BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043292
(558 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 197/312 (63%), Gaps = 20/312 (6%)
Query: 212 ADEIEEDYLDQVPGLPKRFSFEELKVMTDNF--RKMLGKGGFGSVFEGTQTDGTKVAVKR 269
A+E E +L Q+ KRFS EL+V +DNF + +LG+GGFG V++G DGT VAVKR
Sbjct: 14 AEEDPEVHLGQL----KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKR 69
Query: 270 LE----GIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLF 325
L+ GE+ F EV+ I H+NL+RL GFC + LLVY YM NGS+ L
Sbjct: 70 LKEERXQGGELQ--FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 127
Query: 326 QRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFG 384
+R + + LDW +R++I L A+GL YLH+ C KI+H D+K NILLD F A V DFG
Sbjct: 128 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 187
Query: 385 LSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
L+KL+D V +RGT G++APE+LS+ +EK D++ +GV++LE++ G++ FD ++
Sbjct: 188 LAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
Query: 444 -PEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSN--GEEVVNMMKVAAWCLESDFAKR 500
++D+ LL K +E KL LVD D+Q N EEV +++VA C +S +R
Sbjct: 248 LANDDDVMLLDWVKGLLKEKKLEALVDV---DLQGNYKDEEVEQLIQVALLCTQSSPMER 304
Query: 501 PSMSMVVRVLEG 512
P MS VVR+LEG
Sbjct: 305 PKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 195/312 (62%), Gaps = 20/312 (6%)
Query: 212 ADEIEEDYLDQVPGLPKRFSFEELKVMTDNF--RKMLGKGGFGSVFEGTQTDGTKVAVKR 269
A+E E +L Q+ KRFS EL+V +DNF + +LG+GGFG V++G DG VAVKR
Sbjct: 6 AEEDPEVHLGQL----KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKR 61
Query: 270 LE----GIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLF 325
L+ GE+ F EV+ I H+NL+RL GFC + LLVY YM NGS+ L
Sbjct: 62 LKEERTQGGELQ--FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
Query: 326 QRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFG 384
+R + + LDW +R++I L A+GL YLH+ C KI+H D+K NILLD F A V DFG
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 385 LSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
L+KL+D V +RG G++APE+LS+ +EK D++ +GV++LE++ G++ FD ++
Sbjct: 180 LAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 444 -PEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSN--GEEVVNMMKVAAWCLESDFAKR 500
++D+ LL K +E KL LVD D+Q N EEV +++VA C +S +R
Sbjct: 240 LANDDDVMLLDWVKGLLKEKKLEALVDV---DLQGNYKDEEVEQLIQVALLCTQSSPMER 296
Query: 501 PSMSMVVRVLEG 512
P MS VVR+LEG
Sbjct: 297 PKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 163/299 (54%), Gaps = 22/299 (7%)
Query: 230 FSFEELKVMTDNFRKM--------LGKGGFGSVFEGTQTDGTKVAVKRLEGI-----GEI 276
FSF ELK +T+NF + +G+GGFG V++G + T VAVK+L + E+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 277 NKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQ 336
+ F E+K + H+NLV L+GF ++ LVY YMPNGSL L L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQ 395
R KI A G+ +LHE+ +H DIK NILLD F AK++DFGL++ ++ Q+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 396 VVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIF 455
+ + + GT Y+APE L IT K DIYSFGVV+LEI+ G D + E + L
Sbjct: 191 MXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLLDIKE 248
Query: 456 KKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVT 514
+ + EE + D +DK ND S E M VA+ CL KRP + V ++L+ +T
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVEA--MYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 162/299 (54%), Gaps = 22/299 (7%)
Query: 230 FSFEELKVMTDNFRKM--------LGKGGFGSVFEGTQTDGTKVAVKRLEGI-----GEI 276
FSF ELK +T+NF + +G+GGFG V++G + T VAVK+L + E+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 277 NKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQ 336
+ F E+K + H+NLV L+GF ++ LVY YMPNGSL L L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQ 395
R KI A G+ +LHE+ +H DIK NILLD F AK++DFGL++ ++ Q+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 396 VVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIF 455
+ + GT Y+APE L IT K DIYSFGVV+LEI+ G D + E + L
Sbjct: 191 MXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLLDIKE 248
Query: 456 KKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVT 514
+ + EE + D +DK ND S E M VA+ CL KRP + V ++L+ +T
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVEA--MYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 161/300 (53%), Gaps = 24/300 (8%)
Query: 230 FSFEELKVMTDNFRKM--------LGKGGFGSVFEGTQTDGTKVAVKRLEGI-----GEI 276
FSF ELK +T+NF + +G+GGFG V++G + T VAVK+L + E+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 277 NKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQ 336
+ F E+K + H+NLV L+GF ++ LVY YMPNGSL L L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
R KI A G+ +LHE+ +H DIK NILLD F AK++DFGL++ + +Q
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQX 183
Query: 397 VTTMR--GTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
V R GT Y+APE L IT K DIYSFGVV+LEI+ G D + E + L
Sbjct: 184 VMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLLDIK 241
Query: 455 FKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVT 514
+ + EE + D +DK ND S E M VA+ CL KRP + V ++L+ +T
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDADSTSVEA--MYSVASQCLHEKKNKRPDIKKVQQLLQEMT 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 155/299 (51%), Gaps = 22/299 (7%)
Query: 230 FSFEELKVMTDNFRKM--------LGKGGFGSVFEGTQTDGTKVAVKRLEGI-----GEI 276
FSF ELK +T+NF + G+GGFG V++G + T VAVK+L + E+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 277 NKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQ 336
+ F E+K H+NLV L+GF ++ LVY Y PNGSL L L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQ 395
R KI A G+ +LHE+ +H DIK NILLD F AK++DFGL++ ++ Q
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 396 VVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIF 455
+ + GT Y APE L IT K DIYSFGVV+LEI+ G D + E + L
Sbjct: 182 XXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLLDIKE 239
Query: 456 KKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVT 514
+ + EE + D +DK ND S E VA+ CL KRP + V ++L+ T
Sbjct: 240 EIEDEEKTIEDYIDKKXNDADSTSVEA--XYSVASQCLHEKKNKRPDIKKVQQLLQEXT 296
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 15/306 (4%)
Query: 213 DEIEEDYLDQVPGLPKRFSFEELKVMTDNF--RKMLGKGGFGSVFEGTQTDGTKVAVKR- 269
D + YL VP R +L+ T+NF + ++G G FG V++G DG KVA+KR
Sbjct: 14 DALSSSYL--VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71
Query: 270 LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD 329
+ + F E++T+ H +LV LIGFC E++ +L+Y+YM NG+L R L+
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
Query: 330 EFM-LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL 388
M + W+QR +I + A+GL YLH + I+H D+K NILLD NF K+ DFG+SK
Sbjct: 132 PTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKK 188
Query: 389 -IDQDQSQVVTTMRGTPGYLAPEW-LSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
+ DQ+ + ++GT GY+ PE+ + +TEK D+YSFGVV+ E+LC R +S P E
Sbjct: 189 GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 447 EDMYLLSIFKKKAEED-KLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSM 505
M L+ + ++ + +L +VD + D + E + A CL RPSM
Sbjct: 249 --MVNLAEWAVESHNNGQLEQIVDPNLAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGD 305
Query: 506 VVRVLE 511
V+ LE
Sbjct: 306 VLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 15/306 (4%)
Query: 213 DEIEEDYLDQVPGLPKRFSFEELKVMTDNF--RKMLGKGGFGSVFEGTQTDGTKVAVKR- 269
D + YL VP R +L+ T+NF + ++G G FG V++G DG KVA+KR
Sbjct: 14 DALSSSYL--VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71
Query: 270 LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD 329
+ + F E++T+ H +LV LIGFC E++ +L+Y+YM NG+L R L+
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
Query: 330 EFM-LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL 388
M + W+QR +I + A+GL YLH + I+H D+K NILLD NF K+ DFG+SK
Sbjct: 132 PTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKK 188
Query: 389 -IDQDQSQVVTTMRGTPGYLAPEW-LSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
+ Q+ + ++GT GY+ PE+ + +TEK D+YSFGVV+ E+LC R +S P E
Sbjct: 189 GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 447 EDMYLLSIFKKKAEED-KLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSM 505
M L+ + ++ + +L +VD + D + E + A CL RPSM
Sbjct: 249 --MVNLAEWAVESHNNGQLEQIVDPNLAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGD 305
Query: 506 VVRVLE 511
V+ LE
Sbjct: 306 VLWKLE 311
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQNLVR 297
N ++ +G G FG+V + G+ VAVK L + E FL EV + + H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
+G + + +V EY+ GSL R L + LD ++R + D+AKG+ YLH +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIIT 417
I+H D+K N+L+D + KV DFGLS+L GTP ++APE L +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 418 -EKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EK D+YSFGV++ E+ ++ + P +
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQNLVR 297
N ++ +G G FG+V + G+ VAVK L + E FL EV + + H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
+G + + +V EY+ GSL R L + LD ++R + D+AKG+ YLH +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIIT 417
I+H ++K N+L+D + KV DFGLS+L + GTP ++APE L +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 418 -EKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EK D+YSFGV++ E+ ++ + P +
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 112/202 (55%), Gaps = 15/202 (7%)
Query: 243 RKMLGKGGFGSVFEGT--QTDGTK---VAVKRLE-GIGEINK-SFLAEVKTIGSIHHQNL 295
+K++G G FG V++G + G K VA+K L+ G E + FL E +G H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
+RL G ++ +++ EYM NG+LD++L ++ EF + Q ++ IA G+ YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYL--- 163
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG--YLAPEWLS 413
+H D+ +NIL++ N KV+DFGLS++++ D TT G + APE +S
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 414 -SIITEKVDIYSFGVVMLEILC 434
T D++SFG+VM E++
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 118/223 (52%), Gaps = 30/223 (13%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVK--------RLEGIGEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V G + G KVAVK L+ +G+I + E++ + H +++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR----EIQNLKLFRHPHII 79
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+L + S +V EY+ G L ++ + LD ++ +++ I G+ Y H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCH--- 133
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII 416
R ++H D+KP+N+LLD + NAK+ADFGLS ++ + + G+P Y APE +S +
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAPEVISGRL 191
Query: 417 TE--KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
+VDI+S GV++ +LCG FD D ++ ++FKK
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFD-------DDHVPTLFKK 227
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 31/313 (9%)
Query: 217 EDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLE- 271
E + + PG R E++ + K++G G G V G + G + VA+K L+
Sbjct: 28 EPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA 87
Query: 272 GIGEINKS-FLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDE 330
G E + FL+E +G H N++RL G ++V EYM NGSLD +L +
Sbjct: 88 GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ 147
Query: 331 FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLID 390
F + Q ++ + G+ YL + +H D+ +N+L+D N KV+DFGLS++++
Sbjct: 148 FTI--MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202
Query: 391 QDQSQVVTTMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEE 447
D TT G + APE ++ + D++SFGVVM E+L
Sbjct: 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------- 249
Query: 448 DMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVV 507
Y + D +S + + + ++ + + W D A+RP S +V
Sbjct: 250 --YGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCW--HKDRAQRPRFSQIV 305
Query: 508 RVLEGVTEFEHNL 520
VL+ + +L
Sbjct: 306 SVLDALIRSPESL 318
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 33/314 (10%)
Query: 217 EDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-----QTDGTKVAVKRLE 271
E + + PG R E++ + K++G G G V G Q D VA+K L+
Sbjct: 28 EPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRD-VPVAIKALK 86
Query: 272 -GIGEINKS-FLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD 329
G E + FL+E +G H N++RL G ++V EYM NGSLD +L
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 330 EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLI 389
+F + Q ++ + G+ YL + +H D+ +N+L+D N KV+DFGLS+++
Sbjct: 147 QFTI--MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Query: 390 DQDQSQVVTTMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
+ D TT G + APE ++ + D++SFGVVM E+L
Sbjct: 202 EDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------ 249
Query: 447 EDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMV 506
Y + D +S + + + ++ + + W D A+RP S +
Sbjct: 250 ---YGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCW--HKDRAQRPRFSQI 304
Query: 507 VRVLEGVTEFEHNL 520
V VL+ + +L
Sbjct: 305 VSVLDALIRSPESL 318
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F + +G G FG V G + KVA+K + + F+ E + + + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C E++ LV+E+M +G L +L R+ + + + LD+ +G+ YL E C +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEK 419
+H D+ +N L+ N KV+DFG+++ + DQ T + + +PE S S + K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 420 VDIYSFGVVMLEILCGRKV 438
D++SFGV+M E+ K+
Sbjct: 185 SDVWSFGVLMWEVFSEGKI 203
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F + +G G FG V G + KVA+K + + F+ E + + + H LV+L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C E++ LV+E+M +G L +L R+ + + + LD+ +G+ YL E C +
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEK 419
+H D+ +N L+ N KV+DFG+++ + DQ T + + +PE S S + K
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 420 VDIYSFGVVMLEILCGRKV 438
D++SFGV+M E+ K+
Sbjct: 183 SDVWSFGVLMWEVFSEGKI 201
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F + +G G FG V G + KVA+K + + F+ E + + + H LV+L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C E++ LV+E+M +G L +L R+ + + + LD+ +G+ YL E C +
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEK 419
+H D+ +N L+ N KV+DFG+++ + DQ T + + +PE S S + K
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 420 VDIYSFGVVMLEILCGRKV 438
D++SFGV+M E+ K+
Sbjct: 188 SDVWSFGVLMWEVFSEGKI 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKR--LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
++LGKG FG + T + +V V + + E ++FL EVK + + H N+++ IG
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 302 CAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKIL 361
+ + EY+ G+L R + + D W QR DIA G+ YLH I+
Sbjct: 76 LYKDKRLNFITEYIKGGTL-RGIIKSMDS-QYPWSQRVSFAKDIASGMAYLHS---MNII 130
Query: 362 HLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-------------VTTMRGTPGYLA 408
H D+ N L+ N N VADFGL++L+ +++Q T+ G P ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 409 PEWLSS-IITEKVDIYSFGVVMLEIL 433
PE ++ EKVD++SFG+V+ EI+
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F + +G G FG V G + KVA+K ++ F+ E + + + H LV+L G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C E++ LV+E+M +G L +L R+ + + + LD+ +G+ YL E C +
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEK 419
+H D+ +N L+ N KV+DFG+++ + DQ T + + +PE S S + K
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 420 VDIYSFGVVMLEILCGRKV 438
D++SFGV+M E+ K+
Sbjct: 205 SDVWSFGVLMWEVFSEGKI 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 6/199 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F + +G G FG V G + KVA+K + + F+ E + + + H LV+L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C E++ LV E+M +G L +L R+ + + + LD+ +G+ YL E C +
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEK 419
+H D+ +N L+ N KV+DFG+++ + DQ T + + +PE S S + K
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 420 VDIYSFGVVMLEILCGRKV 438
D++SFGV+M E+ K+
Sbjct: 186 SDVWSFGVLMWEVFSEGKI 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 22/227 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSF 280
P++++ E+ ++ + LGKG FG+V+ + KV K +LE G +
Sbjct: 2 PRQWALEDFEIG-----RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQL 55
Query: 281 LAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKK 340
EV+ + H N++RL G+ + + L+ EY P G++ R L Q+ +F D Q+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTAT 112
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
I ++A L+Y H ++++H DIKP+N+LL K+ADFG S S TT+
Sbjct: 113 YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTL 166
Query: 401 RGTPGYLAPEWLSSII-TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
GT YL PE + + EKVD++S GV+ E L G+ F+ + +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 73
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 127
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 136/301 (45%), Gaps = 44/301 (14%)
Query: 230 FSFEELKVMTDN---FRKMLGKGGFGSVFEGTQT-DGTKVAVKRL-----EGIGEI---N 277
F L + DN + K +GKGGFG V +G D + VA+K L EG E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 278 KSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
+ F EV + +++H N+V+L G +V E++P G L L ++ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSV 123
Query: 338 RKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL-----DGNFNAKVADFGLSKLIDQD 392
+ +++LDIA G+ Y+ ++ I+H D++ NI L + AKVADFGLS Q
Sbjct: 124 KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQ 178
Query: 393 QSQVVTTMRGTPGYLAPEWLSS---IITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDM 449
V+ + G ++APE + + TEK D YSF +++ IL G FD E
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYS 232
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRV 509
Y F E+ L + + N V C D KRP S +V+
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRN---------VIELCWSGDPKKRPHFSYIVKE 283
Query: 510 L 510
L
Sbjct: 284 L 284
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 98
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 152
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 209
Query: 417 TEKVDIYSFGVVMLEILCGRKVFD 440
EKVD++S GV+ E L G+ F+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 89
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 143
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + +
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 200
Query: 417 TEKVDIYSFGVVMLEILCGRKVFD 440
EKVD++S GV+ E L G+ F+
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVK--------RLEGIGEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V G Q G KVAVK L+ +G+I + E++ + H +++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR----EIQNLKLFRHPHII 74
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+L + + +V EY+ G L ++ + ++ + +++ I + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCH--- 128
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII 416
R ++H D+KP+N+LLD + NAK+ADFGLS ++ + + T G+P Y APE +S +
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRTSCGSPNYAAPEVISGRL 186
Query: 417 TE--KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
+VDI+S GV++ +LCG FD D ++ ++FKK
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFD-------DEHVPTLFKK 222
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 6/199 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F + +G G FG V G + KVA+K + + F+ E + + + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C E++ LV+E+M +G L +L R+ + + + LD+ +G+ YL E +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASV 124
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEK 419
+H D+ +N L+ N KV+DFG+++ + DQ T + + +PE S S + K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 420 VDIYSFGVVMLEILCGRKV 438
D++SFGV+M E+ K+
Sbjct: 185 SDVWSFGVLMWEVFSEGKI 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 77
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 131
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 246 LGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG FG+V+ + KV K +LE G + EV+ + H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 77
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H ++
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS---KR 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-TE 418
++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + + E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEE 446
KVD++S GV+ E L G+ F+ + +E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 157 ASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILR 76
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ F D Q+ I ++A L+Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSRF--DEQRTATYITELANALSYCHS--- 130
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL N K+ADFG S S TT+ GT YL PE + +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 417 TEKVDIYSFGVVMLEILCGRKVFD 440
EKVD++S GV+ E L G F+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 69
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 127
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 128 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 86
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 144
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 145 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 71
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 125
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + +
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 69
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 123
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + +
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 96
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 154
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 155 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----------EVKTIGSIHH 292
K LG+G FG V T G KVA+K INK LA E+ + + H
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKI------INKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
++++L K ++V EY N D ++ QR + Q+ ++ I + Y
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRFFQQIISAVEYC 123
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H R KI+H D+KP+N+LLD + N K+ADFGLS ++ + T G+P Y APE +
Sbjct: 124 H---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 178
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
S + +VD++S GV++ +LC R FD
Sbjct: 179 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----------EVKTIGSIHH 292
K LG+G FG V T G KVA+K INK LA E+ + + H
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKI------INKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
++++L K ++V EY N D ++ QR + Q+ ++ I + Y
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRFFQQIISAVEYC 128
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H R KI+H D+KP+N+LLD + N K+ADFGLS ++ + T G+P Y APE +
Sbjct: 129 H---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 183
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
S + +VD++S GV++ +LC R FD
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----------EVKTIGSIHH 292
K LG+G FG V T G KVA+K INK LA E+ + + H
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKI------INKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
++++L K ++V EY N D ++ QR + Q+ ++ I + Y
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRFFQQIISAVEYC 129
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H R KI+H D+KP+N+LLD + N K+ADFGLS ++ + T G+P Y APE +
Sbjct: 130 H---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 184
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
S + +VD++S GV++ +LC R FD
Sbjct: 185 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 246 LGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG FG+V+ + KV K +LE G + EV+ + H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 77
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H ++
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS---KR 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-TE 418
++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + + E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEE 446
KVD++S GV+ E L G+ F+ + +E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----------EVKTIGSIHH 292
K LG+G FG V T G KVA+K INK LA E+ + + H
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKI------INKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
++++L K ++V EY N D ++ QR + Q+ ++ I + Y
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRFFQQIISAVEYC 119
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H R KI+H D+KP+N+LLD + N K+ADFGLS ++ + T G+P Y APE +
Sbjct: 120 H---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 174
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
S + +VD++S GV++ +LC R FD
Sbjct: 175 SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 76
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 130
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + +
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 17/208 (8%)
Query: 246 LGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG FG+V+ + KV K +LE G + EV+ + H N++RL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 79
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
G+ + + L+ EY P G + + L Q+ +F D Q+ I ++A L+Y H ++
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKEL-QKLSKF--DEQRTATYITELANALSYCHS---KR 133
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-TE 418
++H DIKP+N+LL K+ADFG S S TT+ GT YL PE + + E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEE 446
KVD++S GV+ E L G+ F+ + +E
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 22/227 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSF 280
P++++ E+ ++ + LGKG FG+V+ + KV K +LE G +
Sbjct: 2 PRQWALEDFEIG-----RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQL 55
Query: 281 LAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKK 340
EV+ + H N++RL G+ + + L+ EY P G++ R L Q+ +F D Q+
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTAT 112
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
I ++A L+Y H ++++H DIKP+N+LL K+ADFG S S T +
Sbjct: 113 YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTEL 166
Query: 401 RGTPGYLAPEWLSSII-TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
GT YL PE + + EKVD++S GV+ E L G+ F+ + +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 135/301 (44%), Gaps = 44/301 (14%)
Query: 230 FSFEELKVMTDN---FRKMLGKGGFGSVFEGTQT-DGTKVAVKRL-----EGIGEI---N 277
F L + DN + K +GKGGFG V +G D + VA+K L EG E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 278 KSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
+ F EV + +++H N+V+L G +V E++P G L L ++ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSV 123
Query: 338 RKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL-----DGNFNAKVADFGLSKLIDQD 392
+ +++LDIA G+ Y+ ++ I+H D++ NI L + AKVADFG S Q
Sbjct: 124 KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQ 178
Query: 393 QSQVVTTMRGTPGYLAPEWLSS---IITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDM 449
V+ + G ++APE + + TEK D YSF +++ IL G FD E
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYS 232
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRV 509
Y F E+ L + + N V C D KRP S +V+
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRN---------VIELCWSGDPKKRPHFSYIVKE 283
Query: 510 L 510
L
Sbjct: 284 L 284
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 77
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 131
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S TT+ GT YL PE +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGL+++++ D TT G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 74
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 128
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+A+FG S S TT+ GT YL PE + +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 246 LGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG FG+V+ + KV K +LE G + EV+ + H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 77
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H ++
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS---KR 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-TE 418
++H DIKP+N+LL K+A+FG S S TT+ GT YL PE + + E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEE 446
KVD++S GV+ E L G+ F+ + +E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 135/301 (44%), Gaps = 44/301 (14%)
Query: 230 FSFEELKVMTDN---FRKMLGKGGFGSVFEGTQT-DGTKVAVKRL-----EGIGEI---N 277
F L + DN + K +GKGGFG V +G D + VA+K L EG E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 278 KSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
+ F EV + +++H N+V+L G +V E++P G L L ++ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSV 123
Query: 338 RKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL-----DGNFNAKVADFGLSKLIDQD 392
+ +++LDIA G+ Y+ ++ I+H D++ NI L + AKVADF LS Q
Sbjct: 124 KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQ 178
Query: 393 QSQVVTTMRGTPGYLAPEWLSS---IITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDM 449
V+ + G ++APE + + TEK D YSF +++ IL G FD E
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYS 232
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRV 509
Y F E+ L + + N V C D KRP S +V+
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRN---------VIELCWSGDPKKRPHFSYIVKE 283
Query: 510 L 510
L
Sbjct: 284 L 284
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGL ++++ D TT G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 126
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S T + GT YL PE + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 30/223 (13%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVK--------RLEGIGEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V G Q G KVAVK L+ +G+I + E++ + H +++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR----EIQNLKLFRHPHII 74
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+L + + +V EY+ G L ++ + ++ + +++ I + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCH--- 128
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII 416
R ++H D+KP+N+LLD + NAK+ADFGLS ++ + + G+P Y APE +S +
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRDSCGSPNYAAPEVISGRL 186
Query: 417 TE--KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
+VDI+S GV++ +LCG FD D ++ ++FKK
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFD-------DEHVPTLFKK 222
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 73
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 127
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S T+ GT YL PE + +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 90 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 144
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 205 FGILLTEIVTHGRI 218
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 73
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 127
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S T + GT YL PE + +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 87 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 141
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 202 FGILLTEIVTHGRI 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 83 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 137
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 198 FGILLTEIVTHGRI 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + + KV K +LE G + EV+ + H N++R
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 126
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
+K++H DIKP+N+LL K+ADFG S S + GT YL PE + +
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 417 TEKVDIYSFGVVMLEILCGRKVFD 440
EKVD++S GV+ E L G+ F+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 81 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 196 FGILLTEIVTHGRI 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 89 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 143
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 204 FGILLTEIVTHGRI 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILR 76
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ F D Q+ I ++A L+Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSRF--DEQRTATYITELANALSYCHS--- 130
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL N K+ADFG S S T+ GT YL PE + +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEMIEGRMH 187
Query: 417 TEKVDIYSFGVVMLEILCGRKVFD 440
EKVD++S GV+ E L G F+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 82 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 136
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 197 FGILLTEIVTHGRI 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 126
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S T + GT YL PE + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 76 PIX-IVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 130
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 191 FGILLTELTTKGRV 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 77
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 131
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S T + GT YL PE + +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 81 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 196 FGILLTEIVTHGRI 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 126
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S T + GT YL PE + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 86 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 201 FGILLTEIVTHGRI 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 87 PI-YIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 141
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 202 FGILLTEIVTHGRI 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 91 PIYIIT-EYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 145
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 205
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 206 FGILLTEIVTHGRI 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L + L + + IA+G+ ++ E + +H D+
Sbjct: 81 PIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 196 FGILLTEIVTHGRI 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L + L + + IA+G+ ++ E + +H D+
Sbjct: 76 PIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 130
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 190
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 191 FGILLTEIVTHGRI 204
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 79 PI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 194 FGILLTELTTKGRV 207
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 252 PI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 367 FGILLTELTTKGRV 380
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 69
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V E M NGSLD +L + +F + Q ++ I
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 127
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 128 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 252 PI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 367 FGILLTELTTKGRV 380
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 21/204 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
K LG G FG V+ G + TKVAVK L+ ++FL E + ++ H LVRL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--------DIAKGLTYLHED 355
+ ++ EYM GSL +L +SDE K++L IA+G+ Y+
Sbjct: 79 REEPIYIITEYMAKGSLLDFL--KSDE-------GGKVLLPKLIDFSAQIAEGMAYIE-- 127
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-S 414
R+ +H D++ N+L+ + K+ADFGL+++I+ ++ + + APE ++
Sbjct: 128 -RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 186
Query: 415 IITEKVDIYSFGVVMLEILCGRKV 438
T K D++SFG+++ EI+ K+
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKI 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S + GT YL PE + +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V E M NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 157 ASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + I H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 P-IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 335 PI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 389
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 450 FGILLTELTTKGRV 463
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLEGIGEINKS---FLAEVK 285
+EL +++G G FG V G + G + VA+K L+ +G K FL E
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK-VGYTEKQRRDFLCEAS 96
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N+V L G ++V E+M NG+LD +L + +F + Q ++ I
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGI 154
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT-- 403
A G+ YL + +H D+ +NIL++ N KV+DFGLS++I+ D V TT G
Sbjct: 155 AAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 404 PGYLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE + T D++S+G+VM E++
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINKS---FLAEVK 285
+EL + K++G G FG V G +K VA+K L+ +G K FL E
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++RL G + ++V E M NGSLD +L + +F + Q ++ I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
A G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ +PE ++ T D++S+G+V+ E++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 126
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S + GT YL PE + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
+++G+G FG V + + VA+K++E E K+F+ E++ + ++H N+V+L G C
Sbjct: 14 EVVGRGAFGVVCKA-KWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
LV EY GSL L L ++G+ YLH + ++H
Sbjct: 72 NPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 364 DIKPQNILL-DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVD 421
D+KP N+LL G K+ DFG + D +T +G+ ++APE + S +EK D
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 422 IYSFGVVMLEILCGRKVFDR-SQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGE 480
++S+G+++ E++ RK FD P M+ + L+ ++S
Sbjct: 186 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-------HNGTRPPLIKNLPKPIES--- 235
Query: 481 EVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEF 516
+ C D ++RPSM +V+++ + +
Sbjct: 236 -------LMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 246 LGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG FG+V+ + KV K +LE G + EV+ + H N++RL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 79
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
G+ + + L+ EY P G + + L Q+ +F D Q+ I ++A L+Y H ++
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKEL-QKLSKF--DEQRTATYITELANALSYCHS---KR 133
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-TE 418
++H DIKP+N+LL K+ADFG S S + GT YL PE + + E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEE 446
KVD++S GV+ E L G+ F+ + +E
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+++ EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 PIYIVI-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLEGIGEINKS---FLAEVK 285
+E++ +++G G FG V G + G + VA+K L+ +G K FL E
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK-VGYTEKQRRDFLGEAS 75
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+G H N++ L G + ++V EYM NGSLD +L + +F + Q ++ I
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGI 133
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
+ G+ YL + +H D+ +NIL++ N KV+DFGLS++++ D TT G
Sbjct: 134 SAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 406 --YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE ++ T D++S+G+VM E++
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
+++G+G FG V + + VA+K++E E K+F+ E++ + ++H N+V+L G C
Sbjct: 15 EVVGRGAFGVVCKA-KWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
LV EY GSL L L ++G+ YLH + ++H
Sbjct: 73 NPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 364 DIKPQNILL-DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVD 421
D+KP N+LL G K+ DFG + D +T +G+ ++APE + S +EK D
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 422 IYSFGVVMLEILCGRKVFDR-SQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGE 480
++S+G+++ E++ RK FD P M+ + L+ ++S
Sbjct: 187 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-------HNGTRPPLIKNLPKPIES--- 236
Query: 481 EVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEF 516
+ C D ++RPSM +V+++ + +
Sbjct: 237 -------LMTRCWSKDPSQRPSMEEIVKIMTHLMRY 265
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 252 PI-YIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 367 FGILLTELTTKGRV 380
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+++ EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 PIYIVI-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 198 FGILLTELTTKGRV 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 74
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 128
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S + GT YL PE + +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 75 PI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 129
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 190 FGILLTELTTKGRV 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 77 PI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 131
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 192 FGILLTELTTKGRV 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 98
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 152
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S + GT YL PE + +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 417 TEKVDIYSFGVVMLEILCGRKVFD 440
EKVD++S GV+ E L G+ F+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 218 DYLDQVPGLPKRFSFEELKVMTDNFR--KMLGKGGFGSVFE-----GTQTDGTKVAVKRL 270
D+L PG+ F + +D ++ ++LGKG FG V Q KV KR
Sbjct: 7 DHLHATPGM---FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 63
Query: 271 EGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDE 330
+S L EV+ + + H N+++L F +K + LV E G L + R
Sbjct: 64 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 123
Query: 331 FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDG---NFNAKVADFGLSK 387
+D +II + G+TY+H + KI+H D+KP+N+LL+ + N ++ DFGLS
Sbjct: 124 SEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 388 LIDQDQSQVVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCG 435
+ S+ + GT Y+APE L EK D++S GV++ +L G
Sbjct: 178 HFEA--SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 218 DYLDQVPGLPKRFSFEELKVMTDNFR--KMLGKGGFGSVFE-----GTQTDGTKVAVKRL 270
D+L PG+ F + +D ++ ++LGKG FG V Q KV KR
Sbjct: 30 DHLHATPGM---FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 86
Query: 271 EGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDE 330
+S L EV+ + + H N+++L F +K + LV E G L + R
Sbjct: 87 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 146
Query: 331 FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDG---NFNAKVADFGLSK 387
+D +II + G+TY+H + KI+H D+KP+N+LL+ + N ++ DFGLS
Sbjct: 147 SEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 200
Query: 388 LIDQDQSQVVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCG 435
+ S+ + GT Y+APE L EK D++S GV++ +L G
Sbjct: 201 HFEA--SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 P-IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L + ++ L Q + IA G+ Y+ R +H D+
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 198 FGILLTELTTKGRV 211
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 218 DYLDQVPGLPKRFSFEELKVMTDNFR--KMLGKGGFGSVFE-----GTQTDGTKVAVKRL 270
D+L PG+ F + +D ++ ++LGKG FG V Q KV KR
Sbjct: 31 DHLHATPGM---FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 87
Query: 271 EGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDE 330
+S L EV+ + + H N+++L F +K + LV E G L + R
Sbjct: 88 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 147
Query: 331 FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDG---NFNAKVADFGLSK 387
+D +II + G+TY+H + KI+H D+KP+N+LL+ + N ++ DFGLS
Sbjct: 148 SEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 201
Query: 388 LIDQDQSQVVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCG 435
+ S+ + GT Y+APE L EK D++S GV++ +L G
Sbjct: 202 HFEA--SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G FG V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L + L + + IA+G+ ++ E + +H ++
Sbjct: 77 PI-YIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRNL 131
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ ++ + + APE ++ T K D++S
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 191
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 192 FGILLTEIVTHGRI 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 246 LGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG FG+V+ + KV K +LE G + EV+ + H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 77
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H ++
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS---KR 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-TE 418
++H DIKP+N+LL K+ADFG S S + GT YL PE + + E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEE 446
KVD++S GV+ E L G+ F+ + +E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 P-IYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 126
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S + GT YL PE + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 253 PI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL +LI+ ++ + + APE L T K D++S
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 368 FGILLTELTTKGRV 381
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
+ LGKG FG+V+ + KV K +LE G + EV+ + H N++R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILR 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G+ + + L+ EY P G++ R L Q+ +F D Q+ I ++A L+Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL-QKLSKF--DEQRTATYITELANALSYCHS--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII- 416
++++H DIKP+N+LL K+ADFG S S + GT YL PE + +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++S GV+ E L G+ F+ + +E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 132/290 (45%), Gaps = 39/290 (13%)
Query: 244 KMLGKGGFGSVFEGT--QTDGT--KVAVKRLEGIGEINKS---FLAEVKTIGSIHHQNLV 296
K+LG+G FGSV EG Q DGT KVAVK ++ + FL+E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 297 RLIGFCAEKSHN-----LLVYEYMPNGSLDRWLFQRSDEF---MLDWQQRKKIILDIAKG 348
RL+G C E S +++ +M G L +L E + Q K ++DIA G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLI-DQDQSQVVTTMRGTPGYL 407
+ YL + LH D+ +N +L + VADFGLSK I D + + ++
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 408 APEWLSS-IITEKVDIYSFGVVMLEILC-GRKVFDRSQPEEEDMYLLSIFKKKAEEDKLS 465
A E L+ + T K D+++FGV M EI G + Q E YLL + K ED L
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD 276
Query: 466 DLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTE 515
+L + + C +D RP+ S++ LE + E
Sbjct: 277 ELYE------------------IMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM GSL +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 P-IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLEG--IGEINKSFLAEVKT 286
+E+ K++G G FG V G + G + VA+K L+ + + FL+E
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA 346
+G H N++ L G + +++ EYM NGSLD +L + F + Q ++ I
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIG 126
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG- 405
G+ YL + +H D+ +NIL++ N KV+DFG+S++++ D TT G
Sbjct: 127 SGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 406 -YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE ++ T D++S+G+VM E++
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLEG--IGEINKSFLAEVKT 286
+E+ K++G G FG V G + G + VA+K L+ + + FL+E
Sbjct: 24 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 83
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA 346
+G H N++ L G + +++ EYM NGSLD +L + F + Q ++ I
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIG 141
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG- 405
G+ YL + +H D+ +NIL++ N KV+DFG+S++++ D TT G
Sbjct: 142 SGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 406 -YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE ++ T D++S+G+VM E++
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLEG--IGEINKSFLAEVKT 286
+E+ K++G G FG V G + G + VA+K L+ + + FL+E
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA 346
+G H N++ L G + +++ EYM NGSLD +L + F + Q ++ I
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIG 120
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG- 405
G+ YL + +H D+ +NIL++ N KV+DFG+S++++ D TT G
Sbjct: 121 SGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 406 -YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE ++ T D++S+G+VM E++
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 32/215 (14%)
Query: 244 KMLGKGGFGSVFEGT-----QTDGTKVAVKRL-EGIG-EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +T VA+K L E G + N F+ E + S+ H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L V + MP+G L ++ + D + +L+W + IAKG+ YL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
E ++++H D+ +N+L+ + K+ DFGL++L++ D+ + G + +W+
Sbjct: 134 EE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY----NADGGKMPIKWM 186
Query: 413 S------SIITEKVDIYSFGVVMLEILC-GRKVFD 440
+ T + D++S+GV + E++ G K +D
Sbjct: 187 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 32/215 (14%)
Query: 244 KMLGKGGFGSVFEGT-----QTDGTKVAVKRL-EGIG-EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +T VA+K L E G + N F+ E + S+ H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L V + MP+G L ++ + D + +L+W + IAKG+ YL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
E ++++H D+ +N+L+ + K+ DFGL++L++ D+ + G + +W+
Sbjct: 157 EE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY----NADGGKMPIKWM 209
Query: 413 S------SIITEKVDIYSFGVVMLEILC-GRKVFD 440
+ T + D++S+GV + E++ G K +D
Sbjct: 210 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 16/212 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLEG--IGEINKSFLAEVKT 286
+E+ V +++G G FG V G + G K VA+K L+G + FL+E
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA 346
+G H N++RL G +++ E+M NG+LD +L +F + Q ++ IA
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIA 128
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM----RG 402
G+ YL E +H D+ +NIL++ N KV+DFGLS+ ++++ S T +
Sbjct: 129 SGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 403 TPGYLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE ++ T D +S+G+VM E++
Sbjct: 186 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 40/278 (14%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
K LG G FG V+ G + TKVAVK L+ ++FL E + ++ H LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--------DIAKGLTYLHED 355
++ ++ E+M GSL +L +SDE K++L IA+G+ Y+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFL--KSDE-------GGKVLLPKLIDFSAQIAEGMAYIE-- 126
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-S 414
R+ +H D++ N+L+ + K+ADFGL+++I+ ++ + + APE ++
Sbjct: 127 -RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 415 IITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHS-N 473
T K +++SFG+++ EI+ K+ + + D +S L +
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKI---------------PYPGRTNADVMSALSQGYRMP 230
Query: 474 DMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
M++ +E+ ++MK+ C + +RP+ + VL+
Sbjct: 231 RMENCPDELYDIMKM---CWKEKAEERPTFDYLQSVLD 265
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 16/212 (7%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTK---VAVKRLEG--IGEINKSFLAEVKT 286
+E+ V +++G G FG V G + G K VA+K L+G + FL+E
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA 346
+G H N++RL G +++ E+M NG+LD +L +F + Q ++ IA
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIA 126
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM----RG 402
G+ YL E +H D+ +NIL++ N KV+DFGLS+ ++++ S T +
Sbjct: 127 SGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
Query: 403 TPGYLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE ++ T D +S+G+VM E++
Sbjct: 184 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM G L +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 P-IYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG+G FG V+ GT T+VA+K L+ ++FL E + + + H+ LV+L +E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
+V EYM G L +L ++ L Q + IA G+ Y+ R +H D+
Sbjct: 86 P-IYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYS 424
+ NIL+ N KVADFGL++LI+ ++ + + APE L T K D++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 425 FGVVMLEILCGRKV 438
FG+++ E+ +V
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
LG G G V+ G TKVAVK L+ +FLAE + + HQ LVRL ++
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
++ EYM NGSL +L S L + + IA+G+ ++ E + +H D+
Sbjct: 81 PIYIIT-EYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDIYS 424
+ NIL+ + K+ADFGL++LI+ + + + APE ++ T K D++S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 425 FGVVMLEILCGRKV 438
FG+++ EI+ ++
Sbjct: 196 FGILLTEIVTHGRI 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 8 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 120
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 121 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 178 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 21/218 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 116
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
G + APE L+ S + D++SFGVV+ E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 119
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 35 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 147
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 148 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 204
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 205 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F K LG G FG V G VA+K ++ F+ E K + ++ H+ LV+L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ ++ EYM NG L +L + F QQ ++ D+ + + YL ++
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLES---KQF 126
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP---GYLAPEWL-SSII 416
LH D+ +N L++ KV+DFGLS+ + D+ T+ RG+ + PE L S
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 417 TEKVDIYSFGVVMLEILC-GRKVFDR 441
+ K DI++FGV+M EI G+ ++R
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 21/218 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 3 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 57
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 115
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 116 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
G + APE L+ S + D++SFGVV+ E+
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 24/220 (10%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV------FEGTQTDGTKVAVKRL--EGIGEINK 278
P F LK + D LG+G FG V EG T G +VAVK L E G
Sbjct: 15 PTHFEKRFLKRIRD-----LGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIA 68
Query: 279 SFLAEVKTIGSIHHQNLVRLIGFCAEKSHN--LLVYEYMPNGSLDRWLFQRSDEFMLDWQ 336
E++ + +++H+N+V+ G C E N L+ E++P+GSL +L + ++ L +
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--K 126
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD-QSQ 395
Q+ K + I KG+ YL ++ +H D+ +N+L++ K+ DFGL+K I+ D +
Sbjct: 127 QQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 396 VVTTMRGTPGY-LAPEWL-SSIITEKVDIYSFGVVMLEIL 433
V R +P + APE L S D++SFGV + E+L
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 21/218 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 2 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 56
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 57 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 114
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 115 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
G + APE L+ S + D++SFGVV+ E+
Sbjct: 172 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 21/218 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 116
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
G + APE L+ S + D++SFGVV+ E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F K LG G FG V G VA+K ++ F+ E K + ++ H+ LV+L G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ ++ EYM NG L +L + F QQ ++ D+ + + YL ++
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLES---KQF 141
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEK 419
LH D+ +N L++ KV+DFGLS+ + D+ + + PE L S + K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 420 VDIYSFGVVMLEILC-GRKVFDR 441
DI++FGV+M EI G+ ++R
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 24/220 (10%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV------FEGTQTDGTKVAVKRL--EGIGEINK 278
P F LK + D LG+G FG V EG T G +VAVK L E G
Sbjct: 3 PTHFEKRFLKRIRD-----LGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIA 56
Query: 279 SFLAEVKTIGSIHHQNLVRLIGFCAEKSHN--LLVYEYMPNGSLDRWLFQRSDEFMLDWQ 336
E++ + +++H+N+V+ G C E N L+ E++P+GSL +L + ++ L +
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--K 114
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD-QSQ 395
Q+ K + I KG+ YL ++ +H D+ +N+L++ K+ DFGL+K I+ D +
Sbjct: 115 QQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 396 VVTTMRGTPGY-LAPEWL-SSIITEKVDIYSFGVVMLEIL 433
V R +P + APE L S D++SFGV + E+L
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 10 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 65 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 122
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 123 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 179
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 180 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F K LG G FG V G VA+K ++ F+ E K + ++ H+ LV+L G
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ ++ EYM NG L +L + F QQ ++ D+ + + YL ++
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLES---KQF 125
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEK 419
LH D+ +N L++ KV+DFGLS+ + D+ + + PE L S + K
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 420 VDIYSFGVVMLEILC-GRKVFDR 441
DI++FGV+M EI G+ ++R
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYER 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 21/229 (9%)
Query: 217 EDYLDQVPGLPKRFSFEELKVMTDNFR--KMLGKGGFGSVFE-----GTQTDGTKVAVKR 269
E+ Q PG+ F + +D ++ ++LGKG FG V Q KV KR
Sbjct: 12 ENLYFQGPGM---FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 68
Query: 270 LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD 329
+S L EV+ + + H N+++L F +K + LV E G L + R
Sbjct: 69 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 128
Query: 330 EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDG---NFNAKVADFGLS 386
+D +II + G+TY+H++ KI+H D+KP+N+LL+ + N ++ DFGLS
Sbjct: 129 FSEVD---AARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Query: 387 KLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCG 435
+ S+ + GT Y+APE L EK D++S GV++ +L G
Sbjct: 183 THFEA--SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 9 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 121
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 122 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 179 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 21/218 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L ++ +D +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKL 119
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
G + APE L+ S + D++SFGVV+ E+
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 11 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 123
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 124 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 181 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 29/231 (12%)
Query: 224 PGLPKRFSFEELKVMTDNFR-KMLGKGGFGSVFEGTQTDG-TKVAVKRLE---------- 271
PG+ R +E K+ F+ + LG G +G V + +G ++ A+K ++
Sbjct: 23 PGMYVRK--KEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYS 80
Query: 272 ----GIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR 327
I + ++ E+ + S+ H N+++L +K + LV E+ G L + R
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR 140
Query: 328 SDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGN---FNAKVADFG 384
D I+ I G+ YLH + I+H DIKP+NILL+ N K+ DFG
Sbjct: 141 HK---FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFG 194
Query: 385 LSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCG 435
LS +D + GT Y+APE L EK D++S GV+M +LCG
Sbjct: 195 LSSFFSKDYK--LRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F K LG G FG V G VA+K ++ F+ E K + ++ H+ LV+L G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ ++ EYM NG L +L + F QQ ++ D+ + + YL ++
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLES---KQF 121
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEK 419
LH D+ +N L++ KV+DFGLS+ + D+ + + PE L S + K
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 420 VDIYSFGVVMLEILC-GRKVFDR 441
DI++FGV+M EI G+ ++R
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYER 204
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 221 DQVPGLPKRFSFEELKVMTDNFR--KMLGKGGFGSVFE-----GTQTDGTKVAVKRLEGI 273
D + P F + +D ++ ++LGKG FG V Q KV KR
Sbjct: 7 DHLHATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 66
Query: 274 GEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFML 333
+S L EV+ + + H N+ +L F +K + LV E G L + R +
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 126
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDG---NFNAKVADFGLSKLID 390
D +II + G+TY H + KI+H D+KP+N+LL+ + N ++ DFGLS +
Sbjct: 127 D---AARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 391 QDQSQVVTTMRGTPGYLAPEWLSSIITEKVDIYSFGVVMLEILCG 435
S+ GT Y+APE L EK D++S GV++ +L G
Sbjct: 181 A--SKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F K LG G FG V G VA+K ++ F+ E K + ++ H+ LV+L G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ ++ EYM NG L +L + F QQ ++ D+ + + YL ++
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLES---KQF 141
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEK 419
LH D+ +N L++ KV+DFGLS+ + D+ + + PE L S + K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 420 VDIYSFGVVMLEILC-GRKVFDR 441
DI++FGV+M EI G+ ++R
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYER 224
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
K LG G FG V+ GT TKVA+K L+ +SFL E + + + H LV+L +
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
E+ +V EYM GSL +L + + L + +A G+ Y+ R +H
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDI 422
D++ NIL+ K+ADFGL++LI+ ++ + + APE L T K D+
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 423 YSFGVVMLEILCGRKV 438
+SFG+++ E++ +V
Sbjct: 190 WSFGILLTELVTKGRV 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 35/217 (16%)
Query: 242 FRKMLGKGGFGSVFEG-TQTDGTKV--AVKRLEGIG--EINKSFLAEVKTIGSI-HHQNL 295
F+ ++G+G FG V + + DG ++ A+KR++ + ++ F E++ + + HH N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRKKII 342
+ L+G C + + L EY P+G+L +L S L QQ
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRG 402
D+A+G+ YL + ++ +H D+ +NIL+ N+ AK+ADFGLS+ Q V ++
Sbjct: 149 ADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------GQEV-YVKK 198
Query: 403 TPGYLAPEWLS------SIITEKVDIYSFGVVMLEIL 433
T G L W++ S+ T D++S+GV++ EI+
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 35/217 (16%)
Query: 242 FRKMLGKGGFGSVFEG-TQTDGTKV--AVKRLEGIG--EINKSFLAEVKTIGSI-HHQNL 295
F+ ++G+G FG V + + DG ++ A+KR++ + ++ F E++ + + HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRKKII 342
+ L+G C + + L EY P+G+L +L S L QQ
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRG 402
D+A+G+ YL + ++ +H D+ +NIL+ N+ AK+ADFGLS+ Q V ++
Sbjct: 139 ADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------GQEV-YVKK 188
Query: 403 TPGYLAPEWLS------SIITEKVDIYSFGVVMLEIL 433
T G L W++ S+ T D++S+GV++ EI+
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 7 PTQFEERHLK-----FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ E++P GSL +L + + +D +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKL 119
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F K LG G FG V G VA+K ++ F+ E K + ++ H+ LV+L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ ++ EYM NG L +L + F QQ ++ D+ + + YL ++
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLES---KQF 126
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEK 419
LH D+ +N L++ KV+DFGLS+ + D+ + + PE L S + K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 420 VDIYSFGVVMLEILC-GRKVFDR 441
DI++FGV+M EI G+ ++R
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYER 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEG-TQTDGTK---VAVKRLE-GIGEINK-SFLAEVKT 286
+E+ + +++G G FG V G + G + VA+K L+ G E + FL+E
Sbjct: 28 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 87
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA 346
+G H N++ L G + + +++ E+M NGSLD +L Q +F + Q ++ IA
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIA 145
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
G+ YL + +H D+ +NIL++ N KV+DFGLS+ ++ D S T G
Sbjct: 146 AGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT-SALGGK 201
Query: 407 LAPEWLSS------IITEKVDIYSFGVVMLEIL 433
+ W + T D++S+G+VM E++
Sbjct: 202 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
F K LG G FG V G VA+K ++ F+ E K + ++ H+ LV+L G
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ ++ EYM NG L +L + F QQ ++ D+ + + YL ++
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLES---KQF 132
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEK 419
LH D+ +N L++ KV+DFGLS+ + D+ + + PE L S + K
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 420 VDIYSFGVVMLEILC-GRKVFDR 441
DI++FGV+M EI G+ ++R
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYER 215
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 89
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 147
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 202
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 116
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS--QV 396
+ I KG+ YL ++ +H D+ +NIL++ K+ DFGL+K++ QD+ +V
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 397 VTTMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
+ APE L+ S + D++SFGVV+ E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 158/315 (50%), Gaps = 41/315 (13%)
Query: 220 LDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTDGTK--VAVKRLEG- 272
L Q PG P F LK + D LG+G FG V ++ T DGT VAVK L+
Sbjct: 18 LFQGPGDPTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKAD 71
Query: 273 IGEINKS-FLAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRS- 328
G ++S + E+ + +++H+++++ G C A + LV EY+P GSL +L + S
Sbjct: 72 AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSI 131
Query: 329 --DEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS 386
+ +L QQ I +G+ YLH Q +H D+ +N+LLD + K+ DFGL+
Sbjct: 132 GLAQLLLFAQQ-------ICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Query: 387 KLIDQDQSQVVTTMRG-TPGY-LAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
K + + G +P + APE L D++SFGV + E+L D SQ
Sbjct: 182 KAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQ 238
Query: 444 -PEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNG--EEVVNMMKVAAWCLESDFAKR 500
P + + L+ I + + +L++L+++ + + EV ++MK C E++ + R
Sbjct: 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKN---CWETEASFR 295
Query: 501 PSMSMVVRVLEGVTE 515
P+ ++ +L+ V E
Sbjct: 296 PTFENLIPILKTVHE 310
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 90
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 203
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 204
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 90
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGAKLPVKWM 203
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 86
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 145 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 199
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 204
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 16/204 (7%)
Query: 242 FRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSFLAEVKTIGSIHHQNL 295
F + LGKG FGSV ++ Q + G VAVK+L+ E + + F E++ + S+ H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 296 VRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
V+ G C A + + L+ EY+P GSL +L + + +D + + I KG+ YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL- 148
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG--YLAPEW 411
++ +H D+ +NIL++ K+ DFGL+K++ QD+ G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 412 LS-SIITEKVDIYSFGVVMLEILC 434
L+ S + D++SFGVV+ E+
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 109
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 167
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 168 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 222
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 16/204 (7%)
Query: 242 FRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSFLAEVKTIGSIHHQNL 295
F + LGKG FGSV ++ Q + G VAVK+L+ E + + F E++ + S+ H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 296 VRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
V+ G C A + + L+ EY+P GSL +L + + +D + + I KG+ YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL- 148
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG--YLAPEW 411
++ +H D+ +NIL++ K+ DFGL+K++ QD+ G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 412 LS-SIITEKVDIYSFGVVMLEILC 434
L+ S + D++SFGVV+ E+
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 110
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 169 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 223
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 88
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 146
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 147 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 201
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 22/207 (10%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 83
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL 141
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 142 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 196
Query: 413 ------SSIITEKVDIYSFGVVMLEIL 433
+ T K D++SFGV++ E++
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 23/223 (10%)
Query: 242 FRKMLGKGGFGSV-----FEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLV 296
R+ LG+G FG V ++ Q K ++L +++ E+ + + H +++
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+L + ++V EY G L ++ ++ + + ++ I + Y H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCH--- 125
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII 416
R KI+H D+KP+N+LLD N N K+ADFGLS ++ + T G+P Y APE ++ +
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 417 TE--KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
+VD++S G+V+ +L GR FD D ++ ++FKK
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFD-------DEFIPNLFKK 219
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 107/198 (54%), Gaps = 13/198 (6%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
K LG G FG V+ T TKVAVK ++ ++FLAE + ++ H LV+L
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII---LDIAKGLTYLHEDCRQKI 360
K ++ E+M GSL +L +SDE Q K+I IA+G+ ++ + +
Sbjct: 81 -KEPIYIITEFMAKGSLLDFL--KSDEG--SKQPLPKLIDFSAQIAEGMAFIEQ---RNY 132
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEK 419
+H D++ NIL+ + K+ADFGL+++I+ ++ + + APE ++ T K
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 420 VDIYSFGVVMLEILC-GR 436
D++SFG++++EI+ GR
Sbjct: 193 SDVWSFGILLMEIVTYGR 210
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 37/226 (16%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD------GTKVAVKRLEGIG-EINKS 279
P F LK ++ LGKG FGSV E + D G VAVK+L+ G + +
Sbjct: 1 PTIFEERHLKYISQ-----LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 54
Query: 280 FLAEVKTIGSIHHQNLV--RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
F E++ + ++H +V R + + + LV EY+P+G L D+ Q
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR------------DFLQ 102
Query: 338 RKKIILDIAKGLTYLHEDCR-------QKILHLDIKPQNILLDGNFNAKVADFGLSKLID 390
R + LD ++ L Y + C+ ++ +H D+ +NIL++ + K+ADFGL+KL+
Sbjct: 103 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
Query: 391 QDQSQVVTTMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
D+ V G + APE LS +I + + D++SFGVV+ E+
Sbjct: 163 LDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
K LG G FG V+ T TKVAVK ++ ++FLAE + ++ H LV+L
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII---LDIAKGLTYLHEDCR 357
K ++ E+M GSL +L +SDE Q K+I IA+G+ ++ +
Sbjct: 251 VVT-KEPIYIITEFMAKGSLLDFL--KSDEGSK--QPLPKLIDFSAQIAEGMAFIEQ--- 302
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
+ +H D++ NIL+ + K+ADFGL+++I+ ++ + + APE ++
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 417 TEKVDIYSFGVVMLEILC-GR 436
T K D++SFG++++EI+ GR
Sbjct: 363 TIKSDVWSFGILLMEIVTYGR 383
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 37/229 (16%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD------GTKVAVKRLEGIG-EI 276
P P F LK ++ LGKG FGSV E + D G VAVK+L+ G +
Sbjct: 2 PQDPTIFEERHLKYISQ-----LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPDQ 55
Query: 277 NKSFLAEVKTIGSIHHQNLV--RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD 334
+ F E++ + ++H +V R + + + LV EY+P+G L D
Sbjct: 56 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR------------D 103
Query: 335 WQQRKKIILDIAKGLTYLHEDCR-------QKILHLDIKPQNILLDGNFNAKVADFGLSK 387
+ QR + LD ++ L Y + C+ ++ +H D+ +NIL++ + K+ADFGL+K
Sbjct: 104 FLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK 163
Query: 388 LIDQDQSQVVTTMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
L+ D+ V G + APE LS +I + + D++SFGVV+ E+
Sbjct: 164 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 35/217 (16%)
Query: 242 FRKMLGKGGFGSVFEG-TQTDGTKV--AVKRLEGIG--EINKSFLAEVKTIGSI-HHQNL 295
F+ ++G+G FG V + + DG ++ A+KR++ + ++ F E++ + + HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRKKII 342
+ L+G C + + L EY P+G+L +L S L QQ
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRG 402
D+A+G+ YL + ++ +H ++ +NIL+ N+ AK+ADFGLS+ Q V ++
Sbjct: 146 ADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR------GQEV-YVKK 195
Query: 403 TPGYLAPEWLS------SIITEKVDIYSFGVVMLEIL 433
T G L W++ S+ T D++S+GV++ EI+
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTD-GTKVAVKRLEGIGEIN-KSF 280
P +F LK F + LGKG FGSV ++ Q + G VAVK+L+ E + + F
Sbjct: 5 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 59
Query: 281 LAEVKTIGSIHHQNLVRLIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + S+ H N+V+ G C A + + L+ EY+P GSL +L + + +D +
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 117
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ I KG+ YL ++ +H ++ +NIL++ K+ DFGL+K++ QD+
Sbjct: 118 LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 399 TMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
G + APE L+ S + D++SFGVV+ E+
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 42/306 (13%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 150
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ +L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 209 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWM 263
Query: 413 ------SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
+ T K D++SFGV++ E++ R P D+ I + +L
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL-- 315
Query: 467 LVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMS-MVVRVLEGVTEF--EHNLHYN 523
L ++ D + +V C RPS S +V R+ + F EH +H N
Sbjct: 316 LQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 366
Query: 524 LVHLPI 529
++ +
Sbjct: 367 ATYVNV 372
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 37/226 (16%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD------GTKVAVKRLEGIG-EINKS 279
P F LK ++ LGKG FGSV E + D G VAVK+L+ G + +
Sbjct: 17 PTIFEERHLKYISQ-----LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70
Query: 280 FLAEVKTIGSIHHQNLV--RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
F E++ + ++H +V R + + + LV EY+P+G L D+ Q
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR------------DFLQ 118
Query: 338 RKKIILDIAKGLTYLHEDCR-------QKILHLDIKPQNILLDGNFNAKVADFGLSKLID 390
R + LD ++ L Y + C+ ++ +H D+ +NIL++ + K+ADFGL+KL+
Sbjct: 119 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
Query: 391 QDQSQVVTTMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
D+ V G + APE LS +I + + D++SFGVV+ E+
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 37/226 (16%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD------GTKVAVKRLEGIG-EINKS 279
P F LK ++ LGKG FGSV E + D G VAVK+L+ G + +
Sbjct: 4 PTIFEERHLKYISQ-----LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 57
Query: 280 FLAEVKTIGSIHHQNLV--RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
F E++ + ++H +V R + + + LV EY+P+G L D+ Q
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR------------DFLQ 105
Query: 338 RKKIILDIAKGLTYLHEDCR-------QKILHLDIKPQNILLDGNFNAKVADFGLSKLID 390
R + LD ++ L Y + C+ ++ +H D+ +NIL++ + K+ADFGL+KL+
Sbjct: 106 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
Query: 391 QDQSQVVTTMRGTPG--YLAPEWLS-SIITEKVDIYSFGVVMLEIL 433
D+ V G + APE LS +I + + D++SFGVV+ E+
Sbjct: 166 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 245 MLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSFLAEVKTIGSIH----HQNLVRLI 299
+LGKG F V+ G +VA+K ++ + V+ IH H +++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
+ + ++ LV E NG ++R+L R F + + + I G+ YLH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPF--SENEARHFMHQIITGMLYLHS---HG 132
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
ILH D+ N+LL N N K+ADFGL+ + + T+ GTP Y++PE + S
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY-TLCGTPNYISPEIATRSAHGL 191
Query: 419 KVDIYSFGVVMLEILCGRKVFD 440
+ D++S G + +L GR FD
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 242 FRKMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA-EVKTIGSIHHQNLVRLI 299
F ++LG G F VF Q G A+K ++ S L E+ + I H+N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
+H LV + + G L + +R + + +I + + YLHE+
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---G 126
Query: 360 ILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-I 415
I+H D+KP+N+L + N + DFGLSK+ +Q+ +++T GTPGY+APE L+
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
++ VD +S GV+ +LCG F
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPF 207
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 42/306 (13%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 89
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ +L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL 147
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWM 202
Query: 413 ------SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
+ T K D++SFGV++ E++ R P D+ I + +L
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL-- 254
Query: 467 LVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMS-MVVRVLEGVTEF--EHNLHYN 523
L ++ D + +V C RPS S +V R+ + F EH +H N
Sbjct: 255 LQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 305
Query: 524 LVHLPI 529
++ +
Sbjct: 306 ATYVNV 311
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 42/306 (13%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWM 204
Query: 413 ------SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
+ T K D++SFGV++ E++ R P D+ I + +L
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL-- 256
Query: 467 LVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMS-MVVRVLEGVTEF--EHNLHYN 523
L ++ D + +V C RPS S +V R+ + F EH +H N
Sbjct: 257 LQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 307
Query: 524 LVHLPI 529
++ +
Sbjct: 308 ATYVNV 313
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 42/306 (13%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 96
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ +L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWM 209
Query: 413 ------SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
+ T K D++SFGV++ E++ R P D+ I + +L
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL-- 261
Query: 467 LVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMS-MVVRVLEGVTEF--EHNLHYN 523
L ++ D + +V C RPS S +V R+ + F EH +H N
Sbjct: 262 LQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 312
Query: 524 LVHLPI 529
++ +
Sbjct: 313 ATYVNV 318
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 42/306 (13%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 92
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ +L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWM 205
Query: 413 ------SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
+ T K D++SFGV++ E++ R P D+ I + +L
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL-- 257
Query: 467 LVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMS-MVVRVLEGVTEF--EHNLHYN 523
L ++ D + +V C RPS S +V R+ + F EH +H N
Sbjct: 258 LQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 308
Query: 524 LVHLPI 529
++ +
Sbjct: 309 ATYVNV 314
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVFEG-TQTDGTK---VAVKRLE-GIGEINK-SFLAEVKT 286
+E+ + +++G G FG V G + G + VA+K L+ G E + FL+E
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA 346
+G H N++ L G + + +++ E+M NGSLD +L Q +F + Q ++ IA
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIA 119
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
G+ YL + +H + +NIL++ N KV+DFGLS+ ++ D S T G
Sbjct: 120 AGMKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT-SALGGK 175
Query: 407 LAPEWLSS------IITEKVDIYSFGVVMLEIL 433
+ W + T D++S+G+VM E++
Sbjct: 176 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 42/306 (13%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 91
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWM 204
Query: 413 ------SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
+ T K D++SFGV++ E++ R P D+ I + +L
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL-- 256
Query: 467 LVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMS-MVVRVLEGVTEF--EHNLHYN 523
L ++ D + +V C RPS S +V R+ + F EH +H N
Sbjct: 257 LQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 307
Query: 524 LVHLPI 529
++ +
Sbjct: 308 ATYVNV 313
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 42/306 (13%)
Query: 241 NFRKMLGKGGFGSVFEGT--QTDGTKV--AVK---RLEGIGEINKSFLAEVKTIGSIHHQ 293
+F +++G+G FG V+ GT DG K+ AVK R+ IGE+++ FL E + H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHP 92
Query: 294 NLVRLIGFCAEKSHN-LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
N++ L+G C + L+V YM +G L F R++ + L +AKG+ +L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+K +H D+ +N +LD F KVADFGL++ D + + T L +W+
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMLDKEFDSVHNKTGAKLPVKWM 205
Query: 413 ------SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
+ T K D++SFGV++ E++ R P D+ I + +L
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL-- 257
Query: 467 LVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMS-MVVRVLEGVTEF--EHNLHYN 523
L ++ D + +V C RPS S +V R+ + F EH +H N
Sbjct: 258 LQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 308
Query: 524 LVHLPI 529
++ +
Sbjct: 309 ATYVNV 314
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK-----SFLAEVKTIGSIHHQNLVRL 298
+ LGKG FG+V+ + + ++ +I K E++ +HH N++RL
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
+ ++ L+ EY P G L + L Q+S F D Q+ I+ ++A L Y H +
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKEL-QKSCTF--DEQRTATIMEELADALMYCHG---K 142
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-T 417
K++H DIKP+N+LL K+ADFG S S TM GT YL PE + +
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
EKVD++ GV+ E+L G F+ + E
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 18/215 (8%)
Query: 230 FSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGS 289
+ +ELK++ + +GKG FG V G G KVAVK ++ ++FLAE +
Sbjct: 9 LNMKELKLL-----QTIGKGEFGDVMLG-DYRGNKVAVKCIKN-DATAQAFLAEASVMTQ 61
Query: 290 IHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKG 348
+ H NLV+L+G E+ L +V EYM GSL +L R +L K LD+ +
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEA 120
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
+ YL + +H D+ +N+L+ + AKV+DFGL+K + S T + + A
Sbjct: 121 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTA 173
Query: 409 PEWL-SSIITEKVDIYSFGVVMLEILC-GRKVFDR 441
PE L + + K D++SFG+++ EI GR + R
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 245 MLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIG 300
MLGKG FG V + + + AVK + NK + L EV+ + + H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+ S +V E G L + +R +II + G+TY+H + I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHNI 142
Query: 361 LHLDIKPQNILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMR---GTPGYLAPEWLSS 414
+H D+KP+NILL+ + + K+ DFGLS Q+ T M+ GT Y+APE L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-----TKMKDRIGTAYYIAPEVLRG 197
Query: 415 IITEKVDIYSFGVVMLEILCGRKVF 439
EK D++S GV++ +L G F
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 236 KVMTDNFRKM--LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIG 288
K++ + ++ + LG GG +V+ T KVA+K + E K F EV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 289 SIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDI 345
+ HQN+V +I E LV EY+ +L ++ S + +++ + ILD
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQ---ILD- 122
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
G+ + H+ +I+H DIKPQNIL+D N K+ DFG++K + + + GT
Sbjct: 123 --GIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 406 YLAPEWLSSIITEK-VDIYSFGVVMLEILCGRKVFD 440
Y +PE T++ DIYS G+V+ E+L G F+
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 18/215 (8%)
Query: 230 FSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGS 289
+ +ELK++ + +GKG FG V G G KVAVK ++ ++FLAE +
Sbjct: 190 LNMKELKLL-----QTIGKGEFGDVMLG-DYRGNKVAVKCIKN-DATAQAFLAEASVMTQ 242
Query: 290 IHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKG 348
+ H NLV+L+G E+ L +V EYM GSL +L R +L K LD+ +
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEA 301
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
+ YL + +H D+ +N+L+ + AKV+DFGL+K + S T + + A
Sbjct: 302 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTA 354
Query: 409 PEWL-SSIITEKVDIYSFGVVMLEILC-GRKVFDR 441
PE L + K D++SFG+++ EI GR + R
Sbjct: 355 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK-VAVKRL--EGIGEINKSFLAE 283
P+ E+++ + D FR +LG G F V K VA+K + E + S E
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL 343
+ + I H N+V L H L+ + + G L + ++ + ++I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIF 123
Query: 344 DIAKGLTYLHEDCRQKILHLDIKPQNIL---LDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ + YLH+ I+H D+KP+N+L LD + ++DFGLSK+ +D V++T
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 401 RGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
GTPGY+APE L+ ++ VD +S GV+ +LCG F
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 245 MLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIG 300
MLGKG FG V + + + AVK + NK + L EV+ + + H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+ S +V E G L + +R +II + G+TY+H + I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHNI 142
Query: 361 LHLDIKPQNILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMR---GTPGYLAPEWLSS 414
+H D+KP+NILL+ + + K+ DFGLS Q+ T M+ GT Y+APE L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-----TKMKDRIGTAYYIAPEVLRG 197
Query: 415 IITEKVDIYSFGVVMLEILCGRKVF 439
EK D++S GV++ +L G F
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRL-----EGIGEINKSFLAEVKTIGSIHHQNL 295
+++G GGFG V+ G +VAVK E I + ++ E K + H N+
Sbjct: 10 TLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR--SDEFMLDWQQRKKIILDIAKGLTYLH 353
+ L G C ++ + LV E+ G L+R L + + +++W + IA+G+ YLH
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA------VQIARGMNYLH 122
Query: 354 EDCRQKILHLDIKPQNILL-----DGNFN---AKVADFGLSKLIDQDQSQVVTTMRGTPG 405
++ I+H D+K NIL+ +G+ + K+ DFGL++ + + G
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYA 179
Query: 406 YLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVF 439
++APE + +S+ ++ D++S+GV++ E+L G F
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 245 MLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIG 300
MLGKG FG V + + + AVK + NK + L EV+ + + H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+ S +V E G L + +R +II + G+TY+H + I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHNI 142
Query: 361 LHLDIKPQNILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMR---GTPGYLAPEWLSS 414
+H D+KP+NILL+ + + K+ DFGLS Q+ T M+ GT Y+APE L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-----TKMKDRIGTAYYIAPEVLRG 197
Query: 415 IITEKVDIYSFGVVMLEILCGRKVF 439
EK D++S GV++ +L G F
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 52/236 (22%)
Query: 232 FEELKVMTDNFRKMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLAEVKTIGSI 290
FEE+ V LG+G FG V + D A+K++ E + L+EV + S+
Sbjct: 8 FEEIAV--------LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL 59
Query: 291 HHQ-------------NLVRLIGFCAEKSHNLLVYEYMPNGSL-----DRWLFQRSDEFM 332
+HQ N V+ + +KS + EY NG+L L Q+ DE+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY- 118
Query: 333 LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD 392
W+ ++I+ + L+Y+H Q I+H D+KP NI +D + N K+ DFGL+K + +
Sbjct: 119 --WRLFRQIL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 393 -------------QSQVVTTMRGTPGYLAPEWLSSI--ITEKVDIYSFGVVMLEIL 433
S +T+ GT Y+A E L EK+D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 22/223 (9%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK------VAVKRLEGIGEINKSF 280
P+ E+++ + D FR +LG G F V K +A K LEG S
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK---EGSM 63
Query: 281 LAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKK 340
E+ + I H N+V L H L+ + + G L + ++ F + + +
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTE-RDASR 120
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNIL---LDGNFNAKVADFGLSKLIDQDQSQVV 397
+I + + YLH+ I+H D+KP+N+L LD + ++DFGLSK+ +D V+
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVL 175
Query: 398 TTMRGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
+T GTPGY+APE L+ ++ VD +S GV+ +LCG F
Sbjct: 176 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 16/220 (7%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK-VAVKRL--EGIGEINKSFLAE 283
P+ E+++ + D FR +LG G F V K VA+K + E + S E
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL 343
+ + I H N+V L H L+ + + G L + ++ F + + ++I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTE-RDASRLIF 123
Query: 344 DIAKGLTYLHEDCRQKILHLDIKPQNIL---LDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ + YLH+ I+H D+KP+N+L LD + ++DFGLSK+ +D V++T
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 401 RGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
GTPGY+APE L+ ++ VD +S GV+ +LCG F
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 18/215 (8%)
Query: 230 FSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGS 289
+ +ELK++ + +GKG FG V G G KVAVK ++ ++FLAE +
Sbjct: 3 LNMKELKLL-----QTIGKGEFGDVMLG-DYRGNKVAVKCIKN-DATAQAFLAEASVMTQ 55
Query: 290 IHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKG 348
+ H NLV+L+G E+ L +V EYM GSL +L R +L K LD+ +
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEA 114
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
+ YL + +H D+ +N+L+ + AKV+DFGL+K + S T + + A
Sbjct: 115 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTA 167
Query: 409 PEWL-SSIITEKVDIYSFGVVMLEILC-GRKVFDR 441
PE L + K D++SFG+++ EI GR + R
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 7/209 (3%)
Query: 234 ELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQ 293
ELK K LG G FG V G VAVK ++ F E +T+ + H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
LV+ G C+++ +V EY+ NG L +L RS L+ Q ++ D+ +G+ +L
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLE 121
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ +H D+ +N L+D + KV+DFG+++ + DQ + + APE
Sbjct: 122 S---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFH 178
Query: 414 SI-ITEKVDIYSFGVVMLEILC-GRKVFD 440
+ K D+++FG++M E+ G+ +D
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 16/220 (7%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK-VAVKRL--EGIGEINKSFLAE 283
P+ E+++ + D FR +LG G F V K VA+K + E + S E
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL 343
+ + I H N+V L H L+ + + G L + ++ F + + ++I
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTE-RDASRLIF 123
Query: 344 DIAKGLTYLHEDCRQKILHLDIKPQNIL---LDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ + YLH+ I+H D+KP+N+L LD + ++DFGLSK+ +D V++T
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 401 RGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
GTPGY+APE L+ ++ VD +S GV+ +LCG F
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 18/215 (8%)
Query: 230 FSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGS 289
+ +ELK++ + +GKG FG V G G KVAVK ++ ++FLAE +
Sbjct: 18 LNMKELKLL-----QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQ 70
Query: 290 IHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKG 348
+ H NLV+L+G E+ L +V EYM GSL +L R +L K LD+ +
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEA 129
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
+ YL + +H D+ +N+L+ + AKV+DFGL+K + S T + + A
Sbjct: 130 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTA 182
Query: 409 PEWL-SSIITEKVDIYSFGVVMLEILC-GRKVFDR 441
PE L + K D++SFG+++ EI GR + R
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 226 LPKR-FSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEINK 278
+PKR F+ ++ ++ + LGKG FG+V+ + KV K +LE G +
Sbjct: 6 MPKRKFTIDDFDIV-----RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEH 59
Query: 279 SFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
E++ + H N++R+ + ++ L+ E+ P G L + L Q+ F D Q+
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRF--DEQRS 116
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ ++A L Y HE +K++H DIKP+N+L+ K+ADFG S S
Sbjct: 117 ATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRR 170
Query: 399 TMRGTPGYLAPEWLSSII-TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI--- 454
M GT YL PE + EKVD++ GV+ E L G FD E ++++
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
Query: 455 ---FKKKAEEDKLSDLVDKH 471
F +D +S L+ H
Sbjct: 231 FPPFLSDGSKDLISKLLRYH 250
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK------VAVKRLEGIGEINK--SFLAEVKTIGSI-H 291
+F K LG G FG V E T K VAVK L+ + + + ++E+K + + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD---------------WQ 336
H N+V L+G C L++ EY G L +L ++ D F+ +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
+AKG+ +L + +H D+ +NILL K+ DFGL++ I D + V
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 397 VTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
V P ++APE + + + T + D++S+G+ + E+ F M + S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSK 279
Query: 455 FKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
F K +E L +H+ E+ ++MK C ++D KRP+ +V+++E
Sbjct: 280 FYKMIKEG-FRMLSPEHAP------AEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 31/261 (11%)
Query: 226 LPKRFSFEELKVMTDNFR--KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEIN 277
+PKR K D+F + LGKG FG+V+ + KV K +LE G +
Sbjct: 6 MPKR------KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VE 58
Query: 278 KSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
E++ + H N++R+ + ++ L+ E+ P G L + L Q+ F D Q+
Sbjct: 59 HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRF--DEQR 115
Query: 338 RKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVV 397
+ ++A L Y HE +K++H DIKP+N+L+ K+ADFG S S
Sbjct: 116 SATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRR 169
Query: 398 TTMRGTPGYLAPEWLSSII-TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI-- 454
M GT YL PE + EKVD++ GV+ E L G FD E ++++
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL 229
Query: 455 ----FKKKAEEDKLSDLVDKH 471
F +D +S L+ H
Sbjct: 230 KFPPFLSDGSKDLISKLLRYH 250
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 31/261 (11%)
Query: 226 LPKRFSFEELKVMTDNFR--KMLGKGGFGSVFEGTQTD-----GTKVAVK-RLEGIGEIN 277
+PKR K D+F + LGKG FG+V+ + KV K +LE G +
Sbjct: 7 MPKR------KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VE 59
Query: 278 KSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
E++ + H N++R+ + ++ L+ E+ P G L + L Q+ F D Q+
Sbjct: 60 HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRF--DEQR 116
Query: 338 RKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVV 397
+ ++A L Y HE +K++H DIKP+N+L+ K+ADFG S S
Sbjct: 117 SATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRR 170
Query: 398 TTMRGTPGYLAPEWLSSII-TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI-- 454
M GT YL PE + EKVD++ GV+ E L G FD E ++++
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL 230
Query: 455 ----FKKKAEEDKLSDLVDKH 471
F +D +S L+ H
Sbjct: 231 KFPPFLSDGSKDLISKLLRYH 251
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 21/227 (9%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVK--RLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFC 302
LG G + +V++G +T G VA+K +L+ + + E+ + + H+N+VRL
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRS---DEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
++ LV+E+M N L +++ R+ L+ K + +GL + HE+ K
Sbjct: 73 HTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---K 128
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAPEWL--S 413
ILH D+KPQN+L++ K+ DFGL++ ++ S+VVT Y AP+ L S
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW-----YRAPDVLMGS 183
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAE 460
+ +DI+S G ++ E++ G+ +F + EE+ + I E
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 81 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 134 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 135 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 91 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 143
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 144 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK------VAVKRLEGIGEINK--SFLAEVKTIGSI-H 291
+F K LG G FG V E T K VAVK L+ + + + ++E+K + + +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD---------------WQ 336
H N+V L+G C L++ EY G L +L ++ D F+ +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
+AKG+ +L + +H D+ +NILL K+ DFGL++ I D + V
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 397 VTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
V P ++APE + + + T + D++S+G+ + E+ F M + S
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSK 256
Query: 455 FKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
F K +E L +H+ E+ ++MK C ++D KRP+ +V+++E
Sbjct: 257 FYKMIKEG-FRMLSPEHAP------AEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 135 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 136 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 134 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 127
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 128 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 84 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 137 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 87 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 139
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 140 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 196
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 138 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 137 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 106 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 158
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 159 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 215
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 134 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 241 NFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
+ LG G +G V+ G + VAVK L+ + FL E + I H NLV+L+
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
G C + +V EYMP G+L +L + + E + ++L +A ++ E +K
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-----EVTAVVLLYMATQISSAMEYLEKK 149
Query: 360 -ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIIT 417
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 418 EKVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 210 IKSDVWAFGVLLWEI 224
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK------VAVKRLEGIGEINK--SFLAEVKTIGSI-H 291
+F K LG G FG V E T K VAVK L+ + + + ++E+K + + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD---------------WQ 336
H N+V L+G C L++ EY G L +L ++ D F+ +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
+AKG+ +L + +H D+ +NILL K+ DFGL++ I D + V
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 397 VTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
V P ++APE + + + T + D++S+G+ + E+ F M + S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSK 279
Query: 455 FKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
F K +E L +H+ E+ ++MK C ++D KRP+ +V+++E
Sbjct: 280 FYKMIKEG-FRMLSPEHAP------AEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 136 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK------VAVKRLEGIGEINK--SFLAEVKTIGSI-H 291
+F K LG G FG V E T K VAVK L+ + + + ++E+K + + +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD---------------WQ 336
H N+V L+G C L++ EY G L +L ++ D F+ +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
+AKG+ +L + +H D+ +NILL K+ DFGL++ I D + V
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 397 VTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
V P ++APE + + + T + D++S+G+ + E+ F M + S
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSK 274
Query: 455 FKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
F K +E L +H+ E+ ++MK C ++D KRP+ +V+++E
Sbjct: 275 FYKMIKEG-FRMLSPEHA------PAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 321
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 242 FRKMLGKGGFGSVFEGTQTD-GTKVAVK--RLEGIGEINKSFLAEVKTIGSIHHQNLVRL 298
++ LG GGFG V D G +VA+K R E + + + E++ + ++H N+V
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 299 ------IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
+ A LL EY G L ++L Q + L + ++ DI+ L YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 353 HEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAP 409
HE+ +I+H D+KP+NI+L K+ D G +K + DQ ++ T GT YLAP
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYLAP 192
Query: 410 EWL-SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L T VD +SFG + E + G + F
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 137 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 137 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 141 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK------VAVKRLEGIGEINK--SFLAEVKTIGSI-H 291
+F K LG G FG V E T K VAVK L+ + + + ++E+K + + +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD---------------WQ 336
H N+V L+G C L++ EY G L +L ++ D F+ +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 337 QRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
+AKG+ +L + +H D+ +NILL K+ DFGL++ I D + V
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 397 VTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
V P ++APE + + + T + D++S+G+ + E+ F M + S
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSK 272
Query: 455 FKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
F K +E L +H+ E+ ++MK C ++D KRP+ +V+++E
Sbjct: 273 FYKMIKEG-FRMLSPEHA------PAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 319
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 242 FRKMLGKGGFGSVFEGTQTD-GTKVAVK--RLEGIGEINKSFLAEVKTIGSIHHQNLVRL 298
++ LG GGFG V D G +VA+K R E + + + E++ + ++H N+V
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 299 ------IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
+ A LL EY G L ++L Q + L + ++ DI+ L YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 353 HEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAP 409
HE+ +I+H D+KP+NI+L K+ D G +K + DQ ++ T GT YLAP
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYLAP 193
Query: 410 EWL-SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L T VD +SFG + E + G + F
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 134 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 47/279 (16%)
Query: 245 MLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG--- 300
++G GGFG VF+ + DG ++R + N+ EVK + + H N+V G
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRR---VKYNNEKAEREVKALAKLDHVNIVHYNGCWD 75
Query: 301 -----------------FCAEKSHN---------LLVYEYMPNGSLDRWLFQRSDEFMLD 334
+ E S N + E+ G+L++W+ +R E LD
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLD 134
Query: 335 WQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS 394
++ I KG+ Y+H +K++H D+KP NI L K+ DFGL + D
Sbjct: 135 KVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 191
Query: 395 QVVTTMRGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEIL--CGRKVFDRSQ--PEEEDM 449
+ T +GT Y++PE +SS ++VD+Y+ G+++ E+L C F+ S+ + D
Sbjct: 192 R--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD-TAFETSKFFTDLRDG 248
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKV 488
+ IF KK E+ L L+ K D + N E++ + V
Sbjct: 249 IISDIFDKK-EKTLLQKLLSKKPED-RPNTSEILRTLTV 285
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 52/236 (22%)
Query: 232 FEELKVMTDNFRKMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLAEVKTIGSI 290
FEE+ V LG+G FG V + D A+K++ E + L+EV + S+
Sbjct: 8 FEEIAV--------LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL 59
Query: 291 HHQ-------------NLVRLIGFCAEKSHNLLVYEYMPNGSL-----DRWLFQRSDEFM 332
+HQ N V+ + +KS + EY N +L L Q+ DE+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY- 118
Query: 333 LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD 392
W+ ++I+ + L+Y+H Q I+H D+KP NI +D + N K+ DFGL+K + +
Sbjct: 119 --WRLFRQIL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 393 -------------QSQVVTTMRGTPGYLAPEWLSSI--ITEKVDIYSFGVVMLEIL 433
S +T+ GT Y+A E L EK+D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 111/211 (52%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKVAVK------RLEGIGEINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV + R + NK L E + S+ + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 115 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 167
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 168 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 224
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G FG V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 129
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 154/308 (50%), Gaps = 41/308 (13%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTDGTK--VAVKRLEG-IGEINKS 279
P F LK + D LG+G FG V ++ T DGT VAVK L+ G ++S
Sbjct: 8 PTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRS 61
Query: 280 -FLAEVKTIGSIHHQNLVRLIGFCAEKSHN--LLVYEYMPNGSLDRWLFQRS---DEFML 333
+ E+ + +++H+++++ G C ++ LV EY+P GSL +L + S + +L
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL 121
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQ 393
QQ I +G+ YLH Q +H ++ +N+LLD + K+ DFGL+K + +
Sbjct: 122 FAQQ-------ICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
Query: 394 SQVVTTMRG-TPGY-LAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQ-PEEEDM 449
G +P + APE L D++SFGV + E+L D SQ P + +
Sbjct: 172 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFL 228
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSNG--EEVVNMMKVAAWCLESDFAKRPSMSMVV 507
L+ I + + +L++L+++ + + EV ++MK C E++ + RP+ ++
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKN---CWETEASFRPTFENLI 285
Query: 508 RVLEGVTE 515
+L+ V E
Sbjct: 286 PILKTVHE 293
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVRLIGFC 302
LG+GGFG VFE + D A+KR+ + + EVK + + H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDW-------QQRKK-----IILDIAKGLT 350
EK+ + P L + E + DW ++R++ I L IA+ +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQ--VVTTMR------- 401
+LH + ++H D+KP NI + KV DFGL +DQD+ + V+T M
Sbjct: 133 FLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 402 --GTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
GT Y++PE + + + KVDI+S G+++ E+L
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 154/308 (50%), Gaps = 41/308 (13%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTDGTK--VAVKRLEG-IGEINKS 279
P F LK + D LG+G FG V ++ T DGT VAVK L+ G ++S
Sbjct: 8 PTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRS 61
Query: 280 -FLAEVKTIGSIHHQNLVRLIGFCAEKSHN--LLVYEYMPNGSLDRWLFQRS---DEFML 333
+ E+ + +++H+++++ G C ++ LV EY+P GSL +L + S + +L
Sbjct: 62 GWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL 121
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQ 393
QQ I +G+ YLH Q +H ++ +N+LLD + K+ DFGL+K + +
Sbjct: 122 FAQQ-------ICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
Query: 394 SQVVTTMRG-TPGY-LAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQ-PEEEDM 449
G +P + APE L D++SFGV + E+L D SQ P + +
Sbjct: 172 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFL 228
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSNG--EEVVNMMKVAAWCLESDFAKRPSMSMVV 507
L+ I + + +L++L+++ + + EV ++MK C E++ + RP+ ++
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKN---CWETEASFRPTFENLI 285
Query: 508 RVLEGVTE 515
+L+ V E
Sbjct: 286 PILKTVHE 293
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 225 GLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAE 283
G+ + E++ + LG G +G V+EG + VAVK L+ + FL E
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL 343
+ I H NLV+L+G C + ++ E+M G+L +L + + Q+ ++L
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVL 114
Query: 344 -----DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
I+ + YL ++ +H D+ +N L+ N KVADFGLS+L+ D
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 171
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEI 432
+ + APE L+ + + K D+++FGV++ EI
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 242 FRKMLGKGGFGSVFEGT-----QTDGT-KVAVKRLEGIGEINK--SFLAEVKTIGSI-HH 292
F K LG G FG V E T + D KVAVK L+ ++ + ++E+K + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--------D 344
+N+V L+G C L++ EY G L +L +R E LD + + + L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP 404
+A+G+ +L + +H D+ +N+LL AK+ DFGL++ I D + +V P
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 405 -GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
++APE + + T + D++S+G+++ EI
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIF 256
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 242 FRKMLGKGGFGSVFEGT-----QTDGT-KVAVKRLEGIGEINK--SFLAEVKTIGSI-HH 292
F K LG G FG V E T + D KVAVK L+ ++ + ++E+K + + H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--------D 344
+N+V L+G C L++ EY G L +L +R E LD + + + L
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP 404
+A+G+ +L + +H D+ +N+LL AK+ DFGL++ I D + +V P
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 405 -GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
++APE + + T + D++S+G+++ EI
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIF 248
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 245 MLGKGGFGSVFEGTQTD-GTKVAVKR-LEGIGE--INKSFLAEVKTIGSIHHQNLVRLIG 300
++G+G +G V + D G VA+K+ LE + + K + E+K + + H+NLV L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 301 FCAEKSHNLLVYEYMPNGSLDRW-LFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
C +K LV+E++ + LD LF LD+Q +K + I G+ + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHS---HN 144
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIIT-- 417
I+H DIKP+NIL+ + K+ DFG ++ + +V T Y APE L +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 418 EKVDIYSFGVVMLEILCGRKVF 439
+ VD+++ G ++ E+ G +F
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLF 225
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 244 KMLGKGGFGSVFEGTQTDGTK----VAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
+++GKG FG V+ G D + A+K L I E+ + +FL E + ++H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 298 LIGFCAEK---SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
LIG H LL YM +G L + F RS + + L +A+G+ YL E
Sbjct: 87 LIGIMLPPEGLPHVLL--PYMCHGDLLQ--FIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEW--L 412
QK +H D+ +N +LD +F KVADFGL++ I + V R L +W L
Sbjct: 143 ---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH--ARLPVKWTAL 197
Query: 413 SSI----ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLV 468
S+ T K D++SFGV++ E+L R P + + A+ +L
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLT------RGAPPYRHIDPFDLTHFLAQGRRLPQ-- 249
Query: 469 DKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFEHNLHYNLVHLP 528
++ D ++ +V C E+D A RP+ ++V +E + HY V LP
Sbjct: 250 PEYCPD---------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY--VQLP 298
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 10/193 (5%)
Query: 244 KMLGKGGFGSVFEGT-QTDGTKVAVK--RLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+ +G+G FG VF G + D T VAVK R ++ FL E + + H N+VRLIG
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C +K +V E + G D F R++ L + +++ D A G+ YL C
Sbjct: 180 VCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPEWLS-SIITE 418
+H D+ +N L+ K++DFG+S+ +R P + APE L+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 419 KVDIYSFGVVMLE 431
+ D++SFG+++ E
Sbjct: 295 ESDVWSFGILLWE 307
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IA+G+ YL
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYL 130
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 131 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 193 KSDVWAFGVLLWEI 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 129
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFG +KL+ ++ + P ++A E
Sbjct: 138 ED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFG +KL+ ++ + P ++A E
Sbjct: 136 ED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 34/266 (12%)
Query: 245 MLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG--- 300
++G GGFG VF+ + DG +KR++ N+ EVK + + H N+V G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAEREVKALAKLDHVNIVHYNGCWD 74
Query: 301 ---FCAEKSHN----------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK 347
+ E S + E+ G+L++W+ +R E LD ++ I K
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQITK 133
Query: 348 GLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYL 407
G+ Y+H +K+++ D+KP NI L K+ DFGL + D + + +GT Y+
Sbjct: 134 GVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTLRYM 188
Query: 408 APEWLSSI-ITEKVDIYSFGVVMLEIL--CGRKVFDRSQ--PEEEDMYLLSIFKKKAEED 462
+PE +SS ++VD+Y+ G+++ E+L C F+ S+ + D + IF KK E+
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELLHVCD-TAFETSKFFTDLRDGIISDIFDKK-EKT 246
Query: 463 KLSDLVDKHSNDMQSNGEEVVNMMKV 488
L L+ K D + N E++ + V
Sbjct: 247 LLQKLLSKKPED-RPNTSEILRTLTV 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 135
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 196 KSDVWAFGVLLWEI 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 136
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 10/193 (5%)
Query: 244 KMLGKGGFGSVFEGT-QTDGTKVAVK--RLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+ +G+G FG VF G + D T VAVK R ++ FL E + + H N+VRLIG
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C +K +V E + G D F R++ L + +++ D A G+ YL C
Sbjct: 180 VCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPEWLS-SIITE 418
+H D+ +N L+ K++DFG+S+ +R P + APE L+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 419 KVDIYSFGVVMLE 431
+ D++SFG+++ E
Sbjct: 295 ESDVWSFGILLWE 307
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFG +KL+ ++ + P ++A E
Sbjct: 136 ED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFG +KL+ ++ + P ++A E
Sbjct: 134 ED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFG +KL+ ++ + P ++A E
Sbjct: 136 ED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+L G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 134 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRE------CNRQEVNAVVLLYMATQISSAMEYLE---KKN 144
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 205 KSDVWAFGVLLWEI 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 245 MLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQN 294
LGKGGF FE + D +V ++ + KS L E+ S+ HQ+
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKI-----VPKSLLLKPHQREKMSMEISIHRSLAHQH 82
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V GF + +V E SL +R L + + + I G YLH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH- 138
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS 414
R +++H D+K N+ L+ + K+ DFGL+ ++ D + T+ GTP Y+APE LS
Sbjct: 139 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPEVLSK 195
Query: 415 I-ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ +VD++S G +M +L G+ F+ S
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 245 MLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQN 294
LGKGGF FE + D +V ++ + KS L E+ S+ HQ+
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKI-----VPKSLLLKPHQREKMSMEISIHRSLAHQH 78
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V GF + +V E SL +R L + + + I G YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH- 134
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS 414
R +++H D+K N+ L+ + K+ DFGL+ ++ D + T+ GTP Y+APE LS
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPEVLSK 191
Query: 415 I-ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ +VD++S G +M +L G+ F+ S
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+L G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L++ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 88 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 141 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 241 NFRKMLGKGGFGSVFE----GTQTDGT--KVAVKRLE--GIGEINKSFLAEVKTIGSI-H 291
N K LG+G FG V E G T VAVK L+ +++ ++E+K + I H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 292 HQNLVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML---------DWQQRKKI 341
H N+V L+G C + L+V E+ G+L +L + +EF+ D+ + +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 342 I---LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
I +AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 399 TMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR---- 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 437 ---KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 245 MLGKGGFGSVFEGTQTDGTK-VAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVR 297
LG+G F +V++ + + VA+K++ E IN++ L E+K + + H N++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L+ KS+ LV+++M D + + + +L K +L +GL YLH+
Sbjct: 77 LLDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS----QVVTTMRGTPGYLAPEWL- 412
ILH D+KP N+LLD N K+ADFGL+K QVVT Y APE L
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-----YRAPELLF 185
Query: 413 -SSIITEKVDIYSFGVVMLEIL 433
+ + VD+++ G ++ E+L
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 245 MLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQN 294
LGKGGF FE + D +V ++ + KS L E+ S+ HQ+
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKI-----VPKSLLLKPHQREKMSMEISIHRSLAHQH 78
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V GF + +V E SL +R L + + + I G YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH- 134
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS 414
R +++H D+K N+ L+ + K+ DFGL+ ++ D + T+ GTP Y+APE LS
Sbjct: 135 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPEVLSK 191
Query: 415 I-ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ +VD++S G +M +L G+ F+ S
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+L G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFGL+KL+ ++ + P ++A E
Sbjct: 141 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKV----AVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G +G KV A+K L + NK L E + S+ + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD----EFMLDWQQRKKIILDIAKGLTYL 352
RL+G C + L+ + MP G L ++ + D +++L+W + IAKG+ YL
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE- 410
+ ++++H D+ +N+L+ + K+ DFG +KL+ ++ + P ++A E
Sbjct: 141 ED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 411 WLSSIITEKVDIYSFGVVMLEILC-GRKVFD 440
L I T + D++S+GV + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG G +G V+EG + VAVK L+ + FL E + I H NLV+L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-----DIAKGLTYLHEDCRQK 359
+ ++ E+M G+L +L + + Q+ ++L I+ + YL ++
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE------CNRQEVSAVVLLYMATQISSAMEYLE---KKN 129
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITE 418
+H D+ +N L+ N KVADFGLS+L+ D + + APE L+ + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 419 KVDIYSFGVVMLEI 432
K D+++FGV++ EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 112/215 (52%), Gaps = 26/215 (12%)
Query: 238 MTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHH 292
+ + ++K+ +G+G +G V++ + G VA+KR+ E I + + E+ + +HH
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQ--QRKKIILDIAKGLT 350
N+V LI + LV+E+M ++ L + DE Q Q K + + +G+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGY 406
+ H+ +ILH D+KPQN+L++ + K+ADFGL++ + +VVT Y
Sbjct: 134 HCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----Y 185
Query: 407 LAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
AP+ L S + VDI+S G + E++ G+ +F
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 246 LGKGGFGSVFE-GTQTDGTKVAVKRLE--GIGEINKSFL-AEVKTIGSIHHQNLVRLIGF 301
+G G +G + ++DG + K L+ + E K L +EV + + H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 302 CAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQ 358
++++ L V EY G L + + + E LD ++ +L + LT ++C +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD----EEFVLRVMTQLTLALKECHR 129
Query: 359 K------ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+ +LH D+KP N+ LDG N K+ DFGL+++++ D S T GTP Y++PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKTFVGTPYYMSPEQM 188
Query: 413 SSI-ITEKVDIYSFGVVMLEILCG 435
+ + EK DI+S G ++ E LC
Sbjct: 189 NRMSYNEKSDIWSLGCLLYE-LCA 211
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 47/283 (16%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEI--------NKSFLAEVKTIGSI-H 291
N K LG+G FG V E K A R + + +++ ++E+K + I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 292 HQNLVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML------DWQQRKKII-- 342
H N+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 343 -LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 402 GTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------- 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 266
Query: 437 KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNG 479
+ D + PE L + ++ S+LV+ N +Q+N
Sbjct: 267 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 31/261 (11%)
Query: 264 KVAVKR--LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGS-L 320
KVA+KR LE L E++ + HH N+V K LV + + GS L
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 321 D--RWLFQRSDE--FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNF 376
D + + + + +LD I+ ++ +GL YLH++ + +H D+K NILL +
Sbjct: 97 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 153
Query: 377 NAKVADFGLSKLI----DQDQSQVVTTMRGTPGYLAPEWLSSI--ITEKVDIYSFGVVML 430
+ ++ADFG+S + D +++V T GTP ++APE + + K DI+SFG+ +
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 213
Query: 431 EILCGRKVFDRSQPEEEDMYLLSIFKKKAE---EDKLSDLVDKHSNDMQSNGEEVVNMMK 487
E+ G + + P + M L E +DK +++ K+ + K
Sbjct: 214 ELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK--EMLKKYGKSFR----------K 261
Query: 488 VAAWCLESDFAKRPSMSMVVR 508
+ + CL+ D KRP+ + ++R
Sbjct: 262 MISLCLQKDPEKRPTAAELLR 282
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVK--RLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFC 302
LG+G + +V++G ++ VA+K RLE + + EV + + H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEF--MLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+ LV+EY LD+ L Q D+ +++ K + + +GL Y H RQK+
Sbjct: 70 HTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAPEWLSSII 416
LH D+KPQN+L++ K+ADFGL++ ++VVT P L S+
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG---STDY 178
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEE 461
+ ++D++ G + E+ GR +F S EE+ ++ I EE
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEE 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 112/215 (52%), Gaps = 26/215 (12%)
Query: 238 MTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHH 292
+ + ++K+ +G+G +G V++ + G VA+KR+ E I + + E+ + +HH
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQ--QRKKIILDIAKGLT 350
N+V LI + LV+E+M ++ L + DE Q Q K + + +G+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGY 406
+ H+ +ILH D+KPQN+L++ + K+ADFGL++ + +VVT Y
Sbjct: 134 HCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----Y 185
Query: 407 LAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
AP+ L S + VDI+S G + E++ G+ +F
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 31/261 (11%)
Query: 264 KVAVKR--LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGS-L 320
KVA+KR LE L E++ + HH N+V K LV + + GS L
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 321 D--RWLFQRSDE--FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNF 376
D + + + + +LD I+ ++ +GL YLH++ + +H D+K NILL +
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 158
Query: 377 NAKVADFGLSKLI----DQDQSQVVTTMRGTPGYLAPEWLSSI--ITEKVDIYSFGVVML 430
+ ++ADFG+S + D +++V T GTP ++APE + + K DI+SFG+ +
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 431 EILCGRKVFDRSQPEEEDMYLLSIFKKKAE---EDKLSDLVDKHSNDMQSNGEEVVNMMK 487
E+ G + + P + M L E +DK +++ K+ + K
Sbjct: 219 ELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK--EMLKKYGKSFR----------K 266
Query: 488 VAAWCLESDFAKRPSMSMVVR 508
+ + CL+ D KRP+ + ++R
Sbjct: 267 MISLCLQKDPEKRPTAAELLR 287
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 242 FRKMLGKGGFGSV-FEGTQTDGTKVAVKRL--EGIGEINKSFLAEVKTIGSIHHQNLVRL 298
F++ LG G F V + G AVK + + + S E+ + I H+N+V L
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
+H LV + + G L + ++ F + + +I + + YLH R
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKG--FYTE-KDASTLIRQVLDAVYYLH---RM 139
Query: 359 KILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP+N+L D ++DFGLSK+ + + V++T GTPGY+APE L+
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQK 197
Query: 416 -ITEKVDIYSFGVVMLEILCGRKVF 439
++ VD +S GV+ +LCG F
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 244 KMLGKGGFGSVF----EGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
K LG G +G V + T + +++ N L EV + + H N+++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
F +K + LV E G L + R +D II + G+TYLH +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVD---AAVIIKQVLSGVTYLH---KHN 156
Query: 360 ILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII 416
I+H D+KP+N+LL+ K+ DFGLS + ++Q ++ + GT Y+APE L
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPEVLRKKY 214
Query: 417 TEKVDIYSFGVVMLEILCGRKVF 439
EK D++S GV++ +L G F
Sbjct: 215 DEKCDVWSIGVILFILLAGYPPF 237
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLLPVR 197
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 197
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 197
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 194
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 16/229 (6%)
Query: 235 LKVMTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGS 289
+++ D+F K+ LG G G VF+ + V ++L E I + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ +V G + E+M GSLD+ L + + Q K+ + + KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLA 408
TYL E + KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 171
Query: 409 PEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFK 456
PE L + + DI+S G+ ++E+ GR +E+ ++IF+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE 220
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 49/284 (17%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEI--------NKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E K A R + + +++ ++E+K + I HH N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 295 LVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFM-----------LDWQQRKKII 342
+V L+G C + L+V E+ G+L +L + +EF+ L +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRG 402
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 403 TP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR-------K 437
P ++APE + + T + D++SFGV++ EI C R +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 438 VFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 16/217 (7%)
Query: 223 VPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL 281
V G+ + E++ + LG G +G V+EG + VAVK L+ + FL
Sbjct: 202 VYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 261
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E + I H NLV+L+G C + ++ E+M G+L +L + + Q+ +
Sbjct: 262 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVNAV 315
Query: 342 IL-----DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
+L I+ + YL ++ +H ++ +N L+ N KVADFGLS+L+ D
Sbjct: 316 VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 372
Query: 397 VTTMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEI 432
+ + APE L+ + + K D+++FGV++ EI
Sbjct: 373 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 16/217 (7%)
Query: 223 VPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL 281
V G+ + E++ + LG G +G V+EG + VAVK L+ + FL
Sbjct: 244 VYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 303
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E + I H NLV+L+G C + ++ E+M G+L +L + + Q+ +
Sbjct: 304 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVNAV 357
Query: 342 IL-----DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
+L I+ + YL ++ +H ++ +N L+ N KVADFGLS+L+ D
Sbjct: 358 VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 414
Query: 397 VTTMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEI 432
+ + APE L+ + + K D+++FGV++ EI
Sbjct: 415 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 52/236 (22%)
Query: 232 FEELKVMTDNFRKMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLAEVKTIGSI 290
FEE+ V LG+G FG V + D A+K++ E + L+EV + S+
Sbjct: 8 FEEIAV--------LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL 59
Query: 291 HHQNLVRLIGFCAE-------------KSHNLLVYEYMPNGSL-----DRWLFQRSDEFM 332
+HQ +VR E KS + EY N +L L Q+ DE+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY- 118
Query: 333 LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD 392
W+ ++I+ + L+Y+H Q I+H ++KP NI +D + N K+ DFGL+K + +
Sbjct: 119 --WRLFRQIL----EALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 393 -------------QSQVVTTMRGTPGYLAPEWLSSI--ITEKVDIYSFGVVMLEIL 433
S +T+ GT Y+A E L EK+D YS G++ E +
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 41/308 (13%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTDGTK--VAVKRL-EGIG-EINK 278
P F LK + D LG+G FG V ++ T DGT VAVK L EG G ++
Sbjct: 3 PTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRS 56
Query: 279 SFLAEVKTIGSIHHQNLVRLIGFCAEKSHN--LLVYEYMPNGSLDRWLFQRS---DEFML 333
+ E++ + +++H+++V+ G C ++ LV EY+P GSL +L + + +L
Sbjct: 57 GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL 116
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQ 393
QQ I +G+ YLH Q +H + +N+LLD + K+ DFGL+K + +
Sbjct: 117 FAQQ-------ICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
Query: 394 SQVVTTMRG-TPGY-LAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQ-PEEEDM 449
G +P + APE L D++SFGV + E+L D +Q P +
Sbjct: 167 EYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL---TYCDSNQSPHTKFT 223
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSN--GEEVVNMMKVAAWCLESDFAKRPSMSMVV 507
L+ + + +L++L+++ + + E+ ++MK C E++ + RP+ +V
Sbjct: 224 ELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN---CWETEASFRPTFQNLV 280
Query: 508 RVLEGVTE 515
+L+ E
Sbjct: 281 PILQTAQE 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 41/308 (13%)
Query: 227 PKRFSFEELKVMTDNFRKMLGKGGFGSV----FEGTQTDGTK--VAVKRL-EGIG-EINK 278
P F LK + D LG+G FG V ++ T DGT VAVK L EG G ++
Sbjct: 2 PTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRS 55
Query: 279 SFLAEVKTIGSIHHQNLVRLIGFCAEKSHN--LLVYEYMPNGSLDRWLFQRS---DEFML 333
+ E++ + +++H+++V+ G C ++ LV EY+P GSL +L + + +L
Sbjct: 56 GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL 115
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQ 393
QQ I +G+ YLH Q +H + +N+LLD + K+ DFGL+K + +
Sbjct: 116 FAQQ-------ICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
Query: 394 SQVVTTMRG-TPGY-LAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQ-PEEEDM 449
G +P + APE L D++SFGV + E+L D +Q P +
Sbjct: 166 EYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL---TYCDSNQSPHTKFT 222
Query: 450 YLLSIFKKKAEEDKLSDLVDKHSNDMQSN--GEEVVNMMKVAAWCLESDFAKRPSMSMVV 507
L+ + + +L++L+++ + + E+ ++MK C E++ + RP+ +V
Sbjct: 223 ELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN---CWETEASFRPTFQNLV 279
Query: 508 RVLEGVTE 515
+L+ E
Sbjct: 280 PILQTAQE 287
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 225 GLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAE 283
G+ + E++ + LG G +G V+EG + VAVK L+ + FL E
Sbjct: 207 GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 266
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL 343
+ I H NLV+L+G C + ++ E+M G+L +L + + Q+ ++L
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVSAVVL 320
Query: 344 -----DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
I+ + YL ++ +H ++ +N L+ N KVADFGLS+L+ D
Sbjct: 321 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEI 432
+ + APE L+ + + K D+++FGV++ EI
Sbjct: 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEI--------NKSFLAEVKTIGSI-H 291
N K LG+G FG V E K A R + + +++ ++E+K + I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 292 HQNLVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFM---------LDWQQRKKI 341
H N+V L+G C + L+V E+ G+L +L + +EF+ L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 402 GTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
P ++APE + + T + D++SFGV++ EI
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 245 MLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQN 294
LGKGGF FE + D +V ++ + KS L E+ S+ HQ+
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKI-----VPKSLLLKPHQREKMSMEISIHRSLAHQH 102
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V GF + +V E SL +R L + + + I G YLH
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH- 158
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS 414
R +++H D+K N+ L+ + K+ DFGL+ ++ D + + GTP Y+APE LS
Sbjct: 159 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSK 215
Query: 415 I-ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ +VD++S G +M +L G+ F+ S
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 245 MLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQN 294
LGKGGF FE + D +V ++ + KS L E+ S+ HQ+
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKI-----VPKSLLLKPHQREKMSMEISIHRSLAHQH 76
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V GF + +V E SL +R L + + + I G YLH
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH- 132
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS 414
R +++H D+K N+ L+ + K+ DFGL+ ++ D + + GTP Y+APE LS
Sbjct: 133 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSK 189
Query: 415 I-ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ +VD++S G +M +L G+ F+ S
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 245 MLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQN 294
LGKGGF FE + D +V ++ + KS L E+ S+ HQ+
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKI-----VPKSLLLKPHQREKMSMEISIHRSLAHQH 100
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V GF + +V E SL +R L + + + I G YLH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH- 156
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS 414
R +++H D+K N+ L+ + K+ DFGL+ ++ D + + GTP Y+APE LS
Sbjct: 157 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSK 213
Query: 415 I-ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ +VD++S G +M +L G+ F+ S
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRL-EGIGEI-NKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L EG +++ ++E+K + I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 295 LVRLIGFCAEKSHNLLVY-EYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 18/186 (9%)
Query: 264 KVAVKRL--EGIGEINKSFLAEVKTIGSIH-HQNLVRLIGFCAEKSHNLLVYEYMPNGSL 320
+V +RL E + E+ ++ E + + H +++ LI S LV++ M G L
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 321 DRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKV 380
+L +++ L ++ + I+ + + +++LH + I+H D+KP+NILLD N ++
Sbjct: 188 FDYL---TEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241
Query: 381 ADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITE-------KVDIYSFGVVMLEIL 433
+DFG S ++ + + + GTPGYLAPE L + E +VD+++ GV++ +L
Sbjct: 242 SDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 434 CGRKVF 439
G F
Sbjct: 300 AGSPPF 305
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRLE--GIGEINKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L+ +++ ++E+K + I HH N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 295 LVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRLE--GIGEINKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L+ +++ ++E+K + I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 295 LVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 23/201 (11%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
K LG G FG V+ T TKVAVK ++ ++FLAE + ++ H LV+L
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII---LDIAKGLTYLHEDCR 357
K ++ E+M GSL +L +SDE Q K+I IA+G+ ++ +
Sbjct: 245 VVT-KEPIYIITEFMAKGSLLDFL--KSDEGSK--QPLPKLIDFSAQIAEGMAFIEQ--- 296
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
+ +H D++ NIL+ + K+ADFGL+++ + + APE ++
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSF 346
Query: 417 TEKVDIYSFGVVMLEILC-GR 436
T K D++SFG++++EI+ GR
Sbjct: 347 TIKSDVWSFGILLMEIVTYGR 367
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 246 LGKGGFGSVFE-GTQTDGTKVAVKRLE--GIGEINKSFL-AEVKTIGSIHHQNLVRLIGF 301
+G G +G + ++DG + K L+ + E K L +EV + + H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 302 CAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQ 358
++++ L V EY G L + + + E LD ++ +L + LT ++C +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD----EEFVLRVMTQLTLALKECHR 129
Query: 359 K------ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+ +LH D+KP N+ LDG N K+ DFGL+++++ D S GTP Y++PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSPEQM 188
Query: 413 SSI-ITEKVDIYSFGVVMLEILCG 435
+ + EK DI+S G ++ E LC
Sbjct: 189 NRMSYNEKSDIWSLGCLLYE-LCA 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 244 KMLGKGGFGSVFEGT-----QTDGTKVAVKRLEGIGEINKSFLA---EVKTIGSIHHQNL 295
K+LG G FG+V +G ++ V +K +E +SF A + IGS+ H ++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHI 95
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR----SDEFMLDWQQRKKIILDIAKGLTY 351
VRL+G C S L V +Y+P GSL + Q + +L+W + IAKG+ Y
Sbjct: 96 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWG------VQIAKGMYY 148
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP-GYLAPE 410
L E ++H ++ +N+LL +VADFG++ L+ D Q++ + TP ++A E
Sbjct: 149 LEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 411 WLS-SIITEKVDIYSFGVVMLEILC 434
+ T + D++S+GV + E++
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 197
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 196
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 32/221 (14%)
Query: 235 LKVMTDNFR-------KMLGKGGFGSVFEGT-----QTDGTKVAVKRLEGIGEINKSFLA 282
+KV+ F+ K+LG G FG+V +G ++ V +K +E +SF A
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQA 61
Query: 283 ---EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR----SDEFMLDW 335
+ IGS+ H ++VRL+G C S L V +Y+P GSL + Q + +L+W
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW 120
Query: 336 QQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQ 395
+ IAKG+ YL E ++H ++ +N+LL +VADFG++ L+ D Q
Sbjct: 121 G------VQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 396 VVTTMRGTP-GYLAPEWLS-SIITEKVDIYSFGVVMLEILC 434
++ + TP ++A E + T + D++S+GV + E++
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Query: 240 DNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQN 294
D+F K+ LG G G VF+ + V ++L E I + E++ + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V G + E+M GSLD+ L + + Q K+ + + KGLTYL E
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE 184
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++PE L
Sbjct: 185 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 238
Query: 414 SI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
+ + DI+S G+ ++E+ GR + P+ +++ L+
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGR--YPIPPPDAKELELM 276
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 126/302 (41%), Gaps = 53/302 (17%)
Query: 246 LGKGGFGSVFEGTQT------DGTKVAVKRL--EGIGEINKSFLAEVKTIGSIHHQNLVR 297
+G+G FG VF+ T VAVK L E ++ F E + + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFML-----DWQQRKK------------ 340
L+G CA L++EYM G L+ +L S + D R +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 341 ----IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV 396
I +A G+ YL E +K +H D+ +N L+ N K+ADFGLS+ I
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 397 VTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
P ++ PE + + T + D++++GVV+ EI Y L
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS---------------YGLQP 276
Query: 455 FKKKAEEDKLSDLVDKHSNDMQSNGE-EVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGV 513
+ A E+ + + D + N E+ N+M++ C A RPS + R+L+ +
Sbjct: 277 YYGMAHEEVIYYVRDGNILACPENCPLELYNLMRL---CWSKLPADRPSFCSIHRILQRM 333
Query: 514 TE 515
E
Sbjct: 334 CE 335
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 16/177 (9%)
Query: 271 EGIGEINKSFLAEVKTIGSIH-HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD 329
E + E+ ++ L EV + + H N+++L + LV++ M G L +L ++
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TE 117
Query: 330 EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLI 389
+ L ++ +KI+ + + + LH + I+H D+KP+NILLD + N K+ DFG S +
Sbjct: 118 KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 390 DQDQSQVVTTMRGTPGYLAPEWLSSIITE-------KVDIYSFGVVMLEILCGRKVF 439
D + + ++ GTP YLAPE + + + +VD++S GV+M +L G F
Sbjct: 175 DPGEK--LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAVK ++ ++N + L EV+ + ++H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKT-QLNPTSLQKLFREVRIMKILNHP 74
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L M + + R K I + Y H
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKF-RQIVSAVQYCH 131
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ + I+H D+K +N+LLDG+ N K+ADFG S + + T G+P Y APE
Sbjct: 132 Q---KYIVHRDLKAENLLLDGDMNIKIADFGFSN--EFTVGNKLDTFCGSPPYAAPELFQ 186
Query: 414 SIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 240 DNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQN 294
D+F K+ LG G G VF+ + V ++L E I + E++ + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V G + E+M GSLD+ L + + Q K+ + + KGLTYL E
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLRE 125
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ KI+H D+KP NIL++ K+ DFG+S +LID+ ++ V GT Y++PE L
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV----GTRSYMSPERLQ 179
Query: 414 SI-ITEKVDIYSFGVVMLEILCGR 436
+ + DI+S G+ ++E+ GR
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 138 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 190
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRL-EGIGEI-NKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L EG +++ ++E+K + I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 295 LVRLIGFCAEKSHNLLVY-EYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRLE--GIGEINKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L+ +++ ++E+K + I HH N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 295 LVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 199
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 235 LKVMTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGS 289
+++ D+F K+ LG G G VF+ + V ++L E I + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ +V G + E+M GSLD+ L + + Q K+ + + KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLA 408
TYL E + KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 171
Query: 409 PEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
PE L + + DI+S G+ ++E+ GR + P+ +++ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIPPPDAKELELM 214
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 242 FRKMLGKGGFGSVFEG------TQTDGTKVAVKRL-EGIGEINKSFLAEVKTIGSIHHQN 294
++ LG+G FG VF D VAVK L + K F E + + ++ H++
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFML--DWQQRKK-----------I 341
+V+ G C + ++V+EYM +G L+++L + M+ D Q R+ I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK-LIDQDQSQVVTTM 400
IA G+ YL Q +H D+ +N L+ N K+ DFG+S+ + D +V
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 401 RGTPGYLAPE-WLSSIITEKVDIYSFGVVMLEIL 433
++ PE + T + D++SFGV++ EI
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 34/223 (15%)
Query: 242 FRKMLGKGGFGSVFEGT-----QTDGT-KVAVKRLEGIGEINK--SFLAEVKTIGSI-HH 292
F K LG G FG V E T + D KVAVK L+ ++ + ++E+K + + H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM------------LDWQQRKK 340
+N+V L+G C L++ EY G L +L ++++ + LD + +
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 341 IIL--------DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD 392
+ L +A+G+ +L + +H D+ +N+LL AK+ DFGL++ I D
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 393 QSQVVTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
+ +V P ++APE + + T + D++S+G+++ EI
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRLE--GIGEINKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L+ +++ ++E+K + I HH N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 295 LVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 271
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 272 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 317
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 235 LKVMTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGS 289
+++ D+F K+ LG G G VF+ + V ++L E I + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ +V G + E+M GSLD+ L + + Q K+ + + KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLA 408
TYL E + KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 171
Query: 409 PEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
PE L + + DI+S G+ ++E+ GR + P+ +++ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIPPPDAKELELM 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 242 FRKMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGE-INKSFLAEVKTIGSIHHQN 294
++ LG+G FG VF + D VAVK L+ + K F E + + ++ H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM----------LDWQQRKKIILD 344
+V+ G C E ++V+EYM +G L+++L + + L Q I
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK-LIDQDQSQVVTTMRGT 403
IA G+ YL Q +H D+ +N L+ N K+ DFG+S+ + D +V
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 404 PGYLAPE-WLSSIITEKVDIYSFGVVMLEIL 433
++ PE + T + D++S GVV+ EI
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRLE--GIGEINKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L+ +++ ++E+K + I HH N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 295 LVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 137/312 (43%), Gaps = 46/312 (14%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 267
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 268 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 313
Query: 518 HNLHYNLVHLPI 529
N Y + +P+
Sbjct: 314 SNQEYLDLSMPL 325
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRLE--GIGEINKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L+ +++ ++E+K + I HH N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 295 LVRLIGFCAEKSHNLLVY-EYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 46/305 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L + T + D++SFGV+M EI P EE L + K+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKE 274
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK ++ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 275 GHRMDKPANCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRILTLT 320
Query: 518 HNLHY 522
N Y
Sbjct: 321 TNEEY 325
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKVAVK------RLEGIGEINKSFLAEVKTIGSIHHQNLV 296
K+LG G FG+V++G DG V + R + NK L E + + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
RL+G C + L V + MP G L + R + L Q + IAKG++YL ED
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHV--RENRGRLGSQDLLNWCMQIAKGMSYL-EDV 138
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEW--LSS 414
R ++H D+ +N+L+ + K+ DFGL++L+D D+ T G + +W L S
Sbjct: 139 R--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGGKVPIKWMALES 192
Query: 415 II----TEKVDIYSFGVVMLEILC-GRKVFD 440
I+ T + D++S+GV + E++ G K +D
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 46/305 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L + T + D++SFGV+M EI P EE L + K+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKE 274
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK ++ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 275 GHRMDKPANCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRILTLT 320
Query: 518 HNLHY 522
N Y
Sbjct: 321 TNEEY 325
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + E ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 41/250 (16%)
Query: 244 KMLGKGGFGSVFEGT-QTDGTKVAVKRL----EGIGEINKSFLAEVKTIGSIH-HQNLVR 297
K LGKG +G V++ + G VAVK++ + + ++F E+ + + H+N+V
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVN 73
Query: 298 LIGFC-AEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
L+ A+ ++ LV++YM D R++ +L+ ++ ++ + K + YLH
Sbjct: 74 LLNVLRADNDRDVYLVFDYM---ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKL---------------------IDQDQS 394
+LH D+KP NILL+ + KVADFGLS+ D DQ
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 395 QVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
++T T Y APE L S+ T+ +D++S G ++ EILCG+ +F S + ++
Sbjct: 186 -ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244
Query: 453 SIFKKKAEED 462
+ + ED
Sbjct: 245 GVIDFPSNED 254
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 235 LKVMTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGS 289
+++ D+F K+ LG G G VF+ + V ++L E I + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ +V G + E+M GSLD+ L + + Q K+ + + KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLA 408
TYL E + KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 171
Query: 409 PEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
PE L + + DI+S G+ ++E+ GR + P+ +++ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIPPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 235 LKVMTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGS 289
+++ D+F K+ LG G G VF+ + V ++L E I + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ +V G + E+M GSLD+ L + + Q K+ + + KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLA 408
TYL E + KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 171
Query: 409 PEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
PE L + + DI+S G+ ++E+ GR + P+ +++ L+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIPPPDAKELELM 214
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 51/286 (17%)
Query: 244 KMLGKGGFGSVFE----GTQTDGT--KVAVKRL-EGIGEI-NKSFLAEVKTIGSI-HHQN 294
K LG+G FG V E G T VAVK L EG +++ ++E+K + I HH N
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 295 LVRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFML----------DWQQRKKII- 342
+V L+G C + L+V E+ G+L +L + +EF+ D+ + +I
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 343 --LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+AKG+ +L +K +H D+ +NILL K+ DFGL++ I +D V
Sbjct: 190 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 401 RGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEI----------------LCGR------ 436
P ++APE + + T + D++SFGV++ EI C R
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 306
Query: 437 -KVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNGEE 481
+ D + PE L + ++ S+LV+ N +Q+N ++
Sbjct: 307 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 246 LGKGGFGSVFE-GTQTDGTKVAVKRLE--GIGEINKSFL-AEVKTIGSIHHQNLVRLIGF 301
+G G +G + ++DG + K L+ + E K L +EV + + H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 302 CAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQ 358
++++ L V EY G L + + + E LD ++ +L + LT ++C +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD----EEFVLRVMTQLTLALKECHR 129
Query: 359 K------ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+ +LH D+KP N+ LDG N K+ DFGL+++++ D+ GTP Y++PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSPEQM 188
Query: 413 SSI-ITEKVDIYSFGVVMLEILCG 435
+ + EK DI+S G ++ E LC
Sbjct: 189 NRMSYNEKSDIWSLGCLLYE-LCA 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 16/177 (9%)
Query: 271 EGIGEINKSFLAEVKTIGSIH-HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD 329
E + E+ ++ L EV + + H N+++L + LV++ M G L +L ++
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TE 117
Query: 330 EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLI 389
+ L ++ +KI+ + + + LH + I+H D+KP+NILLD + N K+ DFG S +
Sbjct: 118 KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 390 DQDQSQVVTTMRGTPGYLAPEWLSSIITE-------KVDIYSFGVVMLEILCGRKVF 439
D + + + GTP YLAPE + + + +VD++S GV+M +L G F
Sbjct: 175 DPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 242 FRKMLGKGGFGSVFEGT-----QTDGT-KVAVKRLEGIGEINK--SFLAEVKTIGSI-HH 292
F K LG G FG V E T + D KVAVK L+ ++ + ++E+K + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF-----------MLDWQQRKKI 341
+N+V L+G C L++ EY G L +L ++S L +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+A+G+ +L + +H D+ +N+LL AK+ DFGL++ I D + +V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 402 GTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
P ++APE + + T + D++S+G+++ EI
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 16/177 (9%)
Query: 271 EGIGEINKSFLAEVKTIGSIH-HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD 329
E + E+ ++ L EV + + H N+++L + LV++ M G L +L ++
Sbjct: 48 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TE 104
Query: 330 EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLI 389
+ L ++ +KI+ + + + LH + I+H D+KP+NILLD + N K+ DFG S +
Sbjct: 105 KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 161
Query: 390 DQDQSQVVTTMRGTPGYLAPEWLSSIITE-------KVDIYSFGVVMLEILCGRKVF 439
D + + + GTP YLAPE + + + +VD++S GV+M +L G F
Sbjct: 162 DPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 198
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Query: 240 DNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQN 294
D+F K+ LG G G VF+ + V ++L E I + E++ + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V G + E+M GSLD+ L + + Q K+ + + KGLTYL E
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE 149
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++PE L
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 203
Query: 414 SI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
+ + DI+S G+ ++E+ GR + P+ +++ L+
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGR--YPIPPPDAKELELM 241
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAVK ++ ++N S L EV+ + ++H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNHP 66
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L +M + + R K I + Y
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--WMKEKEARAKF-RQIVSAVQY-- 121
Query: 354 EDCRQK-ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
C QK I+H D+K +N+LLD + N K+ADFG S + + T G+P Y APE
Sbjct: 122 --CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELF 177
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQT------DGTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 205
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 33/222 (14%)
Query: 240 DNFR--KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
DN + +++G+G +G+V++G+ D VAVK N + + + H N+ R
Sbjct: 13 DNLKLLELIGRGRYGAVYKGS-LDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 298 LI----GFCAE-KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
I A+ + LLV EY PNGSL ++L + DW ++ + +GL YL
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYL 127
Query: 353 HEDC------RQKILHLDIKPQNILLDGNFNAKVADFGLS------KLIDQ-DQSQVVTT 399
H + + I H D+ +N+L+ + ++DFGLS +L+ ++ +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 400 MRGTPGYLAPEWLSSIIT--------EKVDIYSFGVVMLEIL 433
GT Y+APE L + ++VD+Y+ G++ EI
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 198
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 116/231 (50%), Gaps = 21/231 (9%)
Query: 246 LGKGGFGSVFEGT--QTDGTKVAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVR 297
+G+G +G VF+ + G VA+KR+ EG+ +A ++ + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 298 LIGFCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
L C ++ LV+E++ + L +L + E + + K ++ + +GL +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-W 411
H +++H D+KPQNIL+ + K+ADFGL+++ + +T++ T Y APE
Sbjct: 137 HS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVL 191
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
L S VD++S G + E+ + +F S ++ +L + EED
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H ++ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 145 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 197
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 227
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 242 FRKMLGKGGFGSVFEGT-----QTDGT-KVAVKRLEGIGEINK--SFLAEVKTIGSI-HH 292
F K LG G FG V E T + D KVAVK L+ ++ + ++E+K + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIIL-- 343
+N+V L+G C L++ EY G L +L ++S D + +L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 344 --DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+A+G+ +L + +H D+ +N+LL AK+ DFGL++ I D + +V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 402 GTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
P ++APE + + T + D++S+G+++ EI
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 144 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 196
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 199
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 140 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 192
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAVK ++ ++N S L EV+ + ++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNHP 73
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L M + + R K I + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKF-RQIVSAVQY-- 128
Query: 354 EDCRQK-ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
C QK I+H D+K +N+LLD + N K+ADFG S + + T G+P Y APE
Sbjct: 129 --CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELF 184
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAVK ++ ++N S L EV+ + ++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNHP 73
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L M + + R K I + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKF-RQIVSAVQY-- 128
Query: 354 EDCRQK-ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
C QK I+H D+K +N+LLD + N K+ADFG S + + T G+P Y APE
Sbjct: 129 --CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELF 184
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG D T+VAVK + + + FL E + ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLD-------WQQRKKIILDIAKGLT 350
L+G ++ L+V E M +G L +L E + Q+ ++ +IA G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ +K +H ++ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 146 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 198
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W++ + T D++SFGVV+ EI
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + + H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 149
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 116/231 (50%), Gaps = 21/231 (9%)
Query: 246 LGKGGFGSVFEGT--QTDGTKVAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVR 297
+G+G +G VF+ + G VA+KR+ EG+ +A ++ + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 298 LIGFCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
L C ++ LV+E++ + L +L + E + + K ++ + +GL +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-W 411
H +++H D+KPQNIL+ + K+ADFGL+++ + +T++ T Y APE
Sbjct: 137 HS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVL 191
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
L S VD++S G + E+ + +F S ++ +L + EED
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 41/285 (14%)
Query: 246 LGKGGFGSVFEGT--QTDGTKVAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVR 297
+G+G +G VF+ + G VA+KR+ EG+ +A ++ + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 298 LIGFCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
L C ++ LV+E++ + L +L + E + + K ++ + +GL +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-W 411
H +++H D+KPQNIL+ + K+ADFGL+++ + +T++ T Y APE
Sbjct: 137 HS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVL 191
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVFDRSQ--------------PEEEDMYLLSIFKK 457
L S VD++S G + E+ + +F S P EED +
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPS 502
+A K + ++K D+ G+++ ++K CL + AKR S
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDL--LLK----CLTFNPAKRIS 290
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + + H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 149
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 242 FRKMLGKGGFGSVFEGT-----QTDGT-KVAVKRLEGIGEINK--SFLAEVKTIGSI-HH 292
F K LG G FG V E T + D KVAVK L+ ++ + ++E+K + + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N+V L+G C L++ EY G L +L ++ + E L +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTT 399
+A+G+ +L + +H D+ +N+LL AK+ DFGL++ I D + +V
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 400 MRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
P ++APE + + T + D++S+G+++ EI
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 244 KMLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEIN----KSFLAEVKTIGSIHHQNLVRL 298
++LG+GGFG VF + G A K+L + + E K + +H + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--DIAKGLTYLHEDC 356
+ E +L + + NG R+ DE +Q+ + I I GL +LH+
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ-- 307
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSI 415
+ I++ D+KP+N+LLD + N +++D GL+ + Q++ GTPG++APE L
Sbjct: 308 -RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD ++ GV + E++ R F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 246 LGKGGFGSVFEG------TQTDGTKVAVKRLEGIGE-INKSFLAEVKTIGSIHHQNLVRL 298
LG+G FG VF + D VAVK L+ E + F E + + + HQ++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM------------LDWQQRKKIILDIA 346
G C E L+V+EYM +G L+R+L + L Q + +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK-LIDQDQSQVVTTMRGTPG 405
G+ YL +H D+ +N L+ K+ DFG+S+ + D +V
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 406 YLAPE-WLSSIITEKVDIYSFGVVMLEIL 433
++ PE L T + D++SFGVV+ EI
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIF 231
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 229 RFSFEELKVMTDNFRKMLGKGGFGSV-FEGTQTDGTKVAVK--------RLEGIGEINKS 279
++S ++ +++ + LG G FG V ++ +G A+K RL+ + N
Sbjct: 2 KYSLQDFQIL-----RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE 56
Query: 280 FLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRK 339
L + + H ++R+ G + ++ +Y+ G L L ++S F K
Sbjct: 57 RLM----LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRF--PNPVAK 109
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTT 399
++ L YLH + I++ D+KP+NILLD N + K+ DFG +K + V
Sbjct: 110 FYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYX 162
Query: 400 MRGTPGYLAPEWLSSIITEK-VDIYSFGVVMLEILCGRKVF 439
+ GTP Y+APE +S+ K +D +SFG+++ E+L G F
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 244 KMLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEIN----KSFLAEVKTIGSIHHQNLVRL 298
++LG+GGFG VF + G A K+L + + E K + +H + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--DIAKGLTYLHEDC 356
+ E +L + + NG R+ DE +Q+ + I I GL +LH+
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ-- 307
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSI 415
+ I++ D+KP+N+LLD + N +++D GL+ + Q++ GTPG++APE L
Sbjct: 308 -RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD ++ GV + E++ R F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 244 KMLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEIN----KSFLAEVKTIGSIHHQNLVRL 298
++LG+GGFG VF + G A K+L + + E K + +H + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--DIAKGLTYLHEDC 356
+ E +L + + NG R+ DE +Q+ + I I GL +LH+
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ-- 307
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSI 415
+ I++ D+KP+N+LLD + N +++D GL+ + Q++ GTPG++APE L
Sbjct: 308 -RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD ++ GV + E++ R F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 246 LGKGGFGSVFEG------TQTDGTKVAVKRLEGIGE-INKSFLAEVKTIGSIHHQNLVRL 298
LG+G FG VF + D VAVK L+ E + F E + + + HQ++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM------------LDWQQRKKIILDIA 346
G C E L+V+EYM +G L+R+L + L Q + +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK-LIDQDQSQVVTTMRGTPG 405
G+ YL +H D+ +N L+ K+ DFG+S+ + D +V
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 406 YLAPE-WLSSIITEKVDIYSFGVVMLEIL 433
++ PE L T + D++SFGVV+ EI
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIF 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 244 KMLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEIN----KSFLAEVKTIGSIHHQNLVRL 298
++LG+GGFG VF + G A K+L + + E K + +H + +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--DIAKGLTYLHEDC 356
+ E +L + + NG R+ DE +Q+ + I I GL +LH+
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ-- 307
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSI 415
+ I++ D+KP+N+LLD + N +++D GL+ + Q++ GTPG++APE L
Sbjct: 308 -RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD ++ GV + E++ R F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 28/241 (11%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKM--LGKGGFGSVFEGTQTDGTKVAVKR---LEGIGEI 276
QVPG+ + E + F K+ +GKG FG VF+G +V + LE +
Sbjct: 10 QVPGMQNNIADPE-----ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDE 64
Query: 277 NKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGS-LDRWLFQRSDEFMLDW 335
+ E+ + + + G + S ++ EY+ GS LD DEF
Sbjct: 65 IEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF---- 120
Query: 336 QQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQ 395
Q ++ +I KGL YLH +K +H DIK N+LL + K+ADFG++ + Q +
Sbjct: 121 -QIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 176
Query: 396 VVTTMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
T GTP ++APE + S K DI+S G+ +E+ G +P DM+ + +
Sbjct: 177 -RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG-------EPPNSDMHPMRV 228
Query: 455 F 455
Sbjct: 229 L 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 243 RKMLGKGGFGSVFEGTQ-TDGTKVAVKRL-EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
R +LGKG +G V+ G ++ ++A+K + E ++ E+ + H+N+V+ +G
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+E + E +P GSL L + + Q I +GL YLH++ +I
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 143
Query: 361 LHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS---II 416
+H DIK N+L++ K++DFG SK + + T GT Y+APE +
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAE 460
+ DI+S G ++E+ G+ F + M+ + +FK E
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 246
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 240 DNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQN 294
D+F K+ LG G G VF+ + V ++L E I + E++ + +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+V G + E+M GSLD+ L + + Q K+ + + KGLTYL E
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLRE 141
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ KI+H D+KP NIL++ K+ DFG+S +LID + + GT Y++PE L
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 195
Query: 414 SI-ITEKVDIYSFGVVMLEILCGR 436
+ + DI+S G+ ++E+ GR
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 10/224 (4%)
Query: 243 RKMLGKGGFGSVFEGTQ-TDGTKVAVKRL-EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
R +LGKG +G V+ G ++ ++A+K + E ++ E+ + H+N+V+ +G
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+E + E +P GSL L + + Q I +GL YLH++ +I
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 129
Query: 361 LHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS---II 416
+H DIK N+L++ K++DFG SK + + T GT Y+APE +
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAE 460
+ DI+S G ++E+ G+ F + M+ + +FK E
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 238 MTDNFRKM--LGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEINKS----FLAEVKTIGSI 290
++D ++++ LG G +G V + G + A+K ++ S L EV + +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
H N+++L F +K + LV E G L + R +D I+ + G T
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTT 135
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTTMR---GTP 404
YLH + I+H D+KP+N+LL+ K+ DFGLS +V M+ GT
Sbjct: 136 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGKMKERLGTA 187
Query: 405 GYLAPEWLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
Y+APE L EK D++S GV++ +LCG F +E
Sbjct: 188 YYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQT------DGTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQ----RSDEFMLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L ++ +L K+I +IA G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 205
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAV+ ++ ++N S L EV+ + ++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFREVRIMKVLNHP 73
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L M + + R K I + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKF-RQIVSAVQY-- 128
Query: 354 EDCRQK-ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
C QK I+H D+K +N+LLD + N K+ADFG S + + T G+P Y APE
Sbjct: 129 --CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELF 184
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 129/282 (45%), Gaps = 36/282 (12%)
Query: 241 NFR--KMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
NFR K +G+G F V+ DG VA+K+++ ++ A E+ + ++H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL--FQRSDEFMLD---WQQRKKIILDIAKG 348
N+++ E + +V E G L R + F++ + + W K + +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW----KYFVQLCSA 148
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
L ++H ++++H DIKP N+ + K+ D GL + ++ ++ GTP Y++
Sbjct: 149 LEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMS 204
Query: 409 PEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDL 467
PE + + K DI+S G ++ E+ + F + M L S+ KK + D
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPF-----YGDKMNLYSLCKKIEQCDYPPLP 259
Query: 468 VDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRV 509
D +S +++ ++VNM C+ D KRP ++ V V
Sbjct: 260 SDHYSEELR----QLVNM------CINPDPEKRPDVTYVYDV 291
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 241 NFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQNL 295
++ K+LGKG FG V + G A+K L I K +A E + + + H L
Sbjct: 11 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 296 VRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
L A ++H+ L V EY G L F S E + ++ + +I L YLH
Sbjct: 71 TALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ +++ DIK +N++LD + + K+ DFGL K D + + T GTP YLAPE L
Sbjct: 126 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLE 181
Query: 414 -SIITEKVDIYSFGVVMLEILCGRKVF 439
+ VD + GVVM E++CGR F
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 246 LGKGGFGSVFEG------TQTDGTKVAVKRLEGIGE-INKSFLAEVKTIGSIHHQNLVRL 298
LG+G FG VF + D VAVK L+ E + F E + + + HQ++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM------------LDWQQRKKIILDIA 346
G C E L+V+EYM +G L+R+L + L Q + +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK-LIDQDQSQVVTTMRGTPG 405
G+ YL +H D+ +N L+ K+ DFG+S+ + D +V
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 406 YLAPE-WLSSIITEKVDIYSFGVVMLEIL 433
++ PE L T + D++SFGVV+ EI
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 238 MTDNFR--KMLGKGGFGSVFE-GTQTDGTKVAVKRLEGIGEINKS----FLAEVKTIGSI 290
++D ++ K LG G +G V + G + A+K ++ S L EV + +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
H N+++L F +K + LV E G L + R +D I+ + G T
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AAVIMKQVLSGTT 118
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTTMR---GTP 404
YLH + I+H D+KP+N+LL+ K+ DFGLS +V M+ GT
Sbjct: 119 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGKMKERLGTA 170
Query: 405 GYLAPEWLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
Y+APE L EK D++S GV++ +LCG F +E
Sbjct: 171 YYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 212
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 147
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 241 NFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQNL 295
++ K+LGKG FG V + G A+K L I K +A E + + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 296 VRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
L A ++H+ L V EY G L F S E + ++ + +I L YLH
Sbjct: 68 TALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ +++ DIK +N++LD + + K+ DFGL K D + + T GTP YLAPE L
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLE 178
Query: 414 -SIITEKVDIYSFGVVMLEILCGRKVF 439
+ VD + GVVM E++CGR F
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 149
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 167
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 241 NFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQNL 295
++ K+LGKG FG V + G A+K L I K +A E + + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 296 VRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
L A ++H+ L V EY G L F S E + ++ + +I L YLH
Sbjct: 68 TALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ +++ DIK +N++LD + + K+ DFGL K D + + T GTP YLAPE L
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLE 178
Query: 414 -SIITEKVDIYSFGVVMLEILCGRKVF 439
+ VD + GVVM E++CGR F
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 155
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 216 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 259
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 147
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 244 KMLGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ +G+G +G V T+VA+K++ + L E++ + H+N++ +
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+ + Y+ ++ L++ L + I +GL Y+H +
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS---ANV 165
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLID--QDQSQVVTTMRGTPGYLAPEWL--SSII 416
LH D+KP N+L++ + K+ DFGL+++ D D + +T T Y APE + S
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY 225
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQ 476
T+ +DI+S G ++ E+L R +F ++ ++L I ++ED + K N +Q
Sbjct: 226 TKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ 285
Query: 477 S 477
S
Sbjct: 286 S 286
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQ----RSDEFMLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L ++ +L K+I +IA G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N ++ +F K+ DFG+++ D + +G G L
Sbjct: 143 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 195
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 147
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD------GTKVAVKRLEGIGEINK--SFLAEVKTIGSIHHQNLVR 297
LG+G FG V+EG T+VA+K + + + FL E + + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEF----MLDWQQRKKIIL---DIAKGLT 350
L+G ++ L++ E M G L +L E +L K+I +IA G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YL+ + K +H D+ +N + +F K+ DFG+++ D + +G G L
Sbjct: 140 YLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 192
Query: 411 WLS------SIITEKVDIYSFGVVMLEI 432
W+S + T D++SFGVV+ EI
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 151
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 39 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR---DIACGC 154
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG++ QD + +G
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----QDIYRASYYRKGGCAM 207
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 147
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 34/223 (15%)
Query: 242 FRKMLGKGGFGSVFEGTQTDGTK------VAVKRLEGIGEINK--SFLAEVKTIGSI-HH 292
F K+LG G FG V T +K VAVK L+ + ++ + ++E+K + + H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM---LDWQQRKKI-------- 341
+N+V L+G C L++EY G L +L + ++F ++++ +K++
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 342 ---------ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD 392
+AKG+ +L + +H D+ +N+L+ K+ DFGL++ I D
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 393 QSQVVTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
+ VV P ++APE L I T K D++S+G+++ EI
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 151
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 145
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 249
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKV-AVKRL--EGIGEIN--KSFLAEVKTIGSIHHQNLVRL 298
+ +GKG FG V + D K+ A+K + + E N ++ E++ + + H LV L
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
++ +V + + G L R+ Q++ F + K I ++ L YL Q
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDL-RYHLQQNVHF--KEETVKLFICELVMALDYLQ---NQ 134
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI--- 415
+I+H D+KP NILLD + + + DF ++ ++ ++ +TTM GT Y+APE SS
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGA 192
Query: 416 -ITEKVDIYSFGVVMLEILCGRKVF 439
+ VD +S GV E+L GR+ +
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVK--RLEGIGE-INKSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V++ G A+K RLE E I + + E+ + + H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSD--EFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
K +LV+E+ LD+ L + D E L+ K +L + G+ Y H+ +++
Sbjct: 70 HTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRV 121
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAPEWL--SS 414
LH D+KPQN+L++ K+ADFGL++ + + +VVT Y AP+ L S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMGSK 176
Query: 415 IITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIF 455
+ +DI+S G + E++ G +F ++ M + I
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 152
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 153
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 214 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 257
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 144
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 205 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 248
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 151
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVK--RLEGIGE-INKSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V++ G A+K RLE E I + + E+ + + H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSD--EFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
K +LV+E+ LD+ L + D E L+ K +L + G+ Y H+ +++
Sbjct: 70 HTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRV 121
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAPEWL--SS 414
LH D+KPQN+L++ K+ADFGL++ + + +VVT Y AP+ L S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMGSK 176
Query: 415 IITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIF 455
+ +DI+S G + E++ G +F ++ M + I
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRIL 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N ++ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 147
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VA+K ++ ++N + L EV+ + ++H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFREVRIMKILNHP 71
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + L+ EY G + +L M + + R K I + Y H
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKF-RQIVSAVQYCH 128
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ ++I+H D+K +N+LLD + N K+ADFG S + + T G+P Y APE
Sbjct: 129 Q---KRIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDTFCGSPPYAAPELFQ 183
Query: 414 SIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ + L++ L + I +GL Y+H +LH
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 167
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 94/213 (44%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I ++HQN+V
Sbjct: 53 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 111
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR---DIACGC 168
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 221
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 267
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 268 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 313
Query: 518 HN 519
N
Sbjct: 314 SN 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 94/213 (44%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I ++HQN+V
Sbjct: 39 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 97
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGC 154
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 207
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 252
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 253 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 298
Query: 518 HN 519
N
Sbjct: 299 SN 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R E + ++
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVK--RLEGIGE-INKSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V++ G A+K RLE E I + + E+ + + H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSD--EFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
K +LV+E+ LD+ L + D E L+ K +L + G+ Y H+ +++
Sbjct: 70 HTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRV 121
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAPEWL--SS 414
LH D+KPQN+L++ K+ADFGL++ + + ++VT Y AP+ L S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLW-----YRAPDVLMGSK 176
Query: 415 IITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIF 455
+ +DI+S G + E++ G +F ++ M + I
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 71 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 123
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 242 FRKMLGKGGFGSVFEGTQT-DGTKVAVKRLE--GIGEINKSFLAEVKTIGSIHHQNLVRL 298
+ +G GGF V G VA+K ++ +G E++ + ++ HQ++ +L
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
+ +V EY P G L ++ + L ++ + + I + Y+H Q
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHS---Q 127
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS--SII 416
H D+KP+N+L D K+ DFGL ++ + T G+ Y APE + S +
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 417 TEKVDIYSFGVVMLEILCGRKVFD 440
+ D++S G+++ ++CG FD
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 242 FRKMLGKGGFGSV-------------FEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG 288
F++ LG G FG V + D ++V ++++E AE++ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE----------AEIEVLK 75
Query: 289 SIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKIILDIA 346
S+ H N++++ E HN+ +V E G L +R + ++ L +++ +
Sbjct: 76 SLDHPNIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 347 KGLTYLHEDCRQKILHLDIKPQNILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGT 403
L Y H Q ++H D+KP+NIL + K+ DFGL++L D+ T GT
Sbjct: 135 NALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGT 189
Query: 404 PGYLAPEWLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEE 446
Y+APE +T K DI+S GVVM +L G F + EE
Sbjct: 190 ALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 244 KMLGKGGFGSVFEGT------QTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNL 295
K LG+G FG V + T + T VAVK L+ + + L+E + ++H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWL---------------------FQRSDEFMLD 334
++L G C++ LL+ EY GSL +L DE L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 335 WQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS 394
I++G+ YL E K++H D+ +NIL+ K++DFGLS+ + ++ S
Sbjct: 149 MGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 395 QVVTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILC 434
V + P ++A E L I T + D++SFGV++ EI+
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G +G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 125
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 259
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 260 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 305
Query: 518 HN 519
N
Sbjct: 306 SN 307
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 256
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 257 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 302
Query: 518 HN 519
N
Sbjct: 303 SN 304
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 38 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR---DIACGC 153
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 206
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 244 KMLGKGGFGSVFEGT------QTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNL 295
K LG+G FG V + T + T VAVK L+ + + L+E + ++H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWL---------------------FQRSDEFMLD 334
++L G C++ LL+ EY GSL +L DE L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 335 WQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS 394
I++G+ YL E K++H D+ +NIL+ K++DFGLS+ + ++ S
Sbjct: 149 MGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 395 QVVTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILC 434
V + P ++A E L I T + D++SFGV++ EI+
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 38 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR---DIACGC 153
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 206
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---ANVLH 151
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA++++ + L E+K + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 151
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 145
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + +T T Y APE + S T+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I +ED
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQED 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 260
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 261 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 306
Query: 518 HN 519
N
Sbjct: 307 SN 308
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 65 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGC 180
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 181 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 233
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGIGEINKS--FLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + FL E I +HQN+V
Sbjct: 30 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 88
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR---DIACGC 145
Query: 350 TYLHEDCRQKILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 146 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 198
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 199 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 308
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 309 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 354
Query: 518 HN 519
N
Sbjct: 355 SN 356
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 55 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 113
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGC 170
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 171 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 223
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAVK ++ ++N S L EV+ + ++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNHP 73
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L M + + R K I + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKF-RQIVSAVQY-- 128
Query: 354 EDCRQK-ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
C QK I+H D+K +N+LLD + N K+ADFG S + + G P Y APE
Sbjct: 129 --CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPELF 184
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 267
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 268 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 313
Query: 518 HN 519
N
Sbjct: 314 SN 315
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 45 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 103
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGC 160
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 161 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 213
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 214 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 46/302 (15%)
Query: 244 KMLGKGGFGSVF--EGTQTDG------TKVAVKRLEGIGEIN--KSFLAEVKTIGSI-HH 292
K LG+G FG V E D TKVAVK L+ ++E++ + I H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-------------SDEFMLDWQQRK 339
+N++ L+G C + ++ EY G+L +L R + E L +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL +K +H D+ +N+L+ + K+ADFGL++ I D + T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKK 457
R ++APE L I T + D++SFGV++ EI P EE L + K+
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKE 267
Query: 458 KAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFE 517
DK S+ + E+ MM+ C + ++RP+ +V L+ +
Sbjct: 268 GHRMDKPSNCTN-----------ELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIVALT 313
Query: 518 HN 519
N
Sbjct: 314 SN 315
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 39 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGC 154
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 207
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 53 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR---DIACGC 168
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 221
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 238 MTDNF--RKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLA---EVKTIGSIH 291
+DN+ ++ LGKG F V +T G + A K + + F E + +
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY 351
H N+VRL E+S + LV++ + G L + R EF + I I + + Y
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSE-ADASHCIQQILESIAY 119
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
H + I+H ++KP+N+LL K+ADFGL+ I+ + S+ GTPGYL+
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 174
Query: 409 PEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
PE L ++ VDI++ GV++ +L G F
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 238 MTDNF--RKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLA---EVKTIGSIH 291
+DN+ ++ LGKG F V +T G + A K + + F E + +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY 351
H N+VRL E+S + LV++ + G L + R EF + I I + + Y
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSE-ADASHCIQQILESIAY 120
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
H + I+H ++KP+N+LL K+ADFGL+ I+ + S+ GTPGYL+
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 409 PEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
PE L ++ VDI++ GV++ +L G F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 79 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGC 194
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 195 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAM 247
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGI--GEINKSFLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + + FL E I +HQN+V
Sbjct: 53 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR---DIACGC 168
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAM 221
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ Y G+L +L R E + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 28/281 (9%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAV-KRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
+G G FG+V++G V + K ++ E ++F EV + H N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT- 102
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLD 364
K + +V ++ SL + L + +F + Q I A+G+ YLH + I+H D
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHA---KNIIHRD 157
Query: 365 IKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIITEK 419
+K NI L K+ DFGL+ + + SQ V G+ ++APE + ++ + +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217
Query: 420 VDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSNDMQSNG 479
D+YS+G+V+ E++ G + S D + + + A D LS L M+
Sbjct: 218 SDVYSYGIVLYELMTGELPY--SHINNRDQIIFMVGRGYASPD-LSKLYKNCPKAMK--- 271
Query: 480 EEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFEHNL 520
++ A C++ +RP + ++L + +H+L
Sbjct: 272 -------RLVADCVKKVKEERP---LFPQILSSIELLQHSL 302
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSFLAEVKTIGSI-HHQNLVRLIGF 301
+++G G +G V++G G A+K ++ G+ + E+ + HH+N+ G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 302 CAEKS------HNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
+K+ LV E+ GS+ L + + L + I +I +GL++LH+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGNTLKEEWIAYICREILRGLSHLHQ- 147
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-- 413
K++H DIK QN+LL N K+ DFG+S +D+ + T GTP ++APE ++
Sbjct: 148 --HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACD 204
Query: 414 ----SIITEKVDIYSFGVVMLEILCG 435
+ K D++S G+ +E+ G
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 241 NFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQNL 295
++ K+LGKG FG V + G A+K L I K +A E + + + H L
Sbjct: 13 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 296 VRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
L A ++H+ L V EY G L F S E + ++ + +I L YLH
Sbjct: 73 TALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ +++ DIK +N++LD + + K+ DFGL K D + + GTP YLAPE L
Sbjct: 128 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLE 183
Query: 414 -SIITEKVDIYSFGVVMLEILCGRKVF 439
+ VD + GVVM E++CGR F
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 241 NFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQNL 295
++ K+LGKG FG V + G A+K L I K +A E + + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 296 VRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
L A ++H+ L V EY G L F S E + ++ + +I L YLH
Sbjct: 68 TALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR---GTPGYLAPE 410
+ +++ DIK +N++LD + + K+ DFGL K D + TM+ GTP YLAPE
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----TMKXFCGTPEYLAPE 175
Query: 411 WLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
L + VD + GVVM E++CGR F
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 238 MTDNF--RKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLA---EVKTIGSIH 291
+DN+ ++ LGKG F V +T G + A K + + F E + +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY 351
H N+VRL E+S + LV++ + G L + R EF + I I + + Y
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSE-ADASHCIQQILESIAY 120
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
H + I+H ++KP+N+LL K+ADFGL+ I+ + S+ GTPGYL+
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 409 PEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
PE L ++ VDI++ GV++ +L G F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 246 LGKGGFGSVFEGTQTDGT-------KVAVKRLEGIGEINKS--FLAEVKTIGSIHHQNLV 296
LG G FG V+EG Q G +VAVK L + FL E I +HQN+V
Sbjct: 56 LGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWL-------FQRSDEFMLDWQQRKKIILDIAKGL 349
R IG + ++ E M G L +L Q S MLD + DIA G
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGC 171
Query: 350 TYLHEDCRQKILHLDIKPQNILLD---GNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGY 406
YL E+ +H DI +N LL AK+ DFG+++ D + +G
Sbjct: 172 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAM 224
Query: 407 LAPEWLS------SIITEKVDIYSFGVVMLEIL 433
L +W+ I T K D +SFGV++ EI
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 241 NFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQNL 295
++ K+LGKG FG V + G A+K L I K +A E + + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 296 VRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
L A ++H+ L V EY G L F S E + ++ + +I L YLH
Sbjct: 68 TALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ +++ DIK +N++LD + + K+ DFGL K D + + GTP YLAPE L
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLE 178
Query: 414 -SIITEKVDIYSFGVVMLEILCGRKVF 439
+ VD + GVVM E++CGR F
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAV+ ++ ++N S L EV+ + ++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFREVRIMKVLNHP 73
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L M + + R K I + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKF-RQIVSAVQY-- 128
Query: 354 EDCRQK-ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
C QK I+H D+K +N+LLD + N K+ADFG S + + G+P Y APE
Sbjct: 129 --CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDEFCGSPPYAAPELF 184
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 36/250 (14%)
Query: 210 NGADEIEEDYLDQV------PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGT 263
N D D LD GLP F + + +GKG +G V+ G+ G
Sbjct: 5 NVGDSTLADLLDHSCTSGSGSGLP--FLVQRTVARQITLLECVGKGRYGEVWRGSW-QGE 61
Query: 264 KVAVKRLEGIGEINKSFLAEVKTIGSI--HHQNLVRLIGFCAEKSHN----LLVYEYMPN 317
VAVK E KS+ E + ++ H+N++ I H+ L+ Y
Sbjct: 62 NVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 119
Query: 318 GSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC-----RQKILHLDIKPQNILL 372
GSL +L + LD +I+L IA GL +LH + + I H D+K +NIL+
Sbjct: 120 GSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 175
Query: 373 DGNFNAKVADFGLSKLIDQDQSQVVTTMR---GTPGYLAPEWLSSIIT-------EKVDI 422
N +AD GL+ + Q +Q+ GT Y+APE L I ++VDI
Sbjct: 176 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 235
Query: 423 YSFGVVMLEI 432
++FG+V+ E+
Sbjct: 236 WAFGLVLWEV 245
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 241 NFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQNL 295
++ K+LGKG FG V + G A+K L I K +A E + + + H L
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 296 VRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
L A ++H+ L V EY G L F S E + ++ + +I L YLH
Sbjct: 68 TALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR---GTPGYLAPE 410
+ +++ DIK +N++LD + + K+ DFGL K D + TM+ GTP YLAPE
Sbjct: 123 S---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----TMKXFCGTPEYLAPE 175
Query: 411 WLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
L + VD + GVVM E++CGR F
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 35/247 (14%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFL- 281
PG P+ + NF K +G+G G V T+ G +VAVK+++ + + L
Sbjct: 40 PGDPREY--------LANFIK-IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF 90
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKK 340
EV + HH N+V + +V E++ G+L D R +E +Q
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAT 145
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ L + + L+YLH Q ++H DIK +ILL + K++DFG + ++ + +
Sbjct: 146 VCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKXL 201
Query: 401 RGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCG-------------RKVFDRSQPEE 446
GTP ++APE +S + +VDI+S G++++E++ G R++ D P
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRV 261
Query: 447 EDMYLLS 453
+D++ +S
Sbjct: 262 KDLHKVS 268
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 15/210 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTK---VAVKRLEGIGEI--NKSFLAEVKTIGSIHHQNLVRLIG 300
LG G FGSV +G K VA+K L+ E + + E + + + + +VRLIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ +LV E G L ++L + +E + +++ ++ G+ YL E +
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE---KNF 131
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWLS-SIIT 417
+H D+ +N+LL AK++DFGLSK + D S G + APE ++ +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 418 EKVDIYSFGVVMLEILC-GRKVFDRSQPEE 446
+ D++S+GV M E L G+K + + + E
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSI--HHQNLVRLIGFCA 303
+GKG +G V+ G+ G VAVK E KS+ E + ++ H+N++ I
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIASDM 72
Query: 304 EKSHN----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC--- 356
H+ L+ Y GSL +L + LD +I+L IA GL +LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 357 --RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQ--VVTTMR-GTPGYLAPEW 411
+ I H D+K +NIL+ N +AD GL+ + Q +Q V R GT Y+APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 412 LSSIIT-------EKVDIYSFGVVMLEI 432
L I ++VDI++FG+V+ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSI--HHQNLVRLIGFCA 303
+GKG +G V+ G+ G VAVK E KS+ E + ++ H+N++ I
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENILGFIASDM 72
Query: 304 EKSHN----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC--- 356
H+ L+ Y GSL +L + LD +I+L IA GL +LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 357 --RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQ--VVTTMR-GTPGYLAPEW 411
+ I H D+K +NIL+ N +AD GL+ + Q +Q V R GT Y+APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 412 LSSIIT-------EKVDIYSFGVVMLEI 432
L I ++VDI++FG+V+ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 242 FRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKS----FLAEVKTIGSIHHQNLV 296
+ K+LGKG FG V + G A+K L+ + K L E + + + H L
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 211
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
L V EY G L F S E + + + +I L YLH +
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 267
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SI 415
+ +++ D+K +N++LD + + K+ DFGL K +D + + T GTP YLAPE L +
Sbjct: 268 -KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDND 325
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD + GVVM E++CGR F
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVRL 298
+G G +G+V++ G VA+K + EG+ +A ++ + + H N+VRL
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 299 IGFCAEKSHN-----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
+ CA + LV+E++ + L +L ++ L + K ++ +GL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQ--SQVVTTMRGTPGYLAPE- 410
+C I+H D+KP+NIL+ K+ADFGL+++ + VV T+ Y APE
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTL----WYRAPEV 182
Query: 411 WLSSIITEKVDIYSFGVVMLEILCGRKVF 439
L S VD++S G + E+ + +F
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVRL 298
+G G +G+V++ G VA+K + EG+ +A ++ + + H N+VRL
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 299 IGFCAEKSHN-----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
+ CA + LV+E++ + L +L ++ L + K ++ +GL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS--QVVTTMRGTPGYLAPE- 410
+C I+H D+KP+NIL+ K+ADFGL+++ + VV T+ Y APE
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL----WYRAPEV 182
Query: 411 WLSSIITEKVDIYSFGVVMLEILCGRKVF 439
L S VD++S G + E+ + +F
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 151
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + + T Y APE + S T+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 242 FRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKS----FLAEVKTIGSIHHQNLV 296
+ K+LGKG FG V + G A+K L+ + K L E + + + H L
Sbjct: 155 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 214
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
L V EY G L F S E + + + +I L YLH +
Sbjct: 215 ALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 270
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SI 415
+ +++ D+K +N++LD + + K+ DFGL K +D + + T GTP YLAPE L +
Sbjct: 271 -KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDND 328
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD + GVVM E++CGR F
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVRL 298
+G G +G+V++ G VA+K + EG+ +A ++ + + H N+VRL
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 299 IGFCAEKSHN-----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
+ CA + LV+E++ + L +L ++ L + K ++ +GL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS--QVVTTMRGTPGYLAPE- 410
+C I+H D+KP+NIL+ K+ADFGL+++ + VV T+ Y APE
Sbjct: 130 ANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTL----WYRAPEV 182
Query: 411 WLSSIITEKVDIYSFGVVMLEILCGRKVF 439
L S VD++S G + E+ + +F
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VA+K ++ ++N + L EV+ + ++H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT-QLNPTSLQKLFREVRIMKILNHP 74
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + L+ EY G + +L M + + R K I + Y H
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKF-RQIVSAVQYCH 131
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ ++I+H D+K +N+LLD + N K+ADFG S + + G P Y APE
Sbjct: 132 Q---KRIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPELFQ 186
Query: 414 SIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+G +G V + +VA+K++ + L E+K + H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + Y+ ++ L++ L + I +GL Y+H +LH
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLH 152
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLI--DQDQSQVVTTMRGTPGYLAPEWL--SSIITE 418
D+KP N+LL+ + K+ DFGL+++ D D + + T Y APE + S T+
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 419 KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
+DI+S G ++ E+L R +F ++ ++L I ++ED
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 21/229 (9%)
Query: 226 LPKRFSFEELKVMTD-NFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE--INKSFL 281
+PKR + + +D + +LG+G +G V T + G VA+K++E + L
Sbjct: 1 MPKRIVY---NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+K + H+N++ + S Y+ + L + ML +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ---DQSQVVT 398
I + + LH ++H D+KP N+L++ N + KV DFGL+++ID+ D S+
Sbjct: 118 IYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 399 TMRGTPGYLAPEWL--------SSIITEKVDIYSFGVVMLEILCGRKVF 439
G Y+A W S+ + +D++S G ++ E+ R +F
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 238 MTDNF--RKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLA---EVKTIGSIH 291
+DN+ ++ LGKG F V +T G + A K + + F E + +
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY 351
H N+VRL E+S + LV++ + G L + R EF + I I + + Y
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSE-ADASHCIQQILESIAY 143
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
H + I+H ++KP+N+LL K+ADFGL+ I+ + S+ GTPGYL+
Sbjct: 144 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 198
Query: 409 PEWLSS-IITEKVDIYSFGVVMLEILCGRKVF 439
PE L ++ VDI++ GV++ +L G F
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 244 KMLGKGGFGSVF--EGTQTDGTK------VAVKRL--EGIGEINKSFLAEVKTIGSI-HH 292
K LG+G FG V E D K VAVK L + + ++E++ + I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWL-------------FQRSDEFMLDWQQRK 339
+N++ L+G C + ++ Y G+L +L R E + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVT 398
+A+G+ YL QK +H D+ +N+L+ N K+ADFGL++ I+ D + T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 399 TMRGTPGYLAPEWL-SSIITEKVDIYSFGVVMLEIL 433
R ++APE L + T + D++SFGV+M EI
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 234 ELKVMTDNFRKMLGKGGFGSVF-----EGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG 288
+LK+ KMLGKG FG VF + Q K K + + + + + E + +
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 289 -SIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK 347
+ H L + K + V EY+ G L + Q +F D + +I
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKF--DLSRATFYAAEIIL 130
Query: 348 GLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK---LIDQDQSQVVTTMRGTP 404
GL +LH + I++ D+K NILLD + + K+ADFG+ K L D ++ GTP
Sbjct: 131 GLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC----GTP 183
Query: 405 GYLAPE-WLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEE 447
Y+APE L VD +SFGV++ E+L G+ F Q EEE
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEE 226
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 43/244 (17%)
Query: 234 ELKVMTDNFR----KMLGKGGFG--SVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTI 287
+L +M D+ R K +G G FG + Q + VAVK +E +I+++ E+
Sbjct: 11 DLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANEL-VAVKYIERGEKIDENVKREIINH 69
Query: 288 GSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR--------SDEFMLDWQQRK 339
S+ H N+VR +H +V EY G LF+R DE +QQ
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQ-- 123
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA--KVADFGLSK---LIDQDQS 394
+ G++Y H ++ H D+K +N LLDG+ K+ADFG SK L Q +S
Sbjct: 124 -----LISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS 175
Query: 395 QVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
V GTP Y+APE L + D++S GV + +L G F+ PEE +
Sbjct: 176 AV-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRK 228
Query: 453 SIFK 456
+I +
Sbjct: 229 TIHR 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVRLIG 300
+ LG+G G V + VAVK ++ ++ ++ E+ ++H+N+V+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSD-EFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
E + L EY G L F R + + + ++ + G+ YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IG 124
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLID-QDQSQVVTTMRGTPGYLAPEWLS--SII 416
I H DIKP+N+LLD N K++DFGL+ + ++ +++ M GT Y+APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDR 441
E VD++S G+V+ +L G +D+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 40/289 (13%)
Query: 244 KMLGKGGFGSVFEG--TQTDGT--KVAVKRLEG--IGEIN-KSFLAEVKTIGSIHHQNLV 296
+MLGKG FGSV E Q DG+ KVAVK L+ I + + FL E + H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 297 RLIGFCAEKSHN------LLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAK 347
+L+G +++ +M +G L +L + F L Q + ++DIA
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 348 GLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGY 406
G+ YL + +H D+ +N +L + VADFGLS K+ D + + +
Sbjct: 149 GMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 407 LAPEWLS-SIITEKVDIYSFGVVMLEILC-GRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
LA E L+ ++ T D+++FGV M EI+ G+ + + E YL+ + K + +
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECM 265
Query: 465 SDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGV 513
EEV ++M C +D +RPS + + LE +
Sbjct: 266 ---------------EEVYDLMY---QCWSADPKQRPSFTCLRMELENI 296
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 244 KMLGKGGFGSVFEGT------QTDGTKVAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNL 295
K LG+G FG V + T + T VAVK L+ + + L+E + ++H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWL---------------------FQRSDEFMLD 334
++L G C++ LL+ EY GSL +L DE L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 335 WQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS 394
I++G+ YL E ++H D+ +NIL+ K++DFGLS+ + ++ S
Sbjct: 149 MGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 395 QVVTTMRGTP-GYLAPEWL-SSIITEKVDIYSFGVVMLEILC 434
V + P ++A E L I T + D++SFGV++ EI+
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKR---LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFC 302
+GKG FG VF+G KV + LE + + E+ + + + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + ++ EY+ GS L + LD Q I+ +I KGL YLH +K +H
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS---EKKIH 127
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEKVD 421
DIK N+LL + K+ADFG++ + Q + T GTP ++APE + S K D
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 422 IYSFGVVMLEILCGRKVFDRSQP 444
I+S G+ +E+ G P
Sbjct: 187 IWSLGITAIELARGEPPHSELHP 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 247 GKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKS 306
+G FG V++ Q VAVK + + EV ++ + H+N+++ IG AEK
Sbjct: 33 ARGRFGCVWK-AQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG--AEKR 89
Query: 307 HN------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC---- 356
L+ + GSL +L ++ W + I +A+GL YLHED
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 357 ---RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR-GTPGYLAPEWL 412
+ I H DIK +N+LL N A +ADFGL+ + +S T + GT Y+APE L
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 413 SSIIT------EKVDIYSFGVVMLEILCGRKVFD--------------RSQPEEEDMYLL 452
I ++D+Y+ G+V+ E+ D P EDM +
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEV 265
Query: 453 SIFKKKAEEDKLSDLVDKHSN 473
+ KKK L D KH+
Sbjct: 266 VVHKKK--RPVLRDYWQKHAG 284
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTK---VAVKRLEGIGEI--NKSFLAEVKTIGSIHHQNLVRLIG 300
LG G FGSV +G K VA+K L+ E + + E + + + + +VRLIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
C ++ +LV E G L ++L + +E + +++ ++ G+ YL E +
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE---KNF 457
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT-P-GYLAPEWLS-SIIT 417
+H ++ +N+LL AK++DFGLSK + D S G P + APE ++ +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 418 EKVDIYSFGVVMLEILC-GRKVFDRSQPEE 446
+ D++S+GV M E L G+K + + + E
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 234 ELKVMTD----NFRKMLGKGGFGSVFEGTQTDGTK--VAVKRLEGIGEINKSFLAEVKTI 287
++ +M D +F K +G G FG V + TK VAVK +E I+++ E+
Sbjct: 12 DMPIMHDSDRYDFVKDIGSGNFG-VARLMRDKLTKELVAVKYIERGAAIDENVQREIINH 70
Query: 288 GSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQ----RSDEFMLDWQQRKKIIL 343
S+ H N+VR +H ++ EY G L + DE +QQ
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQ------ 124
Query: 344 DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA--KVADFGLSK---LIDQDQSQVVT 398
+ G++Y H +I H D+K +N LLDG+ K+ DFG SK L Q +S V
Sbjct: 125 -LLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-- 178
Query: 399 TMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
GTP Y+APE L + D++S GV + +L G F+ PEE Y +I
Sbjct: 179 ---GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE--DPEEPRDYRKTI 231
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 245 MLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLA-------EVKTIGSIHHQNLV 296
+LG+G +VF G + G A+K I SFL E + + ++H+N+V
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNI-----SFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 297 RLIGFCAEKS--HNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+L E + H +L+ E+ P GSL L + S+ + L + ++ D+ G+ +L E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 355 DCRQKILHLDIKPQNILL----DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
+ I+H +IKP NI+ DG K+ DFG ++ ++ D+ V ++ GT YL P+
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--SLYGTEEYLHPD 185
Query: 411 WLSSIITEK---------VDIYSFGVVMLEILCGR---KVFDRSQPEEEDMY 450
+ K VD++S GV G + F+ + +E MY
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKR---LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFC 302
+GKG FG VF+G KV + LE + + E+ + + + G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + ++ EY+ GS L + LD Q I+ +I KGL YLH +K +H
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS---EKKIH 147
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEKVD 421
DIK N+LL + K+ADFG++ + Q + T GTP ++APE + S K D
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIKQSAYDSKAD 206
Query: 422 IYSFGVVMLEILCGRKVFDRSQP 444
I+S G+ +E+ G P
Sbjct: 207 IWSLGITAIELARGEPPHSELHP 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 30/252 (11%)
Query: 238 MTDNFRKM--LGKGGFGSVFEGTQTD-GTKVAVKRL---EGIGEINKSFLAEVKTIGSIH 291
M + + K+ +G+G +G VF+ D G VA+K+ E I K L E++ + +
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNG---SLDRWLFQRSDEFMLDWQQRKKIILDIAKG 348
H NLV L+ K LV+EY + LDR +QR L K I +
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHL----VKSITWQTLQA 114
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
+ + H + +H D+KP+NIL+ + K+ DFG ++L+ S T Y +
Sbjct: 115 VNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRS 170
Query: 409 PEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
PE L + VD+++ G V E+L G ++ P + D+ L + +K L D
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLW----PGKSDVDQLYLIRK-----TLGD 221
Query: 467 LVDKHSNDMQSN 478
L+ +H +N
Sbjct: 222 LIPRHQQVFSTN 233
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 246 LGKGGFGSVFEGTQ-TDGTKVAVKRLEGIGEINK-SFLAEVKTIGSIHHQNLVRLIGFCA 303
LG G FG V T+ G A K + E +K + E++T+ + H LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+ + +++YE+M G L + ++ D + + + + KGL ++HE+ +HL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN---NYVHL 173
Query: 364 DIKPQNILLDGNFNA--KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEKV 420
D+KP+NI+ + K+ DFGL+ +D QS VTT GT + APE +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYT 231
Query: 421 DIYSFGVVMLEILCGRKVF 439
D++S GV+ +L G F
Sbjct: 232 DMWSVGVLSYILLSGLSPF 250
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 244 KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA-EVKTIGSIHHQNLVRLIGF 301
++LG G FG V + +T G K+A K ++ G +K + E+ + + H NL++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 302 CAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--DIAKGLTYLHEDCRQK 359
K+ +LV EY+ G LF R + + + I+ I +G+ ++H+
Sbjct: 155 FESKNDIVLVMEYVDGGE----LFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MY 207
Query: 360 ILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SI 415
ILHLD+KP+NIL N +A K+ DFGL++ + V GTP +LAPE ++
Sbjct: 208 ILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVNF--GTPEFLAPEVVNYDF 264
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
++ D++S GV+ +L G F
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 246 LGKGGFGSVFEGTQ-TDGTKVAVKRLEGIGEINK-SFLAEVKTIGSIHHQNLVRLIGFCA 303
LG G FG V T+ G A K + E +K + E++T+ + H LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+ + +++YE+M G L + ++ D + + + + KGL ++HE+ +HL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN---NYVHL 279
Query: 364 DIKPQNILLDGNFNA--KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEKV 420
D+KP+NI+ + K+ DFGL+ +D QS VTT GT + APE +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYT 337
Query: 421 DIYSFGVVMLEILCGRKVF 439
D++S GV+ +L G F
Sbjct: 338 DMWSVGVLSYILLSGLSPF 356
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 226 LPKRFSFEELKVMTD-NFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE--INKSFL 281
+PKR + + +D + +LG+G +G V T + G VA+K++E + L
Sbjct: 1 MPKRIVY---NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+K + H+N++ + S Y+ + L + ML +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD--------- 392
I + + LH ++H D+KP N+L++ N + KV DFGL+++ID+
Sbjct: 118 IYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
Q +T T Y APE + S+ + +D++S G ++ E+ R +F
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 21/235 (8%)
Query: 224 PGLPKRFSFEELKVMTDNF--RKMLGKGGFGSVF-----EGTQTDGTKVAVKRLEGIGEI 276
P L K ++K+ ++F KMLGKG FG VF + Q K K + + +
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD 60
Query: 277 NKSFLAEVKTIG-SIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDW 335
+ + E + + + H L + K + V EY+ G L + Q +F D
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKF--DL 117
Query: 336 QQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK--LIDQDQ 393
+ +I GL +LH + I++ D+K NILLD + + K+ADFG+ K ++ +
Sbjct: 118 SRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174
Query: 394 SQVVTTMRGTPGYLAPE-WLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEE 447
+ GTP Y+APE L VD +SFGV++ E+L G+ F Q EEE
Sbjct: 175 TNXFC---GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEE 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 242 FRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKS----FLAEVKTIGSIHHQNLV 296
+ K+LGKG FG V + G A+K L+ + K L E + + + H L
Sbjct: 14 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 73
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
L V EY G L F S E + + + +I L YLH +
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 129
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SI 415
+ +++ D+K +N++LD + + K+ DFGL K +D + + GTP YLAPE L +
Sbjct: 130 -KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDND 187
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD + GVVM E++CGR F
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 242 FRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKS----FLAEVKTIGSIHHQNLV 296
+ K+LGKG FG V + G A+K L+ + K L E + + + H L
Sbjct: 13 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 72
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
L V EY G L F S E + + + +I L YLH +
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 128
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SI 415
+ +++ D+K +N++LD + + K+ DFGL K +D + + GTP YLAPE L +
Sbjct: 129 -KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDND 186
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD + GVVM E++CGR F
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLA---------EVKTIGSIHHQN 294
K+LG+G FG VF + G+ ++L + + K+ L E + ++H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDA--RQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF 87
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-SDEFMLDWQQRKKIILDIAKGLTYLH 353
+V+L + L+ +++ G L F R S E M + K + ++A L +LH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
I++ D+KP+NILLD + K+ DFGLSK D + + GT Y+APE ++
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 414 SI-ITEKVDIYSFGVVMLEILCG 435
T+ D +SFGV+M E+L G
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 117/238 (49%), Gaps = 27/238 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYL 352
N+V+L+ ++ LV+E++ S+D F + + K + + +GL +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLA 408
H ++LH D+KPQN+L++ K+ADFGL++ + +VVT Y A
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRA 174
Query: 409 PEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
PE L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 245 MLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLA-------EVKTIGSIHHQNLV 296
+LG+G +VF G + G A+K I SFL E + + ++H+N+V
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNI-----SFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 297 RLIGFCAEKS--HNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+L E + H +L+ E+ P GSL L + S+ + L + ++ D+ G+ +L E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 355 DCRQKILHLDIKPQNILL----DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
+ I+H +IKP NI+ DG K+ DFG ++ ++ D+ V + GT YL P+
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--XLYGTEEYLHPD 185
Query: 411 WLSSIITEK---------VDIYSFGVVMLEILCGR---KVFDRSQPEEEDMY 450
+ K VD++S GV G + F+ + +E MY
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 217 EDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKVAVKRL----EG 272
+++L++ + K+ ++K + K++G+G FG V KV +L E
Sbjct: 54 DNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEM 113
Query: 273 IGEINKSFLAEVKTIGSIHHQNLVRLIGFCA--EKSHNLLVYEYMPNGSLDRWLFQRSDE 330
I + +F E + I + + V + FCA + + +V EYMP G L +
Sbjct: 114 IKRSDSAFFWEERDIMAFANSPWVVQL-FCAFQDDKYLYMVMEYMPGGDLVNLM----SN 168
Query: 331 FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLID 390
+ + + K ++ L +H ++H D+KP N+LLD + + K+ADFG +D
Sbjct: 169 YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 225
Query: 391 QDQSQVVTTMRGTPGYLAPEWLSS-----IITEKVDIYSFGVVMLEILCGRKVF 439
+ T GTP Y++PE L S + D +S GV + E+L G F
Sbjct: 226 ETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA-EVKTIGSIHHQNLVRLIGFCA 303
+G+G G+V+ G +VA++++ + K + E+ + + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+V EY+ GSL + E +D Q + + + L +LH + +++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDI 422
DIK NILL + + K+ DFG I +QS+ +TM GTP ++APE ++ KVDI
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 423 YSFGVVMLEILCGRKVFDRSQP 444
+S G++ +E++ G + P
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENP 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 242 FRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKS----FLAEVKTIGSIHHQNLV 296
+ K+LGKG FG V + G A+K L+ + K L E + + + H L
Sbjct: 12 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 71
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
L V EY G L F S E + + + +I L YLH +
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 127
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SI 415
+ +++ D+K +N++LD + + K+ DFGL K +D + + GTP YLAPE L +
Sbjct: 128 -KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDND 185
Query: 416 ITEKVDIYSFGVVMLEILCGRKVF 439
VD + GVVM E++CGR F
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 111/243 (45%), Gaps = 41/243 (16%)
Query: 234 ELKVMTDNFR----KMLGKGGFG-SVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG 288
+L +M D+ R K +G G FG + + VAVK +E +I+++ E+
Sbjct: 10 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR 69
Query: 289 SIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR--------SDEFMLDWQQRKK 340
S+ H N+VR +H +V EY G LF+R DE +QQ
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQ--- 122
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA--KVADFGLSK---LIDQDQSQ 395
+ G++Y H ++ H D+K +N LLDG+ K+ DFG SK L Q +S
Sbjct: 123 ----LISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 175
Query: 396 VVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
V GTP Y+APE L + D++S GV + +L G F+ PEE + +
Sbjct: 176 V-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRKT 228
Query: 454 IFK 456
I +
Sbjct: 229 IHR 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 29/239 (12%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYL 352
N+V+L+ ++ LV+E++ S+D F + + K + + +GL +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLA 408
H ++LH D+KPQN+L++ K+ADFGL++ + +VVT Y A
Sbjct: 122 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRA 173
Query: 409 PEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDM-YLLSIFKKKAEEDKL 464
PE L + VDI+S G + E++ R +F P + ++ L IF+ D++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF----PGDSEIDQLFRIFRTLGTPDEV 228
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 41/219 (18%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQ 293
+ LGKGGF +E T D +V ++ + KS L E+ S+ +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKV-----VPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILD--------- 344
++V GF + +V E SL L+ +R+K + +
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSL------------LELHKRRKAVTEPEARYFMRQ 150
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP 404
+G+ YLH + +++H D+K N+ L+ + + K+ DFGL+ I+ D + T+ GTP
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKTLCGTP 206
Query: 405 GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRS 442
Y+APE L + +VDI+S G ++ +L G+ F+ S
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLA---------EVKTIGSIHHQN 294
K+LG+G FG VF + G+ ++L + + K+ L E + ++H
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDA--RQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF 88
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-SDEFMLDWQQRKKIILDIAKGLTYLH 353
+V+L + L+ +++ G L F R S E M + K + ++A L +LH
Sbjct: 89 IVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
I++ D+KP+NILLD + K+ DFGLSK D + + GT Y+APE ++
Sbjct: 145 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 414 SI-ITEKVDIYSFGVVMLEILCG 435
T+ D +SFGV+M E+L G
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTK-VAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG+G V+ Q K A+K L+ + K E+ + + H N+++L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPNIIKLKEIFET 119
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLD 364
+ LV E + G L + ++ D K IL+ + YLHE+ I+H D
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILE---AVAYLHEN---GIVHRD 173
Query: 365 IKPQNILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-IITEKV 420
+KP+N+L + K+ADFGLSK+++ ++ T+ GTPGY APE L +V
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 421 DIYSFGVVMLEILCGRKVF 439
D++S G++ +LCG + F
Sbjct: 232 DMWSVGIITYILLCGFEPF 250
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 21/229 (9%)
Query: 226 LPKRFSFEELKVMTD-NFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE--INKSFL 281
+PKR + + +D + +LG+G +G V T + G VA+K++E + L
Sbjct: 1 MPKRIVY---NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+K + H+N++ + S Y+ + L + ML +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ---DQSQVVT 398
I + + LH ++H D+KP N+L++ N + KV DFGL+++ID+ D S+
Sbjct: 118 IYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 399 TMRGTPGYLAPEWL--------SSIITEKVDIYSFGVVMLEILCGRKVF 439
G ++A W S+ + +D++S G ++ E+ R +F
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLA---------EVKTIGSIHHQN 294
K+LG+G FG VF + G+ ++L + + K+ L E + ++H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDA--RQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF 87
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-SDEFMLDWQQRKKIILDIAKGLTYLH 353
+V+L + L+ +++ G L F R S E M + K + ++A L +LH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
I++ D+KP+NILLD + K+ DFGLSK D + + GT Y+APE ++
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 414 SI-ITEKVDIYSFGVVMLEILCG 435
T+ D +SFGV+M E+L G
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 241 NFR--KMLGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA----EVKTIGSIHHQ 293
N+R K +GKG F V G +VAVK ++ ++N S L EV+ ++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIXKVLNHP 73
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L + LV EY G + +L ++ + I + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG---RXKEKEARAKFRQIVSAVQY-- 128
Query: 354 EDCRQK-ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
C QK I+H D+K +N+LLD + N K+ADFG S + + G P Y APE
Sbjct: 129 --CHQKFIVHRDLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPELF 184
Query: 413 SSIITE--KVDIYSFGVVMLEILCGRKVFD 440
+ +VD++S GV++ ++ G FD
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 244 KMLGKGGFGSVFEGTQTD--GTK--VAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNLVR 297
++LG+G FG V+EG T+ G K VAVK + ++ + F++E + ++ H ++V+
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE-DC 356
LIG E+ ++ E P G L +L + + + L I K + YL +C
Sbjct: 74 LIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESINC 130
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SI 415
+H DI +NIL+ K+ DFGLS+ I+ + + R +++PE ++
Sbjct: 131 ----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 416 ITEKVDIYSFGVVMLEILC-GRKVF 439
T D++ F V M EIL G++ F
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 242 FRKMLGKGGFGSVFEGTQTD--GTK--VAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNL 295
++LG+G FG V+EG T+ G K VAVK + ++ + F++E + ++ H ++
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE- 354
V+LIG E+ ++ E P G L +L + + L L I K + YL
Sbjct: 88 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESI 144
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS- 413
+C +H DI +NIL+ K+ DFGLS+ I+ + + R +++PE ++
Sbjct: 145 NC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 414 SIITEKVDIYSFGVVMLEILC-GRKVF 439
T D++ F V M EIL G++ F
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKR---LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFC 302
+GKG FG VF+G KV + LE + + E+ + + + G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + ++ EY+ GS L + LD Q I+ +I KGL YLH +K +H
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS---EKKIH 142
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEKVD 421
DIK N+LL + K+ADFG++ + Q + GTP ++APE + S K D
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 422 IYSFGVVMLEILCGRKVFDRSQP 444
I+S G+ +E+ G P
Sbjct: 202 IWSLGITAIELARGEPPHSELHP 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL-----------AEVKTIGSIHH 292
++LGKGG+G VF+ + G ++ + + K+ + AE + + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTG--KIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH 80
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
+V LI L+ EY+ G L L +R FM D + +I+ L +L
Sbjct: 81 PFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACF--YLAEISMALGHL 137
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H+ + I++ D+KP+NI+L+ + K+ DFGL K D + V T GT Y+APE L
Sbjct: 138 HQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEIL 193
Query: 413 -SSIITEKVDIYSFGVVMLEILCGRKVF 439
S VD +S G +M ++L G F
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 27/238 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYL 352
N+V+L+ ++ LV+E++ S+D F + + K + + +GL +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLA 408
H ++LH D+KP+N+L++ K+ADFGL++ + +VVT Y A
Sbjct: 123 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRA 174
Query: 409 PEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
PE L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 229
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 242 FRKMLGKGGFGSVFEGTQTD--GTK--VAVKRLEGIGEIN--KSFLAEVKTIGSIHHQNL 295
++LG+G FG V+EG T+ G K VAVK + ++ + F++E + ++ H ++
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE- 354
V+LIG E+ ++ E P G L +L + + + L I K + YL
Sbjct: 76 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESI 132
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS- 413
+C +H DI +NIL+ K+ DFGLS+ I+ + + R +++PE ++
Sbjct: 133 NC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 414 SIITEKVDIYSFGVVMLEILC-GRKVF 439
T D++ F V M EIL G++ F
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + L + +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK----LTDDHVQFLIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKR---LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFC 302
+GKG FG VF+G KV + LE + + E+ + + + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ + ++ EY+ GS L + LD Q I+ +I KGL YLH +K +H
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS---EKKIH 127
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEKVD 421
DIK N+LL + K+ADFG++ + Q + GTP ++APE + S K D
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 422 IYSFGVVMLEILCGRKVFDRSQP 444
I+S G+ +E+ G P
Sbjct: 187 IWSLGITAIELARGEPPHSELHP 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYL 352
N+V+L+ ++ LV+E++ S+D F + + K + + +GL +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLA 408
H ++LH D+KP+N+L++ K+ADFGL++ + +VVT Y A
Sbjct: 121 HS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRA 172
Query: 409 PEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
PE L + VDI+S G + E++ R +F
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + +S + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KSQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL + D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR----WYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNA 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 148
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 202
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 203 MH--YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 93 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 145
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 146 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 93 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 145
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 146 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAE--KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKK 340
E+ + + H N+V+L+ + + H +V+E + G + + L Q +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP----LSEDQARF 141
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
D+ KG+ YLH QKI+H DIKP N+L+ + + K+ADFG+S + + T+
Sbjct: 142 YFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
Query: 401 RGTPGYLAPEWLS---SIITEK-VDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFK 456
GTP ++APE LS I + K +D+++ GV + + G+ F +E M L S K
Sbjct: 199 -GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF----MDERIMCLHSKIK 253
Query: 457 KKAEE-----DKLSDLVDKHSNDMQSNGEE--VVNMMKVAAWC 492
+A E D DL D + + N E VV +K+ W
Sbjct: 254 SQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE 304
LG+G +GSV++ + G VA+K++ ++ + + E+ + ++V+ G +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-QEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 305 KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLD 364
+ +V EY GS+ + R+ D + I+ KGL YLH + +H D
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLH---FMRKIHRD 150
Query: 365 IKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEKV-DIY 423
IK NILL+ +AK+ADFG++ + D + GTP ++APE + I V DI+
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 424 SFGVVMLEILCGRKVFDRSQP 444
S G+ +E+ G+ + P
Sbjct: 210 SLGITAIEMAEGKPPYADIHP 230
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLI- 299
+G G +GSV G K+AVK+L + I +++ E++ + + H+N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 300 ----GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 172
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 173 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 226
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ +T VDI+S G +M E+L GR +F
Sbjct: 227 MHYNMT--VDIWSVGCIMAELLTGRTLF 252
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 246 LGKGGFGSVFEG----TQTDGTKVAVKRLE----GIGEINKSFLAEVKTIGSIHHQNLVR 297
LG G FG V G VAVK L+ E F+ EV + S+ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G + V E P GSL L + F+L R + +A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTP-GYLAPEWLSS- 414
++ +H D+ +N+LL K+ DFGL + + Q D V+ R P + APE L +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 415 IITEKVDIYSFGVVMLEIL 433
+ D + FGV + E+
Sbjct: 190 TFSHASDTWMFGVTLWEMF 208
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 41/243 (16%)
Query: 234 ELKVMTDNFR----KMLGKGGFG-SVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG 288
+L +M D+ R K +G G FG + + VAVK +E +I + E+
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHR 70
Query: 289 SIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR--------SDEFMLDWQQRKK 340
S+ H N+VR +H +V EY G LF+R DE +QQ
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQ--- 123
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA--KVADFGLSK---LIDQDQSQ 395
+ G++Y H ++ H D+K +N LLDG+ K+ DFG SK L Q +S
Sbjct: 124 ----LISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 176
Query: 396 VVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
V GTP Y+APE L + D++S GV + +L G F+ PEE + +
Sbjct: 177 V-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRKT 229
Query: 454 IFK 456
I +
Sbjct: 230 IHR 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 246 LGKGGFGSVFEG----TQTDGTKVAVKRLE----GIGEINKSFLAEVKTIGSIHHQNLVR 297
LG G FG V G VAVK L+ E F+ EV + S+ H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G + V E P GSL L + F+L R + +A+G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 139
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTP-GYLAPEWLSS- 414
++ +H D+ +N+LL K+ DFGL + + Q D V+ R P + APE L +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 415 IITEKVDIYSFGVVMLEIL 433
+ D + FGV + E+
Sbjct: 200 TFSHASDTWMFGVTLWEMF 218
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 128 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 179
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 233
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 128 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 179
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 148
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 202
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 203 MH--YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 123 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 174
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + L + +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK----LTDDHVQFLIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL- 281
PG P+ + DNF K +G+G G V T ++ G VAVK+++ + + L
Sbjct: 19 PGDPRSY--------LDNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF 69
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKK 340
EV + H+N+V + +V E++ G+L D R +E +Q
Sbjct: 70 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAA 124
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ L + + L+ LH Q ++H DIK +ILL + K++DFG + ++ + +
Sbjct: 125 VCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXL 180
Query: 401 RGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
GTP ++APE +S + +VDI+S G++++E++ G + P
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL- 281
PG P+ + DNF K +G+G G V T ++ G VAVK+++ + + L
Sbjct: 15 PGDPRSY--------LDNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF 65
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKK 340
EV + H+N+V + +V E++ G+L D R +E +Q
Sbjct: 66 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAA 120
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ L + + L+ LH Q ++H DIK +ILL + K++DFG + ++ + +
Sbjct: 121 VCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXL 176
Query: 401 RGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
GTP ++APE +S + +VDI+S G++++E++ G + P
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 221
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 120/238 (50%), Gaps = 27/238 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDM-YLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F P + ++ L IF+ D++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF----PGDSEIDQLFRIFRTLGTPDEV 226
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 124 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 229
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 123 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 174
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 228
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 120 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 171
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG-SIHHQNLVRLIGFC 302
K+LG G G+V G VAVKR+ + + L E+K + S H N++R +C
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YC 76
Query: 303 AEKSHNLL-VYEYMPNGSLDRWLFQR--SDEFMLDWQQRKKIIL--DIAKGLTYLHEDCR 357
+E + L + + N +L + + SDE + ++ I L IA G+ +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 358 QKILHLDIKPQNILLDG-------------NFNAKVADFGLSKLIDQDQSQVVTTMR--- 401
KI+H D+KPQNIL+ N ++DFGL K +D QS T +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 402 GTPGYLAPEWLSSI--------ITEKVDIYSFGVVMLEILC-GRKVFDRSQPEEEDMYLL 452
GT G+ APE L +T +DI+S G V IL G+ F E ++ +
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI-IR 252
Query: 453 SIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVR 508
IF L ++ H + + ++++ M ++ D KRP+ V+R
Sbjct: 253 GIF-------SLDEMKCLHDRSLIAEATDLISQM------IDHDPLKRPTAMKVLR 295
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 242 FRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
++ +GKG FG V+ G + G +VAVK E + AE+ + H+N+ +GF
Sbjct: 8 LQESIGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 63
Query: 302 CAEKSHN-------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
A + + LV +Y +GSL F + + + + K+ L A GL +LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 119
Query: 355 DC-----RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ--DQSQVVTTMR-GTPGY 406
+ + I H D+K +NIL+ N +AD GL+ D D + R GT Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 407 LAPEWLSSIIT-------EKVDIYSFGVVMLEI 432
+APE L I ++ DIY+ G+V EI
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 203
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 204 MH--YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 246 LGKGGFGSVFEG----TQTDGTKVAVKRLE----GIGEINKSFLAEVKTIGSIHHQNLVR 297
LG G FG V G VAVK L+ E F+ EV + S+ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G + V E P GSL L + F+L R + +A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTP-GYLAPEWLSS- 414
++ +H D+ +N+LL K+ DFGL + + Q D V+ R P + APE L +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 415 IITEKVDIYSFGVVMLEIL 433
+ D + FGV + E+
Sbjct: 190 TFSHASDTWMFGVTLWEMF 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 120 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 171
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 125 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 176
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 91 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 143
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 144 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 240 DNFRKMLGK-GGFGSVFEGTQTDGTKVAVKRLEGIG--EINKSFLAEVKTIGSIHHQNLV 296
++F +++G+ G FG V++ + + +A ++ E + ++ E+ + S H N+V
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+L+ +++ ++ E+ G++D + + E L Q + + L YLH++
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN- 127
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII 416
KI+H D+K NIL + + K+ADFG+S + Q + GTP ++APE +
Sbjct: 128 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 417 TE------KVDIYSFGVVMLEI 432
++ K D++S G+ ++E+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 246 LGKGGFGSVFEG----TQTDGTKVAVKRLE----GIGEINKSFLAEVKTIGSIHHQNLVR 297
LG G FG V G VAVK L+ E F+ EV + S+ H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G + V E P GSL L + F+L R + +A+G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 133
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTP-GYLAPEWLSS- 414
++ +H D+ +N+LL K+ DFGL + + Q D V+ R P + APE L +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 415 IITEKVDIYSFGVVMLEIL 433
+ D + FGV + E+
Sbjct: 194 TFSHASDTWMFGVTLWEMF 212
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 226
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLAEVKTIGSI---------HHQNL 295
+G G +G+V++ G VA+K + + T+ + H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 296 VRLIGFCAEKSHN-----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
VRL+ CA + LV+E++ + L +L ++ L + K ++ +GL
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
+LH +C I+H D+KP+NIL+ K+ADFGL+++ + +T + T Y APE
Sbjct: 135 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVVVTLWYRAPE 189
Query: 411 -WLSSIITEKVDIYSFGVVMLEILCGRKVF 439
L S VD++S G + E+ + +F
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 154
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 208
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 209 MH--YNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 120 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 171
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 203
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 204 MH--YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 122 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 173
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 246 LGKGGFGSVFEG----TQTDGTKVAVKRLE----GIGEINKSFLAEVKTIGSIHHQNLVR 297
LG G FG V G VAVK L+ E F+ EV + S+ H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G + V E P GSL L + F+L R + +A+G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 133
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTP-GYLAPEWLSS- 414
++ +H D+ +N+LL K+ DFGL + + Q D V+ R P + APE L +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 415 IITEKVDIYSFGVVMLEIL 433
+ D + FGV + E+
Sbjct: 194 TFSHASDTWMFGVTLWEMF 212
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 246 LGKGGFGSVFEG----TQTDGTKVAVKRLE----GIGEINKSFLAEVKTIGSIHHQNLVR 297
LG G FG V G VAVK L+ E F+ EV + S+ H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G + V E P GSL L + F+L R + +A+G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 139
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTP-GYLAPEWLSS- 414
++ +H D+ +N+LL K+ DFGL + + Q D V+ R P + APE L +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 415 IITEKVDIYSFGVVMLEIL 433
+ D + FGV + E+
Sbjct: 200 TFSHASDTWMFGVTLWEMF 218
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 122 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 173
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 227
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 30/209 (14%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEK 305
+GKG FG V+ G + G +VAVK E + AE+ + H+N+ +GF A
Sbjct: 11 IGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGFIAAD 66
Query: 306 SHN-------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC-- 356
+ + LV +Y +GSL F + + + + K+ L A GL +LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 357 ---RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ--DQSQVVTTMR-GTPGYLAPE 410
+ I H D+K +NIL+ N +AD GL+ D D + R GT Y+APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 411 WLSSIIT-------EKVDIYSFGVVMLEI 432
L I ++ DIY+ G+V EI
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 120 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 171
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 122 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 173
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 227
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL- 281
PG P+ + DNF K +G+G G V T ++ G VAVK+++ + + L
Sbjct: 24 PGDPRSY--------LDNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF 74
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKK 340
EV + H+N+V + +V E++ G+L D R +E +Q
Sbjct: 75 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAA 129
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ L + + L+ LH Q ++H DIK +ILL + K++DFG + ++ + +
Sbjct: 130 VCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXL 185
Query: 401 RGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
GTP ++APE +S + +VDI+S G++++E++ G + P
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 230
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 125 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 176
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 230
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 246 LGKGGFGSVFEG----TQTDGTKVAVKRLE----GIGEINKSFLAEVKTIGSIHHQNLVR 297
LG G FG V G VAVK L+ E F+ EV + S+ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L G + V E P GSL L + F+L R + +A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTP-GYLAPEWLSS- 414
++ +H D+ +N+LL K+ DFGL + + Q D V+ R P + APE L +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 415 IITEKVDIYSFGVVMLEIL 433
+ D + FGV + E+
Sbjct: 190 TFSHASDTWMFGVTLWEMF 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 124 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR----WYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL- 281
PG P+ + DNF K +G+G G V T ++ G VAVK+++ + + L
Sbjct: 26 PGDPRSY--------LDNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF 76
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKK 340
EV + H+N+V + +V E++ G+L D R +E +Q
Sbjct: 77 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAA 131
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ L + + L+ LH Q ++H DIK +ILL + K++DFG + ++ + +
Sbjct: 132 VCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXL 187
Query: 401 RGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
GTP ++APE +S + +VDI+S G++++E++ G + P
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 232
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 242 FRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
++ +GKG FG V+ G + G +VAVK E + AE+ + H+N+ +GF
Sbjct: 46 LQESIGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 101
Query: 302 CAEKSHN-------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
A + + LV +Y +GSL F + + + + K+ L A GL +LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 157
Query: 355 DC-----RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ--DQSQVVTTMR-GTPGY 406
+ + I H D+K +NIL+ N +AD GL+ D D + R GT Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 407 LAPEWLSSIIT-------EKVDIYSFGVVMLEI 432
+APE L I ++ DIY+ G+V EI
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 145
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 199
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 200 MH--YNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 140
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 194
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 203
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 204 MH--YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 203
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 204 MH--YNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR----WYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA-EVKTIGSIHHQNLVRLIGFCA 303
+G+G G+V+ G +VA++++ + K + E+ + + N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+V EY+ GSL + E +D Q + + + L +LH + +++H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 141
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDI 422
+IK NILL + + K+ DFG I +QS+ +TM GTP ++APE ++ KVDI
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 423 YSFGVVMLEILCGRKVFDRSQP 444
+S G++ +E++ G + P
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENP 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 150
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 204
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 205 MH--YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 242 FRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
++ +GKG FG V+ G + G +VAVK E + AE+ + H+N+ +GF
Sbjct: 13 LQESIGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 68
Query: 302 CAEKSHN-------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
A + + LV +Y +GSL F + + + + K+ L A GL +LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 124
Query: 355 DC-----RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ--DQSQVVTTMR-GTPGY 406
+ + I H D+K +NIL+ N +AD GL+ D D + R GT Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 407 LAPEWLSSIIT-------EKVDIYSFGVVMLEI 432
+APE L I ++ DIY+ G+V EI
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 145
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 199
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR----WYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 145
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 199
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 200 MH--YNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 145
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 199
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 200 MH--YNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 148
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 202
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 203 MH--YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 155
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 209
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 210 MH--YNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 155
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 209
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 210 MH--YNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 155
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 209
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 210 MH--YNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 26/255 (10%)
Query: 246 LGKGGFGSVFEGTQTDGTK-VAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVRL 298
+G+G +G+VF+ + + VA+KR+ EG+ S L E+ + + H+N+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS---SALREICLLKELKHKNIVRL 66
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
LV+E+ + L ++ + + LD + K + + KGL + H +
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHS---R 120
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD----QSQVVTTMRGTPGYLAPEWLSS 414
+LH D+KPQN+L++ N K+A+FGL++ ++VVT P L + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL---FGAK 177
Query: 415 IITEKVDIYSFGVVMLEIL-CGRKVFDRSQPEEEDMYLLSIFKKKAEED--KLSDLVDKH 471
+ + +D++S G + E+ GR +F + +++ + + EE ++ L D
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 472 SNDMQSNGEEVVNMM 486
M +VN++
Sbjct: 238 PYPMYPATTSLVNVV 252
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 242 FRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
++ +GKG FG V+ G + G +VAVK E + AE+ + H+N+ +GF
Sbjct: 10 LQESIGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 65
Query: 302 CAEKSHN-------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
A + + LV +Y +GSL F + + + + K+ L A GL +LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 121
Query: 355 DC-----RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ--DQSQVVTTMR-GTPGY 406
+ + I H D+K +NIL+ N +AD GL+ D D + R GT Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 407 LAPEWLSSIIT-------EKVDIYSFGVVMLEI 432
+APE L I ++ DIY+ G+V EI
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 41/219 (18%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQ 293
+ LGKGGF +E T D +V ++ + KS L E+ S+ +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKV-----VPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILD--------- 344
++V GF + +V E SL L+ +R+K + +
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSL------------LELHKRRKAVTEPEARYFMRQ 150
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP 404
+G+ YLH + +++H D+K N+ L+ + + K+ DFGL+ I+ D + + GTP
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTP 206
Query: 405 GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRS 442
Y+APE L + +VDI+S G ++ +L G+ F+ S
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA-EVKTIGSIHHQNLVRLIGFCA 303
+G+G G+V+ G +VA++++ + K + E+ + + N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+V EY+ GSL + E +D Q + + + L +LH + +++H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 141
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDI 422
DIK NILL + + K+ DFG I +QS+ + M GTP ++APE ++ KVDI
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 423 YSFGVVMLEILCGRKVFDRSQP 444
+S G++ +E++ G + P
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENP 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 148
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 202
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 203 MH--YNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 142
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 196
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 197 MH--YNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 77 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 129
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 130 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 154
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 208
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 77 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 129
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 130 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 163
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 217
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 242 FRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
++ +GKG FG V+ G + G +VAVK E + AE+ + H+N+ +GF
Sbjct: 33 LQESIGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 88
Query: 302 CAEKSHN-------LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
A + + LV +Y +GSL F + + + + K+ L A GL +LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 144
Query: 355 DC-----RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ--DQSQVVTTMR-GTPGY 406
+ + I H D+K +NIL+ N +AD GL+ D D + R GT Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 407 LAPEWLSSIIT-------EKVDIYSFGVVMLEI 432
+APE L I ++ DIY+ G+V EI
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 153
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 154 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 207
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 208 MH--YNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 140
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 194
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 26/228 (11%)
Query: 236 KVMTDNFR--KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG---IGEINKSFLAEVKTIGS 289
++ DNF ++LGKG FG V + G AVK L+ + + + K I S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 290 I--HHQNLVRLIGFCAEKSHNLL--VYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+ +H L +L FC ++ + L V E++ G L + Q+S F D + + +I
Sbjct: 79 LARNHPFLTQL--FCCFQTPDRLFFVMEFVNGGDL-MFHIQKSRRF--DEARARFYAAEI 133
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR--GT 403
L +LH+ + I++ D+K N+LLD + K+ADFG+ K + VTT GT
Sbjct: 134 ISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGT 187
Query: 404 PGYLAPEWLSSII-TEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMY 450
P Y+APE L ++ VD ++ GV++ E+LCG F+ E+D++
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--EDDLF 233
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 86
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 141
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 195
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 196 MH--YNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA-EVKTIGSIHHQNLVRLIGFCA 303
+G+G G+V+ G +VA++++ + K + E+ + + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+V EY+ GSL + E +D Q + + + L +LH + +++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDI 422
DIK NILL + + K+ DFG I +QS+ + M GTP ++APE ++ KVDI
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 423 YSFGVVMLEILCGRKVFDRSQP 444
+S G++ +E++ G + P
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENP 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 162
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 216
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 217 MH--YNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 40/287 (13%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK----GLTYLHEDCRQ 358
K +V ++ SL L +F + K ++DIA+ G+ YLH +
Sbjct: 78 T-KPQLAIVTQWCEGSSLYHHLHASETKFEM------KKLIDIARQTARGMDYLHA---K 127
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----S 413
I+H D+K NI L + K+ DFGL+ + + S + G+ ++APE + S
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHSN 473
+ + + D+Y+FG+V+ E++ G+ + ++ ++ + + + LS +
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEMVGRGSLSPDLSKV------ 238
Query: 474 DMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFEHNL 520
+SN + M ++ A CL+ +RPS R+L + E L
Sbjct: 239 --RSNCPK--RMKRLMAECLKKKRDERPSFP---RILAEIEELAREL 278
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 83 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 135
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 136 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 139
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 193
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 73 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 125
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 126 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 139
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 193
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 194 MH--YNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEINKSFLA-EVKTIGSIHHQNLVRLIGFCA 303
+G+G G+V+ G +VA++++ + K + E+ + + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+V EY+ GSL + E +D Q + + + L +LH + +++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVDI 422
DIK NILL + + K+ DFG I +QS+ + M GTP ++APE ++ KVDI
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 423 YSFGVVMLEILCGRKVFDRSQP 444
+S G++ +E++ G + P
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENP 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 139
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR----WYRAPEIMLNW 193
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 194 MH--YNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 163
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 217
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 218 MH--YNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 166
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + +
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 220
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 41/219 (18%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL----------AEVKTIGSIHHQ 293
+ LGKGGF +E T D +V ++ + KS L E+ S+ +
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKV-----VPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILD--------- 344
++V GF + +V E SL L+ +R+K + +
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSL------------LELHKRRKAVTEPEARYFMRQ 134
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTP 404
+G+ YLH + +++H D+K N+ L+ + + K+ DFGL+ I+ D + + GTP
Sbjct: 135 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTP 190
Query: 405 GYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRS 442
Y+APE L + +VDI+S G ++ +L G+ F+ S
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 71 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 123
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 124 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 435 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 487
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 488 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 244 KMLGKGGFGSVFEG------TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG+V +G +K + LAE + + + +VR
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQR---SDEFMLDWQQRKKIILDIAKGLTYLHE 354
+IG C +S +LV E G L+++L Q D+ +++ ++ ++ G+ YL E
Sbjct: 436 MIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYLEE 488
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT--PGYLAPEWL 412
+H D+ +N+LL AK++DFGLSK + D++ G + APE +
Sbjct: 489 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 413 SSI-ITEKVDIYSFGVVMLEILC-GRKVF 439
+ + K D++SFGV+M E G+K +
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 32/210 (15%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWL--FQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
E+ +++ + ++ L+ + + +D+ + + +I I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHV------QFLIYQILRGLKYIH 138
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE--- 410
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE
Sbjct: 139 S---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIML 191
Query: 411 -WLSSIITEKVDIYSFGVVMLEILCGRKVF 439
W+ + VDI+S G +M E+L GR +F
Sbjct: 192 NWMH--YNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 162
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE W
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNW 216
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 217 MH--YNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYL 352
N+V+L+ ++ LV+E++ D F + + K + + +GL +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLA 408
H ++LH D+KPQN+L++ K+ADFGL++ + +VVT Y A
Sbjct: 123 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRA 174
Query: 409 PEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
PE L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 229
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKR-LEGIGEINKS 279
Q P P+ S+ + KV +G G FG V++ D G VA+K+ L+G N+
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR- 62
Query: 280 FLAEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 63 ---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V + + Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 177 EPNV--SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 26/255 (10%)
Query: 246 LGKGGFGSVFEGTQTDGTK-VAVKRL------EGIGEINKSFLAEVKTIGSIHHQNLVRL 298
+G+G +G+VF+ + + VA+KR+ EG+ S L E+ + + H+N+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS---SALREICLLKELKHKNIVRL 66
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
LV+E+ + L ++ + + LD + K + + KGL + H +
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHS---R 120
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAPEWLSS 414
+LH D+KPQN+L++ N K+ADFGL++ + ++VVT P L + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL---FGAK 177
Query: 415 IITEKVDIYSFGVVMLEIL-CGRKVFDRSQPEEEDMYLLSIFKKKAEED--KLSDLVDKH 471
+ + +D++S G + E+ R +F + +++ + + EE ++ L D
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 472 SNDMQSNGEEVVNMM 486
M +VN++
Sbjct: 238 PYPMYPATTSLVNVV 252
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 244 KMLGKGGFGSVFEGTQTD-----GTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRL 298
+ LGKGGF +E T D KV K + + E+ S+ + ++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILD---------IAKGL 349
GF + +V E SL L+ +R+K + + +G+
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSL------------LELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAP 409
YLH + +++H D+K N+ L+ + + K+ DFGL+ I+ D + + GTP Y+AP
Sbjct: 156 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAP 211
Query: 410 EWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRS 442
E L + +VDI+S G ++ +L G+ F+ S
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R +F LD ++ L YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 24/221 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLA---------EVKTIGSIHHQN 294
K+LG+G FG VF + T+ L + + K+ L E + ++H
Sbjct: 34 KVLGQGSFGKVFLVRKV--TRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPF 91
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-SDEFMLDWQQRKKIILDIAKGLTYLH 353
+V+L + L+ +++ G L F R S E M + K + ++A GL +LH
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK-LIDQDQSQVVTTMRGTPGYLAPEWL 412
I++ D+KP+NILLD + K+ DFGLSK ID ++ + GT Y+APE +
Sbjct: 148 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK--AYSFCGTVEYMAPEVV 202
Query: 413 SSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
+ + D +S+GV+M E+L G F + + +E M L+
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPF-QGKDRKETMTLI 242
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQNLVRLIGF 301
+G G +GSV + G KVA+K+L + K E+ + + H+N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 302 CAEKSHNLLVYEY---MPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
S Y++ MP D Q+ ++ + ++ + KGL Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---A 145
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-- 416
++H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + S +
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR----WYRAPEVILSWMHY 201
Query: 417 TEKVDIYSFGVVMLEILCGRKVF 439
+ VDI+S G +M E+L G+ +F
Sbjct: 202 NQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKR-LEGIGEINKS 279
Q P P+ S+ + KV +G G FG V++ D G VA+K+ L+G N+
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR- 62
Query: 280 FLAEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 63 ---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTL 119
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 177 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKR-LEGIGEINKS 279
Q P P+ S+ + KV +G G FG V++ D G VA+K+ L+G N+
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR- 62
Query: 280 FLAEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 63 ---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V + + Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 177 EPNV--SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 246 LGKGGFG------SVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG F V G + + K+L ++ E + + H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA--RDHQKLEREARICRLLKHPNIVRLH 87
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ- 358
+E+ H+ L+++ + G L + R D + IL+ LH C Q
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQM 140
Query: 359 KILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
++H D+KP+N+LL K+ADFGL+ ++ +Q Q GTPGYL+PE L
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKD 199
Query: 416 ITEK-VDIYSFGVVMLEILCGRKVF 439
K VD+++ GV++ +L G F
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 124 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL- 281
PG P+ + DNF K +G+G G V T ++ G VAVK+++ + + L
Sbjct: 69 PGDPRSY--------LDNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF 119
Query: 282 AEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKK 340
EV + H+N+V + +V E++ G+L D R +E +Q
Sbjct: 120 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAA 174
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTM 400
+ L + + L+ LH Q ++H DIK +ILL + K++DFG + ++ + +
Sbjct: 175 VCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXL 230
Query: 401 RGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
GTP ++APE +S + +VDI+S G++++E++ G + P
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 275
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 240 DNFRKM--LGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQN 294
D+F ++ LG G G V + + ++L E I + E++ + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWL--FQRSDEFMLDWQQRKKIILDIAKGLTYL 352
+V G + E+M GSLD+ L +R E +L K+ + + +GL YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYL 130
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMRGTPGYLAPEW 411
E + +I+H D+KP NIL++ K+ DFG+S +LID + V GT Y+APE
Sbjct: 131 RE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMAPER 184
Query: 412 LSSI-ITEKVDIYSFGVVMLEILCGR 436
L + + DI+S G+ ++E+ GR
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 166
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ D + V T Y APE W
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR----WYRAPEIMLNW 220
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 221 MH--YNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 240 DNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFL-AEVKTIGSIHHQNLVR 297
DNF K +G+G G V T ++ G VAVK+++ + + L EV + H+N+V
Sbjct: 154 DNFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 298 LIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+ +V E++ G+L D R +E +Q + L + + L+ LH
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHA-- 265
Query: 357 RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI- 415
Q ++H DIK +ILL + K++DFG + ++ + + GTP ++APE +S +
Sbjct: 266 -QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLP 323
Query: 416 ITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+VDI+S G++++E++ G + P
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPP 352
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 41/243 (16%)
Query: 234 ELKVMTDNFR----KMLGKGGFG-SVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG 288
+L +M D+ R K +G G FG + + VAVK +E +I+++ E+
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR 70
Query: 289 SIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR--------SDEFMLDWQQRKK 340
S+ H N+VR +H +V EY G LF+R DE +QQ
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQ--- 123
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA--KVADFGLSK---LIDQDQSQ 395
+ G++Y H ++ H D+K +N LLDG+ K+ FG SK L Q +S
Sbjct: 124 ----LISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST 176
Query: 396 VVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
V GTP Y+APE L + D++S GV + +L G F+ PEE + +
Sbjct: 177 V-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRKT 229
Query: 454 IFK 456
I +
Sbjct: 230 IHR 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL-----------AEVKTIGSIHH 292
++LGKGG+G VF+ + G ++ + + K+ + AE + + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTG--KIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH 80
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
+V LI L+ EY+ G L L +R FM D + +I+ L +L
Sbjct: 81 PFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACF--YLAEISMALGHL 137
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H+ + I++ D+KP+NI+L+ + K+ DFGL K D + V GT Y+APE L
Sbjct: 138 HQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEIL 193
Query: 413 -SSIITEKVDIYSFGVVMLEILCGRKVF 439
S VD +S G +M ++L G F
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIG--EINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
LG G FG V++ + + +A ++ E + ++ E+ + S H N+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+++ ++ E+ G++D + + E L Q + + L YLH++ KI+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITE----- 418
D+K NIL + + K+ADFG+S + Q + GTP ++APE + ++
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 419 -KVDIYSFGVVMLEI 432
K D++S G+ ++E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQNLVRLIGF 301
+G G +GSV + G KVA+K+L + K E+ + + H+N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 302 CAEKSHNLLVYEY---MPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
S Y++ MP D Q+ ++ + ++ + KGL Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---A 163
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSII-- 416
++H D+KP N+ ++ + K+ DFGL++ D + + V T Y APE + S +
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR----WYRAPEVILSWMHY 219
Query: 417 TEKVDIYSFGVVMLEILCGRKVF 439
+ VDI+S G +M E+L G+ +F
Sbjct: 220 NQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KP+N+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 123 S---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 174
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 228
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 163
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ DFGL++ D + V T Y APE + +
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR----WYRAPEIMLNW 217
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIG--EINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
LG G FG V++ + + +A ++ E + ++ E+ + S H N+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+++ ++ E+ G++D + + E L Q + + L YLH++ KI+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITE----- 418
D+K NIL + + K+ADFG+S + Q + GTP ++APE + ++
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAK-NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 419 -KVDIYSFGVVMLEI 432
K D++S G+ ++E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ D S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKD--FMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KP+N+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KP+N+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 122 S---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 173
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E L + VDI+S G + E++ R +F
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+K++ E + + + E+ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYL 352
N+V+L+ ++ LV+E++ D F + + K + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLA 408
H ++LH D+KPQN+L++ K+ADFGL++ + +VVT Y A
Sbjct: 119 HS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRA 170
Query: 409 PEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKL 464
PE L + VDI+S G + E++ R +F + E L IF+ D++
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG---DSEIDQLFRIFRTLGTPDEV 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 36/213 (16%)
Query: 246 LGKGGFG-SVFEGTQTDGTKVAVKRLEGIGEINKSFLA---------EVKTIGSIHHQNL 295
+G+G FG ++ + DG + +K EIN S ++ EV + ++ H N+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIK------EINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRW-------LFQRSDEFMLDWQQRKKIILDIAKG 348
V+ E +V +Y G L + LFQ ++ +LDW + I
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ--EDQILDW------FVQICLA 137
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
L ++H+ +KILH DIK QNI L + ++ DFG++++++ ++ GTP YL+
Sbjct: 138 LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLS 193
Query: 409 PEWL-SSIITEKVDIYSFGVVMLEILCGRKVFD 440
PE + K DI++ G V+ E+ + F+
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ D+GL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 258 TQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPN 317
T+++ K+++K F E++ I I ++ + G ++YEYM N
Sbjct: 74 TKSNNDKISIKSKYD------DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEN 127
Query: 318 GSL---DRWLFQRSDEF--MLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL 372
S+ D + F + + Q K II + +Y+H + + I H D+KP NIL+
Sbjct: 128 DSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILM 185
Query: 373 DGNFNAKVADFGLSK-LIDQDQSQVVTTMRGTPGYLAPEWL---SSIITEKVDIYSFGVV 428
D N K++DFG S+ ++D+ + RGT ++ PE+ SS KVDI+S G+
Sbjct: 186 DKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGIC 241
Query: 429 M 429
+
Sbjct: 242 L 242
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 119/238 (50%), Gaps = 27/238 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+ ++ E + + + E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDM-YLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F P + ++ L IF+ D++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF----PGDSEIDQLFRIFRTLGTPDEV 226
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 119/238 (50%), Gaps = 27/238 (11%)
Query: 240 DNFRKM--LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
+NF+K+ +G+G +G V++ + G VA+ ++ E + + + E+ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V+L+ ++ LV+E++ + L +++ S + K + + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKL----IDQDQSQVVTTMRGTPGYLAP 409
++LH D+KPQN+L++ K+ADFGL++ + +VVT Y AP
Sbjct: 120 S---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 171
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDM-YLLSIFKKKAEEDKL 464
E L + VDI+S G + E++ R +F P + ++ L IF+ D++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF----PGDSEIDQLFRIFRTLGTPDEV 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIG--EINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
LG G FG V++ + + +A ++ E + ++ E+ + S H N+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
+++ ++ E+ G++D + + E L Q + + L YLH++ KI+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITE----- 418
D+K NIL + + K+ADFG+S + Q GTP ++APE + ++
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 419 -KVDIYSFGVVMLEI 432
K D++S G+ ++E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 238 MTDNFR--KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEI----NKSFLAEVKTIGSIH 291
TD+++ + LGKG F V + T+ ++ ++ ++ E + +
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY 351
H N+VRL +E+ + LV++ + G L + R D I I + + +
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIHQILESVNH 145
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLA 408
+H+ I+H D+KP+N+LL K+ADFGL+ + Q + Q GTPGYL+
Sbjct: 146 IHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGFAGTPGYLS 201
Query: 409 PEWLSSIITEK-VDIYSFGVVMLEILCGRKVF 439
PE L K VDI++ GV++ +L G F
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 119/290 (41%), Gaps = 45/290 (15%)
Query: 170 GASPGGKETSHRKRIMGFILESXXXXXXXXXXXXXXXRKKNGADEIEE-DYLDQVPGLPK 228
G P G S R R F R K+G+ Q P P+
Sbjct: 38 GLVPRGSHMSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQ 97
Query: 229 RFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSFL-AEVKT 286
S+ + KV +G G FG V++ D G VA+K++ +K F E++
Sbjct: 98 EVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQI 145
Query: 287 IGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKK 340
+ + H N+VRL F EK + LV +Y+P + L K
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTT 399
+ + + L Y+H I H DIKPQN+LLD + K+ DFG +K +
Sbjct: 206 YMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------- 252
Query: 400 MRGTPG--------YLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+RG P Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 253 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 246 LGKGGFGSVFEGTQTDGTKV--AVKRLEG--IGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
+G+G +G V Q GT++ A K++ + ++++ F E++ + S+ H N++RL
Sbjct: 17 IGRGSWGEVKIAVQ-KGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLYET 74
Query: 302 CAEKSHNLLVYEYMPNGSL-----DRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+ + LV E G L + +F+ SD +I+ D+ + Y H
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVHKRVFRESDA--------ARIMKDVLSAVAYCH--- 123
Query: 357 RQKILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ + H D+KP+N L + K+ DFGL+ +++ T GTP Y++P+ L
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP--GKMMRTKVGTPYYVSPQVLE 181
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYL 451
+ + D +S GV+M +LCG F S P + ++ L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPF--SAPTDXEVML 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 246 LGKGGFGSVFEGTQ-TDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQNLVRLIG- 300
+G G +G+V G KVA+K+L + K E++ + + H+N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 301 FCAEKSHNLLV--YEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
F +++ + Y MP D + ++ D Q ++ + KGL Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF--LVYQMLKGLRYIHA---A 147
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----WLSS 414
I+H D+KP N+ ++ + K+ DFGL++ D + V T Y APE W+
Sbjct: 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR----WYRAPEVILNWMR- 202
Query: 415 IITEKVDIYSFGVVMLEILCGRKVFDRS 442
T+ VDI+S G +M E++ G+ +F S
Sbjct: 203 -YTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 50/292 (17%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK----GLTYLHEDCRQ 358
K +V ++ SL L +F + K ++DIA+ G+ YLH +
Sbjct: 90 T-KPQLAIVTQWCEGSSLYHHLHASETKFEM------KKLIDIARQTARGMDYLHA---K 139
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----S 413
I+H D+K NI L + K+ DFGL+ + S + G+ ++APE + S
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHS- 472
+ + + D+Y+FG+V+ E++ G+ + D++ ++V + S
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN----------------NRDQIIEMVGRGSL 243
Query: 473 ----NDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEFEHNL 520
+ ++SN + M ++ A CL+ +RPS R+L + E L
Sbjct: 244 SPDLSKVRSNCPK--RMKRLMAECLKKKRDERPSFP---RILAEIEELAREL 290
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 246 LGKGGFGSVFEGTQTDGTKV--AVKRLEG--IGEINKSFLAEVKTIGSIHHQNLVRLIGF 301
+G+G +G V Q GT++ A K++ + ++++ F E++ + S+ H N++RL
Sbjct: 34 IGRGSWGEVKIAVQ-KGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLYET 91
Query: 302 CAEKSHNLLVYEYMPNGSL-----DRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+ + LV E G L + +F+ SD +I+ D+ + Y H
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVVHKRVFRESDA--------ARIMKDVLSAVAYCH--- 140
Query: 357 RQKILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+ + H D+KP+N L + K+ DFGL+ +++ T GTP Y++P+ L
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP--GKMMRTKVGTPYYVSPQVLE 198
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYL 451
+ + D +S GV+M +LCG F S P + ++ L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPF--SAPTDXEVML 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 236 KVMTDNFRKMLGKGGFGSV-FEGTQTDGTKVAVKRLEGIGEINKSFL-AEVKTIGSIHHQ 293
+++ D++ K +G+G G V + G +VAVK ++ + + L EV + H
Sbjct: 44 RLLLDSYVK-IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N+V + ++ E++ G+L + Q L+ +Q + + + L YLH
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLH 158
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
Q ++H DIK +ILL + K++DFG I +D + + GTP ++APE +S
Sbjct: 159 A---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVIS 214
Query: 414 -SIITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
S+ +VDI+S G++++E++ G + P
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 244 KMLGKGGFGSVFEGTQ-TDGTKVAVKRLEGIGEINKSFL----AEVKTIGSIHHQNLVRL 298
++LG GG V D VAVK L + SF E + +++H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 299 --IGFCAEKSHNL--LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
G + L +V EY+ +L + E + ++ ++I D + L + H+
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR--GTPGYLAPEWL 412
+ I+H D+KP NIL+ KV DFG+++ I + V T GT YL+PE
Sbjct: 135 N---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 413 -SSIITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ + D+YS G V+ E+L G F P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R +F LD ++ L YL
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES--- 509
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 241 NFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEINKSFLAEVKT-----IGSIHHQN 294
+F K++GKG FG V + + AVK L+ + K + + + ++ H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 295 LVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL-DIAKGLTYL 352
LV L F + + L V +Y+ G L + QR F+ + R + +IA L YL
Sbjct: 101 LVGL-HFSFQTADKLYFVLDYINGGEL-FYHLQRERCFL---EPRARFYAAEIASALGYL 155
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H I++ D+KP+NILLD + + DFGL K + + + +T GTP YLAPE L
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTPEYLAPEVL 211
Query: 413 SSIITEK-VDIYSFGVVMLEILCGRKVF 439
++ VD + G V+ E+L G F
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 238 MTDNFR--KMLGKGGFGSVFE------GTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGS 289
MTD ++ + +GKG F V G + + K+L ++ E +
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSA--RDHQKLEREARICRL 59
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ H N+VRL +E+ + LV++ + G L + R D I I + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILEAV 116
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGY 406
+ H+ ++H D+KP+N+LL K+ADFGL+ + DQ Q GTPGY
Sbjct: 117 LHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGY 172
Query: 407 LAPEWLSSIITEK-VDIYSFGVVMLEILCGRKVF 439
L+PE L K VDI++ GV++ +L G F
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 230 FSFEELKVMTDNFRKMLGKGGFGSVFEGT-QTDGTKVAVKRLEGIGEI--NKSFLAEVKT 286
F+ E+LK + + +G+G +GSV + + G +AVKR+ + K L ++
Sbjct: 19 FTAEDLKDLGE-----IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV 73
Query: 287 I-GSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDR---WLFQRSDEFMLDWQQRKKII 342
+ S +V+ G + + E M + S D+ +++ D+ + + + KI
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPE-EILGKIT 131
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS-KLIDQDQSQVVTTMR 401
L K L +L E+ KI+H DIKP NILLD + N K+ DFG+S +L+D S T
Sbjct: 132 LATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD---SIAKTRDA 186
Query: 402 GTPGYLAPEWLSSIITE-----KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFK 456
G Y+APE + + + D++S G+ + E+ GR + + S+F
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN---------SVF- 236
Query: 457 KKAEEDKLSDLVDKHSNDMQSNGEE---VVNMMKVAAWCLESDFAKRP 501
D+L+ +V K SN EE + + CL D +KRP
Sbjct: 237 -----DQLTQVV-KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRP 278
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEIN-KSFLAEVKTIGSIHHQNLVRLIGFCA 303
LG G FG V++ + G A K +E E + ++ E++ + + H +V+L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
++ E+ P G++D + + + L Q + + + + L +LH ++I+H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHR 141
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL------SSIIT 417
D+K N+L+ + ++ADFG+S + Q + GTP ++APE + +
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 418 EKVDIYSFGVVMLEI 432
K DI+S G+ ++E+
Sbjct: 201 YKADIWSLGITLIEM 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R ++ LD ++ L YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 244 KMLGKGGFGSVFEGTQ-TDGTKVAVKRLEGIGEINKSFL----AEVKTIGSIHHQNLVRL 298
++LG GG V D VAVK L + SF E + +++H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 299 --IGFCAEKSHNL--LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
G + L +V EY+ +L + E + ++ ++I D + L + H+
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR--GTPGYLAPEWL 412
+ I+H D+KP NI++ KV DFG+++ I + V T GT YL+PE
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 413 -SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPE 445
+ + D+YS G V+ E+L G F P+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 48/292 (16%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG-SIHHQNLVRLIGFC 302
K+LG G G+V G VAVKR+ + + L E+K + S H N++R +C
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YC 94
Query: 303 AEKSHNLL-VYEYMPNGSLDRWLFQR--SDEFMLDWQQRKKIIL--DIAKGLTYLHEDCR 357
+E + L + + N +L + + SDE + ++ I L IA G+ +LH
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 151
Query: 358 QKILHLDIKPQNILLDG-------------NFNAKVADFGLSKLIDQDQSQVVTTMR--- 401
KI+H D+KPQNIL+ N ++DFGL K +D Q +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 402 GTPGYLAPEWLSSI----ITEKVDIYSFGVVMLEILC-GRKVFDRSQPEEEDMYLLSIFK 456
GT G+ APE L +T +DI+S G V IL G+ F E ++ + IF
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI-IRGIF- 269
Query: 457 KKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVR 508
L ++ H + + ++++ M ++ D KRP+ V+R
Sbjct: 270 ------SLDEMKCLHDRSLIAEATDLISQM------IDHDPLKRPTAMKVLR 309
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 48/292 (16%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG-SIHHQNLVRLIGFC 302
K+LG G G+V G VAVKR+ + + L E+K + S H N++R +C
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YC 94
Query: 303 AEKSHNLL-VYEYMPNGSLDRWLFQR--SDEFMLDWQQRKKIIL--DIAKGLTYLHEDCR 357
+E + L + + N +L + + SDE + ++ I L IA G+ +LH
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 151
Query: 358 QKILHLDIKPQNILLDG-------------NFNAKVADFGLSKLIDQDQSQVVTTMR--- 401
KI+H D+KPQNIL+ N ++DFGL K +D Q +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 402 GTPGYLAPEWLSSI----ITEKVDIYSFGVVMLEILC-GRKVFDRSQPEEEDMYLLSIFK 456
GT G+ APE L +T +DI+S G V IL G+ F E ++ + IF
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI-IRGIF- 269
Query: 457 KKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVR 508
L ++ H + + ++++ M ++ D KRP+ V+R
Sbjct: 270 ------SLDEMKCLHDRSLIAEATDLISQM------IDHDPLKRPTAMKVLR 309
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 21/233 (9%)
Query: 231 SFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKV-AVKRLEGIGEIN----KSFLAEVK 285
+ + +K+ NF +LGKG FG V + ++ A+K L+ I + + E +
Sbjct: 12 NLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR 71
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILD 344
+ + + + C + L V EY+ G L + Q+ +F Q +
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL-MYHIQQVGKF--KEPQAVFYAAE 128
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR--G 402
I+ GL +LH ++ I++ D+K N++LD + K+ADFG+ K + VTT G
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCG 182
Query: 403 TPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
TP Y+APE ++ + VD +++GV++ E+L G+ FD E+ED SI
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG---EDEDELFQSI 232
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 246 LGKGGFG------SVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLI 299
LGKG F V G + + K+L ++ E + + H N+VRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--RDHQKLEREARICRLLKHPNIVRLH 76
Query: 300 GFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ- 358
+E+ H+ L+++ + G L + R D + IL+ LH C Q
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQM 129
Query: 359 KILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
++H ++KP+N+LL K+ADFGL+ ++ +Q Q GTPGYL+PE L
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKD 188
Query: 416 ITEK-VDIYSFGVVMLEILCGRKVF 439
K VD+++ GV++ +L G F
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R ++ LD ++ L YL
Sbjct: 73 LIGVITENP-VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES--- 126
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEIN-KSFLAEVKTIGSIHHQNLVRLIGFCA 303
LG G FG V++ + G A K +E E + ++ E++ + + H +V+L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 304 EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHL 363
++ E+ P G++D + + + L Q + + + + L +LH ++I+H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHR 133
Query: 364 DIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL------SSIIT 417
D+K N+L+ + ++ADFG+S + Q + GTP ++APE + +
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 418 EKVDIYSFGVVMLEI 432
K DI+S G+ ++E+
Sbjct: 193 YKADIWSLGITLIEM 207
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R ++ LD ++ L YL
Sbjct: 78 LIGVITENP-VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES--- 131
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R ++ LD ++ L YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 29/241 (12%)
Query: 244 KMLGKGGFGSVFEGTQTDGTK-VAVKRLEGIGEIN-KSFLAEVKTIGSIHHQNLVRL--- 298
K LG GG G VF D K VA+K++ + K L E+K I + H N+V++
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 299 -----------IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK 347
+G E + +V EYM L ++ L + + + + +
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETD-----LANVLEQGPLLEEHARLFMYQLLR 131
Query: 348 GLTYLHEDCRQKILHLDIKPQNILLDG-NFNAKVADFGLSKLIDQDQSQVVTTMRG--TP 404
GL Y+H +LH D+KP N+ ++ + K+ DFGL++++D S G T
Sbjct: 132 GLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 405 GYLAPEWLSSI--ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEED 462
Y +P L S T+ +D+++ G + E+L G+ +F + E+ +L EED
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 463 K 463
+
Sbjct: 249 R 249
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R ++ LD ++ L YL
Sbjct: 79 LIGVITENP-VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES--- 132
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 41/243 (16%)
Query: 234 ELKVMTDNFR----KMLGKGGFG-SVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG 288
+L +M D+ R K +G G FG + + VAVK +E +I+++ E+
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR 70
Query: 289 SIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR--------SDEFMLDWQQRKK 340
S+ H N+VR +H +V EY G LF+R DE +QQ
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQ--- 123
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA--KVADFGLSK---LIDQDQSQ 395
+ G++Y H ++ H D+K +N LLDG+ K+ FG SK L Q +
Sbjct: 124 ----LISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT 176
Query: 396 VVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
V GTP Y+APE L + D++S GV + +L G F+ PEE + +
Sbjct: 177 V-----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRKT 229
Query: 454 IFK 456
I +
Sbjct: 230 IHR 232
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R ++ LD ++ L YL
Sbjct: 81 LIGVITENP-VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES--- 134
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 150
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ + + V T Y APE W
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIMLNW 204
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 205 MH--YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R ++ LD ++ L YL
Sbjct: 104 LIGVITENP-VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES--- 157
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ N K+ DFGLS+ ++ + + ++APE ++
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCA 303
K +GKG +G V+ G + G KVAVK E + E+ + H+N+ +GF A
Sbjct: 43 KQIGKGRYGEVWMG-KWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENI---LGFIA 98
Query: 304 EK-------SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+ L+ +Y NGSL +L + LD + K+ GL +LH +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 357 -----RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV---VTTMRGTPGYLA 408
+ I H D+K +NIL+ N +AD GL+ D ++V T GT Y+
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 409 PEWLSSIITEK-------VDIYSFGVVMLEI 432
PE L + D+YSFG+++ E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 150
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ + + V T Y APE W
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIMLNW 204
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 205 MH--YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 150
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DFGL++ + + V T Y APE W
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIMLNW 204
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 205 MH--YNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 244 KMLGKGGFGSVFEGTQ-TDGTKVAVKRLEGIGEINKSFL----AEVKTIGSIHHQNLVRL 298
++LG GG V D VAVK L + SF E + +++H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 299 --IGFCAEKSHNL--LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
G + L +V EY+ +L + E + ++ ++I D + L + H+
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR--GTPGYLAPEWL 412
+ I+H D+KP NI++ KV DFG+++ I + V T GT YL+PE
Sbjct: 135 N---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 413 -SSIITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ + D+YS G V+ E+L G F P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ FGL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR----WYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 32/237 (13%)
Query: 221 DQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQ-TDGTKVAVKRLEG-IGEINK 278
D +PG FE++ +T ++LG+G + V +G + AVK +E G
Sbjct: 4 DSLPG-----KFEDMYKLTS---ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS 55
Query: 279 SFLAEVKTIGSIH-HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQ 337
EV+T+ ++N++ LI F + + LV+E + GS+ L + + ++
Sbjct: 56 RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNERE 112
Query: 338 RKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQS 394
+++ D+A L +LH + I H D+KP+NIL + K+ DF L + + S
Sbjct: 113 ASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS 169
Query: 395 QV------VTTMRGTPGYLAPEWL------SSIITEKVDIYSFGVVMLEILCGRKVF 439
+TT G+ Y+APE + ++ ++ D++S GVV+ +L G F
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 40 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 87
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 88 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 147
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K +
Sbjct: 148 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--- 201
Query: 393 QSQVVTTMRGTPG--------YLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+RG P Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 202 -------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 46 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 93
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 153
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 211 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 46 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 93
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 153
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K +
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--- 207
Query: 393 QSQVVTTMRGTPG--------YLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+RG P Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 208 -------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 24 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 71
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 131
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 189 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R +F LD ++ L YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES--- 129
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ K+ DFGLS+ ++ + + ++APE ++
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 20 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 67
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 68 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 127
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 128 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 184
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 185 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 31 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 78
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 79 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 138
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 139 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 195
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 196 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 236 KVMTDNF--RKMLGKGGFGSV---FE--GTQTDGTKVAVKRLEGIGEINKSFLA-----E 283
K + D + K LG G G V FE + K+ KR IG ++ A E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKII 342
++ + ++H ++++ F + + +V E M G L D+ + + L K
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR----LKEATCKLYF 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTT 399
+ + YLHE+ I+H D+KP+N+LL K+ DFG SK++ + + ++ T
Sbjct: 121 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 400 MRGTPGYLAPEWLSSIIT----EKVDIYSFGVVMLEILCGRKVF 439
+ GTP YLAPE L S+ T VD +S GV++ L G F
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ DF L++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 236 KVMTDNF--RKMLGKGGFGSV---FE--GTQTDGTKVAVKRLEGIGEINKSFLA-----E 283
K + D + K LG G G V FE + K+ KR IG ++ A E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKII 342
++ + ++H ++++ F + + +V E M G L D+ + + L K
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR----LKEATCKLYF 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTT 399
+ + YLHE+ I+H D+KP+N+LL K+ DFG SK++ + + ++ T
Sbjct: 121 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 400 MRGTPGYLAPEWLSSIIT----EKVDIYSFGVVMLEILCGRKVF 439
+ GTP YLAPE L S+ T VD +S GV++ L G F
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 48 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 95
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 96 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 155
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K +
Sbjct: 156 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--- 209
Query: 393 QSQVVTTMRGTPG--------YLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+RG P Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 210 -------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 236 KVMTDNF--RKMLGKGGFGSV---FE--GTQTDGTKVAVKRLEGIGEINKSFLA-----E 283
K + D + K LG G G V FE + K+ KR IG ++ A E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKII 342
++ + ++H ++++ F + + +V E M G L D+ + + L K
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR----LKEATCKLYF 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTT 399
+ + YLHE+ I+H D+KP+N+LL K+ DFG SK++ + + ++ T
Sbjct: 121 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 400 MRGTPGYLAPEWLSSIIT----EKVDIYSFGVVMLEILCGRKVF 439
+ GTP YLAPE L S+ T VD +S GV++ L G F
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 236 KVMTDNF--RKMLGKGGFGSV---FE--GTQTDGTKVAVKRLEGIGEINKSFLA-----E 283
K + D + K LG G G V FE + K+ KR IG ++ A E
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKII 342
++ + ++H ++++ F + + +V E M G L D+ + + L K
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR----LKEATCKLYF 126
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTT 399
+ + YLHE+ I+H D+KP+N+LL K+ DFG SK++ + + ++ T
Sbjct: 127 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 181
Query: 400 MRGTPGYLAPEWLSSIIT----EKVDIYSFGVVMLEILCGRKVF 439
+ GTP YLAPE L S+ T VD +S GV++ L G F
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 236 KVMTDNF--RKMLGKGGFGSV---FE--GTQTDGTKVAVKRLEGIGEINKSFLA-----E 283
K + D + K LG G G V FE + K+ KR IG ++ A E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKII 342
++ + ++H ++++ F + + +V E M G L D+ + + L K
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR----LKEATCKLYF 119
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTT 399
+ + YLHE+ I+H D+KP+N+LL K+ DFG SK++ + + ++ T
Sbjct: 120 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 174
Query: 400 MRGTPGYLAPEWLSSIIT----EKVDIYSFGVVMLEILCGRKVF 439
+ GTP YLAPE L S+ T VD +S GV++ L G F
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 75/260 (28%)
Query: 246 LGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVRLIGFC 302
+G+GGFG VFE + D A+KR+ + + EVK + + H +VR
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 303 ----AEKSHNLLVYEYMPNGSLDRWL------------FQRSDEF--------------- 331
EK + ++ + S D L +R D F
Sbjct: 74 LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133
Query: 332 --------------MLDWQQRK------------KIILDIAKGLTYLHEDCRQKILHLDI 365
+ DW R+ I + IA+ + +LH + ++H D+
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS---KGLMHRDL 190
Query: 366 KPQNILLDGNFNAKVADFGLSKLIDQDQSQ--VVTTMR---------GTPGYLAPEWL-S 413
KP NI + KV DFGL +DQD+ + V+T M GT Y++PE +
Sbjct: 191 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG 250
Query: 414 SIITEKVDIYSFGVVMLEIL 433
+ + KVDI+S G+++ E+L
Sbjct: 251 NNYSHKVDIFSLGLILFELL 270
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 17 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 64
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 65 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 124
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K +
Sbjct: 125 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--- 178
Query: 393 QSQVVTTMRGTPG--------YLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+RG P Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 179 -------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 23/244 (9%)
Query: 207 RKKNGADEIEEDYLDQVPGLPK-RFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKV 265
RK D Y D + + R E+ +V+ K++G+G FG V KV
Sbjct: 42 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVV-----KVIGRGAFGEVQLVRHKSTRKV 96
Query: 266 AVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSL 320
+L E I + +F E + I + + V + + + L +V EYMP G L
Sbjct: 97 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 156
Query: 321 DRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKV 380
+ + + + + ++ L +H +H D+KP N+LLD + + K+
Sbjct: 157 VNLM----SNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKL 209
Query: 381 ADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-----IITEKVDIYSFGVVMLEILCG 435
ADFG ++++ T GTP Y++PE L S + D +S GV + E+L G
Sbjct: 210 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
Query: 436 RKVF 439
F
Sbjct: 270 DTPF 273
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 238 MTDNFR--KMLGKGGFGSVFE------GTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGS 289
MTD ++ + LGKG F V G + + K+L ++ E +
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA--RDHQKLEREARICRL 59
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ H N+VRL +E+ + LV++ + G L + R D I I + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESV 116
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGY 406
+ H + I+H D+KP+N+LL K+ADFGL+ + DQ Q GTPGY
Sbjct: 117 NHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGY 172
Query: 407 LAPEWLSSIITEK-VDIYSFGVVMLEILCGRKVF 439
L+PE L K VD+++ GV++ +L G F
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 24 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 71
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 131
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 189 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----W 411
I+H D+KP N+ ++ + K+ D GL++ D + + V T Y APE W
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 412 LSSIITEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MH--YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 25 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 72
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 73 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 132
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 133 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 189
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V + + Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 190 EPNV--SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 50 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 97
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 98 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 157
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K +
Sbjct: 158 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--- 211
Query: 393 QSQVVTTMRGTPG--------YLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+RG P Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 212 -------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 30/241 (12%)
Query: 247 GKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKS 306
+G FG V++ Q VAVK + + E+ + + H+NL++ I ++
Sbjct: 24 ARGRFGCVWK-AQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA-AEKRG 81
Query: 307 HNL-----LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED---CRQ 358
NL L+ + GSL +L ++ W + + +++GL+YLHED CR
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 359 K-----ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR-GTPGYLAPEWL 412
+ I H D K +N+LL + A +ADFGL+ + + T + GT Y+APE L
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 413 SSIIT------EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSD 466
I ++D+Y+ G+V+ E++ K D D Y+L ++ + L +
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPV----DEYMLPFEEEIGQHPSLEE 253
Query: 467 L 467
L
Sbjct: 254 L 254
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 59
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 177 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 23/244 (9%)
Query: 207 RKKNGADEIEEDYLDQVPGLPK-RFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKV 265
RK D Y D + + R E+ +V+ K++G+G FG V KV
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVV-----KVIGRGAFGEVQLVRHKSTRKV 101
Query: 266 AVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSL 320
+L E I + +F E + I + + V + + + L +V EYMP G L
Sbjct: 102 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 161
Query: 321 DRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKV 380
+ + + + + ++ L +H +H D+KP N+LLD + + K+
Sbjct: 162 VNLM----SNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKL 214
Query: 381 ADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-----IITEKVDIYSFGVVMLEILCG 435
ADFG ++++ T GTP Y++PE L S + D +S GV + E+L G
Sbjct: 215 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Query: 436 RKVF 439
F
Sbjct: 275 DTPF 278
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ D GL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV----ATRWYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 59
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 177 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 13 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 60
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 61 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 120
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 121 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 177
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 178 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 43/306 (14%)
Query: 232 FEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEIN-KSFLAEVKTIGSI 290
FE+L++ +++GKG FG V+ G + + +E E K+F EV
Sbjct: 32 FEQLEI-----GELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
H+N+V +G C H ++ +L + R + +LD + ++I +I KG+
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTL--YSVVRDAKIVLDVNKTRQIAQEIVKGMG 144
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS----QVVTTMRGTPGY 406
YLH + ILH D+K +N+ D N + DFGL + Q+ + G +
Sbjct: 145 YLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCH 200
Query: 407 LAPEWLSSI----------ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFK 456
LAPE + + ++ D+++ G + E L R+ ++QP E ++ +
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPAEAIIWQMGTGM 259
Query: 457 KKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTEF 516
K LS + G+E+ +++ + W E + +RP+ + ++ +LE + +
Sbjct: 260 K----PNLSQI---------GMGKEISDIL-LFCWAFEQE--ERPTFTKLMDMLEKLPKR 303
Query: 517 EHNLHY 522
L +
Sbjct: 304 NRRLSH 309
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 59
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V + + Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 177 EPNV--SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 52/296 (17%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG-SIHHQNLVRLIGFC 302
K+LG G G+V G VAVKR+ + + L E+K + S H N++R +C
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YC 76
Query: 303 AEKSHNLL-VYEYMPNGSLDRWLFQR--SDEFMLDWQQRKKIIL--DIAKGLTYLHEDCR 357
+E + L + + N +L + + SDE + ++ I L IA G+ +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 358 QKILHLDIKPQNILLDG-------------NFNAKVADFGLSKLIDQDQSQVVTTMR--- 401
KI+H D+KPQNIL+ N ++DFGL K +D Q +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 402 GTPGYLAPEWLSSI--------ITEKVDIYSFGVVMLEILC-GRKVFDRSQPEEEDMYLL 452
GT G+ APE L +T +DI+S G V IL G+ F E ++ +
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI-IR 252
Query: 453 SIFKKKAEEDKLSDLVDKHSNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVR 508
IF L ++ H + + ++++ M ++ D KRP+ V+R
Sbjct: 253 GIF-------SLDEMKCLHDRSLIAEATDLISQM------IDHDPLKRPTAMKVLR 295
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 16 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 63
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 64 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 123
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 124 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 180
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 181 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 238 MTDNFR--KMLGKGGFGSVFE------GTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGS 289
MTD ++ + LGKG F V G + + K+L ++ E +
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA--RDHQKLEREARICRL 59
Query: 290 IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
+ H N+VRL +E+ + LV++ + G L + R D I I + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESV 116
Query: 350 TYLHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPGY 406
+ H + I+H D+KP+N+LL K+ADFGL+ + DQ Q GTPGY
Sbjct: 117 NHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGY 172
Query: 407 LAPEWLSSIITEK-VDIYSFGVVMLEILCGRKVF 439
L+PE L K VD+++ GV++ +L G F
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFL-AEVKTIGSIHHQNLVRLIGFC 302
K++G G FG VF+ + +VA+K++ +K F E++ + + H N+V L F
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQ----DKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 303 ---AEKSHNL---LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL------DIAKGLT 350
+K + LV EY+P R+ +Q ++L + + L
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPET------VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAP 409
Y+H I H DIKPQN+LLD K+ DFG +K++ + V Y AP
Sbjct: 156 YIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAP 210
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E + ++ T +DI+S G VM E++ G+ +F
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 27/246 (10%)
Query: 207 RKKNGADEIEEDYLDQVPGLPK-RFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTKV 265
RK D Y D + + R E+ +V+ K++G+G FG V KV
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVV-----KVIGRGAFGEVQLVRHKSTRKV 101
Query: 266 AVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSL 320
+L E I + +F E + I + + V + + + L +V EYMP G L
Sbjct: 102 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 161
Query: 321 DRWL--FQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA 378
+ + +++ + + LD + ++H D +KP N+LLD + +
Sbjct: 162 VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD---------VKPDNMLLDKSGHL 212
Query: 379 KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-----IITEKVDIYSFGVVMLEIL 433
K+ADFG ++++ T GTP Y++PE L S + D +S GV + E+L
Sbjct: 213 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
Query: 434 CGRKVF 439
G F
Sbjct: 273 VGDTPF 278
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV T G +VAVK+L + I +++ E++ + + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 301 FCA-----EKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
E+ +++ + ++ L+ + + + D Q +I I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF--LIYQILRGLKYIHS- 143
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP N+ ++ + K+ D GL++ D + + V T Y APE + +
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR----WYRAPEIMLNW 197
Query: 416 I--TEKVDIYSFGVVMLEILCGRKVF 439
+ + VDI+S G +M E+L GR +F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEV------KTIGSIHH 292
+LGKGGFG+VF G + TD +VA+K R+ G ++ S + K H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 293 QNLVRLIGFCAEKSHNLLVYEY-MPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY 351
++RL+ + + +LV E +P L ++ ++ L + + + +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQH 154
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFN-AKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
H + ++H DIK +NIL+D AK+ DFG L+ + T GT Y PE
Sbjct: 155 CHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPE 208
Query: 411 WLS--SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
W+S ++S G+++ +++CG F+R Q
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ 243
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 47/283 (16%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK----GLTYLHEDCRQ 358
+V ++ SL L +F + K ++DIA+ G+ YLH +
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHLHASETKFEM------KKLIDIARQTARGMDYLHA---K 139
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----S 413
I+H D+K NI L + K+ DFGL+ + S + G+ ++APE + S
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKHS- 472
+ + + D+Y+FG+V+ E++ G+ + D++ ++V + S
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN----------------NRDQIIEMVGRGSL 243
Query: 473 ----NDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
+ ++SN + M ++ A CL+ +RPS ++ +E
Sbjct: 244 SPDLSKVRSNCPK--RMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 244 KMLGKGGFGSVFEGT----QTDGTKVAVKRLEGIGE--INKSFLAEVKTIGSIHHQNLVR 297
+ +G+G FG V +G + VA+K + + + FL E T+ H ++V+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
LIG E ++ E G L +L R +F LD ++ L YL
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES--- 509
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SII 416
++ +H DI +N+L+ K+ DFGLS+ ++ + + ++APE ++
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 417 TEKVDIYSFGVVMLEIL 433
T D++ FGV M EIL
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 24/199 (12%)
Query: 246 LGKGGFGSVFEGTQTDGT-KVAVKRLEGIGEINKS----FLAEVKTIGSIHHQNLVRLI- 299
+G+G F +V++G T+ T +VA L+ ++ KS F E + + + H N+VR
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQD-RKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 300 ---GFCAEKSHNLLVYEYMPNGSLDRWLFQ---RSDEFMLDWQQRKKIILDIAKGLTYLH 353
K +LV E +G+L +L + + + W ++ I KGL +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFLH 146
Query: 354 EDCRQKILHLDIKPQNILLDG-NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
I+H D+K NI + G + K+ D GL+ L ++ + GTP + APE
Sbjct: 147 TRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXY 202
Query: 413 SSIITEKVDIYSFGVVMLE 431
E VD+Y+FG LE
Sbjct: 203 EEKYDESVDVYAFGXCXLE 221
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K +G G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EYMP G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D KVADFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K +G G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EYMP G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D KVADFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 222 QVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEINKSF 280
Q P P+ S+ + KV +G G FG V++ D G VA+K++ +K F
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRF 59
Query: 281 L-AEVKTIGSIHHQNLVRLIGF---CAEKSHNL---LVYEYMPNGSLDRWLFQRSDEFML 333
E++ + + H N+VRL F EK + LV +Y+P + L
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTL 119
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQD 392
K + + + L Y+H I H DIKPQN+LLD + K+ DFG +K + +
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 393 QSQVVTTMRGTPGYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
+ V Y APE + ++ T +D++S G V+ E+L G+ +F
Sbjct: 177 EPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 234 ELKVMTDNF--RKMLGKGGFGSVFEGTQTDGTKVAVKRL-------EGIGEINKSFLA-- 282
EL M + ++ + G +G+V G ++G VA+KR+ + ++ SFL
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 283 ---EVKTIGSIHHQNLVRL----IGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLD 334
E++ + HH N++ L + F H L LV E M D ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM---RTDLAQVIHDQRIVIS 132
Query: 335 WQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK--LIDQD 392
Q + + I GL LHE ++H D+ P NILL N + + DF L++ D +
Sbjct: 133 PQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 393 QSQVVTTMRGTPGYLAPEWLSSI--ITEKVDIYSFGVVMLEILCGRKVF 439
++ VT Y APE + T+ VD++S G VM E+ + +F
Sbjct: 190 KTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 234 ELKVMTDNF--RKMLGKGGFGSVFEGTQTDGTKVAVKRL-------EGIGEINKSFLA-- 282
EL M + ++ + G +G+V G ++G VA+KR+ + ++ SFL
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 283 ---EVKTIGSIHHQNLVRL----IGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLD 334
E++ + HH N++ L + F H L LV E M D ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM---RTDLAQVIHDQRIVIS 132
Query: 335 WQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK--LIDQD 392
Q + + I GL LHE ++H D+ P NILL N + + DF L++ D +
Sbjct: 133 PQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 393 QSQVVTTMRGTPGYLAPEWLSSI--ITEKVDIYSFGVVMLEILCGRKVF 439
++ VT Y APE + T+ VD++S G VM E+ + +F
Sbjct: 190 KTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 236 KVMTDNF--RKMLGKGGFGSV---FE--GTQTDGTKVAVKRLEGIGEINKSFLA-----E 283
K + D + K LG G G V FE + ++ KR IG ++ A E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKII 342
++ + ++H ++++ F + + +V E M G L D+ + + L K
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR----LKEATCKLYF 245
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTT 399
+ + YLHE+ I+H D+KP+N+LL K+ DFG SK++ + + ++ T
Sbjct: 246 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 300
Query: 400 MRGTPGYLAPEWLSSIIT----EKVDIYSFGVVMLEILCGRKVF 439
+ GTP YLAPE L S+ T VD +S GV++ L G F
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 296 VRLIGFCAEKSHNLLV-YEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
V+L FC + L Y NG L +++ + D + +I L YLH
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 154
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 414 -SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 280 FLAEVKTIGSIHHQNLVRLIGFC-AEKSHNLLVY---EYMPNGSLDRWLFQRSDEFMLDW 335
F E + +++H +V + AE L Y EY+ +L + E +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTP 115
Query: 336 QQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQ 395
++ ++I D + L + H++ I+H D+KP NI++ KV DFG+++ I +
Sbjct: 116 KRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 396 VVTTMR--GTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
V T GT YL+PE + + D+YS G V+ E+L G F P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 236 KVMTDNF--RKMLGKGGFGSV---FE--GTQTDGTKVAVKRLEGIGEINKSFLA-----E 283
K + D + K LG G G V FE + ++ KR IG ++ A E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKII 342
++ + ++H ++++ F + + +V E M G L D+ + + L K
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR----LKEATCKLYF 259
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLIDQDQSQVVTT 399
+ + YLHE+ I+H D+KP+N+LL K+ DFG SK++ + + ++ T
Sbjct: 260 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 314
Query: 400 MRGTPGYLAPEWLSSIIT----EKVDIYSFGVVMLEILCGRKVF 439
+ GTP YLAPE L S+ T VD +S GV++ L G F
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTT 399
++I D + L + H++ I+H D+KP NI++ KV DFG+++ I + V T
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 400 MR--GTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
GT YL+PE + + D+YS G V+ E+L G F P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 35/284 (12%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSIHHQNLVR 297
NF L + G +++G + G + VK L + ++ F E + H N++
Sbjct: 13 NFLTKLNENHSGELWKG-RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 298 LIGFC--AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
++G C H L+ +MP GSL L + ++ F++D Q K LD+A+G+ +LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHT- 129
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI 415
I + +++++D + A+++ + D S P ++APE L
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKK 183
Query: 416 ITE----KVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLSDLVDKH 471
+ D++SF V++ E++ F D+ + I K A E +
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVTREVPF-------ADLSNMEIGMKVALEGLRPTIPPGI 236
Query: 472 SNDMQSNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLEGVTE 515
S V +MK+ C+ D AKRP M+V +LE + +
Sbjct: 237 S-------PHVSKLMKI---CMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 306 SHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDI 365
S +L+ EY G + E M+ ++I I +G+ YLH++ I+HLD+
Sbjct: 102 SEIILILEYAAGGEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYLHQN---NIVHLDL 157
Query: 366 KPQNILLDGNF---NAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS-SIITEKVD 421
KPQNILL + + K+ DFG+S+ I + + + GTP YLAPE L+ IT D
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEILNYDPITTATD 215
Query: 422 IYSFGVVMLEILCGRKVF 439
+++ G++ +L F
Sbjct: 216 MWNIGIIAYMLLTHTSPF 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 74
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 129
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + + S + G+ ++APE + + +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
+ D+Y+FG+V+ E++ G+ + ++ ++++
Sbjct: 190 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 127
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + + S + G+ ++APE + + +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHSNDMQ 476
+ D+Y+FG+V+ E++ G+ + ++ ++++ LS DL SN +
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-------RGYLSPDLSKVRSNCPK 240
Query: 477 SNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
+ M ++ A CL+ +RP ++ +E
Sbjct: 241 A-------MKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 340 KIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTT 399
++I D + L + H++ I+H D+KP NI++ KV DFG+++ I + V T
Sbjct: 137 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 400 MR--GTPGYLAPEWL-SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFK 456
GT YL+PE + + D+YS G V+ E+L G F P +S+
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-------VSVAY 246
Query: 457 KKAEEDKL 464
+ ED +
Sbjct: 247 QHVREDPI 254
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKR---LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFC 302
+GKG FG V++G +V + LE + + E+ + + R G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 303 AEKSHNLLVYEYMPNGS-LDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKIL 361
+ + ++ EY+ GS LD L + L+ I+ +I KGL YLH + + +
Sbjct: 87 LKSTKLWIIMEYLGGGSALD--LLKPGP---LEETYIATILREILKGLDYLHSERK---I 138
Query: 362 HLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL-SSIITEKV 420
H DIK N+LL + K+ADFG++ + Q + GTP ++APE + S K
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 421 DIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIF 455
DI+S G+ +E+ G +P D++ + +
Sbjct: 198 DIWSLGITAIELAKG-------EPPNSDLHPMRVL 225
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 132
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + + S + G+ ++APE + + +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHSNDMQ 476
+ D+Y+FG+V+ E++ G+ + ++ ++++ LS DL SN +
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-------RGYLSPDLSKVRSNCPK 245
Query: 477 SNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
+ M ++ A CL+ +RP ++ +E
Sbjct: 246 A-------MKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 99
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 154
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + + S + G+ ++APE + + +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
+ D+Y+FG+V+ E++ G+ + ++ ++++
Sbjct: 215 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 132
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + + S + G+ ++APE + + +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
+ D+Y+FG+V+ E++ G+ + ++ ++++
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 236 KVMTDNFR--KMLGKGGFGSVF-----EGTQTDGTKVAVKRLEGIGEINKS-----FLAE 283
KV +NF K+LG G +G VF G T G A+K L+ + K+ E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDT-GKLYAMKVLKKATIVQKAKTTEHTRTE 108
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
+ + I + + + + L L+ +Y+ G L L QR + + +
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYV 165
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRG 402
+I L +LH + I++ DIK +NILLD N + + DFGLSK D+++ G
Sbjct: 166 GEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG 222
Query: 403 TPGYLAPEWL---SSIITEKVDIYSFGVVMLEILCGRKVF 439
T Y+AP+ + S + VD +S GV+M E+L G F
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 155
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + + S + G+ ++APE + + +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLL 452
+ D+Y+FG+V+ E++ G+ + ++ ++++
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + + H N++ L ++ +L+ E + G L +L Q+ L ++ I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFI 121
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +KI H D+KP+NI LLD N + K+ DFGL+ I+
Sbjct: 122 KQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FK 176
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
+H LV L +S V EY+ G L +F + L + + +I+ L
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YLHE + I++ D+K N+LLD + K+ D+G+ K +T GTP Y+APE
Sbjct: 168 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPE 223
Query: 411 WL-SSIITEKVDIYSFGVVMLEILCGRKVFD 440
L VD ++ GV+M E++ GR FD
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + + H N++ L ++ +L+ E + G L +L Q+ L ++ I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFI 121
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +KI H D+KP+NI LLD N + K+ DFGL+ I+
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FK 176
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + + H N++ L ++ +L+ E + G L +L Q+ L ++ I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFI 121
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +KI H D+KP+NI LLD N + K+ DFGL+ I+
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FK 176
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + + H N++ L ++ +L+ E + G L +L Q+ L ++ I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFI 121
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +KI H D+KP+NI LLD N + K+ DFGL+ I+
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FK 176
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + + H N++ L ++ +L+ E + G L +L Q+ L ++ I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFI 121
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +KI H D+KP+NI LLD N + K+ DFGL+ I+
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FK 176
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + EI + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D KV DFGL+K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 227 PKRFSFEELKVMTDNF---RKMLGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEINKSFLA 282
PK+++ +TD++ +++LG G G V E + G K A+K L + +
Sbjct: 2 PKKYA------VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDH 55
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHN----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
+ G H +V ++ H L++ E M G L + +R D+ + ++
Sbjct: 56 HWQASGGPH---IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REA 111
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQ 395
+I+ DI + +LH I H D+KP+N+L + + K+ DFG +K Q+ Q
Sbjct: 112 AEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 168
Query: 396 VVTTMRGTPGYLAPEWLSSIITEK-VDIYSFGVVMLEILCGRKVF 439
T TP Y+APE L +K D++S GV+M +LCG F
Sbjct: 169 ---TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 105/251 (41%), Gaps = 55/251 (21%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEIN----KSFLAEVKTIGSIHHQ 293
+ + +G+G +G V + + ++ I +IN + EV+ + +HH
Sbjct: 29 HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM--------------------- 332
N+ RL ++ + LV E G L L D+
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 333 ------------LDWQQRKKIILDIAK----GLTYLHEDCRQKILHLDIKPQNILLDGN- 375
LD+ QR+K+I +I + L YLH Q I H DIKP+N L N
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNK 205
Query: 376 -FNAKVADFGLSK---LIDQDQSQVVTTMRGTPGYLAPEWLSSI---ITEKVDIYSFGVV 428
F K+ DFGLSK ++ + +TT GTP ++APE L++ K D +S GV+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 429 MLEILCGRKVF 439
+ +L G F
Sbjct: 266 LHLLLMGAVPF 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + + H N++ L ++ +L+ E + G L +L Q+ L ++ I
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFI 121
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +KI H D+KP+NI LLD N + K+ DFGL+ I+
Sbjct: 122 KQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FK 176
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 91
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 145
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + T+ GTP YLAPE LS
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGY 201
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + T+ GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K +G G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D KVADFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLA-------EVKTIGSIHHQNLVRL 298
LG G FG V + +V V + IN + E+ + +HH L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKF-----INTPYPLDKYTVKNEISIMNQLHHPKLINL 113
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQR--SDEFMLDWQQRKKIILDIAKGLTYLHEDC 356
+K +L+ E++ G L F R ++++ + + + +GL ++HE
Sbjct: 114 HDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-- 167
Query: 357 RQKILHLDIKPQNILLDGN--FNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS- 413
I+HLDIKP+NI+ + + K+ DFGL+ ++ D+ VTT T + APE +
Sbjct: 168 -HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDR 224
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ GV+ +L G F
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 227 PKRFSFEELKVMTDNF---RKMLGKGGFGSVFEG-TQTDGTKVAVKRLEGIGEINKSFLA 282
PK+++ +TD++ +++LG G G V E + G K A+K L + +
Sbjct: 21 PKKYA------VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDH 74
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHN----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
+ G H +V ++ H L++ E M G L + +R D+ + ++
Sbjct: 75 HWQASGGPH---IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REA 130
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQ 395
+I+ DI + +LH I H D+KP+N+L + + K+ DFG +K Q+ Q
Sbjct: 131 AEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187
Query: 396 VVTTMRGTPGYLAPEWLSSIITEK-VDIYSFGVVMLEILCGRKVF 439
T TP Y+APE L +K D++S GV+M +LCG F
Sbjct: 188 ---TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 228 KRFSFEELKVMTDNFRKMLGKGGFGSVFEG--------TQTDGTKVAVKRLEGIGEINKS 279
K+ +E+ + F + LG+ FG V++G QT + + + G + +
Sbjct: 16 KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE 75
Query: 280 FLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD---------- 329
F E + H N+V L+G + +++ Y +G L +L RS
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 330 ---EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLS 386
+ L+ ++ IA G+ YL ++H D+ +N+L+ N K++D GL
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 387 K-LIDQDQSQVVTTMRGTPGYLAPEWLSSIITEKV----DIYSFGVVMLEIL 433
+ + D +++ ++APE +I+ K DI+S+GVV+ E+
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPE---AIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 119
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 120 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 174
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 119
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 120 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 174
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLSS 414
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q + GT Y++PE L+
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 415 IITEK-VDIYSFGVVMLEILCGRKVF 439
K D+++ G ++ +++ G F
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 92
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 147
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + S + G+ ++APE + + +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHSNDMQ 476
+ D+Y+FG+V+ E++ G+ + ++ ++++ LS DL SN +
Sbjct: 208 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-------RGYLSPDLSKVRSNCPK 260
Query: 477 SNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
+ M ++ A CL+ +RP ++ +E
Sbjct: 261 A-------MKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 127
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + S + G+ ++APE + + +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHSNDMQ 476
+ D+Y+FG+V+ E++ G+ + ++ ++++ LS DL SN +
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-------RGYLSPDLSKVRSNCPK 240
Query: 477 SNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
+ M ++ A CL+ +RP ++ +E
Sbjct: 241 A-------MKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ K +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 155
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + S + G+ ++APE + + +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHSNDMQ 476
+ D+Y+FG+V+ E++ G+ + ++ ++++ LS DL SN +
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-------RGYLSPDLSKVRSNCPK 268
Query: 477 SNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
+ M ++ A CL+ +RP ++ +E
Sbjct: 269 A-------MKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 344 DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGT 403
D L +LH Q ++HLD+KP NI L K+ DFGL L++ + G
Sbjct: 165 DTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGD 219
Query: 404 PGYLAPEWLSSIITEKVDIYSFGVVMLEILC 434
P Y+APE L D++S G+ +LE+ C
Sbjct: 220 PRYMAPELLQGSYGTAADVFSLGLTILEVAC 250
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEI---NKSFLAEVKTIGSIHHQNLVRL--- 298
+G G +G V + G +VA+K++ ++ K L E+K + H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 299 ----IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+ + KS VY + D S + L + + + + +GL Y+H
Sbjct: 123 LRPTVPYGEFKS----VYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHS 177
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLI---DQDQSQVVTTMRGTPGYLAPEW 411
+++H D+KP N+L++ N K+ DFG+++ + + +T T Y APE
Sbjct: 178 ---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 412 LSSI--ITEKVDIYSFGVVMLEILCGRKVF 439
+ S+ T+ +D++S G + E+L R++F
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ + Q K I
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
LD G+ YLH ++I H D+KP+NI LLD N K+ DFG++ I+
Sbjct: 125 LD---GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FK 176
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + EI + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D +V DFGL+K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 31/275 (11%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINK---SFLAEVKTIGSIHHQNLVRLIGFC 302
+G G FG+V++G VAVK L + +F EV + H N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 303 AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILH 362
+ +V ++ SL L +F + + I A+G+ YLH + I+H
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSIIH 127
Query: 363 LDIKPQNILLDGNFNAKVADFGLSKLIDQ-DQSQVVTTMRGTPGYLAPEWL----SSIIT 417
D+K NI L + K+ DFGL+ + + S + G+ ++APE + + +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 418 EKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHSNDMQ 476
+ D+Y+FG+V+ E++ G+ + ++ ++++ LS DL SN +
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG-------RGYLSPDLSKVRSNCPK 240
Query: 477 SNGEEVVNMMKVAAWCLESDFAKRPSMSMVVRVLE 511
+ M ++ A CL+ +RP ++ +E
Sbjct: 241 A-------MKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ + Q K I
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
LD G+ YLH ++I H D+KP+NI LLD N K+ DFG++ I+
Sbjct: 118 LD---GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FK 169
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ L ++ + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEATEFL 120
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
I G+ YLH +I H D+KP+NI LLD N K+ DFGL+ ID
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FK 175
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 150
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q + GT Y++PE L+
Sbjct: 151 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGEI---NKSFLAEVKTIGSIHHQNLVRL--- 298
+G G +G V + G +VA+K++ ++ K L E+K + H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 299 ----IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
+ + KS VY + D S + L + + + + +GL Y+H
Sbjct: 122 LRPTVPYGEFKS----VYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHS 176
Query: 355 DCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLI---DQDQSQVVTTMRGTPGYLAPEW 411
+++H D+KP N+L++ N K+ DFG+++ + + +T T Y APE
Sbjct: 177 ---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 412 LSSI--ITEKVDIYSFGVVMLEILCGRKVF 439
+ S+ T+ +D++S G + E+L R++F
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLSS 414
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 415 IITEK-VDIYSFGVVMLEILCGRKVF 439
K D+++ G ++ +++ G F
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 224 PGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKS 279
P P++ E+ K F K+LG+G F +V + ++ A+K LE I E
Sbjct: 1 PPQPRKKRPEDFK-----FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP 55
Query: 280 FLAEVKTIGS-IHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
++ + + S + H V+L + Y NG L +++ + D
Sbjct: 56 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCT 112
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-V 397
+ +I L YLH + I+H D+KP+NILL+ + + ++ DFG +K++ + Q
Sbjct: 113 RFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 398 TTMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
GT Y++PE L+ + D+++ G ++ +++ G F
Sbjct: 170 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQNLVRLIGF 301
+G+G FG VF+ + G KVA+K++ E + L E+K + + H+N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 302 CAEKSHNL--------LVYEYMPN---GSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
C K+ LV+++ + G L L + F L + K+++ + GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLS--EIKRVMQMLLNGLY 139
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK---LIDQDQSQVVTTMRGTPGYL 407
Y+H R KILH D+K N+L+ + K+ADFGL++ L Q T Y
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 408 APEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
PE L +D++ G +M E+ R + E+ + L+S
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 243
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 283 EVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKII 342
EV + I H N++ L K+ +L+ E + G L +L ++ + Q K I
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 343 LDIAKGLTYLHEDCRQKILHLDIKPQNI-LLDGNF---NAKVADFGLSKLIDQDQSQVVT 398
LD G+ YLH ++I H D+KP+NI LLD N K+ DFG++ I+
Sbjct: 139 LD---GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FK 190
Query: 399 TMRGTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVF 439
+ GTP ++APE ++ + + D++S GV+ +L G F
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQNLVRLIGF 301
+G+G FG VF+ + G KVA+K++ E + L E+K + + H+N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 302 CAEKSHNL--------LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
C K+ LV+++ + L L +F L + K+++ + GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTL--SEIKRVMQMLLNGLYYIH 142
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK---LIDQDQSQVVTTMRGTPGYLAPE 410
R KILH D+K N+L+ + K+ADFGL++ L Q T Y PE
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 411 WL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
L +D++ G +M E+ R + E+ + L+S
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 243
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 240 DNFRKM--LGKGGFGSVFEGTQT-DGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQ 293
D +R++ LG+G +G V++ T VA+KR+ E + + + EV + + H+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 294 NLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
N++ L L++EY N L +++ + D M + K + + G+ + H
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSM---RVIKSFLYQLINGVNFCH 149
Query: 354 EDCRQKILHLDIKPQNILLDGNFNA-----KVADFGLSKL----IDQDQSQVVTTMRGTP 404
++ LH D+KPQN+LL + + K+ DFGL++ I Q +++T
Sbjct: 150 S---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW---- 202
Query: 405 GYLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
Y PE L S + VDI+S + E+L +F
Sbjct: 203 -YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQNLVRLIGF 301
+G+G FG VF+ + G KVA+K++ E + L E+K + + H+N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 302 CAEKSHNL--------LVYEYMPN---GSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
C K+ LV+++ + G L L + F L + K+++ + GL
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTL--SEIKRVMQMLLNGLY 138
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK---LIDQDQSQVVTTMRGTPGYL 407
Y+H R KILH D+K N+L+ + K+ADFGL++ L Q T Y
Sbjct: 139 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 408 APEWL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
PE L +D++ G +M E+ R + E+ + L+S
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 242
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV KVAVK+L + + +++ E++ + + H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 94
Query: 301 -FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
F S Y+ + L L + + ++ + +GL Y+H
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS---AG 151
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----WLSSI 415
I+H D+KP N+ ++ + ++ DFGL++ D++ + V T Y APE W+
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR----WYRAPEIMLNWMH-- 205
Query: 416 ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ VDI+S G +M E+L G+ +F S
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 232 FEELKVMTDNFRKMLGKGGFGSVFEG--------TQTDGTKVAVKRLEGIGEINKSFLAE 283
+E+ + F + LG+ FG V++G QT + + + G + + F E
Sbjct: 3 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 284 VKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSD-------------E 330
+ H N+V L+G + +++ Y +G L +L RS +
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 331 FMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK-LI 389
L+ ++ IA G+ YL ++H D+ +N+L+ N K++D GL + +
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY 179
Query: 390 DQDQSQVVTTMRGTPGYLAPEWLSSIITEKV----DIYSFGVVMLEIL 433
D +++ ++APE +I+ K DI+S+GVV+ E+
Sbjct: 180 AADYYKLLGNSLLPIRWMAPE---AIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 146
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q + GT Y++PE L+
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVKRLEGIGE---INKSFLAEVKTIGSIHHQNLVRLIGF 301
+G+G FG VF+ + G KVA+K++ E + L E+K + + H+N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 302 CAEKSHNL--------LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
C K+ LV+++ + L L +F L + K+++ + GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTL--SEIKRVMQMLLNGLYYIH 142
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSK---LIDQDQSQVVTTMRGTPGYLAPE 410
R KILH D+K N+L+ + K+ADFGL++ L Q T Y PE
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 411 WL--SSIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLS 453
L +D++ G +M E+ R + E+ + L+S
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 243
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 147
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
+H LV L +S V EY+ G L +F + L + + +I+ L
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YLHE + I++ D+K N+LLD + K+ D+G+ K + GTP Y+APE
Sbjct: 136 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPE 191
Query: 411 WL-SSIITEKVDIYSFGVVMLEILCGRKVFD 440
L VD ++ GV+M E++ GR FD
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 233 EELKVMTDNFR--KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKS-----FLAEVK 285
+E+++ ++F K++G+G FG V + ++ ++ E+ K F E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+ + Q + L +++H LV +Y G L L + D+ D + I ++
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIGEM 184
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
+ +H+ +H DIKP N+LLD N + ++ADFG ++ D + + GTP
Sbjct: 185 VLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD 241
Query: 406 YLAPEWLSSI------ITEKVDIYSFGVVMLEILCGRKVF 439
Y++PE L ++ + D +S GV M E+L G F
Sbjct: 242 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 98
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXE--PHARFYAAQIVLTFEYLHS--- 152
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 208
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 147
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG- 127
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 128 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 147
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 150
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 151 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 98
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 152
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 208
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG- 125
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 126 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHG- 126
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 127 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 131
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 132 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 152
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 153 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 233 EELKVMTDNFR--KMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKS-----FLAEVK 285
+E+++ ++F K++G+G FG V + ++ ++ E+ K F E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 286 TIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+ + Q + L +++H LV +Y G L L + D+ D + I ++
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIGEM 200
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
+ +H+ +H DIKP N+LLD N + ++ADFG ++ D + + GTP
Sbjct: 201 VLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD 257
Query: 406 YLAPEWLSSI------ITEKVDIYSFGVVMLEILCGRKVF 439
Y++PE L ++ + D +S GV M E+L G F
Sbjct: 258 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D KV DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
+H LV L +S V EY+ G L +F + L + + +I+ L
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YLHE + I++ D+K N+LLD + K+ D+G+ K + GTP Y+APE
Sbjct: 125 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPE 180
Query: 411 WL-SSIITEKVDIYSFGVVMLEILCGRKVFD 440
L VD ++ GV+M E++ GR FD
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLT 350
+H LV L +S V EY+ G L +F + L + + +I+ L
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 351 YLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE 410
YLHE + I++ D+K N+LLD + K+ D+G+ K + GTP Y+APE
Sbjct: 121 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPE 176
Query: 411 WL-SSIITEKVDIYSFGVVMLEILCGRKVFD 440
L VD ++ GV+M E++ GR FD
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 295 LVRLIGFCAEKSHNLLVYEYM-PNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
++RL+ + +L+ E M P L ++ +R L + + + + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCH 131
Query: 354 EDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 132 -NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 185
Query: 413 S--SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 149
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F +V + ++ A+K LE I E ++ + + S + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 146
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D KV DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 240 DNFRKM--LGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIH 291
D F ++ LG G FG V + G A+K L+ + +I + L E + +++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRIQQAVN 100
Query: 292 HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY 351
LV+L + S+ +V EY P G + L +R F + I Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEY 157
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE- 410
LH +++ D+KP+N+L+D KVADFG +K + + GTP YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 411 WLSSIITEKVDIYSFGVVMLEILCGRKVFDRSQP 444
LS + VD ++ GV++ E+ G F QP
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D KV DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV KVAVK+L + + +++ E++ + + H+N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 86
Query: 301 -FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
F S Y+ + L L + + ++ + +GL Y+H
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS---AG 143
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----WLSSI 415
I+H D+KP N+ ++ + ++ DFGL++ D++ + V T Y APE W+
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR----WYRAPEIMLNWMH-- 197
Query: 416 ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ VDI+S G +M E+L G+ +F S
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 126
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+P G + L +R F + I YLH
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 180
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 236
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 25/256 (9%)
Query: 210 NGADEIEEDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVF--EGTQTD---GTK 264
G EE + + + + +K+ NF +LGKG FG V E TD K
Sbjct: 313 QGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVK 372
Query: 265 VAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRW 323
+ K + + + + E + + + + C + L V EY+ G L +
Sbjct: 373 ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MY 431
Query: 324 LFQRSDEFMLDWQQRKKIIL--DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVA 381
Q+ F ++ + +IA GL +L + I++ D+K N++LD + K+A
Sbjct: 432 HIQQVGRF----KEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIA 484
Query: 382 DFGLSKLIDQDQSQVVTTMR--GTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKV 438
DFG+ K ++ VTT GTP Y+APE ++ + VD ++FGV++ E+L G+
Sbjct: 485 DFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
Query: 439 FDRSQPEEEDMYLLSI 454
F+ E+ED SI
Sbjct: 542 FEG---EDEDELFQSI 554
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLE------GIGEINKSFLAEVKTIGSIHHQNLV 296
+++GKG F V + G + AVK ++ G + E + H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDE-FMLDWQQRKKIILDIAKGLTYLHED 355
L+ + +V+E+M L + +R+D F+ + I + L Y H++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 356 CRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMR-GTPGYLAPEW 411
I+H D+KP+N+LL N+ K+ DFG++ I +S +V R GTP ++APE
Sbjct: 150 ---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFMAPEV 204
Query: 412 LS-SIITEKVDIYSFGVVMLEILCG 435
+ + VD++ GV++ +L G
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 246 LGKGGFGSVFEGTQTD-GTKVAVKRL----EGIGEINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G +GSV KVAVK+L + + +++ E++ + + H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 94
Query: 301 -FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQK 359
F S Y+ + L L + + ++ + +GL Y+H
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS---AG 151
Query: 360 ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE----WLSSI 415
I+H D+KP N+ ++ + ++ DFGL++ D++ + V T Y APE W+
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR----WYRAPEIMLNWMH-- 205
Query: 416 ITEKVDIYSFGVVMLEILCGRKVFDRS 442
+ VDI+S G +M E+L G+ +F S
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 243 RKMLGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIG-SIHHQNLVRLIGF 301
+ +LG G G++ D VAVKR+ + E EV+ + S H N++R F
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRI--LPECFSFADREVQLLRESDEHPNVIRY--F 84
Query: 302 CAEKSHNLLVYEYMP----NGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
C EK ++Y+ +L ++ Q+ +F + ++ GL +LH
Sbjct: 85 CTEKDRQ---FQYIAIELCAATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS--- 136
Query: 358 QKILHLDIKPQNILLD-----GNFNAKVADFGLSK--LIDQDQSQVVTTMRGTPGYLAPE 410
I+H D+KP NIL+ G A ++DFGL K + + + + GT G++APE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 411 WLSSIITEK----VDIYSFGVVMLEILC-GRKVFDRSQPEEEDMYL 451
LS E VDI+S G V ++ G F +S + ++ L
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL 242
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 246 LGKGGFGSVFE--GTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQN------LVR 297
LG+G FG V E + G VAVK ++ + ++ +E++ + ++ + V+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDC 356
++ + H +V+E + + D F + + F+ +K+ I K + +LH +
Sbjct: 82 MLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQICKSVNFLHSN- 137
Query: 357 RQKILHLDIKPQNILLDG-------------------NFNAKVADFGLSKLIDQDQSQVV 397
K+ H D+KP+NIL N + KV DFG + D+ S +V
Sbjct: 138 --KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLV 195
Query: 398 TTMRGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEE 447
+T Y APE + ++ ++ D++S G +++E G VF +E
Sbjct: 196 STRH----YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 246 LGKGGFGSVFEGTQTDGTK---VAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIG-F 301
+G+G +G V++ + DG A+K++EG G I+ S E+ + + H N++ L F
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVF 87
Query: 302 CAEKSHNL-LVYEYMPNGSLDRWLFQRSDE-----FMLDWQQRKKIILDIAKGLTYLHED 355
+ + L+++Y + F R+ + L K ++ I G+ YLH +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 356 CRQKILHLDIKPQNILLDG----NFNAKVADFGLSKLIDQ------DQSQVVTTMRGTPG 405
+LH D+KP NIL+ G K+AD G ++L + D VV T
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF----W 200
Query: 406 YLAPEWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
Y APE L + T+ +DI++ G + E+L +F
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 233 EELKVMTDNFR--KMLGKGGFGSVFEGTQTDGTKVAVKRL----EGIGEINKSFLAEVKT 286
+++++ ++F K++G+G FG V + KV ++ E + + E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 287 IGSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDI 345
+ + + + + +NL LV +Y G L L + D L + + + ++
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR--LPEEMARFYLAEM 184
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
+ +H+ +H DIKP NIL+D N + ++ADFG + +D + + GTP
Sbjct: 185 VIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD 241
Query: 406 YLAPEWLSSIITEK------VDIYSFGVVMLEILCGRKVF 439
Y++PE L ++ K D +S GV M E+L G F
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 126
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 180
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + T+ GTP YLAPE LS
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPEIILSKGY 236
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 24/240 (10%)
Query: 218 DYLDQVPGLPKRFS----FEELKVMTDNFR--KMLGKGGFGSVFE-GTQTDGTKVAVKRL 270
DYLD + RF E V + FR ++LGKGGFG V + G A K+L
Sbjct: 160 DYLDSI--YFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKL 217
Query: 271 EGIGEINKS----FLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQ 326
E + L E + + ++ + +V L K LV M G L ++
Sbjct: 218 EKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 277
Query: 327 RSDEFMLDWQQRKKIIL--DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFG 384
+ + + + +I GL LH R++I++ D+KP+NILLD + + +++D G
Sbjct: 278 MGQA---GFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLG 331
Query: 385 LSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
L+ + + Q + GT GY+APE + + T D ++ G ++ E++ G+ F + +
Sbjct: 332 LA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 25/233 (10%)
Query: 233 EELKVMTDNFRKMLGKGGFGSVF--EGTQTD---GTKVAVKRLEGIGEINKSFLAEVKTI 287
+ +K+ NF +LGKG FG V E TD K+ K + + + + E + +
Sbjct: 15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 288 GSIHHQNLVRLIGFCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIIL--D 344
+ + C + L V EY+ G L + Q+ F ++ + +
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRF----KEPHAVFYAAE 129
Query: 345 IAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR--G 402
IA GL +L + I++ D+K N++LD + K+ADFG+ K ++ VTT G
Sbjct: 130 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCG 183
Query: 403 TPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCGRKVFDRSQPEEEDMYLLSI 454
TP Y+APE ++ + VD ++FGV++ E+L G+ F + E+ED SI
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF---EGEDEDELFQSI 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 241 NFRKMLGKGGFGSVFEGTQTDGTK-VAVKRLEG---IGEINKSFLAEVKTIGS-IHHQNL 295
F K+LG+G F + + ++ A+K LE I E ++ + + S + H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 296 VRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHED 355
V+L + Y NG L +++ + D + +I L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 147
Query: 356 CRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQV-VTTMRGTPGYLAPEWLS- 413
+ I+H D+KP+NILL+ + + ++ DFG +K++ + Q GT Y++PE L+
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 414 SIITEKVDIYSFGVVMLEILCGRKVF 439
+ D+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D KV DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D KV DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY P G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D KV DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 24/240 (10%)
Query: 218 DYLDQVPGLPKRFS----FEELKVMTDNFR--KMLGKGGFGSVFE-GTQTDGTKVAVKRL 270
DYLD + RF E V + FR ++LGKGGFG V + G A K+L
Sbjct: 160 DYLDSI--YFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKL 217
Query: 271 EGIGEINKS----FLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQ 326
E + L E + + ++ + +V L K LV M G L ++
Sbjct: 218 EKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 277
Query: 327 RSDEFMLDWQQRKKIIL--DIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFG 384
+ + + + +I GL LH R++I++ D+KP+NILLD + + +++D G
Sbjct: 278 MGQA---GFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLG 331
Query: 385 LSKLIDQDQSQVVTTMRGTPGYLAPEWLSS-IITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
L+ + + Q + GT GY+APE + + T D ++ G ++ E++ G+ F + +
Sbjct: 332 LA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 246 LGKGGFGSVFEGTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAE- 304
+GKG +G V+ G G VAVK E + E+ + H N+ +GF A
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI---LGFIASD 71
Query: 305 -KSHN-----LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDC-- 356
S N L+ Y +GSL +L +++ E L ++ + A GL +LH +
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFG 127
Query: 357 ---RQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ--DQSQVVTTMR-GTPGYLAPE 410
+ I H D K +N+L+ N +AD GL+ + Q D + R GT Y+APE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 411 WLSSIIT-------EKVDIYSFGVVMLEI 432
L I + DI++FG+V+ EI
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 17/248 (6%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGI--GEINKSFLAEVK-TIGSIHHQNLVRLIGF 301
LG+G +G V + G +AVKR+ + K L ++ ++ ++ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 302 CAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+ + E M + SLD++ Q D+ + KI + I K L +LH + +
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 131
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITE-- 418
+H D+KP N+L++ K+ DFG+S + D ++ + G Y+APE ++ + +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYMAPERINPELNQKG 189
Query: 419 ---KVDIYSFGVVMLEILCGRKVFDR-SQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHSN 473
K DI+S G+ M+E+ R +D P ++ ++ + DK S + VD S
Sbjct: 190 YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ 249
Query: 474 DMQSNGEE 481
++ N +E
Sbjct: 250 CLKKNSKE 257
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 146
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 147 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 201
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 147
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 148 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 202
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 146
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 147 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 201
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 147
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 148 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 202
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 19/249 (7%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEGI--GEINKSFLAEVK-TIGSIHHQNLVRLIGF 301
LG+G +G V + G +AVKR+ + K L ++ ++ ++ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 302 CAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQKI 360
+ + E M + SLD++ Q D+ + KI + I K L +LH + +
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 175
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSK-LIDQDQSQVVTTMRGTPGYLAPEWLSSIITE- 418
+H D+KP N+L++ K+ DFG+S L+D S T G Y+APE ++ + +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVD---SVAKTIDAGCKPYMAPERINPELNQK 232
Query: 419 ----KVDIYSFGVVMLEILCGRKVFDR-SQPEEEDMYLLSIFKKKAEEDKLS-DLVDKHS 472
K DI+S G+ M+E+ R +D P ++ ++ + DK S + VD S
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 292
Query: 473 NDMQSNGEE 481
++ N +E
Sbjct: 293 QCLKKNSKE 301
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 147
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 148 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 202
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 159
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 160 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 160
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 218
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 219 LGVIMYILLCGYPPF 233
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 160
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 161 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 159
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 160 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 132
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 133 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 187
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 110 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 166
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 167 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 221
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 253
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 160
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 161 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 174
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 175 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 229
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 160
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 161 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 159
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 160 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 159
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 160 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 152
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 210
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 211 LGVIMYILLCGYPPF 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 132
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 133 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 187
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 132
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 133 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 187
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 145
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 203
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 204 LGVIMYILLCGYPPF 218
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 150
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 208
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 209 LGVIMYILLCGYPPF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 203 LGVIMYILLCGYPPF 217
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 160
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 161 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 151
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 209
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 210 LGVIMYILLCGYPPF 224
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 131
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 132 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 186
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 174
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 175 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 229
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 123 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 179
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 180 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 234
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 266
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 196
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 254
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 255 LGVIMYILLCGYPPF 269
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 74 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 130
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 131 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 185
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 42/228 (18%)
Query: 242 FRKMLGKGGFGSVFEG-TQTDGTKVAVKRLEGIGE--IN-KSFLAEVKTIGSIHHQNLVR 297
R ++G G +G V E + + VA+K++ + E I+ K L E+ + ++H ++V+
Sbjct: 57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVK 116
Query: 298 LIGFC----AEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLH 353
++ EK L V + + + LF R+ ++ + K ++ ++ G+ Y+H
Sbjct: 117 VLDIVIPKDVEKFDELYVVLEIADSDFKK-LF-RTPVYLTELHI-KTLLYNLLVGVKYVH 173
Query: 354 EDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLID--------------QDQSQVVT- 398
ILH D+KP N L++ + + KV DFGL++ +D +D +VT
Sbjct: 174 S---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 399 -----TMRGTPGYLAPEW--------LSSIITEKVDIYSFGVVMLEIL 433
R G++ W L TE +D++S G + E+L
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 205 LGVIMYILLCGYPPF 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 205 LGVIMYILLCGYPPF 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 249 LGVIMYILLCGYPPF 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 127
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 128 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 182
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 98 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 154
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 155 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 209
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 241
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCH- 127
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+C +LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 128 NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 182
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 48/243 (19%)
Query: 232 FEELKVMTDN----FRKMLGKGGFGSV--FEGTQTDGTKVAVKRLEGIGEINKSFLAEVK 285
F+ V+ DN F + LG+GGF V EG DG A+KR+ + ++ E +
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLH-DGHFYALKRILCHEQQDRE---EAQ 74
Query: 286 TIGSIH----HQNLVRLIGFC----AEKSHNLLVYEYMPNGSL--------DRWLFQRSD 329
+H H N++RL+ +C K L+ + G+L D+ F D
Sbjct: 75 READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 134
Query: 330 EFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGL--SK 387
+ + W ++L I +GL +H + H D+KP NILL + D G
Sbjct: 135 QIL--W-----LLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
Query: 388 LIDQDQSQVVTTM------RGTPGYLAPEWLS----SIITEKVDIYSFGVVMLEILCGRK 437
I + S+ T+ R T Y APE S +I E+ D++S G V+ ++ G
Sbjct: 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
Query: 438 VFD 440
+D
Sbjct: 245 PYD 247
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 39/231 (16%)
Query: 246 LGKGGFGSVFE--GTQTDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQN------LVR 297
LG+G FG V E + G VAVK ++ + ++ +E++ + ++ + V+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDC 356
++ + H +V+E + + D F + + F+ +K+ I K + +LH +
Sbjct: 82 MLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQICKSVNFLHSN- 137
Query: 357 RQKILHLDIKPQNILLDG-------------------NFNAKVADFGLSKLIDQDQSQVV 397
K+ H D+KP+NIL N + KV DFG + D+ S +V
Sbjct: 138 --KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLV 195
Query: 398 TTMRGTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRSQPEEE 447
Y APE + ++ ++ D++S G +++E G VF +E
Sbjct: 196 XXRH----YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 92
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 146
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 202
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 100
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 154
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 210
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 211 NKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEP--HARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 245 MLGKGGFGSVFEGTQ-TDGTKVAVK-----RLEGIGEINKSFLAEVKTI----GSIHHQN 294
+LG GGFGSV+ G + +D VA+K R+ GE+ ++ + S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 295 LVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHE 354
++RL+ + +L+ E P D + F ++ L + + + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHN 128
Query: 355 DCRQKILHLDIKPQNILLDGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLS 413
+LH DIK +NIL+D N K+ DFG L+ + V T GT Y PEW+
Sbjct: 129 ---XGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 182
Query: 414 --SIITEKVDIYSFGVVMLEILCGRKVFDRSQ 443
++S G+++ +++CG F+ +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 126
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEP--HARFYAAQIVLTFEYLHS--- 180
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 236
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 30/214 (14%)
Query: 244 KMLGKGGFGSVFE-----GTQTDGTKVAVKRLEG--IGEINKSFLAEVKTIGSIHHQNLV 296
K LG+G F + Q K+ KR+E EI L E H N+V
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE-------GHPNIV 69
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQR-SDEFMLDWQQRKKIILDIAKGLTYLHED 355
+L ++ H LV E + G L F+R + + I+ + ++++H+
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD- 124
Query: 356 CRQKILHLDIKPQNILL---DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
++H D+KP+N+L + N K+ DFG ++L D +Q + T T Y APE L
Sbjct: 125 --VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPCFTLHYAAPELL 181
Query: 413 S-SIITEKVDIYSFGVVMLEILCGRKVF---DRS 442
+ + E D++S GV++ +L G+ F DRS
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEIN---KSFLAEVKTIGSIHHQNLVRLI 299
K +G G G V T G VAVK+L + K E+ + ++H+N++ L+
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 300 G-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
F +K+ Y+ +D L Q LD ++ ++ + G+ +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQ-VIHMELDHERMSYLLYQMLCGIKHLHS---A 143
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI-IT 417
I+H D+KP NI++ + K+ DFGL++ + ++T T Y APE + +
Sbjct: 144 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 418 EKVDIYSFGVVMLEILCGRKVF 439
E VDI+S G +M E++ G +F
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIF 223
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 106
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 160
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 56/264 (21%)
Query: 214 EIEEDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQT----DGTKVAVKR 269
+IE+ Y + VP L F E+ +G+G F SV+ T K+A+K
Sbjct: 8 DIEKLY-EAVPQLSNVFKIED----------KIGEGTFSSVYLATAQLQVGPEEKIALKH 56
Query: 270 LEGIGEINKSFLAEVKTIGSIHHQNLVRLIGFCAEKS-HNLLVYEYMPNGSLDRWLFQRS 328
L + AE++ + Q+ V + +C K+ H ++ Y+ + S L
Sbjct: 57 LIPTSHPIR-IAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-- 113
Query: 329 DEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA-KVADFGLSK 387
L +Q+ ++ +L++ K L +H+ I+H D+KP N L + + DFGL++
Sbjct: 114 ----LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
Query: 388 --------LIDQDQS-------------------QVVTTMRGTPGYLAPEWLSSII--TE 418
L+ QS Q V GTPG+ APE L+ T
Sbjct: 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTT 226
Query: 419 KVDIYSFGVVMLEILCGRKVFDRS 442
+D++S GV+ L +L GR F ++
Sbjct: 227 AIDMWSAGVIFLSLLSGRYPFYKA 250
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 246 LGKGGFGSVFEGTQTDGTKV-AVKRLEGIG----EINKSFLAEVKTIGSIHHQNLVRLIG 300
+G G FG+V+ ++V A+K++ G E + + EV+ + + H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 301 FCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA-------KGLTYL 352
C + H LV EY + D +L+ ++ ++IA +GL YL
Sbjct: 83 -CYLREHTAWLVMEYCLGSASD----------LLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H ++H D+K NILL K+ DFG + ++ V GTP ++APE +
Sbjct: 132 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 183
Query: 413 SSI----ITEKVDIYSFGVVMLEI 432
++ KVD++S G+ +E+
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 36/204 (17%)
Query: 246 LGKGGFGSVFEGTQTDGTKV-AVKRLEGIGEIN----KSFLAEVKTIGSIHHQNLVRLIG 300
+G G FG+V+ ++V A+K++ G+ + + + EV+ + + H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 301 FCAEKSHNL-LVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIA-------KGLTYL 352
C + H LV EY + D +L+ ++ ++IA +GL YL
Sbjct: 122 -CYLREHTAWLVMEYCLGSASD----------LLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWL 412
H ++H D+K NILL K+ DFG + ++ V GTP ++APE +
Sbjct: 171 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 222
Query: 413 SSI----ITEKVDIYSFGVVMLEI 432
++ KVD++S G+ +E+
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 246 LGKGGFGSVFEGT-QTDGTKVAVK--RLEGIGEINKSFLAEVKTIGSIHH-QNLVRLIGF 301
+G G G V++ + G +AVK R G E NK L ++ + H +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 302 CAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKIL 361
+ + E M G+ L +R + + + K+ + I K L YL E + ++
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKE--KHGVI 147
Query: 362 HLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-- 419
H D+KP NILLD K+ DFG+S + D+++ + G Y+APE + K
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTKPD 205
Query: 420 ----VDIYSFGVVMLEILCGR 436
D++S G+ ++E+ G+
Sbjct: 206 YDIRADVWSLGISLVELATGQ 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 244 KMLGKGGFGSVFEGTQ-TDGTKVAVKRLEGIGEINKSFLAEVKTIGSIHHQNLVRLIGF- 301
+M G+G FG+V G + + G VA+K++ L ++ + +HH N+V+L +
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYF 88
Query: 302 --CAEKSHNLL----VYEYMPNGSLDR-----WLFQRSDEFMLDWQQRKKIILDIAKGLT 350
E+ + V EY+P+ +L R + Q + +L K + + + +
Sbjct: 89 YTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILI----KVFLFQLIRSIG 143
Query: 351 YLHEDCRQKILHLDIKPQNILL-DGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAP 409
LH + H DIKP N+L+ + + K+ DFG +K + + V + Y AP
Sbjct: 144 CLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC--SRYYRAP 200
Query: 410 EWL--SSIITEKVDIYSFGVVMLEILCGRKVF 439
E + + T VDI+S G + E++ G +F
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 242 FRKMLGKGGFGSVFEGT--------QTDGTKVAVKRLEGIGE-INKSFLAEVKTIGSIHH 292
F + LG+G F +F+G Q T+V +K L+ ++SF + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTY- 351
++LV G C N+LV E++ GSLD +L + + + W+ L++AK L +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK------LEVAKQLAWA 125
Query: 352 LHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT---TMRGTPGYLA 408
+H ++H ++ +NILL + K + KL D S V ++ ++
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 409 PEWLSSI--ITEKVDIYSFGVVMLEILCG 435
PE + + + D +SFG + EI G
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 242 FRKMLGKGGFGSVFEGT--------QTDGTKVAVKRLEGIGE-INKSFLAEVKTIGSIHH 292
F + LG+G F +F+G Q T+V +K L+ ++SF + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 293 QNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYL 352
++LV G C N+LV E++ GSLD +L + + + W + ++ +A + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 353 HEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT---TMRGTPGYLAP 409
E+ ++H ++ +NILL + K + KL D S V ++ ++ P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 410 EWLSSI--ITEKVDIYSFGVVMLEILCG 435
E + + + D +SFG + EI G
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 37/234 (15%)
Query: 234 ELKVMTDNFRKMLGKGGFGSVFEGTQT-DGTKVAVKRL-EGIGEINKSFLAEVKTIGSIH 291
EL + R++L +GGF V+E G + A+KRL E N++ + EV + +
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 292 -HQNLVRLIGFCAEKS----------HNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKK 340
H N+V+ FC+ S L+ + G L +L + L K
Sbjct: 84 GHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 341 IILDIAKGLTYLHEDCRQK--ILHLDIKPQNILLDGNFNAKVADFGLSKLIDQ------- 391
I + + ++H RQK I+H D+K +N+LL K+ DFG + I
Sbjct: 141 IFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197
Query: 392 DQSQVVT----TMRGTPGYLAPE----WLSSIITEKVDIYSFGVVMLEILCGRK 437
Q + + T TP Y PE + + I EK DI++ G + L +LC R+
Sbjct: 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI-LYLLCFRQ 250
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 283 EVKTIGSIHHQNLVRLIG--FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKK 340
E++ + + H+N+++L+ + EK +V EY G + + E Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHG 113
Query: 341 IILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQS-QVVTT 399
+ GL YLH Q I+H DIKP N+LL K++ G+++ + + T
Sbjct: 114 YFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 400 MRGTPGYLAPEWLSSIIT---EKVDIYSFGVVMLEILCGRKVFD 440
+G+P + PE + + T KVDI+S GV + I G F+
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 210 NGADEIEEDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVK 268
NG + ++ QVP + +E LKV +GKG FG V + VA+K
Sbjct: 77 NGGYDDDQGSYVQVPHDHVAYRYEVLKV--------IGKGSFGQVVKAYDHKVHQHVALK 128
Query: 269 RLEGIGEINKSFLAEVKTIGSIHHQ------NLVRLIGFCAEKSHNLLVYEYMPNGSLDR 322
+ ++ E++ + + Q N++ ++ ++H + +E + S++
Sbjct: 129 MVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL---SMNL 185
Query: 323 WLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL--DGNFNAK 379
+ + ++F +K I + L LH++ +I+H D+KP+NILL G K
Sbjct: 186 YELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242
Query: 380 VADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYSFGVVMLEILCG 435
V DFG S + Q V T + Y APE L + +D++S G ++ E+L G
Sbjct: 243 VIDFGSSCY----EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I+ I + + YLH I H D+KP+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +T TP Y+APE L +K D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 425 FGVVMLEILCGRKVF 439
GV+M +LCG F
Sbjct: 203 LGVIMYILLCGYPPF 217
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ ++ G F QP
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 210 NGADEIEEDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVK 268
NG + ++ QVP + +E LKV +GKG FG V + VA+K
Sbjct: 77 NGGYDDDQGSYVQVPHDHVAYRYEVLKV--------IGKGSFGQVVKAYDHKVHQHVALK 128
Query: 269 RLEGIGEINKSFLAEVKTIGSIHHQ------NLVRLIGFCAEKSHNLLVYEYMPNGSLDR 322
+ ++ E++ + + Q N++ ++ ++H + +E + S++
Sbjct: 129 MVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL---SMNL 185
Query: 323 WLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL--DGNFNAK 379
+ + ++F +K I + L LH++ +I+H D+KP+NILL G K
Sbjct: 186 YELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242
Query: 380 VADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYSFGVVMLEILCG 435
V DFG S + Q V T + Y APE L + +D++S G ++ E+L G
Sbjct: 243 VIDFGSSCY----EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F +P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S GV+M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
H N++ L + H LV E M G L D+ L Q+ ++ ++ I K +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTV 134
Query: 350 TYLHEDCRQKILHLDIKPQNIL-LDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPG 405
YLH Q ++H D+KP NIL +D + N ++ DFG +K + + ++T T
Sbjct: 135 EYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TAN 190
Query: 406 YLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRS---QPEE 446
++APE L E DI+S G+++ +L G F PEE
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEE 235
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 42/232 (18%)
Query: 238 MTDNF--RKMLGKGGFGSVFEGTQTDGTK-VAVKRLEGIGE--IN-KSFLAEVKTIGSIH 291
+ DN+ + ++G+G +G V+ + K VA+K++ + E I+ K L E+ + +
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLK 85
Query: 292 HQNLVRLIGFCAE----KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK 347
++RL K L + + + L + LF+ L Q K I+ ++
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTP--IFLTEQHVKTILYNLLL 142
Query: 348 GLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQ-------------- 393
G ++HE I+H D+KP N LL+ + + K+ DFGL++ I+ D+
Sbjct: 143 GEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 394 ----------SQVVTTMRGTPGYLAPE--WLSSIITEKVDIYSFGVVMLEIL 433
+ +T+ T Y APE L T +DI+S G + E+L
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 244 KMLGKGGFGSVFEGTQTDGTK-VAVKRLEGIGEIN---KSFLAEVKTIGSIHHQNLVRLI 299
K +G G G V + VA+K+L + K E+ + ++H+N++ L+
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 300 G-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
F +KS Y+ +D L Q + LD ++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQ-VIQMELDHERMSYLLYQMLVGIKHLHSAG-- 146
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI-IT 417
I+H D+KP NI++ + K+ DFGL++ S ++T T Y APE + +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 418 EKVDIYSFGVVMLEILCGRKVF 439
E VDI+S GV+M E++ G +F
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 266 AVKRLEG-IGEINKSFLAEVKTIGSIH-HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRW 323
AVK +E G I EV+ + H+N++ LI F E+ LV+E M GS+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 324 LFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFN---AKV 380
+ +R + + ++ D+A L +LH + I H D+KP+NIL + K+
Sbjct: 102 IHKRRH---FNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 381 ADFGLSKLI--DQDQSQVVT----TMRGTPGYLAPEWL------SSIITEKVDIYSFGVV 428
DFGL I + D S + T T G+ Y+APE + +SI ++ D++S GV+
Sbjct: 156 CDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
Query: 429 MLEILCGRKVF 439
+ +L G F
Sbjct: 216 LYILLSGYPPF 226
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 251 FGSVFEGTQTDGTKVAVKRLEGIGEINKSF---------LAEVKTIGSIHHQNLVRLIG- 300
GS +G ++R I ++++ F E+ + ++H+N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKI 360
F +KS Y+ +D L Q + LD ++ ++ + G+ +LH I
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYLLYQMLCGIKHLHS---AGI 152
Query: 361 LHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI-ITEK 419
+H D+KP NI++ + K+ DFGL++ S ++T T Y APE + + E
Sbjct: 153 IHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 210
Query: 420 VDIYSFGVVMLEILCGRKVF 439
VD++S G +M E++C + +F
Sbjct: 211 VDLWSVGCIMGEMVCHKILF 230
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+++D +V DFG +K + + GTP YLAPE +S
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIISKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 244 KMLGKGGFGSVFEGTQTDGTK-VAVKRLEGIGEIN---KSFLAEVKTIGSIHHQNLVRLI 299
K +G G G V + VA+K+L + K E+ + ++H+N++ L+
Sbjct: 24 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 300 G-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
F +KS Y+ +D L Q + LD ++ ++ + G+ +LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYLLYQMLCGIKHLHS---A 139
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI-IT 417
I+H D+KP NI++ + K+ DFGL++ S ++T T Y APE + +
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 418 EKVDIYSFGVVMLEILCGRKVF 439
E VD++S G +M E++C + +F
Sbjct: 198 ENVDLWSVGCIMGEMVCHKILF 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
H N++ L + H LV E M G L D+ L Q+ ++ ++ I K +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTV 134
Query: 350 TYLHEDCRQKILHLDIKPQNIL-LDGNFNA---KVADFGLSKLIDQDQSQVVTTMRGTPG 405
YLH Q ++H D+KP NIL +D + N ++ DFG +K + + ++T T
Sbjct: 135 EYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TAN 190
Query: 406 YLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVFDRS---QPEE 446
++APE L E DI+S G+++ +L G F PEE
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEE 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP YLAP LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 238 MTDNF--RKMLGKGGFGSVFEGTQTDGTK-VAVKRLEGIGE--IN-KSFLAEVKTIGSIH 291
+ DN+ + ++G+G +G V+ + K VA+K++ + E I+ K L E+ + +
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 292 HQNLVRLIGFCAE----KSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAK 347
++RL K L + + + L + LF+ L + K I+ ++
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTP--IFLTEEHIKTILYNLLL 140
Query: 348 GLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQ-SQVVTTMRGT--P 404
G ++HE I+H D+KP N LL+ + + KV DFGL++ I+ ++ + +V + P
Sbjct: 141 GENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 405 G------------------YLAPE--WLSSIITEKVDIYSFGVVMLEIL 433
G Y APE L T+ +DI+S G + E+L
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 244 KMLGKGGFGSVFEGTQTDGTK-VAVKRLEGIGEIN---KSFLAEVKTIGSIHHQNLVRLI 299
K +G G G V + VA+K+L + K E+ + ++H+N++ L+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 300 G-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
F +KS Y+ +D L Q + LD ++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYLLYQMLCGIKHLHS---A 145
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD---QSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP NI++ + K+ DFGL++ + +VVT Y APE + +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRAPEVILGM 200
Query: 416 -ITEKVDIYSFGVVMLEILCGRKVF 439
E VDI+S G +M E++C + +F
Sbjct: 201 GYKENVDIWSVGCIMGEMVCHKILF 225
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 309 LLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQ 368
L+V E + G L + R D+ + ++ +I I + + YLH I H D+KP+
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTE-REASEIXKSIGEAIQYLHSI---NIAHRDVKPE 190
Query: 369 NILLDG---NFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSIITEK-VDIYS 424
N+L N K+ DFG +K S +TT TP Y+APE L +K D +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDXWS 248
Query: 425 FGVVMLEILCGRKVF 439
GV+ +LCG F
Sbjct: 249 LGVIXYILLCGYPPF 263
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 244 KMLGKGGFGSV-FEGTQTDGTKVAVKRLEG-----IGEINKSFLAEVKTIGSIHHQNLVR 297
K LG G FG V + G A+K L+ + +I + L E + + +++ LV+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVK 105
Query: 298 LIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCR 357
L + S+ +V EY+ G + L +R F + I YLH
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRF--SEPHARFYAAQIVLTFEYLHS--- 159
Query: 358 QKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSII 416
+++ D+KP+N+L+D +V DFG +K + + GTP LAPE LS
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEIILSKGY 215
Query: 417 TEKVDIYSFGVVMLEILCGRKVFDRSQP 444
+ VD ++ GV++ E+ G F QP
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLEGIGEIN---KSFLAEVKTIGSIHHQNLVRLI 299
K +G G G V T G VAVK+L + K E+ + ++H+N++ L+
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 300 G-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
F +K+ Y+ +D L Q LD ++ ++ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQ-VIHMELDHERMSYLLYQMLCGIKHLHS---A 145
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPGYLAPEWLSSI-IT 417
I+H D+KP NI++ + K+ DFGL++ + ++T T Y APE + +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 418 EKVDIYSFGVVMLEILCGRKVF 439
VDI+S G +M E++ G +F
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIF 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 225 GLPKRFSFEELKVMTDNFRKM---LGKGGFGSVFEGTQTD-GTKVAVKRLE------GIG 274
GL R S + V+ ++ ++ +GKG F V + G + AVK ++ G
Sbjct: 10 GLVPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPG 69
Query: 275 EINKSFLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDE-FML 333
+ E + H ++V L+ + +V+E+M L + +R+D F+
Sbjct: 70 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 129
Query: 334 DWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLID 390
+ I + L Y H++ I+H D+KP +LL N+ K+ FG++ I
Sbjct: 130 SEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQ 184
Query: 391 QDQSQVVTTMR-GTPGYLAPEWLS-SIITEKVDIYSFGVVMLEILCG 435
+S +V R GTP ++APE + + VD++ GV++ +L G
Sbjct: 185 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 244 KMLGKGGFGSVFEGTQTDGTK-VAVKRLEGIGEIN---KSFLAEVKTIGSIHHQNLVRLI 299
K +G G G V + VA+K+L + K E+ + ++H+N++ L+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 300 G-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
F +KS Y+ +D L Q + LD ++ ++ + G+ +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYLLYQMLCGIKHLHS---A 145
Query: 359 KILHLDIKPQNILLDGNFNAKVADFGLSKLIDQD---QSQVVTTMRGTPGYLAPEWLSSI 415
I+H D+KP NI++ + K+ DFGL++ + +VVT Y APE + +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRAPEVILGM 200
Query: 416 -ITEKVDIYSFGVVMLEILCGRKVF 439
E VD++S G +M E++C + +F
Sbjct: 201 GYKENVDLWSVGCIMGEMVCHKILF 225
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 29/237 (12%)
Query: 210 NGADEIEEDYLDQVPGLPKRFSFEELKVMTDNFRKMLGKGGFGSVFEGTQTD-GTKVAVK 268
NG + ++ QVP + +E LKV +GKG FG V + VA+K
Sbjct: 77 NGGYDDDQGSYVQVPHDHVAYRYEVLKV--------IGKGXFGQVVKAYDHKVHQHVALK 128
Query: 269 RLEGIGEINKSFLAEVKTIGSIHHQ------NLVRLIGFCAEKSHNLLVYEYMPNGSLDR 322
+ ++ E++ + + Q N++ ++ ++H + +E + S++
Sbjct: 129 MVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL---SMNL 185
Query: 323 WLFQRSDEFM-LDWQQRKKIILDIAKGLTYLHEDCRQKILHLDIKPQNILL--DGNFNAK 379
+ + ++F +K I + L LH++ +I+H D+KP+NILL G K
Sbjct: 186 YELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242
Query: 380 VADFGLSKLIDQDQSQVVTTMRGTPGYLAPE-WLSSIITEKVDIYSFGVVMLEILCG 435
V DFG S + Q V + Y APE L + +D++S G ++ E+L G
Sbjct: 243 VIDFGSSCY----EHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 244 KMLGKGGFGSVFEGTQTD-GTKVAVKRLE------GIGEINKSFLAEVKTIGSIHHQNLV 296
+++GKG F V + G + AVK ++ G + E + H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 297 RLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDE-FMLDWQQRKKIILDIAKGLTYLHED 355
L+ + +V+E+M L + +R+D F+ + I + L Y H++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 356 CRQKILHLDIKPQNILLDGNFNA---KVADFGLSKLIDQDQSQVVTTMR-GTPGYLAPEW 411
I+H D+KP +LL N+ K+ FG++ I +S +V R GTP ++APE
Sbjct: 150 ---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPEV 204
Query: 412 LS-SIITEKVDIYSFGVVMLEILCG 435
+ + VD++ GV++ +L G
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 233 EELKVMTDNFRKM--LGKGGFGSVFEGTQT-DGTKVAVKRLEGI--GEINKSFLAEVK-T 286
E +V D+ + LG+G +G V + G AVKR+ + K L ++ +
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 287 IGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFM-LDWQQRKKIILDI 345
++ V G + + E + + SLD++ Q D+ + KI + I
Sbjct: 87 XRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 346 AKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMRGTPG 405
K L +LH + ++H D+KP N+L++ K DFG+S + D ++ + G
Sbjct: 146 VKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA--GCKP 201
Query: 406 YLAPEWLSSIITE-----KVDIYSFGVVMLEILCGRKVFDR-SQPEEEDMYLLSIFKKKA 459
Y APE ++ + + K DI+S G+ +E+ R +D P ++ ++ +
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 261
Query: 460 EEDKLS-DLVDKHSNDMQSNGEE 481
DK S + VD S ++ N +E
Sbjct: 262 PADKFSAEFVDFTSQCLKKNSKE 284
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYL 132
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 133 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +K+ Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ + +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +K+ Y+ +D L Q + LD ++ +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ-VIQMELDHERMSYL 124
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 125 LYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 179
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ + +F
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +K+ Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ + +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 232 FEELKVMTDNFRKMLGKGGFGSVFEGTQ-TDGTKVAVKRLEG-IGEINKSFLAEVKTIGS 289
FE++ + ++ +LG+G V + AVK +E G I EV+ +
Sbjct: 10 FEDVYQLQED---VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ 66
Query: 290 IH-HQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKG 348
H+N++ LI F E+ LV+E M GS+ + +R + + ++ D+A
Sbjct: 67 CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASA 123
Query: 349 LTYLHEDCRQKILHLDIKPQNILLDGNFN---AKVADFGLSKLI--DQDQSQVVT----T 399
L +LH + I H D+KP+NIL + K+ DF L I + D S + T T
Sbjct: 124 LDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 400 MRGTPGYLAPEWL------SSIITEKVDIYSFGVVMLEILCGRKVF 439
G+ Y+APE + +SI ++ D++S GV++ +L G F
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 291 HHQNLVRLIGFCAEKSHNLLVYEYMPNGSL-DRWLFQRSDEFMLDWQQRKKIILDIAKGL 349
H N++ L + + +V E M G L D+ L Q+ ++ ++ I K +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK----FFSEREASAVLFTITKTV 129
Query: 350 TYLHEDCRQKILHLDIKPQNILL---DGNFNA-KVADFGLSKLIDQDQSQVVTTMRGTPG 405
YLH Q ++H D+KP NIL GN + ++ DFG +K + + ++T T
Sbjct: 130 EYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TAN 185
Query: 406 YLAPEWLSSIITEKV-DIYSFGVVMLEILCGRKVFDRS---QPEE 446
++APE L + DI+S GV++ +L G F PEE
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 244 KMLGKGGFGSVFEGTQTDGTKVAVKRL---EGIGEINKSFLAEVKTIGSI--HHQNLVRL 298
K +G GG VF+ A+K + E + S+ E+ + + H ++RL
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 299 IGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKIILDIAKGLTYLHEDCRQ 358
+ + +V E N L+ WL ++ +D +RK ++ + + +H+
Sbjct: 122 YDYEITDQYIYMVME-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQ---H 174
Query: 359 KILHLDIKPQNILL-DGNFNAKVADFGLSKLIDQDQSQVVT-TMRGTPGYLAPEWLSSII 416
I+H D+KP N L+ DG K+ DFG++ + D + VV + GT Y+ PE + +
Sbjct: 175 GIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 417 TEK------------VDIYSFGVVMLEILCGRKVFDR 441
+ + D++S G ++ + G+ F +
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +K+ Y+ +D L Q + LD ++ +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ-VIQMELDHERMSYL 131
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ + +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 22/229 (9%)
Query: 227 PKRFSFEELKVMTDNFR--KMLGKGGFG--SVFEGTQTDGTKVAVKRLEGIGEINKS--- 279
P +E+++ D+F K++G+G F +V + QT G A+K + + +
Sbjct: 48 PIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQT-GQVYAMKIMNKWDMLKRGEVS 106
Query: 280 -FLAEVKTIGSIHHQNLVRLIGFCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQR 338
F E + + + + +L ++++ LV EY G L L + + + +
Sbjct: 107 CFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER--IPAEMA 164
Query: 339 KKIILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVT 398
+ + +I + +H R +H DIKP NILLD + ++ADFG + D +
Sbjct: 165 RFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL 221
Query: 399 TMRGTPGYLAPEWLSSI--------ITEKVDIYSFGVVMLEILCGRKVF 439
GTP YL+PE L ++ + D ++ GV E+ G+ F
Sbjct: 222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +K+ Y+ +D L Q + LD ++ +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-QMELDHERMSYL 169
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++T
Sbjct: 170 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 224
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ + +F
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 246 LGKGGFGSVFEGTQT-DGTKVAVKRLEG--IGEIN-KSFLAEVKTIGSI-HHQNLVRLIG 300
+G G FGSVF+ + DG A+KR + G ++ ++ L EV + H ++VR
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 76
Query: 301 FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFML----DWQQRKKIILDIAKGLTYLHEDC 356
AE H L+ EY GSL + S+ + + + K ++L + +GL Y+H
Sbjct: 77 AWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGRGLRYIHS-- 131
Query: 357 RQKILHLDIKPQNILL 372
++H+DIKP NI +
Sbjct: 132 -MSLVHMDIKPSNIFI 146
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 283 EVKTIGSIHHQNLVRLIG-FCAEKSHNLLVYEYMPNGSLDRWLFQRSDEFMLDWQQRKKI 341
E+ + ++H+N++ L+ F +KS Y+ +D L Q + LD ++ +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYL 133
Query: 342 ILDIAKGLTYLHEDCRQKILHLDIKPQNILLDGNFNAKVADFGLSKLIDQDQSQVVTTMR 401
+ + G+ +LH I+H D+KP NI++ + K+ DFGL++ S ++
Sbjct: 134 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFV 188
Query: 402 GTPGYLAPEWLSSI-ITEKVDIYSFGVVMLEILCGRKVF 439
T Y APE + + E VDI+S G +M E++ G +F
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,692,433
Number of Sequences: 62578
Number of extensions: 681720
Number of successful extensions: 4301
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 1721
Number of HSP's gapped (non-prelim): 1138
length of query: 558
length of database: 14,973,337
effective HSP length: 104
effective length of query: 454
effective length of database: 8,465,225
effective search space: 3843212150
effective search space used: 3843212150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)