Query 043290
Match_columns 430
No_of_seqs 153 out of 1559
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 05:22:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.2E-69 4.2E-74 523.9 36.7 395 2-430 12-413 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.8E-62 1.3E-66 479.6 40.1 412 3-430 6-428 (480)
3 2c1x_A UDP-glucose flavonoid 3 100.0 3.5E-61 1.2E-65 469.7 36.9 398 2-429 6-410 (456)
4 2acv_A Triterpene UDP-glucosyl 100.0 6.9E-61 2.4E-65 468.9 38.3 405 2-430 8-424 (463)
5 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.4E-61 1.8E-65 473.0 35.8 405 1-430 6-438 (482)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.4E-42 8.2E-47 336.0 27.1 365 1-429 10-387 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.7E-41 6E-46 327.5 21.3 326 2-426 21-367 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.2E-40 4.1E-45 323.0 25.1 343 4-428 1-366 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 2.1E-39 7.2E-44 314.4 23.8 342 4-428 1-367 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.3E-38 4.6E-43 307.2 20.9 332 5-430 2-351 (404)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.8E-35 6.3E-40 285.4 27.0 346 1-429 2-364 (402)
12 3rsc_A CALG2; TDP, enediyne, s 100.0 9.2E-36 3.1E-40 288.8 24.5 345 3-430 20-380 (415)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.2E-34 4E-39 282.4 27.1 346 1-429 5-365 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1.2E-34 3.9E-39 283.2 20.7 341 2-429 19-401 (441)
15 2p6p_A Glycosyl transferase; X 100.0 1.6E-33 5.4E-38 270.3 22.5 324 4-429 1-345 (384)
16 4fzr_A SSFS6; structural genom 100.0 5.7E-32 2E-36 260.7 19.6 322 3-429 15-366 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.1E-30 3.9E-35 251.6 19.4 316 3-423 20-361 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.4E-30 1.8E-34 246.3 19.8 322 3-430 1-355 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.4E-27 4.7E-32 231.1 25.9 325 3-429 20-374 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.9 1.5E-25 5E-30 189.3 16.4 147 255-429 5-152 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 4.4E-23 1.5E-27 195.6 22.6 309 1-429 1-322 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.6E-16 5.4E-21 150.6 23.9 305 1-428 2-322 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 2.8E-15 9.5E-20 129.6 9.2 145 269-428 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.4 2.2E-10 7.5E-15 103.1 22.9 115 271-407 157-274 (282)
25 3okp_A GDP-mannose-dependent a 99.0 1.4E-07 4.9E-12 89.5 26.5 316 1-430 2-343 (394)
26 3c48_A Predicted glycosyltrans 98.9 2.9E-07 9.8E-12 88.9 25.3 78 337-429 305-389 (438)
27 1v4v_A UDP-N-acetylglucosamine 98.9 1.3E-07 4.5E-12 89.4 21.6 126 271-430 198-333 (376)
28 1vgv_A UDP-N-acetylglucosamine 98.9 2.1E-07 7.3E-12 88.1 21.8 127 270-429 204-340 (384)
29 2iuy_A Avigt4, glycosyltransfe 98.9 2.9E-08 9.8E-13 92.7 14.7 125 274-430 164-307 (342)
30 3fro_A GLGA glycogen synthase; 98.9 3.6E-07 1.2E-11 88.0 22.3 129 273-429 252-393 (439)
31 3ot5_A UDP-N-acetylglucosamine 98.9 6.6E-08 2.3E-12 92.3 16.8 75 338-429 282-359 (403)
32 3dzc_A UDP-N-acetylglucosamine 98.9 3.8E-07 1.3E-11 86.9 22.0 127 270-429 229-365 (396)
33 3beo_A UDP-N-acetylglucosamine 98.7 9.1E-07 3.1E-11 83.4 19.4 75 338-429 263-340 (375)
34 2r60_A Glycosyl transferase, g 98.6 4.5E-06 1.5E-10 82.0 22.0 79 337-430 334-423 (499)
35 2gek_A Phosphatidylinositol ma 98.6 8.5E-06 2.9E-10 77.5 22.4 78 337-429 262-347 (406)
36 2jjm_A Glycosyl transferase, g 98.5 5E-05 1.7E-09 72.0 25.5 77 338-429 267-348 (394)
37 4hwg_A UDP-N-acetylglucosamine 98.4 2.4E-05 8.4E-10 73.8 18.9 131 271-430 203-341 (385)
38 2x6q_A Trehalose-synthase TRET 98.4 0.00041 1.4E-08 66.1 27.5 76 337-429 292-377 (416)
39 2iw1_A Lipopolysaccharide core 98.3 0.00016 5.3E-09 67.8 23.7 128 271-429 195-335 (374)
40 2f9f_A First mannosyl transfer 98.1 1.8E-05 6.3E-10 66.0 10.6 125 273-429 24-160 (177)
41 3s28_A Sucrose synthase 1; gly 98.1 9.4E-05 3.2E-09 76.2 16.5 78 337-429 639-728 (816)
42 2hy7_A Glucuronosyltransferase 97.7 0.012 3.9E-07 55.9 23.6 72 337-429 264-350 (406)
43 4gyw_A UDP-N-acetylglucosamine 97.2 0.001 3.5E-08 68.0 9.9 101 270-383 521-629 (723)
44 2bfw_A GLGA glycogen synthase; 96.9 0.0088 3E-07 50.2 11.3 75 339-429 96-178 (200)
45 3q3e_A HMW1C-like glycosyltran 96.9 0.006 2.1E-07 60.1 11.0 101 271-384 440-549 (631)
46 3qhp_A Type 1 capsular polysac 96.7 0.0088 3E-07 48.6 9.6 76 337-429 55-138 (166)
47 3tov_A Glycosyl transferase fa 96.6 0.4 1.4E-05 44.1 21.1 96 270-382 184-286 (349)
48 2vsy_A XCC0866; transferase, g 96.5 0.019 6.7E-07 56.9 12.4 80 338-429 434-520 (568)
49 3oy2_A Glycosyltransferase B73 95.5 0.12 4E-06 48.8 12.1 43 340-384 256-305 (413)
50 1rzu_A Glycogen synthase 1; gl 95.1 0.35 1.2E-05 46.6 14.3 130 272-429 291-438 (485)
51 1psw_A ADP-heptose LPS heptosy 95.1 1.9 6.5E-05 39.3 23.2 96 270-382 179-286 (348)
52 2xci_A KDO-transferase, 3-deox 95.1 0.027 9.2E-07 52.7 6.0 78 339-429 261-344 (374)
53 2qzs_A Glycogen synthase; glyc 95.0 0.1 3.4E-06 50.5 10.1 131 272-429 292-439 (485)
54 3rhz_A GTF3, nucleotide sugar 94.0 0.1 3.5E-06 48.0 6.8 75 339-428 215-301 (339)
55 2x0d_A WSAF; GT4 family, trans 92.8 0.11 3.9E-06 49.1 5.3 76 338-429 295-377 (413)
56 3vue_A GBSS-I, granule-bound s 87.1 1.5 5.3E-05 42.8 8.0 99 272-384 327-433 (536)
57 2gt1_A Lipopolysaccharide hept 86.2 0.52 1.8E-05 42.8 3.9 39 4-42 1-39 (326)
58 3ty2_A 5'-nucleotidase SURE; s 82.8 7.9 0.00027 33.5 9.4 114 2-142 10-136 (261)
59 1ccw_A Protein (glutamate muta 75.0 3.8 0.00013 31.7 4.7 39 1-41 1-39 (137)
60 2x0d_A WSAF; GT4 family, trans 71.5 1.8 6.1E-05 40.8 2.4 38 3-42 46-88 (413)
61 2wqk_A 5'-nucleotidase SURE; S 71.5 9.3 0.00032 33.0 6.7 111 6-141 4-127 (251)
62 2ixd_A LMBE-related protein; h 70.8 22 0.00076 30.4 9.0 41 1-42 1-42 (242)
63 4dzz_A Plasmid partitioning pr 69.0 20 0.00067 29.3 8.2 35 6-42 4-39 (206)
64 2l82_A Designed protein OR32; 69.0 10 0.00036 27.3 5.3 35 272-310 2-36 (162)
65 3vue_A GBSS-I, granule-bound s 69.0 4.8 0.00017 39.3 4.9 38 3-42 9-52 (536)
66 1id1_A Putative potassium chan 68.1 5.7 0.00019 31.1 4.4 34 1-41 1-34 (153)
67 1rzu_A Glycogen synthase 1; gl 63.8 5 0.00017 38.3 3.9 36 5-42 2-43 (485)
68 3nb0_A Glycogen [starch] synth 62.9 11 0.00038 37.7 6.0 47 338-386 490-552 (725)
69 2qzs_A Glycogen synthase; glyc 62.2 5.5 0.00019 38.0 3.8 37 4-42 1-43 (485)
70 2yxb_A Coenzyme B12-dependent 62.1 57 0.0019 25.7 9.2 36 3-40 18-53 (161)
71 3zqu_A Probable aromatic acid 61.1 9.3 0.00032 32.0 4.5 38 2-42 3-40 (209)
72 2phj_A 5'-nucleotidase SURE; S 60.1 39 0.0013 29.0 8.3 37 4-44 2-38 (251)
73 3qjg_A Epidermin biosynthesis 56.6 10 0.00034 30.7 3.8 38 1-42 4-41 (175)
74 4e5s_A MCCFLIKE protein (BA_56 56.4 17 0.00058 32.9 5.7 75 283-385 61-137 (331)
75 1j9j_A Stationary phase surviV 53.9 40 0.0014 28.9 7.3 99 20-141 16-128 (247)
76 2iz6_A Molybdenum cofactor car 53.7 24 0.00081 28.6 5.6 44 341-385 92-140 (176)
77 1mvl_A PPC decarboxylase athal 53.3 12 0.00041 31.3 3.9 38 1-42 17-54 (209)
78 2i2c_A Probable inorganic poly 53.1 14 0.00046 32.4 4.4 26 359-384 38-69 (272)
79 3mcu_A Dipicolinate synthase, 52.7 11 0.00037 31.5 3.5 38 2-42 4-42 (207)
80 4h1h_A LMO1638 protein; MCCF-l 52.7 19 0.00066 32.4 5.5 74 283-384 61-136 (327)
81 4dik_A Flavoprotein; TM0755, e 51.9 22 0.00075 33.2 5.9 50 256-305 250-299 (410)
82 1g63_A Epidermin modifying enz 51.5 13 0.00045 30.2 3.8 38 1-42 1-38 (181)
83 2v4n_A Multifunctional protein 50.6 77 0.0026 27.3 8.6 110 5-141 3-126 (254)
84 1u0t_A Inorganic polyphosphate 50.2 25 0.00084 31.3 5.8 32 351-384 72-107 (307)
85 3lqk_A Dipicolinate synthase s 50.0 12 0.00042 31.0 3.4 39 2-42 6-44 (201)
86 3sju_A Keto reductase; short-c 49.9 94 0.0032 26.8 9.6 35 1-40 21-55 (279)
87 1p3y_1 MRSD protein; flavoprot 48.6 8.7 0.0003 31.7 2.3 38 2-42 7-44 (194)
88 3oid_A Enoyl-[acyl-carrier-pro 48.6 1.2E+02 0.0043 25.6 10.6 35 1-40 1-35 (258)
89 1eiw_A Hypothetical protein MT 48.4 37 0.0013 25.0 5.4 64 353-430 37-109 (111)
90 3lyh_A Cobalamin (vitamin B12) 46.5 26 0.0009 26.2 4.6 37 271-307 6-42 (126)
91 2ejb_A Probable aromatic acid 46.3 23 0.0008 29.0 4.5 35 5-42 3-37 (189)
92 2e6c_A 5'-nucleotidase SURE; S 45.4 93 0.0032 26.5 8.3 98 20-141 16-129 (244)
93 1zl0_A Hypothetical protein PA 45.2 30 0.001 30.9 5.4 76 282-385 62-139 (311)
94 3osu_A 3-oxoacyl-[acyl-carrier 43.2 1.4E+02 0.0049 24.9 9.5 36 1-41 1-36 (246)
95 1qzu_A Hypothetical protein MD 43.2 16 0.00054 30.5 3.1 39 1-42 17-56 (206)
96 2d1p_B TUSC, hypothetical UPF0 43.1 44 0.0015 24.8 5.3 39 1-42 1-41 (119)
97 3sr3_A Microcin immunity prote 42.8 31 0.0011 31.2 5.2 75 283-385 62-138 (336)
98 3ged_A Short-chain dehydrogena 42.7 1.5E+02 0.0053 25.1 9.5 33 1-40 1-33 (247)
99 3ksu_A 3-oxoacyl-acyl carrier 42.3 1E+02 0.0036 26.2 8.5 31 5-40 12-42 (262)
100 1l5x_A SurviVal protein E; str 41.9 63 0.0022 28.2 6.8 22 20-44 16-37 (280)
101 1g5t_A COB(I)alamin adenosyltr 41.8 1.4E+02 0.0049 24.4 12.0 103 3-123 28-131 (196)
102 4e3z_A Putative oxidoreductase 41.7 1.2E+02 0.0041 25.9 8.9 35 1-40 23-57 (272)
103 1sbz_A Probable aromatic acid 41.6 26 0.00089 28.9 4.1 35 5-42 2-37 (197)
104 1e2b_A Enzyme IIB-cellobiose; 41.4 68 0.0023 23.2 6.0 39 1-41 1-39 (106)
105 2q5c_A NTRC family transcripti 41.3 35 0.0012 28.0 5.0 28 358-386 53-80 (196)
106 4b4k_A N5-carboxyaminoimidazol 40.9 1E+02 0.0035 24.8 7.2 34 272-307 23-56 (181)
107 3dm5_A SRP54, signal recogniti 40.8 1.5E+02 0.0051 27.9 9.7 38 5-44 102-139 (443)
108 3vot_A L-amino acid ligase, BL 40.1 1.5E+02 0.0052 27.3 9.9 24 112-135 75-100 (425)
109 1y80_A Predicted cobalamin bin 38.7 30 0.001 28.6 4.2 37 3-41 88-124 (210)
110 3gpi_A NAD-dependent epimerase 38.6 37 0.0013 29.4 5.0 34 1-41 1-34 (286)
111 2i2x_B MTAC, methyltransferase 38.5 51 0.0017 28.4 5.8 38 3-42 123-160 (258)
112 4ds3_A Phosphoribosylglycinami 38.4 1.7E+02 0.0058 24.2 11.0 38 1-41 5-42 (209)
113 2pju_A Propionate catabolism o 38.3 50 0.0017 27.8 5.5 64 355-428 64-150 (225)
114 3fgn_A Dethiobiotin synthetase 38.2 1.9E+02 0.0064 24.7 10.1 27 13-41 37-63 (251)
115 4fu0_A D-alanine--D-alanine li 38.0 16 0.00056 33.2 2.6 37 1-39 1-41 (357)
116 3u7q_A Nitrogenase molybdenum- 37.0 1.4E+02 0.0047 28.5 9.0 24 112-138 417-440 (492)
117 1f9y_A HPPK, protein (6-hydrox 36.7 43 0.0015 26.4 4.5 32 273-304 2-34 (158)
118 2yvq_A Carbamoyl-phosphate syn 36.3 66 0.0023 24.8 5.5 45 260-309 11-58 (143)
119 3zzm_A Bifunctional purine bio 35.5 54 0.0019 31.2 5.6 34 2-42 8-41 (523)
120 2qx0_A 7,8-dihydro-6-hydroxyme 35.5 59 0.002 25.7 5.1 28 273-300 3-30 (159)
121 3trh_A Phosphoribosylaminoimid 35.4 1.1E+02 0.0038 24.3 6.6 16 288-303 21-36 (169)
122 3cio_A ETK, tyrosine-protein k 34.5 2.3E+02 0.0079 24.7 10.6 36 5-42 105-142 (299)
123 2lnd_A De novo designed protei 34.2 36 0.0012 23.0 3.0 47 375-429 50-99 (112)
124 3tla_A MCCF; serine protease, 33.2 42 0.0014 30.8 4.5 76 282-385 91-168 (371)
125 3da8_A Probable 5'-phosphoribo 33.2 2.1E+02 0.0072 23.7 8.6 102 289-427 78-181 (215)
126 3qbc_A 2-amino-4-hydroxy-6-hyd 32.8 53 0.0018 26.0 4.4 33 272-304 5-38 (161)
127 3u7q_B Nitrogenase molybdenum- 32.8 1.5E+02 0.005 28.6 8.5 32 4-42 365-396 (523)
128 1tjn_A Sirohydrochlorin cobalt 32.6 84 0.0029 24.5 5.7 37 271-307 25-63 (156)
129 2r8r_A Sensor protein; KDPD, P 32.1 61 0.0021 27.4 5.0 38 3-42 6-43 (228)
130 3pdi_A Nitrogenase MOFE cofact 31.8 1.3E+02 0.0046 28.5 8.0 24 112-138 401-424 (483)
131 4iin_A 3-ketoacyl-acyl carrier 31.8 2.4E+02 0.0081 23.9 9.6 32 5-41 30-61 (271)
132 1cbk_A Protein (7,8-dihydro-6- 31.7 58 0.002 25.8 4.5 28 273-300 3-30 (160)
133 3rg8_A Phosphoribosylaminoimid 31.5 64 0.0022 25.4 4.6 17 376-396 108-124 (159)
134 2q5c_A NTRC family transcripti 31.4 77 0.0026 25.9 5.5 44 96-145 129-172 (196)
135 3q94_A Fructose-bisphosphate a 31.3 1.2E+02 0.004 26.6 6.8 40 256-296 159-205 (288)
136 2lpm_A Two-component response 31.1 29 0.00098 26.0 2.5 40 97-139 41-85 (123)
137 2an1_A Putative kinase; struct 30.9 34 0.0012 30.0 3.5 32 351-384 60-95 (292)
138 3o1l_A Formyltetrahydrofolate 30.7 1.8E+02 0.006 25.7 8.0 105 286-427 167-273 (302)
139 3ors_A N5-carboxyaminoimidazol 30.7 1.3E+02 0.0043 23.8 6.2 31 273-305 5-35 (163)
140 3mc3_A DSRE/DSRF-like family p 30.7 53 0.0018 24.9 4.1 36 5-42 17-55 (134)
141 3nrb_A Formyltetrahydrofolate 30.6 2.1E+02 0.0072 25.0 8.5 101 290-427 155-257 (287)
142 3kuu_A Phosphoribosylaminoimid 30.5 1.2E+02 0.0042 24.2 6.1 31 273-305 14-44 (174)
143 1yt5_A Inorganic polyphosphate 30.3 27 0.00093 30.1 2.6 28 354-383 41-71 (258)
144 3ip0_A 2-amino-4-hydroxy-6-hyd 30.3 63 0.0021 25.5 4.5 27 273-299 2-28 (158)
145 3edm_A Short chain dehydrogena 30.1 2.5E+02 0.0085 23.6 9.1 31 5-40 9-39 (259)
146 3bgw_A DNAB-like replicative h 30.0 1.8E+02 0.006 27.3 8.4 39 6-46 200-238 (444)
147 3kkl_A Probable chaperone prot 30.0 80 0.0027 26.9 5.5 40 1-42 1-51 (244)
148 3gk3_A Acetoacetyl-COA reducta 29.9 2.5E+02 0.0087 23.7 9.8 33 3-40 24-56 (269)
149 3obi_A Formyltetrahydrofolate 29.9 2.1E+02 0.0073 24.9 8.4 102 289-427 155-258 (288)
150 1jx7_A Hypothetical protein YC 29.7 42 0.0014 24.4 3.3 40 1-42 1-43 (117)
151 2hy5_B Intracellular sulfur ox 29.2 61 0.0021 24.7 4.2 39 1-42 5-45 (136)
152 3lou_A Formyltetrahydrofolate 28.9 2.6E+02 0.0088 24.5 8.7 102 289-427 160-263 (292)
153 1hdo_A Biliverdin IX beta redu 28.6 61 0.0021 26.0 4.5 35 1-41 1-35 (206)
154 2bw0_A 10-FTHFDH, 10-formyltet 28.6 69 0.0024 28.8 5.0 33 1-40 20-52 (329)
155 3oow_A Phosphoribosylaminoimid 28.5 2.2E+02 0.0075 22.5 8.0 35 272-308 6-40 (166)
156 1xmp_A PURE, phosphoribosylami 28.1 2.1E+02 0.007 22.8 7.0 34 272-307 12-45 (170)
157 2xj4_A MIPZ; replication, cell 28.0 68 0.0023 27.9 4.9 40 1-42 1-42 (286)
158 3dii_A Short-chain dehydrogena 27.9 2.6E+02 0.009 23.2 9.2 33 1-40 1-33 (247)
159 3p9x_A Phosphoribosylglycinami 27.8 78 0.0027 26.3 4.9 45 97-141 15-60 (211)
160 4ds3_A Phosphoribosylglycinami 27.8 1.8E+02 0.006 24.1 7.1 101 290-427 76-178 (209)
161 4grd_A N5-CAIR mutase, phospho 27.8 1.3E+02 0.0044 24.0 5.8 35 271-307 12-46 (173)
162 2r85_A PURP protein PF1517; AT 27.7 57 0.0019 28.9 4.4 33 2-42 1-33 (334)
163 1w85_B Pyruvate dehydrogenase 27.4 3.2E+02 0.011 24.1 10.1 16 415-430 308-323 (324)
164 3ezx_A MMCP 1, monomethylamine 27.4 64 0.0022 26.9 4.4 38 3-42 92-129 (215)
165 3u5t_A 3-oxoacyl-[acyl-carrier 27.3 2.8E+02 0.0097 23.4 9.9 32 4-40 27-58 (267)
166 3tqr_A Phosphoribosylglycinami 27.3 71 0.0024 26.7 4.5 43 97-139 18-60 (215)
167 3tfo_A Putative 3-oxoacyl-(acy 27.2 2.9E+02 0.0098 23.4 8.9 35 1-40 1-35 (264)
168 3n0v_A Formyltetrahydrofolate 27.2 2.8E+02 0.0097 24.1 8.7 102 289-427 155-258 (286)
169 3u9l_A 3-oxoacyl-[acyl-carrier 27.1 2.1E+02 0.0073 25.2 8.2 31 5-40 6-36 (324)
170 3imf_A Short chain dehydrogena 27.1 2.8E+02 0.0095 23.2 8.9 31 5-40 7-37 (257)
171 1lss_A TRK system potassium up 26.9 65 0.0022 23.9 4.1 33 2-41 3-35 (140)
172 2qs7_A Uncharacterized protein 26.8 53 0.0018 25.3 3.5 36 5-42 10-45 (144)
173 1bg6_A N-(1-D-carboxylethyl)-L 26.7 31 0.001 31.2 2.4 34 1-41 2-35 (359)
174 3av3_A Phosphoribosylglycinami 26.6 2.5E+02 0.0086 23.1 7.9 101 290-427 72-174 (212)
175 1ehi_A LMDDL2, D-alanine:D-lac 26.6 53 0.0018 30.1 4.0 38 1-40 1-43 (377)
176 3h7a_A Short chain dehydrogena 26.5 1.3E+02 0.0045 25.4 6.4 31 5-40 8-38 (252)
177 3sho_A Transcriptional regulat 26.4 2.2E+02 0.0077 22.4 7.6 92 258-387 29-125 (187)
178 2wm1_A 2-amino-3-carboxymucona 26.3 67 0.0023 28.6 4.7 50 257-309 125-177 (336)
179 1v5e_A Pyruvate oxidase; oxido 26.3 1.2E+02 0.0041 29.7 6.8 27 357-383 69-101 (590)
180 2vo1_A CTP synthase 1; pyrimid 26.3 76 0.0026 27.5 4.5 40 1-42 20-62 (295)
181 3ghy_A Ketopantoate reductase 26.2 32 0.0011 30.9 2.5 34 1-41 1-34 (335)
182 1kjn_A MTH0777; hypotethical p 26.0 43 0.0015 26.1 2.6 28 13-42 18-45 (157)
183 3ijr_A Oxidoreductase, short c 25.9 2.7E+02 0.0094 23.9 8.6 31 5-40 48-78 (291)
184 4fe7_A Xylose operon regulator 25.7 1.9E+02 0.0065 26.4 7.9 28 15-43 122-149 (412)
185 1xp8_A RECA protein, recombina 25.5 3.8E+02 0.013 24.3 9.8 39 6-46 77-115 (366)
186 3kcq_A Phosphoribosylglycinami 25.5 2.1E+02 0.007 23.8 7.1 101 290-427 72-174 (215)
187 4fn4_A Short chain dehydrogena 25.3 3.1E+02 0.011 23.2 9.3 86 4-120 7-92 (254)
188 1mio_A Nitrogenase molybdenum 25.0 2.1E+02 0.0072 27.6 8.1 24 112-138 456-479 (533)
189 1z0s_A Probable inorganic poly 25.0 1.3E+02 0.0045 26.2 6.0 29 354-384 68-99 (278)
190 3lp6_A Phosphoribosylaminoimid 24.9 2.5E+02 0.0087 22.4 7.0 34 272-307 8-41 (174)
191 2xvy_A Chelatase, putative; me 24.9 84 0.0029 27.0 4.9 39 271-309 10-50 (269)
192 3ia7_A CALG4; glycosysltransfe 24.8 1.5E+02 0.005 26.8 6.8 27 354-382 102-130 (402)
193 3obb_A Probable 3-hydroxyisobu 24.6 51 0.0018 29.1 3.4 31 1-40 3-33 (300)
194 1qgu_B Protein (nitrogenase mo 24.5 2.8E+02 0.0095 26.6 8.8 25 112-139 434-465 (519)
195 3q0i_A Methionyl-tRNA formyltr 24.1 89 0.003 27.9 4.9 34 1-41 5-38 (318)
196 1ybh_A Acetolactate synthase, 24.1 90 0.0031 30.6 5.4 26 358-383 77-108 (590)
197 1u11_A PURE (N5-carboxyaminoim 24.1 1.9E+02 0.0065 23.3 6.2 36 272-309 22-57 (182)
198 2uz1_A Benzaldehyde lyase; thi 24.1 87 0.003 30.4 5.3 26 358-383 68-99 (563)
199 3igf_A ALL4481 protein; two-do 24.1 1.5E+02 0.0052 27.0 6.6 35 5-41 3-38 (374)
200 4iiu_A 3-oxoacyl-[acyl-carrier 23.6 3E+02 0.01 23.1 8.3 58 5-69 27-84 (267)
201 3grc_A Sensor protein, kinase; 23.6 2.1E+02 0.0073 20.7 7.0 47 375-429 79-125 (140)
202 3is3_A 17BETA-hydroxysteroid d 23.5 2.6E+02 0.009 23.6 7.9 31 5-40 19-49 (270)
203 2hbv_A 2-amino-3-carboxymucona 23.5 2.4E+02 0.0082 24.8 7.9 49 257-309 129-180 (334)
204 1o4v_A Phosphoribosylaminoimid 23.5 2.1E+02 0.0073 23.0 6.4 31 364-396 105-137 (183)
205 3sz8_A 2-dehydro-3-deoxyphosph 23.5 3.7E+02 0.013 23.4 9.9 14 415-428 256-269 (285)
206 3v2g_A 3-oxoacyl-[acyl-carrier 23.4 2.8E+02 0.0097 23.5 8.1 31 5-40 32-62 (271)
207 3oy2_A Glycosyltransferase B73 23.4 56 0.0019 29.9 3.6 35 5-42 2-39 (413)
208 3r1i_A Short-chain type dehydr 23.3 2.2E+02 0.0074 24.4 7.3 32 5-41 33-64 (276)
209 3ucx_A Short chain dehydrogena 23.0 3.4E+02 0.012 22.8 9.7 31 5-40 12-42 (264)
210 3auf_A Glycinamide ribonucleot 23.0 3.3E+02 0.011 22.7 8.5 101 290-427 91-193 (229)
211 4fs3_A Enoyl-[acyl-carrier-pro 22.9 1.8E+02 0.0063 24.5 6.6 32 4-40 6-39 (256)
212 1jkx_A GART;, phosphoribosylgl 22.8 3.1E+02 0.011 22.5 7.8 101 290-427 69-171 (212)
213 3i4f_A 3-oxoacyl-[acyl-carrier 22.6 2.3E+02 0.0078 23.8 7.3 31 5-40 8-38 (264)
214 2gkg_A Response regulator homo 22.6 1.1E+02 0.0038 21.7 4.6 46 375-430 79-124 (127)
215 3lyl_A 3-oxoacyl-(acyl-carrier 22.5 2.5E+02 0.0086 23.2 7.5 31 5-40 6-36 (247)
216 2cg8_A Dihydroneopterin aldola 22.3 67 0.0023 27.9 3.6 33 272-304 120-152 (270)
217 1mio_B Nitrogenase molybdenum 22.3 3.4E+02 0.012 25.4 8.9 25 112-139 385-409 (458)
218 3p9x_A Phosphoribosylglycinami 22.2 3.3E+02 0.011 22.4 8.5 102 289-427 70-173 (211)
219 1e4e_A Vancomycin/teicoplanin 22.2 54 0.0018 29.5 3.1 38 1-41 1-43 (343)
220 1uan_A Hypothetical protein TT 22.2 3.4E+02 0.012 22.5 8.7 36 6-42 5-40 (227)
221 3kjh_A CO dehydrogenase/acetyl 22.2 56 0.0019 27.4 3.2 36 5-42 2-37 (254)
222 3av3_A Phosphoribosylglycinami 22.1 1.1E+02 0.0037 25.4 4.7 44 98-141 17-61 (212)
223 1zym_A Enzyme I; phosphotransf 22.1 81 0.0028 27.1 4.1 46 339-384 156-207 (258)
224 1cp2_A CP2, nitrogenase iron p 22.0 79 0.0027 26.9 4.1 35 6-42 4-38 (269)
225 3afo_A NADH kinase POS5; alpha 21.9 72 0.0025 29.4 3.9 36 347-384 107-147 (388)
226 1meo_A Phosophoribosylglycinam 21.9 1.2E+02 0.0042 25.0 5.0 45 97-141 13-58 (209)
227 2i87_A D-alanine-D-alanine lig 21.8 44 0.0015 30.4 2.5 38 1-40 1-42 (364)
228 4da9_A Short-chain dehydrogena 21.7 2.4E+02 0.0081 24.2 7.2 31 5-40 30-60 (280)
229 4dmm_A 3-oxoacyl-[acyl-carrier 21.6 3.4E+02 0.012 22.9 8.2 31 5-40 29-59 (269)
230 3s55_A Putative short-chain de 21.5 3.7E+02 0.013 22.7 9.5 31 5-40 11-41 (281)
231 4imr_A 3-oxoacyl-(acyl-carrier 21.3 3E+02 0.01 23.5 7.7 32 5-41 34-65 (275)
232 3kcq_A Phosphoribosylglycinami 21.2 91 0.0031 26.0 4.1 45 97-141 21-66 (215)
233 3g23_A Peptidase U61, LD-carbo 21.0 48 0.0016 28.9 2.4 29 282-310 50-78 (274)
234 4gmf_A Yersiniabactin biosynth 21.0 1.8E+02 0.006 26.6 6.4 64 345-408 57-127 (372)
235 3tl4_X Glutaminyl-tRNA synthet 20.9 54 0.0019 26.7 2.5 30 388-429 101-130 (187)
236 2x7j_A 2-succinyl-5-enolpyruvy 20.7 1.2E+02 0.0041 29.8 5.5 27 357-383 95-127 (604)
237 1q6z_A BFD, BFDC, benzoylforma 20.6 68 0.0023 30.9 3.7 25 358-382 65-95 (528)
238 3pdi_B Nitrogenase MOFE cofact 20.4 93 0.0032 29.4 4.5 25 112-139 375-399 (458)
239 1rw7_A YDR533CP; alpha-beta sa 20.3 1.7E+02 0.0058 24.6 5.8 40 1-42 1-51 (243)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.2e-69 Score=523.89 Aligned_cols=395 Identities=24% Similarity=0.374 Sum_probs=321.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhcc----CCCCCeEEEeCCCCCCCCCC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLT----DSQPRICIIDLPPVDPPLPD 77 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~ 77 (430)
+++||+++|+|++||++||++||+.|++||++++|||++++. ...++. ...++|+|+.++++.+++.+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~--------~~~~~~~~~~~~~~~i~~~~ipdglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTT--------TNDTLFSRSNEFLPNIKYYNVHDGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHH--------HHHHSCSSSSCCCTTEEEEECCCCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHH--------HHHhhhcccccCCCCceEEecCCCCCCCcc
Confidence 367999999999999999999999999999555599999862 222221 11357999999988777655
Q ss_pred CCCCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHHhhccccc
Q 043290 78 VLKKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQ 157 (430)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (430)
... +....+..+...+...+++.++++.++...++||||+|.+++|+..+|+++|||++.|++++++.+..+++++.+.
T Consensus 84 ~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 84 SSG-NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CCS-CTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccC-ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 433 3445566666677777888888876543458999999999999999999999999999999999998888876543
Q ss_pred ccc-cccccCCCcccccCCCCCCccCCCCCccccc-CCC-chHHHHHHHHhhccCcEEEEcccccccHHHHHHhhcCCCC
Q 043290 158 DRI-STVFESSDHELLIPGITSPVPVCVLPSCLFN-KDG-GHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNP 234 (430)
Q Consensus 158 ~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~ 234 (430)
... ...........++||++ +++..+++..+.. ... +.+.+.+..+.+.+.+++++||+++||++++.++.+ ..|
T Consensus 163 ~~~~~~~~~~~~~~~~iPg~p-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~-~~~ 240 (454)
T 3hbf_A 163 EKTGSKEVHDVKSIDVLPGFP-ELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS-KFK 240 (454)
T ss_dssp HTCCHHHHTTSSCBCCSTTSC-CBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT-TSS
T ss_pred hhcCCCccccccccccCCCCC-CcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh-cCC
Confidence 321 10111112223589996 7888888887753 221 356677778888899999999999999999988875 457
Q ss_pred CeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCC
Q 043290 235 PLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKD 314 (430)
Q Consensus 235 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~ 314 (430)
++++|||++....... ...+++|.+||+.++++++|||||||+...+.+++.+++++|++++++|||+++...
T Consensus 241 ~v~~vGPl~~~~~~~~----~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~--- 313 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQRK----VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP--- 313 (454)
T ss_dssp CEEECCCHHHHSCCSC----CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH---
T ss_pred CEEEECCccccccccc----ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc---
Confidence 8999999975433210 233568999999988899999999999998999999999999999999999998651
Q ss_pred ccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHH
Q 043290 315 EASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFR 394 (430)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~r 394 (430)
...+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++
T Consensus 314 ----------~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~ 383 (454)
T 3hbf_A 314 ----------KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTIL 383 (454)
T ss_dssp ----------HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred ----------hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHH
Confidence 1347889988999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhceeEEeecccccCCcccCHhHHHHHHHHhhC
Q 043290 395 MVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 395 v~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
+++.||+|+.++.+ .+++++|+++|+++|+
T Consensus 384 v~~~~g~Gv~l~~~------~~~~~~l~~av~~ll~ 413 (454)
T 3hbf_A 384 TESVLEIGVGVDNG------VLTKESIKKALELTMS 413 (454)
T ss_dssp HHTTSCSEEECGGG------SCCHHHHHHHHHHHHS
T ss_pred HHHhhCeeEEecCC------CCCHHHHHHHHHHHHC
Confidence 99877999998754 7999999999999984
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.8e-62 Score=479.56 Aligned_cols=412 Identities=33% Similarity=0.611 Sum_probs=300.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCCeEEEEEecCCCC-ChhhHHhhhhccCC-CCCeEEEeCCCCCCCCCCCC
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDR-DDRISVTLLSMKLAV-APWVDAYAKSLTDS-QPRICIIDLPPVDPPLPDVL 79 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~r-GH~v~Vt~~~~~~~~-~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~ 79 (430)
++||+++|+|++||++|+++||++|++| ||+ |||++++.+. .. .++++... ..+++|+.+++...++...
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~--Vt~~t~~~~~~~~----~~~~~~~~~~~~i~~~~l~~~~~~~~~~- 78 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLT--VTFVIAGEGPPSK----AQRTVLDSLPSSISSVFLPPVDLTDLSS- 78 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCE--EEEEECCSSSCC-----CHHHHHC-CCTTEEEEECCCCCCTTSCT-
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCE--EEEEECCCcchhh----hhhhhccccCCCceEEEcCCCCCCCCCC-
Confidence 4799999999999999999999999998 999 9999987542 22 12221111 3579999998753221111
Q ss_pred CCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCc-eEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHHhhcccccc
Q 043290 80 KKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQV-TGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQD 158 (430)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 158 (430)
..+....+......+.+.++++++++.+ ..++ ||||+|.++.|+..+|+++|||++.+++++++.+..+++++....
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 156 (480)
T 2vch_A 79 STRIESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDE 156 (480)
T ss_dssp TCCHHHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHh
Confidence 1233333334445566677777766532 2478 999999999999999999999999999999887777766553322
Q ss_pred cccccccCCCcccccCCCCCCccCCCCCcccccCC-CchHHHHHHHHhhccCcEEEEcccccccHHHHHHhhcC--CCCC
Q 043290 159 RISTVFESSDHELLIPGITSPVPVCVLPSCLFNKD-GGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGD--LNPP 235 (430)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~--~~~~ 235 (430)
....++........+|+++ +++..+++..+.... ..++.+.+..+.+++..++++||+.+||+.++..+.+. .+++
T Consensus 157 ~~~~~~~~~~~~~~~Pg~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~ 235 (480)
T 2vch_A 157 TVSCEFRELTEPLMLPGCV-PVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPP 235 (480)
T ss_dssp HCCSCGGGCSSCBCCTTCC-CBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCC
T ss_pred cCCCcccccCCcccCCCCC-CCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCc
Confidence 2111111112223467765 555556665543321 13455566667778889999999999999998888752 2578
Q ss_pred eEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCC-
Q 043290 236 LYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKD- 314 (430)
Q Consensus 236 ~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~- 314 (430)
+++|||++....... ....+++|.+|||+++++++|||||||+...+.+++.+++++|++++++|||+++.....+
T Consensus 236 v~~vGpl~~~~~~~~---~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~ 312 (480)
T 2vch_A 236 VYPVGPLVNIGKQEA---KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN 312 (480)
T ss_dssp EEECCCCCCCSCSCC--------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT
T ss_pred EEEEecccccccccc---CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccc
Confidence 999999975432100 0234678999999987789999999999988999999999999999999999998752110
Q ss_pred -c-cccccccCCCCCCChhHHHhhcCceEEEe-ccchhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchh
Q 043290 315 -E-ASAHRYVTNNGVFPEGFLERIKGRGMICG-WVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLN 391 (430)
Q Consensus 315 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~ 391 (430)
+ .+..+.+.....+|++|.++.+++++++. |+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~n 392 (480)
T 2vch_A 313 SSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMN 392 (480)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHH
Confidence 0 00000001113588999989888888886 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhhC
Q 043290 392 AFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 392 a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
|+++++.+|+|+.++.+ +++.+++++|+++|+++|+
T Consensus 393 a~~l~~~~G~g~~l~~~---~~~~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 393 AVLLSEDIRAALRPRAG---DDGLVRREEVARVVKGLME 428 (480)
T ss_dssp HHHHHHTTCCEECCCCC---TTSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHhCeEEEeecc---cCCccCHHHHHHHHHHHhc
Confidence 99985446999988643 1236999999999999984
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.5e-61 Score=469.69 Aligned_cols=398 Identities=23% Similarity=0.365 Sum_probs=295.6
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhc-cCCCCCeEEEeCCCCCCCCCCCCC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSL-TDSQPRICIIDLPPVDPPLPDVLK 80 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 80 (430)
+++||+++|+|++||++|+++||++|++|||+++||+++++.... ...... .....+++|+.++++.+++.+. .
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~----~~~~~~~~~~~~~i~~~~i~~glp~~~~~-~ 80 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNA----SIFHDSMHTMQCNIKSYDISDGVPEGYVF-A 80 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHH----HHC-------CTTEEEEECCCCCCTTCCC-C
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHH----HhhccccccCCCceEEEeCCCCCCCcccc-c
Confidence 467999999999999999999999999999999899998762111 111100 0112579999998866554321 1
Q ss_pred CCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHHhhccccccc-
Q 043290 81 KSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQDR- 159 (430)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 159 (430)
......+..+...+...+++.++++.++...++||||+|.++.|+..+|+++|||++.+++++++.+..+.+.+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (456)
T 2c1x_A 81 GRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKI 160 (456)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHH
T ss_pred CChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhcc
Confidence 2333444444455556677777766532235899999999999999999999999999999988766555443322111
Q ss_pred ccccc-cC-CCcccccCCCCCCccCCCCCcccccCC--C-chHHHHHHHHhhccCcEEEEcccccccHHHHHHhhcCCCC
Q 043290 160 ISTVF-ES-SDHELLIPGITSPVPVCVLPSCLFNKD--G-GHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNP 234 (430)
Q Consensus 160 ~~~~~-~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~ 234 (430)
+.... .. .....++|+++ +++..+++..+.... . ..+.+.+....+++.+++++||+++||+.+...+++ .+|
T Consensus 161 ~~~~~~~~~~~~~~~~pg~~-~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~-~~~ 238 (456)
T 2c1x_A 161 GVSGIQGREDELLNFIPGMS-KVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS-KLK 238 (456)
T ss_dssp CSSCCTTCTTCBCTTSTTCT-TCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHH-HSS
T ss_pred CCcccccccccccccCCCCC-cccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHh-cCC
Confidence 10000 00 11223567876 456666665443211 1 123344444566778999999999999998777765 347
Q ss_pred CeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCC
Q 043290 235 PLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKD 314 (430)
Q Consensus 235 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~ 314 (430)
++++|||+....... . ...+.+|.+||+.++++++|||||||+...+.+++.+++++|++++++|||+++...
T Consensus 239 ~~~~vGpl~~~~~~~-~---~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~--- 311 (456)
T 2c1x_A 239 TYLNIGPFNLITPPP-V---VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA--- 311 (456)
T ss_dssp CEEECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG---
T ss_pred CEEEecCcccCcccc-c---ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc---
Confidence 899999997543211 0 122456999999987889999999999988889999999999999999999998651
Q ss_pred ccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHH
Q 043290 315 EASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFR 394 (430)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~r 394 (430)
...+|++|.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||++
T Consensus 312 ----------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~ 381 (456)
T 2c1x_A 312 ----------RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRM 381 (456)
T ss_dssp ----------GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred ----------hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHH
Confidence 1347788888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 395 MVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 395 v~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
+++.||+|+.++.+ .+++++|+++|+++|
T Consensus 382 l~~~~g~g~~l~~~------~~~~~~l~~~i~~ll 410 (456)
T 2c1x_A 382 VEDVLEIGVRIEGG------VFTKSGLMSCFDQIL 410 (456)
T ss_dssp HHHTSCCEEECGGG------SCCHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCC------CcCHHHHHHHHHHHH
Confidence 99988999998754 799999999999987
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=6.9e-61 Score=468.87 Aligned_cols=405 Identities=58% Similarity=1.028 Sum_probs=302.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDR--DDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVL 79 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~r--GH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (430)
+++||+++|+|++||++|+++||++|++| ||+ |||++++.++...+...++++.....+++|+.+++...++.+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~--Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLY--ITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEE--EEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcE--EEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCccccc
Confidence 46799999999999999999999999999 988 99999886543222233333222346799999997642221111
Q ss_pred CCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHHhhccccccc
Q 043290 80 KKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQDR 159 (430)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (430)
......+......+.+.++++++++ ...++||||+|.++.|+..+|+++|||++++++++++.+..+++++.+...
T Consensus 86 -~~~~~~~~~~~~~~~~~~~~ll~~~---~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 86 -KSPEFYILTFLESLIPHVKATIKTI---LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp -GSHHHHHHHHHHHTHHHHHHHHHHH---CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred -CCccHHHHHHHHhhhHHHHHHHHhc---cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 1122223334455666677777665 235899999999999999999999999999999999887777766544311
Q ss_pred ccccccCCCc---ccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhhccCcEEEEcccccccHHHHHHhhcCC--CC
Q 043290 160 ISTVFESSDH---ELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDL--NP 234 (430)
Q Consensus 160 ~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~--~~ 234 (430)
.++..... ...+|++..+++..+++..+......+..+.+..+.+++.+++++||+++||+.++.++.+.. .+
T Consensus 162 --~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~ 239 (463)
T 2acv_A 162 --EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP 239 (463)
T ss_dssp --CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred --CCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCC
Confidence 11211122 345677732555555554443221145556666677788899999999999999988887644 56
Q ss_pred CeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCCC
Q 043290 235 PLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSG-SFDVAQVKEIAIGLERSGYNFLWSLRVSCPK 313 (430)
Q Consensus 235 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~ 313 (430)
++++|||+............+..+++|.+||+.++++++|||||||+. ..+.+++.+++++|++++++|||+++.+
T Consensus 240 ~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~--- 316 (463)
T 2acv_A 240 PIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE--- 316 (463)
T ss_dssp CEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC---
T ss_pred cEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC---
Confidence 799999997543201000001456789999999888899999999998 8888999999999999999999999763
Q ss_pred CccccccccCCCCCCChhHHHhh--cCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchh
Q 043290 314 DEASAHRYVTNNGVFPEGFLERI--KGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLN 391 (430)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~ 391 (430)
...+|++|.++. ++|+++++|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.|
T Consensus 317 -----------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~N 385 (463)
T 2acv_A 317 -----------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLN 385 (463)
T ss_dssp -----------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHH
T ss_pred -----------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHH
Confidence 023677887777 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhceeEEeecccccCCc--ccCHhHHHHHHHHhhC
Q 043290 392 AFRMVKEQGLALDLRLDYRVGSD--LVMACDIESAVRCLMD 430 (430)
Q Consensus 392 a~rv~~~~G~G~~~~~~~~~~~~--~~~~~~l~~ai~~vl~ 430 (430)
|+++++.+|+|+.+..++ +.+ .+++++|+++|+++|+
T Consensus 386 a~~lv~~~g~g~~l~~~~--~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 386 AFRLVKEWGVGLGLRVDY--RKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp HHHHHHTSCCEEESCSSC--CTTCCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHcCeEEEEeccc--CCCCccccHHHHHHHHHHHHh
Confidence 999643359999883100 112 5899999999999984
No 5
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.4e-61 Score=472.96 Aligned_cols=405 Identities=24% Similarity=0.425 Sum_probs=290.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccC----C-CCCeEEEeCCCCCCCC
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTD----S-QPRICIIDLPPVDPPL 75 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~----~-~~~i~~~~~~~~~~~~ 75 (430)
|+++||+++|+|++||++|++.||++|++|||+ |||++++.+. ..+..... . .++++|+.+++..++.
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~--VT~v~t~~~~-----~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~ 78 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFH--ITFVNTEYNH-----KRLLKSRGPKAFDGFTDFNFESIPDGLTPM 78 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEEEHHHH-----HHHC------------CEEEEEECCCCC--
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCe--EEEEeCCchh-----hhhccccccccccCCCceEEEECCCCCCCc
Confidence 457899999999999999999999999999999 9999987321 11111000 0 1479999998765441
Q ss_pred C--CCCCCCHHHHHHHHHHhhhhhHHHHHHHhhccC-CCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHHhh
Q 043290 76 P--DVLKKSPEYFLSLVVESHLPNVKNIVSSRANSG-SLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLY 152 (430)
Q Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 152 (430)
. .....+...++..+...+.+.++++++++.++. ..++||||+|.++.|+..+|+++|||++.+++++++....+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 158 (482)
T 2pq6_A 79 EGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMH 158 (482)
T ss_dssp -------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTT
T ss_pred ccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHH
Confidence 1 011123344444443556667777776654210 2489999999999999999999999999999999876666544
Q ss_pred cccccccccccccCC--------Ccc-cccCCCCCCccCCCCCcccccCC--C-chHHHHHHHHhhccCcEEEEcccccc
Q 043290 153 LPTRQDRISTVFESS--------DHE-LLIPGITSPVPVCVLPSCLFNKD--G-GHATLVKLAQRFKDVDGIIVNTFHEL 220 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~--------~~~-~~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~s~~~l 220 (430)
++.....++.+.... +.. ..+|+++ .++..+++..+.... . ..+.+.+..+..++.+++++||+++|
T Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~l 237 (482)
T 2pq6_A 159 FRSFVERGIIPFKDESYLTNGCLETKVDWIPGLK-NFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNEL 237 (482)
T ss_dssp HHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCC-SCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGG
T ss_pred HHHHHhcCCCCCccccccccccccCccccCCCCC-CCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHH
Confidence 332211111111100 011 1345654 444555555443221 1 23334445556677889999999999
Q ss_pred cHHHHHHhhcCCCCCeEEeCccccC-CCCC------CC-CCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHH
Q 043290 221 EPYAVNAFSGDLNPPLYTVGPVLHL-KSQP------NP-DLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEI 292 (430)
Q Consensus 221 e~~~~~~~~~~~~~~~~~VGpl~~~-~~~~------~~-~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~ 292 (430)
|++++..+.+.. +++++|||++.. +... .. ...++.+.+|.+|||+++++++|||||||+...+.+++.++
T Consensus 238 e~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~ 316 (482)
T 2pq6_A 238 ESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEF 316 (482)
T ss_dssp GHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHH
T ss_pred hHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHH
Confidence 999888887644 889999999753 1110 00 00012345799999998788999999999988889999999
Q ss_pred HHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHH
Q 043290 293 AIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILES 372 (430)
Q Consensus 293 ~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~ea 372 (430)
+++|++++++|||+++.....+ ....+|++|.++.++|++|++|+||.++|+|+++++|||||||||++||
T Consensus 317 ~~~l~~~~~~~l~~~~~~~~~~---------~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Ea 387 (482)
T 2pq6_A 317 AWGLANCKKSFLWIIRPDLVIG---------GSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTES 387 (482)
T ss_dssp HHHHHHTTCEEEEECCGGGSTT---------TGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHH
T ss_pred HHHHHhcCCcEEEEEcCCcccc---------ccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHH
Confidence 9999999999999998641100 1123788888888999999999999999999999999999999999999
Q ss_pred HHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhhC
Q 043290 373 LWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 373 l~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
+++|||||++|++.||+.||+++++.+|+|+.++ . .+++++|+++|+++|+
T Consensus 388 l~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~------~~~~~~l~~~i~~ll~ 438 (482)
T 2pq6_A 388 ICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T------NVKREELAKLINEVIA 438 (482)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S------SCCHHHHHHHHHHHHT
T ss_pred HHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C------CCCHHHHHHHHHHHHc
Confidence 9999999999999999999999984459999987 4 6999999999999984
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.4e-42 Score=336.04 Aligned_cols=365 Identities=17% Similarity=0.199 Sum_probs=234.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCC--
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDV-- 78 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 78 (430)
|+++||+|++++++||++|+++||++|++|||+ ||+++++.. ...++. .+++|++++...+.+...
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~--V~~~~~~~~-----~~~~~~-----~g~~~~~~~~~~~~~~~~~~ 77 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHR--VSYAITDEF-----AAQVKA-----AGATPVVYDSILPKESNPEE 77 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCE--EEEEECGGG-----HHHHHH-----HTCEEEECCCCSCCTTCTTC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCe--EEEEeCHHH-----HHHHHh-----CCCEEEecCccccccccchh
Confidence 667899999999999999999999999999999 999998721 122221 258888888653322211
Q ss_pred -CCCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHHhhccccc
Q 043290 79 -LKKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQ 157 (430)
Q Consensus 79 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (430)
...+....+..+........++ +.++++ ..+||+||+|.++.|+..+|+++|||++.+++.+.....+...+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~--~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~- 153 (424)
T 2iya_A 78 SWPEDQESAMGLFLDEAVRVLPQ-LEDAYA--DDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV- 153 (424)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHH-HHHHTT--TSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG-
T ss_pred hcchhHHHHHHHHHHHHHHHHHH-HHHHHh--ccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc-
Confidence 1123233333332222222222 333333 35899999999888999999999999999987654211010000000
Q ss_pred ccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHH----------hhccCcEEEEcccccccHHHHHH
Q 043290 158 DRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQ----------RFKDVDGIIVNTFHELEPYAVNA 227 (430)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~~~le~~~~~~ 227 (430)
.......+ ... ..|.-. ... ..............+.+.+... .....+.+++++..++++..
T Consensus 154 ~~~~~~~~--~~~-~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~--- 225 (424)
T 2iya_A 154 QDPTADRG--EEA-AAPAGT-GDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG--- 225 (424)
T ss_dssp SCCCC--------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG---
T ss_pred cccccccc--ccc-cccccc-ccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc---
Confidence 00000000 000 000000 000 0000000000000011111111 11145677888888887642
Q ss_pred hhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEE
Q 043290 228 FSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (430)
Q Consensus 228 ~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~ 307 (430)
..+.+++++|||+..... +..+|++..+++++|||+|||......+.+.+++++|++.+++++|.+
T Consensus 226 --~~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~ 291 (424)
T 2iya_A 226 --DTVGDNYTFVGPTYGDRS------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSV 291 (424)
T ss_dssp --GGCCTTEEECCCCCCCCG------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEEC
T ss_pred --cCCCCCEEEeCCCCCCcc------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEE
Confidence 123456999999753211 112476655567899999999986677889999999999999999998
Q ss_pred ecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccc
Q 043290 308 RVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAE 387 (430)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~D 387 (430)
+.+... ..+ +..++|+.+++|+||.++|+|+++ ||||||+||++||+++|||+|++|.+.|
T Consensus 292 g~~~~~------------~~~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 352 (424)
T 2iya_A 292 GRFVDP------------ADL-----GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAE 352 (424)
T ss_dssp CTTSCG------------GGG-----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHH
T ss_pred CCcCCh------------HHh-----ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccc
Confidence 765210 001 112458999999999999999998 9999999999999999999999999999
Q ss_pred cchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 388 QQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 388 Q~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
|+.||+++++. |+|+.+..+ .+++++|+++|+++|
T Consensus 353 Q~~na~~l~~~-g~g~~~~~~------~~~~~~l~~~i~~ll 387 (424)
T 2iya_A 353 QTMNAERIVEL-GLGRHIPRD------QVTAEKLREAVLAVA 387 (424)
T ss_dssp HHHHHHHHHHT-TSEEECCGG------GCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHC-CCEEEcCcC------CCCHHHHHHHHHHHH
Confidence 99999999986 999988765 789999999999987
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.7e-41 Score=327.46 Aligned_cols=326 Identities=18% Similarity=0.199 Sum_probs=199.4
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCC-------CC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVD-------PP 74 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~ 74 (430)
+.+||+|+++|++||++|+++||++|++|||+ |||++++.. .... ..++.+..+.... +.
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~--Vt~~t~~~~-----~~~~------~~g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHE--VRYATGGDI-----RAVA------EAGLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEECSST-----HHHH------TTTCEEEESSTTCCSHHHHSCC
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCE--EEEEeCcch-----hhHH------hcCCeeEecCCchhHhhhcccc
Confidence 35789999999999999999999999999999 999998631 1111 1356777665432 11
Q ss_pred CCCC------CCCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHH
Q 043290 75 LPDV------LKKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLG 148 (430)
Q Consensus 75 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 148 (430)
.... ...........+.......+.+.++.+ + ..+||+||+|.++.++..+|+++|||++.+...+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~--~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~ 164 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTA-R--SWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEP 164 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHH-H--HHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCH
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-H--hcCCCEEEECcchHHHHHHHHHcCCCceeeccccccccc
Confidence 1000 001111111111112222222222222 1 138999999999999999999999998877654332111
Q ss_pred HHhhcccccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhh----ccCcEEEEcccccccHHH
Q 043290 149 LMLYLPTRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRF----KDVDGIIVNTFHELEPYA 224 (430)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~le~~~ 224 (430)
.+.... .+.+.+..... .......... .+..
T Consensus 165 ~~~~~~-----------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~ 199 (400)
T 4amg_A 165 GLGALI-----------------------------------------RRAMSKDYERHGVTGEPTGSVRLTT----TPPS 199 (400)
T ss_dssp HHHHHH-----------------------------------------HHHTHHHHHHTTCCCCCSCEEEEEC----CCHH
T ss_pred chhhHH-----------------------------------------HHHHHHHHHHhCCCcccccchhhcc----cCch
Confidence 100000 00000000000 0000011000 0011
Q ss_pred HHHhhc--CCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCC--HHHHHHHHHHHHhCC
Q 043290 225 VNAFSG--DLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFD--VAQVKEIAIGLERSG 300 (430)
Q Consensus 225 ~~~~~~--~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~--~~~~~~~~~al~~~~ 300 (430)
...... ...+..+.+.+..... ...+.+|++..+++++|||||||+...+ .+.+.++++++++.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 200 VEALLPEDRRSPGAWPMRYVPYNG-----------GAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp HHHTSCGGGCCTTCEECCCCCCCC-----------CEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred hhccCcccccCCcccCcccccccc-----------cccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 111110 0123334443332111 1122247888778899999999986433 367888999999999
Q ss_pred CcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCcee
Q 043290 301 YNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIA 380 (430)
Q Consensus 301 ~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v 380 (430)
.++||..++.... ....+ ++|+++++|+||.++|+|+++ ||||||+||++||+++|||+|
T Consensus 269 ~~~v~~~~~~~~~----------~~~~~--------~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v 328 (400)
T 4amg_A 269 AEFVLTLGGGDLA----------LLGEL--------PANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQC 328 (400)
T ss_dssp SEEEEECCTTCCC----------CCCCC--------CTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEE
T ss_pred ceEEEEecCcccc----------ccccC--------CCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEE
Confidence 9999998765211 11223 458999999999999999998 999999999999999999999
Q ss_pred ecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHH
Q 043290 381 TWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVR 426 (430)
Q Consensus 381 ~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~ 426 (430)
++|+++||+.||+++++. |+|+.++.. ..+++.|++.++
T Consensus 329 ~~P~~~dQ~~na~~v~~~-G~g~~l~~~------~~~~~al~~lL~ 367 (400)
T 4amg_A 329 VIPHGSYQDTNRDVLTGL-GIGFDAEAG------SLGAEQCRRLLD 367 (400)
T ss_dssp ECCC---CHHHHHHHHHH-TSEEECCTT------TCSHHHHHHHHH
T ss_pred EecCcccHHHHHHHHHHC-CCEEEcCCC------CchHHHHHHHHc
Confidence 999999999999999997 999998765 677776665543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-40 Score=323.01 Aligned_cols=343 Identities=13% Similarity=0.064 Sum_probs=222.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCCCCCH
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVLKKSP 83 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 83 (430)
+||+|++.++.||++|+++||++|++|||+ ||+++++. ....++ ..+++|+.++.......+......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~--V~~~~~~~-----~~~~v~-----~~g~~~~~i~~~~~~~~~~~~~~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGAD--VRMCAPPD-----CAERLA-----EVGVPHVPVGPSARAPIQRAKPLT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCE--EEEEECGG-----GHHHHH-----HTTCCEEECCC-------CCSCCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCe--EEEEcCHH-----HHHHHH-----HcCCeeeeCCCCHHHHhhcccccc
Confidence 379999999999999999999999999999 99999873 112222 136888888764311111111111
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcC-Ccch--HHHHHHhcCCceEEEecchhHHHHHHhhcccccccc
Q 043290 84 EYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDF-FCVS--MVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQDRI 160 (430)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (430)
...+..+ ......+.++++.+. ..+||+||+|. +..+ +..+|+++|||++.+++++....
T Consensus 69 ~~~~~~~---~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~------------- 131 (415)
T 1iir_A 69 AEDVRRF---TTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP------------- 131 (415)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-------------
T ss_pred hHHHHHH---HHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-------------
Confidence 1122221 222233444444321 24899999998 6778 88999999999999987764210
Q ss_pred cccccCCCcccccCCCCCCccC-CC-CCcccccC--CC-chHHHHHHHHhhccC---------------cEEEEcccccc
Q 043290 161 STVFESSDHELLIPGITSPVPV-CV-LPSCLFNK--DG-GHATLVKLAQRFKDV---------------DGIIVNTFHEL 220 (430)
Q Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~-~~-~~~~~~~~--~~-~~~~~~~~~~~~~~~---------------~~~~~~s~~~l 220 (430)
..++|....++.. .. ..+.+... .. .++.+....+.+++. ..+++++.+++
T Consensus 132 ---------~~~~p~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l 202 (415)
T 1iir_A 132 ---------SPYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVL 202 (415)
T ss_dssp ---------CSSSCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTT
T ss_pred ---------CcccCCccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhh
Confidence 0001111000000 00 00000000 00 000011111111110 13566777776
Q ss_pred cHHHHHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCC
Q 043290 221 EPYAVNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSG 300 (430)
Q Consensus 221 e~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~ 300 (430)
++. ....+ ++++|||+..... +..+.++.+||+++ +++|||||||+. ...+.++.++++|++.+
T Consensus 203 ~~~-----~~~~~-~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 203 APL-----QPTDL-DAVQTGAWILPDE-------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp SCC-----CCCSS-CCEECCCCCCCCC-------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred cCC-----CcccC-CeEeeCCCccCcc-------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 641 01112 6899999865422 23457889999874 479999999987 56777888999999999
Q ss_pred CcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCcee
Q 043290 301 YNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIA 380 (430)
Q Consensus 301 ~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v 380 (430)
++++|++|.... .... .++|+++++|+||.++|+++++ ||||||+||++||+++|||+|
T Consensus 267 ~~~v~~~g~~~~-----------~~~~--------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i 325 (415)
T 1iir_A 267 RRVILSRGWADL-----------VLPD--------DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQI 325 (415)
T ss_dssp CCEEECTTCTTC-----------CCSS--------CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEE
T ss_pred CeEEEEeCCCcc-----------cccC--------CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEE
Confidence 999999876521 0011 2348899999999999988887 999999999999999999999
Q ss_pred ecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHh
Q 043290 381 TWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCL 428 (430)
Q Consensus 381 ~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~v 428 (430)
++|++.||+.||+++++. |+|+.++.+ .+++++|+++|+++
T Consensus 326 ~~p~~~dQ~~na~~l~~~-g~g~~~~~~------~~~~~~l~~~i~~l 366 (415)
T 1iir_A 326 LLPQMADQPYYAGRVAEL-GVGVAHDGP------IPTFDSLSAALATA 366 (415)
T ss_dssp ECCCSTTHHHHHHHHHHH-TSEEECSSS------SCCHHHHHHHHHHH
T ss_pred ECCCCCccHHHHHHHHHC-CCcccCCcC------CCCHHHHHHHHHHH
Confidence 999999999999999886 999988754 78999999999886
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.1e-39 Score=314.38 Aligned_cols=342 Identities=12% Similarity=0.038 Sum_probs=224.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCC-CCCC
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDV-LKKS 82 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~ 82 (430)
+||+|++.++.||++|+++||++|++|||+ ||+++++. ....++. .+++|+.++......... ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~--V~~~~~~~-----~~~~v~~-----~g~~~~~~~~~~~~~~~~~~~~~ 68 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQ--TRMCAPPA-----AEERLAE-----VGVPHVPVGLPQHMMLQEGMPPP 68 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCE--EEEEECGG-----GHHHHHH-----HTCCEEECSCCGGGCCCTTSCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCe--EEEEeCHH-----HHHHHHH-----cCCeeeecCCCHHHHHhhccccc
Confidence 369999999999999999999999999999 99999862 1122221 358888887542111100 1111
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcC-Ccch--HHHHHHhcCCceEEEecchhHHHHHHhhccccccc
Q 043290 83 PEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDF-FCVS--MVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQDR 159 (430)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (430)
....+..+.. ..+.+.++.+.+. ..+||+||+|. +..+ +..+|+++|||++.+++++....
T Consensus 69 ~~~~~~~~~~---~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------------ 132 (416)
T 1rrv_A 69 PPEEEQRLAA---MTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------------ 132 (416)
T ss_dssp CHHHHHHHHH---HHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC------------
T ss_pred hhHHHHHHHH---HHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC------------
Confidence 1112222211 1223334444321 24899999996 4556 78899999999998887654210
Q ss_pred ccccccCCCcccccC-CCCCCccCCCCCcccccC--C-CchHHHHHHHHh----------------hccCcEEEEccccc
Q 043290 160 ISTVFESSDHELLIP-GITSPVPVCVLPSCLFNK--D-GGHATLVKLAQR----------------FKDVDGIIVNTFHE 219 (430)
Q Consensus 160 ~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~----------------~~~~~~~~~~s~~~ 219 (430)
..++| .++.++......+.+... . ..++.+....+. .... .+++++.++
T Consensus 133 ----------~~~~p~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (416)
T 1rrv_A 133 ----------SPHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPV 201 (416)
T ss_dssp ----------CSSSCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTT
T ss_pred ----------CcccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcc
Confidence 00011 000000000000000000 0 000000111111 1112 466777777
Q ss_pred ccHHHHHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCcc-CCHHHHHHHHHHHHh
Q 043290 220 LEPYAVNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGS-FDVAQVKEIAIGLER 298 (430)
Q Consensus 220 le~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~-~~~~~~~~~~~al~~ 298 (430)
+++.. ..+ ++++|||+..... ...+.++.+||+++ +++|||+|||... ...+.+.+++++|++
T Consensus 202 l~~~~------~~~-~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~ 265 (416)
T 1rrv_A 202 LAPLQ------PDV-DAVQTGAWLLSDE-------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRA 265 (416)
T ss_dssp TSCCC------SSC-CCEECCCCCCCCC-------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHH
T ss_pred ccCCC------CCC-CeeeECCCccCcc-------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHH
Confidence 76430 112 6899999865432 23457889999874 4799999999864 345668889999999
Q ss_pred CCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCc
Q 043290 299 SGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVP 378 (430)
Q Consensus 299 ~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP 378 (430)
.++++||++|.... ... ..++|+.+++|+||.++|+++++ ||||||+||++||+++|||
T Consensus 266 ~~~~~v~~~g~~~~-----------~~~--------~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P 324 (416)
T 1rrv_A 266 QGRRVILSRGWTEL-----------VLP--------DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVP 324 (416)
T ss_dssp TTCCEEEECTTTTC-----------CCS--------CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCC
T ss_pred CCCeEEEEeCCccc-----------ccc--------CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCC
Confidence 99999999876521 001 12358899999999999988888 9999999999999999999
Q ss_pred eeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHh
Q 043290 379 IATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCL 428 (430)
Q Consensus 379 ~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~v 428 (430)
+|++|++.||+.||+++++. |+|+.++.+ .+++++|+++|+++
T Consensus 325 ~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~------~~~~~~l~~~i~~l 367 (416)
T 1rrv_A 325 QLVIPRNTDQPYFAGRVAAL-GIGVAHDGP------TPTFESLSAALTTV 367 (416)
T ss_dssp EEECCCSBTHHHHHHHHHHH-TSEEECSSS------CCCHHHHHHHHHHH
T ss_pred EEEccCCCCcHHHHHHHHHC-CCccCCCCC------CCCHHHHHHHHHHh
Confidence 99999999999999999986 999988754 68999999999886
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.3e-38 Score=307.23 Aligned_cols=332 Identities=12% Similarity=0.065 Sum_probs=217.6
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCCCCCHH
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVLKKSPE 84 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 84 (430)
||+|++.++.||++|++.||++|++|||+ |++++++. ....++ ..+++|..++...............
T Consensus 2 rIli~~~gt~Ghv~p~~~La~~L~~~Gh~--V~v~~~~~-----~~~~v~-----~~g~~~~~l~~~~~~~~~~~~~~~~ 69 (404)
T 3h4t_A 2 GVLITGCGSRGDTEPLVALAARLRELGAD--ARMCLPPD-----YVERCA-----EVGVPMVPVGRAVRAGAREPGELPP 69 (404)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHTTCC--EEEEECGG-----GHHHHH-----HTTCCEEECSSCSSGGGSCTTCCCT
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHCCCe--EEEEeCHH-----HHHHHH-----HcCCceeecCCCHHHHhccccCCHH
Confidence 59999999999999999999999999999 88999762 222332 2458888887442100000000000
Q ss_pred HHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchH---HHHHHhcCCceEEEecchhHHHHHHhhccccccccc
Q 043290 85 YFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSM---VDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQDRIS 161 (430)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (430)
.....+.......++++. ++. .++|+||+|..+.++ ..+|+++|||++.+..++....+.
T Consensus 70 ~~~~~~~~~~~~~~~~l~-~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~------------ 132 (404)
T 3h4t_A 70 GAAEVVTEVVAEWFDKVP-AAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE------------ 132 (404)
T ss_dssp TCGGGHHHHHHHHHHHHH-HHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG------------
T ss_pred HHHHHHHHHHHHHHHHHH-HHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh------------
Confidence 011111111222222222 222 279999999665544 688999999999888765421000
Q ss_pred ccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhhccC---------------cEEEEcccccccHHHHH
Q 043290 162 TVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRFKDV---------------DGIIVNTFHELEPYAVN 226 (430)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~le~~~~~ 226 (430)
.+. . ........ .++.+.+..+.++.. ...+.+....+.+.
T Consensus 133 -------------~~~-~------~~~~~~~~-~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~--- 188 (404)
T 3h4t_A 133 -------------QSQ-A------ERDMYNQG-ADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL--- 188 (404)
T ss_dssp -------------SCH-H------HHHHHHHH-HHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC---
T ss_pred -------------hHH-H------HHHHHHHH-HHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC---
Confidence 000 0 00000000 011111111111110 11122222222221
Q ss_pred HhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEE
Q 043290 227 AFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWS 306 (430)
Q Consensus 227 ~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~ 306 (430)
..+.++++++|++..... ...++++.+|++. ++++|||+|||+.. ..+.+..+++++++.++++||+
T Consensus 189 ---~~~~~~~~~~G~~~~~~~-------~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~ 255 (404)
T 3h4t_A 189 ---RPTDLGTVQTGAWILPDQ-------RPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLS 255 (404)
T ss_dssp ---CTTCCSCCBCCCCCCCCC-------CCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEE
T ss_pred ---CCCCCCeEEeCccccCCC-------CCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEE
Confidence 112345788998754332 3456789999986 45799999999987 6778889999999999999999
Q ss_pred EecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeeccccc
Q 043290 307 LRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (430)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~ 386 (430)
.++.... .+ ..++|+++++|+||.++|+++++ ||||||+||+.||+++|||+|++|+++
T Consensus 256 ~g~~~~~-------------~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~ 314 (404)
T 3h4t_A 256 SGWAGLG-------------RI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKA 314 (404)
T ss_dssp CTTTTCC-------------CS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred eCCcccc-------------cc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcc
Confidence 8765211 01 12458999999999999999998 999999999999999999999999999
Q ss_pred ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhhC
Q 043290 387 EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 387 DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
||+.||.++++. |+|+.+..+ .+++++|.++|+++|+
T Consensus 315 dQ~~na~~~~~~-G~g~~l~~~------~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 315 DQPYYAGRVADL-GVGVAHDGP------TPTVESLSAALATALT 351 (404)
T ss_dssp THHHHHHHHHHH-TSEEECSSS------SCCHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHC-CCEeccCcC------CCCHHHHHHHHHHHhC
Confidence 999999999997 999998765 7899999999999874
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.8e-35 Score=285.40 Aligned_cols=346 Identities=18% Similarity=0.226 Sum_probs=223.1
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCC---C
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLP---D 77 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~ 77 (430)
|+.+||+|++.++.||++|++.||++|++|||+ |++++++ .+.+.+. ..+++|..++...+... .
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~Ghe--V~v~~~~--------~~~~~~~--~~G~~~~~~~~~~~~~~~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHR--ITYVTTP--------LFADEVK--AAGAEVVLYKSEFDTFHVPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECH--------HHHHHHH--HTTCEEEECCCGGGTSSSSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCE--EEEEcCH--------HHHHHHH--HcCCEEEeccccccccccccc
Confidence 666689999999999999999999999999999 9999975 2222221 23588888875422111 1
Q ss_pred CCCCCHHHHHHH-HHHhhhhhHHHHHHHhhccCCCCceEEEEc-CCcchHHHHHHhcCCceEEEecchhHHHHHHhhccc
Q 043290 78 VLKKSPEYFLSL-VVESHLPNVKNIVSSRANSGSLQVTGLVLD-FFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPT 155 (430)
Q Consensus 78 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 155 (430)
....+....+.. +.......+.++.+.+ + ..+||+||+| .+..++..+|+++|||++.+.+..... ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~--~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~ 142 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEAL-G--DNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAAN----EHYSL 142 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHH-T--TCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCB----TTBCH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHH-h--ccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccC----ccccc
Confidence 111233333333 3333332333332222 2 3589999999 777788899999999988886443210 00000
Q ss_pred ccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHH----------hhccC-cEEEEcccccccHHH
Q 043290 156 RQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQ----------RFKDV-DGIIVNTFHELEPYA 224 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~s~~~le~~~ 224 (430)
. +...+... ...+..... ..+.+.+... ..... +..+...-.+++..
T Consensus 143 ~-------------~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~- 200 (402)
T 3ia7_A 143 F-------------KELWKSNG-----QRHPADVEA---VHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF- 200 (402)
T ss_dssp H-------------HHHHHHHT-----CCCGGGSHH---HHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-
T ss_pred c-------------cccccccc-----ccChhhHHH---HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-
Confidence 0 00000000 000000000 0001111000 01111 33333333333321
Q ss_pred HHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEE
Q 043290 225 VNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFL 304 (430)
Q Consensus 225 ~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~v 304 (430)
...+..++.++||+...... ...|+...+++++|||++||......+.+.++++++++.+.+++
T Consensus 201 ----~~~~~~~~~~vGp~~~~~~~------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 201 ----AETFDERFAFVGPTLTGRDG------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp ----GGGCCTTEEECCCCCCC----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred ----cccCCCCeEEeCCCCCCccc------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 11234459999997643221 12244434467899999999987777889999999999999999
Q ss_pred EEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeeccc
Q 043290 305 WSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPI 384 (430)
Q Consensus 305 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~ 384 (430)
|..+.+... ..+ +..++|+.+.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|.
T Consensus 265 ~~~g~~~~~------------~~~-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 265 MAIGGFLDP------------AVL-----GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp EECCTTSCG------------GGG-----CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGG
T ss_pred EEeCCcCCh------------hhh-----CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCC
Confidence 998765211 001 113458999999999999999998 9999999999999999999999999
Q ss_pred -ccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 385 -YAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 385 -~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
..||+.||.++++. |+|+.+..+ .+++++|+++|+++|
T Consensus 326 ~~~~q~~~a~~~~~~-g~g~~~~~~------~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 326 FATEAAPSAERVIEL-GLGSVLRPD------QLEPASIREAVERLA 364 (402)
T ss_dssp GCGGGHHHHHHHHHT-TSEEECCGG------GCSHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHc-CCEEEccCC------CCCHHHHHHHHHHHH
Confidence 99999999999997 999988765 789999999999987
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=9.2e-36 Score=288.84 Aligned_cols=345 Identities=15% Similarity=0.172 Sum_probs=220.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCC---CC
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPD---VL 79 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~ 79 (430)
++||+|++.++.||++|++.||++|++|||+ |++++++. +.+.+. ..++++..++...+.... ..
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~--V~v~~~~~--------~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~ 87 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHR--VSYVTAGG--------FAEPVR--AAGATVVPYQSEIIDADAAEVFG 87 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCE--EEEEECGG--------GHHHHH--HTTCEEEECCCSTTTCCHHHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCE--EEEEeCHH--------HHHHHH--hcCCEEEeccccccccccchhhc
Confidence 3589999999999999999999999999999 99999762 222221 235888888754322110 00
Q ss_pred CCCHHHHHHH-HHHhhhhhHHHHHHHhhccCCCCceEEEEc-CCcchHHHHHHhcCCceEEEecchhHHHHHHhhccccc
Q 043290 80 KKSPEYFLSL-VVESHLPNVKNIVSSRANSGSLQVTGLVLD-FFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQ 157 (430)
Q Consensus 80 ~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (430)
.......+.. +.......+.++.+. ++ ..+||+||+| ....++..+|+++|||++.+.+..... ..+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~-l~--~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~-- 158 (415)
T 3rsc_A 88 SDDLGVRPHLMYLRENVSVLRATAEA-LD--GDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN----EHYSF-- 158 (415)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHH-HS--SSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC----SSCCH--
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHH-Hh--ccCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc----Ccccc--
Confidence 0111111222 222222223332222 22 3589999999 777788899999999998887443210 00000
Q ss_pred ccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHH----------hhccC-cEEEEcccccccHHHHH
Q 043290 158 DRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQ----------RFKDV-DGIIVNTFHELEPYAVN 226 (430)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~s~~~le~~~~~ 226 (430)
. +...+... ...+..... ..+.+.+... ..... +..+...-..++..
T Consensus 159 ------~-----~~~~~~~~-----~~~p~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 216 (415)
T 3rsc_A 159 ------S-----QDMVTLAG-----TIDPLDLPV---FRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA--- 216 (415)
T ss_dssp ------H-----HHHHHHHT-----CCCGGGCHH---HHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT---
T ss_pred ------c-----cccccccc-----cCChhhHHH---HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC---
Confidence 0 00000000 000000000 0011111111 01111 33444333333321
Q ss_pred HhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEE
Q 043290 227 AFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWS 306 (430)
Q Consensus 227 ~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~ 306 (430)
......++.++||+..... +..+|+...+++++|||++||......+.+..+++++++.+++++|.
T Consensus 217 --~~~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~ 282 (415)
T 3rsc_A 217 --GDTFDDRFVFVGPCFDDRR------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMT 282 (415)
T ss_dssp --GGGCCTTEEECCCCCCCCG------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred --cccCCCceEEeCCCCCCcc------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEE
Confidence 1123345899999764321 11124444456789999999998777788999999999999999999
Q ss_pred EecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeeccccc
Q 043290 307 LRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (430)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~ 386 (430)
.+.+... ..+ +..++|+.+.+|+||.++|+++++ +|||||+||+.||+++|+|+|++|...
T Consensus 283 ~g~~~~~------------~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 343 (415)
T 3rsc_A 283 LGGQVDP------------AAL-----GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSF 343 (415)
T ss_dssp CTTTSCG------------GGG-----CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSG
T ss_pred eCCCCCh------------HHh-----cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcc
Confidence 8764211 001 112458999999999999999998 999999999999999999999999999
Q ss_pred ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhhC
Q 043290 387 EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 387 DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
||+.||.++++. |+|+.+..+ .+++++|+++|+++|+
T Consensus 344 ~q~~~a~~l~~~-g~g~~~~~~------~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 344 DVQPMARRVDQL-GLGAVLPGE------KADGDTLLAAVGAVAA 380 (415)
T ss_dssp GGHHHHHHHHHH-TCEEECCGG------GCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHc-CCEEEcccC------CCCHHHHHHHHHHHHc
Confidence 999999999997 999988765 7899999999999874
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.2e-34 Score=282.36 Aligned_cols=346 Identities=15% Similarity=0.147 Sum_probs=220.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCC--
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDV-- 78 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 78 (430)
|+.+||++++.++.||++|++.|+++|+++||+ |+++++.. ..+.+. ..+++++.++...+.....
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~--V~~~~~~~--------~~~~~~--~~g~~~~~~~~~~~~~~~~~~ 72 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHR--VTYAIPPV--------FADKVA--ATGPRPVLYHSTLPGPDADPE 72 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCE--EEEEECGG--------GHHHHH--TTSCEEEECCCCSCCTTSCGG
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCe--EEEEeCHH--------HHHHHH--hCCCEEEEcCCcCcccccccc
Confidence 445699999999999999999999999999999 99999762 111111 2468888887643222111
Q ss_pred -CCCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHHhhccccc
Q 043290 79 -LKKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLMLYLPTRQ 157 (430)
Q Consensus 79 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (430)
...+....+..+.......+.. +.++++ ..+||+||+|....++..+|+++|||++.+++.......+...+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~--~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--- 146 (430)
T 2iyf_A 73 AWGSTLLDNVEPFLNDAIQALPQ-LADAYA--DDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA--- 146 (430)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHH-HHHHHT--TSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH---
T ss_pred ccchhhHHHHHHHHHHHHHHHHH-HHHHhh--ccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc---
Confidence 1112233332222222222222 223333 358999999988778889999999999988865431000000000
Q ss_pred ccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHH----------hhccCcEEEEcccccccHHHHHH
Q 043290 158 DRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQ----------RFKDVDGIIVNTFHELEPYAVNA 227 (430)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~~~le~~~~~~ 227 (430)
.+.+ + ... ..+. . ......+.+... .....+.+++++..+++...
T Consensus 147 -----------~~~~-~----~~~--~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~--- 201 (430)
T 2iyf_A 147 -----------EPMW-R----EPR--QTER-G---RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA--- 201 (430)
T ss_dssp -----------HHHH-H----HHH--HSHH-H---HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG---
T ss_pred -----------cchh-h----hhc--cchH-H---HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc---
Confidence 0000 0 000 0000 0 000000111111 11135667888877776531
Q ss_pred hhcCCCCC-eEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhC-CCcEEE
Q 043290 228 FSGDLNPP-LYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERS-GYNFLW 305 (430)
Q Consensus 228 ~~~~~~~~-~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~-~~~~vw 305 (430)
....++ +++|||.+..... ..+|.+..+++++||+++||......+.+.++++++++. +++++|
T Consensus 202 --~~~~~~~v~~vG~~~~~~~~------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 202 --DRVDEDVYTFVGACQGDRAE------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp --GGSCTTTEEECCCCC-----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred --ccCCCccEEEeCCcCCCCCC------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 113356 9999986532210 012444334568999999998855678888999999886 889999
Q ss_pred EEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeecccc
Q 043290 306 SLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY 385 (430)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~ 385 (430)
.+|.+... ..+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..
T Consensus 268 ~~G~~~~~------------~~l-----~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 328 (430)
T 2iyf_A 268 QIGRKVTP------------AEL-----GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQA 328 (430)
T ss_dssp ECC---CG------------GGG-----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred EeCCCCCh------------HHh-----ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCc
Confidence 88765211 011 112458999999999999999998 99999999999999999999999999
Q ss_pred cccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 386 AEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 386 ~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
+||..|+.++++. |+|+.+..+ .+++++|+++|+++|
T Consensus 329 ~~q~~~a~~~~~~-g~g~~~~~~------~~~~~~l~~~i~~ll 365 (430)
T 2iyf_A 329 VDQFGNADMLQGL-GVARKLATE------EATADLLRETALALV 365 (430)
T ss_dssp HHHHHHHHHHHHT-TSEEECCCC-------CCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHc-CCEEEcCCC------CCCHHHHHHHHHHHH
Confidence 9999999999986 999988754 689999999999987
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.2e-34 Score=283.18 Aligned_cols=341 Identities=13% Similarity=0.032 Sum_probs=206.6
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCC-CCC----
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDP-PLP---- 76 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~---- 76 (430)
+.+||+|++.++.||++|+++||++|+++||+ |++++++. ....++ ..+++|+.++.... .+.
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~Ghe--V~~~~~~~-----~~~~v~-----~~G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHE--VRVVASPA-----LTEDIT-----AAGLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCE--EEEEECGG-----GHHHHH-----TTTCCEEECSCCCCHHHHHHHT
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCe--EEEEeCch-----hHHHHH-----hCCCceeecCCccchHHHhhhh
Confidence 34689999999999999999999999999999 99999762 112222 24688888875420 000
Q ss_pred ----------CC-----CC-CCHHHH---HHHHHHhhh-----h-hHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHh
Q 043290 77 ----------DV-----LK-KSPEYF---LSLVVESHL-----P-NVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKE 131 (430)
Q Consensus 77 ----------~~-----~~-~~~~~~---~~~~~~~~~-----~-~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~ 131 (430)
.+ .. .....+ +..+..... . .+.++++.+.+ .+||+||+|.++.++..+|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~ 163 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAV 163 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHH
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHH
Confidence 00 00 011111 111111101 1 33333332211 389999999987888999999
Q ss_pred cCCceEEEecchhHHHHHHhhcccccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhhcc---
Q 043290 132 LSLPSYIFLTSNLGFLGLMLYLPTRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRFKD--- 208 (430)
Q Consensus 132 lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 208 (430)
+|||++.+...+.........+... ..+.|... .. ....+.+.+....+..
T Consensus 164 lgiP~v~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-------~~------~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 164 TGTPHARLLWGPDITTRARQNFLGL-------------LPDQPEEH-------RE------DPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp HTCCEEEECSSCCHHHHHHHHHHHH-------------GGGSCTTT-------CC------CHHHHHHHHHHHHTTCCCC
T ss_pred cCCCEEEEecCCCcchhhhhhhhhh-------------cccccccc-------cc------chHHHHHHHHHHHcCCCCC
Confidence 9999988865443211111000000 00011000 00 0011111111111111
Q ss_pred ------CcEEEEcccccccHHHHHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCc
Q 043290 209 ------VDGIIVNTFHELEPYAVNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSG 282 (430)
Q Consensus 209 ------~~~~~~~s~~~le~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~ 282 (430)
.+..+..+...++.. ..++. ..+++.... + +.++.+|++..+++++|||++||..
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~-------~~~~~-~~~~~~~~~-~----------~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD-------TGLKT-VGMRYVDYN-G----------PSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC-------CCCCE-EECCCCCCC-S----------SCCCCGGGSSCCSSCEEEEEC----
T ss_pred CccccCCCeEEEecCccccCC-------CCCCC-CceeeeCCC-C----------CcccchHhhcCCCCCEEEEECCCCc
Confidence 111222222222210 11111 122222110 1 1123468876556789999999987
Q ss_pred cC---CHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeE
Q 043290 283 SF---DVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGG 359 (430)
Q Consensus 283 ~~---~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~ 359 (430)
.. ..+.+..++++|++.++++||+.++... ..+. ..++|+++++|+||.++|+++++
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~-------------~~l~-----~~~~~v~~~~~~~~~~ll~~ad~-- 338 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQL-------------EGVA-----NIPDNVRTVGFVPMHALLPTCAA-- 338 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTT-------------SSCS-----SCCSSEEECCSCCHHHHGGGCSE--
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcch-------------hhhc-----cCCCCEEEecCCCHHHHHhhCCE--
Confidence 53 3355777899999999999999875421 1111 12458999999999999999988
Q ss_pred EEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 360 FVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 360 ~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
||||||+||++||+++|||+|++|++.||+.||+++++. |+|+.+..+ .+++++|+++|+++|
T Consensus 339 ~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~------~~~~~~l~~~i~~ll 401 (441)
T 2yjn_A 339 TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVP------ELTPDQLRESVKRVL 401 (441)
T ss_dssp EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT------TCCHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccc------cCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999997 999988765 789999999999986
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.6e-33 Score=270.29 Aligned_cols=324 Identities=13% Similarity=0.092 Sum_probs=209.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCC--------
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPL-------- 75 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------- 75 (430)
+||++++.++.||++|+++|+++|+++||+ |++++++. .....+ ..+++++.++.....+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~--V~~~~~~~-----~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~ 68 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQ--VVMAANQD-----MGPVVT-----GVGLPAVATTDLPIRHFITTDREG 68 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECGG-----GHHHHH-----HTTCCEEESCSSCHHHHHHBCTTS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCE--EEEEeCHH-----HHHHHH-----hCCCEEEEeCCcchHHHHhhhccc
Confidence 369999999999999999999999999999 99999762 111222 1357787776432000
Q ss_pred C-CCCCCC--HHHHH-HH-HHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhHHHHHH
Q 043290 76 P-DVLKKS--PEYFL-SL-VVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLGFLGLM 150 (430)
Q Consensus 76 ~-~~~~~~--~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 150 (430)
. +..... ....+ .. +.......+.++.+.+.+ .+||+||+|.+..++..+|+++|||++.+...+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~----- 140 (384)
T 2p6p_A 69 RPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD----- 140 (384)
T ss_dssp CBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----
T ss_pred CccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----
Confidence 0 000011 11111 11 111112222222222211 38999999988778888999999998877532110
Q ss_pred hhcccccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHH--hhccCcEEEEcccccccHHHHHHh
Q 043290 151 LYLPTRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQ--RFKDVDGIIVNTFHELEPYAVNAF 228 (430)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~le~~~~~~~ 228 (430)
+. .+ ...+.. ..+.+.+... ..+..+.+++++...++...
T Consensus 141 -----------------------~~---~~-----~~~~~~---~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~---- 182 (384)
T 2p6p_A 141 -----------------------AD---GI-----HPGADA---ELRPELSELGLERLPAPDLFIDICPPSLRPAN---- 182 (384)
T ss_dssp -----------------------CT---TT-----HHHHHH---HTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT----
T ss_pred -----------------------cc---hh-----hHHHHH---HHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC----
Confidence 00 00 000000 0011111000 00113456777766665421
Q ss_pred hcCCC-CCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccC-----CHHHHHHHHHHHHhCCCc
Q 043290 229 SGDLN-PPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSF-----DVAQVKEIAIGLERSGYN 302 (430)
Q Consensus 229 ~~~~~-~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~-----~~~~~~~~~~al~~~~~~ 302 (430)
. .. .++.+++. .. +.++.+|++..+++++|||++||.... +.+.+.+++++|++.+++
T Consensus 183 -~-~~~~~~~~~~~----~~----------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~ 246 (384)
T 2p6p_A 183 -A-APARMMRHVAT----SR----------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVE 246 (384)
T ss_dssp -S-CCCEECCCCCC----CC----------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCE
T ss_pred -C-CCCCceEecCC----CC----------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcE
Confidence 0 10 12333321 11 012346887644568999999998754 457788999999999999
Q ss_pred EEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeec
Q 043290 303 FLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (430)
Q Consensus 303 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 382 (430)
++|+.++.. .+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++
T Consensus 247 ~~~~~g~~~-----------------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~ 305 (384)
T 2p6p_A 247 LIVAAPDTV-----------------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLI 305 (384)
T ss_dssp EEEECCHHH-----------------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEEC
T ss_pred EEEEeCCCC-----------------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEc
Confidence 999976430 0111 234679999 99999999999888 99999999999999999999999
Q ss_pred ccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 383 PIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 383 P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
|.+.||+.||.++++. |+|+.+..+ .+++++|+++|+++|
T Consensus 306 p~~~dq~~~a~~~~~~-g~g~~~~~~------~~~~~~l~~~i~~ll 345 (384)
T 2p6p_A 306 PKGSVLEAPARRVADY-GAAIALLPG------EDSTEAIADSCQELQ 345 (384)
T ss_dssp CCSHHHHHHHHHHHHH-TSEEECCTT------CCCHHHHHHHHHHHH
T ss_pred cCcccchHHHHHHHHC-CCeEecCcC------CCCHHHHHHHHHHHH
Confidence 9999999999999986 999988754 689999999999987
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=5.7e-32 Score=260.67 Aligned_cols=322 Identities=12% Similarity=0.095 Sum_probs=188.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCC--------C-
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVD--------P- 73 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~- 73 (430)
++||+|++.++.||++|++.|+++|+++||+ |++++++. +.+.+.. .++.+..++... .
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~Ghe--V~v~~~~~--------~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~ 82 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHE--VLVAASEN--------MGPTVTG--AGLPFAPTCPSLDMPEVLSWDR 82 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEEEGG--------GHHHHHH--TTCCEEEEESSCCHHHHHSBCT
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCE--EEEEcCHH--------HHHHHHh--CCCeeEecCCccchHhhhhhhc
Confidence 5789999999999999999999999999999 88998752 2222211 346666655210 0
Q ss_pred CC-CCCCCCCHHHHHHH-------HHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhH
Q 043290 74 PL-PDVLKKSPEYFLSL-------VVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLG 145 (430)
Q Consensus 74 ~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 145 (430)
.. ...........+.. ........+.+.++++ +||+||+|....++..+|+++|||++.+......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~ 156 (398)
T 4fzr_A 83 EGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLAS 156 (398)
T ss_dssp TSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC
T ss_pred cCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCC
Confidence 00 00000111111111 1111122233333333 8999999988888889999999998877644321
Q ss_pred HHHHHhhcccccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhh-----ccCcEEEEcccccc
Q 043290 146 FLGLMLYLPTRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRF-----KDVDGIIVNTFHEL 220 (430)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~l 220 (430)
........ .+.+.+....+ ......+...-..+
T Consensus 157 ~~~~~~~~------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T 4fzr_A 157 PELIKSAG------------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPPSM 194 (398)
T ss_dssp CHHHHHHH------------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCGGG
T ss_pred chhhhHHH------------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCChhh
Confidence 00000000 00000000000 00111122111222
Q ss_pred cHHHHHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccC--------CHHHHHHH
Q 043290 221 EPYAVNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSF--------DVAQVKEI 292 (430)
Q Consensus 221 e~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~--------~~~~~~~~ 292 (430)
.... .....++.++++.. . ..++.+|+...+++++|||++||.... ..+.+..+
T Consensus 195 ~~~~-----~~~~~~~~~~~~~~---~----------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 4fzr_A 195 EAQP-----KPGTTKMRYVPYNG---R----------NDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQAL 256 (398)
T ss_dssp C---------CCCEECCCCCCCC---S----------SCCCCHHHHSCCSSCEEECC----------------CCSHHHH
T ss_pred CCCC-----CCCCCCeeeeCCCC---C----------CCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHH
Confidence 2110 00000012222110 0 112234665545678999999998633 23557889
Q ss_pred HHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHH
Q 043290 293 AIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILES 372 (430)
Q Consensus 293 ~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~ea 372 (430)
++++++.++++||+.++... ..+ +..++|+++.+|+|+.++|+++++ ||||||.||+.||
T Consensus 257 ~~al~~~~~~~v~~~~~~~~-------------~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea 316 (398)
T 4fzr_A 257 SQELPKLGFEVVVAVSDKLA-------------QTL-----QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTC 316 (398)
T ss_dssp HHHGGGGTCEEEECCCC--------------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHH
T ss_pred HHHHHhCCCEEEEEeCCcch-------------hhh-----ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHH
Confidence 99999999999998876521 111 123568999999999999999998 9999999999999
Q ss_pred HHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 373 LWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 373 l~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
+++|+|+|++|.+.||+.|+.++++. |+|+.+..+ .+++++|+++|+++|
T Consensus 317 ~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~------~~~~~~l~~ai~~ll 366 (398)
T 4fzr_A 317 LSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWE------QAGVESVLAACARIR 366 (398)
T ss_dssp HHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC-------------CHHHHHHHHH
T ss_pred HHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc------cCCHHHHHHHHHHHH
Confidence 99999999999999999999999997 999998765 789999999999987
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.97 E-value=1.1e-30 Score=251.59 Aligned_cols=316 Identities=15% Similarity=0.107 Sum_probs=197.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCC---------
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDP--------- 73 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------- 73 (430)
.+||+|++.++.||++|++.|+++|+++||+ |+++++ ... ..++ ..++.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~Ghe--V~v~~~--~~~----~~~~-----~~G~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHD--VLIAVA--EHA----DRAA-----AAGLEVVDVAPDYSAVKVFEQVA 86 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEES--SCH----HHHH-----TTTCEEEESSTTCCHHHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCE--EEEecc--chH----HHHH-----hCCCeeEecCCccCHHHHhhhcc
Confidence 3689999999999999999999999999999 889987 221 1222 24688888874310
Q ss_pred ------------CCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEec
Q 043290 74 ------------PLPDVLKKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLT 141 (430)
Q Consensus 74 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~ 141 (430)
... .........+..........+.+.++++ +||+||+|....++..+|+++|||++....
T Consensus 87 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~ 159 (398)
T 3oti_A 87 KDNPRFAETVATRPA-IDLEEWGVQIAAVNRPLVDGTMALVDDY------RPDLVVYEQGATVGLLAADRAGVPAVQRNQ 159 (398)
T ss_dssp HHCHHHHHTGGGSCC-CSGGGGHHHHHHHHGGGHHHHHHHHHHH------CCSEEEEETTCHHHHHHHHHHTCCEEEECC
T ss_pred cCCccccccccCChh-hhHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCEEEECchhhHHHHHHHHcCCCEEEEec
Confidence 000 0011112222222223333444444444 899999998888888999999999887653
Q ss_pred chhHHHHHHhhcccccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHH-HhhccCcEEEEcccccc
Q 043290 142 SNLGFLGLMLYLPTRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLA-QRFKDVDGIIVNTFHEL 220 (430)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~l 220 (430)
..... . .+ ...... ......+.. .........+...-.++
T Consensus 160 ~~~~~---------------------------~----~~-----~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T 3oti_A 160 SAWRT---------------------------R----GM-----HRSIAS---FLTDLMDKHQVSLPEPVATIESFPPSL 200 (398)
T ss_dssp TTCCC---------------------------T----TH-----HHHHHT---TCHHHHHHTTCCCCCCSEEECSSCGGG
T ss_pred cCCCc---------------------------c----ch-----hhHHHH---HHHHHHHHcCCCCCCCCeEEEeCCHHH
Confidence 32100 0 00 000000 000000000 00001111111111111
Q ss_pred cHHHHHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccC--CHHHHHHHHHHHHh
Q 043290 221 EPYAVNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSF--DVAQVKEIAIGLER 298 (430)
Q Consensus 221 e~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~--~~~~~~~~~~al~~ 298 (430)
... ......++.++ +..+. ..+.+|+...+++++|||++||.... ..+.+.+++++|++
T Consensus 201 ~~~-----~~~~~~~~~~~----~~~~~----------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 201 LLE-----AEPEGWFMRWV----PYGGG----------AVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp GTT-----SCCCSBCCCCC----CCCCC----------EECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred CCC-----CCCCCCCcccc----CCCCC----------cCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 110 00000011111 00110 11123555445678999999998642 55668889999999
Q ss_pred CCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCc
Q 043290 299 SGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVP 378 (430)
Q Consensus 299 ~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP 378 (430)
.++++||+.++... ..+. ..++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|
T Consensus 262 ~~~~~v~~~g~~~~-------------~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P 321 (398)
T 3oti_A 262 VDADFVLALGDLDI-------------SPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIP 321 (398)
T ss_dssp SSSEEEEECTTSCC-------------GGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCcCh-------------hhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCC
Confidence 99999999876521 0111 12458999999999999999998 9999999999999999999
Q ss_pred eeecccccccchhH--HHHhhhhceeEEeecccccCCcccCHhHHHH
Q 043290 379 IATWPIYAEQQLNA--FRMVKEQGLALDLRLDYRVGSDLVMACDIES 423 (430)
Q Consensus 379 ~v~~P~~~DQ~~~a--~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ 423 (430)
+|++|++.||..|| .++++. |+|+.++.+ ..+++.|++
T Consensus 322 ~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~~------~~~~~~l~~ 361 (398)
T 3oti_A 322 QLLAPDPRDQFQHTAREAVSRR-GIGLVSTSD------KVDADLLRR 361 (398)
T ss_dssp EEECCCTTCCSSCTTHHHHHHH-TSEEECCGG------GCCHHHHHH
T ss_pred EEEcCCCchhHHHHHHHHHHHC-CCEEeeCCC------CCCHHHHHH
Confidence 99999999999999 999987 999998765 667777763
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.97 E-value=5.4e-30 Score=246.26 Aligned_cols=322 Identities=13% Similarity=0.147 Sum_probs=199.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeC-CCCCC--------
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDL-PPVDP-------- 73 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~-------- 73 (430)
++||+|++.++.||++|++.|+++|+++||+ |++++++ .+.+.+. ..++.+..+ .....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~Ghe--V~v~~~~--------~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 68 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHE--VLIAAPP--------ELQATAH--GAGLTTAGIRGNDRTGDTGGTTQ 68 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCE--EEEEECH--------HHHHHHH--HBTCEEEEC--------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCE--EEEecCh--------hhHHHHH--hCCCceeeecCCccchhhhhhhc
Confidence 4679999999999999999999999999999 8899865 2222211 235777776 32110
Q ss_pred -CCCC---CCCC--CHHHHHHHHHHhh-------hhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEe
Q 043290 74 -PLPD---VLKK--SPEYFLSLVVESH-------LPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFL 140 (430)
Q Consensus 74 -~~~~---~~~~--~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~ 140 (430)
.... .... .....+....... ...+.+.++++ +||+||+|....++..+|+++|||++.+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 69 LRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW------RPSVLLVDVCALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCSEEEEETTCHHHHHHHHHTTCCEEEEC
T ss_pred ccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc------CCCEEEeCcchhHHHHHHHHhCCCEEEEe
Confidence 0000 0000 0111111111122 22333334443 89999999877778889999999988775
Q ss_pred cchhHHHHHHhhcccccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhhc-----cCcEEEEc
Q 043290 141 TSNLGFLGLMLYLPTRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRFK-----DVDGIIVN 215 (430)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 215 (430)
....... . .+.. . ..+.+.+....+. ..+.++..
T Consensus 143 ~~~~~~~-------------------------------~--------~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (391)
T 3tsa_A 143 WGVDPTA-------------------------------G--------PFSD-R-AHELLDPVCRHHGLTGLPTPELILDP 181 (391)
T ss_dssp CSCCCTT-------------------------------T--------HHHH-H-HHHHHHHHHHHTTSSSSCCCSEEEEC
T ss_pred cCCcccc-------------------------------c--------cccc-h-HHHHHHHHHHHcCCCCCCCCceEEEe
Confidence 3321000 0 0000 0 0011111111111 01222222
Q ss_pred ccccccHHHHHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCcc---CCHHHHHHH
Q 043290 216 TFHELEPYAVNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGS---FDVAQVKEI 292 (430)
Q Consensus 216 s~~~le~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~---~~~~~~~~~ 292 (430)
.-.+++.. .+....++.++ |. ... ..+..|+...+++++||+++||... ...+.+..+
T Consensus 182 ~~~~~~~~-----~~~~~~~~~~~-p~---~~~----------~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 242 (391)
T 3tsa_A 182 CPPSLQAS-----DAPQGAPVQYV-PY---NGS----------GAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAV 242 (391)
T ss_dssp SCGGGSCT-----TSCCCEECCCC-CC---CCC----------EECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHH
T ss_pred cChhhcCC-----CCCccCCeeee-cC---CCC----------cCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHH
Confidence 22222211 00000012222 11 110 1122466554567899999999842 336778888
Q ss_pred HHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHH
Q 043290 293 AIGLERS-GYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILE 371 (430)
Q Consensus 293 ~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~e 371 (430)
+++ ++. +++++|..++... ..+. ..++|+++.+|+|+.++|+++++ ||||||.||++|
T Consensus 243 ~~~-~~~p~~~~v~~~~~~~~-------------~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~E 301 (391)
T 3tsa_A 243 AAA-TELPGVEAVIAVPPEHR-------------ALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFT 301 (391)
T ss_dssp HHH-HTSTTEEEEEECCGGGG-------------GGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHH
T ss_pred HHh-ccCCCeEEEEEECCcch-------------hhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHH
Confidence 888 887 8899998765410 1111 12458999999999999999988 999999999999
Q ss_pred HHHhCCceeecccccccchhHHHHhhhhceeEEeec--ccccCCcccCHhHHHHHHHHhhC
Q 043290 372 SLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRL--DYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 372 al~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~--~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
|+++|+|+|++|...||+.|+.++++. |+|+.+.. + ..+++.|+++|+++|+
T Consensus 302 a~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~------~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 302 ATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQA------QSDHEQFTDSIATVLG 355 (391)
T ss_dssp HHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHH------HTCHHHHHHHHHHHHT
T ss_pred HHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcccc------cCCHHHHHHHHHHHHc
Confidence 999999999999999999999999997 99998875 4 6899999999999874
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.96 E-value=1.4e-27 Score=231.07 Aligned_cols=325 Identities=18% Similarity=0.148 Sum_probs=205.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCC-----------
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPV----------- 71 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------- 71 (430)
++||++++.++.||++|++.|+++|+++||+ |++++++. .....+ ..++++..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~Ghe--V~v~~~~~-----~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~ 87 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHE--VTFATGEG-----FAGTLR-----KLGFEPVATGMPVFDGFLAALRI 87 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEECGG-----GHHHHH-----HTTCEEEECCCCHHHHHHHHHHH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCE--EEEEccHH-----HHHHHH-----hcCCceeecCcccccchhhhhhh
Confidence 5789999999999999999999999999999 98999762 112222 246888887741
Q ss_pred --C---CCCC--CCCCCCHHHHHHHH-HHhhhhhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecch
Q 043290 72 --D---PPLP--DVLKKSPEYFLSLV-VESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSN 143 (430)
Q Consensus 72 --~---~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~ 143 (430)
. .+.. ..........+... .......+.+.+++. +||+||+|....++..+|+++|||++......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 88 RFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL------RPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred hhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc------CCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 0 0000 00001111111111 111223334444444 89999999877777888999999988765432
Q ss_pred hHHHHHHhhcccccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHh----------hccCcEEE
Q 043290 144 LGFLGLMLYLPTRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQR----------FKDVDGII 213 (430)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 213 (430)
......... ..+.+.+.... +...+.++
T Consensus 162 ~~~~~~~~~------------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~d~~i 199 (412)
T 3otg_A 162 DTPDDLTRS------------------------------------------IEEEVRGLAQRLGLDLPPGRIDGFGNPFI 199 (412)
T ss_dssp CCCSHHHHH------------------------------------------HHHHHHHHHHHTTCCCCSSCCGGGGCCEE
T ss_pred cCchhhhHH------------------------------------------HHHHHHHHHHHcCCCCCcccccCCCCeEE
Confidence 200000000 00000000000 01122233
Q ss_pred EcccccccHHHHHHhhcCCCCCeEEeCccccCCCCCCCCCChhcHhHHHHH-hhcCCCCcEEEEeecCCccCCHHHHHHH
Q 043290 214 VNTFHELEPYAVNAFSGDLNPPLYTVGPVLHLKSQPNPDLDEAQYQKIFQW-LDDLAESSVVFLCFGSSGSFDVAQVKEI 292 (430)
Q Consensus 214 ~~s~~~le~~~~~~~~~~~~~~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vVyvsfGS~~~~~~~~~~~~ 292 (430)
..+-.+++......... ..++.++++- .. ....+| ....+++++||+++||......+.+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 200 DIFPPSLQEPEFRARPR--RHELRPVPFA---EQ-----------GDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp ECSCGGGSCHHHHTCTT--EEECCCCCCC---CC-----------CCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred eeCCHHhcCCcccCCCC--cceeeccCCC---CC-----------CCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 32222222211000000 0001122111 00 011234 2222356899999999876677888999
Q ss_pred HHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHH
Q 043290 293 AIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILES 372 (430)
Q Consensus 293 ~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~ea 372 (430)
++++++.+.+++|..++.... +.+. ..++|+.+.+|+|+.++|+++++ ||+|||+||++||
T Consensus 264 ~~~l~~~~~~~~~~~g~~~~~------------~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea 324 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSLDV------------SGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGA 324 (412)
T ss_dssp HHHHHTSSSEEEEECCSSCCC------------TTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHH
T ss_pred HHHHHcCCCEEEEEECCCCCh------------hhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHH
Confidence 999999999999998765211 1111 12458999999999999999998 9999999999999
Q ss_pred HHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 373 LWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 373 l~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
+++|+|+|++|...||..|+.++++. |.|..+..+ .+++++|+++|+++|
T Consensus 325 ~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~------~~~~~~l~~ai~~ll 374 (412)
T 3otg_A 325 LGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPD------NISPDSVSGAAKRLL 374 (412)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCGG------GCCHHHHHHHHHHHH
T ss_pred HHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc------cCCHHHHHHHHHHHH
Confidence 99999999999999999999999997 999998865 689999999999987
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.5e-25 Score=189.30 Aligned_cols=147 Identities=22% Similarity=0.440 Sum_probs=126.8
Q ss_pred hhcHhHHHHHhhcCCCCcEEEEeecCCc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHH
Q 043290 255 EAQYQKIFQWLDDLAESSVVFLCFGSSG-SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFL 333 (430)
Q Consensus 255 ~~~~~~l~~~l~~~~~~~vVyvsfGS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (430)
.++++++.+|++..+++++|||+|||.. ....+.+..++++|++.+.+++|+.++... ..+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-------------~~~----- 66 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-------------DTL----- 66 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-------------TTC-----
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-------------ccC-----
Confidence 3467899999987666789999999986 456778889999999999999999875411 112
Q ss_pred HhhcCceEEEeccchhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCC
Q 043290 334 ERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGS 413 (430)
Q Consensus 334 ~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~ 413 (430)
++|+.+.+|+||.++|.|+++.+||||||+||++||+++|+|+|++|...||..||.++++. |+|+.++.+
T Consensus 67 ---~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~----- 137 (170)
T 2o6l_A 67 ---GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN----- 137 (170)
T ss_dssp ---CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT-----
T ss_pred ---CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc-----
Confidence 34899999999999997777777999999999999999999999999999999999999987 999988765
Q ss_pred cccCHhHHHHHHHHhh
Q 043290 414 DLVMACDIESAVRCLM 429 (430)
Q Consensus 414 ~~~~~~~l~~ai~~vl 429 (430)
.++.++|.++|+++|
T Consensus 138 -~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 138 -TMSSTDLLNALKRVI 152 (170)
T ss_dssp -TCCHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHH
Confidence 789999999999986
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.91 E-value=4.4e-23 Score=195.61 Aligned_cols=309 Identities=13% Similarity=0.074 Sum_probs=179.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCC--CC
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLP--DV 78 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~ 78 (430)
||+ ||++...++.||++|.++||++|.+|||+ |+|++++...+. ..++ ..++.+..++....... ..
T Consensus 1 M~~-~i~i~~GGTgGHi~palala~~L~~~g~~--V~~vg~~~g~e~---~~v~-----~~g~~~~~i~~~~~~~~~~~~ 69 (365)
T 3s2u_A 1 MKG-NVLIMAGGTGGHVFPALACAREFQARGYA--VHWLGTPRGIEN---DLVP-----KAGLPLHLIQVSGLRGKGLKS 69 (365)
T ss_dssp --C-EEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECSSSTHH---HHTG-----GGTCCEEECC-----------
T ss_pred CCC-cEEEEcCCCHHHHHHHHHHHHHHHhCCCE--EEEEECCchHhh---chhh-----hcCCcEEEEECCCcCCCCHHH
Confidence 776 79998888889999999999999999999 899987643221 1222 13466666653211110 00
Q ss_pred CCCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcch--HHHHHHhcCCceEEEecchhHHHHHHhhcccc
Q 043290 79 LKKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCVS--MVDIAKELSLPSYIFLTSNLGFLGLMLYLPTR 156 (430)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (430)
....+..++.. . .....++++. +||+||++..... +..+|+.+|||+++.-...
T Consensus 70 ~~~~~~~~~~~----~-~~~~~~l~~~------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~------------- 125 (365)
T 3s2u_A 70 LVKAPLELLKS----L-FQALRVIRQL------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA------------- 125 (365)
T ss_dssp ---CHHHHHHH----H-HHHHHHHHHH------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS-------------
T ss_pred HHHHHHHHHHH----H-HHHHHHHHhc------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch-------------
Confidence 00111111111 1 1223445554 8999999865443 4567888999977542110
Q ss_pred cccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhhccCcEEEEcccccccHHHHHHhhcCCCCCe
Q 043290 157 QDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPL 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~ 236 (430)
.||+. +.+ ..+.++.+. .++.+-.+ ...+.
T Consensus 126 ----------------~~G~~-------------------nr~-----l~~~a~~v~-~~~~~~~~---------~~~k~ 155 (365)
T 3s2u_A 126 ----------------VAGTA-------------------NRS-----LAPIARRVC-EAFPDTFP---------ASDKR 155 (365)
T ss_dssp ----------------SCCHH-------------------HHH-----HGGGCSEEE-ESSTTSSC---------C---C
T ss_pred ----------------hhhhH-------------------HHh-----hccccceee-eccccccc---------CcCcE
Confidence 01110 000 001111121 12211100 11235
Q ss_pred EEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhC----CCcEEEEEecCCC
Q 043290 237 YTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERS----GYNFLWSLRVSCP 312 (430)
Q Consensus 237 ~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~----~~~~vw~~~~~~~ 312 (430)
+++|.......... .... ..++ +.+++|+|..||.... ...+.+.++++.. +..++|..|.+..
T Consensus 156 ~~~g~pvr~~~~~~----~~~~----~~~~--~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~ 223 (365)
T 3s2u_A 156 LTTGNPVRGELFLD----AHAR----APLT--GRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHA 223 (365)
T ss_dssp EECCCCCCGGGCCC----TTSS----CCCT--TSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTH
T ss_pred EEECCCCchhhccc----hhhh----cccC--CCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcccc
Confidence 56664332211000 0000 0111 2456888888886432 2233455666543 4567777664410
Q ss_pred CCccccccccCCCCCCChhHHHhhcCceEEEeccch-hhhhccCceeEEEeccCchhHHHHHHhCCceeecccc----cc
Q 043290 313 KDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQ-VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY----AE 387 (430)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq-~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~----~D 387 (430)
+.+ .......+.++.+.+|+++ .++++.+++ +|||+|.+|+.|++++|+|+|.+|+- .+
T Consensus 224 -------------~~~-~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~ 287 (365)
T 3s2u_A 224 -------------EIT-AERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDH 287 (365)
T ss_dssp -------------HHH-HHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCH
T ss_pred -------------ccc-cceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcH
Confidence 001 1112234568889999987 579999999 99999999999999999999999873 58
Q ss_pred cchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 388 QQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 388 Q~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
|..||+.+++. |+|+.+..+ .+++++|.++|.++|
T Consensus 288 Q~~NA~~l~~~-G~a~~l~~~------~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 288 QTRNAEFLVRS-GAGRLLPQK------STGAAELAAQLSEVL 322 (365)
T ss_dssp HHHHHHHHHTT-TSEEECCTT------TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCEEEeecC------CCCHHHHHHHHHHHH
Confidence 99999999998 999988765 789999999999986
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.75 E-value=1.6e-16 Score=150.62 Aligned_cols=305 Identities=14% Similarity=0.053 Sum_probs=179.0
Q ss_pred CCC--cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCC
Q 043290 1 MKK--AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDV 78 (430)
Q Consensus 1 m~~--~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (430)
|++ +||++++.+..||..+++.|+++|+++||+ |++++....... ...+ ..++++..++......
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~--V~v~~~~~~~~~---~~~~-----~~g~~~~~~~~~~~~~--- 68 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQ--VRWLGTADRMEA---DLVP-----KHGIEIDFIRISGLRG--- 68 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCE--EEEEECTTSTHH---HHGG-----GGTCEEEECCCCCCTT---
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCE--EEEEecCCcchh---hhcc-----ccCCceEEecCCccCc---
Confidence 555 789999988889999999999999999999 889986532110 1111 1356776665321111
Q ss_pred CCCCHHHHHHHHHH--hhhhhHHHHHHHhhccCCCCceEEEEcCCc--chHHHHHHhcCCceEEEecchhHHHHHHhhcc
Q 043290 79 LKKSPEYFLSLVVE--SHLPNVKNIVSSRANSGSLQVTGLVLDFFC--VSMVDIAKELSLPSYIFLTSNLGFLGLMLYLP 154 (430)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (430)
......+..... .....+...+++. +||+|+++... ..+..+++.+|+|++.......
T Consensus 69 --~~~~~~~~~~~~~~~~~~~l~~~l~~~------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------- 130 (364)
T 1f0k_A 69 --KGIKALIAAPLRIFNAWRQARAIMKAY------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI---------- 130 (364)
T ss_dssp --CCHHHHHTCHHHHHHHHHHHHHHHHHH------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS----------
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHHHhc------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC----------
Confidence 111111111000 1112233334443 89999998643 2345677889999775432100
Q ss_pred cccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhhccCcEEEEcccccccHHHHHHhhcCCCC
Q 043290 155 TRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNP 234 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~ 234 (430)
++ ..+ + ...+..+.+++.+-. . ++
T Consensus 131 -------------------~~-------------------~~~---~--~~~~~~d~v~~~~~~-~------------~~ 154 (364)
T 1f0k_A 131 -------------------AG-------------------LTN---K--WLAKIATKVMQAFPG-A------------FP 154 (364)
T ss_dssp -------------------CC-------------------HHH---H--HHTTTCSEEEESSTT-S------------SS
T ss_pred -------------------Cc-------------------HHH---H--HHHHhCCEEEecChh-h------------cC
Confidence 00 000 0 011223444443211 1 12
Q ss_pred CeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhC--CCcEEEEEecCCC
Q 043290 235 PLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERS--GYNFLWSLRVSCP 312 (430)
Q Consensus 235 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~--~~~~vw~~~~~~~ 312 (430)
++..+|.-..... ..... ..+.+...+++++|++..|+... ......++++++.. +.++++..|.+.
T Consensus 155 ~~~~i~n~v~~~~-------~~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~- 223 (364)
T 1f0k_A 155 NAEVVGNPVRTDV-------LALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS- 223 (364)
T ss_dssp SCEECCCCCCHHH-------HTSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC-
T ss_pred CceEeCCccchhh-------cccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch-
Confidence 4555553221110 00000 11112122234567777777542 33344455666543 567677776551
Q ss_pred CCccccccccCCCCCCChhHH---Hhhc-CceEEEeccc-hhhhhccCceeEEEeccCchhHHHHHHhCCceeecccc--
Q 043290 313 KDEASAHRYVTNNGVFPEGFL---ERIK-GRGMICGWVP-QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY-- 385 (430)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~v~~~~p-q~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~-- 385 (430)
.+.+. ++.. +++.+.+|++ -..++..+++ ||+++|.+++.||+++|+|+|+.|..
T Consensus 224 ----------------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~ 285 (364)
T 1f0k_A 224 ----------------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHK 285 (364)
T ss_dssp ----------------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCT
T ss_pred ----------------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCC
Confidence 01221 1222 4789999984 5789999999 99999999999999999999999988
Q ss_pred -cccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHh
Q 043290 386 -AEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCL 428 (430)
Q Consensus 386 -~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~v 428 (430)
.||..|+..+.+. |.|..++.+ +.+.++++++|.++
T Consensus 286 ~~~q~~~~~~~~~~-g~g~~~~~~------d~~~~~la~~i~~l 322 (364)
T 1f0k_A 286 DRQQYWNALPLEKA-GAAKIIEQP------QLSVDAVANTLAGW 322 (364)
T ss_dssp TCHHHHHHHHHHHT-TSEEECCGG------GCCHHHHHHHHHTC
T ss_pred chhHHHHHHHHHhC-CcEEEeccc------cCCHHHHHHHHHhc
Confidence 7999999999987 999887754 67799999999765
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=2.8e-15 Score=129.58 Aligned_cols=145 Identities=17% Similarity=0.154 Sum_probs=92.8
Q ss_pred CCCcEEEEeecCCccCCHHHHHHH-----HHHHHhCC-CcEEEEEecCCCCCccc-ccccc--CCCCCCChhH-------
Q 043290 269 AESSVVFLCFGSSGSFDVAQVKEI-----AIGLERSG-YNFLWSLRVSCPKDEAS-AHRYV--TNNGVFPEGF------- 332 (430)
Q Consensus 269 ~~~~vVyvsfGS~~~~~~~~~~~~-----~~al~~~~-~~~vw~~~~~~~~~~~~-~~~~~--~~~~~~~~~~------- 332 (430)
+++++|||+.||.... .+.+..+ +++|.+.+ .++++.+|......... ...+. ...+-+|.+.
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 3568999999997322 3333333 48888887 79999998763200000 00000 0000011000
Q ss_pred H----HhhcCceEEEeccchh-hhhc-cCceeEEEeccCchhHHHHHHhCCceeecccc----cccchhHHHHhhhhcee
Q 043290 333 L----ERIKGRGMICGWVPQV-EILA-HKAIGGFVSHCGWNSILESLWYGVPIATWPIY----AEQQLNAFRMVKEQGLA 402 (430)
Q Consensus 333 ~----~~~~~~~~v~~~~pq~-~iL~-~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~----~DQ~~~a~rv~~~~G~G 402 (430)
. ....-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++. |++
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCE
Confidence 0 0001144455887764 8999 9999 99999999999999999999999984 3699999999997 998
Q ss_pred EEeecccccCCcccCHhHHHHHHHHh
Q 043290 403 LDLRLDYRVGSDLVMACDIESAVRCL 428 (430)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~ai~~v 428 (430)
+.+ +.++|+++|+++
T Consensus 182 ~~~-----------~~~~L~~~i~~l 196 (224)
T 2jzc_A 182 WSC-----------APTETGLIAGLR 196 (224)
T ss_dssp CEE-----------CSCTTTHHHHHH
T ss_pred EEc-----------CHHHHHHHHHHH
Confidence 644 345555555554
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.35 E-value=2.2e-10 Score=103.15 Aligned_cols=115 Identities=12% Similarity=0.133 Sum_probs=87.7
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHh--hcCceEEEeccch
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLER--IKGRGMICGWVPQ 348 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq 348 (430)
.+.|+|++|..- .......++++|.+.. ++.+..|.+.. ..+.+.+. ...|+.+..++++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~---------------~~~~l~~~~~~~~~v~v~~~~~~ 218 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP---------------NLKKLQKFAKLHNNIRLFIDHEN 218 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT---------------THHHHHHHHHTCSSEEEEESCSC
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch---------------HHHHHHHHHhhCCCEEEEeCHHH
Confidence 468999999743 2235567888887654 56666665521 11222221 1248899999986
Q ss_pred h-hhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeec
Q 043290 349 V-EILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRL 407 (430)
Q Consensus 349 ~-~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~ 407 (430)
. +++..+++ +||+|| +|+.|+++.|+|+|.+|+..+|..||..+++. |++..+..
T Consensus 219 m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 219 IAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 5 68999998 999999 89999999999999999999999999999998 99987763
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.03 E-value=1.4e-07 Score=89.55 Aligned_cols=316 Identities=13% Similarity=0.070 Sum_probs=164.1
Q ss_pred CCCcEEEEEcC--C--CCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCC
Q 043290 1 MKKAELIFVPS--P--GIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLP 76 (430)
Q Consensus 1 m~~~~i~~~~~--p--~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 76 (430)
|+++||++++. + ..|.-.-+..|++.| +||+ |++++....... ...+ ....++.+..++....-
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~--v~v~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~-- 69 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPES--IVVFASTQNAEE-AHAY-----DKTLDYEVIRWPRSVML-- 69 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGG--EEEEEECSSHHH-HHHH-----HTTCSSEEEEESSSSCC--
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCe--EEEEECCCCccc-hhhh-----ccccceEEEEccccccc--
Confidence 56788999975 3 468888999999999 7999 888886532110 0011 12345666665532110
Q ss_pred CCCCCCHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcc--hHHHHHHhcCCceEEEecchhHHHHHHhhcc
Q 043290 77 DVLKKSPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCV--SMVDIAKELSLPSYIFLTSNLGFLGLMLYLP 154 (430)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (430)
... .....+...+++. ++|+|++..... ....+++++|+|.+++....... .
T Consensus 70 ----~~~---------~~~~~l~~~~~~~------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-----~-- 123 (394)
T 3okp_A 70 ----PTP---------TTAHAMAEIIRER------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-----G-- 123 (394)
T ss_dssp ----SCH---------HHHHHHHHHHHHT------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-----H--
T ss_pred ----cch---------hhHHHHHHHHHhc------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-----h--
Confidence 011 1112333444443 899999765433 34566788999855543322110 0
Q ss_pred cccccccccccCCCcccccCCCCCCccCCCCCcccccCCCchHHHHHHHHhhccCcEEEEcccccccHHHHHHhhcCCCC
Q 043290 155 TRQDRISTVFESSDHELLIPGITSPVPVCVLPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNP 234 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~ 234 (430)
+. .....+...+ ..++..+.++..|-... ......+. ...
T Consensus 124 ---------------------------~~--------~~~~~~~~~~--~~~~~~d~ii~~s~~~~-~~~~~~~~--~~~ 163 (394)
T 3okp_A 124 ---------------------------WS--------MLPGSRQSLR--KIGTEVDVLTYISQYTL-RRFKSAFG--SHP 163 (394)
T ss_dssp ---------------------------HT--------TSHHHHHHHH--HHHHHCSEEEESCHHHH-HHHHHHHC--SSS
T ss_pred ---------------------------hh--------hcchhhHHHH--HHHHhCCEEEEcCHHHH-HHHHHhcC--CCC
Confidence 00 0001111111 12345677776653221 11122221 112
Q ss_pred CeEEeCccccCCCCCCCCCChhcHhHHHHHhhcCCCCcEEEEeecCCc-cCCHHHHHHHHHHHHh--CCCcEEEEEecCC
Q 043290 235 PLYTVGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSG-SFDVAQVKEIAIGLER--SGYNFLWSLRVSC 311 (430)
Q Consensus 235 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vVyvsfGS~~-~~~~~~~~~~~~al~~--~~~~~vw~~~~~~ 311 (430)
++..+..-.....-... .......+.+-+.- +++..+++..|+.. .-..+.+.+.++.+.+ .+.++++. |.+.
T Consensus 164 ~~~vi~ngv~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~ 239 (394)
T 3okp_A 164 TFEHLPSGVDVKRFTPA--TPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSGR 239 (394)
T ss_dssp EEEECCCCBCTTTSCCC--CHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCCT
T ss_pred CeEEecCCcCHHHcCCC--CchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCch
Confidence 35555533322211000 01222333333322 23346777788864 2233444444444433 35666654 3221
Q ss_pred CCCccccccccCCCCCCChhHH---HhhcCceEEEeccchhh---hhccCceeEEEe-----------ccCchhHHHHHH
Q 043290 312 PKDEASAHRYVTNNGVFPEGFL---ERIKGRGMICGWVPQVE---ILAHKAIGGFVS-----------HCGWNSILESLW 374 (430)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~pq~~---iL~~~~~~~~it-----------HgG~~s~~eal~ 374 (430)
..+.+. ....+++.+.+|+|+.+ ++..+++ +|. -|..+++.||++
T Consensus 240 ----------------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 240 ----------------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp ----------------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHH
T ss_pred ----------------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHH
Confidence 111111 22346899999998766 5778888 665 555678999999
Q ss_pred hCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhhC
Q 043290 375 YGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 375 ~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
+|+|+|+.+.. .....+ +. |.|..+.. -+.++++++|.++++
T Consensus 302 ~G~PvI~~~~~----~~~e~i-~~-~~g~~~~~--------~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 302 CGVPVIAGTSG----GAPETV-TP-ATGLVVEG--------SDVDKLSELLIELLD 343 (394)
T ss_dssp TTCCEEECSST----TGGGGC-CT-TTEEECCT--------TCHHHHHHHHHHHHT
T ss_pred cCCCEEEeCCC----ChHHHH-hc-CCceEeCC--------CCHHHHHHHHHHHHh
Confidence 99999997653 233332 33 56666553 378999999988763
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.95 E-value=2.9e-07 Score=88.93 Aligned_cols=78 Identities=12% Similarity=-0.012 Sum_probs=57.3
Q ss_pred cCceEEEeccchh---hhhccCceeEEEec----cCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeeccc
Q 043290 337 KGRGMICGWVPQV---EILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDY 409 (430)
Q Consensus 337 ~~~~~v~~~~pq~---~iL~~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~ 409 (430)
.+++.+.+++|+. .++..+++ +|.- |..+++.||+++|+|+|+.+. ......+.+. +.|..++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 4689999999874 67788888 6643 334689999999999999764 3444444443 56776653
Q ss_pred ccCCcccCHhHHHHHHHHhh
Q 043290 410 RVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 410 ~~~~~~~~~~~l~~ai~~vl 429 (430)
-+.++++++|.+++
T Consensus 376 ------~d~~~la~~i~~l~ 389 (438)
T 3c48_A 376 ------HSPHAWADALATLL 389 (438)
T ss_dssp ------CCHHHHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHHH
Confidence 47889999998876
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.93 E-value=1.3e-07 Score=89.37 Aligned_cols=126 Identities=14% Similarity=0.194 Sum_probs=80.2
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHh-----CCCcEEEEEecCCCCCccccccccCCCCCCChhHHHh--hcCceEEE
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLER-----SGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLER--IKGRGMIC 343 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~-----~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~ 343 (430)
+++|+++.|...... .+..++++++. .+.++++..+.+. .+-+.+.+. ..+++.+.
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~---------------~~~~~l~~~~~~~~~v~~~ 260 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP---------------VVREAVFPVLKGVRNFVLL 260 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH---------------HHHHHHHHHHTTCTTEEEE
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH---------------HHHHHHHHHhccCCCEEEE
Confidence 457777777553222 34455666543 2566666544330 000111111 12588888
Q ss_pred eccch---hhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhH
Q 043290 344 GWVPQ---VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACD 420 (430)
Q Consensus 344 ~~~pq---~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~ 420 (430)
+++++ ..+++.+++ ||+.+| |.+.||+++|+|+|+.+..+++... .+. |.|+.+. .++++
T Consensus 261 g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~---------~d~~~ 323 (376)
T 1v4v_A 261 DPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG---------TDPEG 323 (376)
T ss_dssp CCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC---------SCHHH
T ss_pred CCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC---------CCHHH
Confidence 66655 588889998 999883 4455999999999998877776653 455 8887653 27899
Q ss_pred HHHHHHHhhC
Q 043290 421 IESAVRCLMD 430 (430)
Q Consensus 421 l~~ai~~vl~ 430 (430)
|+++|.++++
T Consensus 324 la~~i~~ll~ 333 (376)
T 1v4v_A 324 VYRVVKGLLE 333 (376)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998873
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.90 E-value=2.1e-07 Score=88.13 Aligned_cols=127 Identities=14% Similarity=0.122 Sum_probs=80.9
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHHHh-----CCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhh--cCceEE
Q 043290 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLER-----SGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERI--KGRGMI 342 (430)
Q Consensus 270 ~~~vVyvsfGS~~~~~~~~~~~~~~al~~-----~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v 342 (430)
++++++++.|....... .+..++++++. .+.++++..+.+. .+.+.+.+.. .+++.+
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~---------------~~~~~l~~~~~~~~~v~~ 267 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP---------------NVREPVNRILGHVKNVIL 267 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH---------------HHHHHHHHHHTTCTTEEE
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH---------------HHHHHHHHHhhcCCCEEE
Confidence 34678888887654323 34445555543 2556666433220 0001111111 258888
Q ss_pred Eeccch---hhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHh
Q 043290 343 CGWVPQ---VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMAC 419 (430)
Q Consensus 343 ~~~~pq---~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~ 419 (430)
.+++++ ..++..+++ ||+.+| +.+.||+++|+|+|+.+..++... +.+. |.|+.++ . +++
T Consensus 268 ~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~--------~-d~~ 330 (384)
T 1vgv_A 268 IDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVG--------T-DKQ 330 (384)
T ss_dssp ECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEEC--------S-SHH
T ss_pred eCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeC--------C-CHH
Confidence 777664 567889998 999885 348899999999999987554332 3455 8887664 3 789
Q ss_pred HHHHHHHHhh
Q 043290 420 DIESAVRCLM 429 (430)
Q Consensus 420 ~l~~ai~~vl 429 (430)
+|+++|.+++
T Consensus 331 ~la~~i~~ll 340 (384)
T 1vgv_A 331 RIVEEVTRLL 340 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998876
No 29
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.88 E-value=2.9e-08 Score=92.70 Aligned_cols=125 Identities=14% Similarity=0.048 Sum_probs=80.1
Q ss_pred EEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchh---h
Q 043290 274 VFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQV---E 350 (430)
Q Consensus 274 VyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~---~ 350 (430)
+++..|+.. ....+..++++++..+.++++. |.+.. ...+ ..+.+..++++.+.+|+|+. .
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~~------------~~~l-~~~~~~~~~~v~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAWE------------PEYF-DEITRRYGSTVEPIGEVGGERRLD 227 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCCC------------HHHH-HHHHHHHTTTEEECCCCCHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCccc------------HHHH-HHHHHHhCCCEEEeccCCHHHHHH
Confidence 444567754 2344566777777777776665 33210 0001 12233334799999999976 7
Q ss_pred hhccCceeEEE--ec-----------cC-chhHHHHHHhCCceeecccccccchhHHHHhh--hhceeEEeecccccCCc
Q 043290 351 ILAHKAIGGFV--SH-----------CG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVK--EQGLALDLRLDYRVGSD 414 (430)
Q Consensus 351 iL~~~~~~~~i--tH-----------gG-~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~--~~G~G~~~~~~~~~~~~ 414 (430)
++..+++ +| +. -| -+++.||+++|+|+|+.... .....+.+ . +.|..++
T Consensus 228 ~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~~-------- 292 (342)
T 2iuy_A 228 LLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGTD-------- 292 (342)
T ss_dssp HHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSSC--------
T ss_pred HHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEcC--------
Confidence 8889998 55 22 23 45799999999999998763 34444444 3 4554333
Q ss_pred ccCHhHHHHHHHHhhC
Q 043290 415 LVMACDIESAVRCLMD 430 (430)
Q Consensus 415 ~~~~~~l~~ai~~vl~ 430 (430)
. +.++++++|.++++
T Consensus 293 ~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 F-APDEARRTLAGLPA 307 (342)
T ss_dssp C-CHHHHHHHHHTSCC
T ss_pred C-CHHHHHHHHHHHHH
Confidence 5 88999999988763
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.86 E-value=3.6e-07 Score=88.04 Aligned_cols=129 Identities=11% Similarity=0.035 Sum_probs=76.9
Q ss_pred EEEEeecCCc--cCCHHHHHHHHHHHHh----CCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEecc
Q 043290 273 VVFLCFGSSG--SFDVAQVKEIAIGLER----SGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWV 346 (430)
Q Consensus 273 vVyvsfGS~~--~~~~~~~~~~~~al~~----~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 346 (430)
.+++..|+.. .-..+.+.+.+..+.+ .+.++++. |.+... + ...+ ..+.++.++++.+.+|+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~~~-------~---~~~l-~~~~~~~~~~~~~~g~~ 319 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGDPE-------L---EGWA-RSLEEKHGNVKVITEML 319 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCCHH-------H---HHHH-HHHHHHCTTEEEECSCC
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCChh-------H---HHHH-HHHHhhcCCEEEEcCCC
Confidence 7777888876 2344555555555554 34455443 332100 0 0000 11222333455567999
Q ss_pred chhh---hhccCceeEEEe----ccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHh
Q 043290 347 PQVE---ILAHKAIGGFVS----HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMAC 419 (430)
Q Consensus 347 pq~~---iL~~~~~~~~it----HgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~ 419 (430)
|+.+ ++..+++ +|. -|--+++.||+++|+|+|+... ...... .+. |.|..++. -+.+
T Consensus 320 ~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~-~~~-~~g~~~~~--------~d~~ 383 (439)
T 3fro_A 320 SREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDI-ITN-ETGILVKA--------GDPG 383 (439)
T ss_dssp CHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHH-CCT-TTCEEECT--------TCHH
T ss_pred CHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCccee-EEc-CceEEeCC--------CCHH
Confidence 9865 5778888 552 2334689999999999999754 334433 333 67776663 4789
Q ss_pred HHHHHHHHhh
Q 043290 420 DIESAVRCLM 429 (430)
Q Consensus 420 ~l~~ai~~vl 429 (430)
+++++|.+++
T Consensus 384 ~la~~i~~ll 393 (439)
T 3fro_A 384 ELANAILKAL 393 (439)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998876
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.86 E-value=6.6e-08 Score=92.30 Aligned_cols=75 Identities=13% Similarity=0.049 Sum_probs=56.2
Q ss_pred CceEEEeccch---hhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCc
Q 043290 338 GRGMICGWVPQ---VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSD 414 (430)
Q Consensus 338 ~~~~v~~~~pq---~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~ 414 (430)
+++.+.+++++ ..+++++++ +|+-.|. .+.||.++|+|+|+.|-.++++. +.+. |.|+.+.
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-------- 345 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-------- 345 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC--------
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC--------
Confidence 58899988864 467778887 8988742 23699999999999976676654 2455 8776554
Q ss_pred ccCHhHHHHHHHHhh
Q 043290 415 LVMACDIESAVRCLM 429 (430)
Q Consensus 415 ~~~~~~l~~ai~~vl 429 (430)
.++++|.++|.++|
T Consensus 346 -~d~~~l~~ai~~ll 359 (403)
T 3ot5_A 346 -TNKENLIKEALDLL 359 (403)
T ss_dssp -SCHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHH
Confidence 27889999998876
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.86 E-value=3.8e-07 Score=86.87 Aligned_cols=127 Identities=14% Similarity=0.094 Sum_probs=78.5
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHHHh-----CCCcEEEEEecCCCCCccccccccCCCCCCChhHHHh--hcCceEE
Q 043290 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLER-----SGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLER--IKGRGMI 342 (430)
Q Consensus 270 ~~~vVyvsfGS~~~~~~~~~~~~~~al~~-----~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v 342 (430)
++++|+++.+-..+... .+..++++++. .+.++|+..+.+. .+-+.+.+. ..+++.+
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~---------------~~~~~l~~~~~~~~~v~~ 292 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP---------------NVREPVNKLLKGVSNIVL 292 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH---------------HHHHHHHHHTTTCTTEEE
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh---------------HHHHHHHHHHcCCCCEEE
Confidence 35677776532222222 24566666654 3567777654330 000111111 2357888
Q ss_pred Eeccc---hhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHh
Q 043290 343 CGWVP---QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMAC 419 (430)
Q Consensus 343 ~~~~p---q~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~ 419 (430)
.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+..-.++++. +.+. |.++.+. .+++
T Consensus 293 ~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~---------~d~~ 355 (396)
T 3dzc_A 293 IEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVG---------TNQQ 355 (396)
T ss_dssp ECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECT---------TCHH
T ss_pred eCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcC---------CCHH
Confidence 77764 4577888888 999987 666799999999999865555532 3455 8775443 2689
Q ss_pred HHHHHHHHhh
Q 043290 420 DIESAVRCLM 429 (430)
Q Consensus 420 ~l~~ai~~vl 429 (430)
+|.++|.+++
T Consensus 356 ~l~~ai~~ll 365 (396)
T 3dzc_A 356 QICDALSLLL 365 (396)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998876
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.71 E-value=9.1e-07 Score=83.44 Aligned_cols=75 Identities=17% Similarity=0.106 Sum_probs=55.7
Q ss_pred CceEEEeccch---hhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCc
Q 043290 338 GRGMICGWVPQ---VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSD 414 (430)
Q Consensus 338 ~~~~v~~~~pq---~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~ 414 (430)
+++.+.+++++ ..++..+++ ||+..| +.+.||+++|+|+|+....+..+ .+.+. |.|..++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~-------- 326 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAG-------- 326 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECC--------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcC--------
Confidence 58999777765 467888888 888873 45889999999999985434332 23455 7787654
Q ss_pred ccCHhHHHHHHHHhh
Q 043290 415 LVMACDIESAVRCLM 429 (430)
Q Consensus 415 ~~~~~~l~~ai~~vl 429 (430)
. +.++++++|.+++
T Consensus 327 ~-d~~~la~~i~~ll 340 (375)
T 3beo_A 327 T-DEETIFSLADELL 340 (375)
T ss_dssp S-CHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHH
Confidence 3 7889999998876
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.62 E-value=4.5e-06 Score=82.04 Aligned_cols=79 Identities=14% Similarity=-0.013 Sum_probs=56.0
Q ss_pred cCceEEEeccchhh---hhccC----ceeEEEec----cCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEe
Q 043290 337 KGRGMICGWVPQVE---ILAHK----AIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDL 405 (430)
Q Consensus 337 ~~~~~v~~~~pq~~---iL~~~----~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~ 405 (430)
.+++.+.+++|+.+ ++..+ ++ ||.- |--++++||+++|+|+|+... ......+.+. ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 46899999998764 56777 77 6632 334589999999999999864 2344444443 467766
Q ss_pred ecccccCCcccCHhHHHHHHHHhhC
Q 043290 406 RLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
+. -+.++++++|.++++
T Consensus 407 ~~--------~d~~~la~~i~~ll~ 423 (499)
T 2r60_A 407 DP--------EDPEDIARGLLKAFE 423 (499)
T ss_dssp CT--------TCHHHHHHHHHHHHS
T ss_pred CC--------CCHHHHHHHHHHHHh
Confidence 53 478899999988763
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.59 E-value=8.5e-06 Score=77.54 Aligned_cols=78 Identities=9% Similarity=0.106 Sum_probs=58.2
Q ss_pred cCceEEEeccchh---hhhccCceeEEEe----ccCch-hHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecc
Q 043290 337 KGRGMICGWVPQV---EILAHKAIGGFVS----HCGWN-SILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLD 408 (430)
Q Consensus 337 ~~~~~v~~~~pq~---~iL~~~~~~~~it----HgG~~-s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~ 408 (430)
.+++.+.+++|+. .++..+++ +|. +.|++ ++.||+++|+|+|+.+. ......+.+. +.|..++.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 4689999999974 88889998 553 34444 89999999999999866 3445555544 66776653
Q ss_pred cccCCcccCHhHHHHHHHHhh
Q 043290 409 YRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 409 ~~~~~~~~~~~~l~~ai~~vl 429 (430)
-+.++++++|.+++
T Consensus 334 -------~d~~~l~~~i~~l~ 347 (406)
T 2gek_A 334 -------DDADGMAAALIGIL 347 (406)
T ss_dssp -------TCHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHH
Confidence 37889999998876
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.52 E-value=5e-05 Score=71.97 Aligned_cols=77 Identities=14% Similarity=0.050 Sum_probs=54.8
Q ss_pred CceEEEeccc-hhhhhccCceeEEE----eccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccC
Q 043290 338 GRGMICGWVP-QVEILAHKAIGGFV----SHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVG 412 (430)
Q Consensus 338 ~~~~v~~~~p-q~~iL~~~~~~~~i----tHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~ 412 (430)
+++.+.++.. -..++..+++ +| .-|..+++.||+++|+|+|+.+.. .....+.+. +.|..++.
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~~~----- 334 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLCEV----- 334 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEECT-----
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEeCC-----
Confidence 5777777644 3578888998 77 456667999999999999997753 233333333 56766653
Q ss_pred CcccCHhHHHHHHHHhh
Q 043290 413 SDLVMACDIESAVRCLM 429 (430)
Q Consensus 413 ~~~~~~~~l~~ai~~vl 429 (430)
-+.++++++|.+++
T Consensus 335 ---~d~~~la~~i~~l~ 348 (394)
T 2jjm_A 335 ---GDTTGVADQAIQLL 348 (394)
T ss_dssp ---TCHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHH
Confidence 37889999988875
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.37 E-value=2.4e-05 Score=73.85 Aligned_cols=131 Identities=15% Similarity=0.132 Sum_probs=81.1
Q ss_pred CcEEEEeecCCccCCH-HHHHHHHHHHHhC----CCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEec
Q 043290 271 SSVVFLCFGSSGSFDV-AQVKEIAIGLERS----GYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGW 345 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~-~~~~~~~~al~~~----~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 345 (430)
++.|+++.|...+.+. +.+..+++++++. +..+|+....... +..+. . .++. ...+|+++.+.
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~---------~~l~~-~-~~~~-~~~~~v~l~~~ 270 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTK---------KRLED-L-EGFK-ELGDKIRFLPA 270 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHH---------HHHHT-S-GGGG-GTGGGEEECCC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHH---------HHHHH-H-HHHh-cCCCCEEEEcC
Confidence 5688888887654432 4566777777653 6788886542200 00000 0 0000 01247888665
Q ss_pred cc---hhhhhccCceeEEEeccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHH
Q 043290 346 VP---QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIE 422 (430)
Q Consensus 346 ~p---q~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~ 422 (430)
++ ...+++++++ +||-.|. .+.||.+.|+|+|+++...+.+. ..+. |.++.+. .++++|.
T Consensus 271 lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~---------~d~~~i~ 333 (385)
T 4hwg_A 271 FSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG---------FKAERVL 333 (385)
T ss_dssp CCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC---------SSHHHHH
T ss_pred CCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC---------CCHHHHH
Confidence 54 4578889998 9998875 46899999999999987554222 2455 8776543 3788999
Q ss_pred HHHHHhhC
Q 043290 423 SAVRCLMD 430 (430)
Q Consensus 423 ~ai~~vl~ 430 (430)
++|.++|+
T Consensus 334 ~ai~~ll~ 341 (385)
T 4hwg_A 334 QAVKTITE 341 (385)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988873
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.35 E-value=0.00041 Score=66.13 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=53.2
Q ss_pred cCceEEEeccc---h---hhhhccCceeEEEecc----CchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEee
Q 043290 337 KGRGMICGWVP---Q---VEILAHKAIGGFVSHC----GWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLR 406 (430)
Q Consensus 337 ~~~~~v~~~~p---q---~~iL~~~~~~~~itHg----G~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~ 406 (430)
.+++.+.+|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+.+. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46899999876 3 456788888 66543 45689999999999999775 2344444443 5666443
Q ss_pred cccccCCcccCHhHHHHHHHHhh
Q 043290 407 LDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 407 ~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
+.++++++|.+++
T Consensus 365 ----------d~~~la~~i~~ll 377 (416)
T 2x6q_A 365 ----------DANEAVEVVLYLL 377 (416)
T ss_dssp ----------SHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHH
Confidence 5678888887765
No 39
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.34 E-value=0.00016 Score=67.81 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=81.5
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHhCC------CcEEEEEecCCCCCccccccccCCCCCCChhHHHhh--cCceEE
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERSG------YNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERI--KGRGMI 342 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~~~------~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v 342 (430)
++.+++..|+... ...+..++++++... .++++ +|.+. ...+ ..+.+.. .+++.+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i-~G~g~-------------~~~~-~~~~~~~~~~~~v~~ 257 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFV-VGQDK-------------PRKF-EALAEKLGVRSNVHF 257 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEE-ESSSC-------------CHHH-HHHHHHHTCGGGEEE
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEE-EcCCC-------------HHHH-HHHHHHcCCCCcEEE
Confidence 3467777887542 234556677776643 34333 44331 0011 1111121 368888
Q ss_pred Eeccc-hhhhhccCceeEEEe----ccCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccC
Q 043290 343 CGWVP-QVEILAHKAIGGFVS----HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVM 417 (430)
Q Consensus 343 ~~~~p-q~~iL~~~~~~~~it----HgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~ 417 (430)
.++.. -..++..+++ +|. -|..+++.||+++|+|+|+... ..+...+.+. +.|..+.. .-+
T Consensus 258 ~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~-------~~~ 323 (374)
T 2iw1_A 258 FSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE-------PFS 323 (374)
T ss_dssp ESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS-------SCC
T ss_pred CCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC-------CCC
Confidence 88754 3678888998 665 4667789999999999999765 3455666665 78887752 247
Q ss_pred HhHHHHHHHHhh
Q 043290 418 ACDIESAVRCLM 429 (430)
Q Consensus 418 ~~~l~~ai~~vl 429 (430)
.++++++|.+++
T Consensus 324 ~~~l~~~i~~l~ 335 (374)
T 2iw1_A 324 QEQLNEVLRKAL 335 (374)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999998876
No 40
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.11 E-value=1.8e-05 Score=65.95 Aligned_cols=125 Identities=8% Similarity=-0.012 Sum_probs=80.8
Q ss_pred EEEEeecCCccCCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCChhHHH----hhcCceEEEeccc
Q 043290 273 VVFLCFGSSGSFDVAQVKEIAIGLERS-GYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLE----RIKGRGMICGWVP 347 (430)
Q Consensus 273 vVyvsfGS~~~~~~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~p 347 (430)
.+++..|+.. ....+..++++++.. +.++++.-.+.. ...+. .+.+ ..++|+.+.+|+|
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~-------------~~~l~-~~~~~~~~~l~~~v~~~g~~~ 87 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK-------------GDHAE-RYARKIMKIAPDNVKFLGSVS 87 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT-------------TSTHH-HHHHHHHHHSCTTEEEEESCC
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc-------------HHHHH-HHHHhhhcccCCcEEEeCCCC
Confidence 4556678764 233456677777775 566666532221 01111 1111 2346899999999
Q ss_pred h---hhhhccCceeEEEe---ccCc-hhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhH
Q 043290 348 Q---VEILAHKAIGGFVS---HCGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACD 420 (430)
Q Consensus 348 q---~~iL~~~~~~~~it---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~ 420 (430)
+ ..++..+++ +|. +.|+ .++.||+++|+|+|+... ..+...+.+. +.|..+ .+ +.++
T Consensus 88 ~~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~~--------d~~~ 151 (177)
T 2f9f_A 88 EEELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-NA--------DVNE 151 (177)
T ss_dssp HHHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-CS--------CHHH
T ss_pred HHHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-CC--------CHHH
Confidence 8 678888998 665 3344 499999999999999764 3444444443 567766 33 7889
Q ss_pred HHHHHHHhh
Q 043290 421 IESAVRCLM 429 (430)
Q Consensus 421 l~~ai~~vl 429 (430)
++++|.+++
T Consensus 152 l~~~i~~l~ 160 (177)
T 2f9f_A 152 IIDAMKKVS 160 (177)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998876
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.05 E-value=9.4e-05 Score=76.15 Aligned_cols=78 Identities=14% Similarity=0.069 Sum_probs=52.7
Q ss_pred cCceEEEe----ccchhhhhc----cCceeEEEec----cCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEE
Q 043290 337 KGRGMICG----WVPQVEILA----HKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALD 404 (430)
Q Consensus 337 ~~~~~v~~----~~pq~~iL~----~~~~~~~itH----gG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~ 404 (430)
.+++.+.+ ++|+.++.. .+++ ||.= |--.++.||+++|+|+|+.. -......+.+. +.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccC-CcEEE
Confidence 36888887 555566655 3456 6632 33468999999999999964 44445444444 56777
Q ss_pred eecccccCCcccCHhHHHHHHHHhh
Q 043290 405 LRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
++. -+.++++++|.+++
T Consensus 712 v~p--------~D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 IDP--------YHGDQAADTLADFF 728 (816)
T ss_dssp ECT--------TSHHHHHHHHHHHH
T ss_pred eCC--------CCHHHHHHHHHHHH
Confidence 663 47888888887654
No 42
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.71 E-value=0.012 Score=55.93 Aligned_cols=72 Identities=11% Similarity=0.066 Sum_probs=53.4
Q ss_pred cCceEEEeccchhh---hhccCceeEEEe---ccCc-hhHHHHH-------HhCCceeecccccccchhHHHHhhhhcee
Q 043290 337 KGRGMICGWVPQVE---ILAHKAIGGFVS---HCGW-NSILESL-------WYGVPIATWPIYAEQQLNAFRMVKEQGLA 402 (430)
Q Consensus 337 ~~~~~v~~~~pq~~---iL~~~~~~~~it---HgG~-~s~~eal-------~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G 402 (430)
.+|+.+.+++|+.+ ++..+++ ||. +-|+ +++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 35899999999764 5778888 553 3344 5688999 99999999865 4443 457
Q ss_pred EE-eecccccCCcccCHhHHHHHHHHhh
Q 043290 403 LD-LRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 403 ~~-~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
.. +.. -+.++++++|.+++
T Consensus 331 ~l~v~~--------~d~~~la~ai~~ll 350 (406)
T 2hy7_A 331 RFGYTP--------GNADSVIAAITQAL 350 (406)
T ss_dssp EEEECT--------TCHHHHHHHHHHHH
T ss_pred EEEeCC--------CCHHHHHHHHHHHH
Confidence 65 553 37899999998876
No 43
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.22 E-value=0.001 Score=68.01 Aligned_cols=101 Identities=21% Similarity=0.312 Sum_probs=74.9
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHH--hhcCceEEEeccc
Q 043290 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLE--RIKGRGMICGWVP 347 (430)
Q Consensus 270 ~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~p 347 (430)
.+.+||.||-+..-.+++.+..-++-|++.+--++|-.+.... ....+-..+.+ ..++++.+.+..|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-----------~~~~l~~~~~~~gi~~~r~~f~~~~~ 589 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEPNIQQYAQNMGLPQNRIIFSPVAP 589 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-----------GHHHHHHHHHHTTCCGGGEEEEECCC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-----------HHHHHHHHHHhcCCCcCeEEECCCCC
Confidence 3469999999999999999999999999999999998875411 00111111111 1245788888888
Q ss_pred hhhhh---ccCceeEEEe---ccCchhHHHHHHhCCceeecc
Q 043290 348 QVEIL---AHKAIGGFVS---HCGWNSILESLWYGVPIATWP 383 (430)
Q Consensus 348 q~~iL---~~~~~~~~it---HgG~~s~~eal~~GvP~v~~P 383 (430)
+.+-| ...++ ++- .+|.+|+.|||+.|||+|.++
T Consensus 590 ~~~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 590 KEEHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp HHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 66555 45665 765 889999999999999999999
No 44
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.90 E-value=0.0088 Score=50.24 Aligned_cols=75 Identities=7% Similarity=-0.036 Sum_probs=54.0
Q ss_pred ceEE-Eeccchh---hhhccCceeEEEecc---C-chhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccc
Q 043290 339 RGMI-CGWVPQV---EILAHKAIGGFVSHC---G-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYR 410 (430)
Q Consensus 339 ~~~v-~~~~pq~---~iL~~~~~~~~itHg---G-~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~ 410 (430)
++.+ .+++|+. .++..+++ +|.-. | ..++.||+++|+|+|+.... .....+ +. +.|..+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC---
Confidence 8899 8999864 66778888 55322 3 46889999999999987643 344444 33 66766653
Q ss_pred cCCcccCHhHHHHHHHHhh
Q 043290 411 VGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 411 ~~~~~~~~~~l~~ai~~vl 429 (430)
-+.++++++|.+++
T Consensus 165 -----~~~~~l~~~i~~l~ 178 (200)
T 2bfw_A 165 -----GDPGELANAILKAL 178 (200)
T ss_dssp -----TCHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHH
Confidence 37889999998875
No 45
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.87 E-value=0.006 Score=60.14 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=70.8
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEE--ecCCCCCccccccccCCCCCCChhHH-HhhcCceEEEeccc
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL--RVSCPKDEASAHRYVTNNGVFPEGFL-ERIKGRGMICGWVP 347 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~p 347 (430)
+.++|.||++..-..++.+...++-+++.+..++|.. +.. .+ ....+-..+. ....+++.+.+.+|
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~--~g---------~~~~~~~~~~~~GI~~Rv~F~g~~p 508 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS--NG---------ITHPYVERFIKSYLGDSATAHPHSP 508 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC--CG---------GGHHHHHHHHHHHHGGGEEEECCCC
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC--ch---------hhHHHHHHHHHcCCCccEEEcCCCC
Confidence 3699999999888899999999999988888888753 321 00 0000001111 12346888889999
Q ss_pred hhhhh---ccCceeEEE---eccCchhHHHHHHhCCceeeccc
Q 043290 348 QVEIL---AHKAIGGFV---SHCGWNSILESLWYGVPIATWPI 384 (430)
Q Consensus 348 q~~iL---~~~~~~~~i---tHgG~~s~~eal~~GvP~v~~P~ 384 (430)
+.+.| ..+++ |+ ..+|..|+.|||++|||+|+++-
T Consensus 509 ~~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G 549 (631)
T 3q3e_A 509 YHQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTG 549 (631)
T ss_dssp HHHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccC
Confidence 77655 77777 54 23788999999999999999873
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.73 E-value=0.0088 Score=48.55 Aligned_cols=76 Identities=17% Similarity=0.190 Sum_probs=48.3
Q ss_pred cCceEEEeccchh---hhhccCceeEEEe----ccCchhHHHHHHhCC-ceeecccccccchhHHHHhhhhceeEEeecc
Q 043290 337 KGRGMICGWVPQV---EILAHKAIGGFVS----HCGWNSILESLWYGV-PIATWPIYAEQQLNAFRMVKEQGLALDLRLD 408 (430)
Q Consensus 337 ~~~~~v~~~~pq~---~iL~~~~~~~~it----HgG~~s~~eal~~Gv-P~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~ 408 (430)
+.++.+ +|+|+. .++..+++ +|. -|...++.||+++|+ |+|+....+ .....+.+. +. .+.
T Consensus 55 ~~~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~-- 123 (166)
T 3qhp_A 55 GVKAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFE-- 123 (166)
T ss_dssp TCEEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC--
T ss_pred CCeEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc--
Confidence 346777 999875 45778887 664 244469999999996 999933221 122122222 32 233
Q ss_pred cccCCcccCHhHHHHHHHHhh
Q 043290 409 YRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 409 ~~~~~~~~~~~~l~~ai~~vl 429 (430)
.-+.++++++|.+++
T Consensus 124 ------~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 124 ------PNNAKDLSAKIDWWL 138 (166)
T ss_dssp ------TTCHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHH
Confidence 347899999998875
No 47
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.60 E-value=0.4 Score=44.14 Aligned_cols=96 Identities=13% Similarity=0.212 Sum_probs=59.4
Q ss_pred CCcEEEEeecCCc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEE-Eec
Q 043290 270 ESSVVFLCFGSSG---SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMI-CGW 345 (430)
Q Consensus 270 ~~~vVyvsfGS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~ 345 (430)
+++.|.+.-||.. ..+.+.+.++++.|.+.|.++++ +++... ..+-..+.+..+.++.. .+-
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~e-------------~~~~~~i~~~~~~~~~~l~g~ 249 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPMD-------------LEMVQPVVEQMETKPIVATGK 249 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTTT-------------HHHHHHHHHTCSSCCEECTTC
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcch-------------HHHHHHHHHhcccccEEeeCC
Confidence 4578888888753 66788899999998777888877 443210 00111122222223222 222
Q ss_pred cc---hhhhhccCceeEEEeccCchhHHHHHHhCCceeec
Q 043290 346 VP---QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (430)
Q Consensus 346 ~p---q~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 382 (430)
.+ -.+++.++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 250 ~sl~e~~ali~~a~~--~i~~D-sG~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 250 FQLGPLAAAMNRCNL--LITND-SGPMHVGISQGVPIVAL 286 (349)
T ss_dssp CCHHHHHHHHHTCSE--EEEES-SHHHHHHHTTTCCEEEE
T ss_pred CCHHHHHHHHHhCCE--EEECC-CCHHHHHHhcCCCEEEE
Confidence 22 4567889998 99982 34455578899999995
No 48
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=96.53 E-value=0.019 Score=56.87 Aligned_cols=80 Identities=16% Similarity=0.121 Sum_probs=50.7
Q ss_pred CceEEEeccchh---hhhccCceeEEE---eccCchhHHHHHHhCCceeecccccccchh-HHHHhhhhceeEEeecccc
Q 043290 338 GRGMICGWVPQV---EILAHKAIGGFV---SHCGWNSILESLWYGVPIATWPIYAEQQLN-AFRMVKEQGLALDLRLDYR 410 (430)
Q Consensus 338 ~~~~v~~~~pq~---~iL~~~~~~~~i---tHgG~~s~~eal~~GvP~v~~P~~~DQ~~~-a~rv~~~~G~G~~~~~~~~ 410 (430)
+++.+.+++|+. .++..+++ || ..|+.++++||+++|+|+|++|-..=.... +..+.+. |+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhc----
Confidence 689999999865 45788888 66 236677899999999999997632111111 1222232 4443221
Q ss_pred cCCcccCHhHHHHHHHHhh
Q 043290 411 VGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 411 ~~~~~~~~~~l~~ai~~vl 429 (430)
-+.++++++|.+++
T Consensus 507 -----~~~~~la~~i~~l~ 520 (568)
T 2vsy_A 507 -----ADDAAFVAKAVALA 520 (568)
T ss_dssp -----SSHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHh
Confidence 16677777776664
No 49
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=95.53 E-value=0.12 Score=48.77 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=32.0
Q ss_pred eEEEeccchhh---hhccCceeEEEe----ccCchhHHHHHHhCCceeeccc
Q 043290 340 GMICGWVPQVE---ILAHKAIGGFVS----HCGWNSILESLWYGVPIATWPI 384 (430)
Q Consensus 340 ~~v~~~~pq~~---iL~~~~~~~~it----HgG~~s~~eal~~GvP~v~~P~ 384 (430)
+.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+...
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~ 305 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV 305 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC
Confidence 55669999554 5778887 553 2334589999999999999664
No 50
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=95.15 E-value=0.35 Score=46.61 Aligned_cols=130 Identities=14% Similarity=0.042 Sum_probs=74.6
Q ss_pred cEEEEeecCCc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceE-EEeccchh
Q 043290 272 SVVFLCFGSSG-SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGM-ICGWVPQV 349 (430)
Q Consensus 272 ~vVyvsfGS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~pq~ 349 (430)
..+++..|... .-..+.+.+.+..+.+.+.++++. |.+... ....+ ..+.++.++++. +.++ +++
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~----------~~~~l-~~~~~~~~~~v~~~~g~-~~~ 357 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGDVA----------LEGAL-LAAASRHHGRVGVAIGY-NEP 357 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBCHH----------HHHHH-HHHHHHTTTTEEEEESC-CHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCchH----------HHHHH-HHHHHhCCCcEEEecCC-CHH
Confidence 34677788865 223344444444444446776665 332000 00001 112223346787 5677 543
Q ss_pred ---hhhccCceeEEEe----ccCchhHHHHHHhCCceeecccccccchhHHHHhhhh---------ceeEEeecccccCC
Q 043290 350 ---EILAHKAIGGFVS----HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQ---------GLALDLRLDYRVGS 413 (430)
Q Consensus 350 ---~iL~~~~~~~~it----HgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~---------G~G~~~~~~~~~~~ 413 (430)
.++..+++ ||. -|--++++||+++|+|+|+.... .....+. .- +.|..++
T Consensus 358 ~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~-~~~~~~~~~~~~~G~l~~------- 423 (485)
T 1rzu_A 358 LSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVI-DANHAALASKAATGVQFS------- 423 (485)
T ss_dssp HHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCC-BCCHHHHHTTCCCBEEES-------
T ss_pred HHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheec-ccccccccccCCcceEeC-------
Confidence 57888998 663 23356899999999999997652 2333322 21 3566655
Q ss_pred cccCHhHHHHHHHHhh
Q 043290 414 DLVMACDIESAVRCLM 429 (430)
Q Consensus 414 ~~~~~~~l~~ai~~vl 429 (430)
.-+.++++++|.+++
T Consensus 424 -~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 424 -PVTLDGLKQAIRRTV 438 (485)
T ss_dssp -SCSHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHH
Confidence 347899999998876
No 51
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.11 E-value=1.9 Score=39.26 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=59.7
Q ss_pred CCcEEEEeecC-C-c--cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhc----CceE
Q 043290 270 ESSVVFLCFGS-S-G--SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIK----GRGM 341 (430)
Q Consensus 270 ~~~vVyvsfGS-~-~--~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 341 (430)
+++.|.+.-|| . . ..+.+.+.++++.|.+.+.++++. +.... ..+-..+.+..+ .++.
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e-------------~~~~~~i~~~~~~~~~~~~~ 244 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKD-------------HEAGNEILAALNTEQQAWCR 244 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGG-------------HHHHHHHHTTSCHHHHTTEE
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhh-------------HHHHHHHHHhhhhccccceE
Confidence 45688888888 3 2 667888999999998778888774 33200 000011111111 1332
Q ss_pred E-Eecc---chhhhhccCceeEEEeccCchhHHHHHHhCCceeec
Q 043290 342 I-CGWV---PQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (430)
Q Consensus 342 v-~~~~---pq~~iL~~~~~~~~itHgG~~s~~eal~~GvP~v~~ 382 (430)
. .+.. --.+++.++++ +|+.- .|.++-|.+.|+|+|++
T Consensus 245 ~l~g~~sl~e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 245 NLAGETQLDQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp ECTTTSCHHHHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred eccCcCCHHHHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2 2322 23678899998 99973 45677788899999985
No 52
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=95.10 E-value=0.027 Score=52.71 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=54.6
Q ss_pred ceEEEecc-chhhhhccCceeEEEec-----cCchhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccC
Q 043290 339 RGMICGWV-PQVEILAHKAIGGFVSH-----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVG 412 (430)
Q Consensus 339 ~~~v~~~~-pq~~iL~~~~~~~~itH-----gG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~ 412 (430)
++++.++. .-..+++.+++ |+.- +|..+++||+++|+|+|+-|..++.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 45555543 24567777777 5541 24478999999999999877777766666555555 7776432
Q ss_pred CcccCHhHHHHHHHHhh
Q 043290 413 SDLVMACDIESAVRCLM 429 (430)
Q Consensus 413 ~~~~~~~~l~~ai~~vl 429 (430)
+.++++++|.++|
T Consensus 332 ----d~~~La~ai~~ll 344 (374)
T 2xci_A 332 ----NETELVTKLTELL 344 (374)
T ss_dssp ----SHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHH
Confidence 6789999998886
No 53
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=95.03 E-value=0.1 Score=50.47 Aligned_cols=131 Identities=14% Similarity=-0.018 Sum_probs=73.4
Q ss_pred cEEEEeecCCc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceE-EEeccchh
Q 043290 272 SVVFLCFGSSG-SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGM-ICGWVPQV 349 (430)
Q Consensus 272 ~vVyvsfGS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~pq~ 349 (430)
..+++..|... .-..+.+.+.+..+.+.+.+++++-.+.. . ....+ ..+.++..+++. +.++ +++
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~-~----------~~~~l-~~~~~~~~~~v~~~~g~-~~~ 358 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP-V----------LQEGF-LAAAAEYPGQVGVQIGY-HEA 358 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECH-H----------HHHHH-HHHHHHSTTTEEEEESC-CHH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCch-H----------HHHHH-HHHHHhCCCcEEEeCCC-CHH
Confidence 45666677754 22333344444444444677666533210 0 00001 112222346776 6677 543
Q ss_pred ---hhhccCceeEEEe----ccCchhHHHHHHhCCceeecccccccchhHHHHhhh--------hceeEEeecccccCCc
Q 043290 350 ---EILAHKAIGGFVS----HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKE--------QGLALDLRLDYRVGSD 414 (430)
Q Consensus 350 ---~iL~~~~~~~~it----HgG~~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~--------~G~G~~~~~~~~~~~~ 414 (430)
.++..+++ ||. -|--++++||+++|+|+|+.... .....+.+. -+.|..++.
T Consensus 359 ~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~------- 425 (485)
T 2qzs_A 359 FSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASGFVFED------- 425 (485)
T ss_dssp HHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEECS-------
T ss_pred HHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccceEEECC-------
Confidence 57889998 663 23345788999999999998652 233333220 035666653
Q ss_pred ccCHhHHHHHHHHhh
Q 043290 415 LVMACDIESAVRCLM 429 (430)
Q Consensus 415 ~~~~~~l~~ai~~vl 429 (430)
-+.++++++|.+++
T Consensus 426 -~d~~~la~~i~~ll 439 (485)
T 2qzs_A 426 -SNAWSLLRAIRRAF 439 (485)
T ss_dssp -SSHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHH
Confidence 47899999998876
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=93.97 E-value=0.1 Score=47.98 Aligned_cols=75 Identities=13% Similarity=0.063 Sum_probs=51.6
Q ss_pred ceEEEeccchhhhhc---cCceeEEEeccCc---------hhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEee
Q 043290 339 RGMICGWVPQVEILA---HKAIGGFVSHCGW---------NSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLR 406 (430)
Q Consensus 339 ~~~v~~~~pq~~iL~---~~~~~~~itHgG~---------~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~ 406 (430)
|+.+.+|+|+.++.. .++.+++..-+.+ +-+.|++++|+|+|+.+ ...++..+.+. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 899999999988754 4455444322222 34789999999999865 45677777777 9998764
Q ss_pred cccccCCcccCHhHHHHHHHHh
Q 043290 407 LDYRVGSDLVMACDIESAVRCL 428 (430)
Q Consensus 407 ~~~~~~~~~~~~~~l~~ai~~v 428 (430)
+.+++.+++.++
T Consensus 290 ----------~~~e~~~~i~~l 301 (339)
T 3rhz_A 290 ----------DVEEAIMKVKNV 301 (339)
T ss_dssp ----------SHHHHHHHHHHC
T ss_pred ----------CHHHHHHHHHHh
Confidence 245555555543
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.80 E-value=0.11 Score=49.15 Aligned_cols=76 Identities=17% Similarity=0.045 Sum_probs=52.7
Q ss_pred CceEEEeccchhh---hhccCceeEEEec---cCc-hhHHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccc
Q 043290 338 GRGMICGWVPQVE---ILAHKAIGGFVSH---CGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYR 410 (430)
Q Consensus 338 ~~~~v~~~~pq~~---iL~~~~~~~~itH---gG~-~s~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~ 410 (430)
+++.+.+++|+.+ ++..+++ ||.- =|. ++++||+++|+|+|+ -..+ ....+.+. ..|+.++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC---
Confidence 4788899998765 5677888 6642 133 467999999999998 3322 12233332 46776663
Q ss_pred cCCcccCHhHHHHHHHHhh
Q 043290 411 VGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 411 ~~~~~~~~~~l~~ai~~vl 429 (430)
-++++++++|.+++
T Consensus 364 -----~d~~~la~ai~~ll 377 (413)
T 2x0d_A 364 -----LNPENIAETLVELC 377 (413)
T ss_dssp -----CSHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHH
Confidence 48899999999886
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.07 E-value=1.5 Score=42.84 Aligned_cols=99 Identities=11% Similarity=-0.003 Sum_probs=56.2
Q ss_pred cEEEEeecCCc-cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchh-
Q 043290 272 SVVFLCFGSSG-SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQV- 349 (430)
Q Consensus 272 ~vVyvsfGS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~- 349 (430)
.++++..|... .-..+.+.+.+..+.+.+.++++...+... . ...-.......++++.+....++.
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~-----------~-~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKK-----------F-EKLLKSMEEKYPGKVRAVVKFNAPL 394 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHH-----------H-HHHHHHHHHHSTTTEEEECSCCHHH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCch-----------H-HHHHHHHHhhcCCceEEEEeccHHH
Confidence 45666677764 223333444444444556776665433200 0 000011223345788888777764
Q ss_pred --hhhccCceeEEEec---cCc-hhHHHHHHhCCceeeccc
Q 043290 350 --EILAHKAIGGFVSH---CGW-NSILESLWYGVPIATWPI 384 (430)
Q Consensus 350 --~iL~~~~~~~~itH---gG~-~s~~eal~~GvP~v~~P~ 384 (430)
.+++.+++ ||.= =|+ .+++||+++|+|+|+...
T Consensus 395 ~~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~ 433 (536)
T 3vue_A 395 AHLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST 433 (536)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC
T ss_pred HHHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC
Confidence 36778887 6642 233 489999999999999765
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=86.19 E-value=0.52 Score=42.77 Aligned_cols=39 Identities=13% Similarity=0.202 Sum_probs=33.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+||+++-..+.|++.=...+.+.|+++-.+.++++++.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 369999999999999999999999988444559999976
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=82.78 E-value=7.9 Score=33.52 Aligned_cols=114 Identities=17% Similarity=0.127 Sum_probs=59.5
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCCCC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVLKK 81 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 81 (430)
+++||++..==+. |..=+..|++.|.+ +|+ |++++|..+.. ...........+++..+... .-...+
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~--V~VVAP~~~~S-----g~g~siTl~~pl~~~~~~~~----~~~v~G 76 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGE--VDVVAPDRNRS-----GASNSLTLNAPLHIKNLENG----MISVEG 76 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSE--EEEEEESSCCT-----TCTTCCCCSSCEEEEECTTS----CEEESS
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCC--EEEEecCCCCc-----CcccceecCCCeEEEEecCC----eEEECC
Confidence 4567777664443 44456778888877 889 98999874332 11111122234666554321 111123
Q ss_pred CHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEc----------CCcchHHHHH---HhcCCceEEEecc
Q 043290 82 SPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLD----------FFCVSMVDIA---KELSLPSYIFLTS 142 (430)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D----------~~~~~~~~~A---~~lgiP~v~~~~~ 142 (430)
.+..-... .+..++. .+||+||+- .++++...+| ..+|||.|.++..
T Consensus 77 TPaDCV~l-----------al~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 77 TPTDCVHL-----------AITGVLP---EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp CHHHHHHH-----------HTTTTSS---SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred CHHHHHHH-----------HHHHhcC---CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 33321111 1122222 479999963 3333333333 4579999998753
No 59
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=75.04 E-value=3.8 Score=31.70 Aligned_cols=39 Identities=15% Similarity=0.132 Sum_probs=35.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|++++|++.+.+.-+|-.-..-++..|..+|.+ |.....
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~--Vi~lG~ 39 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFN--VVNIGV 39 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCE--EEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCE--EEECCC
Confidence 888899999999999999999999999999977 775553
No 60
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=71.48 E-value=1.8 Score=40.79 Aligned_cols=38 Identities=8% Similarity=0.169 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCC-----CCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 3 KAELIFVPSPGI-----GHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 3 ~~~i~~~~~p~~-----GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
++||++++.... |=.+-...||++|+++||+ |+++++.
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~Ghe--V~Vvt~~ 88 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFK--KRIILTD 88 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCE--EEEEESS
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCc--eEEEEec
Confidence 568888875432 3335689999999999999 8899975
No 61
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=71.47 E-value=9.3 Score=33.02 Aligned_cols=111 Identities=11% Similarity=0.049 Sum_probs=55.5
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCCCCCHHH
Q 043290 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVLKKSPEY 85 (430)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 85 (430)
|++.-==+. +..=+..|+++|.+.| + |++++|..+.. .....-.....+++....... .....+.+..
T Consensus 4 ILlTNDDGi-~apGi~~L~~~l~~~g-~--V~VvAP~~~~S-----g~g~siT~~~pl~~~~~~~~~---~~~v~GTPaD 71 (251)
T 2wqk_A 4 FLLVNDDGY-FSPGINALREALKSLG-R--VVVVAPDRNLS-----GVGHSLTFTEPLKMRKIDTDF---YTVIDGTPAD 71 (251)
T ss_dssp EEEECSSCT-TCHHHHHHHHHHTTTS-E--EEEEEESSCCT-----TSCCSCCCSSCEEEEEEETTE---EEETTCCHHH
T ss_pred EEEEcCCCC-CcHHHHHHHHHHHhCC-C--EEEEeeCCCCc-----ccccCcCCCCCceeEEeeccc---eeecCCChHH
Confidence 555433222 2233567889999998 5 88888774322 111111122335554433210 0011233433
Q ss_pred HHHHHHHhhhhhHHHHHHHhhccCCCCceEEEE----------cCCcchH---HHHHHhcCCceEEEec
Q 043290 86 FLSLVVESHLPNVKNIVSSRANSGSLQVTGLVL----------DFFCVSM---VDIAKELSLPSYIFLT 141 (430)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~----------D~~~~~~---~~~A~~lgiP~v~~~~ 141 (430)
-.. -.+..++. ..+||+||+ |.+.+++ +.-|..+|||.|.++.
T Consensus 72 CV~-----------lal~~~l~--~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 72 CVH-----------LGYRVILE--EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHH-----------HHHHTTTT--TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHh-----------hhhhhhcC--CCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 111 11223332 237999998 4444443 4455678999998873
No 62
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=70.77 E-value=22 Score=30.40 Aligned_cols=41 Identities=10% Similarity=0.077 Sum_probs=21.5
Q ss_pred CCCcEEE-EEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELI-FVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~-~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|++++|+ |.+.|-- -..-+=.....++++|++|.|.++|..
T Consensus 1 ~~~~~vL~v~aHPDD-e~l~~Ggtia~~~~~G~~V~vv~lT~G 42 (242)
T 2ixd_A 1 MSGLHILAFGAHADD-VEIGMAGTIAKYTKQGYEVGICDLTEA 42 (242)
T ss_dssp -CCCSEEEEESSTTH-HHHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CCCccEEEEEeCCCh-HHHhHHHHHHHHHHCCCeEEEEEEcCC
Confidence 5555444 4444432 122333444566789999766666643
No 63
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=69.05 E-value=20 Score=29.32 Aligned_cols=35 Identities=17% Similarity=0.424 Sum_probs=28.6
Q ss_pred EEEE-cCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 6 LIFV-PSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 6 i~~~-~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|+|. +-++-|--.-...||..|+++|++ |.++-..
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~--vlliD~D 39 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYN--IAVVDTD 39 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCe--EEEEECC
Confidence 5555 456789999999999999999988 8787754
No 64
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=68.99 E-value=10 Score=27.32 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=30.5
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecC
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVS 310 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~ 310 (430)
+.|||-|.| +|+.+.++++.+++.|++++.....+
T Consensus 2 sqifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 2 SQIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp CEEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ceEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 468888876 99999999999999999999887655
No 65
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=68.95 E-value=4.8 Score=39.28 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=27.8
Q ss_pred CcEEEEEcC---C---CCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 3 KAELIFVPS---P---GIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 3 ~~~i~~~~~---p---~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
++||++++. | +.|=-...-.|+++|+++||+ |++++|.
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~--V~Vi~P~ 52 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHR--VMVISPR 52 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCE--EEEEEEC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCe--EEEEecC
Confidence 678999963 2 122223467899999999999 8888865
No 66
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=68.08 E-value=5.7 Score=31.12 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|++.||+++= .|++- ..+++.|.++||+ |+++..
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~--V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQN--VTVISN 34 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCC--EEEEEC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCC--EEEEEC
Confidence 7888999883 46665 7889999999999 888875
No 67
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=63.81 E-value=5 Score=38.30 Aligned_cols=36 Identities=17% Similarity=0.007 Sum_probs=28.2
Q ss_pred EEEEEcCC------CCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 5 ELIFVPSP------GIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~~~p------~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
||++++.- ..|=-.-...|++.|+++||+ |+++++.
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~--V~vi~~~ 43 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVR--TRTLIPG 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCE--EEEEEEC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCe--EEEEecc
Confidence 58888752 234557788999999999999 8888864
No 68
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=62.87 E-value=11 Score=37.68 Aligned_cols=47 Identities=19% Similarity=0.146 Sum_probs=34.1
Q ss_pred CceEEE---eccch---------hhhhccCceeEEEec---cCc-hhHHHHHHhCCceeeccccc
Q 043290 338 GRGMIC---GWVPQ---------VEILAHKAIGGFVSH---CGW-NSILESLWYGVPIATWPIYA 386 (430)
Q Consensus 338 ~~~~v~---~~~pq---------~~iL~~~~~~~~itH---gG~-~s~~eal~~GvP~v~~P~~~ 386 (430)
++|.|+ .|++. .+++..+++ ||.= =|+ .+.+||+++|+|+|+.-..+
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 555554 88876 457889998 6643 344 48999999999999966543
No 69
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=62.22 E-value=5.5 Score=37.98 Aligned_cols=37 Identities=11% Similarity=-0.065 Sum_probs=28.1
Q ss_pred cEEEEEcCC------CCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 4 AELIFVPSP------GIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 4 ~~i~~~~~p------~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+||++++.. ..|=-.-...|+++|+++||+ |+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~--V~vi~~~ 43 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVD--ARVLLPA 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCE--EEEEEEC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCE--EEEEecC
Confidence 358888752 234456778999999999999 8888864
No 70
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=62.06 E-value=57 Score=25.74 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
+++|++.+.+.-+|-.-..-++..|..+|++ |...-
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~e--Vi~lG 53 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFE--VVYTG 53 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCE--EECCC
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCE--EEECC
Confidence 5689999999999999999999999999988 76554
No 71
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=61.07 E-value=9.3 Score=31.96 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=32.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+++||++.-.++-|-+. ...|.+.|.++|++ |.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~e--V~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEERE--VHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCE--EEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCE--EEEEECc
Confidence 35589999999988888 89999999999988 7788876
No 72
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=60.12 E-value=39 Score=29.04 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCC
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLA 44 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~ 44 (430)
+||++..==+. |..=+..|+++|.+.| + |++++|..+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~--V~VVAP~~~ 38 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-R--VVVVAPDRN 38 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-E--EEEEEESSC
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-C--EEEEecCCC
Confidence 34555443332 3344678999999988 8 889998743
No 73
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=56.58 E-value=10 Score=30.74 Aligned_cols=38 Identities=11% Similarity=0.236 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|+ +||++.-.++.|=+. ...|.+.|.++|++ |.++.++
T Consensus 4 m~-k~IllgvTGs~aa~k-~~~ll~~L~~~g~~--V~vv~T~ 41 (175)
T 3qjg_A 4 MG-ENVLICLCGSVNSIN-ISHYIIELKSKFDE--VNVIAST 41 (175)
T ss_dssp -C-CEEEEEECSSGGGGG-HHHHHHHHTTTCSE--EEEEECT
T ss_pred CC-CEEEEEEeCHHHHHH-HHHHHHHHHHCCCE--EEEEECc
Confidence 44 479999888877775 89999999999988 7788876
No 74
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=56.40 E-value=17 Score=32.88 Aligned_cols=75 Identities=8% Similarity=0.101 Sum_probs=56.1
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEe
Q 043290 283 SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVS 362 (430)
Q Consensus 283 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~it 362 (430)
..+.+..+.+.+++.+..++.||..+++.. ..++.++++.+.+-++|+. ||=
T Consensus 61 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g--------------------------~~rlL~~lD~~~i~~~PK~--~~G 112 (331)
T 4e5s_A 61 SSISSRVQDLHEAFRDPNVKAILTTLGGYN--------------------------SNGLLKYLDYDLIRENPKF--FCG 112 (331)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCSC--------------------------GGGGGGGCCHHHHHTSCCE--EEE
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcccccc--------------------------HHHHHhhcChhHHHhCCeE--EEE
Confidence 446677899999999999999999988721 1234556666667677887 888
Q ss_pred ccCchhHHHHHH--hCCceeecccc
Q 043290 363 HCGWNSILESLW--YGVPIATWPIY 385 (430)
Q Consensus 363 HgG~~s~~eal~--~GvP~v~~P~~ 385 (430)
+.-....+-|++ .|+..+-=|+.
T Consensus 113 ySDiTaL~~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 113 YSDITALNNAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp CGGGHHHHHHHHHHHCBCEEECCCG
T ss_pred ecchHHHHHHHHHhhCCcEEEccch
Confidence 888888888887 48877776653
No 75
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=53.85 E-value=40 Score=28.93 Aligned_cols=99 Identities=9% Similarity=0.034 Sum_probs=51.5
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCC-CCCCCCCCCHHHHHHHHHHhhhhhH
Q 043290 20 TLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDP-PLPDVLKKSPEYFLSLVVESHLPNV 98 (430)
Q Consensus 20 ~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (430)
+..|++.|.+.| + |++++|..+.. ....-......+++..+..... ... ...+.+..-..
T Consensus 16 i~aL~~~l~~~g-~--V~VVAP~~~~S-----g~g~siTl~~pl~~~~~~~~~~~~~~-~v~GTPaDCV~---------- 76 (247)
T 1j9j_A 16 IIVLAELLSEEH-E--VFVVAPDKERS-----ATGHSITIHVPLWMKKVFISERVVAY-STTGTPADCVK---------- 76 (247)
T ss_dssp HHHHHHHHTTTS-E--EEEEEESSCCT-----TCTTCCCCSSCCCEEECCCSSSEEEE-EESSCHHHHHH----------
T ss_pred HHHHHHHHHhCC-C--EEEEecCCCCc-----CCcccccCCCCeEEEEeccCCCCceE-EECCcHHHHHH----------
Confidence 678999999888 7 88999874432 1211111223355555532200 000 11233332111
Q ss_pred HHHHHHhhccCCCCceEEEE----------cCCcch---HHHHHHhcCCceEEEec
Q 043290 99 KNIVSSRANSGSLQVTGLVL----------DFFCVS---MVDIAKELSLPSYIFLT 141 (430)
Q Consensus 99 ~~~l~~~~~~~~~~~D~vV~----------D~~~~~---~~~~A~~lgiP~v~~~~ 141 (430)
-.+..++. .+||+||+ |.++++ ++.-|..+|||.|.++.
T Consensus 77 -lal~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 77 -LAYNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp -HHHHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred -HHHHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 11223322 48999996 333333 33445668999999975
No 76
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=53.68 E-value=24 Score=28.55 Aligned_cols=44 Identities=16% Similarity=0.038 Sum_probs=28.4
Q ss_pred EEEeccch-hhhhc-cCceeEEEeccCchhHHH---HHHhCCceeecccc
Q 043290 341 MICGWVPQ-VEILA-HKAIGGFVSHCGWNSILE---SLWYGVPIATWPIY 385 (430)
Q Consensus 341 ~v~~~~pq-~~iL~-~~~~~~~itHgG~~s~~e---al~~GvP~v~~P~~ 385 (430)
.+++..++ ..++. .++ ..++-=||.||..| ++.+++|++.+|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 33444442 23333 344 45666789998665 56799999999984
No 77
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=53.32 E-value=12 Score=31.26 Aligned_cols=38 Identities=13% Similarity=0.206 Sum_probs=31.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|+++||++.-.++.+-+. ...|.+.|.++| + |.++.++
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~--V~vv~T~ 54 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-E--VRAVVTK 54 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-E--EEEEECT
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-C--EEEEEcc
Confidence 346689999999998777 899999999999 8 7788876
No 78
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=53.13 E-value=14 Score=32.41 Aligned_cols=26 Identities=12% Similarity=0.054 Sum_probs=22.8
Q ss_pred EEEeccCchhHHHHHHh------CCceeeccc
Q 043290 359 GFVSHCGWNSILESLWY------GVPIATWPI 384 (430)
Q Consensus 359 ~~itHgG~~s~~eal~~------GvP~v~~P~ 384 (430)
++|+=||-||+.+++.. ++|++++|.
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 39999999999999875 889999875
No 79
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=52.70 E-value=11 Score=31.47 Aligned_cols=38 Identities=11% Similarity=0.006 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCCCCCHHH-HHHHHHHHHhCCCCeEEEEEecC
Q 043290 2 KKAELIFVPSPGIGHLVS-TLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P-~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+.+||++.-.++ +...- ...|.+.|.++|++ |.++.++
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~e--V~vv~T~ 42 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAE--VRPVVSY 42 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCE--EEEEECC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCE--EEEEEeh
Confidence 456899988887 44554 78999999999988 7788876
No 80
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=52.68 E-value=19 Score=32.42 Aligned_cols=74 Identities=8% Similarity=0.038 Sum_probs=52.0
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEe
Q 043290 283 SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVS 362 (430)
Q Consensus 283 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~it 362 (430)
..+.+..+.+.++|.+..++.||..+++.. ..++.++++.+.+-.+|+. ||=
T Consensus 61 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g--------------------------~~rlL~~LD~~~i~~~PK~--~~G 112 (327)
T 4h1h_A 61 SSIRSRVADIHEAFNDSSVKAILTVIGGFN--------------------------SNQLLPYLDYDLISENPKI--LCG 112 (327)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCSC--------------------------GGGGGGGCCHHHHHHSCCE--EEE
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCchh--------------------------HHHHhhhcchhhhccCCeE--EEe
Confidence 446677889999999999999999887621 1234566666777777777 877
Q ss_pred ccCchhHHHHHH--hCCceeeccc
Q 043290 363 HCGWNSILESLW--YGVPIATWPI 384 (430)
Q Consensus 363 HgG~~s~~eal~--~GvP~v~~P~ 384 (430)
..-..+++-+++ .|+....=|+
T Consensus 113 ySDiT~L~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 113 FSDITALATAIYTQTELITYSGAH 136 (327)
T ss_dssp CTTHHHHHHHHHHHHCBCEEECCC
T ss_pred cccccHHHHHHHHhcCeEEEeCcc
Confidence 777777777765 3555444443
No 81
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=51.95 E-value=22 Score=33.24 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=38.7
Q ss_pred hcHhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEE
Q 043290 256 AQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLW 305 (430)
Q Consensus 256 ~~~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw 305 (430)
..-+...+|-...+.+.-|.|-++|+-..+....+.+++++.+.|..++.
T Consensus 250 ~ii~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 250 RLLNHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 34566777886654455677789999887888888999999999998764
No 82
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=51.50 E-value=13 Score=30.23 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=31.1
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|.| ||++.-.++.|=+ -...+.+.|.++|++ |.++.++
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~--V~vv~T~ 38 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDE--VNILFSP 38 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSC--EEEEECG
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCE--EEEEEch
Confidence 444 5888888887777 678999999999999 7788776
No 83
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=50.56 E-value=77 Score=27.25 Aligned_cols=110 Identities=13% Similarity=0.098 Sum_probs=55.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCCC-CCH
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVLK-KSP 83 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~ 83 (430)
||++..==+. |..=+..|++.|.+.| + |++++|..+.. ....-......+++..+... .. ... +.+
T Consensus 3 ~ILlTNDDGi-~apGi~aL~~~L~~~g-~--V~VVAP~~~~S-----g~g~aiTl~~Pl~~~~~~~~---~~-~v~~GTP 69 (254)
T 2v4n_A 3 RILLSNDDGV-HAPGIQTLAKALREFA-D--VQVVAPDRNRS-----GASNSLTLESSLRTFTFDNG---DI-AVQMGTP 69 (254)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-E--EEEEEESSCCT-----TCTTCCCCSSCCEEEECTTS---CE-EEETCCH
T ss_pred eEEEEcCCCC-CCHHHHHHHHHHHhCC-c--EEEEeeCCCCc-----CccCCcCCCCCeEEEEeCCC---Ce-EECCCCH
Confidence 4444433222 3333678899998876 7 88999874432 12111112233555554211 11 112 333
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEE----------cCCcchHH---HHHHhcCCceEEEec
Q 043290 84 EYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVL----------DFFCVSMV---DIAKELSLPSYIFLT 141 (430)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~----------D~~~~~~~---~~A~~lgiP~v~~~~ 141 (430)
..-.. -.+..++. .+||+||+ |.++++.. .-|..+|||.|.++.
T Consensus 70 aDCV~-----------lal~~ll~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 70 TDCVY-----------LGVNALMR---PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHHHH-----------HHHHTTSS---SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHHHH-----------HHHhhccC---CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 33111 11223332 48999996 33444433 334458999999875
No 84
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=50.20 E-value=25 Score=31.34 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=24.1
Q ss_pred hhccCceeEEEeccCchhHHHHHHh----CCceeeccc
Q 043290 351 ILAHKAIGGFVSHCGWNSILESLWY----GVPIATWPI 384 (430)
Q Consensus 351 iL~~~~~~~~itHgG~~s~~eal~~----GvP~v~~P~ 384 (430)
....+++ +|.-||-||+.+++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345666 9999999999999865 899999874
No 85
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=50.04 E-value=12 Score=30.98 Aligned_cols=39 Identities=13% Similarity=0.043 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+++||++.-.++.+=+.-...|.+.|.++|++ |.++.++
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~e--V~vv~T~ 44 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVELGAK--VTPFVTH 44 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHHTTCE--EEEECSS
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhhCCCE--EEEEECh
Confidence 45689999888844443789999999999988 8788876
No 86
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=49.89 E-value=94 Score=26.79 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=23.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|-+.++++++-++.| ==.++|++|+++|++ |.++.
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~ 55 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIA--VYGCA 55 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 334467888877653 346789999999988 76655
No 87
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=48.63 E-value=8.7 Score=31.71 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+++||++.-.++.|=+. ...|.+.|.++|++ |.++.++
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~--V~vv~T~ 44 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKE--IRVVMTK 44 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSE--EEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCE--EEEEEch
Confidence 45689999999888775 78999999999988 7778775
No 88
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=48.55 E-value=1.2e+02 Score=25.60 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=23.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|.+.|+++++-++.| + =.++|++|+++|++ |.+..
T Consensus 1 M~~~k~vlVTGas~g-I--G~aia~~l~~~G~~--vv~~~ 35 (258)
T 3oid_A 1 MEQNKCALVTGSSRG-V--GKAAAIRLAENGYN--IVINY 35 (258)
T ss_dssp --CCCEEEESSCSSH-H--HHHHHHHHHHTTCE--EEEEE
T ss_pred CCCCCEEEEecCCch-H--HHHHHHHHHHCCCE--EEEEc
Confidence 555567888766542 2 46789999999988 76653
No 89
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=48.38 E-value=37 Score=25.02 Aligned_cols=64 Identities=13% Similarity=-0.015 Sum_probs=44.1
Q ss_pred ccCceeEEEeccCchh---------HHHHHHhCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHH
Q 043290 353 AHKAIGGFVSHCGWNS---------ILESLWYGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIES 423 (430)
Q Consensus 353 ~~~~~~~~itHgG~~s---------~~eal~~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ 423 (430)
..+++ +|--+|..| +-.|...|+|+|++=.++.+. .-..+.+. +.-+ - .++.+.|.+
T Consensus 37 ~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~i--V--------~Wn~~~I~~ 102 (111)
T 1eiw_A 37 EDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEV--V--------GWNPHCIRD 102 (111)
T ss_dssp SSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEE--E--------CSCHHHHHH
T ss_pred ccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Ccee--c--------cCCHHHHHH
Confidence 34555 888888887 667888999999987777652 22224443 3222 2 578999999
Q ss_pred HHHHhhC
Q 043290 424 AVRCLMD 430 (430)
Q Consensus 424 ai~~vl~ 430 (430)
||+..++
T Consensus 103 aI~~~~~ 109 (111)
T 1eiw_A 103 ALEDALD 109 (111)
T ss_dssp HHHHHHC
T ss_pred HHHhccC
Confidence 9998753
No 90
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=46.52 E-value=26 Score=26.23 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=24.4
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEE
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~ 307 (430)
..+|+|+.||--....+.+..+.+.+++...++.+.+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 4699999999542233457778888876545555554
No 91
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=46.29 E-value=23 Score=28.97 Aligned_cols=35 Identities=14% Similarity=0.221 Sum_probs=30.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
||++.-.++.|-+ =...|.+.|.++|++ |.++.++
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~--V~vv~T~ 37 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFS--VDLVISR 37 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCE--EEEEECH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCE--EEEEECh
Confidence 6999999998865 579999999999988 7788876
No 92
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=45.42 E-value=93 Score=26.52 Aligned_cols=98 Identities=11% Similarity=0.050 Sum_probs=52.5
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCC-CC-C-CCCCCCHHHHHHHHHHhhhh
Q 043290 20 TLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDP-PL-P-DVLKKSPEYFLSLVVESHLP 96 (430)
Q Consensus 20 ~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~ 96 (430)
+..|++.|.+.| + |++++|..+.. ....-......+++..++...+ ++ . -...+.+..-...-
T Consensus 16 i~aL~~~l~~~g-~--V~VVAP~~~~S-----g~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV~la------ 81 (244)
T 2e6c_A 16 LWALAEAASQFG-E--VFVAAPDTEQS-----AAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCVALG------ 81 (244)
T ss_dssp HHHHHHHHTTTS-E--EEEEEECSSCC-----CCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHHHHH------
T ss_pred HHHHHHHHHhCC-C--EEEEecCCCCc-----CCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHHHHH------
Confidence 678999999888 7 88999874322 1111112234577766643210 01 0 01123444321111
Q ss_pred hHHHHHHHhhccCCCCceEEEE----------cCCcch---HHHHHHhcCCceEEEec
Q 043290 97 NVKNIVSSRANSGSLQVTGLVL----------DFFCVS---MVDIAKELSLPSYIFLT 141 (430)
Q Consensus 97 ~~~~~l~~~~~~~~~~~D~vV~----------D~~~~~---~~~~A~~lgiP~v~~~~ 141 (430)
+. + ..+||+||+ |.++.+ ++.-|..+|||.|.++.
T Consensus 82 -----l~-l----~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 82 -----LH-L----FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp -----HH-H----SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred -----Hc-C----CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 11 2 148999996 333333 33445568999999874
No 93
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=45.24 E-value=30 Score=30.88 Aligned_cols=76 Identities=12% Similarity=0.201 Sum_probs=56.8
Q ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhc-cCceeEE
Q 043290 282 GSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILA-HKAIGGF 360 (430)
Q Consensus 282 ~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~-~~~~~~~ 360 (430)
...+.+..+.+.+++.+..++.||..+++-- ..++.++++.+.+-. +|+. |
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg--------------------------a~rlLp~LD~~~i~~a~PK~--~ 113 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGYG--------------------------CGQLLPGLDWGRLQAASPRP--L 113 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSSC--------------------------GGGGTTTCCHHHHHHSCCCC--E
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCcC--------------------------HHHHhhccchhhhhccCCCE--E
Confidence 4557788999999999999999999988721 113345556666666 7887 9
Q ss_pred EeccCchhHHHHHHh-CCceeecccc
Q 043290 361 VSHCGWNSILESLWY-GVPIATWPIY 385 (430)
Q Consensus 361 itHgG~~s~~eal~~-GvP~v~~P~~ 385 (430)
|=+.-....+-|++. |++-+-=|+.
T Consensus 114 iGySDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 114 IGFSDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp EECGGGHHHHHHHHHTTCCEEECCCG
T ss_pred EEEchhHHHHHHHHHcCCcEEECHhh
Confidence 988888888888873 7777776654
No 94
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=43.24 E-value=1.4e+02 Score=24.91 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=24.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|-+.|.++++-++.| ==.++|++|+++|++ |.+...
T Consensus 1 Ml~~k~~lVTGas~g---IG~~ia~~l~~~G~~--V~~~~~ 36 (246)
T 3osu_A 1 MKMTKSALVTGASRG---IGRSIALQLAEEGYN--VAVNYA 36 (246)
T ss_dssp CCCSCEEEETTCSSH---HHHHHHHHHHHTTCE--EEEEES
T ss_pred CCCCCEEEEECCCCh---HHHHHHHHHHHCCCE--EEEEeC
Confidence 444457777766542 346789999999988 766553
No 95
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=43.23 E-value=16 Score=30.45 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHh-CCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTD-RDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~-rGH~v~Vt~~~~~ 42 (430)
|+++||++.-.++.+=+. ...|.+.|.+ +|++ |.++.++
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~--V~vv~T~ 56 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLE--VAVVTTE 56 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEE--EEEEECT
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCE--EEEEECH
Confidence 356789999999888665 5899999999 8977 8888876
No 96
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=43.08 E-value=44 Score=24.76 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCCCCH--HHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIGHL--VSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~--~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|||. +.++..+-+|+. .-.+.+|..+.+.||+ |+++-..
T Consensus 1 Mkk~-~~vv~~~P~g~~~~~~al~~a~a~~a~~~~--v~vff~~ 41 (119)
T 2d1p_B 1 MKRI-AFVFSTAPHGTAAGREGLDALLATSALTDD--LAVFFIA 41 (119)
T ss_dssp CCCE-EEEECSCTTTSTHHHHHHHHHHHHHTTCSC--EEEEECG
T ss_pred CcEE-EEEEcCCCCCcHHHHHHHHHHHHHHhCCCC--EEEEEeh
Confidence 7774 444455555766 5567888899999999 5555543
No 97
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=42.84 E-value=31 Score=31.19 Aligned_cols=75 Identities=11% Similarity=0.119 Sum_probs=57.1
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEe
Q 043290 283 SFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVS 362 (430)
Q Consensus 283 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~it 362 (430)
..+.+..+.+.+++.+..++.||..+++.- ..++.++++.+.+-++|+. ||=
T Consensus 62 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g--------------------------~~rlL~~lD~~~i~~~PK~--~~G 113 (336)
T 3sr3_A 62 GSIQERAKELNALIRNPNVSCIMSTIGGMN--------------------------SNSLLPYIDYDAFQNNPKI--MIG 113 (336)
T ss_dssp SCHHHHHHHHHHHHHCTTEEEEEESCCCSC--------------------------GGGGGGGSCHHHHHHSCCE--EEE
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcccccc--------------------------HHHHhhhcChhHHhhCCeE--EEE
Confidence 446677889999999999999999988721 1234556666667678887 988
Q ss_pred ccCchhHHHHHH--hCCceeecccc
Q 043290 363 HCGWNSILESLW--YGVPIATWPIY 385 (430)
Q Consensus 363 HgG~~s~~eal~--~GvP~v~~P~~ 385 (430)
+.-....+-|++ .|+..+-=|+.
T Consensus 114 ySDiTaL~~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 114 YSDATALLLGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp CGGGHHHHHHHHHHHCCCEEECCCH
T ss_pred echHHHHHHHHHHhcCceEEECChh
Confidence 888888888887 58888777763
No 98
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=42.69 E-value=1.5e+02 Score=25.12 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=24.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|.| .++++-++.| ==.++|++|+++|.+ |.+..
T Consensus 1 MnK--~vlVTGas~G---IG~aia~~la~~Ga~--V~~~~ 33 (247)
T 3ged_A 1 MNR--GVIVTGGGHG---IGKQICLDFLEAGDK--VCFID 33 (247)
T ss_dssp -CC--EEEEESTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CCC--EEEEecCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 676 7888877775 236889999999988 66655
No 99
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=42.27 E-value=1e+02 Score=26.18 Aligned_cols=31 Identities=13% Similarity=-0.020 Sum_probs=23.6
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
++++++-++.| ==.++|++|+++|++ |.++.
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~--V~~~~ 42 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVN--LVLHY 42 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCE--EEEEE
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCE--EEEEe
Confidence 57888877665 347899999999988 76654
No 100
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=41.86 E-value=63 Score=28.25 Aligned_cols=22 Identities=5% Similarity=-0.064 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCC
Q 043290 20 TLEFAKHLTDRDDRISVTLLSMKLA 44 (430)
Q Consensus 20 ~l~La~~L~~rGH~v~Vt~~~~~~~ 44 (430)
+..|++.|.+.| + |++++|..+
T Consensus 16 i~aL~~aL~~~g-~--V~VVAP~~~ 37 (280)
T 1l5x_A 16 LRLLYQFALSLG-D--VDVVAPESP 37 (280)
T ss_dssp HHHHHHHHGGGS-E--EEEEEESSC
T ss_pred HHHHHHHHHhCC-C--EEEEecCCC
Confidence 678999999988 7 889998743
No 101
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=41.81 E-value=1.4e+02 Score=24.36 Aligned_cols=103 Identities=10% Similarity=-0.012 Sum_probs=59.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCC-CChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCCCC
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLA-VAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVLKK 81 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 81 (430)
+..|.+++-.+.|-..-.+.+|.+.+.+|.+ |-++..-.. .........+.+ ++++.....+... ...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~r--V~~vQF~Kg~~~~gE~~~l~~L-----~v~~~~~g~gf~~----~~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKN--VGVVQFIKGTWPNGERNLLEPH-----GVEFQVMATGFTW----ETQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCC--EEEEESSCCSSCCHHHHHHGGG-----TCEEEECCTTCCC----CGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCe--EEEEEeeCCCCCccHHHHHHhC-----CcEEEEccccccc----CCC
Confidence 4469999999999999999999999999988 777753321 111111223322 3777777653211 101
Q ss_pred CHHHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcCCcc
Q 043290 82 SPEYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDFFCV 123 (430)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~~~~ 123 (430)
.... -.......+..+.+.+. +.++|+||.|-+..
T Consensus 97 ~~~~----~~~~a~~~l~~a~~~l~---~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 97 NREA----DTAACMAVWQHGKRMLA---DPLLDMVVLDELTY 131 (196)
T ss_dssp GHHH----HHHHHHHHHHHHHHHTT---CTTCSEEEEETHHH
T ss_pred CcHH----HHHHHHHHHHHHHHHHh---cCCCCEEEEeCCCc
Confidence 1111 11122333333333332 35899999997643
No 102
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.75 E-value=1.2e+02 Score=25.87 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|.+.++++++-++.| =-.++|++|+++|++ |.+..
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~--V~~~~ 57 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWR--VGVNY 57 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCE--EEEEc
Confidence 444567777766543 346899999999988 76654
No 103
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=41.57 E-value=26 Score=28.90 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=30.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhC-CCCeEEEEEecC
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDR-DDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~r-GH~v~Vt~~~~~ 42 (430)
||++.-.++-|-+. ...|.+.|.++ |++ |.++.++
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~--V~vv~T~ 37 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVE--THLVMSK 37 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCE--EEEEECH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCE--EEEEECc
Confidence 68888899888776 89999999999 988 7788876
No 104
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=41.41 E-value=68 Score=23.22 Aligned_cols=39 Identities=13% Similarity=0.218 Sum_probs=31.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|+++||++++..+.|--.-.-.+=+.+.++|.+ +.+...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~--~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVP--VIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCS--EEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCC--eEEEEe
Confidence 777789999999998887777888999999987 544443
No 105
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=41.30 E-value=35 Score=28.00 Aligned_cols=28 Identities=7% Similarity=0.149 Sum_probs=22.9
Q ss_pred eEEEeccCchhHHHHHHhCCceeeccccc
Q 043290 358 GGFVSHCGWNSILESLWYGVPIATWPIYA 386 (430)
Q Consensus 358 ~~~itHgG~~s~~eal~~GvP~v~~P~~~ 386 (430)
.++|+.||-....... -.+|+|-+++.+
T Consensus 53 dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 53 DAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp SEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred eEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3499999998888875 579999998744
No 106
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=40.87 E-value=1e+02 Score=24.79 Aligned_cols=34 Identities=21% Similarity=0.152 Sum_probs=18.3
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEE
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~ 307 (430)
+.|-|=+||.. |-...++..+.|++.|..+-..+
T Consensus 23 p~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V 56 (181)
T 4b4k_A 23 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKV 56 (181)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEE
Confidence 45555566633 33445556666666666554443
No 107
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=40.77 E-value=1.5e+02 Score=27.88 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=32.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCC
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLA 44 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~ 44 (430)
-|+++-.++.|-..-...||..|+++|++ |.+++....
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~k--Vllv~~D~~ 139 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYK--VGVVCSDTW 139 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCC--EEEEECCCS
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCe--EEEEeCCCc
Confidence 57777788999999999999999999988 878886543
No 108
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=40.14 E-value=1.5e+02 Score=27.32 Aligned_cols=24 Identities=21% Similarity=0.257 Sum_probs=17.6
Q ss_pred CceEEEE--cCCcchHHHHHHhcCCc
Q 043290 112 QVTGLVL--DFFCVSMVDIAKELSLP 135 (430)
Q Consensus 112 ~~D~vV~--D~~~~~~~~~A~~lgiP 135 (430)
++|.|+. |.....+..+++++|+|
T Consensus 75 ~id~V~~~~e~~~~~~a~l~e~lglp 100 (425)
T 3vot_A 75 PFDGVMTLFEPALPFTAKAAEALNLP 100 (425)
T ss_dssp CCSEEECCCGGGHHHHHHHHHHTTCS
T ss_pred CCCEEEECCchhHHHHHHHHHHcCCC
Confidence 7898874 44444566788999999
No 109
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=38.72 E-value=30 Score=28.64 Aligned_cols=37 Identities=16% Similarity=0.042 Sum_probs=32.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
+.+|++.+.++..|-....-++..|..+|++ |..+..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~--v~~LG~ 124 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFT--VYNLGV 124 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCE--EEECCS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCE--EEECCC
Confidence 4589999999999999999999999999988 776664
No 110
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=38.65 E-value=37 Score=29.40 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|++++|++. ++ |- =-..|++.|.++||+ |+.++-
T Consensus 1 M~~~~ilVt--Ga-G~--iG~~l~~~L~~~g~~--V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIA--GC-GD--LGLELARRLTAQGHE--VTGLRR 34 (286)
T ss_dssp -CCCCEEEE--CC-SH--HHHHHHHHHHHTTCC--EEEEEC
T ss_pred CCCCcEEEE--CC-CH--HHHHHHHHHHHCCCE--EEEEeC
Confidence 776677766 45 74 456789999999999 777763
No 111
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=38.52 E-value=51 Score=28.39 Aligned_cols=38 Identities=16% Similarity=0.058 Sum_probs=33.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+.+|++.+.++..|-....-++..|..+|++ |..+...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~--Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYN--VVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCE--EEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCE--EEECCCC
Confidence 5689999999999999999999999999977 7776644
No 112
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=38.40 E-value=1.7e+02 Score=24.20 Aligned_cols=38 Identities=11% Similarity=0.110 Sum_probs=23.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|.|+||+++..+..+.+ .+|.+++.+.+-.+.|..+.+
T Consensus 5 m~~~ri~vl~SG~gsnl---~all~~~~~~~l~~~I~~Vis 42 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSNM---EALIRAAQAPGFPAEIVAVFS 42 (209)
T ss_dssp -CCEEEEEEESSCCHHH---HHHHHHHTSTTCSEEEEEEEE
T ss_pred CCCccEEEEEECCcHHH---HHHHHHHHcCCCCcEEEEEEE
Confidence 78889999988876554 455555655442233555554
No 113
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.32 E-value=50 Score=27.81 Aligned_cols=64 Identities=17% Similarity=0.139 Sum_probs=42.1
Q ss_pred CceeEEEeccCchhHHHHHHhCCceeeccccc-c----------------------cchhHHHHhhhhceeEEeeccccc
Q 043290 355 KAIGGFVSHCGWNSILESLWYGVPIATWPIYA-E----------------------QQLNAFRMVKEQGLALDLRLDYRV 411 (430)
Q Consensus 355 ~~~~~~itHgG~~s~~eal~~GvP~v~~P~~~-D----------------------Q~~~a~rv~~~~G~G~~~~~~~~~ 411 (430)
+++ +|+.||-......- -.+|+|-+++.+ | ....+..+++.+|+-+....
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~---- 136 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRS---- 136 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEE----
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEE----
Confidence 555 99999999888875 579999998744 3 23334445555555544332
Q ss_pred CCcccCHhHHHHHHHHh
Q 043290 412 GSDLVMACDIESAVRCL 428 (430)
Q Consensus 412 ~~~~~~~~~l~~ai~~v 428 (430)
.-+++++.++|+++
T Consensus 137 ---~~~~ee~~~~i~~l 150 (225)
T 2pju_A 137 ---YITEEDARGQINEL 150 (225)
T ss_dssp ---ESSHHHHHHHHHHH
T ss_pred ---eCCHHHHHHHHHHH
Confidence 34677777777665
No 114
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=38.16 E-value=1.9e+02 Score=24.66 Aligned_cols=27 Identities=19% Similarity=0.210 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 13 GIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
.-|-..-.+.|++.|+++|.+ |.++-+
T Consensus 37 ~vGKT~vt~gL~~~l~~~G~~--V~~fKP 63 (251)
T 3fgn_A 37 GVGKTVVCAALASAARQAGID--VAVCKP 63 (251)
T ss_dssp TSCHHHHHHHHHHHHHHTTCC--EEEEEE
T ss_pred CCcHHHHHHHHHHHHHHCCCe--EEEEee
Confidence 568999999999999999988 878874
No 115
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=37.98 E-value=16 Score=33.25 Aligned_cols=37 Identities=8% Similarity=0.080 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCCC-C---HHHHHHHHHHHHhCCCCeEEEEE
Q 043290 1 MKKAELIFVPSPGIG-H---LVSTLEFAKHLTDRDDRISVTLL 39 (430)
Q Consensus 1 m~~~~i~~~~~p~~G-H---~~P~l~La~~L~~rGH~v~Vt~~ 39 (430)
|+|+||+++.-+..+ | +.-...++++|.+.||+ |..+
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~--v~~i 41 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFD--IIPI 41 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEE--EEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCE--EEEE
Confidence 999999988543222 3 34556789999999988 5555
No 116
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=36.96 E-value=1.4e+02 Score=28.54 Aligned_cols=24 Identities=8% Similarity=-0.047 Sum_probs=19.9
Q ss_pred CceEEEEcCCcchHHHHHHhcCCceEE
Q 043290 112 QVTGLVLDFFCVSMVDIAKELSLPSYI 138 (430)
Q Consensus 112 ~~D~vV~D~~~~~~~~~A~~lgiP~v~ 138 (430)
+||++|... ....+|+++|||++.
T Consensus 417 ~pDL~ig~~---~~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 417 KPDLIGSGI---KEKFIFQKMGIPFRE 440 (492)
T ss_dssp CCSEEEECH---HHHHHHHHTTCCEEE
T ss_pred CCcEEEeCc---chhHHHHHcCCCEEe
Confidence 899999864 456889999999774
No 117
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=36.65 E-value=43 Score=26.45 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=24.6
Q ss_pred EEEEeecCCccCCHHHHHHHHHHHHhCC-CcEE
Q 043290 273 VVFLCFGSSGSFDVAQVKEIAIGLERSG-YNFL 304 (430)
Q Consensus 273 vVyvsfGS~~~~~~~~~~~~~~al~~~~-~~~v 304 (430)
.+|+|+||......+.++..+++|++.+ .+++
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 34 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHIL 34 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCcee
Confidence 5899999987766777888888898763 4443
No 118
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=36.25 E-value=66 Score=24.75 Aligned_cols=45 Identities=9% Similarity=0.127 Sum_probs=30.0
Q ss_pred HHHHHhhcC---CCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEec
Q 043290 260 KIFQWLDDL---AESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (430)
Q Consensus 260 ~l~~~l~~~---~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~ 309 (430)
-+.+|+..+ |.++ |++|.+ ..+.+.+.++++.|.+.|+.++ ++++
T Consensus 11 ~~Ka~~aag~~lP~~g-vliSv~---d~dK~~l~~~a~~l~~lGf~i~-AT~G 58 (143)
T 2yvq_A 11 FLKAMLSTGFKIPQKG-ILIGIQ---QSFRPRFLGVAEQLHNEGFKLF-ATEA 58 (143)
T ss_dssp HHHHHTSCSCCCCCSE-EEEECC---GGGHHHHHHHHHHHHTTTCEEE-EEHH
T ss_pred HHHHHHhcCCCCCCCC-EEEEec---ccchHHHHHHHHHHHHCCCEEE-ECch
Confidence 344555443 2456 888765 3467778889999999999854 4443
No 119
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=35.53 E-value=54 Score=31.24 Aligned_cols=34 Identities=9% Similarity=0.142 Sum_probs=23.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
++++-+|++.. +=.-++.+|+.|.+.|. .+++|.
T Consensus 8 ~~i~~aLISVs---DK~glvelAk~L~~lGf----eI~ATg 41 (523)
T 3zzm_A 8 RPIRRALISVY---DKTGLVDLAQGLSAAGV----EIISTG 41 (523)
T ss_dssp CCCCEEEEEES---SCTTHHHHHHHHHHTTC----EEEECH
T ss_pred ccccEEEEEEe---ccccHHHHHHHHHHCCC----EEEEcc
Confidence 34455677763 34457899999999993 367765
No 120
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=35.52 E-value=59 Score=25.66 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=24.1
Q ss_pred EEEEeecCCccCCHHHHHHHHHHHHhCC
Q 043290 273 VVFLCFGSSGSFDVAQVKEIAIGLERSG 300 (430)
Q Consensus 273 vVyvsfGS~~~~~~~~~~~~~~al~~~~ 300 (430)
.+|+++||......+.++..+++|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998778888999999998853
No 121
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=35.37 E-value=1.1e+02 Score=24.33 Aligned_cols=16 Identities=19% Similarity=0.274 Sum_probs=7.7
Q ss_pred HHHHHHHHHHhCCCcE
Q 043290 288 QVKEIAIGLERSGYNF 303 (430)
Q Consensus 288 ~~~~~~~al~~~~~~~ 303 (430)
..++....|+..|.++
T Consensus 21 v~~~a~~~l~~~gi~~ 36 (169)
T 3trh_A 21 TMETAFTELKSLGIPF 36 (169)
T ss_dssp HHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHcCCCE
Confidence 3444455555555544
No 122
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=34.54 E-value=2.3e+02 Score=24.68 Aligned_cols=36 Identities=14% Similarity=0.404 Sum_probs=28.3
Q ss_pred EEEEEcC--CCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 5 ELIFVPS--PGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~~~--p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
++++++. ++-|--.-...||..|+++|.+ |.++-..
T Consensus 105 kvI~vts~kgG~GKTtva~nLA~~lA~~G~r--VLLID~D 142 (299)
T 3cio_A 105 NILMITGATPDSGKTFVSSTLAAVIAQSDQK--VLFIDAD 142 (299)
T ss_dssp CEEEEEESSSSSCHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHhCCCc--EEEEECC
Confidence 4544443 6789999999999999999988 7777644
No 123
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.22 E-value=36 Score=23.01 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=30.9
Q ss_pred hCCceeecccccccchhHHH---HhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 375 YGVPIATWPIYAEQQLNAFR---MVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 375 ~GvP~v~~P~~~DQ~~~a~r---v~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
+|+|++++=....|.+.-.. ..+. |+...+-+ ...++++..-++|.|
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk-------stdpeeltqrvrefl 99 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK-------STDPEELTQRVREFL 99 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE-------CCCHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc-------cCCHHHHHHHHHHHH
Confidence 68888887766666543322 1233 66655544 578999999998876
No 124
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=33.22 E-value=42 Score=30.81 Aligned_cols=76 Identities=11% Similarity=0.065 Sum_probs=55.5
Q ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEE
Q 043290 282 GSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFV 361 (430)
Q Consensus 282 ~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~i 361 (430)
+..+.+..+.+.+++.+..++.||..+++.- ..++.++++.+.|-++|+. ||
T Consensus 91 agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyg--------------------------a~rlLp~LD~~~i~~~PK~--fi 142 (371)
T 3tla_A 91 SGTIKERAQEFNELVYNPDITCIMSTIGGDN--------------------------SNSLLPFLDYDAIIANPKI--II 142 (371)
T ss_dssp SSCHHHHHHHHHHHHTCTTEEEEEESCCCSC--------------------------GGGGGGGSCHHHHHHSCCE--EE
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcccccc--------------------------HHHHHhhcChhhHHhCCcE--EE
Confidence 3456678899999999999999999988721 1234556666666677877 88
Q ss_pred eccCchhHHHHHH--hCCceeecccc
Q 043290 362 SHCGWNSILESLW--YGVPIATWPIY 385 (430)
Q Consensus 362 tHgG~~s~~eal~--~GvP~v~~P~~ 385 (430)
=..-....+-|++ .|++.+-=|+.
T Consensus 143 GySDiTaL~~ai~~k~Gl~T~hGP~~ 168 (371)
T 3tla_A 143 GYSDTTALLAGIYAKTGLITFYGPAL 168 (371)
T ss_dssp ECGGGHHHHHHHHHHHCBCEEECCCH
T ss_pred EechHHHHHHHHHHHcCCEEEECccc
Confidence 8877777777776 48877766653
No 125
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=33.19 E-value=2.1e+02 Score=23.75 Aligned_cols=102 Identities=14% Similarity=0.143 Sum_probs=64.1
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchh
Q 043290 289 VKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNS 368 (430)
Q Consensus 289 ~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s 368 (430)
-.++++.|+..+..++...+.. .-+|+.|.+..+.+++=+ |+++ .=...|...
T Consensus 78 d~~~~~~l~~~~~Dlivlagy~---------------~iL~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~p 130 (215)
T 3da8_A 78 DVAITAATAAHEPDLVVSAGFM---------------RILGPQFLSRFYGRTLNT----------HPAL--LPAFPGTHG 130 (215)
T ss_dssp HHHHHHHHHTTCCSEEEEEECC---------------SCCCHHHHHHHTTTEEEE----------ESSC--TTSSCSTTH
T ss_pred hHHHHHHHHhhCCCEEEEcCch---------------hhCCHHHHhhccCCeEEe----------Cccc--ccCCCCchH
Confidence 3458889999888988888765 347888877765443221 2222 222358899
Q ss_pred HHHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 369 ILESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 369 ~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
+..|+.+|+...++-++. +..+.+.-+.+. - +.+.. .-|.++|.+.+.+
T Consensus 131 i~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~-~--v~I~~-------~dt~~~L~~rl~~ 181 (215)
T 3da8_A 131 VADALAYGVKVTGATVHLVDAGTDTGPILAQQ-P--VPVLD-------GDDEETLHERIKV 181 (215)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEE-E--EECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEE-E--eecCC-------CCCHHHHHHHHHH
Confidence 999999999998888654 344444333332 1 22222 3467777665543
No 126
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=32.81 E-value=53 Score=26.02 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=25.0
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhC-CCcEE
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERS-GYNFL 304 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~-~~~~v 304 (430)
..+|+|+||......+.++..+++|.+. +.+++
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~~~~v~ 38 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYDGISVS 38 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHSTTEEEE
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCCCCceE
Confidence 4799999998766677788888888874 34433
No 127
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=32.77 E-value=1.5e+02 Score=28.60 Aligned_cols=32 Identities=9% Similarity=0.044 Sum_probs=20.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+|++++ |.-.=.+.|++.|.+-|.+ |+.+.+.
T Consensus 365 KrvaI~-----gd~~~~~~la~fL~elGm~--vv~v~~~ 396 (523)
T 3u7q_B 365 KRFALW-----GDPDFVMGLVKFLLELGCE--PVHILCH 396 (523)
T ss_dssp CEEEEE-----CSHHHHHHHHHHHHHTTCE--EEEEEET
T ss_pred CEEEEE-----CCchHHHHHHHHHHHcCCE--EEEEEeC
Confidence 467776 3334456788888889966 6665544
No 128
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=32.61 E-value=84 Score=24.52 Aligned_cols=37 Identities=14% Similarity=0.058 Sum_probs=25.6
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHhC-C-CcEEEEE
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERS-G-YNFLWSL 307 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~~-~-~~~vw~~ 307 (430)
..+|+|+-||--....+.+..+++.+++. + ..+-+.+
T Consensus 25 ~avlLv~HGS~~p~~~~~~~~la~~l~~~~~~~~V~~af 63 (156)
T 1tjn_A 25 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAF 63 (156)
T ss_dssp EEEEEEECCTTSTTHHHHHHHHHHHHHHHTSSSEEEEEE
T ss_pred cCEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEEE
Confidence 46999999996433445677888888763 3 5665654
No 129
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=32.09 E-value=61 Score=27.36 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=33.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+.+|++..-|+-|-..=++.+|..|+++|++ |.++...
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~--V~v~d~D 43 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVR--VMAGVVE 43 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCC--EEEEEeC
Confidence 4579999999999999999999999999988 7666654
No 130
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.79 E-value=1.3e+02 Score=28.53 Aligned_cols=24 Identities=17% Similarity=-0.072 Sum_probs=19.3
Q ss_pred CceEEEEcCCcchHHHHHHhcCCceEE
Q 043290 112 QVTGLVLDFFCVSMVDIAKELSLPSYI 138 (430)
Q Consensus 112 ~~D~vV~D~~~~~~~~~A~~lgiP~v~ 138 (430)
+||++|... ....+|+++|||++.
T Consensus 401 ~pDL~ig~~---~~~~~a~k~gIP~~~ 424 (483)
T 3pdi_A 401 QADILIAGG---RNMYTALKGRVPFLD 424 (483)
T ss_dssp TCSEEECCG---GGHHHHHHTTCCBCC
T ss_pred CCCEEEECC---chhHHHHHcCCCEEE
Confidence 899999764 456789999999753
No 131
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.77 E-value=2.4e+02 Score=23.92 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=23.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
+.++++-++.| ==.++|++|+++|++ |.++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~--V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKG---IGAEIAKTLASMGLK--VWINYR 61 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCE--EEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCE--EEEEeC
Confidence 46777666543 346899999999987 766663
No 132
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=31.66 E-value=58 Score=25.76 Aligned_cols=28 Identities=14% Similarity=0.258 Sum_probs=22.9
Q ss_pred EEEEeecCCccCCHHHHHHHHHHHHhCC
Q 043290 273 VVFLCFGSSGSFDVAQVKEIAIGLERSG 300 (430)
Q Consensus 273 vVyvsfGS~~~~~~~~~~~~~~al~~~~ 300 (430)
.+|+|+||......+.++..+++|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999988766677888888888753
No 133
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=31.46 E-value=64 Score=25.44 Aligned_cols=17 Identities=24% Similarity=0.143 Sum_probs=9.5
Q ss_pred CCceeecccccccchhHHHHh
Q 043290 376 GVPIATWPIYAEQQLNAFRMV 396 (430)
Q Consensus 376 GvP~v~~P~~~DQ~~~a~rv~ 396 (430)
|+|+..+ |-..||..++
T Consensus 108 GvpVatv----~~~~nAa~lA 124 (159)
T 3rg8_A 108 GISPALV----LEPKNAALLA 124 (159)
T ss_dssp TCCCEEC----CSHHHHHHHH
T ss_pred CCceEEe----cCchHHHHHH
Confidence 6665554 5556665543
No 134
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=31.36 E-value=77 Score=25.91 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=32.6
Q ss_pred hhHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEEecchhH
Q 043290 96 PNVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLTSNLG 145 (430)
Q Consensus 96 ~~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 145 (430)
...++.++++.+ .+.++||.|. .+..+|+++|+|.+.+.+..-+
T Consensus 129 ~e~~~~i~~l~~---~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKT---ENIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHH---TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHH---CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 456667777755 5899999885 3478899999998877765443
No 135
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=31.29 E-value=1.2e+02 Score=26.65 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=25.0
Q ss_pred hcHhHHHHHhhcCCCCcEEEEeecCCc-------cCCHHHHHHHHHHH
Q 043290 256 AQYQKIFQWLDDLAESSVVFLCFGSSG-------SFDVAQVKEIAIGL 296 (430)
Q Consensus 256 ~~~~~l~~~l~~~~~~~vVyvsfGS~~-------~~~~~~~~~~~~al 296 (430)
..+++..+|.++-. --.+-|++||.- .++.+.+++|.+.+
T Consensus 159 T~Peea~~Fv~~Tg-vD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v 205 (288)
T 3q94_A 159 ADPAECKHLVEATG-IDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT 205 (288)
T ss_dssp CCHHHHHHHHHHHC-CSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHC-CCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc
Confidence 45778888886532 237888888862 34555566555544
No 136
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=31.06 E-value=29 Score=26.05 Aligned_cols=40 Identities=10% Similarity=0.030 Sum_probs=25.2
Q ss_pred hHHHHHHHhhccCCCCceEEEEcCCcch--HHHHHHh---cCCceEEE
Q 043290 97 NVKNIVSSRANSGSLQVTGLVLDFFCVS--MVDIAKE---LSLPSYIF 139 (430)
Q Consensus 97 ~~~~~l~~~~~~~~~~~D~vV~D~~~~~--~~~~A~~---lgiP~v~~ 139 (430)
.-++.++.+.+ .+||+||.|...+. +..++++ .++|.+.+
T Consensus 41 ~g~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 41 RMQEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CHHHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CHHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 34455554433 48999999998874 4555543 58885433
No 137
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=30.89 E-value=34 Score=30.04 Aligned_cols=32 Identities=13% Similarity=0.023 Sum_probs=25.5
Q ss_pred hhccCceeEEEeccCchhHHHHHHh----CCceeeccc
Q 043290 351 ILAHKAIGGFVSHCGWNSILESLWY----GVPIATWPI 384 (430)
Q Consensus 351 iL~~~~~~~~itHgG~~s~~eal~~----GvP~v~~P~ 384 (430)
+-..+++ +|.=||-||+.+++.. ++|+++++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3344566 9999999999999854 789999883
No 138
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=30.74 E-value=1.8e+02 Score=25.72 Aligned_cols=105 Identities=10% Similarity=0.013 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccC
Q 043290 286 VAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCG 365 (430)
Q Consensus 286 ~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG 365 (430)
.+.-.++++.|++.+..+|...+-. .-+|+.|.+..+.+++=+ |+++ .=...|
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym---------------~IL~~~~l~~~~~~~INi----------HpSl--LP~frG 219 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYM---------------QILPPQLCREYAHQVINI----------HHSF--LPSFVG 219 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCC---------------SCCCTTHHHHTTTCEEEE----------ESSC--TTSSCS
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhh---------------hhcCHHHHhhhhCCeEEe----------Cccc--ccCCCC
Confidence 3444568888888888888887765 347888877766543222 2222 122458
Q ss_pred chhHHHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 366 WNSILESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 366 ~~s~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
.+.+..|+.+|+...++-++. +..+.+.-+.+. -+.+.. .-|.++|.+.+.+
T Consensus 220 ~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~-------~dt~~~L~~r~~~ 273 (302)
T 3o1l_A 220 AKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQD---VVRVSH-------RDSIENMVRFGRD 273 (302)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCT-------TCCHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEEE---EEecCC-------CCCHHHHHHHHHH
Confidence 999999999999999988654 333333333222 122222 4577777766654
No 139
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=30.71 E-value=1.3e+02 Score=23.83 Aligned_cols=31 Identities=23% Similarity=0.115 Sum_probs=15.2
Q ss_pred EEEEeecCCccCCHHHHHHHHHHHHhCCCcEEE
Q 043290 273 VVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLW 305 (430)
Q Consensus 273 vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw 305 (430)
.|-|-+||.. |-...++....|+..|.++-.
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev 35 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEK 35 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEE
Confidence 3444455522 334455555566666655433
No 140
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=30.68 E-value=53 Score=24.93 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=25.7
Q ss_pred EEEEE-cCC--CCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 5 ELIFV-PSP--GIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~-~~p--~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+++|+ ..+ ........+.+|...++.||+ |+++-+.
T Consensus 17 kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~e--V~vFf~~ 55 (134)
T 3mc3_A 17 XILIVVTHGPEDLDRTYAPLFMASISASMEYE--TSVFFMI 55 (134)
T ss_dssp EEEEEECCCGGGTHHHHHHHHHHHHHHHTTCE--EEEEECT
T ss_pred eEEEEEccCCCCHHHHHHHHHHHHHHHHCCCC--EEEEEEe
Confidence 34444 444 456778889999999999999 6666654
No 141
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=30.61 E-value=2.1e+02 Score=24.96 Aligned_cols=101 Identities=12% Similarity=0.050 Sum_probs=62.8
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhH
Q 043290 290 KEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSI 369 (430)
Q Consensus 290 ~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~ 369 (430)
.++++.|++.+..+|...+-. .-+|+.|.+..+.+++=+ |+++ .=...|.+.+
T Consensus 155 ~~~~~~l~~~~~Dlivlagym---------------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~ 207 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYM---------------QILSDDLSAFLSGRCINI----------HHSF--LPGFKGAKPY 207 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCC---------------SCCCHHHHHHHTTSEEEE----------ESSC--TTTTCSSCHH
T ss_pred HHHHHHHHHhCCCEEEhhhhh---------------hhcCHHHHhhccCCeEEE----------Cccc--ccCCCCchHH
Confidence 457888888888888887665 357888887766543221 2221 1123589999
Q ss_pred HHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 370 LESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 370 ~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
..|+.+|+...++-++. +..+.+.-+.+. -+.+.. .-|.++|.+.+.+
T Consensus 208 ~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q~---~v~i~~-------~dt~~~L~~r~~~ 257 (287)
T 3nrb_A 208 HQAHTRGVKLIGATAHFVTADLDEGPIIAQD---VEHVSH-------RDSAEDLVRKGRD 257 (287)
T ss_dssp HHHHHHTCSEEEEEEEECCSSSSCCCEEEEE---EEECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEEEEECCCCcCCCEEEEE---EEecCC-------CCCHHHHHHHHHH
Confidence 99999999999988654 333333333222 122222 4577777766654
No 142
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=30.53 E-value=1.2e+02 Score=24.15 Aligned_cols=31 Identities=23% Similarity=0.147 Sum_probs=15.4
Q ss_pred EEEEeecCCccCCHHHHHHHHHHHHhCCCcEEE
Q 043290 273 VVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLW 305 (430)
Q Consensus 273 vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw 305 (430)
.|-|-+||.. |-...++....|+..|.++-.
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev 44 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHV 44 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEE
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEE
Confidence 3444455522 334445555566666665433
No 143
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=30.34 E-value=27 Score=30.15 Aligned_cols=28 Identities=18% Similarity=0.309 Sum_probs=23.9
Q ss_pred cCceeEEEeccCchhHHHHHHh---CCceeecc
Q 043290 354 HKAIGGFVSHCGWNSILESLWY---GVPIATWP 383 (430)
Q Consensus 354 ~~~~~~~itHgG~~s~~eal~~---GvP~v~~P 383 (430)
.+++ +|+=||-||+++++.. ++|+++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn 71 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFK 71 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEE
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEE
Confidence 3455 9999999999999877 88888886
No 144
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=30.29 E-value=63 Score=25.49 Aligned_cols=27 Identities=22% Similarity=0.273 Sum_probs=21.7
Q ss_pred EEEEeecCCccCCHHHHHHHHHHHHhC
Q 043290 273 VVFLCFGSSGSFDVAQVKEIAIGLERS 299 (430)
Q Consensus 273 vVyvsfGS~~~~~~~~~~~~~~al~~~ 299 (430)
+.|+|+||......+.++..++.|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 579999998765667788888888775
No 145
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=30.06 E-value=2.5e+02 Score=23.63 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=23.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
++++++-++.| ==.++|++|+++|++ |.+..
T Consensus 9 k~vlVTGas~G---IG~aia~~la~~G~~--V~~~~ 39 (259)
T 3edm_A 9 RTIVVAGAGRD---IGRACAIRFAQEGAN--VVLTY 39 (259)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCE--EEEEc
Confidence 57777776654 236899999999988 76664
No 146
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=30.05 E-value=1.8e+02 Score=27.31 Aligned_cols=39 Identities=28% Similarity=0.510 Sum_probs=33.5
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCC
Q 043290 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVA 46 (430)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~ 46 (430)
+++..-|+.|--.-.+.+|...+.+|.. |.+++.+....
T Consensus 200 iiIaG~pG~GKTtlal~ia~~~a~~g~~--vl~fSlEms~~ 238 (444)
T 3bgw_A 200 VLIAARPSMGKTAFALKQAKNMSDNDDV--VNLHSLEMGKK 238 (444)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHTTCE--EEEECSSSCTT
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHcCCE--EEEEECCCCHH
Confidence 7788889999999999999999999966 88999875444
No 147
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=30.02 E-value=80 Score=26.89 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCCCC-----------HHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIGH-----------LVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH-----------~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|..+||+++.....+. ..=++.-...|.+.|++ |+++++.
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~--V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFE--VDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCE--EEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCE--EEEEeCC
Confidence 5555788888764332 24566777888999977 9999964
No 148
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=29.90 E-value=2.5e+02 Score=23.69 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
+.|+++++-++.| ==.++|++|+++|++ |.+..
T Consensus 24 ~~k~vlITGas~g---IG~~~a~~l~~~G~~--v~~~~ 56 (269)
T 3gk3_A 24 AKRVAFVTGGMGG---LGAAISRRLHDAGMA--VAVSH 56 (269)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHTTTCE--EEEEE
T ss_pred cCCEEEEECCCch---HHHHHHHHHHHCCCE--EEEEc
Confidence 3457777766542 236789999999987 76665
No 149
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=29.88 E-value=2.1e+02 Score=24.94 Aligned_cols=102 Identities=11% Similarity=0.066 Sum_probs=63.3
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchh
Q 043290 289 VKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNS 368 (430)
Q Consensus 289 ~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s 368 (430)
-.++++.|++.+..+|...+.. .-+|+.|.+..+.+++=+ |+++ .=...|.+.
T Consensus 155 ~~~~~~~l~~~~~Dlivlagy~---------------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p 207 (288)
T 3obi_A 155 EAAITALIAQTHTDLVVLARYM---------------QILSDEMSARLAGRCINI----------HHSF--LPGFKGAKP 207 (288)
T ss_dssp HHHHHHHHHHHTCCEEEESSCC---------------SCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCH
T ss_pred HHHHHHHHHhcCCCEEEhhhhh---------------hhCCHHHHhhhcCCeEEe----------Cccc--ccCCCCchH
Confidence 3458888888888888887765 347888887766543222 1221 112458999
Q ss_pred HHHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 369 ILESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 369 ~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
+..|+.+|+...++-++. +..+.+.-+.+. -+.+.. .-|.++|.+.+.+
T Consensus 208 ~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~~-------~dt~~~L~~r~~~ 258 (288)
T 3obi_A 208 YHQAFDRGVKLIGATAHYVTSALDEGPIIDQD---VERISH-------RDTPADLVRKGRD 258 (288)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEEECCCCcCCCeEEEE---EEecCC-------CCCHHHHHHHHHH
Confidence 999999999999888654 333333333222 122222 4577777766654
No 150
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=29.71 E-value=42 Score=24.40 Aligned_cols=40 Identities=25% Similarity=0.429 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCC-CCCCHHHHHHHHHHHHhC-CC-CeEEEEEecC
Q 043290 1 MKKAELIFVPSP-GIGHLVSTLEFAKHLTDR-DD-RISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p-~~GH~~P~l~La~~L~~r-GH-~v~Vt~~~~~ 42 (430)
|+|.=|++...| +.......+.+|..+++. || + |+++-..
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~--v~vff~~ 43 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLD--LRLFLMS 43 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCE--EEEEECG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCcc--EEEEEEc
Confidence 665323333322 235567779999999999 99 8 6666644
No 151
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=29.24 E-value=61 Score=24.74 Aligned_cols=39 Identities=21% Similarity=0.182 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCCCCHHHH--HHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIGHLVST--LEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~--l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|||. ..++..+-+|+.... +.+|..+++.||+ |+++-..
T Consensus 5 Mkk~-~ivv~~~P~g~~~~~~al~~a~a~~a~~~~--v~Vff~~ 45 (136)
T 2hy5_B 5 VKKF-MYLNRKAPYGTIYAWEALEVVLIGAAFDQD--VCVLFLD 45 (136)
T ss_dssp CCEE-EEEECSCTTTSSHHHHHHHHHHHHGGGCCE--EEEEECG
T ss_pred hhEE-EEEEeCCCCCcHHHHHHHHHHHHHHhCCCC--EEEEEEh
Confidence 5543 334455556765555 6679999999999 5555533
No 152
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.94 E-value=2.6e+02 Score=24.49 Aligned_cols=102 Identities=12% Similarity=0.006 Sum_probs=63.3
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchh
Q 043290 289 VKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNS 368 (430)
Q Consensus 289 ~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s 368 (430)
-.++++.|++.+..++...+.. .-+|+.|.+..+.+++=+ |++. .=...|.+.
T Consensus 160 ~~~~~~~l~~~~~Dlivla~y~---------------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p 212 (292)
T 3lou_A 160 EAQWLDVFETSGAELVILARYM---------------QVLSPEASARLANRAINI----------HHSF--LPGFKGAKP 212 (292)
T ss_dssp HHHHHHHHHHHTCSEEEESSCC---------------SCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCH
T ss_pred HHHHHHHHHHhCCCEEEecCch---------------hhCCHHHHhhhcCCeEEe----------CCCc--CcCCCCccH
Confidence 3458888888888888887665 347888887766543322 2222 223458999
Q ss_pred HHHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 369 ILESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 369 ~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
+..|+.+|+...++-++. +..+.+.-+.+. -+.+.. .-|.++|.+.+.+
T Consensus 213 ~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q~---~v~i~~-------~dt~~~L~~r~~~ 263 (292)
T 3lou_A 213 YHQAHARGVKLIGATAHFVTDDLDEGPIIEQV---VERVDH-------SYRPEQLLAVGRD 263 (292)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEEcCCCcCCCEEEEE---EEEcCC-------CCCHHHHHHHHHH
Confidence 999999999999988654 333333333222 122222 4577777766654
No 153
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=28.60 E-value=61 Score=26.02 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|++++|++. ++.|-+ -..|+++|.++||+ |+.+.-
T Consensus 1 M~~~~ilVt--GatG~i--G~~l~~~l~~~g~~--V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQT--GLTTLAQAVQAGYE--VTVLVR 35 (206)
T ss_dssp CCCCEEEEE--STTSHH--HHHHHHHHHHTTCE--EEEEES
T ss_pred CCCCEEEEE--cCCcHH--HHHHHHHHHHCCCe--EEEEEe
Confidence 665556554 555644 46788999999988 777763
No 154
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=28.59 E-value=69 Score=28.78 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=21.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+++||+|+ |--+-...+.++|.++||+ |..+.
T Consensus 20 ~~~mrIvf~-----G~~~fa~~~L~~L~~~~~~--i~~Vv 52 (329)
T 2bw0_A 20 FQSMKIAVI-----GQSLFGQEVYCHLRKEGHE--VVGVF 52 (329)
T ss_dssp -CCCEEEEE-----CCHHHHHHHHHHHHHTTCE--EEEEE
T ss_pred CCCCEEEEE-----cCcHHHHHHHHHHHHCCCe--EEEEE
Confidence 556899999 3223334567889999998 44443
No 155
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=28.48 E-value=2.2e+02 Score=22.52 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=22.0
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLR 308 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~ 308 (430)
+.|-|-.||.. |-...++....|+..|..+-..+-
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~ 40 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVV 40 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE
Confidence 35666677733 445567777788888876544443
No 156
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=28.14 E-value=2.1e+02 Score=22.79 Aligned_cols=34 Identities=21% Similarity=0.121 Sum_probs=18.4
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEE
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~ 307 (430)
|.|-|-+||. -|-+..++....|+..|.++-..+
T Consensus 12 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V 45 (170)
T 1xmp_A 12 SLVGVIMGST--SDWETMKYACDILDELNIPYEKKV 45 (170)
T ss_dssp CSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4555556662 234445566666666666644333
No 157
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=27.99 E-value=68 Score=27.88 Aligned_cols=40 Identities=18% Similarity=0.330 Sum_probs=28.9
Q ss_pred CCCcEEEEEc--CCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVP--SPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~--~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|+.++++.+. -++-|--.-...||..|+++|++ |.++-..
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~--VlliD~D 42 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAK--VAVIDLD 42 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCc--EEEEECC
Confidence 5544455554 36789999999999999999988 7777654
No 158
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=27.92 E-value=2.6e+02 Score=23.23 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=22.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|.| .++++-++.| ==.++|++|+++|++ |.++.
T Consensus 1 m~k--~vlVTGas~g---IG~~ia~~l~~~G~~--V~~~~ 33 (247)
T 3dii_A 1 MNR--GVIVTGGGHG---IGKQICLDFLEAGDK--VCFID 33 (247)
T ss_dssp -CC--EEEEESTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CCC--EEEEECCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 444 6777766543 346789999999988 76665
No 159
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=27.83 E-value=78 Score=26.31 Aligned_cols=45 Identities=20% Similarity=0.180 Sum_probs=29.6
Q ss_pred hHHHHHHHhhcc-CCCCceEEEEcCCcchHHHHHHhcCCceEEEec
Q 043290 97 NVKNIVSSRANS-GSLQVTGLVLDFFCVSMVDIAKELSLPSYIFLT 141 (430)
Q Consensus 97 ~~~~~l~~~~~~-~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~ 141 (430)
.++.+++...+. ....+.+||+|.-...+...|+++|||+..+.+
T Consensus 15 nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 15 NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 344555544321 123678899986555677899999999776644
No 160
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=27.81 E-value=1.8e+02 Score=24.10 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=61.4
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhH
Q 043290 290 KEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSI 369 (430)
Q Consensus 290 ~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~ 369 (430)
.++.+.|+..+..++.+.+.. .-+|+.|.+..+.+++=+ |+++ .=...|...+
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~---------------~il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi 128 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYM---------------RLLSGRFIAPYEGRILNI----------HPSL--LPLFPGLHTH 128 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCC---------------SCCCHHHHGGGTTCEEEE----------ESSC--TTSSCSSCHH
T ss_pred HHHHHHHHhcCCCEEEEeccc---------------cCcCHHHHhhccCCeEEE----------CCcc--ccCCCChhHH
Confidence 468888888888888887765 347887776655432211 3332 2234588999
Q ss_pred HHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 370 LESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 370 ~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
..|+.+|+...++-++. +..+.+.-+.+. - +.+.. .-|.++|.+.+.+
T Consensus 129 ~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~-------~dt~~~L~~r~~~ 178 (209)
T 4ds3_A 129 QRALDAGMKLAGCTVHLVTEGMDEGPILAQA-A--VPVLD-------GDTAETLAARVLK 178 (209)
T ss_dssp HHHHHTTCSEEEEEEEECCC--CCCCEEEEE-E--EECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEEEEEcCCCCCCCeEEEE-E--EecCC-------CCCHHHHHHHHHH
Confidence 99999999998888654 333444333322 1 22222 3466666665543
No 161
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=27.79 E-value=1.3e+02 Score=24.01 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=19.9
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEE
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~ 307 (430)
.|.|-|=+||.+ |-...++....|+..|.++-..+
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V 46 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKV 46 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEE
Confidence 345666667633 34445666666777766654333
No 162
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=27.67 E-value=57 Score=28.91 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
=|++|+++..+ ....+++++.++||+ |.++.+.
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~--v~~~~~~ 33 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFE--TIAFGSS 33 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCC--EEEESCG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCE--EEEEECC
Confidence 03578888776 567899999999988 7777654
No 163
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=27.44 E-value=3.2e+02 Score=24.10 Aligned_cols=16 Identities=19% Similarity=0.192 Sum_probs=13.6
Q ss_pred ccCHhHHHHHHHHhhC
Q 043290 415 LVMACDIESAVRCLMD 430 (430)
Q Consensus 415 ~~~~~~l~~ai~~vl~ 430 (430)
.++++.|.++|+++|.
T Consensus 308 gl~~~~I~~~i~~~l~ 323 (324)
T 1w85_B 308 LPNFKDVIETAKKVMN 323 (324)
T ss_dssp SCCHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHhh
Confidence 5789999999998874
No 164
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=27.42 E-value=64 Score=26.87 Aligned_cols=38 Identities=13% Similarity=0.006 Sum_probs=33.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+.+|++.+.++-.|-....-++..|..+|.+ |..+...
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~--Vi~LG~~ 129 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQ--IVDLGVD 129 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCE--EEECCSS
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCe--EEEcCCC
Confidence 4689999999999999999999999999977 7766543
No 165
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=27.32 E-value=2.8e+02 Score=23.44 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=23.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
.|+++++-++.| ==.++|++|+++|++ |.+..
T Consensus 27 ~k~~lVTGas~G---IG~aia~~la~~G~~--Vv~~~ 58 (267)
T 3u5t_A 27 NKVAIVTGASRG---IGAAIAARLASDGFT--VVINY 58 (267)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHHTCE--EEEEE
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCE--EEEEc
Confidence 457777776653 346889999999988 76654
No 166
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.29 E-value=71 Score=26.67 Aligned_cols=43 Identities=12% Similarity=0.227 Sum_probs=0.0
Q ss_pred hHHHHHHHhhccCCCCceEEEEcCCcchHHHHHHhcCCceEEE
Q 043290 97 NVKNIVSSRANSGSLQVTGLVLDFFCVSMVDIAKELSLPSYIF 139 (430)
Q Consensus 97 ~~~~~l~~~~~~~~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~ 139 (430)
.++.+++...+.....+.+||+|.--..+...|+++|||++.+
T Consensus 18 nl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~ 60 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHII 60 (215)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEe
No 167
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=27.23 E-value=2.9e+02 Score=23.44 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|-+.++++++-++.| =-.++|++|+++|++ |.++.
T Consensus 1 Ml~~k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~ 35 (264)
T 3tfo_A 1 MVMDKVILITGASGG---IGEGIARELGVAGAK--ILLGA 35 (264)
T ss_dssp CCTTCEEEESSTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CCCCCEEEEeCCccH---HHHHHHHHHHHCCCE--EEEEE
Confidence 333457777776643 236889999999988 76665
No 168
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=27.19 E-value=2.8e+02 Score=24.12 Aligned_cols=102 Identities=12% Similarity=0.081 Sum_probs=62.7
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchh
Q 043290 289 VKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNS 368 (430)
Q Consensus 289 ~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s 368 (430)
-.++++.|++.+..++...+.. .-+|+.|.+..+.+++=+ |+++ .=...|.+.
T Consensus 155 ~~~~~~~l~~~~~Dlivla~y~---------------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p 207 (286)
T 3n0v_A 155 ERKVLQVIEETGAELVILARYM---------------QVLSPELCRRLDGWAINI----------HHSL--LPGFKGAKP 207 (286)
T ss_dssp HHHHHHHHHHHTCSEEEESSCC---------------SCCCHHHHHHTTTSEEEE----------EECS--STTCCCSCH
T ss_pred HHHHHHHHHhcCCCEEEecccc---------------cccCHHHHhhhcCCeEEe----------cccc--ccCCCCccH
Confidence 3458888888888888887765 347888877766543221 1221 112458999
Q ss_pred HHHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 369 ILESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 369 ~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
+..|+.+|+...++-++. +..+.+.-+.+. -+.+.. .-|.++|.+.+.+
T Consensus 208 ~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q~---~~~i~~-------~dt~~~L~~r~~~ 258 (286)
T 3n0v_A 208 YHQAYNKGVKMVGATAHYINNDLDEGPIIAQG---VEVVDH-------SHYPEDLIAKGRD 258 (286)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEEcCCCCCCceeEEE---EEEcCC-------CCCHHHHHHHHHH
Confidence 999999999999988654 333333332222 122222 4577777766654
No 169
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=27.08 E-value=2.1e+02 Score=25.23 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=22.1
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
++++++-.+.| =-..+|++|+++|++ |....
T Consensus 6 k~vlVTGas~G---IG~aia~~L~~~G~~--V~~~~ 36 (324)
T 3u9l_A 6 KIILITGASSG---FGRLTAEALAGAGHR--VYASM 36 (324)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCE--EEEec
Confidence 47777766654 346899999999988 54443
No 170
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=27.06 E-value=2.8e+02 Score=23.24 Aligned_cols=31 Identities=13% Similarity=0.291 Sum_probs=22.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
++++++-++.| ==.++|++|+++|++ |.++.
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~--V~~~~ 37 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGAR--VVITG 37 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 46777766553 346889999999988 76655
No 171
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=26.86 E-value=65 Score=23.93 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
+.+||+++ + .|.+- ..+++.|.++||+ |+++..
T Consensus 3 ~~m~i~Ii--G-~G~iG--~~~a~~L~~~g~~--v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIA--G-IGRVG--YTLAKSLSEKGHD--IVLIDI 35 (140)
T ss_dssp --CEEEEE--C-CSHHH--HHHHHHHHHTTCE--EEEEES
T ss_pred CCCEEEEE--C-CCHHH--HHHHHHHHhCCCe--EEEEEC
Confidence 34578877 3 37664 4678899999988 877764
No 172
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=26.83 E-value=53 Score=25.32 Aligned_cols=36 Identities=19% Similarity=0.038 Sum_probs=28.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
-..++..+..-.+.+.+.+|...++.|++ |+++.+-
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~g~e--V~iF~t~ 45 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAASGYE--VNLFFTF 45 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHTTCE--EEEEECH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcCCc--EEEEEeh
Confidence 35555556677888999999999999988 7777764
No 173
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=26.70 E-value=31 Score=31.20 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|++++|+++=.+..| ..+|..|+++||+ |+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~--V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQS--VLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCE--EEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCE--EEEEeC
Confidence 667789999665555 3478889999998 887763
No 174
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=26.59 E-value=2.5e+02 Score=23.12 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=62.3
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhH
Q 043290 290 KEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSI 369 (430)
Q Consensus 290 ~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~ 369 (430)
.++++.++..+..++...+.. .-+|+.|.+..+..++=+ |+++ .=-..|.+.+
T Consensus 72 ~~~~~~l~~~~~Dliv~a~y~---------------~il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi 124 (212)
T 3av3_A 72 SEILRELKGRQIDWIALAGYM---------------RLIGPTLLSAYEGKIVNI----------HPSL--LPAFPGKDAI 124 (212)
T ss_dssp HHHHHHHHHTTCCEEEESSCC---------------SCCCHHHHHHTTTCEEEE----------ESSC--TTSSCSTTHH
T ss_pred HHHHHHHHhcCCCEEEEchhh---------------hhCCHHHHhhhcCCEEEE----------ecCc--CCCCCCcCHH
Confidence 358888888888888887655 347888876655432211 2332 2234588999
Q ss_pred HHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 370 LESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 370 ~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
..|+.+|....++-++. +..+.+.-+.+. - +.+.. .-|.++|.+.+.+
T Consensus 125 ~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~-------~dt~~~L~~r~~~ 174 (212)
T 3av3_A 125 GQAYRAGVSETGVTVHYVDEGMDTGPVIAQR-V--VPIVP-------GEPIEALEERIHQ 174 (212)
T ss_dssp HHHHHHTCSEEEEEEEECCSSSSCSCEEEEE-E--EECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEEEEECCCCCCCCEEEEE-E--EecCC-------CCCHHHHHHHHHH
Confidence 99999999998888644 344444333332 1 22222 4567777665543
No 175
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=26.57 E-value=53 Score=30.06 Aligned_cols=38 Identities=13% Similarity=0.216 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCCC-C---HHHHHHHHHHH-HhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIG-H---LVSTLEFAKHL-TDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~G-H---~~P~l~La~~L-~~rGH~v~Vt~~~ 40 (430)
|+|+||+++.-+-.+ | +.....++++| .++||+ |+.+.
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~--v~~i~ 43 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYE--IIVFA 43 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEE--EEEEE
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcE--EEEEE
Confidence 888899999765444 2 34578899999 999988 66665
No 176
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=26.47 E-value=1.3e+02 Score=25.36 Aligned_cols=31 Identities=19% Similarity=0.003 Sum_probs=23.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
++++++-++.| =-.++|++|+++|++ |.++.
T Consensus 8 k~vlVTGas~G---IG~aia~~l~~~G~~--V~~~~ 38 (252)
T 3h7a_A 8 ATVAVIGAGDY---IGAEIAKKFAAEGFT--VFAGR 38 (252)
T ss_dssp CEEEEECCSSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCE--EEEEe
Confidence 57777766653 346899999999987 76665
No 177
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=26.36 E-value=2.2e+02 Score=22.37 Aligned_cols=92 Identities=13% Similarity=0.018 Sum_probs=51.2
Q ss_pred HhHHHHHhhcCCCCcEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhc
Q 043290 258 YQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIK 337 (430)
Q Consensus 258 ~~~l~~~l~~~~~~~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (430)
-+++.+.+.+. +.+++++.|+ +......+...|.+.|.++....... ..+.
T Consensus 29 l~~~~~~i~~a--~~I~i~G~G~----S~~~a~~~~~~l~~~g~~~~~~~~~~-------------------~~~~---- 79 (187)
T 3sho_A 29 IEAAVEAICRA--DHVIVVGMGF----SAAVAVFLGHGLNSLGIRTTVLTEGG-------------------STLT---- 79 (187)
T ss_dssp HHHHHHHHHHC--SEEEEECCGG----GHHHHHHHHHHHHHTTCCEEEECCCT-------------------HHHH----
T ss_pred HHHHHHHHHhC--CEEEEEecCc----hHHHHHHHHHHHHhcCCCEEEecCCc-------------------hhHH----
Confidence 34555666663 4677777776 33344556666677788776653111 1110
Q ss_pred CceEEEeccchhhhhccCceeEEEeccCch-h----HHHHHHhCCceeecccccc
Q 043290 338 GRGMICGWVPQVEILAHKAIGGFVSHCGWN-S----ILESLWYGVPIATWPIYAE 387 (430)
Q Consensus 338 ~~~~v~~~~pq~~iL~~~~~~~~itHgG~~-s----~~eal~~GvP~v~~P~~~D 387 (430)
-+...+...++-.+|++.|.. . +..|-..|+++|++--..+
T Consensus 80 ---------~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 80 ---------ITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp ---------HHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred ---------HHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 111223344565688998854 2 2334456999988765443
No 178
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=26.32 E-value=67 Score=28.62 Aligned_cols=50 Identities=8% Similarity=0.080 Sum_probs=31.0
Q ss_pred cHhHHHHHhhcCCCCcEEEEeecCCc---cCCHHHHHHHHHHHHhCCCcEEEEEec
Q 043290 257 QYQKIFQWLDDLAESSVVFLCFGSSG---SFDVAQVKEIAIGLERSGYNFLWSLRV 309 (430)
Q Consensus 257 ~~~~l~~~l~~~~~~~vVyvsfGS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~ 309 (430)
..+++..+++... ++-|-+|+.. ..+.+.+..+.+.+++.+.++++=.+.
T Consensus 125 a~~el~~~~~~~g---~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 125 AVKEMERCVKELG---FPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHHHTSC---CSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHccC---CeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 3466777775432 3333344432 344566888999999999988775543
No 179
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=26.28 E-value=1.2e+02 Score=29.69 Aligned_cols=27 Identities=19% Similarity=0.334 Sum_probs=22.9
Q ss_pred eeEEEeccC------chhHHHHHHhCCceeecc
Q 043290 357 IGGFVSHCG------WNSILESLWYGVPIATWP 383 (430)
Q Consensus 357 ~~~~itHgG------~~s~~eal~~GvP~v~~P 383 (430)
.+++++|.| .+++.+|-+.++|||++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 445999998 668999999999999973
No 180
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=26.26 E-value=76 Score=27.52 Aligned_cols=40 Identities=20% Similarity=0.274 Sum_probs=31.9
Q ss_pred CCCcEEEEEcCC---CCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSP---GIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p---~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|..+|++|++-+ +-|-=.-.-.|++.|.+||.+ ||...-.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~--Vt~~K~D 62 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLH--VTSIKID 62 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCC--EEEEEEE
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCc--ceeeecc
Confidence 667789999987 556667788999999999977 8887744
No 181
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=26.25 E-value=32 Score=30.89 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|+.+||+++=.++.| ..+|..|++.||+ |+++..
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~--V~~~~r 34 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEA--INVLAR 34 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCC--EEEECC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCE--EEEEEC
Confidence 777789999666655 4578889999999 888874
No 182
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=26.04 E-value=43 Score=26.05 Aligned_cols=28 Identities=14% Similarity=0.094 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 13 GIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
..--+--.+.++..|.++||+ |++..++
T Consensus 18 ~Pvq~p~~lYl~~~Lk~~G~~--v~VA~np 45 (157)
T 1kjn_A 18 SPVQIPLAIYTSHKLKKKGFR--VTVTANP 45 (157)
T ss_dssp STTHHHHHHHHHHHHHHTTCE--EEEEECH
T ss_pred CcchhhHHHHHHHHHHhcCCe--eEEecCH
Confidence 334555678999999999999 9899976
No 183
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=25.94 E-value=2.7e+02 Score=23.91 Aligned_cols=31 Identities=3% Similarity=0.114 Sum_probs=22.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+++++-++.| ==.++|++|+++|++ |.++.
T Consensus 48 k~vlVTGas~G---IG~aia~~la~~G~~--V~~~~ 78 (291)
T 3ijr_A 48 KNVLITGGDSG---IGRAVSIAFAKEGAN--IAIAY 78 (291)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCE--EEEEe
Confidence 57777766654 246889999999988 76665
No 184
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=25.68 E-value=1.9e+02 Score=26.43 Aligned_cols=28 Identities=7% Similarity=0.065 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEEecCC
Q 043290 15 GHLVSTLEFAKHLTDRDDRISVTLLSMKL 43 (430)
Q Consensus 15 GH~~P~l~La~~L~~rGH~v~Vt~~~~~~ 43 (430)
-+..-....++.|.++||+ +|.+++.+.
T Consensus 122 D~~~~g~~a~~~L~~~G~r-~I~~i~~~~ 149 (412)
T 4fe7_A 122 DNYALVESAFLHLKEKGVN-RFAFYGLPE 149 (412)
T ss_dssp CHHHHHHHHHHHHHHTTCC-EEEEECCCT
T ss_pred CHHHHHHHHHHHHHHcCCc-eEEEecccc
Confidence 3556777889999999997 466777553
No 185
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=25.53 E-value=3.8e+02 Score=24.25 Aligned_cols=39 Identities=8% Similarity=0.066 Sum_probs=33.0
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCC
Q 043290 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVA 46 (430)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~ 46 (430)
++++--|+.|-..=.+.++..++.+|.. |.|++++....
T Consensus 77 i~I~G~pGsGKTtlal~la~~~~~~g~~--vlyi~~E~s~~ 115 (366)
T 1xp8_A 77 TEIYGPESGGKTTLALAIVAQAQKAGGT--CAFIDAEHALD 115 (366)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCC--EEEEESSCCCC
T ss_pred EEEEcCCCCChHHHHHHHHHHHHHCCCe--EEEEECCCChh
Confidence 5677788999999999999999999987 88999885444
No 186
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=25.45 E-value=2.1e+02 Score=23.79 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=61.8
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhH
Q 043290 290 KEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSI 369 (430)
Q Consensus 290 ~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~ 369 (430)
.++.+.|++.+..++...+.. .-+|+.|.+..+.+++=+ |+++ .=-..|...+
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~---------------~IL~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi 124 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFM---------------SILPEKFVTDWHHKIINI----------HPSL--LPSFKGLNAQ 124 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCC---------------SCCCHHHHHHTTTSEEEE----------ESSC--TTTTCSSCHH
T ss_pred HHHHHHHHHhCCCEEEEeCCc---------------eEeCHHHHhhccCCeEEE----------Cccc--ccCCCCccHH
Confidence 567778888888888887765 347888877665433211 2222 2234588999
Q ss_pred HHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 370 LESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 370 ~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
..|+.+|+...++-++. +..+.+.-+.+. -+.+.. .-|.++|.+.+.+
T Consensus 125 ~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~~-------~dt~~~L~~rl~~ 174 (215)
T 3kcq_A 125 EQAYKAGVKIAGCTLHYVYQELDAGPIIMQA---AVPVLR-------EDTAESLASRILA 174 (215)
T ss_dssp HHHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEEEEEcCCCCCCCEEEEE---EeecCC-------CCCHHHHHHHHHH
Confidence 99999999998888654 333444333332 122322 3467777665543
No 187
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=25.27 E-value=3.1e+02 Score=23.25 Aligned_cols=86 Identities=12% Similarity=0.117 Sum_probs=48.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCCCCCCCCCCCCCCCH
Q 043290 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLPPVDPPLPDVLKKSP 83 (430)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 83 (430)
-|+++++-++.| ==.++|++|+++|.+ |.+..-. ....+...+.+...+....++..+-. +.
T Consensus 7 gKvalVTGas~G---IG~aiA~~la~~Ga~--Vv~~~~~---~~~~~~~~~~i~~~g~~~~~~~~Dvt----------~~ 68 (254)
T 4fn4_A 7 NKVVIVTGAGSG---IGRAIAKKFALNDSI--VVAVELL---EDRLNQIVQELRGMGKEVLGVKADVS----------KK 68 (254)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCE--EEEEESC---HHHHHHHHHHHHHTTCCEEEEECCTT----------SH
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHcCCE--EEEEECC---HHHHHHHHHHHHhcCCcEEEEEccCC----------CH
Confidence 368899888776 246789999999977 6665422 11122223333333444555544321 11
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhccCCCCceEEEEcC
Q 043290 84 EYFLSLVVESHLPNVKNIVSSRANSGSLQVTGLVLDF 120 (430)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vV~D~ 120 (430)
......+++..+++ .+.|++|...
T Consensus 69 --------~~v~~~~~~~~~~~-----G~iDiLVNNA 92 (254)
T 4fn4_A 69 --------KDVEEFVRRTFETY-----SRIDVLCNNA 92 (254)
T ss_dssp --------HHHHHHHHHHHHHH-----SCCCEEEECC
T ss_pred --------HHHHHHHHHHHHHc-----CCCCEEEECC
Confidence 12333444555555 4899999875
No 188
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=25.02 E-value=2.1e+02 Score=27.59 Aligned_cols=24 Identities=4% Similarity=-0.153 Sum_probs=19.3
Q ss_pred CceEEEEcCCcchHHHHHHhcCCceEE
Q 043290 112 QVTGLVLDFFCVSMVDIAKELSLPSYI 138 (430)
Q Consensus 112 ~~D~vV~D~~~~~~~~~A~~lgiP~v~ 138 (430)
+||++|... ....+|+++|||++.
T Consensus 456 ~pDl~ig~~---~~~~~a~k~gIP~~~ 479 (533)
T 1mio_A 456 KPDMFFAGI---KEKFVIQKGGVLSKQ 479 (533)
T ss_dssp CCSEEEECH---HHHHHHHHTTCEEEE
T ss_pred CCCEEEccc---chhHHHHhcCCCEEE
Confidence 899998764 356789999999763
No 189
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=24.98 E-value=1.3e+02 Score=26.19 Aligned_cols=29 Identities=28% Similarity=0.145 Sum_probs=23.6
Q ss_pred cCceeEEEeccCchhHHHHHHh--C-Cceeeccc
Q 043290 354 HKAIGGFVSHCGWNSILESLWY--G-VPIATWPI 384 (430)
Q Consensus 354 ~~~~~~~itHgG~~s~~eal~~--G-vP~v~~P~ 384 (430)
.+++ +|+=||-||++.|... + +|++++..
T Consensus 68 ~~Dl--vIvlGGDGT~L~aa~~~~~~~PilGIN~ 99 (278)
T 1z0s_A 68 NFDF--IVSVGGDGTILRILQKLKRCPPIFGINT 99 (278)
T ss_dssp GSSE--EEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred CCCE--EEEECCCHHHHHHHHHhCCCCcEEEECC
Confidence 5666 9999999999999865 3 78888764
No 190
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=24.90 E-value=2.5e+02 Score=22.35 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=18.5
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEE
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~ 307 (430)
+.|-|-+||.+ |-...++....|+..|.++-..+
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V 41 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRV 41 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEE
Confidence 34555566632 34445666666666666654333
No 191
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=24.89 E-value=84 Score=27.03 Aligned_cols=39 Identities=10% Similarity=0.296 Sum_probs=30.0
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHHHh--CCCcEEEEEec
Q 043290 271 SSVVFLCFGSSGSFDVAQVKEIAIGLER--SGYNFLWSLRV 309 (430)
Q Consensus 271 ~~vVyvsfGS~~~~~~~~~~~~~~al~~--~~~~~vw~~~~ 309 (430)
+.+|+|+|||......+.+..+.+.+++ .++.+-|.+..
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 4699999999765555678888888876 36788888765
No 192
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=24.76 E-value=1.5e+02 Score=26.79 Aligned_cols=27 Identities=11% Similarity=-0.021 Sum_probs=20.5
Q ss_pred cCceeEEEec--cCchhHHHHHHhCCceeec
Q 043290 354 HKAIGGFVSH--CGWNSILESLWYGVPIATW 382 (430)
Q Consensus 354 ~~~~~~~itH--gG~~s~~eal~~GvP~v~~ 382 (430)
++++ +|+| .+..+..-|-..|+|.+.+
T Consensus 102 ~pD~--Vi~d~~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 102 PPDL--VVYDVFPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp CCSE--EEEESTTHHHHHHHHHHHTCCEEEE
T ss_pred CCCE--EEECchHHHHHHHHHHhhCCCEEEE
Confidence 5676 7777 5666677788899999886
No 193
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=24.63 E-value=51 Score=29.12 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+| |.|+=.+..|. .+|+.|.++||+ |+++.
T Consensus 3 M~k--IgfIGlG~MG~-----~mA~~L~~~G~~--v~v~d 33 (300)
T 3obb_A 3 MKQ--IAFIGLGHMGA-----PMATNLLKAGYL--LNVFD 33 (300)
T ss_dssp CCE--EEEECCSTTHH-----HHHHHHHHTTCE--EEEEC
T ss_pred cCE--EEEeeehHHHH-----HHHHHHHhCCCe--EEEEc
Confidence 664 99999999984 689999999998 77775
No 194
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=24.52 E-value=2.8e+02 Score=26.61 Aligned_cols=25 Identities=12% Similarity=0.086 Sum_probs=19.8
Q ss_pred CceEEEEcCCcchHHHHHHhc-------CCceEEE
Q 043290 112 QVTGLVLDFFCVSMVDIAKEL-------SLPSYIF 139 (430)
Q Consensus 112 ~~D~vV~D~~~~~~~~~A~~l-------giP~v~~ 139 (430)
++|++|.+.. +..+|+++ |||++.+
T Consensus 434 ~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 434 QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 7999998863 46778888 9998654
No 195
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=24.15 E-value=89 Score=27.89 Aligned_cols=34 Identities=9% Similarity=0.184 Sum_probs=22.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|+++||+|+-.| .-.....+.|.++||+ |..+.+
T Consensus 5 ~~~mrivf~Gt~-----~fa~~~L~~L~~~~~~--v~~Vvt 38 (318)
T 3q0i_A 5 SQSLRIVFAGTP-----DFAARHLAALLSSEHE--IIAVYT 38 (318)
T ss_dssp --CCEEEEECCS-----HHHHHHHHHHHTSSSE--EEEEEC
T ss_pred ccCCEEEEEecC-----HHHHHHHHHHHHCCCc--EEEEEc
Confidence 678899998665 3334556778888998 544443
No 196
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=24.10 E-value=90 Score=30.55 Aligned_cols=26 Identities=19% Similarity=0.345 Sum_probs=22.0
Q ss_pred eEEEeccCch------hHHHHHHhCCceeecc
Q 043290 358 GGFVSHCGWN------SILESLWYGVPIATWP 383 (430)
Q Consensus 358 ~~~itHgG~~------s~~eal~~GvP~v~~P 383 (430)
+++++|.|-| +++||-+.++|||++-
T Consensus 77 ~v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 77 GICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp EEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 3489999965 7899999999999974
No 197
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=24.10 E-value=1.9e+02 Score=23.26 Aligned_cols=36 Identities=17% Similarity=0.031 Sum_probs=24.3
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhCCCcEEEEEec
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~vw~~~~ 309 (430)
+.|-|=+||. -|-...++....|+..|.++-..+-+
T Consensus 22 ~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~S 57 (182)
T 1u11_A 22 PVVGIIMGSQ--SDWETMRHADALLTELEIPHETLIVS 57 (182)
T ss_dssp CSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEEECcH--HHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4566668873 35556778888888888886554433
No 198
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=24.08 E-value=87 Score=30.45 Aligned_cols=26 Identities=15% Similarity=0.153 Sum_probs=22.2
Q ss_pred eEEEeccCc------hhHHHHHHhCCceeecc
Q 043290 358 GGFVSHCGW------NSILESLWYGVPIATWP 383 (430)
Q Consensus 358 ~~~itHgG~------~s~~eal~~GvP~v~~P 383 (430)
+++++|.|- ++++||-+.++|||++-
T Consensus 68 ~v~~~TsGpG~~N~~~~l~~A~~~~~Pll~it 99 (563)
T 2uz1_A 68 GVALVTAGGGFTNAVTPIANAWLDRTPVLFLT 99 (563)
T ss_dssp EEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEccCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 348899986 68999999999999973
No 199
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=24.05 E-value=1.5e+02 Score=27.04 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=27.8
Q ss_pred EEEEEcC-CCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 5 ELIFVPS-PGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 5 ~i~~~~~-p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
+|++++. ++-|-..-...||..|+++|++ |-++..
T Consensus 3 ~i~~~~gkGG~GKTt~a~~la~~la~~g~~--vllvd~ 38 (374)
T 3igf_A 3 LILTFLGKSGVARTKIAIAAAKLLASQGKR--VLLAGL 38 (374)
T ss_dssp EEEEEECSBHHHHHHHHHHHHHHHHHTTCC--EEEEEC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCC--eEEEeC
Confidence 3555544 5668888899999999999988 777776
No 200
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=23.64 E-value=3e+02 Score=23.14 Aligned_cols=58 Identities=7% Similarity=0.086 Sum_probs=31.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhHHhhhhccCCCCCeEEEeCC
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMKLAVAPWVDAYAKSLTDSQPRICIIDLP 69 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 69 (430)
+.++++-++.| + -.++|++|+++|++ |.+..... . .......+.+...+.++.++..+
T Consensus 27 k~vlVTGas~g-I--G~~la~~l~~~G~~--v~i~~~r~-~-~~~~~~~~~l~~~~~~~~~~~~D 84 (267)
T 4iiu_A 27 RSVLVTGASKG-I--GRAIARQLAADGFN--IGVHYHRD-A-AGAQETLNAIVANGGNGRLLSFD 84 (267)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCE--EEEEESSC-H-HHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCE--EEEEeCCc-h-HHHHHHHHHHHhcCCceEEEEec
Confidence 36666665543 3 46899999999988 76655331 1 11112222222334567776654
No 201
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=23.62 E-value=2.1e+02 Score=20.71 Aligned_cols=47 Identities=9% Similarity=-0.064 Sum_probs=30.6
Q ss_pred hCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 375 YGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 375 ~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
..+|+|++--..|......+..+. |+--.+.+ .++.++|.++|++++
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~-g~~~~l~k-------P~~~~~l~~~i~~~l 125 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPL-AVSTWLEK-------PIDENLLILSLHRAI 125 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTT-CCCEEECS-------SCCHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhc-CCCEEEeC-------CCCHHHHHHHHHHHH
Confidence 378888877665554433133333 65544554 689999999999876
No 202
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=23.53 E-value=2.6e+02 Score=23.64 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=22.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+++++-++.| + =.++|++|+++|++ |.+..
T Consensus 19 k~~lVTGas~g-I--G~aia~~l~~~G~~--V~~~~ 49 (270)
T 3is3_A 19 KVALVTGSGRG-I--GAAVAVHLGRLGAK--VVVNY 49 (270)
T ss_dssp CEEEESCTTSH-H--HHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCE--EEEEc
Confidence 57777766542 2 46889999999988 66654
No 203
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=23.53 E-value=2.4e+02 Score=24.84 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=31.6
Q ss_pred cHhHHHHHhhcCCCCcEEEEeecCC---ccCCHHHHHHHHHHHHhCCCcEEEEEec
Q 043290 257 QYQKIFQWLDDLAESSVVFLCFGSS---GSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (430)
Q Consensus 257 ~~~~l~~~l~~~~~~~vVyvsfGS~---~~~~~~~~~~~~~al~~~~~~~vw~~~~ 309 (430)
..+++..+++. .-+++ -+|+. ...+.+.+..+.+.+++.+.++++=.+.
T Consensus 129 a~~el~~~~~~-g~~Gv---~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 129 ACKEASRAVAA-GHLGI---QIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHHH-TCCCE---EEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHHc-CCeEE---EECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 34677777743 22333 34443 2445677899999999999998776543
No 204
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=23.48 E-value=2.1e+02 Score=23.00 Aligned_cols=31 Identities=29% Similarity=0.339 Sum_probs=16.0
Q ss_pred cCchhHHHHHHh--CCceeecccccccchhHHHHh
Q 043290 364 CGWNSILESLWY--GVPIATWPIYAEQQLNAFRMV 396 (430)
Q Consensus 364 gG~~s~~eal~~--GvP~v~~P~~~DQ~~~a~rv~ 396 (430)
+|+.+.+-.+.. |+|+-++ .-|-..||+.++
T Consensus 105 ~G~dsLlSivqmP~GvpVatV--~Id~~~nAa~lA 137 (183)
T 1o4v_A 105 NGLDSLFSIVQMPGGVPVATV--AINNAKNAGILA 137 (183)
T ss_dssp TTHHHHHHHHTCCTTCCCEEC--CTTCHHHHHHHH
T ss_pred CcHHHHHHHhcCCCCCeeEEE--ecCCchHHHHHH
Confidence 344455555555 7663333 234566666554
No 205
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=23.46 E-value=3.7e+02 Score=23.41 Aligned_cols=14 Identities=7% Similarity=0.102 Sum_probs=10.6
Q ss_pred ccCHhHHHHHHHHh
Q 043290 415 LVMACDIESAVRCL 428 (430)
Q Consensus 415 ~~~~~~l~~ai~~v 428 (430)
.++++++++.++++
T Consensus 256 sl~p~el~~lv~~i 269 (285)
T 3sz8_A 256 ALPLHQLEGLLSQM 269 (285)
T ss_dssp CEEGGGHHHHHHHH
T ss_pred ccCHHHHHHHHHHH
Confidence 67888888777765
No 206
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=23.38 E-value=2.8e+02 Score=23.51 Aligned_cols=31 Identities=26% Similarity=0.229 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+++++-++.| ==.++|++|+++|++ |.+..
T Consensus 32 k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~ 62 (271)
T 3v2g_A 32 KTAFVTGGSRG---IGAAIAKRLALEGAA--VALTY 62 (271)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCE--EEEEe
Confidence 57777776653 346899999999988 76664
No 207
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=23.37 E-value=56 Score=29.89 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=26.0
Q ss_pred EEEEEcC--C-CCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 5 ELIFVPS--P-GIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~~~--p-~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
||++++. | ..|--.-...|+++|+++ |+ |++++..
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~--V~v~~~~ 39 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HE--VIVFGIH 39 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SE--EEEEEES
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CC--eEEEeec
Confidence 4777752 3 345566788999999999 99 7788754
No 208
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=23.26 E-value=2.2e+02 Score=24.39 Aligned_cols=32 Identities=9% Similarity=0.151 Sum_probs=22.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
++++++-++.| ==.++|++|+++|++ |.++.-
T Consensus 33 k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~r 64 (276)
T 3r1i_A 33 KRALITGASTG---IGKKVALAYAEAGAQ--VAVAAR 64 (276)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCE--EEEEES
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCE--EEEEeC
Confidence 46777666542 236889999999988 766653
No 209
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.04 E-value=3.4e+02 Score=22.81 Aligned_cols=31 Identities=10% Similarity=0.264 Sum_probs=23.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+++++-++.| ==.++|++|+++|++ |.+..
T Consensus 12 k~vlVTGas~g---IG~aia~~l~~~G~~--V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVGPA---LGTTLARRCAEQGAD--LVLAA 42 (264)
T ss_dssp CEEEEESCCTT---HHHHHHHHHHHTTCE--EEEEE
T ss_pred cEEEEECCCcH---HHHHHHHHHHHCcCE--EEEEe
Confidence 57788777665 346889999999988 76665
No 210
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=22.96 E-value=3.3e+02 Score=22.72 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=62.8
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhH
Q 043290 290 KEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSI 369 (430)
Q Consensus 290 ~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~ 369 (430)
.++++.|+..+..++...+.. .-+|+.|++..+..++=+ |+++ .=-..|...+
T Consensus 91 ~~~~~~l~~~~~Dliv~agy~---------------~IL~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~pi 143 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGYM---------------RLVRGPMLTAFPNRILNI----------HPSL--LPAFPGLEAQ 143 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSCC---------------SCCCHHHHHHSTTCEEEE----------ESSC--TTSSCSSCHH
T ss_pred HHHHHHHHhcCCCEEEEcChh---------------HhCCHHHHhhccCCEEEE----------ccCc--CcCCCCcCHH
Confidence 458888888888888887765 347888877665433222 2222 2223589999
Q ss_pred HHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 370 LESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 370 ~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
..|+.+|....++-++. +..+.+.-+.+. - +.+.. .-|.++|.+.+.+
T Consensus 144 ~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~-------~dt~~~L~~rl~~ 193 (229)
T 3auf_A 144 RQALEHGVKVAGCTVHFVTAGVDEGPIILQA-A--VPVLE-------GDTVEDLRRRILA 193 (229)
T ss_dssp HHHHHHTCSEEEEEEEECCSSTTCSCEEEEE-E--EECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEEEEECCCCcCCCEEEEE-E--EecCC-------CCCHHHHHHHHHH
Confidence 99999999998888644 444444443332 1 22322 4567777665543
No 211
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=22.85 E-value=1.8e+02 Score=24.54 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=23.4
Q ss_pred cEEEEEcCCCC--CCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 4 AELIFVPSPGI--GHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 4 ~~i~~~~~p~~--GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
-|+++++-.+. | + =.++|++|+++|++ |.+..
T Consensus 6 gK~alVTGaa~~~G-I--G~aiA~~la~~Ga~--Vvi~~ 39 (256)
T 4fs3_A 6 NKTYVIMGIANKRS-I--AFGVAKVLDQLGAK--LVFTY 39 (256)
T ss_dssp TCEEEEECCCSTTC-H--HHHHHHHHHHTTCE--EEEEE
T ss_pred CCEEEEECCCCCch-H--HHHHHHHHHHCCCE--EEEEE
Confidence 36888887542 3 2 37889999999988 76655
No 212
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=22.77 E-value=3.1e+02 Score=22.54 Aligned_cols=101 Identities=11% Similarity=0.074 Sum_probs=61.6
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchhH
Q 043290 290 KEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNSI 369 (430)
Q Consensus 290 ~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s~ 369 (430)
.++.+.++..+..++...+.. .-+|+.|.+..+..++=+ |+++ .=-..|...+
T Consensus 69 ~~~~~~l~~~~~Dliv~agy~---------------~il~~~~l~~~~~~~iNi----------HpSl--LP~yrG~~pi 121 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGFM---------------RILSPAFVSHYAGRLLNI----------HPSL--LPKYPGLHTH 121 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSCC---------------SCCCHHHHHHTTTSEEEE----------ESSC--TTSCCSSCHH
T ss_pred HHHHHHHHhcCCCEEEEeChh---------------hhCCHHHHhhccCCEEEE----------ccCc--ccCCCCccHH
Confidence 458888888888888887665 347887776655432211 2222 2223588999
Q ss_pred HHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 370 LESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 370 ~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
..|+.+|....++-++. +..+.+.-+.+. - +.+.. .-|.++|.+.+.+
T Consensus 122 ~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~-------~dt~~~L~~rl~~ 171 (212)
T 1jkx_A 122 RQALENGDEEHGTSVHFVTDELDGGPVILQA-K--VPVFA-------GDSEDDITARVQT 171 (212)
T ss_dssp HHHHHTTCSEEEEEEEECCSSTTCSCEEEEE-E--EECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHcCCCceEEEEEEEcccccCCCEEEEE-E--EEcCC-------CCCHHHHHHHHHH
Confidence 99999999998888644 344444333332 1 22222 4567777665543
No 213
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=22.65 E-value=2.3e+02 Score=23.80 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=22.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
+.++++-++. -+ -.++|++|+++|++ |.++.
T Consensus 8 k~vlVTGas~-gI--G~~~a~~l~~~G~~--v~~~~ 38 (264)
T 3i4f_A 8 RHALITAGTK-GL--GKQVTEKLLAKGYS--VTVTY 38 (264)
T ss_dssp CEEEETTTTS-HH--HHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEeCCCc-hh--HHHHHHHHHHCCCE--EEEEc
Confidence 5677765554 22 36899999999988 76664
No 214
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=22.63 E-value=1.1e+02 Score=21.69 Aligned_cols=46 Identities=17% Similarity=0.073 Sum_probs=30.4
Q ss_pred hCCceeecccccccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhhC
Q 043290 375 YGVPIATWPIYAEQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLMD 430 (430)
Q Consensus 375 ~GvP~v~~P~~~DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 430 (430)
..+|+|++ -. +......+..+. |+--.+.+ .++.+++.++|+.++.
T Consensus 79 ~~~~ii~~-~~-~~~~~~~~~~~~-g~~~~l~k-------p~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII-GN-PDGFAQHRKLKA-HADEYVAK-------PVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE-EC-GGGHHHHHHSTT-CCSEEEES-------SCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE-ec-CCchhHHHHHHh-CcchheeC-------CCCHHHHHHHHHHHHc
Confidence 47899988 43 334444444444 66445554 6899999999998763
No 215
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=22.53 E-value=2.5e+02 Score=23.20 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=21.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
+.++++-++.| + -.++|++|+++|++ |.++.
T Consensus 6 k~vlITGas~g-I--G~~~a~~l~~~G~~--v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGASRG-I--GFEVAHALASKGAT--VVGTA 36 (247)
T ss_dssp CEEEESSCSSH-H--HHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCE--EEEEe
Confidence 46677665542 2 36889999999988 76665
No 216
>2cg8_A Dihydroneopterin aldolase 6-hydroxymethyl-7,8- dihydropterin synthase; lyase/transferase, folate biosynthesis, pyrophosphokinase, lyase; 2.9A {Streptococcus pneumoniae}
Probab=22.33 E-value=67 Score=27.92 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=25.8
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHHHhCCCcEE
Q 043290 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFL 304 (430)
Q Consensus 272 ~vVyvsfGS~~~~~~~~~~~~~~al~~~~~~~v 304 (430)
..+|+|+||......+.++..+++|++.+.+++
T Consensus 120 ~~~~i~lGsN~gd~~~~l~~A~~~L~~~~~~~~ 152 (270)
T 2cg8_A 120 QRAFIALGSNMGDKQANLKQAIDKLRARGIHIL 152 (270)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred ceEEEecCCCCCCHHHHHHHHHHHHhccCCeeE
Confidence 479999999887677788888888888555544
No 217
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=22.32 E-value=3.4e+02 Score=25.39 Aligned_cols=25 Identities=28% Similarity=0.272 Sum_probs=20.5
Q ss_pred CceEEEEcCCcchHHHHHHhcCCceEEE
Q 043290 112 QVTGLVLDFFCVSMVDIAKELSLPSYIF 139 (430)
Q Consensus 112 ~~D~vV~D~~~~~~~~~A~~lgiP~v~~ 139 (430)
++|++|.+.. ...+|+++|||++.+
T Consensus 385 ~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 385 GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 8999998863 567899999997755
No 218
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=22.23 E-value=3.3e+02 Score=22.44 Aligned_cols=102 Identities=13% Similarity=0.120 Sum_probs=63.4
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCChhHHHhhcCceEEEeccchhhhhccCceeEEEeccCchh
Q 043290 289 VKEIAIGLERSGYNFLWSLRVSCPKDEASAHRYVTNNGVFPEGFLERIKGRGMICGWVPQVEILAHKAIGGFVSHCGWNS 368 (430)
Q Consensus 289 ~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~iL~~~~~~~~itHgG~~s 368 (430)
-.++++.|+..+..++.+.+.. .-+|+.+++..+.+++-+ |+++ .=-..|...
T Consensus 70 d~~~~~~l~~~~~Dliv~agy~---------------~Il~~~~l~~~~~~~iNi----------HpSL--LP~yrG~~p 122 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAGYM---------------RLVGPTLLGAYEGRIVNI----------HPSL--LPAFPGLHA 122 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC---------------SCCCHHHHHHHTTSEEEE----------ESSC--TTSSCSSCH
T ss_pred HHHHHHHHHhcCCCEEEEeCch---------------hhcCHHHHhhccCCeEEE----------CCcc--CCCCCCccH
Confidence 3568888999889998888765 347888877765443222 2222 223348899
Q ss_pred HHHHHHhCCceeeccccc--ccchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHH
Q 043290 369 ILESLWYGVPIATWPIYA--EQQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRC 427 (430)
Q Consensus 369 ~~eal~~GvP~v~~P~~~--DQ~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~ 427 (430)
+..|+.+|....++-++. +..+.+..+.+. - +.+.. .-|.++|.+.+.+
T Consensus 123 i~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~-~--v~I~~-------~dt~~~L~~rl~~ 173 (211)
T 3p9x_A 123 IEQAIRANVKVTGVTIHYVDEGMDTGPIIAQE-A--VSIEE-------EDTLETLTTKIQA 173 (211)
T ss_dssp HHHHHHTTCSEEEEEEEECCSSSSCSCEEEEE-E--EECCT-------TCCHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEE-E--EecCC-------CCCHHHHHHHHHH
Confidence 999999999998888644 444444433332 1 22222 3466666665543
No 219
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=22.17 E-value=54 Score=29.46 Aligned_cols=38 Identities=11% Similarity=0.222 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCCCC-----HHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 1 MKKAELIFVPSPGIGH-----LVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH-----~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|+|+||+++.-+ ++. +.....++++|.+.||+ |..+..
T Consensus 1 m~~~~v~vl~gG-~s~E~~vs~~s~~~v~~al~~~g~~--v~~i~~ 43 (343)
T 1e4e_A 1 MNRIKVAILFGG-CSEEHDVSVKSAIEIAANINKEKYE--PLYIGI 43 (343)
T ss_dssp -CCEEEEEEEEC-SSTTHHHHHHHHHHHHHHSCTTTEE--EEEEEE
T ss_pred CCCcEEEEEeCC-CCCCcchhHHHHHHHHHHhhhcCCE--EEEEEE
Confidence 888899998744 442 22567789999999988 666553
No 220
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=22.16 E-value=3.4e+02 Score=22.50 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=19.1
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+++.++|-.=- .-+=.+...++++|++|.|.++|..
T Consensus 5 L~v~aHPDDe~-l~~ggtia~~~~~G~~v~vv~lT~G 40 (227)
T 1uan_A 5 LVVAPHPDDGE-LGCGGTLARAKAEGLSTGILDLTRG 40 (227)
T ss_dssp EEEESSTTHHH-HHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred EEEEeCCCcHH-HhHHHHHHHHHhCCCcEEEEEEcCC
Confidence 44555553221 2222344456689999776666643
No 221
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=22.16 E-value=56 Score=27.36 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=30.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
+|+|..-++-|--.-...||..|+++|++ |.++-..
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~--VlliD~D 37 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDK--IYAVDGD 37 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSC--EEEEEEC
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCe--EEEEeCC
Confidence 48887777888999999999999999988 7777644
No 222
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=22.14 E-value=1.1e+02 Score=25.43 Aligned_cols=44 Identities=20% Similarity=0.315 Sum_probs=28.1
Q ss_pred HHHHHHHhhccC-CCCceEEEEcCCcchHHHHHHhcCCceEEEec
Q 043290 98 VKNIVSSRANSG-SLQVTGLVLDFFCVSMVDIAKELSLPSYIFLT 141 (430)
Q Consensus 98 ~~~~l~~~~~~~-~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~ 141 (430)
+..+++.+.+.. ...+.+||++.--..+...|+++|||++.+.+
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~ 61 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSP 61 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCc
Confidence 344555554421 23566788886445677889999999776543
No 223
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=22.12 E-value=81 Score=27.15 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=27.2
Q ss_pred ceEEEeccchh--hhhccCceeEEEe-ccCchh--HHHHHHhCCceee-ccc
Q 043290 339 RGMICGWVPQV--EILAHKAIGGFVS-HCGWNS--ILESLWYGVPIAT-WPI 384 (430)
Q Consensus 339 ~~~v~~~~pq~--~iL~~~~~~~~it-HgG~~s--~~eal~~GvP~v~-~P~ 384 (430)
.+.|..-+.-. ..|....+.+||| +||.+| ..=|-..|+|.|+ ++-
T Consensus 156 ~ILVa~~l~Ps~~~~l~~~~~~givt~~Gg~tSH~AIlAR~lgIPavvg~~~ 207 (258)
T 1zym_A 156 VILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGS 207 (258)
T ss_dssp EEEECSCCCHHHHHHSCGGGEEEEECSCCCSSSHHHHHHHHHTCCEECCCSC
T ss_pred eEEEECCCCHHHHHhhchhhcEEEEEcCCCcccHHHHHHHHcCCCEEEechh
Confidence 34444444433 3344557778999 666553 3345678999876 443
No 224
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=22.03 E-value=79 Score=26.92 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=29.4
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|+|..-++-|--.-...||..|+++|++ |.++-..
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~--VlliD~D 38 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKT--IMVVGCD 38 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCC--EEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCc--EEEEcCC
Confidence 6776777889999999999999999988 7676543
No 225
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=21.95 E-value=72 Score=29.43 Aligned_cols=36 Identities=22% Similarity=0.481 Sum_probs=27.4
Q ss_pred chhhhhccCceeEEEeccCchhHHHHHHh----CC-ceeeccc
Q 043290 347 PQVEILAHKAIGGFVSHCGWNSILESLWY----GV-PIATWPI 384 (430)
Q Consensus 347 pq~~iL~~~~~~~~itHgG~~s~~eal~~----Gv-P~v~~P~ 384 (430)
+..++-..+++ +|+=||-||++.|+.. ++ |++++..
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 34445556777 9999999999999754 67 7888863
No 226
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.94 E-value=1.2e+02 Score=25.04 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=0.0
Q ss_pred hHHHHHHHhhccC-CCCceEEEEcCCcchHHHHHHhcCCceEEEec
Q 043290 97 NVKNIVSSRANSG-SLQVTGLVLDFFCVSMVDIAKELSLPSYIFLT 141 (430)
Q Consensus 97 ~~~~~l~~~~~~~-~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~ 141 (430)
.++.+++...+.. ...+-+||++.--..+...|+++|||++.+.+
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECc
No 227
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=21.79 E-value=44 Score=30.36 Aligned_cols=38 Identities=11% Similarity=0.144 Sum_probs=25.5
Q ss_pred CCCcEEEEEcCCCCCCH----HHHHHHHHHHHhCCCCeEEEEEe
Q 043290 1 MKKAELIFVPSPGIGHL----VSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 1 m~~~~i~~~~~p~~GH~----~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+|+||+++.-+...-- .-...++++|.++||+ |..+.
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~--v~~i~ 42 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYH--VDIIY 42 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEE--EEEEE
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCE--EEEEE
Confidence 77889999985433222 3457789999999988 66665
No 228
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=21.67 E-value=2.4e+02 Score=24.17 Aligned_cols=31 Identities=16% Similarity=0.191 Sum_probs=23.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
++++++-++.| ==.++|++|+++|++ |.++.
T Consensus 30 k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~ 60 (280)
T 4da9_A 30 PVAIVTGGRRG---IGLGIARALAASGFD--IAITG 60 (280)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCe--EEEEe
Confidence 57777766653 346889999999988 76665
No 229
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=21.58 E-value=3.4e+02 Score=22.92 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=22.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
|+++++-++.| ==.++|++|+++|++ |.+..
T Consensus 29 k~vlVTGas~g---IG~aia~~la~~G~~--V~~~~ 59 (269)
T 4dmm_A 29 RIALVTGASRG---IGRAIALELAAAGAK--VAVNY 59 (269)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCE--EEEEe
Confidence 57777766643 346789999999988 66655
No 230
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=21.50 E-value=3.7e+02 Score=22.74 Aligned_cols=31 Identities=10% Similarity=0.161 Sum_probs=23.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEe
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLS 40 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~ 40 (430)
++++++-++.| ==.++|++|+++|++ |.++.
T Consensus 11 k~~lVTGas~g---IG~a~a~~l~~~G~~--V~~~~ 41 (281)
T 3s55_A 11 KTALITGGARG---MGRSHAVALAEAGAD--IAICD 41 (281)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCE--EEEEE
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCe--EEEEe
Confidence 57788777654 346889999999988 76665
No 231
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=21.25 E-value=3e+02 Score=23.47 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=23.1
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEEEec
Q 043290 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTLLSM 41 (430)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~v~Vt~~~~ 41 (430)
|+++++-++.| =-.++|++|+++|++ |.+..-
T Consensus 34 k~~lVTGas~G---IG~aia~~la~~G~~--V~~~~r 65 (275)
T 4imr_A 34 RTALVTGSSRG---IGAAIAEGLAGAGAH--VILHGV 65 (275)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCE--EEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCE--EEEEcC
Confidence 57777766643 246789999999988 766653
No 232
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=21.21 E-value=91 Score=25.98 Aligned_cols=45 Identities=11% Similarity=0.229 Sum_probs=28.9
Q ss_pred hHHHHHHHhhccC-CCCceEEEEcCCcchHHHHHHhcCCceEEEec
Q 043290 97 NVKNIVSSRANSG-SLQVTGLVLDFFCVSMVDIAKELSLPSYIFLT 141 (430)
Q Consensus 97 ~~~~~l~~~~~~~-~~~~D~vV~D~~~~~~~~~A~~lgiP~v~~~~ 141 (430)
.++++++.+.+.. ...+.+||+|.-...+...|+++|||++.+..
T Consensus 21 nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 21 NLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 4445555553311 13577888986555577889999999776543
No 233
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=21.00 E-value=48 Score=28.90 Aligned_cols=29 Identities=10% Similarity=0.244 Sum_probs=25.1
Q ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEEecC
Q 043290 282 GSFDVAQVKEIAIGLERSGYNFLWSLRVS 310 (430)
Q Consensus 282 ~~~~~~~~~~~~~al~~~~~~~vw~~~~~ 310 (430)
+..+.+..+.+.+++.+..++.||..+++
T Consensus 50 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 78 (274)
T 3g23_A 50 AGSDALRLSAFLECANDDAFEAVWFVRGG 78 (274)
T ss_dssp SSCHHHHHHHHHHHHTCTTCSEEEESCCS
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeecc
Confidence 35567889999999999999999999887
No 234
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=20.97 E-value=1.8e+02 Score=26.57 Aligned_cols=64 Identities=17% Similarity=0.140 Sum_probs=42.8
Q ss_pred ccchhhhhccCceeEEEe----ccCch--hHHHHHHhCCceee-cccccccchhHHHHhhhhceeEEeecc
Q 043290 345 WVPQVEILAHKAIGGFVS----HCGWN--SILESLWYGVPIAT-WPIYAEQQLNAFRMVKEQGLALDLRLD 408 (430)
Q Consensus 345 ~~pq~~iL~~~~~~~~it----HgG~~--s~~eal~~GvP~v~-~P~~~DQ~~~a~rv~~~~G~G~~~~~~ 408 (430)
|-..++++..+++.+++| |++.+ -+.++|.+|++++| -|+..|+-.-..++++..|+=..+...
T Consensus 57 ~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~~ 127 (372)
T 4gmf_A 57 YTSPEQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWINTF 127 (372)
T ss_dssp ESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEEECS
T ss_pred ECCHHHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEEcCc
Confidence 445677787788755553 66643 47889999999998 677666655555555555766666543
No 235
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=20.92 E-value=54 Score=26.69 Aligned_cols=30 Identities=7% Similarity=0.024 Sum_probs=20.7
Q ss_pred cchhHHHHhhhhceeEEeecccccCCcccCHhHHHHHHHHhh
Q 043290 388 QQLNAFRMVKEQGLALDLRLDYRVGSDLVMACDIESAVRCLM 429 (430)
Q Consensus 388 Q~~~a~rv~~~~G~G~~~~~~~~~~~~~~~~~~l~~ai~~vl 429 (430)
..+.+..=.+. |+|+ .+|+|+|.++|++++
T Consensus 101 ~id~~~Fe~~c-GVGV-----------~VT~EqI~~~V~~~i 130 (187)
T 3tl4_X 101 ASTKMGMNENS-GVGI-----------EITEDQVRNYVMQYI 130 (187)
T ss_dssp GCCHHHHHHTT-TTTC-----------CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHC-CCCe-----------EeCHHHHHHHHHHHH
Confidence 33444333444 9996 578999999999876
No 236
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=20.66 E-value=1.2e+02 Score=29.77 Aligned_cols=27 Identities=19% Similarity=0.255 Sum_probs=22.8
Q ss_pred eeEEEeccCc------hhHHHHHHhCCceeecc
Q 043290 357 IGGFVSHCGW------NSILESLWYGVPIATWP 383 (430)
Q Consensus 357 ~~~~itHgG~------~s~~eal~~GvP~v~~P 383 (430)
.+++++|.|- ++++||-+.++|||++-
T Consensus 95 pgv~~~TsGpG~~N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 95 PVLLICTSGTAAANFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp CEEEEECSSHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 3449999996 58899999999999974
No 237
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=20.57 E-value=68 Score=30.89 Aligned_cols=25 Identities=8% Similarity=-0.041 Sum_probs=20.6
Q ss_pred eEEEeccCc------hhHHHHHHhCCceeec
Q 043290 358 GGFVSHCGW------NSILESLWYGVPIATW 382 (430)
Q Consensus 358 ~~~itHgG~------~s~~eal~~GvP~v~~ 382 (430)
+++++|.|- +.++||-+.++|||++
T Consensus 65 ~v~~~tsGpG~~N~~~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 65 AFINLHSAAGTGNAMGALSNAWNSHSPLIVT 95 (528)
T ss_dssp EEEEEEHHHHHHHTHHHHHHHHHTTCCEEEE
T ss_pred EEEEEcCChHHHHHHHHHHHHhhcCCCEEEE
Confidence 347788774 4789999999999998
No 238
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.37 E-value=93 Score=29.39 Aligned_cols=25 Identities=16% Similarity=0.131 Sum_probs=20.6
Q ss_pred CceEEEEcCCcchHHHHHHhcCCceEEE
Q 043290 112 QVTGLVLDFFCVSMVDIAKELSLPSYIF 139 (430)
Q Consensus 112 ~~D~vV~D~~~~~~~~~A~~lgiP~v~~ 139 (430)
++|++|.+.. ...+|+++|||++.+
T Consensus 375 ~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 375 QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 8999998853 567899999997754
No 239
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=20.25 E-value=1.7e+02 Score=24.63 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCCC-----------CHHHHHHHHHHHHhCCCCeEEEEEecC
Q 043290 1 MKKAELIFVPSPGIG-----------HLVSTLEFAKHLTDRDDRISVTLLSMK 42 (430)
Q Consensus 1 m~~~~i~~~~~p~~G-----------H~~P~l~La~~L~~rGH~v~Vt~~~~~ 42 (430)
|..+||+++-....+ ...=+......|.+.|++ |+++++.
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~--v~~~s~~ 51 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFE--VDFVSET 51 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCE--EEEECSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCE--EEEECCC
Confidence 443468888765332 445677777888899977 9899865
Done!