ++ + E P + +KK +G
Sbjct: 88 EEKSDSDSDSETQSRRENFPKDFEAKKLRTG 118
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 233 FLSIGGMKLYTQDLSDEGSDDQSAS 257
F+S G K ++ SD SD ++ S
Sbjct: 77 FISAGIRKPAAEEKSDSDSDSETQS 101
>UNIPROTKB|F1PLE1 [details] [associations]
symbol:GPATCH2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 GeneTree:ENSGT00410000025698
InterPro:IPR026291 PANTHER:PTHR14195 CTD:55105 OMA:VPWWEKE
EMBL:AAEX03018330 EMBL:AAEX03018331 EMBL:AAEX03018332
EMBL:AAEX03018333 RefSeq:XP_545711.2 Ensembl:ENSCAFT00000017151
GeneID:488594 KEGG:cfa:488594 Uniprot:F1PLE1
Length = 528
Score = 126 (49.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 618 GSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEFSNTDDDSARKES 671
G++M+ MG+ G GLG+ G+G+++PI+A+QRPK LGLG + +A S
Sbjct: 471 GNRMLQNMGWTPGSGLGRGGKGIAEPIQALQRPKGLGLGFPLPKSTPATATPNS 524
Score = 64 (27.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 188 REQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIGGMKLYTQDLS 247
R+ D + EEV + + +++ DE +S+ +S LS L+T D
Sbjct: 218 RQGPKIQDEGVVLESEEVSQTSKDKMDYEEQKVSDELMSESDSSS-LSSTDAGLFTNDEG 276
Query: 248 DEGSDDQS 255
+G D+QS
Sbjct: 277 RQGDDEQS 284
Score = 46 (21.3 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 169 GFCDDSEATPSGIDSSSK-HRE-----QQDASDSDS--LSFKEEVDTDGNNN 212
G C SE + S ++ SK +RE ++D SDSD L K ++ NNN
Sbjct: 85 GHCL-SEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNN 135
Score = 44 (20.5 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 422 KRRERMLRRGVDLEDINSTLEQIVLEEVDMFSFQPMHHRD 461
KR+ +++R+G ++D LE EEV S M + +
Sbjct: 211 KRKLKIIRQGPKIQDEGVVLES---EEVSQTSKDKMDYEE 247
>ASPGD|ASPL0000028823 [details] [associations]
symbol:AN5578 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
EMBL:BN001305 EMBL:AACD01000096 KO:K13103 OrthoDB:EOG4K0TXN
eggNOG:NOG312699 RefSeq:XP_663182.1 EnsemblFungi:CADANIAT00003501
GeneID:2871870 KEGG:ani:AN5578.2 HOGENOM:HOG000191443 OMA:IARPSAF
Uniprot:Q5B1K2
Length = 778
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 598 SKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGV 657
S+ ++ Q + FG++M+AKMGYV+G GLG GQG+ PIEA RP+ +GLG
Sbjct: 66 SRNNNATKQSSGNGLAANSFGARMLAKMGYVQGQGLGSSGQGIVNPIEAQARPQGIGLGA 125
Query: 658 EFSNTDDDSAR-KESRSNSARKESRSNSA 685
+ +AR +E R+ + R ES S+
Sbjct: 126 VREKSK--AARTEEKRAAALRGESVEESS 152
>MGI|MGI:1915019 [details] [associations]
symbol:Gpatch2 "G patch domain containing 2" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0010923 "negative regulation
of phosphatase activity" evidence=ISO] InterPro:IPR000467
Pfam:PF01585 PROSITE:PS50174 SMART:SM00443 MGI:MGI:1915019
GO:GO:0003676 GO:GO:0010923 GeneTree:ENSGT00410000025698
HOGENOM:HOG000294060 InterPro:IPR026291 PANTHER:PTHR14195 CTD:55105
eggNOG:NOG300034 HOVERGEN:HBG062801 OMA:VPWWEKE EMBL:AK030026
EMBL:AK053781 EMBL:AK083471 EMBL:BC054810 IPI:IPI00416341
IPI:IPI00416342 IPI:IPI00416343 RefSeq:NP_080643.4
UniGene:Mm.138321 UniGene:Mm.490325 ProteinModelPortal:Q7TQC7
PhosphoSite:Q7TQC7 PRIDE:Q7TQC7 Ensembl:ENSMUST00000065573
Ensembl:ENSMUST00000110943 Ensembl:ENSMUST00000160471 GeneID:67769
KEGG:mmu:67769 UCSC:uc007dzx.2 UCSC:uc007dzy.2 InParanoid:Q7TQC7
NextBio:325513 Bgee:Q7TQC7 CleanEx:MM_GPATCH2 Genevestigator:Q7TQC7
GermOnline:ENSMUSG00000039210 Uniprot:Q7TQC7
Length = 527
Score = 132 (51.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 21/39 (53%), Positives = 33/39 (84%)
Query: 618 GSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
G++M+ MG+ G GLG+DG+G+++P++A+QRPK LGLG
Sbjct: 470 GNRMLQSMGWTPGSGLGRDGRGIAEPVQAVQRPKGLGLG 508
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 202 KEEVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIGGMKLYTQDLSDEGSDDQS 255
+ E + N ++ E E+ + L + ++ LS L+T D +G D+QS
Sbjct: 230 ESEERSQPNKDRMEYEEQKASDELRSESDTSSLSSTDAGLFTNDEGRQGDDEQS 283
>UNIPROTKB|A1XD97 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9615 "Canis lupus familiaris" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739 OMA:SMSHLYG
EMBL:DQ342030 RefSeq:NP_001073577.1 UniGene:Cfa.45002 STRING:A1XD97
Ensembl:ENSCAFT00000018663 Ensembl:ENSCAFT00000044117
Ensembl:ENSCAFT00000045711 GeneID:477530 KEGG:cfa:477530
InParanoid:A1XD97 NextBio:20852993 Uniprot:A1XD97
Length = 837
Score = 152 (58.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 39 (18.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSED 100
>POMBASE|SPAC1486.03c [details] [associations]
symbol:SPAC1486.03c "RNA-binding splicing factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISO] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 PomBase:SPAC1486.03c
GO:GO:0005737 EMBL:CU329670 GO:GO:0006355 GO:GO:0044732
GO:GO:0003677 GO:GO:0005681 GO:GO:0003723 GO:GO:0045292
GO:GO:0000390 KO:K13103 OrthoDB:EOG4K0TXN eggNOG:NOG312699
OMA:MPNQEID PIR:T50072 RefSeq:NP_594091.1
EnsemblFungi:SPAC1486.03c.1 GeneID:2542910 KEGG:spo:SPAC1486.03c
NextBio:20803948 Uniprot:Q9UTK6
Length = 797
Score = 143 (55.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 30/102 (29%), Positives = 56/102 (54%)
Query: 587 VDAVDINETCESKGTVSSTQ-IGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIE 645
++A I + VS + I + +T GFG+KM+ KMGY +G GLG + +G+++P++
Sbjct: 87 LEAHSIPQLKNKNDEVSQAKNIPKMKFNTTGFGAKMLEKMGYKQGQGLGANAEGIAEPVQ 146
Query: 646 AIQRPKKLGLGVEFSNTDDDSARKESRSNSARKESRSNSAKK 687
+ RP+++GLG T+ +R + E ++ K+
Sbjct: 147 SKLRPERVGLGAVRERTEKQRKEAIARGEISDSEDEKHTVKQ 188
>TAIR|locus:2047319 [details] [associations]
symbol:AT2G24830 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AC006585 EMBL:AK229189
IPI:IPI00541583 PIR:A84641 RefSeq:NP_180056.1 UniGene:At.22189
UniGene:At.69630 ProteinModelPortal:Q9SK49 SMR:Q9SK49
EnsemblPlants:AT2G24830.1 GeneID:817020 KEGG:ath:AT2G24830
TAIR:At2g24830 eggNOG:NOG241375 HOGENOM:HOG000239565
InParanoid:Q9SK49 OMA:GYREGMG PhylomeDB:Q9SK49
ProtClustDB:CLSN2683135 Genevestigator:Q9SK49 Uniprot:Q9SK49
Length = 497
Score = 137 (53.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 34/91 (37%), Positives = 46/91 (50%)
Query: 599 KGTVSSTQIGA-FEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGV 657
+G + T + A +E HT+G SKMMA MGY EG GLG GQG+ PI P K L
Sbjct: 284 RGVQTDTALFAKWENHTRGIASKMMASMGYREGMGLGVSGQGILNPILVKVLPAKRSLDY 343
Query: 658 EFSNTDDDSARKESRSNSARKESRSNSAKKG 688
+ + + E + +K SR K+G
Sbjct: 344 ALEHIRNGECKSEKQK---KKRSRGGKRKRG 371
Score = 48 (22.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 16/68 (23%), Positives = 29/68 (42%)
Query: 167 GLGFCDDSEATPSGIDSSSKHREQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLS 226
G+ F DD + G DS + Q D +E+ +++++ V+ + DE
Sbjct: 213 GVVFRDDKSSAKLGSDSLALSEYAQMTDDDGEEEEEEDEQQSASDSEDSVSSDY-DE--G 269
Query: 227 KKKNSGFL 234
+ GFL
Sbjct: 270 SPQGIGFL 277
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 173 DSEATPSGIDSSSKHREQQDASDSDSLS-FKEEVDTDGNNNQEE 215
D E G+ + SDS +LS + + D DG +EE
Sbjct: 206 DDELQVGGVVFRDDKSSAKLGSDSLALSEYAQMTDDDGEEEEEE 249
>FB|FBgn0024191 [details] [associations]
symbol:sip1 "septin interacting protein 1" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 EMBL:AE014134 GO:GO:0006355
GO:GO:0003677 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 CTD:66603
KO:K13103 eggNOG:NOG312699 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AF221101 EMBL:AF145670 RefSeq:NP_524725.2
UniGene:Dm.1847 IntAct:Q9Y103 MINT:MINT-302413 PaxDb:Q9Y103
PRIDE:Q9Y103 EnsemblMetazoa:FBtr0079134 GeneID:44238
KEGG:dme:Dmel_CG7238 FlyBase:FBgn0024191 InParanoid:Q9Y103
OrthoDB:EOG4PVMDM PhylomeDB:Q9Y103 GenomeRNAi:44238 NextBio:837003
Bgee:Q9Y103 Uniprot:Q9Y103
Length = 839
Score = 143 (55.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 575 GILQSDSVEIR-TVDAVDINETCESKGTVSSTQ-IGAFEVHTKGFGSKMMAKMGYVEGGG 632
G S S E R T+ + T + + ++S + +GA+E HT+G G+K++ +MGY G G
Sbjct: 126 GSSNSSSEEERPTLSRKQPSTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKG 185
Query: 633 LGKDGQGMSKPIEAIQRPKKLGLGVEFSNTDDDSARKESRSNSARKESRSNSAKKGAQN 691
LGKD QG+S P++A R + +G T K ++S ++ R K N
Sbjct: 186 LGKDLQGISHPVQAHVRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLN 244
>UNIPROTKB|F1RG71 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0071013 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706
GeneTree:ENSGT00390000012739 OMA:SMSHLYG EMBL:CT841533
Ensembl:ENSSSCT00000010917 Uniprot:F1RG71
Length = 835
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|Q06AK6 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9823 "Sus scrofa" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031214
"biomineral tissue development" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681
GO:GO:0031214 KO:K13103 eggNOG:NOG312699 HOGENOM:HOG000230470
HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ923315
RefSeq:NP_001070682.1 UniGene:Ssc.23477 STRING:Q06AK6 PRIDE:Q06AK6
GeneID:768099 KEGG:ssc:768099 CTD:663492 Uniprot:Q06AK6
Length = 836
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|F1MR60 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0071013 KO:K13103
RefSeq:NP_001039495.2 UniGene:Bt.56280 GeneID:509349
KEGG:bta:509349 CTD:24144 NextBio:20868933 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706
GeneTree:ENSGT00390000012739 OMA:SMSHLYG EMBL:DAAA02045526
EMBL:DAAA02045527 IPI:IPI01017463 Ensembl:ENSBTAT00000016296
Ensembl:ENSBTAT00000052574 Uniprot:F1MR60
Length = 837
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|Q29RR5 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9913 "Bos taurus" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031214
"biomineral tissue development" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681
GO:GO:0031214 KO:K13103 EMBL:DQ342029 EMBL:BC114058 IPI:IPI00824913
RefSeq:NP_001039495.2 UniGene:Bt.56280 STRING:Q29RR5 PRIDE:Q29RR5
GeneID:509349 KEGG:bta:509349 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InParanoid:Q29RR5
OrthoDB:EOG4BRWK2 NextBio:20868933 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 Uniprot:Q29RR5
Length = 837
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|Q9UBB9 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031214 "biomineral tissue development"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0006396 "RNA processing"
evidence=IC] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 EMBL:CH471095 GO:GO:0016607 GO:GO:0005578
GO:GO:0031214 GO:GO:0000398 GO:GO:0071013 EMBL:Z99714 EMBL:Z95115
KO:K13103 CTD:24144 eggNOG:NOG312699 HOGENOM:HOG000230470
HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 OMA:SMSHLYG
EMBL:AF070662 EMBL:AL080147 EMBL:AL050258 EMBL:BT007274
EMBL:CT841511 EMBL:BC011599 IPI:IPI00015924 IPI:IPI00220893
PIR:T12531 RefSeq:NP_001008697.1 RefSeq:NP_036275.1
UniGene:Hs.20225 ProteinModelPortal:Q9UBB9 IntAct:Q9UBB9
STRING:Q9UBB9 PhosphoSite:Q9UBB9 DMDM:22096235 PaxDb:Q9UBB9
PeptideAtlas:Q9UBB9 PRIDE:Q9UBB9 DNASU:24144
Ensembl:ENST00000405938 Ensembl:ENST00000407148
Ensembl:ENST00000407431 Ensembl:ENST00000407690 GeneID:24144
KEGG:hsa:24144 UCSC:uc003acq.2 UCSC:uc003acr.2
GeneCards:GC22M026887 HGNC:HGNC:17165 HPA:HPA027085 MIM:612747
neXtProt:NX_Q9UBB9 PharmGKB:PA38441 InParanoid:Q9UBB9
PhylomeDB:Q9UBB9 ChiTaRS:TFIP11 GenomeRNAi:24144 NextBio:46829
ArrayExpress:Q9UBB9 Bgee:Q9UBB9 CleanEx:HS_TFIP11
Genevestigator:Q9UBB9 GermOnline:ENSG00000100109 Uniprot:Q9UBB9
Length = 837
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|A1XD93 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9598 "Pan troglodytes" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739 OMA:SMSHLYG
EMBL:DQ342026 RefSeq:NP_001073621.1 UniGene:Ptr.6572 STRING:A1XD93
PRIDE:A1XD93 Ensembl:ENSPTRT00000026524 GeneID:458725
KEGG:ptr:458725 InParanoid:A1XD93 NextBio:20839105 Uniprot:A1XD93
Length = 837
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|A1XD94 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9544 "Macaca mulatta" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 OMA:SMSHLYG EMBL:DQ342027 RefSeq:NP_001073589.1
UniGene:Mmu.14330 STRING:A1XD94 Ensembl:ENSMMUT00000032991
GeneID:712691 KEGG:mcc:712691 NextBio:19980789 Uniprot:A1XD94
Length = 837
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|A1XD95 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9541 "Macaca fascicularis" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 HOVERGEN:HBG055868
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342028 EMBL:AB168161 Uniprot:A1XD95
Length = 837
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>UNIPROTKB|Q5R5K8 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9601 "Pongo abelii" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:CR860850
RefSeq:NP_001126744.1 UniGene:Pab.18632 GeneID:100173746
KEGG:pon:100173746 InParanoid:Q5R5K8 Uniprot:Q5R5K8
Length = 837
Score = 152 (58.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
GT S G++E HTKG G K++ KMGYV G GLGK+ QG+ PIEA QR K +G
Sbjct: 135 GTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVD 591
P++F+S+G+ + + E D+ D
Sbjct: 77 PVNFISAGLKKGAAEEAELEDSDD 100
>SGD|S000004416 [details] [associations]
symbol:SPP382 "Essential protein that forms a dimer with
Ntr2p" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000390 "spliceosomal complex
disassembly" evidence=IGI;IMP;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0071008 "U2-type post-mRNA release spliceosomal
complex" evidence=IMP;IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IEA;IDA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000349 "generation of catalytic spliceosome for first
transesterification step" evidence=IMP] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IPI] [GO:0003723 "RNA binding"
evidence=ISS] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 SGD:S000004416 GO:GO:0005739 EMBL:BK006945
GO:GO:0003723 EMBL:U20939 GO:GO:0000349 GO:GO:0071008 GO:GO:0000390
PIR:S53411 RefSeq:NP_013528.1 ProteinModelPortal:Q06411
DIP:DIP-1491N IntAct:Q06411 MINT:MINT-403663 STRING:Q06411
PaxDb:Q06411 EnsemblFungi:YLR424W GeneID:851143 KEGG:sce:YLR424W
CYGD:YLR424w eggNOG:KOG2184 HOGENOM:HOG000067729 KO:K13103
OMA:LYQWHLY OrthoDB:EOG4K0TXN NextBio:967907 Genevestigator:Q06411
Uniprot:Q06411
Length = 708
Score = 140 (54.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 614 TKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPK-KLGLGVEFSNTDDDSARKES 671
T G G+K+++ MGYV G GLGKDG G++ PIE RP GLG+ FSNT+ + E+
Sbjct: 61 TYGIGAKLLSSMGYVAGKGLGKDGSGITTPIETQSRPMHNAGLGM-FSNTNSSNYHSEN 118
>UNIPROTKB|I3LV51 [details] [associations]
symbol:ZGPAT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174
SMART:SM00356 SMART:SM00443 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0007175
GeneTree:ENSGT00390000000732 OMA:AWGTLEY Ensembl:ENSSSCT00000029862
Uniprot:I3LV51
Length = 488
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 568 PMSFVSSGILQSDSVEIRTVD-AVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMG 626
P+ +G SD+ + A + + S GT S G +EVHT+G GSK++AKMG
Sbjct: 243 PLRTEPTGSSDSDNSDADDPSYARXVEPSAASPGTCSPAFAG-WEVHTRGIGSKLLAKMG 301
Query: 627 YVEGGGLGKDGQGMSKPIEAIQRPK 651
Y G GLG+ +G +PI A+ P+
Sbjct: 302 YELGKGLGRQAEGRVEPIHAVVLPR 326
>RGD|1310801 [details] [associations]
symbol:Zgpat "zinc finger, CCCH-type with G patch domain"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;ISS] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 RGD:1310801 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG241375 GO:GO:0007175 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 EMBL:BC087720
IPI:IPI00196430 RefSeq:NP_001009656.1 UniGene:Rn.8219
Ensembl:ENSRNOT00000019084 GeneID:296478 KEGG:rno:296478
UCSC:RGD:1310801 NextBio:641268 ArrayExpress:Q5PPF5
Genevestigator:Q5PPF5 Uniprot:Q5PPF5
Length = 507
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 579 SDSVEIRTVDAVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQ 638
SDS R V+A T ++ GT SS G +EVHT+G GSK++ KMGY G GLG+ +
Sbjct: 280 SDSSYARVVEA----NTVDT-GTCSSAFAG-WEVHTRGIGSKLLVKMGYEFGKGLGRHAE 333
Query: 639 GMSKPIEAIQRPK 651
G +PI A+ P+
Sbjct: 334 GRVEPIHAVVLPR 346
>RGD|1562795 [details] [associations]
symbol:Lime1 "Lck interacting transmembrane adaptor 1"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0014066 "regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0019815 "B
cell receptor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0042345 "regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043405 "regulation of
MAP kinase activity" evidence=ISO] [GO:0050853 "B cell receptor
signaling pathway" evidence=ISO] [GO:0051279 "regulation of release
of sequestered calcium ion into cytosol" evidence=ISO]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 RGD:1562795
GO:GO:0005634 GO:GO:0045892 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0007175 IPI:IPI00567000
Ensembl:ENSRNOT00000046276 UCSC:RGD:1562795 ArrayExpress:F1LW37
Uniprot:F1LW37
Length = 610
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 579 SDSVEIRTVDAVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQ 638
SDS R V+A T ++ GT SS G +EVHT+G GSK++ KMGY G GLG+ +
Sbjct: 302 SDSSYARVVEA----NTVDT-GTCSSAFAG-WEVHTRGIGSKLLVKMGYEFGKGLGRHAE 355
Query: 639 GMSKPIEAIQRPK 651
G +PI A+ P+
Sbjct: 356 GRVEPIHAVVLPR 368
>DICTYBASE|DDB_G0274035 [details] [associations]
symbol:stip-2 "sip1/TFIP11-like interaction protein"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 dictyBase:DDB_G0274035
dictyBase:DDB_G0272608 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681
EMBL:AAFI02000011 EMBL:AAFI02000009 KO:K13103 eggNOG:NOG312699
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342053 RefSeq:XP_644376.2
RefSeq:XP_645037.2 EnsemblProtists:DDB0233563
EnsemblProtists:DDB0266882 GeneID:8618714 GeneID:8619262
KEGG:ddi:DDB_G0272608 KEGG:ddi:DDB_G0274035 OMA:MPNQEID
ProtClustDB:CLSZ2431084 Uniprot:A1XDC0
Length = 894
Score = 134 (52.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 616 GFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG------VEFSNTDDDSARK 669
G G+ +++KMGY GGLG+DG GM +PI+ RPK GL V S+ DDS +
Sbjct: 151 GIGAALLSKMGYKGTGGLGRDGGGMVEPIKVQVRPKNAGLASVTELNVNSSDDSDDSDQS 210
Query: 670 ESRSNSARKESRSNSAKK 687
E ++S + RS KK
Sbjct: 211 EGDTDSDNENKRSLGWKK 228
Score = 51 (23.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 20/87 (22%), Positives = 34/87 (39%)
Query: 168 LGFCDDSEATPSGIDSSSKHREQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLSK 227
+GF P+ +K E D D D K++ Q++ ++ E +K
Sbjct: 63 VGFVASGIYEPNEHKLKNKDGENIDNDDDDGEEKKKKKKEKKEKKQKKKEKKEKKEKKNK 122
Query: 228 KKNSGFLSIGGMKLYTQDLSDEGSDDQ 254
KKN GG Y +D+ +D+
Sbjct: 123 KKNK--YGGGGGNNYDDSDNDKSIEDK 147
Score = 45 (20.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 397 EAQKSKKSRNLPGAKKKHRKEMIAVKRRER 426
E +K KK + KKK +KE K +++
Sbjct: 95 EKKKKKKEKKEKKQKKKEKKEKKEKKNKKK 124
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVDIN 593
P+ FV+SGI + + +++ D +I+
Sbjct: 62 PVGFVASGIYEPNEHKLKNKDGENID 87
Score = 37 (18.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 396 REAQKSKKSRNLPGAKKKHRKE 417
++ +K KK + +KK +KE
Sbjct: 97 KKKKKEKKEKKQKKKEKKEKKE 118
>DICTYBASE|DDB_G0272608 [details] [associations]
symbol:stip-1 "sip1/TFIP11-like interaction protein"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 dictyBase:DDB_G0274035
dictyBase:DDB_G0272608 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681
EMBL:AAFI02000011 EMBL:AAFI02000009 KO:K13103 eggNOG:NOG312699
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342053 RefSeq:XP_644376.2
RefSeq:XP_645037.2 EnsemblProtists:DDB0233563
EnsemblProtists:DDB0266882 GeneID:8618714 GeneID:8619262
KEGG:ddi:DDB_G0272608 KEGG:ddi:DDB_G0274035 OMA:MPNQEID
ProtClustDB:CLSZ2431084 Uniprot:A1XDC0
Length = 894
Score = 134 (52.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 616 GFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG------VEFSNTDDDSARK 669
G G+ +++KMGY GGLG+DG GM +PI+ RPK GL V S+ DDS +
Sbjct: 151 GIGAALLSKMGYKGTGGLGRDGGGMVEPIKVQVRPKNAGLASVTELNVNSSDDSDDSDQS 210
Query: 670 ESRSNSARKESRSNSAKK 687
E ++S + RS KK
Sbjct: 211 EGDTDSDNENKRSLGWKK 228
Score = 51 (23.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 20/87 (22%), Positives = 34/87 (39%)
Query: 168 LGFCDDSEATPSGIDSSSKHREQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLSK 227
+GF P+ +K E D D D K++ Q++ ++ E +K
Sbjct: 63 VGFVASGIYEPNEHKLKNKDGENIDNDDDDGEEKKKKKKEKKEKKQKKKEKKEKKEKKNK 122
Query: 228 KKNSGFLSIGGMKLYTQDLSDEGSDDQ 254
KKN GG Y +D+ +D+
Sbjct: 123 KKNK--YGGGGGNNYDDSDNDKSIEDK 147
Score = 45 (20.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 397 EAQKSKKSRNLPGAKKKHRKEMIAVKRRER 426
E +K KK + KKK +KE K +++
Sbjct: 95 EKKKKKKEKKEKKQKKKEKKEKKEKKNKKK 124
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 568 PMSFVSSGILQSDSVEIRTVDAVDIN 593
P+ FV+SGI + + +++ D +I+
Sbjct: 62 PVGFVASGIYEPNEHKLKNKDGENID 87
Score = 37 (18.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 396 REAQKSKKSRNLPGAKKKHRKE 417
++ +K KK + +KK +KE
Sbjct: 97 KKKKKEKKEKKQKKKEKKEKKE 118
>UNIPROTKB|F1STR8 [details] [associations]
symbol:GPATCH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 CTD:63906 OMA:DDRGEEW GeneTree:ENSGT00390000004191
EMBL:FP015947 RefSeq:XP_003127767.2 UniGene:Ssc.27126
Ensembl:ENSSSCT00000003958 GeneID:100526056 KEGG:ssc:100526056
Uniprot:F1STR8
Length = 520
Score = 125 (49.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 580 DSVEIRTVDAVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQG 639
DSV++R + + G+V Q+G FE HTKG G K+M + G+ EG GLG G
Sbjct: 374 DSVQMRLEQRL---RDGQEAGSVIRHQVGTFERHTKGIGRKVMERQGWAEGQGLGSQCSG 430
Query: 640 MSKPIEAI-QRPK-KLGLG 656
+ + +++ Q P+ K GLG
Sbjct: 431 VPEALDSDGQHPRCKRGLG 449
Score = 54 (24.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/101 (26%), Positives = 43/101 (42%)
Query: 169 GFC-DDSEATPSGIDSSSKHREQQDASDSDSLSFK-EEVDT-----DGNNNQEEVAEELP 221
G C D A+P G + +E+++ S SD + EE + + QE E L
Sbjct: 257 GTCLADVLASPCGEVEEEREKEEEEESHSDDDDDRGEEWERHEALHEDVTRQERTTERLF 316
Query: 222 DETLSKKKNSGFLSIGGMKLYTQDL---SDEGS-DDQSASE 258
+E + K G G+ YT +EG D+Q+A +
Sbjct: 317 EEEIELKWEKGG---SGLVFYTDAQFWQEEEGDFDEQTADD 354
>UNIPROTKB|Q96I76 [details] [associations]
symbol:GPATCH3 "G patch domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
EMBL:AL034380 GO:GO:0003676 EMBL:AK022517 EMBL:AL833886
EMBL:AL356390 EMBL:BC007767 IPI:IPI00514759 RefSeq:NP_071361.2
UniGene:Hs.10903 ProteinModelPortal:Q96I76 IntAct:Q96I76
DMDM:57012858 PaxDb:Q96I76 PRIDE:Q96I76 DNASU:63906
Ensembl:ENST00000361720 GeneID:63906 KEGG:hsa:63906 UCSC:uc001bne.3
CTD:63906 GeneCards:GC01M027216 H-InvDB:HIX0199819 HGNC:HGNC:25720
HPA:HPA032078 neXtProt:NX_Q96I76 PharmGKB:PA162390065
eggNOG:NOG68693 HOGENOM:HOG000231150 HOVERGEN:HBG051825
InParanoid:Q96I76 OMA:DDRGEEW GenomeRNAi:63906 NextBio:65618
ArrayExpress:Q96I76 Bgee:Q96I76 CleanEx:HS_GPATCH3
Genevestigator:Q96I76 GermOnline:ENSG00000198746 Uniprot:Q96I76
Length = 525
Score = 124 (48.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 33/97 (34%), Positives = 48/97 (49%)
Query: 580 DSVEIRTVDAVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQG 639
DSV++R + + G+V Q+G FE HTKG G K+M + G+ EG GLG G
Sbjct: 379 DSVQMRLEQRL---RDGQEDGSVIERQVGTFERHTKGIGRKVMERQGWAEGQGLGCRCSG 435
Query: 640 MSKPIEAI-QRPK-KLGLGVEFSNTDDDSARKESRSN 674
+ + +++ Q P+ K GLG K R N
Sbjct: 436 VPEALDSDGQHPRCKRGLGYHGEKLQPFGQLKRPRRN 472
Score = 55 (24.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 161 GDSSHRGLGFCDDSEATPSGI--DSSSKHREQQDASDSDSLSFKE----EVDTDGNNNQE 214
G+ +G + D A+P G + K E++ SD D +E E + QE
Sbjct: 256 GEEIPQGT-YLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQE 314
Query: 215 EVAEELPDETLSKKKNSGFLSIGGMKLYTQDL---SDEGS-DDQSASE 258
E+L +E + K G G+ YT +EG D+Q+A +
Sbjct: 315 RTTEQLFEEEIELKWEKGG---SGLVFYTDAQFWQEEEGDFDEQTADD 359
>UNIPROTKB|G4ND86 [details] [associations]
symbol:MGG_00288 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005634
GO:GO:0006355 EMBL:CM001235 GO:GO:0003677 KO:K13103
InterPro:IPR022159 Pfam:PF12457 RefSeq:XP_003718808.1
EnsemblFungi:MGG_00288T0 GeneID:2674376 KEGG:mgr:MGG_00288
Uniprot:G4ND86
Length = 960
Score = 142 (55.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 617 FGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGV--EFSNTDDDSARKESRS- 673
FG++MMAKMGY EG GLG +GQG + IEA RP++ GLGV E + T+ ++++R
Sbjct: 242 FGARMMAKMGYTEGTGLGAEGQGRNVIIEANLRPQRAGLGVVREKTETERQEEKRQARMR 301
Query: 674 -----NSARKESRSNSAKK 687
+S +E + +A+K
Sbjct: 302 GEVVVDSDEEEKKRKAARK 320
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 165 HRGLGFCDDSEATPSGIDSSSKHREQ 190
H+G+ F ++A SG D ++
Sbjct: 91 HKGVAFVSSNDAKKSGDDDEDDDEDE 116
>ZFIN|ZDB-GENE-040718-479 [details] [associations]
symbol:tfip11 "tuftelin interacting protein 11"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 ZFIN:ZDB-GENE-040718-479 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 EMBL:BC075755 EMBL:BC096995
IPI:IPI00513582 RefSeq:NP_001002721.1 UniGene:Dr.7492 STRING:Q6DI35
GeneID:436994 KEGG:dre:436994 InParanoid:Q6DI35 NextBio:20831412
ArrayExpress:Q6DI35 Uniprot:Q6DI35
Length = 832
Score = 136 (52.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEF 659
G + +G +E HT+G G K++ KMGYV G GLGK+ QG+ PIEA R K +G
Sbjct: 134 GIRTGQDLGNWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIEAKLRKGKGAVGAYG 193
Query: 660 SNTDDDSARKESRSNSARKESRSNSAKKG 688
S S + +S +E + G
Sbjct: 194 SERTQQSLQDFPVVDSEEEEEEEFQKELG 222
Score = 46 (21.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 233 FLSIGGMKLYTQDLSD-EGSDDQSASES 259
F+S G K ++ ++ EGSDD A E+
Sbjct: 80 FVSAGLRKTAAEEKAEREGSDDSDAEEA 107
Score = 37 (18.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 568 PMSFVSSGILQSDSVE 583
P+SFVS+G+ ++ + E
Sbjct: 77 PVSFVSAGLRKTAAEE 92
>UNIPROTKB|F1PAI4 [details] [associations]
symbol:ZGPAT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174
SMART:SM00356 SMART:SM00443 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00390000000732 OMA:AWGTLEY EMBL:AAEX03014164
Ensembl:ENSCAFT00000020709 Uniprot:F1PAI4
Length = 513
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 592 INETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPK 651
+ + GT SS G +EVHT+G GS+++AKMGY G GLG+ +G +PI A+ P+
Sbjct: 296 VEPSAAEPGTCSSAFAG-WEVHTRGIGSRLLAKMGYEFGKGLGRHAEGRVEPIHAVVLPR 354
>UNIPROTKB|Q17QX2 [details] [associations]
symbol:ZGPAT "Zinc finger CCCH-type with G patch
domain-containing protein" species:9913 "Bos taurus" [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585
PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356 SMART:SM00443
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241375
GO:GO:0007175 EMBL:BC118131 IPI:IPI00782903 RefSeq:NP_001019685.2
UniGene:Bt.22848 ProteinModelPortal:Q17QX2
Ensembl:ENSBTAT00000045200 GeneID:510866 KEGG:bta:510866 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 InParanoid:Q17QX2
OMA:AWGTLEY OrthoDB:EOG4J6RR2 NextBio:20869657 ArrayExpress:Q17QX2
Uniprot:Q17QX2
Length = 513
Score = 129 (50.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPK 651
GT SS G +EVHT+G GS+++AKMGY G GLG+ +G +P+ A+ P+
Sbjct: 302 GTCSSAFAG-WEVHTRGIGSRLLAKMGYEFGKGLGRHAEGRVEPVHAVVLPR 352
>ZFIN|ZDB-GENE-081031-96 [details] [associations]
symbol:si:ch73-21k16.4 "si:ch73-21k16.4"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 ZFIN:ZDB-GENE-081031-96 GO:GO:0003676
GeneTree:ENSGT00410000025698 InterPro:IPR026291 PANTHER:PTHR14195
CTD:55105 OrthoDB:EOG4WM4TR EMBL:BX004824 EMBL:CU571074
IPI:IPI01006997 RefSeq:XP_003200809.1 Ensembl:ENSDART00000136646
GeneID:555214 KEGG:dre:555214 Uniprot:F6NLS1
Length = 490
Score = 113 (44.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 603 SSTQIG--AFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLG 656
SS +G A + G++M+ MG+ G GLG +G+G+++PI A QRPK GLG
Sbjct: 433 SSGVVGESAAPLPDSNLGNRMLQSMGWTPGTGLGPEGRGITEPIRASQRPKGAGLG 488
Score = 60 (26.2 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 189 EQQDASDS--DSLSFKEEVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIGGMKLYTQDL 246
E ++A S D + F+E+ +D EE+++ ET S NS S GG LYT D
Sbjct: 230 ESEEAGHSLKDKMDFEEQKGSD-----EEMSDRC--ET-SSVSNS---SDGG--LYTNDE 276
Query: 247 SDEGSDDQS 255
+G D+QS
Sbjct: 277 GRQGDDEQS 285
>ZFIN|ZDB-GENE-040426-1248 [details] [associations]
symbol:zgpat "zinc finger, CCCH-type with G patch
domain" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00443
ZFIN:ZDB-GENE-040426-1248 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG241375 HSSP:Q9UPT8 GO:GO:0007175 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 OMA:AWGTLEY
OrthoDB:EOG4J6RR2 EMBL:BC055224 IPI:IPI00501007 RefSeq:NP_956779.1
UniGene:Dr.8874 ProteinModelPortal:Q7SXW2 PRIDE:Q7SXW2
Ensembl:ENSDART00000037474 Ensembl:ENSDART00000129352 GeneID:393457
KEGG:dre:393457 InParanoid:Q7SXW2 NextBio:20814493 Bgee:Q7SXW2
Uniprot:Q7SXW2
Length = 504
Score = 131 (51.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 597 ESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPK--KLG 654
E V++ + +E HT+G GSK++ KMGY G GLGK G +P++A+ PK L
Sbjct: 291 EDLAQVNTAEFCGWEAHTRGIGSKLLMKMGYELGKGLGKTLSGRVEPVQAVVLPKGHSLD 350
Query: 655 LGVEFSNTDDDSA-RKESRSNSARKESRSNSAKKGAQNIGAF 695
+ E + +A K + ++ RK + ++ N+ F
Sbjct: 351 ICAELTQRKTAAAIAKNNPTSHKRKAKKKKASTSTRHNVFDF 392
Score = 41 (19.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 197 DSLSFKEEVDTDGNNNQEE 215
DS K DTD N +EE
Sbjct: 98 DSNEVKPNPDTDEENEEEE 116
Score = 37 (18.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 190 QQDASDSDSLSFKEEVDTDG 209
Q D S S S +++ + DG
Sbjct: 261 QDDVSSSSSSDSEDDAECDG 280
>UNIPROTKB|F1NCY9 [details] [associations]
symbol:GPATCH3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 OMA:DDRGEEW GeneTree:ENSGT00390000004191
EMBL:AADN02051291 EMBL:AADN02051292 IPI:IPI00595804
Ensembl:ENSGALT00000001295 Uniprot:F1NCY9
Length = 474
Score = 127 (49.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAI-QRPK-KLGLG 656
G+ S QIG FE +TKGFG K++ + G+ EG GLG + GM++ ++ Q P+ K GLG
Sbjct: 344 GSTSRQQIGTFERYTKGFGRKVLEQQGWTEGLGLGSNNSGMAEALDNEGQNPRCKRGLG 402
>UNIPROTKB|Q8N5A5 [details] [associations]
symbol:ZGPAT "Zinc finger CCCH-type with G patch
domain-containing protein" species:9606 "Homo sapiens" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 GO:GO:0005634
EMBL:CH471077 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL121845
eggNOG:NOG241375 GO:GO:0007175 CTD:84619 OMA:AWGTLEY
OrthoDB:EOG4J6RR2 EMBL:AB058750 EMBL:AK027878 EMBL:AK074961
EMBL:BC019338 EMBL:BC032612 IPI:IPI00553175 IPI:IPI00641397
IPI:IPI00719070 RefSeq:NP_001076582.1 RefSeq:NP_001182582.1
RefSeq:NP_001182583.1 RefSeq:NP_115916.3 RefSeq:NP_852150.2
UniGene:Hs.590868 ProteinModelPortal:Q8N5A5 SMR:Q8N5A5
IntAct:Q8N5A5 STRING:Q8N5A5 PhosphoSite:Q8N5A5 DMDM:147744602
PaxDb:Q8N5A5 PRIDE:Q8N5A5 DNASU:84619 Ensembl:ENST00000328969
Ensembl:ENST00000355969 Ensembl:ENST00000357119
Ensembl:ENST00000369967 Ensembl:ENST00000431125
Ensembl:ENST00000448100 GeneID:84619 KEGG:hsa:84619 UCSC:uc002ygi.2
UCSC:uc002ygk.3 UCSC:uc002ygm.3 GeneCards:GC20P062338
H-InvDB:HIX0138076 HGNC:HGNC:15948 HPA:HPA043248 neXtProt:NX_Q8N5A5
PharmGKB:PA134881248 HOVERGEN:HBG056371 InParanoid:Q8N5A5
PhylomeDB:Q8N5A5 ChiTaRS:ZGPAT GenomeRNAi:84619 NextBio:74496
ArrayExpress:Q8N5A5 Bgee:Q8N5A5 CleanEx:HS_ZGPAT
Genevestigator:Q8N5A5 GermOnline:ENSG00000197114 Uniprot:Q8N5A5
Length = 531
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 31/91 (34%), Positives = 45/91 (49%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEF 659
GT SS G +EVHT+G GS+++ KMGY G GLG+ +G +PI A+ P+ L +
Sbjct: 320 GTCSSAFAG-WEVHTRGIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLD-QC 377
Query: 660 SNTDDDSARKESRSNSARKESRSNSAKKGAQ 690
T R + R A+ G +
Sbjct: 378 VETLQKQTRVGKAGTNKPPRCRGRGARPGGR 408
>UNIPROTKB|C5IJB0 [details] [associations]
symbol:ZGPAT "Zinc finger CCCH-type with G patch
domain-containing protein" species:9940 "Ovis aries" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0007175 CTD:84619 EMBL:FJ943995 RefSeq:NP_001155206.1
UniGene:Oar.9037 GeneID:100302028 Uniprot:C5IJB0
Length = 513
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 600 GTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPK 651
GT SS G +EVHT+G GS+++AKMGY G GLG+ G +P+ A+ P+
Sbjct: 302 GTCSSAFAG-WEVHTRGIGSRLLAKMGYEFGKGLGRRADGRVEPVHAVVLPR 352
>UNIPROTKB|E2QTB2 [details] [associations]
symbol:GPATCH3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 CTD:63906 OMA:DDRGEEW
GeneTree:ENSGT00390000004191 EMBL:AAEX03001717 RefSeq:XP_544476.2
Ensembl:ENSCAFT00000019482 GeneID:487350 KEGG:cfa:487350
NextBio:20860954 Uniprot:E2QTB2
Length = 519
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 597 ESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQGMSKPIEAI-QRPK-KLG 654
+ G+V Q+G FE HTKG G K+M + G+ EG GLG G+ + +++ Q P+ K G
Sbjct: 387 QEDGSVIRCQVGTFERHTKGIGRKVMERQGWAEGQGLGSQCSGVPEALDSDGQHPRCKRG 446
Query: 655 LG 656
LG
Sbjct: 447 LG 448
>RGD|1311216 [details] [associations]
symbol:Gpatch3 "G patch domain containing 3" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 RGD:1311216 GO:GO:0003676 CTD:63906 OMA:DDRGEEW
GeneTree:ENSGT00390000004191 OrthoDB:EOG4KSPJS IPI:IPI00359063
RefSeq:XP_001065500.1 RefSeq:XP_342934.3 Ensembl:ENSRNOT00000009394
GeneID:362615 KEGG:rno:362615 UCSC:RGD:1311216 NextBio:680612
Uniprot:D4A385
Length = 522
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 580 DSVEIRTVDAVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQG 639
DSV++R + E E G+V Q+G FE HTKG G K+M + G+ EG GLG G
Sbjct: 376 DSVQMRLERR--LREGQED-GSVIGRQVGTFERHTKGIGRKVMERQGWAEGQGLGSRCSG 432
Query: 640 MSKPIEAI-QRPK-KLGLG 656
+ + ++ Q P+ K GLG
Sbjct: 433 VPEALDGDGQHPRCKRGLG 451
>SGD|S000005168 [details] [associations]
symbol:SQS1 "Protein that stimulates the ATPase and helicase
activities of Prp43p" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0030688 "preribosome, small subunit
precursor" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IGI] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030490 "maturation of SSU-rRNA" evidence=IGI]
[GO:0006364 "rRNA processing" evidence=IGI] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0032781 "positive regulation of ATPase
activity" evidence=IMP;IDA] [GO:0051096 "positive regulation of
helicase activity" evidence=IMP;IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
PROSITE:PS51061 SMART:SM00443 SGD:S000005168 GO:GO:0005634
GO:GO:0005737 EMBL:BK006947 GO:GO:0003676 GO:GO:0030687
GO:GO:0032781 GO:GO:0000398 EMBL:Z69381 EMBL:U20390 GO:GO:0030686
GO:GO:0030490 GO:GO:0030688 GO:GO:0051096 eggNOG:NOG114135
EMBL:Z71500 PIR:S63182 RefSeq:NP_014175.1 ProteinModelPortal:P53866
SMR:P53866 DIP:DIP-6728N IntAct:P53866 MINT:MINT-618682
STRING:P53866 PaxDb:P53866 EnsemblFungi:YNL224C GeneID:855497
KEGG:sce:YNL224C CYGD:YNL224c HOGENOM:HOG000154406 OMA:NIGRRML
OrthoDB:EOG4V46HJ NextBio:979487 Genevestigator:P53866
GermOnline:YNL224C Uniprot:P53866
Length = 767
Score = 79 (32.9 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 589 AVDINETCESKGTVSSTQI---GAFEVHTKGFGSKMMAKMGYVEGGGLGKDG-QGMSKPI 644
A + +T K V +I A E+ + G +M+ K+G+ G GLG G +G+S+PI
Sbjct: 692 AFERTKTIRGKFHVKEGEIVGQNAPEIGNENIGRRMLEKLGWKSGEGLGIQGNKGISEPI 751
Query: 645 EAIQRPKKLGL 655
A + + GL
Sbjct: 752 FAKIKKNRSGL 762
Score = 76 (31.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 27/106 (25%), Positives = 47/106 (44%)
Query: 397 EAQKSKKSRNLPG-AKKKHRKE-MIAVKRRER--MLRR---GVDLEDINSTLEQIVLEEV 449
E +SK S+ + AKK+ KE I + R ML++ G+ +++I E +
Sbjct: 553 ETLQSKFSKRIETKAKKRKAKEDFIDQENRNSNDMLKKYPYGLHIQNIKDEFESFLSRNN 612
Query: 450 DMFSFQPMHHRDCSQVRRLAAIYRLRSDSQGSGKKRFVTVTRTQHT 495
D +F P+ V ++A Y ++S G V V + + T
Sbjct: 613 DRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKT 658
Score = 59 (25.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 32/129 (24%), Positives = 54/129 (41%)
Query: 123 INLLGSKDSRIVAYVD-----QTPDLKPQNLIYSCDYDSSFVLGDSSHRGLGFCDDSEAT 177
++ LG + R+ AY++ P ++P YS + DSS G + DS
Sbjct: 434 VDELGLPEDRLPAYLNFIKNSLIPKIEPAEPTYS-----DIPISDSSDEGDSYEGDSYED 488
Query: 178 PSGIDSSSKHREQQDASDSDSLSFKEEVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIG 237
+ SS H + ++ D D +++ + DT+ E + L ET K K L
Sbjct: 489 DEDMASSVVHSDIEEGLD-DLIAYTLKHDTERFKTFE--TKSL--ETKGKGKKKKLLIDD 543
Query: 238 GMKLYTQDL 246
+ L T+ L
Sbjct: 544 ALALDTETL 552
>MGI|MGI:2442492 [details] [associations]
symbol:Gpatch3 "G patch domain containing 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 MGI:MGI:2442492 EMBL:AL627228 GO:GO:0003676 CTD:63906
eggNOG:NOG68693 HOGENOM:HOG000231150 HOVERGEN:HBG051825 OMA:DDRGEEW
EMBL:AK053051 IPI:IPI00222320 RefSeq:NP_766464.1 UniGene:Mm.40110
ProteinModelPortal:Q8BIY1 PRIDE:Q8BIY1 Ensembl:ENSMUST00000030662
GeneID:242691 KEGG:mmu:242691 UCSC:uc008vda.1
GeneTree:ENSGT00390000004191 InParanoid:A2A9E8 OrthoDB:EOG4KSPJS
NextBio:385496 Bgee:Q8BIY1 CleanEx:MM_GPATCH3 Genevestigator:Q8BIY1
GermOnline:ENSMUSG00000028850 Uniprot:Q8BIY1
Length = 525
Score = 123 (48.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 580 DSVEIRTVDAVDINETCESKGTVSSTQIGAFEVHTKGFGSKMMAKMGYVEGGGLGKDGQG 639
DSV++R + E E G+V Q+G FE HTKG G K+M + G+ EG GLG G
Sbjct: 380 DSVQMRLERR--LREGQED-GSVLGGQVGTFERHTKGIGRKVMERQGWAEGQGLGSRCSG 436
Query: 640 MSKPIEAI-QRPK-KLGLG 656
+ + ++ Q P+ K GLG
Sbjct: 437 VPEALDGDGQHPRCKRGLG 455
Score = 42 (19.8 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 20/85 (23%), Positives = 34/85 (40%)
Query: 182 DSSSKHREQQDASDSDSLSFKE----EVDTDGNNNQEEVAEELPDETLSKKKNSGFLSIG 237
+ + E++ S+ D +E E + QE E L +E + K G
Sbjct: 279 EGQQQEEEEESGSEEDDDRGEEWERHEALHEDVTGQERTTERLFEEEIELKWEKGG---S 335
Query: 238 GMKLYTQDL---SDEGS-DDQSASE 258
G+ YT +EG D+Q+A +
Sbjct: 336 GLVFYTDAQFWQEEEGDFDEQTADD 360
>UNIPROTKB|I3L6Q0 [details] [associations]
symbol:I3L6Q0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 GeneTree:ENSGT00530000063742 EMBL:CU855572
Ensembl:ENSSSCT00000025378 OMA:QEWITIG Uniprot:I3L6Q0
Length = 123
Score = 96 (38.9 bits), Expect = 0.00069, P = 0.00069
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 620 KMMAKMGYVEGGGLGKDGQGMSKPIEAIQRPKKLGLGVEFSNTDDD 665
K+MAKMG+ EG GLGK QG +EA + + GLG+ D +
Sbjct: 8 KLMAKMGFKEGEGLGKYSQGRKDIVEASNQKGRRGLGLTLQGFDQE 53
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.129 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 695 593 0.00084 120 3 11 23 0.48 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 614 (65 KB)
Total size of DFA: 293 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.83u 0.09s 58.92t Elapsed: 00:00:04
Total cpu time: 58.84u 0.09s 58.93t Elapsed: 00:00:04
Start: Thu May 9 18:30:06 2013 End: Thu May 9 18:30:10 2013