Query 043295
Match_columns 223
No_of_seqs 142 out of 1521
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 03:31:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043295.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043295hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1197 Predicted quinone oxid 100.0 6.4E-34 1.4E-38 206.0 17.7 204 13-223 121-333 (336)
2 COG2130 Putative NADP-dependen 100.0 7.4E-33 1.6E-37 205.5 21.2 215 7-222 119-340 (340)
3 COG0604 Qor NADPH:quinone redu 100.0 3.8E-32 8.2E-37 212.9 22.2 207 7-220 112-326 (326)
4 PLN03154 putative allyl alcoho 100.0 1.3E-31 2.9E-36 213.0 23.8 215 9-223 129-348 (348)
5 COG1064 AdhP Zn-dependent alco 100.0 1.5E-32 3.4E-37 211.0 17.5 194 13-221 142-338 (339)
6 KOG1196 Predicted NAD-dependen 100.0 2.3E-29 5.1E-34 186.3 18.8 219 5-223 120-343 (343)
7 cd08295 double_bond_reductase_ 100.0 2.2E-28 4.7E-33 194.3 23.0 205 15-220 128-338 (338)
8 TIGR02825 B4_12hDH leukotriene 100.0 4.4E-28 9.6E-33 191.5 22.9 206 13-219 112-325 (325)
9 cd08294 leukotriene_B4_DH_like 100.0 8.6E-28 1.9E-32 190.1 23.0 203 16-220 121-329 (329)
10 KOG1198 Zinc-binding oxidoredu 100.0 7.6E-28 1.6E-32 188.9 17.2 203 13-221 126-346 (347)
11 KOG0023 Alcohol dehydrogenase, 100.0 3.2E-27 7E-32 176.8 17.0 201 8-222 153-356 (360)
12 cd08239 THR_DH_like L-threonin 100.0 1.9E-26 4.2E-31 183.2 21.6 192 13-220 139-339 (339)
13 cd08281 liver_ADH_like1 Zinc-d 100.0 1.7E-26 3.6E-31 185.5 20.9 198 13-218 166-371 (371)
14 PRK09880 L-idonate 5-dehydroge 99.9 3.8E-26 8.3E-31 181.7 20.4 190 15-220 147-343 (343)
15 cd08293 PTGR2 Prostaglandin re 99.9 9E-26 1.9E-30 179.8 22.6 204 16-220 130-345 (345)
16 cd08291 ETR_like_1 2-enoyl thi 99.9 4.4E-26 9.5E-31 180.1 20.6 200 13-219 119-324 (324)
17 COG1062 AdhC Zn-dependent alco 99.9 1.6E-26 3.4E-31 175.0 16.3 198 13-219 160-365 (366)
18 TIGR03451 mycoS_dep_FDH mycoth 99.9 1.3E-25 2.8E-30 179.6 20.9 198 13-219 151-357 (358)
19 KOG1202 Animal-type fatty acid 99.9 1.7E-26 3.7E-31 195.8 16.1 205 13-223 1527-1744(2376)
20 TIGR03201 dearomat_had 6-hydro 99.9 3.3E-25 7.1E-30 176.7 21.3 196 13-220 142-349 (349)
21 PLN02178 cinnamyl-alcohol dehy 99.9 3.3E-25 7.1E-30 177.8 20.9 191 13-221 152-349 (375)
22 KOG0022 Alcohol dehydrogenase, 99.9 1.6E-25 3.4E-30 167.3 17.1 198 13-219 167-374 (375)
23 PLN02586 probable cinnamyl alc 99.9 4.5E-25 9.8E-30 176.4 20.5 191 13-221 158-354 (360)
24 PLN02827 Alcohol dehydrogenase 99.9 1.3E-24 2.9E-29 174.7 21.2 199 13-221 168-377 (378)
25 PRK10309 galactitol-1-phosphat 99.9 1.1E-24 2.3E-29 173.7 20.4 200 14-220 138-346 (347)
26 PLN02514 cinnamyl-alcohol dehy 99.9 2.2E-24 4.8E-29 172.3 22.1 193 13-222 155-352 (357)
27 TIGR02822 adh_fam_2 zinc-bindi 99.9 1.4E-24 3E-29 171.7 19.8 184 13-218 141-328 (329)
28 KOG0024 Sorbitol dehydrogenase 99.9 2.1E-24 4.5E-29 162.2 18.9 196 15-222 147-354 (354)
29 cd08233 butanediol_DH_like (2R 99.9 3.6E-24 7.7E-29 171.0 21.5 191 14-218 150-350 (351)
30 cd08292 ETR_like_2 2-enoyl thi 99.9 3.9E-24 8.4E-29 168.9 20.8 200 13-219 115-324 (324)
31 PLN02740 Alcohol dehydrogenase 99.9 5.7E-24 1.2E-28 171.4 21.5 199 13-220 173-381 (381)
32 cd08300 alcohol_DH_class_III c 99.9 9.7E-24 2.1E-28 169.4 21.9 198 13-219 161-368 (368)
33 TIGR02818 adh_III_F_hyde S-(hy 99.9 1.1E-23 2.3E-28 169.0 21.8 199 13-220 160-368 (368)
34 cd08301 alcohol_DH_plants Plan 99.9 1.7E-23 3.7E-28 168.1 21.2 197 13-218 162-368 (369)
35 cd08231 MDR_TM0436_like Hypoth 99.9 2E-23 4.3E-28 167.3 19.8 196 13-220 152-361 (361)
36 cd08277 liver_alcohol_DH_like 99.9 5.9E-23 1.3E-27 164.7 22.1 197 13-219 159-365 (365)
37 cd08244 MDR_enoyl_red Possible 99.9 1.1E-22 2.3E-27 160.7 22.2 201 13-220 118-324 (324)
38 cd08296 CAD_like Cinnamyl alco 99.9 7.9E-23 1.7E-27 162.1 21.5 191 13-219 139-333 (333)
39 cd05282 ETR_like 2-enoyl thioe 99.9 9.8E-23 2.1E-27 160.8 20.6 200 13-219 113-323 (323)
40 KOG0025 Zn2+-binding dehydroge 99.9 6.9E-23 1.5E-27 151.4 17.5 204 10-220 133-352 (354)
41 cd08246 crotonyl_coA_red croto 99.9 1.8E-22 3.8E-27 163.5 21.7 196 13-219 166-392 (393)
42 COG1063 Tdh Threonine dehydrog 99.9 7.6E-23 1.6E-27 162.4 19.1 197 13-220 143-350 (350)
43 cd05288 PGDH Prostaglandin deh 99.9 2.4E-22 5.1E-27 159.0 21.6 202 15-218 122-329 (329)
44 cd08263 Zn_ADH10 Alcohol dehyd 99.9 1.9E-22 4.1E-27 162.0 21.2 197 13-219 162-367 (367)
45 cd08240 6_hydroxyhexanoate_dh_ 99.9 3.4E-22 7.4E-27 159.5 21.6 194 13-219 150-349 (350)
46 cd05284 arabinose_DH_like D-ar 99.9 4E-22 8.6E-27 158.5 21.8 192 13-220 141-340 (340)
47 cd08274 MDR9 Medium chain dehy 99.9 3.7E-22 8E-27 159.3 20.8 193 13-220 153-350 (350)
48 TIGR02819 fdhA_non_GSH formald 99.9 2.7E-22 5.9E-27 161.8 19.5 199 15-221 163-391 (393)
49 TIGR01751 crot-CoA-red crotony 99.9 6.9E-22 1.5E-26 160.2 21.9 198 13-221 162-388 (398)
50 cd08297 CAD3 Cinnamyl alcohol 99.9 9.9E-22 2.1E-26 156.3 22.1 195 13-220 141-341 (341)
51 PTZ00354 alcohol dehydrogenase 99.9 1.1E-21 2.4E-26 155.5 22.2 204 13-222 115-330 (334)
52 cd08285 NADP_ADH NADP(H)-depen 99.9 4.4E-22 9.5E-27 158.9 19.5 198 13-220 142-351 (351)
53 cd08260 Zn_ADH6 Alcohol dehydr 99.9 1.5E-21 3.3E-26 155.5 21.9 197 13-219 140-344 (345)
54 cd08290 ETR 2-enoyl thioester 99.9 1.2E-21 2.6E-26 155.9 20.9 202 13-220 121-341 (341)
55 cd08230 glucose_DH Glucose deh 99.9 5.2E-22 1.1E-26 158.7 18.6 189 15-220 143-355 (355)
56 cd08238 sorbose_phosphate_red 99.9 1.2E-21 2.5E-26 159.4 20.7 177 35-221 174-369 (410)
57 cd08276 MDR7 Medium chain dehy 99.9 2.6E-21 5.5E-26 153.4 21.9 196 13-220 135-336 (336)
58 cd08289 MDR_yhfp_like Yhfp put 99.9 1.3E-21 2.9E-26 154.6 20.2 200 13-220 118-326 (326)
59 cd08243 quinone_oxidoreductase 99.9 3E-21 6.5E-26 152.0 21.7 196 13-218 117-319 (320)
60 cd08278 benzyl_alcohol_DH Benz 99.9 2.4E-21 5.3E-26 155.4 21.3 198 13-219 161-365 (365)
61 cd08254 hydroxyacyl_CoA_DH 6-h 99.9 3.3E-21 7.2E-26 153.0 21.8 193 13-220 140-338 (338)
62 cd05286 QOR2 Quinone oxidoredu 99.9 4.2E-21 9E-26 150.8 21.8 200 14-220 112-320 (320)
63 cd08261 Zn_ADH7 Alcohol dehydr 99.9 3.8E-21 8.3E-26 152.7 21.6 194 13-220 136-337 (337)
64 TIGR03366 HpnZ_proposed putati 99.9 7.9E-22 1.7E-26 152.7 17.1 175 13-200 96-280 (280)
65 cd08250 Mgc45594_like Mgc45594 99.9 3.2E-21 6.9E-26 152.6 20.6 203 14-219 115-329 (329)
66 PRK10754 quinone oxidoreductas 99.9 4.4E-21 9.6E-26 151.7 20.8 200 13-219 115-326 (327)
67 PRK09422 ethanol-active dehydr 99.9 5.3E-21 1.1E-25 151.9 21.4 195 13-221 138-337 (338)
68 cd08284 FDH_like_2 Glutathione 99.9 4.6E-21 1E-25 152.6 21.0 193 13-219 143-343 (344)
69 TIGR01202 bchC 2-desacetyl-2-h 99.9 8.9E-22 1.9E-26 154.3 16.6 175 20-219 128-308 (308)
70 cd05283 CAD1 Cinnamyl alcohol 99.9 2.6E-21 5.7E-26 153.6 19.3 189 13-219 145-337 (337)
71 cd08283 FDH_like_1 Glutathione 99.9 3.7E-21 8.1E-26 155.3 20.4 197 13-220 160-386 (386)
72 cd08237 ribitol-5-phosphate_DH 99.9 1.9E-21 4.1E-26 154.6 18.2 181 16-221 139-340 (341)
73 TIGR02823 oxido_YhdH putative 99.9 7.3E-21 1.6E-25 150.2 21.3 198 13-220 117-323 (323)
74 cd05280 MDR_yhdh_yhfp Yhdh and 99.9 4.7E-21 1E-25 151.3 20.0 199 13-220 118-325 (325)
75 TIGR02817 adh_fam_1 zinc-bindi 99.9 6.8E-21 1.5E-25 151.2 20.8 195 13-219 118-334 (336)
76 cd05278 FDH_like Formaldehyde 99.9 4.2E-21 9.1E-26 153.0 19.4 196 13-220 143-347 (347)
77 cd08270 MDR4 Medium chain dehy 99.9 7.5E-21 1.6E-25 148.9 20.3 192 13-220 108-305 (305)
78 cd08235 iditol_2_DH_like L-idi 99.9 1.1E-20 2.5E-25 150.3 20.7 192 15-219 144-343 (343)
79 cd08282 PFDH_like Pseudomonas 99.9 1.3E-20 2.7E-25 151.8 20.1 196 15-219 154-374 (375)
80 cd08269 Zn_ADH9 Alcohol dehydr 99.9 2.4E-20 5.1E-25 146.5 20.5 190 21-218 113-311 (312)
81 PF00107 ADH_zinc_N: Zinc-bind 99.9 3.6E-21 7.7E-26 132.3 13.8 127 45-183 1-129 (130)
82 cd08236 sugar_DH NAD(P)-depend 99.9 2.5E-20 5.5E-25 148.3 20.6 199 13-218 136-343 (343)
83 cd08265 Zn_ADH3 Alcohol dehydr 99.9 2.4E-20 5.1E-25 150.6 20.7 193 14-218 178-383 (384)
84 cd08253 zeta_crystallin Zeta-c 99.9 5E-20 1.1E-24 145.1 21.9 200 13-220 119-325 (325)
85 cd08251 polyketide_synthase po 99.9 2.5E-20 5.5E-25 145.5 20.0 199 13-218 96-303 (303)
86 cd08287 FDH_like_ADH3 formalde 99.9 3.3E-20 7.3E-25 147.8 21.0 188 18-219 149-344 (345)
87 cd08286 FDH_like_ADH2 formalde 99.9 3.5E-20 7.5E-25 147.7 21.0 194 13-220 141-345 (345)
88 cd08262 Zn_ADH8 Alcohol dehydr 99.9 3.2E-20 7E-25 147.6 20.6 190 17-219 141-341 (341)
89 PRK13771 putative alcohol dehy 99.9 3.1E-20 6.7E-25 147.3 20.3 192 13-220 138-333 (334)
90 cd08256 Zn_ADH2 Alcohol dehydr 99.9 2.9E-20 6.2E-25 148.5 19.8 191 13-218 151-350 (350)
91 cd08279 Zn_ADH_class_III Class 99.9 4.1E-20 9E-25 148.2 20.8 197 13-217 157-362 (363)
92 PRK10083 putative oxidoreducta 99.9 5.1E-20 1.1E-24 146.4 20.4 190 17-222 140-339 (339)
93 cd08266 Zn_ADH_like1 Alcohol d 99.9 1.3E-19 2.9E-24 143.8 22.6 196 13-220 141-342 (342)
94 cd05285 sorbitol_DH Sorbitol d 99.9 6E-20 1.3E-24 146.2 20.5 189 15-218 141-341 (343)
95 cd05279 Zn_ADH1 Liver alcohol 99.9 6.2E-20 1.3E-24 147.2 20.6 197 13-218 158-364 (365)
96 TIGR02824 quinone_pig3 putativ 99.9 1.7E-19 3.7E-24 142.1 22.2 200 14-220 115-325 (325)
97 PRK05396 tdh L-threonine 3-deh 99.9 6.9E-20 1.5E-24 145.7 19.7 190 19-221 146-341 (341)
98 cd08249 enoyl_reductase_like e 99.9 4.3E-20 9.3E-25 146.8 18.3 193 13-220 119-339 (339)
99 cd05276 p53_inducible_oxidored 99.9 2.2E-19 4.7E-24 141.3 21.5 199 13-218 114-323 (323)
100 cd05195 enoyl_red enoyl reduct 99.9 1.5E-19 3.2E-24 140.2 20.0 199 13-218 83-293 (293)
101 cd08288 MDR_yhdh Yhdh putative 99.9 2.1E-19 4.6E-24 141.9 21.0 198 13-220 118-324 (324)
102 TIGR00692 tdh L-threonine 3-de 99.9 1.8E-19 3.8E-24 143.4 20.3 193 15-220 140-340 (340)
103 smart00829 PKS_ER Enoylreducta 99.9 1.9E-19 4E-24 139.4 19.9 199 13-218 79-288 (288)
104 cd05281 TDH Threonine dehydrog 99.9 2E-19 4.2E-24 143.2 20.0 191 15-220 142-341 (341)
105 cd08252 AL_MDR Arginate lyase 99.8 2.8E-19 6.1E-24 141.9 20.4 196 13-219 119-336 (336)
106 cd08268 MDR2 Medium chain dehy 99.8 5.4E-19 1.2E-23 139.5 21.8 201 13-220 119-328 (328)
107 cd08241 QOR1 Quinone oxidoredu 99.8 5.4E-19 1.2E-23 139.1 21.5 198 15-219 116-323 (323)
108 cd08259 Zn_ADH5 Alcohol dehydr 99.8 4E-19 8.6E-24 140.7 20.8 191 13-219 138-332 (332)
109 cd08232 idonate-5-DH L-idonate 99.8 5.6E-19 1.2E-23 140.4 20.1 187 15-220 144-339 (339)
110 cd08299 alcohol_DH_class_I_II_ 99.8 7.8E-19 1.7E-23 141.2 21.0 199 13-220 165-373 (373)
111 cd08245 CAD Cinnamyl alcohol d 99.8 1.2E-18 2.7E-23 138.0 20.3 189 13-218 138-330 (330)
112 cd08272 MDR6 Medium chain dehy 99.8 2.4E-18 5.3E-23 135.7 21.8 195 13-220 119-326 (326)
113 cd08242 MDR_like Medium chain 99.8 7.7E-19 1.7E-23 138.5 18.6 173 21-219 139-318 (319)
114 cd08234 threonine_DH_like L-th 99.8 2.6E-18 5.6E-23 136.3 20.9 189 15-218 138-333 (334)
115 cd08264 Zn_ADH_like2 Alcohol d 99.8 2E-18 4.3E-23 136.5 19.2 183 13-216 138-324 (325)
116 cd08273 MDR8 Medium chain dehy 99.8 2.2E-18 4.8E-23 136.5 19.0 198 13-218 114-330 (331)
117 cd08271 MDR5 Medium chain dehy 99.8 7E-18 1.5E-22 133.1 21.4 195 14-220 117-325 (325)
118 PLN02702 L-idonate 5-dehydroge 99.8 7.1E-18 1.5E-22 135.4 21.6 185 21-219 165-363 (364)
119 cd08298 CAD2 Cinnamyl alcohol 99.8 4.4E-18 9.4E-23 134.8 19.6 183 13-218 143-329 (329)
120 cd08275 MDR3 Medium chain dehy 99.8 1.5E-17 3.2E-22 131.9 22.0 204 14-220 114-337 (337)
121 cd08247 AST1_like AST1 is a cy 99.8 4.3E-18 9.4E-23 136.0 17.8 205 13-220 125-352 (352)
122 cd08248 RTN4I1 Human Reticulon 99.8 3.7E-18 8E-23 136.2 16.2 202 13-219 133-350 (350)
123 cd08255 2-desacetyl-2-hydroxye 99.8 8.8E-18 1.9E-22 129.9 16.6 188 14-218 75-277 (277)
124 cd05289 MDR_like_2 alcohol deh 99.8 2.3E-17 5E-22 129.1 18.4 185 13-218 119-309 (309)
125 cd08267 MDR1 Medium chain dehy 99.8 3.8E-17 8.3E-22 128.6 18.2 191 14-218 119-319 (319)
126 cd08258 Zn_ADH4 Alcohol dehydr 99.8 9.8E-17 2.1E-21 125.8 19.3 157 15-185 142-306 (306)
127 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 6.6E-18 1.4E-22 115.5 6.2 121 78-218 1-127 (127)
128 cd05188 MDR Medium chain reduc 99.7 8.5E-16 1.8E-20 118.1 18.1 146 13-166 109-260 (271)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.8E-12 3.9E-17 104.0 14.3 173 24-221 186-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 6.1E-12 1.3E-16 103.4 15.4 147 35-190 163-335 (509)
131 TIGR00561 pntA NAD(P) transhyd 98.6 4.8E-07 1E-11 74.8 10.1 104 35-139 162-290 (511)
132 PRK11873 arsM arsenite S-adeno 98.5 3.6E-06 7.8E-11 65.0 11.5 167 35-219 76-260 (272)
133 TIGR00518 alaDH alanine dehydr 98.3 1.6E-05 3.4E-10 64.0 12.3 99 36-139 166-273 (370)
134 PRK05476 S-adenosyl-L-homocyst 98.3 1.7E-05 3.8E-10 64.4 11.6 100 24-136 196-302 (425)
135 TIGR00936 ahcY adenosylhomocys 98.2 2.5E-05 5.4E-10 63.2 11.8 99 25-136 180-285 (406)
136 PLN02494 adenosylhomocysteinas 98.2 2E-05 4.3E-10 64.5 10.9 97 26-135 240-343 (477)
137 PRK08306 dipicolinate synthase 98.2 2.7E-05 6E-10 60.8 11.3 93 35-137 150-245 (296)
138 PF12847 Methyltransf_18: Meth 97.9 0.00013 2.9E-09 48.1 8.7 93 36-132 1-110 (112)
139 COG4221 Short-chain alcohol de 97.8 0.00015 3.3E-09 53.9 8.3 77 36-112 5-90 (246)
140 PF01488 Shikimate_DH: Shikima 97.8 0.00021 4.4E-09 49.2 7.6 95 35-137 10-113 (135)
141 PTZ00075 Adenosylhomocysteinas 97.7 0.00042 9E-09 57.0 10.0 88 35-135 252-343 (476)
142 PRK08324 short chain dehydroge 97.6 0.00083 1.8E-08 58.7 11.2 102 36-137 421-561 (681)
143 cd05213 NAD_bind_Glutamyl_tRNA 97.6 0.0016 3.4E-08 51.4 11.5 92 15-115 151-250 (311)
144 PRK05786 fabG 3-ketoacyl-(acyl 97.6 0.00076 1.6E-08 50.8 9.5 102 36-137 4-139 (238)
145 TIGR02853 spore_dpaA dipicolin 97.6 0.0017 3.6E-08 50.6 11.4 107 21-137 129-244 (287)
146 PRK11705 cyclopropane fatty ac 97.6 0.0013 2.8E-08 53.3 11.0 108 19-133 148-267 (383)
147 PF00670 AdoHcyase_NAD: S-aden 97.6 0.0043 9.3E-08 43.6 12.0 109 26-155 9-124 (162)
148 PRK12771 putative glutamate sy 97.5 0.00014 2.9E-09 62.2 4.7 106 23-133 107-253 (564)
149 PRK00377 cbiT cobalt-precorrin 97.4 0.0071 1.5E-07 44.4 12.1 94 35-131 39-143 (198)
150 COG3967 DltE Short-chain dehyd 97.4 0.0014 3.1E-08 47.5 7.8 76 36-112 4-87 (245)
151 PRK12742 oxidoreductase; Provi 97.3 0.004 8.6E-08 46.9 10.6 100 36-137 5-135 (237)
152 PF02353 CMAS: Mycolic acid cy 97.3 0.0012 2.7E-08 50.9 7.9 93 35-133 61-166 (273)
153 COG2242 CobL Precorrin-6B meth 97.3 0.0076 1.6E-07 43.3 11.2 96 35-134 33-136 (187)
154 COG0300 DltE Short-chain dehyd 97.3 0.0017 3.6E-08 49.6 8.1 77 35-112 4-93 (265)
155 TIGR00406 prmA ribosomal prote 97.3 0.0014 2.9E-08 51.2 7.8 95 35-135 158-261 (288)
156 PRK00045 hemA glutamyl-tRNA re 97.3 0.0026 5.6E-08 52.4 9.5 89 17-114 157-253 (423)
157 COG2518 Pcm Protein-L-isoaspar 97.3 0.0043 9.4E-08 45.4 9.4 98 29-134 64-170 (209)
158 PRK05693 short chain dehydroge 97.2 0.0026 5.6E-08 49.1 8.6 74 38-112 2-81 (274)
159 PRK08265 short chain dehydroge 97.2 0.007 1.5E-07 46.4 10.8 77 36-112 5-89 (261)
160 PRK05993 short chain dehydroge 97.2 0.0041 9E-08 48.1 9.4 76 36-112 3-85 (277)
161 PRK06182 short chain dehydroge 97.1 0.0036 7.9E-08 48.3 8.6 76 36-112 2-83 (273)
162 PRK05872 short chain dehydroge 97.1 0.0035 7.5E-08 49.1 8.5 78 36-113 8-95 (296)
163 PF02826 2-Hacid_dh_C: D-isome 97.1 0.004 8.7E-08 44.9 8.2 87 35-134 34-128 (178)
164 COG0686 Ald Alanine dehydrogen 97.1 0.0068 1.5E-07 46.9 9.1 101 35-140 167-275 (371)
165 TIGR00438 rrmJ cell division p 97.0 0.028 6E-07 40.9 11.7 93 35-133 31-146 (188)
166 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.017 3.7E-07 48.0 11.8 77 36-112 209-293 (450)
167 PRK13943 protein-L-isoaspartat 97.0 0.019 4E-07 45.5 11.3 94 35-132 79-179 (322)
168 PRK06139 short chain dehydroge 97.0 0.0062 1.3E-07 48.5 8.6 76 36-112 6-93 (330)
169 PRK04148 hypothetical protein; 97.0 0.0064 1.4E-07 41.4 7.3 74 35-115 15-89 (134)
170 KOG1209 1-Acyl dihydroxyaceton 96.9 0.0076 1.7E-07 44.2 8.0 103 36-138 6-143 (289)
171 TIGR03840 TMPT_Se_Te thiopurin 96.9 0.0096 2.1E-07 44.3 8.9 100 35-135 33-154 (213)
172 PRK06200 2,3-dihydroxy-2,3-dih 96.9 0.0068 1.5E-07 46.4 8.4 77 36-112 5-89 (263)
173 PRK07060 short chain dehydroge 96.9 0.011 2.5E-07 44.5 9.6 75 36-112 8-86 (245)
174 PRK06057 short chain dehydroge 96.9 0.0074 1.6E-07 46.0 8.6 77 36-112 6-88 (255)
175 PRK07109 short chain dehydroge 96.9 0.018 3.9E-07 46.0 11.0 77 36-112 7-94 (334)
176 COG2230 Cfa Cyclopropane fatty 96.9 0.0048 1E-07 47.4 7.3 92 35-137 71-180 (283)
177 COG4122 Predicted O-methyltran 96.9 0.047 1E-06 40.6 12.1 97 35-132 58-165 (219)
178 PF01596 Methyltransf_3: O-met 96.9 0.021 4.6E-07 42.1 10.3 97 35-132 44-154 (205)
179 TIGR03325 BphB_TodD cis-2,3-di 96.8 0.0091 2E-07 45.8 8.2 77 36-112 4-88 (262)
180 PRK00517 prmA ribosomal protei 96.8 0.037 8.1E-07 42.2 11.3 88 35-135 118-215 (250)
181 PRK12829 short chain dehydroge 96.8 0.011 2.4E-07 45.1 8.4 79 35-113 9-96 (264)
182 PRK07576 short chain dehydroge 96.8 0.0079 1.7E-07 46.2 7.6 78 35-112 7-95 (264)
183 PLN02476 O-methyltransferase 96.8 0.072 1.6E-06 41.2 12.6 96 35-131 117-226 (278)
184 PRK12939 short chain dehydroge 96.7 0.026 5.6E-07 42.7 10.2 78 36-113 6-94 (250)
185 PRK08017 oxidoreductase; Provi 96.7 0.011 2.3E-07 45.1 8.1 74 38-112 3-83 (256)
186 TIGR01035 hemA glutamyl-tRNA r 96.7 0.018 3.9E-07 47.4 9.8 84 22-114 160-251 (417)
187 COG2226 UbiE Methylase involve 96.7 0.023 4.9E-07 42.9 9.4 97 35-136 50-159 (238)
188 PRK07825 short chain dehydroge 96.7 0.012 2.6E-07 45.3 8.3 77 36-112 4-87 (273)
189 PF11017 DUF2855: Protein of u 96.7 0.034 7.3E-07 43.6 10.5 92 37-137 136-235 (314)
190 PRK07062 short chain dehydroge 96.7 0.012 2.7E-07 45.1 8.2 77 36-112 7-96 (265)
191 PLN02780 ketoreductase/ oxidor 96.7 0.018 4E-07 45.6 9.3 77 36-112 52-141 (320)
192 PRK06500 short chain dehydroge 96.7 0.013 2.9E-07 44.3 8.3 77 36-112 5-89 (249)
193 PRK13942 protein-L-isoaspartat 96.7 0.053 1.2E-06 40.3 11.0 93 35-132 75-175 (212)
194 COG1748 LYS9 Saccharopine dehy 96.7 0.017 3.6E-07 46.7 8.7 93 38-136 2-102 (389)
195 PRK07806 short chain dehydroge 96.7 0.046 1E-06 41.3 11.0 100 36-135 5-136 (248)
196 PF13460 NAD_binding_10: NADH( 96.6 0.06 1.3E-06 38.7 11.0 89 40-136 1-100 (183)
197 PRK00811 spermidine synthase; 96.6 0.04 8.6E-07 42.9 10.5 95 35-132 75-190 (283)
198 PRK07831 short chain dehydroge 96.6 0.017 3.7E-07 44.2 8.5 78 35-112 15-106 (262)
199 PRK07063 short chain dehydroge 96.6 0.013 2.8E-07 44.8 7.9 77 36-112 6-95 (260)
200 PRK08177 short chain dehydroge 96.6 0.015 3.2E-07 43.5 8.0 74 38-112 2-80 (225)
201 PRK06949 short chain dehydroge 96.6 0.013 2.9E-07 44.6 7.9 78 35-112 7-95 (258)
202 KOG1014 17 beta-hydroxysteroid 96.6 0.024 5.1E-07 44.0 8.9 78 35-113 47-136 (312)
203 PRK08261 fabG 3-ketoacyl-(acyl 96.6 0.0039 8.5E-08 51.8 5.2 88 35-137 32-127 (450)
204 PRK08339 short chain dehydroge 96.6 0.024 5.2E-07 43.5 9.2 77 36-112 7-94 (263)
205 PLN02781 Probable caffeoyl-CoA 96.6 0.12 2.7E-06 39.0 12.8 96 35-131 67-176 (234)
206 PRK07814 short chain dehydroge 96.6 0.015 3.3E-07 44.5 8.1 78 35-112 8-96 (263)
207 cd01078 NAD_bind_H4MPT_DH NADP 96.6 0.061 1.3E-06 39.3 10.9 97 35-136 26-132 (194)
208 PRK06180 short chain dehydroge 96.6 0.016 3.5E-07 44.8 8.1 77 37-113 4-88 (277)
209 PLN02366 spermidine synthase 96.6 0.05 1.1E-06 42.8 10.7 98 35-133 90-206 (308)
210 PLN03209 translocon at the inn 96.6 0.044 9.5E-07 46.6 10.9 41 35-75 78-121 (576)
211 PRK06196 oxidoreductase; Provi 96.6 0.02 4.4E-07 45.2 8.7 78 35-112 24-108 (315)
212 PRK07231 fabG 3-ketoacyl-(acyl 96.5 0.017 3.6E-07 43.8 8.0 78 36-113 4-91 (251)
213 PLN02589 caffeoyl-CoA O-methyl 96.5 0.14 3E-06 39.0 12.6 96 35-131 78-188 (247)
214 PRK11207 tellurite resistance 96.5 0.018 3.8E-07 42.3 7.7 94 35-134 29-135 (197)
215 PRK05867 short chain dehydroge 96.5 0.015 3.3E-07 44.2 7.7 77 36-112 8-95 (253)
216 PRK05866 short chain dehydroge 96.5 0.015 3.3E-07 45.5 7.7 77 36-112 39-126 (293)
217 PRK13255 thiopurine S-methyltr 96.5 0.02 4.4E-07 42.7 7.9 97 35-132 36-154 (218)
218 PRK06841 short chain dehydroge 96.5 0.022 4.8E-07 43.3 8.3 76 36-112 14-98 (255)
219 PRK07890 short chain dehydroge 96.5 0.018 3.8E-07 43.9 7.7 77 36-112 4-91 (258)
220 PRK07832 short chain dehydroge 96.5 0.074 1.6E-06 41.0 11.2 74 39-112 2-87 (272)
221 PRK09291 short chain dehydroge 96.5 0.032 6.9E-07 42.5 9.0 72 37-112 2-82 (257)
222 PRK00107 gidB 16S rRNA methylt 96.4 0.064 1.4E-06 39.0 10.0 94 35-133 44-145 (187)
223 PRK07478 short chain dehydroge 96.4 0.024 5.1E-07 43.2 8.1 77 36-112 5-92 (254)
224 PRK12828 short chain dehydroge 96.4 0.024 5.1E-07 42.5 8.1 77 36-112 6-91 (239)
225 PRK06484 short chain dehydroge 96.4 0.02 4.4E-07 48.5 8.4 77 36-112 4-88 (520)
226 PRK04457 spermidine synthase; 96.4 0.23 4.9E-06 38.3 13.4 96 35-132 65-176 (262)
227 PRK07326 short chain dehydroge 96.4 0.022 4.8E-07 42.8 7.8 77 36-112 5-91 (237)
228 PRK09186 flagellin modificatio 96.4 0.025 5.4E-07 43.0 8.1 77 36-112 3-92 (256)
229 PRK13944 protein-L-isoaspartat 96.4 0.053 1.1E-06 40.1 9.5 95 35-132 71-172 (205)
230 PRK11036 putative S-adenosyl-L 96.4 0.12 2.7E-06 39.5 11.8 96 35-133 43-149 (255)
231 COG1179 Dinucleotide-utilizing 96.4 0.2 4.3E-06 37.7 12.1 102 35-137 28-157 (263)
232 PRK05884 short chain dehydroge 96.3 0.037 8.1E-07 41.3 8.7 73 39-112 2-78 (223)
233 PRK07523 gluconate 5-dehydroge 96.3 0.028 6E-07 42.8 8.1 77 36-112 9-96 (255)
234 TIGR02469 CbiT precorrin-6Y C5 96.3 0.054 1.2E-06 36.1 8.7 94 35-133 18-122 (124)
235 PRK05854 short chain dehydroge 96.3 0.027 5.9E-07 44.5 8.2 77 36-112 13-102 (313)
236 PRK13940 glutamyl-tRNA reducta 96.3 0.035 7.7E-07 45.6 8.9 96 35-138 179-278 (414)
237 PRK06484 short chain dehydroge 96.3 0.026 5.6E-07 47.9 8.4 102 36-137 268-404 (520)
238 PRK06953 short chain dehydroge 96.3 0.048 1.1E-06 40.6 9.0 75 38-113 2-80 (222)
239 PRK05717 oxidoreductase; Valid 96.3 0.034 7.3E-07 42.4 8.3 78 35-112 8-93 (255)
240 PRK08618 ornithine cyclodeamin 96.3 0.03 6.5E-07 44.5 8.2 92 35-136 125-224 (325)
241 PRK14175 bifunctional 5,10-met 96.3 0.058 1.3E-06 41.8 9.4 92 17-136 136-233 (286)
242 PRK06125 short chain dehydroge 96.3 0.04 8.7E-07 42.1 8.7 75 36-112 6-90 (259)
243 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.041 8.9E-07 41.7 8.6 77 36-112 4-91 (253)
244 PRK07453 protochlorophyllide o 96.2 0.04 8.7E-07 43.7 8.8 77 36-112 5-92 (322)
245 PRK07677 short chain dehydroge 96.2 0.03 6.5E-07 42.6 7.7 76 37-112 1-87 (252)
246 PLN02253 xanthoxin dehydrogena 96.2 0.042 9.1E-07 42.5 8.5 77 36-112 17-103 (280)
247 PRK00536 speE spermidine synth 96.2 0.037 8E-07 42.4 7.9 97 35-133 71-171 (262)
248 PRK05876 short chain dehydroge 96.2 0.032 6.9E-07 43.2 7.8 77 36-112 5-92 (275)
249 PRK08703 short chain dehydroge 96.2 0.068 1.5E-06 40.3 9.4 77 36-112 5-96 (239)
250 PRK09242 tropinone reductase; 96.2 0.034 7.4E-07 42.4 7.8 78 36-113 8-98 (257)
251 cd01080 NAD_bind_m-THF_DH_Cycl 96.2 0.077 1.7E-06 37.9 8.9 93 17-136 22-119 (168)
252 PRK07024 short chain dehydroge 96.1 0.052 1.1E-06 41.4 8.7 76 37-112 2-87 (257)
253 cd01065 NAD_bind_Shikimate_DH 96.1 0.044 9.5E-07 38.3 7.6 93 35-135 17-118 (155)
254 PRK08267 short chain dehydroge 96.1 0.052 1.1E-06 41.5 8.6 76 38-113 2-87 (260)
255 PRK06194 hypothetical protein; 96.1 0.036 7.8E-07 43.0 7.9 78 36-113 5-93 (287)
256 PLN02244 tocopherol O-methyltr 96.1 0.034 7.4E-07 44.5 7.8 96 36-134 118-224 (340)
257 TIGR00080 pimt protein-L-isoas 96.1 0.15 3.3E-06 37.9 10.8 94 35-132 76-176 (215)
258 PRK07774 short chain dehydroge 96.1 0.043 9.3E-07 41.6 8.0 77 36-112 5-92 (250)
259 PRK07067 sorbitol dehydrogenas 96.1 0.049 1.1E-06 41.5 8.3 77 36-112 5-89 (257)
260 TIGR01832 kduD 2-deoxy-D-gluco 96.1 0.043 9.3E-07 41.5 7.9 76 36-112 4-89 (248)
261 PF01135 PCMT: Protein-L-isoas 96.1 0.064 1.4E-06 39.8 8.5 100 29-133 64-172 (209)
262 PRK08643 acetoin reductase; Va 96.1 0.038 8.2E-07 42.1 7.6 76 37-112 2-88 (256)
263 PRK03369 murD UDP-N-acetylmura 96.1 0.025 5.5E-07 47.6 7.1 69 35-113 10-80 (488)
264 PRK06482 short chain dehydroge 96.1 0.046 1E-06 42.2 8.1 75 38-112 3-85 (276)
265 PTZ00098 phosphoethanolamine N 96.0 0.13 2.8E-06 39.6 10.4 102 29-134 44-157 (263)
266 PRK08213 gluconate 5-dehydroge 96.0 0.047 1E-06 41.7 8.1 78 35-112 10-98 (259)
267 PRK08340 glucose-1-dehydrogena 96.0 0.043 9.4E-07 41.9 7.9 74 39-112 2-85 (259)
268 PRK08415 enoyl-(acyl carrier p 96.0 0.057 1.2E-06 41.8 8.5 102 36-137 4-147 (274)
269 PRK06138 short chain dehydroge 96.0 0.052 1.1E-06 41.1 8.2 77 36-112 4-90 (252)
270 PRK08263 short chain dehydroge 96.0 0.056 1.2E-06 41.7 8.4 76 37-112 3-86 (275)
271 PRK06505 enoyl-(acyl carrier p 96.0 0.058 1.3E-06 41.7 8.5 77 36-112 6-94 (271)
272 PRK07904 short chain dehydroge 96.0 0.058 1.3E-06 41.2 8.3 77 36-112 7-96 (253)
273 PRK10538 malonic semialdehyde 96.0 0.065 1.4E-06 40.7 8.6 74 39-112 2-83 (248)
274 PRK06128 oxidoreductase; Provi 96.0 0.12 2.7E-06 40.4 10.4 77 35-112 53-143 (300)
275 PRK08862 short chain dehydroge 96.0 0.045 9.8E-07 41.1 7.5 77 36-112 4-92 (227)
276 PRK07402 precorrin-6B methylas 96.0 0.41 9E-06 35.0 13.2 97 35-133 39-142 (196)
277 PRK08589 short chain dehydroge 96.0 0.049 1.1E-06 42.0 7.9 76 36-112 5-91 (272)
278 PRK06483 dihydromonapterin red 96.0 0.06 1.3E-06 40.5 8.2 75 37-112 2-83 (236)
279 PRK06181 short chain dehydroge 96.0 0.047 1E-06 41.7 7.7 77 37-113 1-88 (263)
280 PRK09072 short chain dehydroge 96.0 0.073 1.6E-06 40.7 8.8 78 36-113 4-90 (263)
281 PRK13256 thiopurine S-methyltr 95.9 0.13 2.8E-06 38.6 9.6 100 35-135 42-165 (226)
282 PRK07035 short chain dehydroge 95.9 0.05 1.1E-06 41.3 7.8 77 36-112 7-94 (252)
283 COG2519 GCD14 tRNA(1-methylade 95.9 0.12 2.6E-06 39.0 9.3 95 35-133 93-195 (256)
284 PRK06197 short chain dehydroge 95.9 0.05 1.1E-06 42.7 7.9 78 35-112 14-104 (306)
285 PRK06198 short chain dehydroge 95.9 0.049 1.1E-06 41.6 7.7 78 36-113 5-94 (260)
286 PRK06914 short chain dehydroge 95.9 0.055 1.2E-06 41.8 8.0 76 36-112 2-90 (280)
287 PRK05875 short chain dehydroge 95.9 0.069 1.5E-06 41.2 8.5 77 36-112 6-95 (276)
288 PRK12429 3-hydroxybutyrate deh 95.9 0.074 1.6E-06 40.4 8.5 77 36-112 3-90 (258)
289 PRK05653 fabG 3-ketoacyl-(acyl 95.9 0.069 1.5E-06 40.2 8.3 78 36-113 4-92 (246)
290 PRK06172 short chain dehydroge 95.9 0.053 1.1E-06 41.2 7.7 77 36-112 6-93 (253)
291 PRK12823 benD 1,6-dihydroxycyc 95.9 0.079 1.7E-06 40.4 8.7 76 36-112 7-93 (260)
292 PRK08251 short chain dehydroge 95.9 0.059 1.3E-06 40.8 7.9 76 37-112 2-90 (248)
293 PRK07666 fabG 3-ketoacyl-(acyl 95.9 0.054 1.2E-06 40.8 7.6 77 36-112 6-93 (239)
294 COG0421 SpeE Spermidine syntha 95.9 0.34 7.4E-06 37.7 11.9 94 38-132 78-189 (282)
295 PRK01581 speE spermidine synth 95.9 0.28 6.1E-06 39.4 11.7 95 35-133 149-268 (374)
296 PRK07074 short chain dehydroge 95.8 0.081 1.7E-06 40.3 8.6 76 37-112 2-86 (257)
297 PRK06079 enoyl-(acyl carrier p 95.8 0.06 1.3E-06 41.0 7.8 76 36-112 6-92 (252)
298 PRK06179 short chain dehydroge 95.8 0.03 6.6E-07 43.0 6.2 74 37-113 4-83 (270)
299 TIGR00563 rsmB ribosomal RNA s 95.8 0.24 5.3E-06 41.0 11.7 98 35-134 237-369 (426)
300 PF01262 AlaDh_PNT_C: Alanine 95.8 0.068 1.5E-06 38.2 7.4 100 36-137 19-143 (168)
301 PRK07502 cyclohexadienyl dehyd 95.8 0.12 2.7E-06 40.7 9.5 87 38-134 7-101 (307)
302 PRK08277 D-mannonate oxidoredu 95.8 0.078 1.7E-06 40.9 8.3 77 36-112 9-96 (278)
303 PRK07454 short chain dehydroge 95.8 0.067 1.5E-06 40.3 7.8 77 36-112 5-92 (241)
304 PRK06603 enoyl-(acyl carrier p 95.7 0.093 2E-06 40.2 8.5 77 36-112 7-95 (260)
305 PRK08085 gluconate 5-dehydroge 95.7 0.07 1.5E-06 40.6 7.8 77 36-112 8-95 (254)
306 PRK06720 hypothetical protein; 95.7 0.09 2E-06 37.6 7.7 77 36-112 15-102 (169)
307 PRK13394 3-hydroxybutyrate deh 95.7 0.074 1.6E-06 40.5 7.8 77 36-112 6-93 (262)
308 PRK00258 aroE shikimate 5-dehy 95.7 0.11 2.3E-06 40.4 8.6 93 35-134 121-222 (278)
309 KOG0725 Reductases with broad 95.6 0.077 1.7E-06 41.0 7.6 77 36-112 7-98 (270)
310 PLN03075 nicotianamine synthas 95.6 0.27 5.9E-06 38.4 10.4 96 35-133 122-233 (296)
311 TIGR00477 tehB tellurite resis 95.6 0.12 2.7E-06 37.8 8.3 93 35-134 29-134 (195)
312 KOG1210 Predicted 3-ketosphing 95.6 0.066 1.4E-06 41.7 7.0 79 35-113 31-122 (331)
313 PRK06124 gluconate 5-dehydroge 95.6 0.093 2E-06 39.9 8.0 78 35-112 9-97 (256)
314 PF03446 NAD_binding_2: NAD bi 95.6 0.24 5.2E-06 35.1 9.5 85 39-135 3-96 (163)
315 PF13659 Methyltransf_26: Meth 95.6 0.17 3.6E-06 33.4 8.3 96 37-133 1-115 (117)
316 PRK08628 short chain dehydroge 95.6 0.08 1.7E-06 40.3 7.6 76 36-112 6-92 (258)
317 COG2264 PrmA Ribosomal protein 95.6 0.22 4.8E-06 38.9 9.8 98 35-137 161-267 (300)
318 PRK12936 3-ketoacyl-(acyl-carr 95.6 0.11 2.4E-06 39.1 8.3 77 36-112 5-89 (245)
319 PRK08159 enoyl-(acyl carrier p 95.5 0.1 2.2E-06 40.3 8.1 77 36-112 9-97 (272)
320 PRK14103 trans-aconitate 2-met 95.5 0.39 8.4E-06 36.8 11.2 89 35-132 28-125 (255)
321 PRK12481 2-deoxy-D-gluconate 3 95.5 0.1 2.2E-06 39.8 7.9 76 36-112 7-92 (251)
322 PRK07533 enoyl-(acyl carrier p 95.5 0.12 2.5E-06 39.6 8.3 77 36-112 9-97 (258)
323 KOG1201 Hydroxysteroid 17-beta 95.5 0.084 1.8E-06 40.8 7.2 76 35-112 36-123 (300)
324 PF08241 Methyltransf_11: Meth 95.5 0.019 4.2E-07 36.1 3.4 82 44-131 5-95 (95)
325 PRK08317 hypothetical protein; 95.5 0.26 5.6E-06 36.9 10.1 95 35-133 18-124 (241)
326 PRK14903 16S rRNA methyltransf 95.5 0.32 6.9E-06 40.4 11.2 98 35-135 236-368 (431)
327 PRK06114 short chain dehydroge 95.5 0.094 2E-06 39.9 7.7 77 36-112 7-95 (254)
328 KOG1205 Predicted dehydrogenas 95.4 0.066 1.4E-06 41.4 6.6 104 35-138 10-154 (282)
329 PRK12826 3-ketoacyl-(acyl-carr 95.4 0.11 2.4E-06 39.2 7.8 77 36-112 5-92 (251)
330 PRK06113 7-alpha-hydroxysteroi 95.4 0.096 2.1E-06 39.9 7.4 77 36-112 10-97 (255)
331 TIGR01289 LPOR light-dependent 95.4 0.15 3.3E-06 40.3 8.7 76 37-112 3-90 (314)
332 PRK08226 short chain dehydroge 95.4 0.13 2.8E-06 39.3 8.2 77 36-112 5-91 (263)
333 PRK07985 oxidoreductase; Provi 95.4 0.28 6E-06 38.4 10.1 78 35-112 47-137 (294)
334 COG2227 UbiG 2-polyprenyl-3-me 95.3 0.23 5.1E-06 37.3 8.9 93 36-133 59-161 (243)
335 PF08704 GCD14: tRNA methyltra 95.3 0.18 3.9E-06 38.4 8.4 98 35-133 39-146 (247)
336 PRK07856 short chain dehydroge 95.3 0.096 2.1E-06 39.8 7.1 72 36-112 5-84 (252)
337 PRK08690 enoyl-(acyl carrier p 95.3 0.12 2.6E-06 39.6 7.7 77 36-112 5-93 (261)
338 PRK07097 gluconate 5-dehydroge 95.2 0.17 3.7E-06 38.8 8.5 78 35-112 8-96 (265)
339 PRK12937 short chain dehydroge 95.2 0.39 8.5E-06 36.1 10.4 77 36-112 4-92 (245)
340 TIGR00417 speE spermidine synt 95.2 0.42 9E-06 37.0 10.5 97 35-133 71-186 (270)
341 PRK14189 bifunctional 5,10-met 95.2 0.21 4.6E-06 38.8 8.7 92 18-136 137-233 (285)
342 PRK14191 bifunctional 5,10-met 95.2 0.24 5.2E-06 38.5 8.9 91 18-135 136-231 (285)
343 PRK12550 shikimate 5-dehydroge 95.2 0.21 4.5E-06 38.7 8.7 65 35-112 120-187 (272)
344 PRK08993 2-deoxy-D-gluconate 3 95.2 0.13 2.9E-06 39.1 7.7 76 36-112 9-94 (253)
345 PRK01683 trans-aconitate 2-met 95.2 0.66 1.4E-05 35.5 11.6 90 35-132 30-129 (258)
346 TIGR00507 aroE shikimate 5-deh 95.2 0.19 4.1E-06 38.9 8.6 93 35-135 115-216 (270)
347 PRK07984 enoyl-(acyl carrier p 95.2 0.16 3.5E-06 39.0 8.1 77 36-112 5-93 (262)
348 PRK07791 short chain dehydroge 95.1 0.15 3.3E-06 39.7 8.0 77 36-112 5-101 (286)
349 cd01075 NAD_bind_Leu_Phe_Val_D 95.1 0.1 2.2E-06 38.4 6.7 79 35-124 26-107 (200)
350 PRK06463 fabG 3-ketoacyl-(acyl 95.1 0.16 3.5E-06 38.6 8.0 76 36-112 6-88 (255)
351 PRK06935 2-deoxy-D-gluconate 3 95.1 0.11 2.4E-06 39.6 7.2 77 35-112 13-100 (258)
352 PRK07775 short chain dehydroge 95.1 0.22 4.7E-06 38.5 8.8 78 36-113 9-97 (274)
353 PRK07577 short chain dehydroge 95.1 0.099 2.1E-06 39.1 6.7 71 36-112 2-77 (234)
354 TIGR00138 gidB 16S rRNA methyl 95.1 0.44 9.6E-06 34.4 9.8 94 35-133 41-142 (181)
355 PRK08945 putative oxoacyl-(acy 95.1 0.16 3.4E-06 38.5 7.8 40 35-74 10-52 (247)
356 COG0031 CysK Cysteine synthase 95.1 0.36 7.8E-06 37.7 9.7 62 25-87 45-116 (300)
357 PLN00141 Tic62-NAD(P)-related 95.1 0.19 4.1E-06 38.3 8.3 99 35-136 15-134 (251)
358 PRK12367 short chain dehydroge 95.1 0.26 5.6E-06 37.5 8.9 71 35-112 12-88 (245)
359 PRK07574 formate dehydrogenase 95.1 0.17 3.7E-06 41.2 8.3 86 36-133 191-284 (385)
360 PRK13243 glyoxylate reductase; 95.1 0.2 4.3E-06 40.1 8.5 84 36-133 149-240 (333)
361 PRK06398 aldose dehydrogenase; 95.0 0.047 1E-06 41.8 4.9 72 36-112 5-81 (258)
362 COG3288 PntA NAD/NADP transhyd 95.0 0.11 2.4E-06 40.4 6.5 126 35-164 162-309 (356)
363 PRK12549 shikimate 5-dehydroge 95.0 0.24 5.3E-06 38.6 8.7 92 35-134 125-228 (284)
364 PRK06940 short chain dehydroge 95.0 0.25 5.4E-06 38.2 8.8 75 37-112 2-85 (275)
365 PRK00121 trmB tRNA (guanine-N( 95.0 1 2.2E-05 33.2 12.1 97 35-133 39-156 (202)
366 PLN03139 formate dehydrogenase 95.0 0.2 4.4E-06 40.8 8.4 86 36-133 198-291 (386)
367 KOG1610 Corticosteroid 11-beta 95.0 1.2 2.6E-05 34.9 12.1 105 35-139 27-170 (322)
368 PLN02823 spermine synthase 95.0 1.1 2.4E-05 35.9 12.4 96 35-132 102-219 (336)
369 PRK10901 16S rRNA methyltransf 95.0 0.36 7.8E-06 40.0 10.1 95 35-134 243-373 (427)
370 PF13847 Methyltransf_31: Meth 95.0 0.3 6.5E-06 34.0 8.4 96 36-134 3-111 (152)
371 PRK12384 sorbitol-6-phosphate 94.9 0.14 3.1E-06 39.0 7.3 76 37-112 2-90 (259)
372 PF06325 PrmA: Ribosomal prote 94.9 0.043 9.3E-07 42.9 4.3 104 25-137 147-263 (295)
373 PRK10792 bifunctional 5,10-met 94.9 0.39 8.5E-06 37.3 9.4 91 18-135 138-233 (285)
374 PRK07424 bifunctional sterol d 94.9 0.27 5.9E-06 40.4 9.1 72 36-112 177-254 (406)
375 PRK07889 enoyl-(acyl carrier p 94.9 0.18 3.9E-06 38.5 7.7 77 36-112 6-94 (256)
376 PRK14904 16S rRNA methyltransf 94.9 0.77 1.7E-05 38.3 11.9 95 35-135 249-379 (445)
377 PRK06077 fabG 3-ketoacyl-(acyl 94.9 0.79 1.7E-05 34.6 11.2 101 36-137 5-144 (252)
378 PF01209 Ubie_methyltran: ubiE 94.9 0.26 5.7E-06 37.2 8.3 96 35-136 46-156 (233)
379 TIGR01809 Shik-DH-AROM shikima 94.9 0.15 3.3E-06 39.7 7.3 73 36-113 124-200 (282)
380 KOG1252 Cystathionine beta-syn 94.9 0.19 4.1E-06 39.6 7.6 58 25-83 86-154 (362)
381 TIGR00446 nop2p NOL1/NOP2/sun 94.9 1.2 2.6E-05 34.3 12.2 96 35-134 70-200 (264)
382 PRK08287 cobalt-precorrin-6Y C 94.8 1 2.2E-05 32.6 11.3 92 35-132 30-130 (187)
383 PRK06997 enoyl-(acyl carrier p 94.8 0.17 3.7E-06 38.7 7.5 77 36-112 5-93 (260)
384 TIGR02622 CDP_4_6_dhtase CDP-g 94.8 0.15 3.3E-06 40.8 7.5 73 36-112 3-84 (349)
385 PRK08264 short chain dehydroge 94.8 0.18 3.9E-06 37.9 7.5 74 36-113 5-83 (238)
386 TIGR02632 RhaD_aldol-ADH rhamn 94.8 0.14 3.1E-06 45.0 7.7 77 36-112 413-502 (676)
387 PF05724 TPMT: Thiopurine S-me 94.8 0.12 2.7E-06 38.5 6.4 98 35-133 36-155 (218)
388 PRK05447 1-deoxy-D-xylulose 5- 94.8 0.59 1.3E-05 37.9 10.4 93 38-132 2-121 (385)
389 PRK14967 putative methyltransf 94.8 1.3 2.7E-05 33.2 12.4 92 35-133 35-159 (223)
390 PF00106 adh_short: short chai 94.8 0.091 2E-06 37.0 5.5 76 38-113 1-90 (167)
391 TIGR03206 benzo_BadH 2-hydroxy 94.8 0.33 7.2E-06 36.6 8.9 77 36-112 2-89 (250)
392 COG3963 Phospholipid N-methylt 94.8 1 2.2E-05 32.1 11.2 120 15-135 26-158 (194)
393 TIGR01963 PHB_DH 3-hydroxybuty 94.8 0.17 3.7E-06 38.3 7.3 76 37-112 1-87 (255)
394 COG0169 AroE Shikimate 5-dehyd 94.7 0.27 5.9E-06 38.2 8.2 89 35-134 124-227 (283)
395 PRK12548 shikimate 5-dehydroge 94.7 0.26 5.7E-06 38.5 8.3 55 24-78 107-173 (289)
396 PRK05650 short chain dehydroge 94.7 0.21 4.6E-06 38.4 7.8 74 39-112 2-86 (270)
397 PRK08416 7-alpha-hydroxysteroi 94.7 0.26 5.5E-06 37.7 8.2 77 36-112 7-96 (260)
398 PRK08594 enoyl-(acyl carrier p 94.7 0.27 5.9E-06 37.6 8.3 77 36-112 6-96 (257)
399 PRK14968 putative methyltransf 94.7 0.25 5.5E-06 35.6 7.7 40 35-75 22-62 (188)
400 PRK06101 short chain dehydroge 94.7 0.45 9.7E-06 35.9 9.3 38 38-75 2-42 (240)
401 PRK15469 ghrA bifunctional gly 94.7 0.29 6.2E-06 38.8 8.4 85 36-134 135-227 (312)
402 PRK11933 yebU rRNA (cytosine-C 94.6 0.88 1.9E-05 38.2 11.5 98 35-135 112-244 (470)
403 PRK14192 bifunctional 5,10-met 94.6 0.37 8.1E-06 37.5 8.8 75 35-136 157-234 (283)
404 PRK06141 ornithine cyclodeamin 94.6 0.23 4.9E-06 39.4 7.8 91 35-135 123-221 (314)
405 PRK10258 biotin biosynthesis p 94.6 1.5 3.2E-05 33.4 15.3 92 35-134 41-141 (251)
406 TIGR00308 TRM1 tRNA(guanine-26 94.6 1.1 2.5E-05 36.4 11.8 92 39-133 47-147 (374)
407 CHL00194 ycf39 Ycf39; Provisio 94.6 0.2 4.2E-06 39.7 7.4 91 39-135 2-111 (317)
408 PRK07340 ornithine cyclodeamin 94.6 0.24 5.3E-06 39.0 7.8 92 35-136 123-220 (304)
409 PRK14902 16S rRNA methyltransf 94.6 0.52 1.1E-05 39.3 10.1 96 35-133 249-379 (444)
410 TIGR01829 AcAcCoA_reduct aceto 94.6 0.23 5E-06 37.3 7.5 75 38-112 1-87 (242)
411 PRK08642 fabG 3-ketoacyl-(acyl 94.6 0.62 1.4E-05 35.2 9.9 77 36-112 4-90 (253)
412 PRK08303 short chain dehydroge 94.5 0.27 5.8E-06 38.7 8.0 32 36-67 7-41 (305)
413 PRK12743 oxidoreductase; Provi 94.5 0.25 5.4E-06 37.6 7.7 76 37-112 2-89 (256)
414 PRK07370 enoyl-(acyl carrier p 94.5 0.21 4.5E-06 38.2 7.3 102 36-137 5-151 (258)
415 PRK14618 NAD(P)H-dependent gly 94.5 0.62 1.3E-05 37.1 10.1 88 38-134 5-105 (328)
416 PF03435 Saccharop_dh: Sacchar 94.5 0.64 1.4E-05 37.9 10.4 89 40-133 1-98 (386)
417 PRK14027 quinate/shikimate deh 94.5 0.63 1.4E-05 36.3 9.8 44 35-78 125-171 (283)
418 PLN00203 glutamyl-tRNA reducta 94.5 0.49 1.1E-05 40.2 9.8 95 37-137 266-373 (519)
419 PRK14901 16S rRNA methyltransf 94.5 0.75 1.6E-05 38.3 10.8 97 35-134 251-385 (434)
420 PRK09135 pteridine reductase; 94.4 0.28 6E-06 37.0 7.8 77 36-112 5-94 (249)
421 COG0373 HemA Glutamyl-tRNA red 94.4 1 2.3E-05 36.9 11.1 95 35-138 176-279 (414)
422 PRK14188 bifunctional 5,10-met 94.4 0.49 1.1E-05 37.1 9.0 90 18-136 137-233 (296)
423 PRK05134 bifunctional 3-demeth 94.4 0.38 8.2E-06 36.2 8.4 94 35-133 47-151 (233)
424 PLN02928 oxidoreductase family 94.4 0.28 6.2E-06 39.4 8.0 91 36-134 158-263 (347)
425 PRK12335 tellurite resistance 94.4 0.24 5.2E-06 38.7 7.5 91 36-133 120-223 (287)
426 PRK06523 short chain dehydroge 94.4 0.21 4.6E-06 38.1 7.0 72 36-112 8-86 (260)
427 PRK12938 acetyacetyl-CoA reduc 94.3 0.19 4.1E-06 37.9 6.7 78 36-113 2-91 (246)
428 PRK07069 short chain dehydroge 94.3 0.27 5.9E-06 37.1 7.5 73 40-112 2-88 (251)
429 PF02670 DXP_reductoisom: 1-de 94.3 1.1 2.3E-05 30.5 9.4 87 44-131 8-119 (129)
430 TIGR02752 MenG_heptapren 2-hep 94.3 0.6 1.3E-05 35.0 9.3 96 35-134 44-152 (231)
431 TIGR02992 ectoine_eutC ectoine 94.3 0.29 6.4E-06 39.0 7.9 90 35-135 127-226 (326)
432 PRK08278 short chain dehydroge 94.3 0.28 6E-06 37.9 7.6 34 36-69 5-41 (273)
433 PRK13403 ketol-acid reductoiso 94.3 0.86 1.9E-05 36.1 10.0 84 35-131 14-104 (335)
434 PRK00312 pcm protein-L-isoaspa 94.3 1.3 2.8E-05 32.8 10.8 94 35-133 77-175 (212)
435 PRK09134 short chain dehydroge 94.3 0.42 9.1E-06 36.4 8.4 77 36-112 8-96 (258)
436 PRK05557 fabG 3-ketoacyl-(acyl 94.2 0.38 8.3E-06 36.1 8.1 77 36-112 4-92 (248)
437 TIGR02415 23BDH acetoin reduct 94.2 0.28 6.1E-06 37.2 7.4 75 38-112 1-86 (254)
438 KOG1207 Diacetyl reductase/L-x 94.2 0.45 9.9E-06 34.0 7.5 40 36-75 6-48 (245)
439 PRK05855 short chain dehydroge 94.2 0.24 5.1E-06 42.5 7.6 78 36-113 314-402 (582)
440 PRK05565 fabG 3-ketoacyl-(acyl 94.1 0.28 6.1E-06 36.9 7.2 76 37-112 5-92 (247)
441 PRK08063 enoyl-(acyl carrier p 94.1 0.29 6.2E-06 37.0 7.2 77 36-112 3-91 (250)
442 PRK15451 tRNA cmo(5)U34 methyl 94.1 0.29 6.2E-06 37.3 7.1 95 35-134 55-165 (247)
443 COG0623 FabI Enoyl-[acyl-carri 94.1 1.9 4.1E-05 32.4 12.2 171 36-210 5-234 (259)
444 PRK07201 short chain dehydroge 94.1 0.36 7.7E-06 42.3 8.6 76 37-112 371-457 (657)
445 PF01564 Spermine_synth: Sperm 94.1 0.52 1.1E-05 35.9 8.4 96 35-133 75-191 (246)
446 PRK08219 short chain dehydroge 94.0 0.39 8.5E-06 35.6 7.7 71 38-113 4-81 (227)
447 PF03807 F420_oxidored: NADP o 94.0 0.94 2E-05 28.7 10.8 84 39-132 1-93 (96)
448 PRK07417 arogenate dehydrogena 94.0 0.72 1.6E-05 35.8 9.3 84 39-133 2-91 (279)
449 TIGR01934 MenG_MenH_UbiE ubiqu 94.0 0.71 1.5E-05 34.2 9.0 98 35-135 38-145 (223)
450 PRK14169 bifunctional 5,10-met 94.0 0.72 1.6E-05 35.8 9.0 92 18-136 135-231 (282)
451 KOG2018 Predicted dinucleotide 93.9 1.8 4E-05 34.0 10.9 31 35-65 72-105 (430)
452 PRK07102 short chain dehydroge 93.9 0.52 1.1E-05 35.5 8.2 37 38-74 2-41 (243)
453 PRK14176 bifunctional 5,10-met 93.9 0.8 1.7E-05 35.6 9.1 91 18-135 143-238 (287)
454 KOG4022 Dihydropteridine reduc 93.8 0.38 8.2E-06 33.9 6.5 92 37-136 3-132 (236)
455 PF10727 Rossmann-like: Rossma 93.8 0.36 7.8E-06 32.7 6.3 80 36-126 9-91 (127)
456 PLN00015 protochlorophyllide r 93.8 0.4 8.6E-06 37.8 7.6 69 44-112 7-84 (308)
457 PRK06171 sorbitol-6-phosphate 93.8 0.13 2.8E-06 39.4 4.8 73 36-112 8-86 (266)
458 PRK14190 bifunctional 5,10-met 93.7 0.86 1.9E-05 35.4 9.1 92 18-136 137-233 (284)
459 PLN02233 ubiquinone biosynthes 93.7 0.49 1.1E-05 36.4 7.8 97 35-135 72-184 (261)
460 PLN02336 phosphoethanolamine N 93.7 0.69 1.5E-05 38.9 9.3 97 35-134 265-370 (475)
461 PRK08936 glucose-1-dehydrogena 93.7 0.49 1.1E-05 36.1 7.9 77 36-112 6-94 (261)
462 PF13561 adh_short_C2: Enoyl-( 93.7 0.26 5.7E-06 37.1 6.3 161 44-211 6-225 (241)
463 PRK00216 ubiE ubiquinone/menaq 93.7 1.4 3.1E-05 32.9 10.3 98 35-135 50-160 (239)
464 PRK14177 bifunctional 5,10-met 93.7 0.89 1.9E-05 35.3 9.0 91 18-135 138-233 (284)
465 PF02882 THF_DHG_CYH_C: Tetrah 93.7 0.45 9.8E-06 33.6 6.9 95 16-137 13-112 (160)
466 cd05212 NAD_bind_m-THF_DH_Cycl 93.6 0.73 1.6E-05 31.8 7.8 90 19-135 8-102 (140)
467 PRK03612 spermidine synthase; 93.6 1.6 3.5E-05 37.2 11.4 96 35-133 296-415 (521)
468 PRK05599 hypothetical protein; 93.6 0.45 9.8E-06 36.1 7.5 72 39-112 2-86 (246)
469 TIGR01983 UbiG ubiquinone bios 93.6 0.92 2E-05 33.8 9.0 94 37-133 46-149 (224)
470 COG1052 LdhA Lactate dehydroge 93.5 0.91 2E-05 36.1 9.2 85 36-134 145-237 (324)
471 PRK07066 3-hydroxybutyryl-CoA 93.5 3.1 6.8E-05 33.1 12.1 38 38-75 8-47 (321)
472 smart00828 PKS_MT Methyltransf 93.5 0.61 1.3E-05 34.8 7.9 92 39-134 2-105 (224)
473 PRK06701 short chain dehydroge 93.5 0.5 1.1E-05 36.9 7.7 78 35-112 44-133 (290)
474 PRK14178 bifunctional 5,10-met 93.5 1 2.3E-05 34.9 9.1 90 18-135 131-226 (279)
475 PLN02490 MPBQ/MSBQ methyltrans 93.5 1.2 2.7E-05 35.6 9.8 95 35-133 112-215 (340)
476 PRK04266 fibrillarin; Provisio 93.5 1.2 2.7E-05 33.4 9.4 95 35-132 71-175 (226)
477 COG2084 MmsB 3-hydroxyisobutyr 93.5 1 2.2E-05 35.1 9.0 43 39-82 2-47 (286)
478 TIGR02356 adenyl_thiF thiazole 93.4 1 2.3E-05 33.1 8.9 33 35-67 19-54 (202)
479 PRK14194 bifunctional 5,10-met 93.4 0.91 2E-05 35.6 8.8 90 18-135 138-233 (301)
480 COG0334 GdhA Glutamate dehydro 93.4 0.33 7.2E-06 39.4 6.5 54 15-69 184-241 (411)
481 PRK14173 bifunctional 5,10-met 93.4 0.91 2E-05 35.4 8.7 92 18-136 134-230 (287)
482 PRK14183 bifunctional 5,10-met 93.4 0.84 1.8E-05 35.4 8.5 91 18-135 136-231 (281)
483 PRK13581 D-3-phosphoglycerate 93.4 0.82 1.8E-05 39.0 9.3 33 36-68 139-173 (526)
484 PLN02657 3,8-divinyl protochlo 93.3 0.46 9.9E-06 38.9 7.5 77 35-112 58-145 (390)
485 cd05211 NAD_bind_Glu_Leu_Phe_V 93.3 0.51 1.1E-05 35.3 7.0 35 35-69 21-57 (217)
486 PRK14170 bifunctional 5,10-met 93.3 1 2.2E-05 35.0 8.8 92 18-136 136-232 (284)
487 KOG1200 Mitochondrial/plastidi 93.3 0.83 1.8E-05 33.4 7.7 75 37-112 14-99 (256)
488 PRK07792 fabG 3-ketoacyl-(acyl 93.3 0.83 1.8E-05 35.9 8.7 76 35-112 10-98 (306)
489 PRK08220 2,3-dihydroxybenzoate 93.2 0.5 1.1E-05 35.7 7.2 72 36-113 7-86 (252)
490 PRK03659 glutathione-regulated 93.2 1.3 2.8E-05 38.6 10.3 91 38-132 401-497 (601)
491 PRK10669 putative cation:proto 93.2 1.4 3E-05 38.0 10.5 91 38-132 418-514 (558)
492 PF07991 IlvN: Acetohydroxy ac 93.1 2.2 4.7E-05 30.2 10.0 84 36-132 3-94 (165)
493 TIGR01318 gltD_gamma_fam gluta 93.1 0.45 9.7E-06 40.0 7.3 73 36-113 140-236 (467)
494 PLN02896 cinnamyl-alcohol dehy 93.1 1.1 2.3E-05 36.1 9.3 40 35-74 8-50 (353)
495 COG2521 Predicted archaeal met 93.1 0.98 2.1E-05 34.0 8.0 98 35-136 133-248 (287)
496 PRK11088 rrmA 23S rRNA methylt 93.1 1.1 2.4E-05 34.7 8.9 92 36-133 85-181 (272)
497 TIGR00537 hemK_rel_arch HemK-r 93.0 1.5 3.2E-05 31.5 9.1 91 35-134 18-141 (179)
498 PRK12746 short chain dehydroge 93.0 1.1 2.4E-05 33.9 8.8 78 36-113 5-100 (254)
499 PRK04338 N(2),N(2)-dimethylgua 93.0 3.4 7.4E-05 33.8 11.9 92 37-132 58-157 (382)
500 PRK12745 3-ketoacyl-(acyl-carr 93.0 0.69 1.5E-05 35.0 7.7 75 38-112 3-89 (256)
No 1
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.4e-34 Score=205.99 Aligned_cols=204 Identities=20% Similarity=0.272 Sum_probs=176.5
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+..+|++...++|||.-+++.. ++|++||+| |+||++++|++|..|++++++..+.+|++.++ +.|+++.++++
T Consensus 121 ~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~ 199 (336)
T KOG1197|consen 121 LKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYS 199 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeecc
Confidence 4588999999999999999988 999999999 99999999999999999999999999999999 99999999999
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
.+ ++.+++.+++++ |+|+++|.+|.+++..++++|++.|.+|.+|..++.. .++++..+-.+++.+.......
T Consensus 200 ~e-D~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~-----~p~~l~~ls~k~l~lvrpsl~g 273 (336)
T KOG1197|consen 200 TE-DYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLI-----DPIPLNQLSPKALQLVRPSLLG 273 (336)
T ss_pred ch-hHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCCC-----CCeehhhcChhhhhhccHhhhc
Confidence 98 999999999988 9999999999999999999999999999999877642 2334444444555443333222
Q ss_pred c---cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecCC
Q 043295 167 H---FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAGE 223 (223)
Q Consensus 167 ~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~~ 223 (223)
+ +........+++.++.+|.+++.+.++|||+++.+|+..++++...||+++.+.+|
T Consensus 274 Yi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 274 YIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred ccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 2 33344466778888899999999999999999999999999999999999998765
No 2
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=7.4e-33 Score=205.48 Aligned_cols=215 Identities=41% Similarity=0.691 Sum_probs=192.5
Q ss_pred CCcchhhhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC
Q 043295 7 ESHRSCYVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD 81 (223)
Q Consensus 7 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~ 81 (223)
++..+++.....+.+++.|||.+|.+++ ++|++|+|- |+||..+.|+||..|++|++++.+++|..++++++|.|
T Consensus 119 ~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD 198 (340)
T COG2130 119 PSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD 198 (340)
T ss_pred CCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc
Confidence 4455667788999999999999999999 899999999 99999999999999999999999999999999669999
Q ss_pred eeeecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccC-CCCchHHHHhhcceEE
Q 043295 82 DAFNYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKR-AVPNMIDIVYKRIKIQ 160 (223)
Q Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 160 (223)
.++||+.+ ++.+.+.+..++|+|+.||++|++.++..+..|+..+|++.||..+.++....+ .+.....++.+.+++.
T Consensus 199 ~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~ 277 (340)
T COG2130 199 AGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQ 277 (340)
T ss_pred eeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeE
Confidence 99999998 999999999999999999999999999999999999999999998888764322 3334456666799999
Q ss_pred eeec-cCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecC
Q 043295 161 GFLS-TDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAG 222 (223)
Q Consensus 161 g~~~-~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~ 222 (223)
|+.. ..+.....+..+++..++.+|+|+-..+.+-+||++++||.-|.+++.+||+|+++.+
T Consensus 278 Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 278 GFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred EEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 9998 4455666799999999999999998887666999999999999999999999999863
No 3
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.8e-32 Score=212.90 Aligned_cols=207 Identities=27% Similarity=0.441 Sum_probs=176.4
Q ss_pred CCcchhhhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC
Q 043295 7 ESHRSCYVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD 81 (223)
Q Consensus 7 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~ 81 (223)
+.+++ +++||++++.++|||++|.... ++|++|||+ |+||.+++|+||.+|+++++++.++++.++++ ++|++
T Consensus 112 P~~ls-~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd 189 (326)
T COG0604 112 PDGLS-FEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGAD 189 (326)
T ss_pred CCCCC-HHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCC
Confidence 34555 5699999999999999999966 889999999 99999999999999987777777888888888 99999
Q ss_pred eeeecCCcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEE
Q 043295 82 DAFNYKEETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQ 160 (223)
Q Consensus 82 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
++++|.+. ++.+++++.+++ ++|+|+|++|++.+..++.+|+++|+++.+|..++ . ....++...++.+.....
T Consensus 190 ~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g-~---~~~~~~~~~~~~~~~~~~ 264 (326)
T COG0604 190 HVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG-G---PPVPLNLLPLLGKRLTLR 264 (326)
T ss_pred EEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC-C---CccccCHHHHhhccEEEE
Confidence 99999998 899999999999 99999999999999999999999999999998774 1 233455777888888888
Q ss_pred eeeccCc-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHc-CCCcCcEEEEe
Q 043295 161 GFLSTDH-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFR-GDNIGKKFVRI 220 (223)
Q Consensus 161 g~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~-~~~~gk~v~~~ 220 (223)
|+..... +....+.+.++.+++.+|.++|.+..+|||++..++...... ++..||+|+++
T Consensus 265 g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 265 GVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred EecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 8777642 345567888999999999999999999999995444443333 58899999974
No 4
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-31 Score=213.00 Aligned_cols=215 Identities=52% Similarity=0.940 Sum_probs=177.6
Q ss_pred cchhhhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee
Q 043295 9 HRSCYVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA 83 (223)
Q Consensus 9 ~~~~~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~ 83 (223)
..+...++|++++++.|||+++.... ++|++|||+ |++|++++|+|+..|++|+++++++++.+.+++++|++.+
T Consensus 129 ~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v 208 (348)
T PLN03154 129 DIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA 208 (348)
T ss_pred CCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE
Confidence 34433368899999999999997765 899999999 8899999999999999999999999999988646999999
Q ss_pred eecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeee
Q 043295 84 FNYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFL 163 (223)
Q Consensus 84 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 163 (223)
+|+.+.+++.+.+++.+++++|++|||+|+..+..++++++++|+++.+|..............+...++.+++++.|+.
T Consensus 209 i~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~ 288 (348)
T PLN03154 209 FNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFL 288 (348)
T ss_pred EECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEE
Confidence 99875226778888877668999999999989999999999999999999765321100001224566778899999987
Q ss_pred ccCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecCC
Q 043295 164 STDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAGE 223 (223)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~~ 223 (223)
...+.....+.++++++++++|++++.+..+++|+++.+||+.+.+++..||+|+++.+|
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 289 QSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 655433345678889999999999998888899999999999999999999999999765
No 5
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.5e-32 Score=211.00 Aligned_cols=194 Identities=25% Similarity=0.334 Sum_probs=176.9
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
++.||++.|++.|.|++|++.. +||++|+|. |++|++++|+|+.+|++|++++++++|.+.++ ++|++++++.++.
T Consensus 142 ~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~~ 220 (339)
T COG1064 142 LAEAAPLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS 220 (339)
T ss_pred hhhhhhhhcCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCCc
Confidence 5689999999999999999988 999999999 99999999999999999999999999999999 9999999998755
Q ss_pred ccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccc
Q 043295 90 TDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFD 169 (223)
Q Consensus 90 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (223)
+..+.+++. +|+++|+++...+..+++.|+++|+++.+|.+.. ......+...++.+++++.|+....
T Consensus 221 -~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~--- 288 (339)
T COG1064 221 -DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT--- 288 (339)
T ss_pred -hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC---
Confidence 777777664 9999999997789999999999999999999851 1233567788899999999999998
Q ss_pred hHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 170 LHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 170 ~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
+..+++++++..+|.++|.+...++++++++|+++|.+++..|++|+++.
T Consensus 289 --~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 --RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred --HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 78899999999999999999778999999999999999999999999864
No 6
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.97 E-value=2.3e-29 Score=186.34 Aligned_cols=219 Identities=53% Similarity=0.933 Sum_probs=198.0
Q ss_pred cCCCcchhhhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC
Q 043295 5 NEESHRSCYVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG 79 (223)
Q Consensus 5 ~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g 79 (223)
+.+...+++.-...+.++++|||-++++++ ++|++|+|- |.+|+++.|+|+.+|++|++.+.|++|.+.+++++|
T Consensus 120 ~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G 199 (343)
T KOG1196|consen 120 QHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFG 199 (343)
T ss_pred CCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccC
Confidence 334567778888999999999999999999 889999999 999999999999999999999999999999998899
Q ss_pred CCeeeecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceE
Q 043295 80 FDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKI 159 (223)
Q Consensus 80 ~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
.+..+||.++.+..+.+++..+.|+|+-||.+|+..++..+..|+..|+++.+|..+.++.+.+..--+....+.+++++
T Consensus 200 ~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~i 279 (343)
T KOG1196|consen 200 FDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRI 279 (343)
T ss_pred CccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEe
Confidence 99999999876888889998888999999999999999999999999999999998888776655555667888999999
Q ss_pred EeeeccCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecCC
Q 043295 160 QGFLSTDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAGE 223 (223)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~~ 223 (223)
.|+...++.+.+.+.++.+..++++|+|+-.-+..-.|+..++||.-|.+|+..||.++.+..|
T Consensus 280 qgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 280 QGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred eeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence 9999888877788999999999999999877665558999999999999999999999998754
No 7
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.97 E-value=2.2e-28 Score=194.25 Aligned_cols=205 Identities=58% Similarity=1.016 Sum_probs=169.6
Q ss_pred hhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh-hCCCeeeecCC
Q 043295 15 FANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK-LGFDDAFNYKE 88 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 88 (223)
+++++++++.|||+++.+.. ++|++|+|+ |++|.+++|+|+..|++|+++++++++.+.++ + +|+++++++.+
T Consensus 128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~-~~lGa~~vi~~~~ 206 (338)
T cd08295 128 YLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK-NKLGFDDAFNYKE 206 (338)
T ss_pred HHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhcCCceeEEcCC
Confidence 68999999999999997765 999999999 89999999999999999999999999999999 6 99999999764
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
..++.+.+++.+++++|++||++|+..+..++++++++|+++.+|..............+...+..+++++.++......
T Consensus 207 ~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 286 (338)
T cd08295 207 EPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL 286 (338)
T ss_pred cccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhH
Confidence 22677888887766999999999998899999999999999999865432110000112345666778888887665543
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
....+.++++++++.+|.+++.+...++++++.+|++.+.+++..||+|+++
T Consensus 287 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 287 HRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 3345678889999999999988777799999999999999999999999874
No 8
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.97 E-value=4.4e-28 Score=191.51 Aligned_cols=206 Identities=44% Similarity=0.750 Sum_probs=166.3
Q ss_pred hhhh-hccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeec
Q 043295 13 YVFA-NGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNY 86 (223)
Q Consensus 13 ~~~a-a~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (223)
++++ +++++++.|||+++.+.. ++|++|||+ |++|.+++|+|+..|++|+++++++++.+.++ ++|++.++++
T Consensus 112 ~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~ 190 (325)
T TIGR02825 112 LSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNY 190 (325)
T ss_pred HHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEec
Confidence 3455 689999999999987766 899999999 89999999999999999999999999999998 8999999998
Q ss_pred CCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccccccccc-ccCCCCchHHHHhhcceEEeeecc
Q 043295 87 KEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADA-SKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 87 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
++.+.+.+.++..+++++|++|||+|++.+..++++++++|+++.+|........ ..........++.+++++.++...
T Consensus 191 ~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 270 (325)
T TIGR02825 191 KTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVN 270 (325)
T ss_pred cccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEeh
Confidence 7632566666666655899999999998889999999999999999865432100 001111234456677888887654
Q ss_pred Cc-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 166 DH-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 166 ~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+ .....+.++++++++++|.+++.+..+++++++.+|++.+.+++..||+|++
T Consensus 271 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 271 RWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 33 2233567888999999999998877788999999999999999999999974
No 9
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.96 E-value=8.6e-28 Score=190.13 Aligned_cols=203 Identities=43% Similarity=0.760 Sum_probs=168.5
Q ss_pred hhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 16 ANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 16 aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
+++++++++|||+++.... ++|++|||+ |++|.+++|+|+..|++|+++++++++.+.++ ++|++.++++++.
T Consensus 121 ~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~- 198 (329)
T cd08294 121 LGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV- 198 (329)
T ss_pred HHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-
Confidence 4578899999999997666 899999999 89999999999999999999999999999999 8999999999877
Q ss_pred cHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccC-CCCchHHHHhhcceEEeeeccCccc
Q 043295 91 DLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKR-AVPNMIDIVYKRIKIQGFLSTDHFD 169 (223)
Q Consensus 91 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (223)
++.+.+++.+++++|++||++|++.+..++++++++|+++.+|........... .......+..+++++.++....+..
T Consensus 199 ~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 278 (329)
T cd08294 199 SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQD 278 (329)
T ss_pred cHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHH
Confidence 888888888767899999999998899999999999999999864332110000 1223445677888888876544323
Q ss_pred hHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 170 LHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 170 ~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
...+.++++++++++|.+++....+++++++.+|++.+.+++..||+|+++
T Consensus 279 ~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 279 RWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 345678889999999999987667789999999999999999999999874
No 10
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.96 E-value=7.6e-28 Score=188.90 Aligned_cols=203 Identities=25% Similarity=0.379 Sum_probs=161.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--------hCCCEEEEE---CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--------QKGEKVFVS---GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGF 80 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--------~~g~~vlI~---g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~ 80 (223)
++++|++|.++.|||+++.... ++|++|||+ |+||++++|+|+.+|+ +|++++ ++++.++++ ++|+
T Consensus 126 ~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~~~l~k-~lGA 203 (347)
T KOG1198|consen 126 FEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEKLELVK-KLGA 203 (347)
T ss_pred hhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccchHHHHH-HcCC
Confidence 5699999999999999998754 788999999 8999999999999995 555555 888999999 9999
Q ss_pred CeeeecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEE
Q 043295 81 DDAFNYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQ 160 (223)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
++++||++. ++.+.+.+.++++||+||||+|+.+......++..+|+...++..++...+.... ..+. . .+.+++.
T Consensus 204 d~vvdy~~~-~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~-~~~~-~-~~~~~~~ 279 (347)
T KOG1198|consen 204 DEVVDYKDE-NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD-DLWQ-S-ANGIKLY 279 (347)
T ss_pred cEeecCCCH-HHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc-cchh-h-hhhhhhe
Confidence 999999998 9999999998449999999999988888999999888766666555432211111 1111 1 2221111
Q ss_pred e--eeccCc----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 161 G--FLSTDH----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 161 g--~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
. .....+ .....+.++.+.+++++|+++|.+.+.||++++.+||+.+.++...||+|+.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 280 SLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred eeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 1 111111 344578899999999999999999999999999999999999999999999875
No 11
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=3.2e-27 Score=176.84 Aligned_cols=201 Identities=19% Similarity=0.216 Sum_probs=173.3
Q ss_pred CcchhhhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeee
Q 043295 8 SHRSCYVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAF 84 (223)
Q Consensus 8 ~~~~~~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~ 84 (223)
.+.++ +.||++.|++.|+|.+|.+.. .||+++-|. |++|.+++|+||++|.+|++++++.++.+.+-+.||++..+
T Consensus 153 ~~~pl-~~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv 231 (360)
T KOG0023|consen 153 ENLPL-ASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFV 231 (360)
T ss_pred CCCCh-hhccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeE
Confidence 34443 399999999999999999999 999999999 88999999999999999999999985444444389999888
Q ss_pred ecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 85 NYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+..++.++.+.+...+++++|-+.+. ..-.+..++.+++.+|++|.+|.+.. ...++..++..+..++.|+..
T Consensus 232 ~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~GS~v 304 (360)
T KOG0023|consen 232 DSTEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIKGSIV 304 (360)
T ss_pred EecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEEeecc
Confidence 88843389999999888777777766 33468889999999999999998764 346677888999999999999
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecC
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAG 222 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~ 222 (223)
.. +...+++++++.++.+++++. ..+++++++||++|.++...+|.|++++.
T Consensus 305 G~-----~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 305 GS-----RKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred cc-----HHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 98 788999999999999999884 57999999999999999999999999864
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.95 E-value=1.9e-26 Score=183.19 Aligned_cols=192 Identities=21% Similarity=0.247 Sum_probs=163.7
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++++++++.|||+++.... ++|++|+|+ |++|++++|+|+..|++ |+++++++++++.++ ++|++.++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCc
Confidence 4578889999999999997766 889999999 99999999999999998 999999999999998 999999999887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChH-HHHHHHHhhccCcEEEEEcccccccccccCCCCc-hHHHHhhcceEEeeecc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVISECADASKRAVPN-MIDIVYKRIKIQGFLST 165 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~ 165 (223)
. + .+.+++.+++ ++|++|||+|+. .+..++++++++|+++.+|..... ..+ ...++.+++++.|+...
T Consensus 218 ~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~g~~~~ 288 (339)
T cd08239 218 D-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-------TIEVSNDLIRKQRTLIGSWYF 288 (339)
T ss_pred c-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-------ccCcHHHHHhCCCEEEEEecC
Confidence 6 5 7778887777 999999999985 457889999999999999975431 122 24567789999998765
Q ss_pred CccchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
. .+.++++++++.+|.+++ .++++++++++.+||+.+.++. .||+|++|
T Consensus 289 ~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 289 S-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred C-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 5 467888999999999875 5778899999999999998875 69999975
No 13
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.95 E-value=1.7e-26 Score=185.53 Aligned_cols=198 Identities=18% Similarity=0.199 Sum_probs=167.8
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.... +++++|+|+ |++|++++|+|+..|+ +|++++.++++++.++ ++|++.++++.
T Consensus 166 ~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~ 244 (371)
T cd08281 166 LEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-ELGATATVNAG 244 (371)
T ss_pred hHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-HcCCceEeCCC
Confidence 4578888889999999986655 899999999 9999999999999999 6999999999999998 99999999988
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+. ++.+.+++.+++++|++|||+|+ ..+..++++++++|+++.+|..... ....++...++.+++++.|+....
T Consensus 245 ~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~ 319 (371)
T cd08281 245 DP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPALSLVAEERTLKGSYMGS 319 (371)
T ss_pred ch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHHHHhhcCCEEEEEecCC
Confidence 76 78888888877789999999996 6889999999999999999975421 122456667888999999987654
Q ss_pred ccchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
+. .++.+.++++++.+|.+++ .++.+|+|+++.+||+.+.+++..+|+|+
T Consensus 320 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 320 CV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 31 1356788899999999975 46788999999999999999998888764
No 14
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.95 E-value=3.8e-26 Score=181.68 Aligned_cols=190 Identities=18% Similarity=0.189 Sum_probs=158.6
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
+.+++..++.|||+++.+.. .++++|+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++|++.++|+++.
T Consensus 147 ~~aa~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~- 224 (343)
T PRK09880 147 KVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKLVNPQND- 224 (343)
T ss_pred HHHHhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEEecCCcc-
Confidence 34567788899999998877 789999999 9999999999999999 6999999999999999 8999999998775
Q ss_pred cHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccc
Q 043295 91 DLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFD 169 (223)
Q Consensus 91 ~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (223)
++.+.. +. .+++|++|||+|+ ..+..++.+++++|+++.+|.... ...+++..++.+++++.|+...
T Consensus 225 ~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~---- 292 (343)
T PRK09880 225 DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKGSFRF---- 292 (343)
T ss_pred cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEEEeec----
Confidence 554322 22 2369999999997 578899999999999999996432 2245667778899999887643
Q ss_pred hHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 170 LHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 170 ~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.+.++++++++++|.+++ .++++|+|+++++|++.+.++...||+++.+
T Consensus 293 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 --TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred --cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 245788999999999986 4678899999999999999888789999864
No 15
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.95 E-value=9e-26 Score=179.75 Aligned_cols=204 Identities=35% Similarity=0.615 Sum_probs=158.9
Q ss_pred hhccccchhhHHHHHHHHh--hCC--CEEEEE---CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 16 ANGAGTSGFTAYVGFYEIS--QKG--EKVFVS---GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 16 aa~l~~~~~ta~~~l~~~~--~~g--~~vlI~---g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.++.|||+++.+.. +++ ++|||+ |++|++++|+|+..|+ +|+++++++++.+.+++++|++.++++.
T Consensus 130 ~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~ 209 (345)
T cd08293 130 LGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK 209 (345)
T ss_pred hhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC
Confidence 5678889999999997765 655 999999 8999999999999999 8999999999999998349999999988
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccC-CCCc--hHHH-HhhcceEEeee
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKR-AVPN--MIDI-VYKRIKIQGFL 163 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~~-~~~~~~~~g~~ 163 (223)
+. ++.+.+++.+++++|++|||+|+..+..++++++++|+++.+|........... .... ...+ ..++++..++.
T Consensus 210 ~~-~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08293 210 TD-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFL 288 (345)
T ss_pred CC-CHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEE
Confidence 76 888889888766899999999998889999999999999999854321100000 0111 1111 22344444443
Q ss_pred ccCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 164 STDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.........+.++++++++++|.+++....+++++++.+|++.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 289 VLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred eeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 222233345678889999999999987666679999999999999998899999874
No 16
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.95 E-value=4.4e-26 Score=180.07 Aligned_cols=200 Identities=20% Similarity=0.279 Sum_probs=164.7
Q ss_pred hhhhhccccchhhHHHHHHHHhhCCCEEEEE----CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEISQKGEKVFVS----GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~~~g~~vlI~----g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++++++.++|||..+.....+++.++|+ |++|++++|+|+..|++|+++++++++.+.++ ++|+++++++.+
T Consensus 119 ~~~aa~~~~~~~ta~~~~~~~~~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~ 197 (324)
T cd08291 119 FEQGASSFVNPLTALGMLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSD 197 (324)
T ss_pred HHHHhhhcccHHHHHHHHHhhccCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCC
Confidence 4477888889999986553332455555554 89999999999999999999999999999999 899999999887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. ++.+.+++.+++ ++|++|||+|+......+.+++++|+++.+|...... ...++...++.+++++.++....+
T Consensus 198 ~-~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 272 (324)
T cd08291 198 P-DFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTW 272 (324)
T ss_pred c-cHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHh
Confidence 6 888999988887 9999999999988888999999999999998754321 112445667788999999887654
Q ss_pred -cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 168 -FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 168 -~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.....+.++++++++. |.+++.++.+|+|+++.+||+.+.+++..||++++
T Consensus 273 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 273 LQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred hcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 2223567888888888 99999999999999999999999999999999974
No 17
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.95 E-value=1.6e-26 Score=174.97 Aligned_cols=198 Identities=22% Similarity=0.209 Sum_probs=171.2
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
++.++.+.|...|.+-+..+.. ++|++|.|. |++|++++|-|+..|+ ++++++.+++|+++++ +||+++++|..
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~-~fGAT~~vn~~ 238 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPK 238 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH-hcCCceeecch
Confidence 4588889999999999888877 999999999 9999999999999999 9999999999999999 99999999988
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+..+..+.+.+++++|+|++|||+|+ ..++.++.++.++|+.+.+|..... ...+.+...+... .+|+|+....
T Consensus 239 ~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~~~lv~g-r~~~Gs~~G~ 313 (366)
T COG1062 239 EVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEISTRPFQLVTG-RVWKGSAFGG 313 (366)
T ss_pred hhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeecChHHeecc-ceEEEEeecC
Confidence 75358999999999999999999997 7899999999999999999987653 2334555666555 8899988876
Q ss_pred ccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.. -+.++..+++++.+|+++.. ++..++|++++|||+.|++++.+ |-|+.
T Consensus 314 ~~--p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 314 AR--PRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred Cc--cccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 41 25678999999999999755 77789999999999999999987 55543
No 18
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.95 E-value=1.3e-25 Score=179.61 Aligned_cols=198 Identities=20% Similarity=0.242 Sum_probs=165.3
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.+.. +++++|||+ |++|++++|+|+..|+ +|+++++++++++.++ ++|++.++++.
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~Ga~~~i~~~ 229 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFGATHTVNSS 229 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEcCC
Confidence 4578888889999999887665 899999999 9999999999999999 5999999999999998 99999999988
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
+. ++.+.+++.+++ ++|++|||+|+ +.+..++.+++++|+++.+|.+... ....+++..++.++.++.++...
T Consensus 230 ~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~~~~~~ 304 (358)
T TIGR03451 230 GT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGGALKSSWYG 304 (358)
T ss_pred Cc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCCEEEEeecC
Confidence 76 788889888887 89999999996 6789999999999999999975431 11234556777888999887643
Q ss_pred CccchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
... ..+.++++++++.+|.+++ .++.+||++++.+|++.+.+++.. |+++.
T Consensus 305 ~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 305 DCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred CCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 211 1456888999999999976 478889999999999999988765 77764
No 19
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=1.7e-26 Score=195.80 Aligned_cols=205 Identities=20% Similarity=0.325 Sum_probs=175.8
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC---CCeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG---FDDAF 84 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g---~~~~~ 84 (223)
.++|++.|+.+.|||++|...+ ++|++|||| |+||++|+.+|...|++|+.|+.|.+|++++.+.|. ...+-
T Consensus 1527 leeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~ 1606 (2376)
T KOG1202|consen 1527 LEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFA 1606 (2376)
T ss_pred hhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhccc
Confidence 4589999999999999999888 999999999 999999999999999999999999999999985443 35667
Q ss_pred ecCCcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeee
Q 043295 85 NYKEETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFL 163 (223)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 163 (223)
|+++. +|..-+++-|+| |+|+|+++...+.++.+++||+-+|++..+|...-++ .+......|.++.++.|..
T Consensus 1607 NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSq-----NspLGMavfLkNvsfHGiL 1680 (2376)
T KOG1202|consen 1607 NSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQ-----NSPLGMAVFLKNVSFHGIL 1680 (2376)
T ss_pred ccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceeccc-----CCcchhhhhhcccceeeee
Confidence 88887 999999999999 9999999999999999999999999999999765421 1334467788999999999
Q ss_pred ccCccchHHHHHHHHHHH----HHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecCC
Q 043295 164 STDHFDLHQDFISMTCDA----LRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAGE 223 (223)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~----~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~~ 223 (223)
+..+++--.+.+.++..+ +.+|.++|..+.+|+-.++++||+.|.+|+++||+|+++..|
T Consensus 1681 LDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1681 LDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred hhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence 887744334445555444 556788999999999999999999999999999999998543
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.94 E-value=3.3e-25 Score=176.72 Aligned_cols=196 Identities=20% Similarity=0.209 Sum_probs=162.9
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
++++++++.++.|+|+++.+.. +++++|+|+ |++|++++|+|+..|++|+++++++++++.++ ++|++.++++.+.
T Consensus 142 ~~~~a~~~~~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~ 220 (349)
T TIGR03201 142 LEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDK 220 (349)
T ss_pred HHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccc
Confidence 4478888999999999998755 899999999 99999999999999999999999999999998 8999999887653
Q ss_pred --ccHHHHHHHhCCC-Ccc----EEEcCCChH-HHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEe
Q 043295 90 --TDLKATLKRYFPD-GID----VYFDNVGGE-MLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQG 161 (223)
Q Consensus 90 --~~~~~~i~~~~~~-~~d----~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (223)
.++.+.+++.+++ |+| ++|||+|+. .+..++++++++|+++.+|..... ..+++..++.++.++.|
T Consensus 221 ~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g 294 (349)
T TIGR03201 221 SAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALG 294 (349)
T ss_pred cHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEE
Confidence 1467778888877 786 899999974 577889999999999999976431 23455666677788888
Q ss_pred eeccCccchHHHHHHHHHHHHHcCCCCcc-ceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 162 FLSTDHFDLHQDFISMTCDALRAGKIQPL-EDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~-~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+.... ...++.+++++++|.+++. +..+++|+++.+||+.+.+++..||+++++
T Consensus 295 ~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 295 NWGCP-----PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EecCC-----HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 76543 4568889999999999753 334689999999999999999889998853
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.94 E-value=3.3e-25 Score=177.82 Aligned_cols=191 Identities=18% Similarity=0.168 Sum_probs=159.2
Q ss_pred hhhhhccccchhhHHHHHHHHh---hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHH-HHHHHHhhCCCeeeec
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS---QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEK-VAILKEKLGFDDAFNY 86 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~---~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~-~~~~~~~~g~~~~~~~ 86 (223)
+++++++++++.|+|+++.... ++|++|+|. |++|++++|+|+..|++|++++.++++ .+.++ ++|+++++++
T Consensus 152 ~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa~~~i~~ 230 (375)
T PLN02178 152 SDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGADSFLVT 230 (375)
T ss_pred HHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCCcEEEcC
Confidence 4578889999999999997765 589999999 999999999999999999999877554 67777 8999999886
Q ss_pred CCcccHHHHHHHhCCCCccEEEcCCChH-HHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 87 KEETDLKATLKRYFPDGIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 87 ~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
.+. +.+++.++ ++|++|||+|+. .+..++++++++|+++.+|.+.. ...++...++.++.++.|+...
T Consensus 231 ~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~ 299 (375)
T PLN02178 231 TDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGRKMVGGSQIG 299 (375)
T ss_pred cCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCCeEEEEeCcc
Confidence 542 34555443 699999999975 68899999999999999987532 1245667777889999988765
Q ss_pred CccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
. .+.+.++++++.+|++++.+ .+|||+++++||+.+.+++..||+|+++.
T Consensus 300 ~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 300 G-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred C-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 5 45688899999999999887 56999999999999999988899999873
No 22
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=1.6e-25 Score=167.26 Aligned_cols=198 Identities=18% Similarity=0.194 Sum_probs=170.4
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
.+.++-+.+...|+|-|..+.+ ++|+++.|+ |+||++++|-||..|+ ++++++-+++|++.++ ++|+++.+|..
T Consensus 167 l~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak-~fGaTe~iNp~ 245 (375)
T KOG0022|consen 167 LEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAK-EFGATEFINPK 245 (375)
T ss_pred hhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHH-hcCcceecChh
Confidence 3488899999999999988888 999999999 9999999999999999 9999999999999999 99999999887
Q ss_pred Cc-ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccC-cEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EE-TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLF-GRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+. ....+.+++.|++|+|+-|||+|+ +.+.+++.+++.+ |+-+.+|..... ...+.+++.++ ++.++.|+..
T Consensus 246 d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~----~~i~~~p~~l~-~GR~~~Gs~F 320 (375)
T KOG0022|consen 246 DLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG----QEISTRPFQLV-TGRTWKGSAF 320 (375)
T ss_pred hccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC----cccccchhhhc-cccEEEEEec
Confidence 42 248899999999999999999998 6899999999998 999999987653 33444555444 5888899888
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
..+.. ++.+..+.+.+.++.++.. +++++||+++++||+.|.+++.. |.|+.
T Consensus 321 GG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 321 GGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred ccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 87643 6778889999999977654 88889999999999999999877 66664
No 23
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.94 E-value=4.5e-25 Score=176.39 Aligned_cols=191 Identities=17% Similarity=0.156 Sum_probs=156.8
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHH-HHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVA-ILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~-~~~~~~g~~~~~~~~ 87 (223)
++++|++++++.|+|+++.... ++|++|+|. |++|++++|+|+..|++|++++.++++.. .++ ++|++.++++.
T Consensus 158 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~Ga~~vi~~~ 236 (360)
T PLN02586 158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RLGADSFLVST 236 (360)
T ss_pred HHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hCCCcEEEcCC
Confidence 4578899999999999997766 789999999 99999999999999999998887766544 455 89999998866
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+. +.+++.++ ++|++||++|+ ..+..++++++++|+++.+|.... ...+++..++.++..+.|+....
T Consensus 237 ~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~~ 305 (360)
T PLN02586 237 DP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRKLVGGSDIGG 305 (360)
T ss_pred CH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCeEEEEcCcCC
Confidence 43 24444444 69999999997 478899999999999999986532 22455666677788877776554
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
...++++++++.+|.+++.+ .+|+|+++.+||+.+.+++..||+|+++.
T Consensus 306 -----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 354 (360)
T PLN02586 306 -----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA 354 (360)
T ss_pred -----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 45688899999999999876 47999999999999999988899999873
No 24
>PLN02827 Alcohol dehydrogenase-like
Probab=99.94 E-value=1.3e-24 Score=174.73 Aligned_cols=199 Identities=19% Similarity=0.183 Sum_probs=163.1
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|+|+++.+.. ++|++|||+ |++|++++|+|+..|+ .|++++.++++.+.++ ++|++.+++++
T Consensus 168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~-~lGa~~~i~~~ 246 (378)
T PLN02827 168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK-TFGVTDFINPN 246 (378)
T ss_pred HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcEEEccc
Confidence 3477888888899998876654 899999999 9999999999999999 5888888999999998 99999999887
Q ss_pred Cc-ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccC-cEEEEEcccccccccccCCCCch-HHHHhhcceEEeee
Q 043295 88 EE-TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLF-GRVAACGVISECADASKRAVPNM-IDIVYKRIKIQGFL 163 (223)
Q Consensus 88 ~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~ 163 (223)
+. +++.+.+++.+++++|++|||+|+ ..+..+++.++++ |+++.+|.+... ..+.. ..++.+++++.|+.
T Consensus 247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~------~~~~~~~~~~~~~~~i~g~~ 320 (378)
T PLN02827 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK------PEVSAHYGLFLSGRTLKGSL 320 (378)
T ss_pred ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC------ccccccHHHHhcCceEEeee
Confidence 52 256777887776689999999997 4789999999998 999999976431 12222 35677899999987
Q ss_pred ccCccchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 164 STDHFDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
...+. ....+.++++++.+|.+++ .++.+|+|+++.+|++.+.+++. +|+||.+.
T Consensus 321 ~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 321 FGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred cCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 65431 1345788999999999998 68889999999999999998876 69999874
No 25
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.94 E-value=1.1e-24 Score=173.72 Aligned_cols=200 Identities=19% Similarity=0.181 Sum_probs=157.2
Q ss_pred hhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 14 VFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
++++.+ .+..++|+++.... +++++|+|+ |++|++++|+|+..|++ |+++++++++++.++ ++|++.++++++.
T Consensus 138 ~~aa~~-~~~~~~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~ 215 (347)
T PRK10309 138 EDGAFI-EPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM 215 (347)
T ss_pred HHhhhh-hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc
Confidence 355544 35666888865444 899999999 99999999999999996 788999999999998 8999999988765
Q ss_pred ccHHHHHHHhCCC-Ccc-EEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 90 TDLKATLKRYFPD-GID-VYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 90 ~~~~~~i~~~~~~-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+ .+.+.+.+++ ++| ++|||+|+ ..+..++++++++|+++.+|...... .....++..++.+++++.|+....
T Consensus 216 -~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~---~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 216 -S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDL---HLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred -C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCc---ccChhhhhHHhhcCcEEEEEeccc
Confidence 4 5667777766 898 99999997 57899999999999999999764310 111112335677889999976542
Q ss_pred ccchHHHHHHHHHHHHHcCCCC--ccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 HFDLHQDFISMTCDALRAGKIQ--PLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
......+.++++++++.+|.++ +.++.+++|+++.+|++.+.+++..||+|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 1111235678899999999985 56888899999999999999988889999976
No 26
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.94 E-value=2.2e-24 Score=172.33 Aligned_cols=193 Identities=21% Similarity=0.173 Sum_probs=160.1
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++++++++.|||+++.... ++|++++|+ |++|++++|+|+..|++|++++.++++.+.+.+++|++.++++.+
T Consensus 155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~ 234 (357)
T PLN02514 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSD 234 (357)
T ss_pred HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCC
Confidence 4578899999999999998776 789999999 999999999999999999999888877766654799988776543
Q ss_pred cccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. +.+.+.++ ++|++|||+|+ ..+..++++++++|+++.+|.... ...++...++.++.++.|+....
T Consensus 235 ~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~- 302 (357)
T PLN02514 235 A----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKVITGSFIGS- 302 (357)
T ss_pred h----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcEEEEEecCC-
Confidence 2 23444443 69999999996 578899999999999999997642 12455667778899999987765
Q ss_pred cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecC
Q 043295 168 FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAG 222 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~ 222 (223)
...++++++++.+|.+++.+ .+|+|+++.+||+.+.+++..||+|+.++.
T Consensus 303 ----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 303 ----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred ----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 45688899999999998776 479999999999999999988999998853
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.93 E-value=1.4e-24 Score=171.66 Aligned_cols=184 Identities=15% Similarity=0.098 Sum_probs=153.4
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
+++++++++++.|||+++.... ++|++|+|+ |++|++++|+|+..|++|+++++++++++.++ ++|+++++++.+.
T Consensus 141 ~~~aa~l~~~~~ta~~~~~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~ 219 (329)
T TIGR02822 141 DVELAPLLCAGIIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT 219 (329)
T ss_pred HHHhHHHhccchHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc
Confidence 4478889999999999997655 899999999 99999999999999999999999999999999 9999999875432
Q ss_pred ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 90 TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 90 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
. .+++|+++++.+. +.+..++++++++|+++.+|..... ...+++..++.+++++.|+....
T Consensus 220 -~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-- 282 (329)
T TIGR02822 220 -P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSNT-- 282 (329)
T ss_pred -C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecCC--
Confidence 1 1258888887764 6889999999999999999975321 12345566777888888876544
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
+..+.++++++.+|.+++ ++++|+|+++++||+.+.+++..||+|+
T Consensus 283 ---~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 283 ---RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred ---HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 456788899999999985 5688999999999999999999999987
No 28
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=2.1e-24 Score=162.19 Aligned_cols=196 Identities=21% Similarity=0.214 Sum_probs=167.5
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCc-
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEE- 89 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 89 (223)
+..++..++.++|||.++.. ++|++|||+ |++|+.+...||.+|+ +|+.++..+.|++.++ ++|++.+.+....
T Consensus 147 eeGAl~ePLsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~ 225 (354)
T KOG0024|consen 147 EEGALIEPLSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSSHKS 225 (354)
T ss_pred hhcccccchhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeeccccc
Confidence 56778999999999999988 999999999 9999999999999999 9999999999999999 8999888765552
Q ss_pred --ccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 90 --TDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 90 --~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
..+.+.+.+..++ .+|+.|||+|. ..++.++..++.+|+++.+|.... ...++......+++++.|+..+
T Consensus 226 ~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~------~~~fpi~~v~~kE~~~~g~fry 299 (354)
T KOG0024|consen 226 SPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE------EIQFPIIDVALKEVDLRGSFRY 299 (354)
T ss_pred cHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC------ccccChhhhhhheeeeeeeeee
Confidence 1455666666665 79999999997 579999999999999999887553 4467788889999999998876
Q ss_pred CccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCC-cCcEEEEecC
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDN-IGKKFVRIAG 222 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gk~v~~~~~ 222 (223)
. ...+..+++++++|++... ++..|+++++.+||+.+..++. .-|+++..++
T Consensus 300 ~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 300 C-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred c-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 5 5579999999999988754 7888999999999999998884 3488887653
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.93 E-value=3.6e-24 Score=170.96 Aligned_cols=191 Identities=20% Similarity=0.241 Sum_probs=162.1
Q ss_pred hhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 14 VFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
++++. ..++.|||+++.... +++++|+|+ |++|.+++|+|+..|+ +|+++.+++++.+.++ ++|++.++++++.
T Consensus 150 ~~aa~-~~~~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~ 227 (351)
T cd08233 150 EEAAL-VEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLDPTEV 227 (351)
T ss_pred HHhhh-ccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCcc
Confidence 35544 468899999995444 889999999 9999999999999999 8999999999999998 8999999998887
Q ss_pred ccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 90 TDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 90 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... ...+++..++.+++++.|+....
T Consensus 228 -~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~- 299 (351)
T cd08233 228 -DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSICYT- 299 (351)
T ss_pred -CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEeccC-
Confidence 888899888887 79999999985 688999999999999999997542 22456677788999999886554
Q ss_pred cchHHHHHHHHHHHHHcCCCCc--cceeeeccCCH-HHHHHHhHcCCCc-CcEEE
Q 043295 168 FDLHQDFISMTCDALRAGKIQP--LEDISNGVDSI-PSAFTGFFRGDNI-GKKFV 218 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~-~~a~~~~~~~~~~-gk~v~ 218 (223)
.+.++++++++++|.+++ .++.+++++++ ++|++.+.+++.. ||+||
T Consensus 300 ----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 300 ----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred ----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 466889999999999964 46778999996 7999999999864 89987
No 30
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.93 E-value=3.9e-24 Score=168.87 Aligned_cols=200 Identities=18% Similarity=0.238 Sum_probs=169.0
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.++..+.|||+++.... ++|++|+|+ |.+|++++|+|+..|+++++++.++++.+.++ ++|++.++++++
T Consensus 115 ~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 193 (324)
T cd08292 115 DEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQ 193 (324)
T ss_pred HHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCC
Confidence 4578888889999999986644 899999999 78999999999999999999999999999998 789999998887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. ++.+.+.+.+++ ++|++|||+|+.....++++++++|+++.+|.... ....+++...+.++.++.++....+
T Consensus 194 ~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08292 194 P-GWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRW 267 (324)
T ss_pred c-hHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHh
Confidence 6 788889988887 99999999999888899999999999999986532 1223455556778999998876543
Q ss_pred -----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 168 -----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 168 -----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+....+.+..+++++.+|.+++.+..+++++++.+|++.+.++...||+|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 268 SQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred hhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 2234567888999999999997777789999999999999988888999874
No 31
>PLN02740 Alcohol dehydrogenase-like
Probab=99.93 E-value=5.7e-24 Score=171.39 Aligned_cols=199 Identities=18% Similarity=0.196 Sum_probs=160.4
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.+.. ++|++|+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++|++.++++.
T Consensus 173 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~ 251 (381)
T PLN02740 173 LKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EMGITDFINPK 251 (381)
T ss_pred HHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-HcCCcEEEecc
Confidence 4478888889999999886655 899999999 9999999999999999 6999999999999998 99999999877
Q ss_pred Cc-ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccC-cEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EE-TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLF-GRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+. .++.+.+++.+++++|++||++|+ +.+..++.+++++ |+++.+|..... ....+....+ .++.++.|+..
T Consensus 252 ~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~~-~~~~~i~g~~~ 326 (381)
T PLN02740 252 DSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPMEL-FDGRSITGSVF 326 (381)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ceecccHHHH-hcCCeEEEEec
Confidence 53 147778888776689999999997 6788999999996 999999976431 1112232323 36788888876
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
..+.. ...+.++++++.+|.+++ .++.+|+|+++++|++.+.+++. .|++|..
T Consensus 327 ~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 327 GDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred CCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 54321 345788999999999875 47788999999999999988865 4998863
No 32
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.93 E-value=9.7e-24 Score=169.39 Aligned_cols=198 Identities=22% Similarity=0.239 Sum_probs=157.7
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.+.. ++|++|||+ |++|++++|+|+..|+ +|+++++++++++.++ ++|+++++++.
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~lGa~~~i~~~ 239 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KFGATDCVNPK 239 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCEEEccc
Confidence 4578888889999999986655 899999999 9999999999999999 7999999999999998 99999999887
Q ss_pred Ccc-cHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccC-cEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EET-DLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLF-GRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+.+ ++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... .....+...+. ++..+.|+..
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~ 314 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQLV-TGRVWKGTAF 314 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHHHh-hcCeEEEEEe
Confidence 631 47788888877799999999997 5888999999886 999999976321 11122222232 3456666654
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
..+. ..+.+.++++++.+|.+++. ++++++|+++.+||+.+.+++. .|++++
T Consensus 315 ~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 315 GGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 4321 24567889999999999864 7789999999999999988765 488874
No 33
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.93 E-value=1.1e-23 Score=169.04 Aligned_cols=199 Identities=17% Similarity=0.183 Sum_probs=156.9
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
++++|.+++++.|||+++.+.. ++|++|||+ |++|++++|+|+..|+ +|++++.++++++.++ ++|++.++++.
T Consensus 160 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~ 238 (368)
T TIGR02818 160 LEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KLGATDCVNPN 238 (368)
T ss_pred HHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCeEEccc
Confidence 4578889999999999986655 899999999 9999999999999999 7999999999999998 99999999876
Q ss_pred Cc-ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccC-cEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EE-TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLF-GRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... ....++...+. ++..+.|+..
T Consensus 239 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~ 313 (368)
T TIGR02818 239 DYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQLV-TGRVWRGSAF 313 (368)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHHh-ccceEEEeec
Confidence 42 146677888777789999999996 5788999999886 999999975421 11122333333 3445666654
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
... ..+..+.++++++.+|.+++ .++++|+|+++.+|++.+.+++. .|+++.+
T Consensus 314 ~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 314 GGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred cCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 321 11346788999999999864 47889999999999999988764 5998864
No 34
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.92 E-value=1.7e-23 Score=168.10 Aligned_cols=197 Identities=16% Similarity=0.182 Sum_probs=159.8
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.+.. ++|++|+|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++.
T Consensus 162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~ 240 (369)
T cd08301 162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK-KFGVTEFVNPK 240 (369)
T ss_pred HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEccc
Confidence 4578888889999999887655 899999999 9999999999999999 8999999999999998 89999998876
Q ss_pred Cc-ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccC-cEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EE-TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLF-GRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+. +++.+.+++.+++++|++|||+|+ ..+..++.+++++ |+++.+|..... ....++...++ +++++.|+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~~~~~~-~~~~i~g~~~ 315 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTHPMNLL-NGRTLKGTLF 315 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccCHHHHh-cCCeEEEEec
Confidence 52 156777887777689999999996 4688899999996 999999976531 11233333343 6889998876
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
..+. .+..++++++++.+|.+++. ++.+|||+++.+||+.+.+++.. |+++
T Consensus 316 ~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 316 GGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 5431 23467889999999988653 67889999999999999988865 8876
No 35
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.92 E-value=2e-23 Score=167.30 Aligned_cols=196 Identities=19% Similarity=0.196 Sum_probs=158.1
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
++.++.+++++.|||+++.... +++++|||+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++.+++++
T Consensus 152 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~ 230 (361)
T cd08231 152 DEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EFGADATIDID 230 (361)
T ss_pred HHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCCeEEcCc
Confidence 3467777799999999998877 599999999 9999999999999999 9999999999999998 89999888876
Q ss_pred CcccH---HHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEee
Q 043295 88 EETDL---KATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGF 162 (223)
Q Consensus 88 ~~~~~---~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (223)
+. ++ ...+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... ....++...++.++.++.++
T Consensus 231 ~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 231 EL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred cc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhcccEEEEc
Confidence 54 32 3567788877 99999999986 6788999999999999999865421 12234445668889998888
Q ss_pred eccCccchHHHHHHHHHHHHHcC----CCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 163 LSTDHFDLHQDFISMTCDALRAG----KIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g----~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.... .+.++++++++.++ .+++.++.+++++++.+||+.+.++.. +|+||++
T Consensus 306 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 306 HNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred ccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 7544 34466677777766 344567788999999999999988764 7999863
No 36
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.92 E-value=5.9e-23 Score=164.69 Aligned_cols=197 Identities=17% Similarity=0.200 Sum_probs=157.6
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.... ++|++|+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++|++.++++.
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~~i~~~ 237 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAK-EFGATDFINPK 237 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCcEeccc
Confidence 4588888999999999986655 899999999 9999999999999999 7999999999999998 89999998876
Q ss_pred Cc-ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccC-cEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EE-TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLF-GRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...+. ...++...++. +.++.|+..
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~~-~~~i~g~~~ 311 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----ELSIRPFQLIL-GRTWKGSFF 311 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----ccccCHhHHhh-CCEEEeeec
Confidence 53 145677777776789999999995 6778899999885 999999976431 11233434443 788888776
Q ss_pred cCccchHHHHHHHHHHHHHcCCCC--ccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQ--PLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
..+. .+..+.++++++.+|.++ +.++++|+|+++.+|++.+.+++. .|+++.
T Consensus 312 ~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 312 GGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred CCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 5431 134578899999998765 557888999999999999988874 588863
No 37
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.92 E-value=1.1e-22 Score=160.66 Aligned_cols=201 Identities=24% Similarity=0.297 Sum_probs=167.6
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++++++++.|||..+.... +++++|+|+ |++|.+++|+|+..|++|+++++++++.+.++ ++|++.++++.+
T Consensus 118 ~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 196 (324)
T cd08244 118 LEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTR 196 (324)
T ss_pred HHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCC
Confidence 4578889999999965444333 899999999 89999999999999999999999999999998 899988888887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. ++.+.+...+++ ++|+++||+|+.....++++++++|+++.+|..... ...++....+.+++++.++.....
T Consensus 197 ~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 270 (324)
T cd08244 197 P-DWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRRGVTVVGLLGVQA 270 (324)
T ss_pred c-cHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhCCcEEEEeecccC
Confidence 6 788888888777 899999999998889999999999999999875432 113444566788888888776543
Q ss_pred -cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 168 -FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 168 -~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+....+.+.++++++.++.+.+.+...++++++.+|++.+.++...||+|+++
T Consensus 271 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 271 ERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred CHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 33445678889999999999887778899999999999999998999999864
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.92 E-value=7.9e-23 Score=162.12 Aligned_cols=191 Identities=19% Similarity=0.250 Sum_probs=162.8
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
+++++++++++.|||+++.... +++++|+|+ |++|++++|+|+..|++|+++++++++++.++ ++|+++++++.+.
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~ 217 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE 217 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc
Confidence 3478889999999999997766 899999999 99999999999999999999999999999998 8999999998876
Q ss_pred ccHHHHHHHhCCCCccEEEcCCC-hHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 90 TDLKATLKRYFPDGIDVYFDNVG-GEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 90 ~~~~~~i~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
++.+.+++. +++|+++|+.| +..+...+++++++|+++.+|.... ..+++...++.+++++.++....
T Consensus 218 -~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-- 286 (333)
T cd08296 218 -DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-- 286 (333)
T ss_pred -cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC--
Confidence 677777665 36999999997 5788899999999999999997642 22445566778999999987544
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
...+..++++++++.+++.+ .+++++++.+|++.+.+++..||+|++
T Consensus 287 ---~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ---ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred ---HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 45677888899999998775 578999999999999999999999874
No 39
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.91 E-value=9.8e-23 Score=160.77 Aligned_cols=200 Identities=22% Similarity=0.235 Sum_probs=168.5
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+.+++.++..+.|||+++.... .++++|+|+ |++|++++|+|+..|++++++++++++.+.++ ++|++.++++.
T Consensus 113 ~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 191 (323)
T cd05282 113 DEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSS 191 (323)
T ss_pred HHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEeccc
Confidence 4477888899999999998876 889999999 78999999999999999999999999999998 89999999888
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+. ++...+.+.+++ ++|+++||+|+......+++++++|+++.+|..... ....+...+..++.++.++....
T Consensus 192 ~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05282 192 PE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQ 265 (323)
T ss_pred ch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehH
Confidence 76 788888888877 999999999998778889999999999999875432 12344555555888888877554
Q ss_pred c-----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 167 H-----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 167 ~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+ +....+.+.++++++.+|.+.+.+...++++++.++++.+.+++..||+|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 266 WLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred hhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 3 2344567888999999999988777888999999999999998888999874
No 40
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.91 E-value=6.9e-23 Score=151.42 Aligned_cols=204 Identities=19% Similarity=0.223 Sum_probs=164.3
Q ss_pred chhhhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCC
Q 043295 10 RSCYVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFD 81 (223)
Q Consensus 10 ~~~~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~ 81 (223)
+++. .||++....+|||++|.+.- .+|++|+-. ++||.+.+|+||.+|++-+.++|+....+.+++ .+|++
T Consensus 133 ~pl~-~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~ 211 (354)
T KOG0025|consen 133 IPLA-SAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGAT 211 (354)
T ss_pred CChh-hhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCc
Confidence 5544 89999999999999999887 899998888 899999999999999999999988776655543 58999
Q ss_pred eeeecCCcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEE
Q 043295 82 DAFNYKEETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQ 160 (223)
Q Consensus 82 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
+|+...+- .-.+..+..... .+.+.|||+|+.......+.|..||+++.+|..+. .+.......++.++++++
T Consensus 212 ~ViTeeel-~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~r 285 (354)
T KOG0025|consen 212 EVITEEEL-RDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLR 285 (354)
T ss_pred eEecHHHh-cchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceee
Confidence 99865442 111112222223 78999999999888889999999999999998875 445667788899999999
Q ss_pred eeeccCc------cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCC-CcCcEEEEe
Q 043295 161 GFLSTDH------FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGD-NIGKKFVRI 220 (223)
Q Consensus 161 g~~~~~~------~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~-~~gk~v~~~ 220 (223)
|++...| ++.+.+.+.++.+++++|+|+.+.....+|++...|++...+.. ..||-++.+
T Consensus 286 GfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 286 GFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred eeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 9999888 44556789999999999999998877889999888888766554 346666654
No 41
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.91 E-value=1.8e-22 Score=163.51 Aligned_cols=196 Identities=19% Similarity=0.247 Sum_probs=162.8
Q ss_pred hhhhhccccchhhHHHHHHHH--h--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEI--S--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFN 85 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~--~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~ 85 (223)
+++++.+++++.|||+++... . +++++|+|+ |++|++++|+|+..|++++++++++++.+.++ ++|++.+++
T Consensus 166 ~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~i~ 244 (393)
T cd08246 166 WEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGVIN 244 (393)
T ss_pred HHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEEEc
Confidence 347788999999999998765 3 889999999 89999999999999999999999999999998 899998888
Q ss_pred cCCcc---------------------cHHHHHHHhCCC--CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccc
Q 043295 86 YKEET---------------------DLKATLKRYFPD--GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADAS 142 (223)
Q Consensus 86 ~~~~~---------------------~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 142 (223)
+++.+ .+.+.+.+.+++ ++|++|||+|+..+..++++++++|+++.+|.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~---- 320 (393)
T cd08246 245 RRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY---- 320 (393)
T ss_pred ccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC----
Confidence 64320 245667777775 799999999998889999999999999999865432
Q ss_pred cCCCCchHHHHhhcceEEeeeccCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcC-CCcCcEEEE
Q 043295 143 KRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRG-DNIGKKFVR 219 (223)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~-~~~gk~v~~ 219 (223)
....+...++.++.++.|+.... .+.+..+++++++|.+.+.+..+++++++.+|++.+.++ +..||+|+-
T Consensus 321 -~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 321 -NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred -CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 12345566677888888876554 456788999999999988777889999999999999998 788999874
No 42
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.91 E-value=7.6e-23 Score=162.42 Aligned_cols=197 Identities=25% Similarity=0.250 Sum_probs=161.9
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHh-hCCCeeeec
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEK-LGFDDAFNY 86 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~-~g~~~~~~~ 86 (223)
..+++++..++.|+|++..... .++.+|+|+ |++|++++|+++..|+ +|++++.+++|+++++ + .|++.+++.
T Consensus 143 ~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~-~~~g~~~~~~~ 221 (350)
T COG1063 143 DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAK-EAGGADVVVNP 221 (350)
T ss_pred ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HhCCCeEeecC
Confidence 4588999999999988744443 666699999 9999999999999998 8999999999999999 6 666767666
Q ss_pred CCcccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 87 KEETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 87 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
.+. +....+.+.+++ |+|++|||+|. ..+..++++++++|+++.+|.+.... ...+...++.+++++.|+..
T Consensus 222 ~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~l~gs~~ 295 (350)
T COG1063 222 SED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELTLRGSLR 295 (350)
T ss_pred ccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccEEEeccC
Confidence 554 677788889988 99999999997 46899999999999999999876531 14567788999999999843
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCC-cCcEEEEe
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDN-IGKKFVRI 220 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gk~v~~~ 220 (223)
.. ....++.+++++.+|++++. ++..++++++++|++.+.+++. ..|+++.+
T Consensus 296 ~~----~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 296 PS----GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CC----CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 22 14568889999999999976 4566789999999999998664 45888763
No 43
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.91 E-value=2.4e-22 Score=159.05 Aligned_cols=202 Identities=46% Similarity=0.729 Sum_probs=163.7
Q ss_pred hhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh-hCCCeeeecCC
Q 043295 15 FANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK-LGFDDAFNYKE 88 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 88 (223)
.++++++++.|||+++.... .++++|+|+ |++|++++|+|+..|++|+++++++++.+.++ + +|++.++++++
T Consensus 122 ~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~~g~~~~~~~~~ 200 (329)
T cd05288 122 YLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV-EELGFDAAINYKT 200 (329)
T ss_pred HHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hhcCCceEEecCC
Confidence 33448999999999997766 889999999 79999999999999999999999999999998 6 99999998887
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
. ++.+.+.+.+++++|+++||+|+..+..++++++++|+++.+|.............++....+.++.++.++......
T Consensus 201 ~-~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (329)
T cd05288 201 P-DLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA 279 (329)
T ss_pred h-hHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH
Confidence 6 777888877756899999999998899999999999999999865432110000023355667788888887654433
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
....+.+.++++++.+|.+++....+++++++.++++.+.+++..||+|+
T Consensus 280 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 280 DRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 23356788899999999998776667899999999999998888888874
No 44
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.91 E-value=1.9e-22 Score=161.95 Aligned_cols=197 Identities=25% Similarity=0.320 Sum_probs=165.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+.++++++.+++|||+++.... .++++|+|+ |++|.+++|+|+..|++ |+++..++++.+.++ ++|++.+++++
T Consensus 162 ~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~-~~g~~~v~~~~ 240 (367)
T cd08263 162 YTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAA 240 (367)
T ss_pred HHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCceEecCC
Confidence 4588999999999999998776 889999999 99999999999999997 999988999999998 89999999988
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChH-HHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
+. ++.+.++...++ ++|+++|++++. ....++++++++|+++.+|..... .....+...++.++.++.++...
T Consensus 241 ~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 241 KE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred cc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHhhCCeEEEecCCC
Confidence 76 788888888766 899999999986 889999999999999999865431 12234555555788888775322
Q ss_pred CccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
. ..+.++.+++++++|.+++. +...++++++.++++.+.+++..||+|++
T Consensus 316 ~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 R----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred C----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 2 14678889999999999874 56678999999999999998888999974
No 45
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.91 E-value=3.4e-22 Score=159.51 Aligned_cols=194 Identities=19% Similarity=0.230 Sum_probs=162.3
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+.+++++++.+.|||+++.... .++++|+|+ |++|.+++|+|+..|+ +|++++.++++.+.++ ++|++.+++++
T Consensus 150 ~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 228 (350)
T cd08240 150 PALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVNGS 228 (350)
T ss_pred HHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEecCC
Confidence 4478889999999999998877 589999999 9999999999999999 7999998999999998 89998888887
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+. ++.+.+.+..++++|++||++|+ ..+..++++|+++|+++.+|..... ...+......++.++.++....
T Consensus 229 ~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~ 301 (350)
T cd08240 229 DP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGS 301 (350)
T ss_pred Cc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCC
Confidence 65 67777777666589999999984 6889999999999999999875432 1223333444778887766554
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+.+.++++++++|.+++.....++++++.++++.+.+++..||++++
T Consensus 302 -----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 302 -----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred -----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 466888999999999987777788999999999999998888999985
No 46
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.91 E-value=4e-22 Score=158.50 Aligned_cols=192 Identities=21% Similarity=0.249 Sum_probs=161.9
Q ss_pred hhhhhccccchhhHHHHHHHH-h--hCCCEEEEE--CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCCCeeeec
Q 043295 13 YVFANGAGTSGFTAYVGFYEI-S--QKGEKVFVS--GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGFDDAFNY 86 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~-~--~~g~~vlI~--g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (223)
++++++++..+.|||+++... . .++++|+|+ |++|.+++|+|+..| ++|+++.+++++.+.++ ++|+++++++
T Consensus 141 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 219 (340)
T cd05284 141 PVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNA 219 (340)
T ss_pred HHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcC
Confidence 558999999999999999886 3 789999999 789999999999999 79999999999999998 8999999988
Q ss_pred CCcccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 87 KEETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 87 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
++ .+.+.+++.+++ ++|+++||+|+ .....++++++++|+++.+|.... ...+....+.+++++.++..
T Consensus 220 ~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 220 SD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred Cc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEec
Confidence 76 377788888776 89999999996 788999999999999999986542 12334444578888887765
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.. .+.+..+++++++|.+++. ...++++++.+|++.+.+++..||+|+.+
T Consensus 291 ~~-----~~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 291 GT-----RAELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred cc-----HHHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 43 5668889999999999874 45789999999999999999899999753
No 47
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.91 E-value=3.7e-22 Score=159.27 Aligned_cols=193 Identities=22% Similarity=0.240 Sum_probs=158.6
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+.+++++++++.|||+++.... +++++|+|+ |++|++++|+|+..|++|++++.++ +.+.++ ++|++.+++...
T Consensus 153 ~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~ 230 (350)
T cd08274 153 DVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDA 230 (350)
T ss_pred HHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCC
Confidence 4578889999999999985444 899999999 8999999999999999999998665 788887 899976665544
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. ...+ ...+++ ++|++|||+|++.+..++++++++|+++.+|.... ....++...++.++.++.++....
T Consensus 231 ~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~- 301 (350)
T cd08274 231 P-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT- 301 (350)
T ss_pred c-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-
Confidence 3 3333 445555 89999999999889999999999999999986532 113455667778888988877654
Q ss_pred cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 168 FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.+.+.++++++.+|.+++.+..+++++++.++++.+.++...||+|+++
T Consensus 302 ----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 302 ----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred ----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 5678889999999999887778889999999999999888889999863
No 48
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.90 E-value=2.7e-22 Score=161.77 Aligned_cols=199 Identities=16% Similarity=0.150 Sum_probs=151.5
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeE-EEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYV-VGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
.++++..++.|+|+++.... +++++|+|. |++|++++|+|+..|+++ ++++.++++++.++ ++|++. +++....
T Consensus 163 ~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~-~~Ga~~-v~~~~~~ 240 (393)
T TIGR02819 163 DLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR-SFGCET-VDLSKDA 240 (393)
T ss_pred ceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HcCCeE-EecCCcc
Confidence 46778888999999997655 899999999 999999999999999964 45567788999999 899974 5543321
Q ss_pred cHHHHHHHhCCC-CccEEEcCCChH---------------HHHHHHHhhccCcEEEEEcccccccc-c------ccCCCC
Q 043295 91 DLKATLKRYFPD-GIDVYFDNVGGE---------------MLEAAVANMNLFGRVAACGVISECAD-A------SKRAVP 147 (223)
Q Consensus 91 ~~~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~-~------~~~~~~ 147 (223)
++.+.+.+.+++ ++|++|||+|.+ .+..++++++++|+++.+|....... . ....++
T Consensus 241 ~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i 320 (393)
T TIGR02819 241 TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSI 320 (393)
T ss_pred cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccccccccc
Confidence 677788888877 899999999963 79999999999999999998632110 0 001223
Q ss_pred chHHHHhhcceEEeeeccCccchHHHHHHHHHHHHHcCCCCcc--ce-eeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 148 NMIDIVYKRIKIQGFLSTDHFDLHQDFISMTCDALRAGKIQPL--ED-ISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~-~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
.....+.++.++.|..... .++..++++++.+|++++. ++ ++|||+++.+||+.+.+++. +|+++.++
T Consensus 321 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 321 RFGLGWAKSHSFHTGQTPV-----MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDPH 391 (393)
T ss_pred chHHhhccCceEEeccCCh-----hhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence 3444555666666632221 3445679999999999864 44 67999999999999988754 79999864
No 49
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.90 E-value=6.9e-22 Score=160.25 Aligned_cols=198 Identities=19% Similarity=0.244 Sum_probs=163.0
Q ss_pred hhhhhccccchhhHHHHHHHH--h--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEI--S--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFN 85 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~--~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~ 85 (223)
+++++.++.++.|||+++... . .++++++|+ |++|++++|+|+..|+++++++.++++.+.++ ++|++.++|
T Consensus 162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~v~ 240 (398)
T TIGR01751 162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAVID 240 (398)
T ss_pred HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEEec
Confidence 347788889999999998762 2 889999999 89999999999999999998888999999999 799999988
Q ss_pred cCCc---------------------ccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEccccccccccc
Q 043295 86 YKEE---------------------TDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASK 143 (223)
Q Consensus 86 ~~~~---------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 143 (223)
+++. ..+.+.+.+.+++ ++|++|||+|+..+..++++++++|+++.+|......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~---- 316 (398)
T TIGR01751 241 RNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYN---- 316 (398)
T ss_pred CCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCC----
Confidence 7542 0245567777776 8999999999888889999999999999998765421
Q ss_pred CCCCchHHHHhhcceEEeeeccCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 144 RAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
...+...++.++.++.++.... .+.++++++++.++.+.+.+..+++++++.++++.+.+++..||+|+++.
T Consensus 317 -~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 317 -HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred -CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 2334555666777777766544 34467899999999999888888999999999999999999999999874
No 50
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.90 E-value=9.9e-22 Score=156.32 Aligned_cols=195 Identities=23% Similarity=0.283 Sum_probs=164.4
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+.++++++..+.|||+++.... +++++++|+ +++|.+++|+|+..|++|+++++++++.+.++ ++|++.++++.+
T Consensus 141 ~~~~a~l~~~~~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~ 219 (341)
T cd08297 141 FEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKK 219 (341)
T ss_pred HHHHHHHHcchHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCC
Confidence 3478889999999999997766 899999999 56999999999999999999999999999997 899999998887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCC-hHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVG-GEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. ++.+.+.+.+++ ++|+++|+.+ +.....++++++++|+++.+|..... ....+...+..++.++.+.....
T Consensus 220 ~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 293 (341)
T cd08297 220 S-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVLRGITIVGSLVGT 293 (341)
T ss_pred c-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHhcccEEEEeccCC
Confidence 6 788888888866 9999999766 57888999999999999999865421 12345556667888888755443
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.+.++.++++++++.+++.+ ..++++++.++++.+..+...||+|+++
T Consensus 294 -----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 294 -----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred -----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 56788899999999998755 5689999999999999999999999874
No 51
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.90 E-value=1.1e-21 Score=155.47 Aligned_cols=204 Identities=22% Similarity=0.296 Sum_probs=167.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+.+++.++.++.|||+++.... +++++|+|+ |++|++++|+|+..|++++.+..++++.+.++ ++|++.++++.
T Consensus 115 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 193 (334)
T PTZ00354 115 FEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYP 193 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecC
Confidence 3477889999999999998866 899999999 89999999999999999888898999999998 89998888887
Q ss_pred Cccc-HHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 88 EETD-LKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 88 ~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
.. + +.+.+++.+++ ++|+++||+|++.+..++++++++|+++.+|...... ...++...++.++.++.++...
T Consensus 194 ~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 268 (334)
T PTZ00354 194 DE-EGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAK----VEKFNLLPLLRKRASIIFSTLR 268 (334)
T ss_pred Ch-hHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCc----ccccCHHHHHhhCCEEEeeecc
Confidence 65 4 77888888876 9999999999988999999999999999998643321 1114555566677788776544
Q ss_pred Cc-----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEecC
Q 043295 166 DH-----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIAG 222 (223)
Q Consensus 166 ~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~~ 222 (223)
.. +....+.++.+++++.+|.+.+.+...++++++.++++.+.++...||+|+.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 269 SRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 31 1122355677889999999988777788999999999999988888999998854
No 52
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.90 E-value=4.4e-22 Score=158.95 Aligned_cols=198 Identities=18% Similarity=0.187 Sum_probs=156.0
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.++.++.|||+++.... +++++|||+ |++|++++|+|+..|+ .|+++++++++.+.++ ++|++.++++.+
T Consensus 142 ~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~ 220 (351)
T cd08285 142 DEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDYKN 220 (351)
T ss_pred HHHhhhhccchhhHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecCCC
Confidence 4478888899999999975555 899999999 9999999999999999 6899998999999998 899999999887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCch--HHHHhhcceEEeeec
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNM--IDIVYKRIKIQGFLS 164 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 164 (223)
. ++.+.+.+.+++ ++|+++||+|+ +.+..++++++++|+++.+|..... ....++. .....+..++.+...
T Consensus 221 ~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~ 295 (351)
T cd08285 221 G-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHKTINGGLC 295 (351)
T ss_pred C-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhccccEEEEeec
Confidence 6 788888888776 89999999996 5789999999999999999875531 1112221 112234445554332
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCcc---ceeeeccCCHHHHHHHhHcCC-CcCcEEEEe
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPL---EDISNGVDSIPSAFTGFFRGD-NIGKKFVRI 220 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~---~~~~~~l~~~~~a~~~~~~~~-~~gk~v~~~ 220 (223)
.. ..+.++++++++.+|.+++. ...+++++++.+|++.+.+++ ..+|+++++
T Consensus 296 ~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 296 PG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 11 13567889999999999982 334579999999999999987 468999864
No 53
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.90 E-value=1.5e-21 Score=155.46 Aligned_cols=197 Identities=22% Similarity=0.261 Sum_probs=163.8
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
.++++.++.++.|||+++.... .++++|+|+ |++|.+++|+|+..|++|+++..++++.+.++ ++|++.++++++
T Consensus 140 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~ 218 (345)
T cd08260 140 FVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASE 218 (345)
T ss_pred HHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEcccc
Confidence 3478888999999999987665 889999999 99999999999999999999999999999998 899999998886
Q ss_pred -cccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 -ETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 -~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. ++...+....++++|++|||+|+ ..+...+++++++|+++.+|...... .....++..++.+++++.++....
T Consensus 219 ~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 294 (345)
T cd08260 219 VE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVGSHGMP 294 (345)
T ss_pred ch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEeCCcCC
Confidence 5 67777777766689999999995 67889999999999999998755321 012344555667888888866543
Q ss_pred ccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+.++.+++++++|.+.+. +...++++++++|++.+.++...||+|++
T Consensus 295 -----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 295 -----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 5678889999999998864 46678999999999999999999998864
No 54
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.90 E-value=1.2e-21 Score=155.86 Aligned_cols=202 Identities=21% Similarity=0.219 Sum_probs=164.4
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH----HHHHHHHHhhCCCee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN----EKVAILKEKLGFDDA 83 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~----~~~~~~~~~~g~~~~ 83 (223)
+++++++++++.|||+++.... +++++|+|+ |++|++++|+|+..|++|+++++++ ++.+.++ ++|++.+
T Consensus 121 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~ 199 (341)
T cd08290 121 PEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHV 199 (341)
T ss_pred HHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEE
Confidence 4588889999999999998765 899999999 8999999999999999999999776 5678887 8999999
Q ss_pred eecCCc--ccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEe
Q 043295 84 FNYKEE--TDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQG 161 (223)
Q Consensus 84 ~~~~~~--~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (223)
+++++. .++...++...++++|++|||+|+......+++++++|+++.+|..... ....+...++.++.++.+
T Consensus 200 ~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~ 274 (341)
T cd08290 200 LTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRG 274 (341)
T ss_pred EeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEE
Confidence 887652 1466667766655899999999998888899999999999999864431 123445566788999988
Q ss_pred eeccCc-----cchHHHHHHHHHHHHHcCCCCccceeee---ccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 162 FLSTDH-----FDLHQDFISMTCDALRAGKIQPLEDISN---GVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 162 ~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+..... +......+..+++++.+|.+.+....++ +++++.++++.+.++...||+|+.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 275 FWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred EecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 775432 2334457888999999999988766677 9999999999999988899999863
No 55
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.90 E-value=5.2e-22 Score=158.70 Aligned_cols=189 Identities=16% Similarity=0.136 Sum_probs=144.1
Q ss_pred hhhccccchhhHHHHHHHHh--------hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEec---CHHHHHHHHHhhCCC
Q 043295 15 FANGAGTSGFTAYVGFYEIS--------QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAG---TNEKVAILKEKLGFD 81 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~--------~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~---~~~~~~~~~~~~g~~ 81 (223)
+++++..++.++++++.... +++++|+|+ |++|++++|+|+..|++|+++++ ++++++.++ ++|++
T Consensus 143 ~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~ 221 (355)
T cd08230 143 DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGAT 221 (355)
T ss_pred cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCE
Confidence 45666677777666554321 589999999 99999999999999999999987 678999998 99998
Q ss_pred eeeecCCcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCc----hHHHHhhc
Q 043295 82 DAFNYKEETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPN----MIDIVYKR 156 (223)
Q Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~ 156 (223)
. +++.+. ++.+ .+ ..+++|++|||+|+ ..+..++++++++|+++.+|...+. ....++ ...++.++
T Consensus 222 ~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~k~ 292 (355)
T cd08230 222 Y-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNRDLVLGN 292 (355)
T ss_pred E-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhhhHhhcC
Confidence 6 466554 4443 21 22489999999997 4788999999999999999976541 111222 34667799
Q ss_pred ceEEeeeccCccchHHHHHHHHHHHHHcCC------CCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 157 IKIQGFLSTDHFDLHQDFISMTCDALRAGK------IQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~------i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+++.|+.... .+.++++++++.++. +++.++.+++++++.+||+.+.++. +|+|+++
T Consensus 293 ~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 293 KALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred cEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 9999986554 345677788887765 6667888999999999999887554 5999875
No 56
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.90 E-value=1.2e-21 Score=159.38 Aligned_cols=177 Identities=23% Similarity=0.245 Sum_probs=144.5
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCC---eEEEEecCHHHHHHHHHhh--------CCC-eeeecCCcccHHHHHHHh
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGC---YVVGSAGTNEKVAILKEKL--------GFD-DAFNYKEETDLKATLKRY 99 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~---~v~~~~~~~~~~~~~~~~~--------g~~-~~~~~~~~~~~~~~i~~~ 99 (223)
++|++|+|+ |++|++++|+|+..|+ +|++++.++++++.++ ++ |++ .++++.+.+++.+.+++.
T Consensus 174 ~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~ 252 (410)
T cd08238 174 KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATIDDLHATLMEL 252 (410)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-HhccccccccCceEEEECCCccccHHHHHHHH
Confidence 889999999 8999999999999864 7999999999999999 76 665 567765422688888888
Q ss_pred CCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHHHHHH
Q 043295 100 FPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFISM 177 (223)
Q Consensus 100 ~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (223)
+++ ++|++||++|+ +.+..++++++++|+++.++..... .....+++..++.+++++.|+.... ...+++
T Consensus 253 t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~ 324 (410)
T cd08238 253 TGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPLNFYNVHYNNTHYVGTSGGN-----TDDMKE 324 (410)
T ss_pred hCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---CccccccHHHhhhcCcEEEEeCCCC-----HHHHHH
Confidence 887 99999999985 7889999999999988876542211 0123456677888999999977544 456888
Q ss_pred HHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 178 TCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 178 ~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
+++++.+|++++ .++.+|+|+++.+|++.+. ++..||+|+.++
T Consensus 325 ~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 325 AIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred HHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 999999999998 4788899999999999999 777899999873
No 57
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.90 E-value=2.6e-21 Score=153.43 Aligned_cols=196 Identities=21% Similarity=0.349 Sum_probs=168.4
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+.+++.++.++.+||+++.... +++++|+|+ |++|.+++++|+..|++|+++++++++.+.++ ++|.+.++++..
T Consensus 135 ~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 213 (336)
T cd08276 135 FEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRT 213 (336)
T ss_pred HHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCc
Confidence 3477888889999999998776 899999999 89999999999999999999999999999998 789999988776
Q ss_pred -cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 -ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 -~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. ++.+.+++.+++ ++|+++|++++.....++.+++++|+++.+|..... ....+...++.++.++.++....
T Consensus 214 ~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 214 TP-DWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred cc-CHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc
Confidence 4 688888888887 999999999988899999999999999999875542 11345567788999999887654
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.+.+.++++++.++.+.+.....++++++.++++.+.++...+|+++++
T Consensus 288 -----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 -----RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred -----HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 5678888999999998877777889999999999999888889999863
No 58
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.90 E-value=1.3e-21 Score=154.57 Aligned_cols=200 Identities=22% Similarity=0.305 Sum_probs=153.6
Q ss_pred hhhhhccccchhhHHHHHHHHh-----hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-----QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAF 84 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-----~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~ 84 (223)
+++++.+++++.|||+++.... .++++|+|+ |++|.+++|+|+..|++|+++++++++.+.++ ++|++.++
T Consensus 118 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~ 196 (326)
T cd08289 118 LKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVI 196 (326)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEE
Confidence 4578889999999999886543 357899999 89999999999999999999999999999998 89998888
Q ss_pred ecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 85 NYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
++++. ..+.++...++++|+++||+|+..+...+++++++|+++.+|..... ..+.++..++.++.++.++..
T Consensus 197 ~~~~~--~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T cd08289 197 PREEL--QEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGG-----EVETTVFPFILRGVNLLGIDS 269 (326)
T ss_pred cchhH--HHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCC-----CCCcchhhhhhccceEEEEEe
Confidence 87653 34556666444899999999998899999999999999999976321 123335556688899888754
Q ss_pred cCc-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDH-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
... .....+.+..+.+.+..+.+.+.+..+++++++.+||+.+.+++..||+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 270 VECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 321 11223344444444433333445677889999999999999999999999864
No 59
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.89 E-value=3e-21 Score=151.98 Aligned_cols=196 Identities=21% Similarity=0.239 Sum_probs=158.1
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
++++++++.++.|||+++.... +++++|+|+ |++|.+++|+|+..|++|++++.++++.+.++ ++|++.+++.
T Consensus 117 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~- 194 (320)
T cd08243 117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID- 194 (320)
T ss_pred HHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-
Confidence 4478999999999999998876 889999999 89999999999999999999999999999998 8999888754
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHH--HHhhcceEEeeecc
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMID--IVYKRIKIQGFLST 165 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~ 165 (223)
.. ++.+.+++. ++++|+++||+|+..+...+++++++|+++.+|...... ......... .+.++.++.++...
T Consensus 195 ~~-~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (320)
T cd08243 195 DG-AIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQW---TLEDFNPMDDIPSGVNLTLTGSSSG 269 (320)
T ss_pred Cc-cHHHHHHHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCc---ccCCcchhhhhhhccceEEEecchh
Confidence 43 677778777 458999999999988999999999999999999754321 000111122 23566666665543
Q ss_pred CccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
.. ....++.+++++.++.+++.+...++++++.+|++.+.++...||+|+
T Consensus 270 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 270 DV---PQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hh---hHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 21 235678899999999998877778899999999999999888899886
No 60
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.89 E-value=2.4e-21 Score=155.36 Aligned_cols=198 Identities=24% Similarity=0.305 Sum_probs=162.3
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
++.++.+++++.|||+++.... +++++|+|+ |++|.+++|+|+..|+ +|++++.++++.+.++ ++|++.++++.
T Consensus 161 ~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~-~~g~~~~i~~~ 239 (365)
T cd08278 161 LELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAK-ELGATHVINPK 239 (365)
T ss_pred HHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCcEEecCC
Confidence 4578999999999999987765 889999999 9999999999999999 6999999999999888 89999999988
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|..... .....+...++.++.++.++....
T Consensus 240 ~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 240 EE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred Cc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccCHHHHhhcCceEEEeecCC
Confidence 76 78888888774499999999985 6789999999999999999975321 122455666667888888776533
Q ss_pred ccchHHHHHHHHHHHHHcCCCCc-cceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQP-LEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~-~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
. ...+.++++++++++|.+++ .+...++++++.+|++.+.+++.. |+|++
T Consensus 315 ~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 315 S--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred c--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 1 12466788999999999865 345578999999999999887765 88774
No 61
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.89 E-value=3.3e-21 Score=152.99 Aligned_cols=193 Identities=24% Similarity=0.346 Sum_probs=161.9
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.++.++.|||+++.... +++++|||. |++|.+++|+|+..|++|++++.++++.+.++ ++|.+.++++.+
T Consensus 140 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~ 218 (338)
T cd08254 140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLD 218 (338)
T ss_pred HHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCC
Confidence 4478889999999999998776 889999999 88999999999999999999999999999998 899988888776
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. .+.+.+ ...++ ++|+++||+|. +.+..++++|+++|+++.+|.... ....+...++.++.++.++....
T Consensus 219 ~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 290 (338)
T cd08254 219 D-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGGT 290 (338)
T ss_pred c-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccCC
Confidence 5 666666 44454 89999999985 688999999999999999986432 12344566777888888765443
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.+.+..+++++++|.+++. ...++++++.++++.+.+++..||+|+++
T Consensus 291 -----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 291 -----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 5678889999999999877 56789999999999999999999999874
No 62
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.89 E-value=4.2e-21 Score=150.84 Aligned_cols=200 Identities=21% Similarity=0.263 Sum_probs=165.3
Q ss_pred hhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 14 VFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
.++++++..+.++|+++.... +++++|+|+ |++|.+++++++..|++|++++.++++.+.++ ++|++.+++..+
T Consensus 112 ~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 190 (320)
T cd05286 112 ETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRD 190 (320)
T ss_pred HHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCc
Confidence 467788999999999998766 889999999 89999999999999999999999999999998 899988888776
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. ++.+.++..+++ ++|+++||+++......+++++++|+++.+|..... ....+...+..+++++.++....+
T Consensus 191 ~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 191 E-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred h-hHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhh
Confidence 5 788888888876 899999999998888999999999999999865431 112334444477888776553322
Q ss_pred ---cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 168 ---FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 168 ---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+....+.+..+++++.++.+.+.....++++++.++++.+.++...+|+|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 33445667789999999999877777889999999999999988889999863
No 63
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.89 E-value=3.8e-21 Score=152.71 Aligned_cols=194 Identities=24% Similarity=0.270 Sum_probs=158.5
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
+++++.+ ..+.|+++++.... +++++|||+ |.+|.+++|+|+..|++|+++..++++.+.++ ++|+++++++.+.
T Consensus 136 ~~~aa~~-~~~~~a~~~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~ 213 (337)
T cd08261 136 LDQAALV-EPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE 213 (337)
T ss_pred HHHhhhh-chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc
Confidence 3456555 67788998883333 899999999 88999999999999999999998999999998 8999999998886
Q ss_pred ccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 90 TDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 90 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|.... ....+...+..+++++.+....
T Consensus 214 -~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-- 284 (337)
T cd08261 214 -DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSRNA-- 284 (337)
T ss_pred -CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEeccC--
Confidence 788888888877 89999999986 678899999999999999986542 1133444556677777765322
Q ss_pred cchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcC-CCcCcEEEEe
Q 043295 168 FDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRG-DNIGKKFVRI 220 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~-~~~gk~v~~~ 220 (223)
..+.++.+++++++|.+++ .+..+++++++.++++.+.++ ...+|+|+++
T Consensus 285 ---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 285 ---TREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred ---ChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 2567888999999999998 666788999999999999988 4789999875
No 64
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.89 E-value=7.9e-22 Score=152.71 Aligned_cols=175 Identities=17% Similarity=0.212 Sum_probs=142.6
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.+++++.|||+++.+.. .++++|+|+ |++|++++|+|+..|++ |++++.++++++.++ ++|++.++++.+
T Consensus 96 ~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~ 174 (280)
T TIGR03366 96 DAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELAL-SFGATALAEPEV 174 (280)
T ss_pred HHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCcEecCchh
Confidence 4578888889999999998777 899999999 99999999999999996 999988999999999 999999887643
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
..+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... ...++++..++.+++++.|+....
T Consensus 175 ---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~i~~~~~~~~~~~i~g~~~~~ 247 (280)
T TIGR03366 175 ---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVALDPEQVVRRWLTIRGVHNYE 247 (280)
T ss_pred ---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----CceeeCHHHHHhCCcEEEecCCCC
Confidence 34566667766 89999999986 5688999999999999999965321 122456778888999999987654
Q ss_pred ccchHHHHHHHHHHHHHcC--CCC--ccceeeeccCCH
Q 043295 167 HFDLHQDFISMTCDALRAG--KIQ--PLEDISNGVDSI 200 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g--~i~--~~~~~~~~l~~~ 200 (223)
.+.++++++++.++ .++ +.++++|||+++
T Consensus 248 -----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 248 -----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred -----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 46688899999875 444 447778888763
No 65
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.89 E-value=3.2e-21 Score=152.64 Aligned_cols=203 Identities=33% Similarity=0.536 Sum_probs=163.3
Q ss_pred hhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 14 VFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
.++++++.++.|||+++.+.. +++++++|+ |++|.+++|+|+..|++|+++++++++.+.++ ++|++.+++..+
T Consensus 115 ~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~ 193 (329)
T cd08250 115 PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKT 193 (329)
T ss_pred chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCC
Confidence 367889999999999998776 899999999 89999999999999999999999999999998 899988888776
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccc-----cCCCCchHHHHhhcceEEeee
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADAS-----KRAVPNMIDIVYKRIKIQGFL 163 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~ 163 (223)
. ++.+.+.+..++++|+++|++|+..+...+++++++|+++.+|......... ....+ ....+.++.++.++.
T Consensus 194 ~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 271 (329)
T cd08250 194 E-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFF 271 (329)
T ss_pred c-cHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEE
Confidence 5 6777777665558999999999988999999999999999998764321000 00111 234567888888877
Q ss_pred ccCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 164 STDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
...+.....+.+..+++++.+|.+.+. ....++++++.+|++.+.++...||+|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 272 LPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 654323346678889999999999874 33457999999999999988888999874
No 66
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.89 E-value=4.4e-21 Score=151.71 Aligned_cols=200 Identities=19% Similarity=0.184 Sum_probs=157.3
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.++..+.|||+++.... +++++++|+ |.+|++++|+|+..|++|+++++++++.+.++ ++|++.+++..
T Consensus 115 ~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 193 (327)
T PRK10754 115 FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYR 193 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCC
Confidence 4477788889999999987766 899999999 89999999999999999999999999999998 89998888887
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceE-Eeeecc
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKI-QGFLST 165 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 165 (223)
+. ++.+.++..+++ ++|+++||+|+......+.+++++|+++.+|..... ....+...+..++... ......
T Consensus 194 ~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 267 (327)
T PRK10754 194 EE-NIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQ 267 (327)
T ss_pred CC-cHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceee
Confidence 76 788889988887 999999999998888999999999999999876421 1122222222222111 111111
Q ss_pred Cc---cchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 166 DH---FDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 166 ~~---~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+ +....+.+..+++++.+|.+++. ...+++++++.++++.+.++...||+|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 268 GYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 11 22334567778999999999864 45788999999999999999889999986
No 67
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.89 E-value=5.3e-21 Score=151.94 Aligned_cols=195 Identities=22% Similarity=0.269 Sum_probs=158.0
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHH-cCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKL-GGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~-~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+.++++++.++.|||+++.... +++++|+|+ |++|.+++|+|+. .|++|+++++++++++.++ ++|++.++++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~ 216 (338)
T PRK09422 138 PAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKR 216 (338)
T ss_pred HHHeehhhcchhHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccc
Confidence 4588899999999999984444 899999999 9999999999998 4999999999999999998 899999998864
Q ss_pred cccHHHHHHHhCCCCcc-EEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPDGID-VYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
..++.+.+++.++ ++| +++++.+++.+..++++++++|+++.+|.... ...++......+..++.++....
T Consensus 217 ~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~- 288 (338)
T PRK09422 217 VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSLVGT- 288 (338)
T ss_pred cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEecCCC-
Confidence 2266777877766 688 55666667889999999999999999986532 12334555666777776654333
Q ss_pred cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 168 FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
.+.++.+++++++|.+.+.+. .++++++.+|++.+.++...||+|+.+.
T Consensus 289 ----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 289 ----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred ----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 456888999999999987654 5799999999999999999999999763
No 68
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.89 E-value=4.6e-21 Score=152.63 Aligned_cols=193 Identities=19% Similarity=0.186 Sum_probs=158.3
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
++++++++.++.|||+++.... +++++|+|+ |++|.+++|+|+..|+ +|++++.++++.+.++ ++|+. .++++.
T Consensus 143 ~~~a~~l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~ 220 (344)
T cd08284 143 DEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PINFED 220 (344)
T ss_pred HHHhhhhcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EEecCC
Confidence 4588889999999999997755 889999999 9999999999999997 8999988888888888 89975 466666
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. ++...+.+.+++ ++|++|||+|+ ......+++++++|+++.+|..... .........+.+++++.+....
T Consensus 221 ~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~- 293 (344)
T cd08284 221 A-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFGRCP- 293 (344)
T ss_pred c-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEecCC-
Confidence 5 788888888876 99999999996 6788999999999999999976532 1223445667788887654211
Q ss_pred ccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
..+.++++++++.++.+++. +..+++++++.++++.+.+++. ||+|++
T Consensus 294 ----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 294 ----VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred ----cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 25678889999999999863 5677899999999999988777 999985
No 69
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.89 E-value=8.9e-22 Score=154.35 Aligned_cols=175 Identities=11% Similarity=0.101 Sum_probs=136.1
Q ss_pred ccchhhHHHHHHHHhhCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHH
Q 043295 20 GTSGFTAYVGFYEISQKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATL 96 (223)
Q Consensus 20 ~~~~~ta~~~l~~~~~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 96 (223)
..++.|||+++.+...++++++|+ |++|++++|+|+.+|++ |++++.++++++.+. .+ .++|+.+ .
T Consensus 128 ~~~~~~a~~~~~~~~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~----- 196 (308)
T TIGR01202 128 LALAATARHAVAGAEVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D----- 196 (308)
T ss_pred hhHHHHHHHHHHhcccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c-----
Confidence 345789999997644568899999 99999999999999996 556666666766555 32 4454422 1
Q ss_pred HHhCCCCccEEEcCCChH-HHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHHHH
Q 043295 97 KRYFPDGIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFI 175 (223)
Q Consensus 97 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (223)
.++++|++|||+|+. .+..++++++++|+++.+|.... ...+++..++.+++++.++.... .+.+
T Consensus 197 ---~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~ 262 (308)
T TIGR01202 197 ---PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDL 262 (308)
T ss_pred ---cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHH
Confidence 123799999999984 68999999999999999997542 12345556777888888766544 5678
Q ss_pred HHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 176 SMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 176 ~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+++++++++|.+++. ++.++||+++.+||+.+.++...+|++++
T Consensus 263 ~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 263 HAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 999999999999864 78889999999999998877777899874
No 70
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.89 E-value=2.6e-21 Score=153.64 Aligned_cols=189 Identities=21% Similarity=0.204 Sum_probs=158.3
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
+++++.+++.+.|||+++.+.. +++++++|. |++|++++|+|+..|++|+++++++++.+.++ ++|++.+++....
T Consensus 145 ~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~ 223 (337)
T cd05283 145 SAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATKDP 223 (337)
T ss_pred HHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCcch
Confidence 3478889999999999998777 899999999 99999999999999999999999999999998 8999988877654
Q ss_pred ccHHHHHHHhCCCCccEEEcCCChH-HHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 90 TDLKATLKRYFPDGIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 90 ~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
++... .++++|+++||+|+. ....++++++++|+++.+|..... ..+++..++.++.++.++....
T Consensus 224 -~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-- 290 (337)
T cd05283 224 -EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG-- 290 (337)
T ss_pred -hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC--
Confidence 33221 234899999999986 588999999999999999875431 1345566677899999887665
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+.++.+++++++|.+++.+ ..++++++.+||+.+.+++..||+|++
T Consensus 291 ---~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 291 ---RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ---HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 56788899999999998764 578999999999999999999999874
No 71
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.89 E-value=3.7e-21 Score=155.33 Aligned_cols=197 Identities=19% Similarity=0.191 Sum_probs=158.7
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
++++++++.++.|||+++.... +++++|+|+ |++|.+++|+|+..|+ +|++++.++++.+.++ +++...++++..
T Consensus 160 ~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~-~~~~~~vi~~~~ 238 (386)
T cd08283 160 DEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMAR-SHLGAETINFEE 238 (386)
T ss_pred HHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCcEEEcCCc
Confidence 4578889999999999994333 889999999 8999999999999998 6999999999999999 774446777765
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh----------------------HHHHHHHHhhccCcEEEEEcccccccccccCC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG----------------------EMLEAAVANMNLFGRVAACGVISECADASKRA 145 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~----------------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 145 (223)
.+++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... ..
T Consensus 239 ~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~ 313 (386)
T cd08283 239 VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGT-----VN 313 (386)
T ss_pred chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCC-----cC
Confidence 41378888888877 89999999975 2578899999999999999865431 12
Q ss_pred CCchHHHHhhcceEEeeeccCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCC-CcCcEEEEe
Q 043295 146 VPNMIDIVYKRIKIQGFLSTDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGD-NIGKKFVRI 220 (223)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~-~~gk~v~~~ 220 (223)
..+....+.++.++.+..... .+.+..+++++++|.+.+. +..+++++++.+|++.+.++. ..+|+|+++
T Consensus 314 ~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 314 KFPIGAAMNKGLTLRMGQTHV-----QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred ccCHHHHHhCCcEEEeccCCc-----hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 344556678888888865332 5678889999999999874 556789999999999998877 568999863
No 72
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.89 E-value=1.9e-21 Score=154.59 Aligned_cols=181 Identities=16% Similarity=0.142 Sum_probs=138.9
Q ss_pred hhccccchhhHHHHHHHHh----hCCCEEEEE--CchHHHHHHHHHH-cC-CeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 16 ANGAGTSGFTAYVGFYEIS----QKGEKVFVS--GAYGHLVGQYAKL-GG-CYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 16 aa~l~~~~~ta~~~l~~~~----~~g~~vlI~--g~vG~~a~qla~~-~g-~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
.|+++.++.|+|+++.+.. ++|++|+|. |++|++++|+++. .| .+|++++++++|++.++ +.+.+..++
T Consensus 139 ~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-- 215 (341)
T cd08237 139 VAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-- 215 (341)
T ss_pred HhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh--
Confidence 4557779999999987542 789999999 9999999999996 55 58999999999999998 666543321
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCCh----HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEee
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGG----EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGF 162 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (223)
++. .+ ++|+||||+|+ ..+..++++++++|+++.+|.... ...++...++.+++++.|+
T Consensus 216 ---~~~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~ 279 (341)
T cd08237 216 ---DIP-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGS 279 (341)
T ss_pred ---hhh-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEe
Confidence 111 22 69999999994 468899999999999999996532 2245566778899999988
Q ss_pred eccCccchHHHHHHHHHHHHHcC-----CCCccceeeeccCC---HHHHHHHhHcCCCcCcEEEEec
Q 043295 163 LSTDHFDLHQDFISMTCDALRAG-----KIQPLEDISNGVDS---IPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g-----~i~~~~~~~~~l~~---~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
.... .+.++++++++.+| .+++.++++|++++ +.++++.+.++ ..||+|+.++
T Consensus 280 ~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 280 SRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred cccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 6543 45688899999998 56777888898865 55555555444 6799999875
No 73
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.89 E-value=7.3e-21 Score=150.20 Aligned_cols=198 Identities=22% Similarity=0.329 Sum_probs=156.4
Q ss_pred hhhhhccccchhhHHHHHHHHh----hCCC-EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS----QKGE-KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAF 84 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~----~~g~-~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~ 84 (223)
+++++.++..+.|||.++.... .+++ +|+|+ |++|.+++|+|+..|+++++++.++++.+.++ ++|++.++
T Consensus 117 ~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~ 195 (323)
T TIGR02823 117 LREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVI 195 (323)
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEE
Confidence 4578888999999988875543 6788 99999 89999999999999999999988888889998 89998888
Q ss_pred ecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 85 NYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+.++. +. .++...++++|+++||+|++.+..++++++++|+++.+|..... ....+...++.++.++.++..
T Consensus 196 ~~~~~-~~--~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 196 DREDL-SP--PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred ccccH-HH--HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC-----CccccHHHHhhcceEEEEEec
Confidence 77543 22 44555544799999999998889999999999999999976431 123344556678888888764
Q ss_pred cCc-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDH-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
... .....+.+..+.+++..+.+.+. ...++++++++|++.+.+++..||+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 268 VYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 422 22334556777888888988765 45789999999999999999999999864
No 74
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.89 E-value=4.7e-21 Score=151.34 Aligned_cols=199 Identities=21% Similarity=0.329 Sum_probs=155.9
Q ss_pred hhhhhccccchhhHHHHHHHHh----h-CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS----Q-KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAF 84 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~----~-~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~ 84 (223)
+++++.+++.+.|||+++.... . .+++|+|+ |++|++++|+|+..|++|+++++++++.+.++ ++|++.++
T Consensus 118 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~ 196 (325)
T cd05280 118 LREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVL 196 (325)
T ss_pred HHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEE
Confidence 4578899999999999987654 3 35799999 89999999999999999999999999999998 89999888
Q ss_pred ecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 85 NYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
++++. .....+...++++|+++||+|+..+..++++++++|+++.+|.....+ ...++..++.++.++.++..
T Consensus 197 ~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 197 DREDL--LDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred cchhH--HHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCc-----cccccchheeeeeEEEEEEe
Confidence 76542 122233333348999999999999999999999999999999764321 13344455578888888765
Q ss_pred cCc-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDH-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
... +....+.++.+.+++..+.. +.+..+++++++.++++.+.+++..||+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 270 VNCPMELRKQVWQKLATEWKPDLL-EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ecCchhHHHHHHHHHHHHHhcCCc-cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 443 22334566777777777844 45677889999999999999999999999864
No 75
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.88 E-value=6.8e-21 Score=151.16 Aligned_cols=195 Identities=17% Similarity=0.189 Sum_probs=154.1
Q ss_pred hhhhhccccchhhHHHHHHHHh--hC-----CCEEEEE---CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHHhhCCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QK-----GEKVFVS---GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKEKLGFD 81 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~-----g~~vlI~---g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~~~g~~ 81 (223)
+++++.+++++.|||+++.... ++ +++|+|+ |++|.+++|+|+.. |++|+++++++++.+.++ ++|++
T Consensus 118 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~ 196 (336)
T TIGR02817 118 FAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAH 196 (336)
T ss_pred HHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCC
Confidence 5688999999999999997665 55 8999999 89999999999998 999999999999999998 89999
Q ss_pred eeeecCCcccHHHHHHHhCCCCccEEEcCCC-hHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEE
Q 043295 82 DAFNYKEETDLKATLKRYFPDGIDVYFDNVG-GEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQ 160 (223)
Q Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
+++++.. ++.+.+++..++++|+++|+++ ++.....+++++++|+++.++... ..+...+..++.++.
T Consensus 197 ~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~ 265 (336)
T TIGR02817 197 HVIDHSK--PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLH 265 (336)
T ss_pred EEEECCC--CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEE
Confidence 9998654 5777787754448999999986 478899999999999999875321 233444444556665
Q ss_pred eeecc-C--c--cchH--HHHHHHHHHHHHcCCCCccceeee---ccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 161 GFLST-D--H--FDLH--QDFISMTCDALRAGKIQPLEDISN---GVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 161 g~~~~-~--~--~~~~--~~~~~~~~~~~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+.... . + +... ...++++++++.+|.+++.+...+ +++++.+|++.+.+++..||+|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 266 WEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 53322 1 1 1111 256888999999999987765555 468999999999999988999875
No 76
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.88 E-value=4.2e-21 Score=153.03 Aligned_cols=196 Identities=22% Similarity=0.200 Sum_probs=158.1
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
++++++++.++.|||+++.... +++++|+|. |++|.+++|+|+..|+ +|+++++++++.+.++ ++|++.++++++
T Consensus 143 ~~~aa~l~~~~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~ 221 (347)
T cd05278 143 DEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIINPKN 221 (347)
T ss_pred HHHHhhhcchhhheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCc
Confidence 4588889999999999984333 889999999 8899999999999997 8999988888888888 899999998887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. ++.+.++..+++ ++|++||++|+ ..+..++++++++|+++.+|...... . .......+.+++++.+.....
T Consensus 222 ~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~ 295 (347)
T cd05278 222 G-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPD----P-LPLLGEWFGKNLTFKTGLVPV 295 (347)
T ss_pred c-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCc----c-cCccchhhhceeEEEeeccCc
Confidence 6 788888888776 89999999997 68899999999999999998543211 0 011123346777776654322
Q ss_pred ccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCC-cCcEEEEe
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDN-IGKKFVRI 220 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gk~v~~~ 220 (223)
.+.++++++++.+|.+++. +...++++++.++++.+..+.. .+|+|+++
T Consensus 296 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 296 -----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 5678889999999999864 4567899999999999988776 78998864
No 77
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.88 E-value=7.5e-21 Score=148.93 Aligned_cols=192 Identities=22% Similarity=0.252 Sum_probs=156.4
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++++++.+.|||+++.... .++++++|+ |++|.+++|+|+..|++|+++++++++.+.++ ++|++.+++...
T Consensus 108 ~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 186 (305)
T cd08270 108 FAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS 186 (305)
T ss_pred HHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc
Confidence 4588899999999999998877 669999999 79999999999999999999999999999999 799876554322
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHh--hcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVY--KRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~ 166 (223)
+ ..++++|+++||+|+..+..++++++++|+++.+|.... .....+...+.. ++.++.++....
T Consensus 187 --~-------~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (305)
T cd08270 187 --E-------LSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD 252 (305)
T ss_pred --c-------ccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC
Confidence 1 122479999999999888999999999999999986542 112334444443 578888877653
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+....+.+..+.+++.+|.+++.+..++++++++++++.+.++...||+|+++
T Consensus 253 -~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 253 -GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred -HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 33345678889999999999987777889999999999999998899999864
No 78
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.88 E-value=1.1e-20 Score=150.33 Aligned_cols=192 Identities=23% Similarity=0.216 Sum_probs=156.8
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
+++.+ .++.|||+++.... +++++|+|+ |++|.+++|+|+..|++ |++++.++++.+.++ ++|.+.++++++.
T Consensus 144 ~aa~~-~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~- 220 (343)
T cd08235 144 EAALV-EPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE- 220 (343)
T ss_pred HHHhh-hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCCcc-
Confidence 55544 78899999996655 899999999 88999999999999998 999999999999998 8999999998877
Q ss_pred cHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 91 DLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 91 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
++.+.++..+++ ++|+++||+++ ..+...+++++++|+++.+|..... .....+......+++.+.++....
T Consensus 221 ~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~-- 294 (343)
T cd08235 221 DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITITGSYAAS-- 294 (343)
T ss_pred CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEEEEEecCC--
Confidence 788888888877 89999999996 5788999999999999998864432 112334455566777776655443
Q ss_pred chHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+.++.+++++++|.+++ .+..+++++++.++++.+.+++ .||+|+.
T Consensus 295 ---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 295 ---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred ---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 456788899999999874 3556789999999999999998 8899873
No 79
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.88 E-value=1.3e-20 Score=151.76 Aligned_cols=196 Identities=18% Similarity=0.161 Sum_probs=155.9
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
.+++++.++.|||+++.... ++|++|+|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|+ ..+++.+.
T Consensus 154 ~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~-~~g~-~~v~~~~~- 230 (375)
T cd08282 154 DYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAE-SIGA-IPIDFSDG- 230 (375)
T ss_pred heeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC-eEeccCcc-
Confidence 46778889999999994444 889999999 9999999999999998 8999988999999998 8998 45677765
Q ss_pred cHHHHHHHhCCCCccEEEcCCChH------------HHHHHHHhhccCcEEEEEcccccccccc-------cCCCCchHH
Q 043295 91 DLKATLKRYFPDGIDVYFDNVGGE------------MLEAAVANMNLFGRVAACGVISECADAS-------KRAVPNMID 151 (223)
Q Consensus 91 ~~~~~i~~~~~~~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~~~~~~~~ 151 (223)
++.+.+.+.+++++|+++||+|+. .+..++++++++|+++.+|......... ....++...
T Consensus 231 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (375)
T cd08282 231 DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGL 310 (375)
T ss_pred cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHH
Confidence 788888877766899999999875 4788999999999999887643211100 112345556
Q ss_pred HHhhcceEEeeeccCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 152 IVYKRIKIQGFLSTDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 152 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
++.++..+.+..... .+.+..+++++.++.+++. +..++++++++++++.+.++. .+|+|++
T Consensus 311 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 311 LWAKGLSFGTGQAPV-----KKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred HHhcCcEEEEecCCc-----hhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 666777666544322 5668889999999999874 678899999999999999988 8899985
No 80
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.87 E-value=2.4e-20 Score=146.54 Aligned_cols=190 Identities=18% Similarity=0.163 Sum_probs=155.3
Q ss_pred cchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHH
Q 043295 21 TSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATL 96 (223)
Q Consensus 21 ~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 96 (223)
.++.|+|+++.... +++++++|+ |++|.+++|+|+..|++ |+++++++++.+.++ ++|++.+++++.. ++.+.+
T Consensus 113 ~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l 190 (312)
T cd08269 113 EPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERV 190 (312)
T ss_pred hhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHH
Confidence 78889999987433 899999999 99999999999999998 999999988989888 8999888887665 788888
Q ss_pred HHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHHH
Q 043295 97 KRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDF 174 (223)
Q Consensus 97 ~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (223)
.+.+++ ++|+++||+|+ ......+++++++|+++.+|.... ....+++.....++..+.++.... +....+.
T Consensus 191 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 264 (312)
T cd08269 191 RELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLEG 264 (312)
T ss_pred HHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhhH
Confidence 888877 99999999985 578889999999999999986542 122334456667777777665433 2233578
Q ss_pred HHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCC-cCcEEE
Q 043295 175 ISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDN-IGKKFV 218 (223)
Q Consensus 175 ~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gk~v~ 218 (223)
++.+++++++|.+.+. +..+++++++.++++.+.+++. .+|+++
T Consensus 265 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 265 MREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 8899999999999873 5677899999999999999864 578886
No 81
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.87 E-value=3.6e-21 Score=132.29 Aligned_cols=127 Identities=26% Similarity=0.445 Sum_probs=114.1
Q ss_pred chHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCC-CccEEEcCCC-hHHHHHHHHh
Q 043295 45 AYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPD-GIDVYFDNVG-GEMLEAAVAN 122 (223)
Q Consensus 45 ~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g-~~~~~~~~~~ 122 (223)
++|++++|+|+..|++|+++++++++++.++ ++|++.++++++. ++.+++++.+++ ++|+||||+| .+.++.++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 5899999999999999999999999999999 9999999999987 899999999998 9999999999 6899999999
Q ss_pred hccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHHHHHHHHHHHH
Q 043295 123 MNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFISMTCDALR 183 (223)
Q Consensus 123 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (223)
++++|+++.+|.... .....+...++.++.++.|+.... .+.++++++++.
T Consensus 79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 999999999998872 234667889999999999999887 566666666654
No 82
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.87 E-value=2.5e-20 Score=148.33 Aligned_cols=199 Identities=26% Similarity=0.305 Sum_probs=157.6
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.+ .++.|||+++.... +++++|+|+ |.+|.+++|+|+..|++ |+++++++++.+.++ ++|++.++++++
T Consensus 136 ~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~ 213 (343)
T cd08236 136 YEEAAMI-EPAAVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKE 213 (343)
T ss_pred HHHHHhc-chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCcc
Confidence 3456655 67899999997444 899999999 89999999999999997 999999999999998 899999998887
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. . .+.+.+..++ ++|+++||+|+ ..+..++++++++|+++.+|..... ..........++.++.++.++....
T Consensus 214 ~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (343)
T cd08236 214 E-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSY 288 (343)
T ss_pred c-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeecc
Confidence 6 5 7777777776 89999999986 6788999999999999999865421 0111223445567788888877643
Q ss_pred ccchHHHHHHHHHHHHHcCCCC--ccceeeeccCCHHHHHHHhHc-CCCcCcEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQ--PLEDISNGVDSIPSAFTGFFR-GDNIGKKFV 218 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~-~~~~gk~v~ 218 (223)
......+.++++++++++|.+. +.+..+++++++.++++.+.+ +...||+|+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 289 SAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 3223356688899999999986 445677899999999999998 557788874
No 83
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.87 E-value=2.4e-20 Score=150.60 Aligned_cols=193 Identities=18% Similarity=0.195 Sum_probs=154.5
Q ss_pred hhhhccccchhhHHHHHHHH-h--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 14 VFANGAGTSGFTAYVGFYEI-S--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~-~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
.++|+++.++.|||+++... . ++|++|+|+ |++|++++|+|+..|+ +|++++.++++.+.++ ++|++.++++.
T Consensus 178 ~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~ 256 (384)
T cd08265 178 FEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPT 256 (384)
T ss_pred HHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEccc
Confidence 35777888999999999665 3 899999999 9999999999999999 7999998888888888 89998888876
Q ss_pred Cc--ccHHHHHHHhCCC-CccEEEcCCCh--HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEee
Q 043295 88 EE--TDLKATLKRYFPD-GIDVYFDNVGG--EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGF 162 (223)
Q Consensus 88 ~~--~~~~~~i~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (223)
+. .++.+.+++.+++ ++|+++||+|+ ..+..++++++++|+++.+|.... ...++...+..+..++.++
T Consensus 257 ~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~l~~~ 330 (384)
T cd08265 257 KMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVRRAQIVGA 330 (384)
T ss_pred ccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhCceEEEEe
Confidence 31 1577788888887 99999999996 367889999999999999986532 1123345555667777776
Q ss_pred eccCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 163 LSTDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
..... ...+.++++++++|.+++. +..+++++++.+|++.+.++ ..||+|+
T Consensus 331 ~~~~~----~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 331 QGHSG----HGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred eccCC----cchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 54321 3457889999999999864 56678999999999997554 5788886
No 84
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.87 E-value=5e-20 Score=145.08 Aligned_cols=200 Identities=23% Similarity=0.351 Sum_probs=166.4
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
.++++.+++++.|||+++.... .++++++|+ |++|.+++++++..|++|+++++++++.+.++ ++|++.+++..
T Consensus 119 ~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 197 (325)
T cd08253 119 FEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYR 197 (325)
T ss_pred HHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCC
Confidence 3478889999999999998755 889999999 89999999999999999999999999999998 89998888887
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
.. ++.+.+++.+++ ++|+++||+|+......+++++++|+++.+|.... ....+...++.++.++.+.....
T Consensus 198 ~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 270 (325)
T cd08253 198 AE-DLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYT 270 (325)
T ss_pred Cc-CHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhh
Confidence 76 788888887766 89999999998888889999999999999987541 11233444566777777766443
Q ss_pred c-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 H-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
. +....+.+..+.+++.++.+++.....++++++.++++.+.++...||+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 271 ATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred cCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 2 34456678888889999999887778889999999999999988899999863
No 85
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.87 E-value=2.5e-20 Score=145.51 Aligned_cols=199 Identities=21% Similarity=0.322 Sum_probs=159.6
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
.+++++++.++.|||+++.... +++++++|+ |++|.+++|+++..|++|+++++++++.+.++ ++|++.++++..
T Consensus 96 ~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 174 (303)
T cd08251 96 FEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVE 174 (303)
T ss_pred HHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCC
Confidence 4478889999999999996444 899999998 89999999999999999999999999999998 899999998877
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. ++.+.+...+++ ++|+++|++++......+++++++|+++.+|..+... ....... .+.++..+........
T Consensus 175 ~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~ 248 (303)
T cd08251 175 E-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDLS-VLSNNQSFHSVDLRKL 248 (303)
T ss_pred c-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccChh-HhhcCceEEEEehHHh
Confidence 6 788888888877 9999999999888889999999999999988654211 1122222 2334444444333221
Q ss_pred ----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 168 ----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 168 ----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
+....+.+.++.+++.+|.+++.....++++++.++++.+.+++..||+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 249 LLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred hhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 233456778899999999998877788899999999999999888888874
No 86
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.87 E-value=3.3e-20 Score=147.76 Aligned_cols=188 Identities=21% Similarity=0.274 Sum_probs=154.8
Q ss_pred ccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCcccHH
Q 043295 18 GAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEETDLK 93 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 93 (223)
++...+.|||+++.... +++++|+|. |++|++++|+|+..|++ ++++++++.+.+.++ ++|++.++++.+. .+.
T Consensus 149 ~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~~-~~~ 226 (345)
T cd08287 149 ALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIVAERGE-EAV 226 (345)
T ss_pred hhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEecCCcc-cHH
Confidence 34467899999986544 889999999 99999999999999995 888888888888888 8999999999876 788
Q ss_pred HHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchH
Q 043295 94 ATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLH 171 (223)
Q Consensus 94 ~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (223)
+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|.... ...++....+.++.++.+.....
T Consensus 227 ~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~----- 295 (345)
T cd08287 227 ARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNVGLAGGPAPV----- 295 (345)
T ss_pred HHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcceEEEEecCCc-----
Confidence 888888877 99999999986 678999999999999999986542 12344446678888887744332
Q ss_pred HHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 172 QDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 172 ~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+.+.++++++.+|.+++. +..+++++++.++++.+.++... |++++
T Consensus 296 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 296 RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 5678889999999999873 46778999999999998877655 99885
No 87
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.87 E-value=3.5e-20 Score=147.70 Aligned_cols=194 Identities=19% Similarity=0.159 Sum_probs=158.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
..+++.++.++.|||+++.... +++++++|+ |++|.+++|+|+..| .+|++++.++.+.+.++ ++|++.++++.
T Consensus 141 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~ 219 (345)
T cd08286 141 EEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSA 219 (345)
T ss_pred HHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccc
Confidence 4478888899999999765544 899999999 999999999999999 69999888888988888 89999999988
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
+. ++...+...+++ ++|++|||+|+ +.+..+++.++++|+++.+|.... ...+++..++.+++++.+....
T Consensus 220 ~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08286 220 KG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITTGLVD 292 (345)
T ss_pred cc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEeecCc
Confidence 76 777888877776 89999999985 578888999999999999986432 1234566667788888764322
Q ss_pred CccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCC--cCcEEEEe
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDN--IGKKFVRI 220 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~--~gk~v~~~ 220 (223)
.+.+..+.+++++|.+++. +..+++++++.++++.+.+... ..|+||++
T Consensus 293 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 2457788899999998764 5678899999999999987642 35998864
No 88
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.87 E-value=3.2e-20 Score=147.61 Aligned_cols=190 Identities=21% Similarity=0.180 Sum_probs=147.0
Q ss_pred hccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 17 NGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 17 a~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
++++.+++|||+++.... +++++|+|+ |++|.+++|+|+..|++ +++++.++++.+.++ ++|++.++++++. +.
T Consensus 141 a~~~~~~~~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~ 218 (341)
T cd08262 141 AALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SP 218 (341)
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CH
Confidence 347788899999864444 899999999 99999999999999996 677777888989888 8999888887654 32
Q ss_pred HH---HHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 93 KA---TLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 93 ~~---~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
.+ .+....++ ++|+++|++|+ ..+..++.+++++|+++.+|..... ..........++.++.++....
T Consensus 219 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 291 (341)
T cd08262 219 FAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES------DNIEPALAIRKELTLQFSLGYT- 291 (341)
T ss_pred HHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC------CccCHHHHhhcceEEEEEeccc-
Confidence 21 34444555 89999999997 4788899999999999999876321 1122222245666666544333
Q ss_pred cchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 168 FDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+.+.++++++++|.+.+. +..++++++++++++.+.+++..||+|++
T Consensus 292 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 292 ----PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ----HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 4567889999999999864 46788999999999999999989999974
No 89
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.87 E-value=3.1e-20 Score=147.33 Aligned_cols=192 Identities=23% Similarity=0.294 Sum_probs=156.4
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+.+++.+++++.|||+++.... +++++|+|+ |.+|++++|+|+..|++|+++++++++.+.++ ++ ++.+++++
T Consensus 138 ~~~~a~l~~~~~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~- 214 (334)
T PRK13771 138 DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS- 214 (334)
T ss_pred HHHhhcccchHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch-
Confidence 3478889999999999997777 899999999 79999999999999999999999999999997 78 76776654
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
++.+.++.. +++|+++||+|+.....++++++++|+++.+|..... ..........+.+++++.+.....
T Consensus 215 --~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-- 284 (334)
T PRK13771 215 --KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISAT-- 284 (334)
T ss_pred --hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCCC--
Confidence 355556554 3699999999998889999999999999999975431 111123344466788887764322
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
++.++.+++++++|.+++.+..+++++++.+|++.+.++...||+|+..
T Consensus 285 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 ---KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred ---HHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 5678889999999999887778889999999999999888889999865
No 90
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.87 E-value=2.9e-20 Score=148.46 Aligned_cols=191 Identities=18% Similarity=0.181 Sum_probs=153.3
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.+ .++.|+|+++.... +++++|+|. |++|.+++|+|+..|+ .++++++++++.+.+. ++|++.++++..
T Consensus 151 ~~~aa~~-~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~ 228 (350)
T cd08256 151 PEDAILI-EPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGADVVLNPPE 228 (350)
T ss_pred HHHHhhh-hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCcEEecCCC
Confidence 3466666 88999999984444 899999999 9999999999999998 4778888888888888 899998988876
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHH-HhhcceEEeeecc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDI-VYKRIKIQGFLST 165 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 165 (223)
. ++.+.+.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|..... ...+...+ ..+++++.++...
T Consensus 229 ~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~i~~~~~~ 301 (350)
T cd08256 229 V-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIGDRKELDVLGSHLG 301 (350)
T ss_pred c-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhhcccccEEEEeccC
Confidence 6 788888888877 89999999995 6788899999999999999864321 12223222 3456677766543
Q ss_pred CccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
. ..+.++++++++|.+++. +..+++++++.+|++.+.+++..+|+|+
T Consensus 302 ~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 302 P------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred c------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 2 357788999999999874 5678899999999999999888889874
No 91
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.87 E-value=4.1e-20 Score=148.20 Aligned_cols=197 Identities=20% Similarity=0.245 Sum_probs=159.7
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.... .++++|+|+ |++|.+++|+|+..|++ |+++.+++++.+.++ ++|++.+++++
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~-~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELAR-RFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-HhCCeEEeCCC
Confidence 3478888999999999987766 899999999 89999999999999995 999999999999998 89999999888
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
.. ++...+++.+++ ++|+++|++++ ......+++++++|+++.+|..... ....++...+..++..+.++...
T Consensus 236 ~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 310 (363)
T cd08279 236 ED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----ETVSLPALELFLSEKRLQGSLYG 310 (363)
T ss_pred Cc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----cccccCHHHHhhcCcEEEEEEec
Confidence 76 788888888766 89999999994 6788999999999999999865421 12234555666667776665543
Q ss_pred CccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEE
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKF 217 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v 217 (223)
.. ...+.++++++++++|.+++. +..+++++++.+|++.+.+++..+.++
T Consensus 311 ~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 311 SA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred Cc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 21 225678889999999999863 567789999999999999887765554
No 92
>PRK10083 putative oxidoreductase; Provisional
Probab=99.87 E-value=5.1e-20 Score=146.37 Aligned_cols=190 Identities=19% Similarity=0.119 Sum_probs=149.1
Q ss_pred hccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHH-cCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCccc
Q 043295 17 NGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKL-GGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEETD 91 (223)
Q Consensus 17 a~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~-~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 91 (223)
+++..++.++|+++.... ++|++|+|+ |++|++++|+|+. +|++ ++++++++++.+.++ ++|++.++++.+. +
T Consensus 140 a~~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~ 217 (339)
T PRK10083 140 AVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE-P 217 (339)
T ss_pred HhhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-c
Confidence 346677888886554444 899999999 9999999999996 6995 777888889999998 8999999988765 6
Q ss_pred HHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccc
Q 043295 92 LKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFD 169 (223)
Q Consensus 92 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (223)
+.+.+.. .+ ++|++||++|+ ..+..++++++++|+++.+|.... ...++...+..+++++.+....
T Consensus 218 ~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~---- 285 (339)
T PRK10083 218 LGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSRLN---- 285 (339)
T ss_pred HHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEecC----
Confidence 6666643 23 57899999995 678999999999999999987542 1122344444566666665431
Q ss_pred hHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCC-CcCcEEEEecC
Q 043295 170 LHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGD-NIGKKFVRIAG 222 (223)
Q Consensus 170 ~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~-~~gk~v~~~~~ 222 (223)
.+.++++++++++|.+++. +..+++++++.+|++.+.++. ..+|+|+.+.+
T Consensus 286 --~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 286 --ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred --hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 4568889999999999874 678899999999999998654 56899999864
No 93
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.87 E-value=1.3e-19 Score=143.80 Aligned_cols=196 Identities=23% Similarity=0.350 Sum_probs=163.9
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.++.++.|||+++.+.. .++++++|+ +++|.+++++++..|++|+.+++++++.+.++ .++.+.+++..
T Consensus 141 ~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 219 (342)
T cd08266 141 FEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYR 219 (342)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecC
Confidence 3478888889999999987665 889999999 58999999999999999999999999989888 78887788776
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
+. ++.+.+...+.+ ++|+++|++|+..+...+++++++|+++.+|..... ....+....+.++.++.++....
T Consensus 220 ~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 220 KE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred Ch-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC
Confidence 65 677777777766 899999999998889999999999999999866532 12344445677888888877654
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
...+..++++++++.+++.+...++++++.++++.+.++...+|+|++.
T Consensus 294 -----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 -----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred -----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 4578889999999999888778899999999999999888889999863
No 94
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.87 E-value=6e-20 Score=146.23 Aligned_cols=189 Identities=20% Similarity=0.240 Sum_probs=151.0
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
+++.+ .++.|||+++.... +++++|+|+ |++|.+++|+|+..|++ |+++++++++.+.++ ++|++.++++++.
T Consensus 141 ~aa~~-~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~- 217 (343)
T cd05285 141 EGALV-EPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE- 217 (343)
T ss_pred Hhhhh-hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-
Confidence 55544 57889999974444 899999999 89999999999999997 999998999999998 8999999988765
Q ss_pred cH---HHHHHHhCCC-CccEEEcCCChH-HHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeecc
Q 043295 91 DL---KATLKRYFPD-GIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLST 165 (223)
Q Consensus 91 ~~---~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 165 (223)
++ .+.+.+.+++ ++|+++||+|+. .+...+++++++|+++.+|..... ...+......+++.+.++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd05285 218 DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRY 291 (343)
T ss_pred cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccC
Confidence 53 7778877777 899999999975 788999999999999999864321 123344555667776665432
Q ss_pred CccchHHHHHHHHHHHHHcCCCC--ccceeeeccCCHHHHHHHhHcCC-CcCcEEE
Q 043295 166 DHFDLHQDFISMTCDALRAGKIQ--PLEDISNGVDSIPSAFTGFFRGD-NIGKKFV 218 (223)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~-~~gk~v~ 218 (223)
.+.+.+++++++++.+. +.+..+++++++.+|++.+.+++ ..+|+++
T Consensus 292 ------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 ------ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred ------hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 25678889999999875 34566789999999999999885 4489987
No 95
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.86 E-value=6.2e-20 Score=147.25 Aligned_cols=197 Identities=18% Similarity=0.183 Sum_probs=156.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.... +++++|+|+ |++|++++|+|+..|++ |+++++++++.+.++ ++|++.+++++
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~ 236 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK-QLGATECINPR 236 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCeecccc
Confidence 4578888889999999987766 889999999 99999999999999995 778888999999998 89999888876
Q ss_pred Ccc-cHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhc-cCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EET-DLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMN-LFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+.+ ++.+.+++.+++++|+++|++|. ..+..++++++ ++|+++.+|..... ....++...+ .++.++.|+..
T Consensus 237 ~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~-~~~~~l~g~~~ 311 (365)
T cd05279 237 DQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG----TEATLDPNDL-LTGRTIKGTVF 311 (365)
T ss_pred cccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCC----CceeeCHHHH-hcCCeEEEEec
Confidence 531 46667777775699999999985 78889999999 99999999864311 1224455555 66777777755
Q ss_pred cCccchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
..+. ..+.+..+++++++|.+++. +..+++++++.+||+.+.+++.. |+++
T Consensus 312 ~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 312 GGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred cCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 4321 24667889999999998864 66778999999999999877654 6655
No 96
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.86 E-value=1.7e-19 Score=142.10 Aligned_cols=200 Identities=27% Similarity=0.380 Sum_probs=165.5
Q ss_pred hhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 14 VFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
..+++++.++.|+|+++.... +++++++|+ |++|.+++++++..|++|+++++++++.+.++ ++|++.+++...
T Consensus 115 ~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 193 (325)
T TIGR02824 115 VEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYRE 193 (325)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCc
Confidence 477889999999999987666 889999999 89999999999999999999999999888887 899888887776
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. ++.+.++...++ ++|+++||+|+.....++++++++|+++.+|...... . ..++..++.+++++.++.....
T Consensus 194 ~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T TIGR02824 194 E-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRK----A-ELDLGPLLAKRLTITGSTLRAR 267 (325)
T ss_pred h-hHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCc----C-CCChHHHHhcCCEEEEEehhhc
Confidence 5 677888887776 8999999999888889999999999999998754321 1 3445555688999998875442
Q ss_pred -----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 168 -----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 168 -----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+....+.+.+++++++++.+.+.....++++++.++++.+.++...||+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 268 PVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred chhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 22234566778899999999877777889999999999999888889999864
No 97
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.86 E-value=6.9e-20 Score=145.75 Aligned_cols=190 Identities=21% Similarity=0.284 Sum_probs=150.9
Q ss_pred cccchhhHHHHHHHHhhCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHH
Q 043295 19 AGTSGFTAYVGFYEISQKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKAT 95 (223)
Q Consensus 19 l~~~~~ta~~~l~~~~~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 95 (223)
...++.++++++.....+|++|+|+ |++|.+++|+|+..|+ +|+++..++++.+.++ ++|++.++++++. ++.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~~~ 223 (341)
T PRK05396 146 IFDPFGNAVHTALSFDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE-DLRDV 223 (341)
T ss_pred hhhHHHHHHHHHHcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHHH
Confidence 4456677766654322789999999 9999999999999999 6888888888989888 8999999988876 78888
Q ss_pred HHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHH
Q 043295 96 LKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQD 173 (223)
Q Consensus 96 i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (223)
+++.+++ ++|++|||.|+ ..+..++++++++|+++.+|..... ...+...+..++.++.++..... .+
T Consensus 224 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~~----~~ 293 (341)
T PRK05396 224 MAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVIFKGLTIKGIYGREM----FE 293 (341)
T ss_pred HHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------CcccHHHHhhcceEEEEEEccCc----cc
Confidence 8888876 99999999986 5788999999999999999875421 12234666777888877653321 23
Q ss_pred HHHHHHHHHHcC-CCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEec
Q 043295 174 FISMTCDALRAG-KIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRIA 221 (223)
Q Consensus 174 ~~~~~~~~~~~g-~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~~ 221 (223)
.+..+++++.++ .+.+.+..+++++++.+|++.+.++. .||+|++|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 294 TWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred hHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 455678888888 45555677889999999999998876 799999874
No 98
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.86 E-value=4.3e-20 Score=146.83 Aligned_cols=193 Identities=19% Similarity=0.258 Sum_probs=153.9
Q ss_pred hhhhhccccchhhHHHHHHHHh------------hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS------------QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK 77 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~------------~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~ 77 (223)
++.++.+++++.|||+++.... .++++++|+ |++|++++|+|+..|++|++++ ++++.+.++ +
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-S 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-h
Confidence 4478888999999999987653 478999999 7899999999999999999988 568889997 8
Q ss_pred hCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhcc--CcEEEEEcccccccccccCCCCchHHHHh
Q 043295 78 LGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNL--FGRVAACGVISECADASKRAVPNMIDIVY 154 (223)
Q Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 154 (223)
+|++.++++.+. ++.+.++..+++++|+++|++|+ ..+..+++++++ +|+++.+|...... .+.
T Consensus 197 ~g~~~v~~~~~~-~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~ 263 (339)
T cd08249 197 LGADAVFDYHDP-DVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPR 263 (339)
T ss_pred cCCCEEEECCCc-hHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCC
Confidence 999999998876 78888888776789999999998 889999999999 99999998654321 011
Q ss_pred hcceEEee---ecc----CccchHHHHHHHHHHHHHcCCCCccceeeec--cCCHHHHHHHhHcCC-CcCcEEEEe
Q 043295 155 KRIKIQGF---LST----DHFDLHQDFISMTCDALRAGKIQPLEDISNG--VDSIPSAFTGFFRGD-NIGKKFVRI 220 (223)
Q Consensus 155 ~~~~~~g~---~~~----~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~--l~~~~~a~~~~~~~~-~~gk~v~~~ 220 (223)
.+...... ... ..+......++.+.++++++.+.+....+++ ++++.+|++.+.+++ ..+|+|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 264 KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred CCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 12222221 111 1123334678889999999999987666777 999999999999998 889999874
No 99
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.86 E-value=2.2e-19 Score=141.26 Aligned_cols=199 Identities=26% Similarity=0.399 Sum_probs=164.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+.++++++.++.|+|+++.... .++++++|+ |++|++++++++..|++|+.+++++++.+.++ ++|++.+++..
T Consensus 114 ~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 192 (323)
T cd05276 114 LVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYR 192 (323)
T ss_pred HHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCC
Confidence 3478889999999999988766 889999999 78999999999999999999999989989887 89988888877
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
.. ++.+.+.+.+.+ ++|+++|++|+......+++++++|+++.+|..+... ...+...++.++.++.++....
T Consensus 193 ~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05276 193 TE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRS 266 (323)
T ss_pred ch-hHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccc
Confidence 66 777888877766 8999999999988888999999999999998654321 1334455567888888877543
Q ss_pred c-----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 167 H-----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 167 ~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
. +......+.++.+++.++.+++.....++++++.++++.+.++...||+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 267 RSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred hhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 2 222345677788899999998877788999999999999998888888874
No 100
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.86 E-value=1.5e-19 Score=140.17 Aligned_cols=199 Identities=25% Similarity=0.360 Sum_probs=160.3
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC--CCeeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG--FDDAFN 85 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g--~~~~~~ 85 (223)
+.+++.+++++.|+|+++.... ++|++++|+ |++|++++|+++..|++|+++++++++.+.++ ++| ++.+++
T Consensus 83 ~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 161 (293)
T cd05195 83 FEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFS 161 (293)
T ss_pred HHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEee
Confidence 3477888899999999997766 899999999 89999999999999999999999989999998 777 678888
Q ss_pred cCCcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 86 YKEETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 86 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+... ++.+.+++.+++ ++|+++||+|+..+...+.+++++|+++.+|...... ...... ..+.++..+.+...
T Consensus 162 ~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~-~~~~~~~~~~~~~~ 235 (293)
T cd05195 162 SRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS----NSKLGM-RPFLRNVSFSSVDL 235 (293)
T ss_pred cCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc----CCccch-hhhccCCeEEEEeH
Confidence 7766 788888888876 8999999999988999999999999999998654321 111122 23445666665554
Q ss_pred cCc----cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 165 TDH----FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 165 ~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
... +....+.+..+.+++.++.+++..+..++++++.++++.+.++...||+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 236 DQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 332 223355788899999999999887888899999999999998888888874
No 101
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.85 E-value=2.1e-19 Score=141.93 Aligned_cols=198 Identities=21% Similarity=0.275 Sum_probs=156.6
Q ss_pred hhhhhccccchhhHHHHHH---HHh-h-CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeee
Q 043295 13 YVFANGAGTSGFTAYVGFY---EIS-Q-KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAF 84 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~---~~~-~-~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~ 84 (223)
+++++.++.+++||+.++. ... . ++++|+|+ |++|.+++|+|+..|++|++++.++++.+.++ ++|++.++
T Consensus 118 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~ 196 (324)
T cd08288 118 ARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEII 196 (324)
T ss_pred HHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEE
Confidence 4578888999999987765 333 4 67899999 89999999999999999999999999999998 89999999
Q ss_pred ecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 85 NYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 85 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
++++. ...++..+++++|.++|++++..+...+..++.+|+++.+|..... ....++..++.++.++.++..
T Consensus 197 ~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08288 197 DRAEL---SEPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA-----DLPTTVMPFILRGVTLLGIDS 268 (324)
T ss_pred Ecchh---hHhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC-----CCCcchhhhhccccEEEEEEe
Confidence 87653 2355555555789999999987777888899999999999875321 112344455578899888764
Q ss_pred cCc-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDH-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
... .....+.+..+.+++.++.+++ +...++++++.++++.+.+++..||+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 269 VMAPIERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred ecccchhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 332 2234567788888999998876 467889999999999999999999999864
No 102
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.85 E-value=1.8e-19 Score=143.38 Aligned_cols=193 Identities=20% Similarity=0.281 Sum_probs=152.7
Q ss_pred hhhccccchhhHHHHHHHHhhCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCccc
Q 043295 15 FANGAGTSGFTAYVGFYEISQKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEETD 91 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 91 (223)
..++++.++.+|++++....+++++++|. |++|.+++|+|+..|++ |+++..++++.+.++ ++|++.++++... +
T Consensus 140 ~~a~~~~~~~~a~~~~~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~ 217 (340)
T TIGR00692 140 EYATIQEPLGNAVHTVLAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-D 217 (340)
T ss_pred HhhhhcchHHHHHHHHHccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-C
Confidence 45567888899998872211789999999 99999999999999996 888888888888888 8999888888776 7
Q ss_pred HHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchH-HHHhhcceEEeeeccCcc
Q 043295 92 LKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMI-DIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 92 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 168 (223)
+.+.+.+.+++ ++|+++||+|+ ..+...+++++++|+++.+|..... ...+.. .++.++.++.++....
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-- 289 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK------VTIDFTNKVIFKGLTIYGITGRH-- 289 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC------cccchhhhhhhcceEEEEEecCC--
Confidence 88888888776 99999999885 6788899999999999999875321 111222 4555677776654222
Q ss_pred chHHHHHHHHHHHHHcCCCC--ccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 169 DLHQDFISMTCDALRAGKIQ--PLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
..+.+.++++++.+|.++ +.+...++++++.++++.+.++.. ||+|+++
T Consensus 290 --~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 290 --MFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred --chhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 234577899999999997 445678899999999999987764 9999875
No 103
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.85 E-value=1.9e-19 Score=139.43 Aligned_cols=199 Identities=22% Similarity=0.336 Sum_probs=158.5
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC--Ceeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF--DDAFN 85 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~--~~~~~ 85 (223)
+.+++.+++++.|+|+++.... .++++|+|+ |++|.+++|+++..|++|+++++++++.+.++ ++|+ +.+++
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 157 (288)
T smart00829 79 FEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFS 157 (288)
T ss_pred HHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheee
Confidence 3478888899999999986655 889999999 89999999999999999999999999999998 8998 78888
Q ss_pred cCCcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 86 YKEETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 86 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+.+. ++.+.+...+++ ++|+++|++|+......+++++++|+++.+|...... ....+... +.++.++.+...
T Consensus 158 ~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~~-~~~~~~~~~~~~ 231 (288)
T smart00829 158 SRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMAP-FRRNVSYHAVDL 231 (288)
T ss_pred CCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchhh-hcCCceEEEEEH
Confidence 8776 788888887776 8999999999888888999999999999998654211 11222222 456666666554
Q ss_pred cCc---cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 165 TDH---FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 165 ~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
... +....+.+..+.+++.++.+.+.....++++++.++++.+..+...||+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 232 DALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred HHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 321 122345677888999999988766677899999999999998887788774
No 104
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.85 E-value=2e-19 Score=143.17 Aligned_cols=191 Identities=20% Similarity=0.258 Sum_probs=152.1
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
++++++.++.++++++. .. .++++|+|+ |++|.+++|+|+..|+ +|++++.++++.+.++ ++|++.+++++..
T Consensus 142 ~~a~~~~~~~~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~- 218 (341)
T cd05281 142 EIASIQEPLGNAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE- 218 (341)
T ss_pred HHhhhhhHHHHHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc-
Confidence 45577788889998875 33 889999999 9999999999999999 7999988888888888 8999888888765
Q ss_pred cHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCc-hHHHHhhcceEEeeeccCc
Q 043295 91 DLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPN-MIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 91 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~ 167 (223)
++. .+++.+++ ++|++|||+|+ .....++++++++|+++.+|..... ...+ ....+.++..+.++.....
T Consensus 219 ~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd05281 219 DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP------VDIDLNNLVIFKGLTVQGITGRKM 291 (341)
T ss_pred cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC------cccccchhhhccceEEEEEecCCc
Confidence 677 78887776 99999999986 5788899999999999999865431 1112 1235667777776653321
Q ss_pred cchHHHHHHHHHHHHHcCCCCc--cceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 168 FDLHQDFISMTCDALRAGKIQP--LEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.+.+..+.+++.+|.+.+ .+..+++++++.++|+.+.++. .||+|++.
T Consensus 292 ----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 292 ----FETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred ----chhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 345677889999999863 3556789999999999999988 89999863
No 105
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.85 E-value=2.8e-19 Score=141.91 Aligned_cols=196 Identities=18% Similarity=0.205 Sum_probs=156.5
Q ss_pred hhhhhccccchhhHHHHHHHHh--hC-----CCEEEEE---CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QK-----GEKVFVS---GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGFD 81 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~-----g~~vlI~---g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~~ 81 (223)
+++++.++..+.|||+++.... .+ +++|+|+ |++|++++|+|+..| ++|+++++++++.+.++ ++|++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~ 197 (336)
T cd08252 119 FAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGAD 197 (336)
T ss_pred HHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc
Confidence 4478888999999999987665 56 9999999 899999999999999 89999999999999998 89999
Q ss_pred eeeecCCcccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEE
Q 043295 82 DAFNYKEETDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQ 160 (223)
Q Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
.++++.+ ++.+.++...++++|+++||+|+ ..+..++++++++|+++.+|... ...+...++.++.++.
T Consensus 198 ~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~ 267 (336)
T cd08252 198 HVINHHQ--DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFH 267 (336)
T ss_pred EEEeCCc--cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEE
Confidence 8988764 56667765443489999999995 68899999999999999998542 1233444456778877
Q ss_pred eeeccCc-----c--chHHHHHHHHHHHHHcCCCCcccee---eeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 161 GFLSTDH-----F--DLHQDFISMTCDALRAGKIQPLEDI---SNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 161 g~~~~~~-----~--~~~~~~~~~~~~~~~~g~i~~~~~~---~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+...... + ......+..+++++.+|.+++.... .++++++.++++.+.++...||++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 268 WEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 7554321 1 1234678889999999999876433 35899999999999999989999874
No 106
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.85 E-value=5.4e-19 Score=139.46 Aligned_cols=201 Identities=26% Similarity=0.332 Sum_probs=165.6
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+..++.++.++.|+|+++.... .++++++|+ |++|++++++++..|++++.++.++.+.+.++ ++|.+.++++.
T Consensus 119 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 197 (328)
T cd08268 119 FVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTD 197 (328)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecC
Confidence 3477889999999999987766 789999999 89999999999999999999999999999997 88988888887
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
.. .+...+...+.+ ++|+++++.|+......+++++++|+++.+|..... ....+....+.++.++.++....
T Consensus 198 ~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 271 (328)
T cd08268 198 EE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGE-----PTPFPLKAALKKSLTFRGYSLDE 271 (328)
T ss_pred Cc-cHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhcCCEEEEEeccc
Confidence 76 777778777776 899999999998888999999999999999865431 11233444578888888876543
Q ss_pred c---cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 H---FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 ~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
. +......+..+.+++.++.+.+.....++++++.++++.+.++...||+|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 272 ITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2 33445667777888889999887777889999999999999888889999864
No 107
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.85 E-value=5.4e-19 Score=139.10 Aligned_cols=198 Identities=27% Similarity=0.349 Sum_probs=163.4
Q ss_pred hhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 15 FANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
++++++.++.+||+++.... .++++|+|+ |++|.+++++++..|++|+.++.++++.+.++ ++|++.+++....
T Consensus 116 ~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 194 (323)
T cd08241 116 EAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP 194 (323)
T ss_pred HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc
Confidence 56778899999999987665 889999999 78999999999999999999999999999998 8998888887776
Q ss_pred ccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc-
Q 043295 90 TDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH- 167 (223)
Q Consensus 90 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 167 (223)
++.+.++..+++ ++|.++||+|+.....++++++++|+++.+|..... .........+.++.++.++....+
T Consensus 195 -~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T cd08241 195 -DLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYA 268 (323)
T ss_pred -cHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEeccccc
Confidence 788888888877 899999999998888899999999999999864321 111233345668888888775543
Q ss_pred ---cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 168 ---FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 168 ---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+....+.+.++++++.++.+.+.....++++++.++++.+.++...+|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 269 RREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred chhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 2223467788999999999987777788999999999999988888898863
No 108
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.85 E-value=4e-19 Score=140.69 Aligned_cols=191 Identities=26% Similarity=0.316 Sum_probs=153.8
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.+++++.|||+++.... +++++++|+ |++|.+++++++..|++|+++++++++.+.++ ++|.+.+++..
T Consensus 138 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~- 215 (332)
T cd08259 138 DESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS- 215 (332)
T ss_pred HHHHhhhccHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH-
Confidence 4578889999999999998844 889999999 89999999999999999999999988888887 88887777543
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
++.+.+.+.. ++|++++++|+......+++++++|+++.+|...... ...+......++..+.++....
T Consensus 216 --~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-- 284 (332)
T cd08259 216 --KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKEIRIIGSISAT-- 284 (332)
T ss_pred --HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCCcEEEEecCCC--
Confidence 2445555443 6999999999988889999999999999998654321 1123333345667666654222
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
.+.++++++++++|.+++.+..+++++++.+|++.+.++...||+|++
T Consensus 285 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 ---KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred ---HHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 567888999999999998888889999999999999998888999874
No 109
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.84 E-value=5.6e-19 Score=140.42 Aligned_cols=187 Identities=20% Similarity=0.252 Sum_probs=148.5
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
+++ ++.++.|||+++.... .++++|||. |++|.+++|+|+..|+ +|++++.++++.+.++ ++|++.++++++.
T Consensus 144 ~aa-~~~~~~~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~- 220 (339)
T cd08232 144 RAA-LAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD- 220 (339)
T ss_pred Hhh-hcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-
Confidence 444 4678899999997776 789999999 9999999999999999 8999998888888888 8999999988764
Q ss_pred cHHHHHHHhC-CC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 91 DLKATLKRYF-PD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 91 ~~~~~i~~~~-~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
++ .+.. .. ++|+++||+|+ ..+...+++|+++|+++.+|.... ....+...++.+++++.++...
T Consensus 221 ~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-- 288 (339)
T cd08232 221 PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELDLRGSFRF-- 288 (339)
T ss_pred hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceEEEEEecC--
Confidence 32 2222 22 69999999995 678899999999999999985431 1123344456677777766522
Q ss_pred cchHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 168 FDLHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.+.++.+++++++|.+++. +..+++++++.++++.+.++...||+|+++
T Consensus 289 ----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 289 ----DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ----HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 3567888999999998643 567889999999999999888899999874
No 110
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.84 E-value=7.8e-19 Score=141.21 Aligned_cols=199 Identities=18% Similarity=0.205 Sum_probs=151.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.+++++.|||+++.... +++++|+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++|+++++++.
T Consensus 165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~-~lGa~~~i~~~ 243 (373)
T cd08299 165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK-ELGATECINPQ 243 (373)
T ss_pred hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEeccc
Confidence 4588888999999999976655 889999999 9999999999999999 8999999999999998 89999999876
Q ss_pred Cc-ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhh-ccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 88 EE-TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANM-NLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 88 ~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
+. +++.+.+.+.+++++|+++||+|+ ..+..++..+ .++|+++.+|..... ....++.. .+.++.++.++..
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~-~~~~~~~i~~~~~ 318 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINPM-LLLTGRTWKGAVF 318 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCHH-HHhcCCeEEEEEe
Confidence 53 136677777766689999999996 5677766655 579999999975431 11123332 2346778888776
Q ss_pred cCccchHHHHHHHHHHHHHcCCCC--ccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 165 TDHFDLHQDFISMTCDALRAGKIQ--PLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
..+. ....+.++++.+.++.++ +.+..+++++++.+|++.+.+++. .|+++.+
T Consensus 319 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 319 GGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred cCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 5431 124455666777777554 346778899999999999887664 4887753
No 111
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.83 E-value=1.2e-18 Score=137.95 Aligned_cols=189 Identities=24% Similarity=0.302 Sum_probs=152.8
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
+.+++.++..+.|||+++.... .++++|+|+ |++|++++++|+..|++|+++++++++.+.++ ++|++.++++.+.
T Consensus 138 ~~~~~~l~~~~~ta~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 216 (330)
T cd08245 138 LAQAAPLLCAGITVYSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE 216 (330)
T ss_pred HHHhhhhhhhHHHHHHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc
Confidence 4577889999999999997755 899999999 78999999999999999999999999999997 8999888876654
Q ss_pred ccHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 90 TDLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 90 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
..... ..+++|+++||+++ .....++++++++|+++.++..... ....+...++.++.++.++....
T Consensus 217 -~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-- 284 (330)
T cd08245 217 -LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG-- 284 (330)
T ss_pred -chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC--
Confidence 33222 22479999999874 6788999999999999999865321 11223455667788887776544
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
.+.++.+++++.++.+.+ ....++++++.++++.+.++...||+|+
T Consensus 285 ---~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 285 ---RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred ---HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 567888899999999986 4467899999999999999988899875
No 112
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.83 E-value=2.4e-18 Score=135.66 Aligned_cols=195 Identities=26% Similarity=0.406 Sum_probs=158.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+..++.++..+.+||+++.+.. +++++++|+ |++|++++++++..|++|++++++ ++.+.++ ++|.+.+++..
T Consensus 119 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~ 196 (326)
T cd08272 119 MREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYR 196 (326)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecc
Confidence 3467788889999999987766 889999999 899999999999999999999987 8888887 89998888765
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. .+.+.++..+++ ++|+++||+|+......+++++++|+++.++.... ........+++++.++....
T Consensus 197 ~--~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 265 (326)
T cd08272 197 E--TVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLL 265 (326)
T ss_pred h--hHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEccc
Confidence 4 266778887777 89999999999888889999999999999986531 11222335777777766432
Q ss_pred --c----cchHHHHHHHHHHHHHcCCCCccce-eeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 167 --H----FDLHQDFISMTCDALRAGKIQPLED-ISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 167 --~----~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
. +....+.+..+++++.++.+++.++ ..++++++.++++.+.++...+|+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 1 2334667888999999999987755 7889999999999999888889999864
No 113
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.83 E-value=7.7e-19 Score=138.48 Aligned_cols=173 Identities=24% Similarity=0.254 Sum_probs=138.5
Q ss_pred cchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHH
Q 043295 21 TSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLK 97 (223)
Q Consensus 21 ~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~ 97 (223)
.+..++|.++.... +++++|+|+ |++|.+++|+|+..|++|++++.++++.+.++ ++|++.++++.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-------- 209 (319)
T cd08242 139 EPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEAE-------- 209 (319)
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCcccc--------
Confidence 45556776664444 889999999 99999999999999999999999999999999 7999887766431
Q ss_pred HhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHHHH
Q 043295 98 RYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFI 175 (223)
Q Consensus 98 ~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (223)
+++ ++|+++||+|+ ..+...+++++++|+++..+.... ...++...++.++.++.+..... +
T Consensus 210 --~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~--------~ 273 (319)
T cd08242 210 --SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP--------F 273 (319)
T ss_pred --ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc--------H
Confidence 233 89999999987 578889999999999998765432 22445556677788887765443 6
Q ss_pred HHHHHHHHcCCC--CccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 176 SMTCDALRAGKI--QPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 176 ~~~~~~~~~g~i--~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+.+++++++|.+ .+.+...++++++.+||+.+.++. .+|+|++
T Consensus 274 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 274 APALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred HHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 778899999999 455778899999999999998765 4799886
No 114
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.83 E-value=2.6e-18 Score=136.31 Aligned_cols=189 Identities=27% Similarity=0.296 Sum_probs=148.3
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
+++.+ .++.++++++.... +++++|+|+ |.+|.+++|+|+..|++ |+++.+++++.+.++ ++|++.++++.+.
T Consensus 138 ~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~- 214 (334)
T cd08234 138 EAALA-EPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE- 214 (334)
T ss_pred HHhhh-hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-
Confidence 55544 77889999984444 899999999 88999999999999997 888998999999998 8999888887765
Q ss_pred cHHHHHHHhCCCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccc
Q 043295 91 DLKATLKRYFPDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFD 169 (223)
Q Consensus 91 ~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (223)
++... +...++++|+++||+|+ ..+...+++++++|+++.+|..... .....+...++.++.++.+....
T Consensus 215 ~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---- 285 (334)
T cd08234 215 DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFIN---- 285 (334)
T ss_pred CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEeccC----
Confidence 55544 33333489999999985 6788999999999999999875431 11233444555577777776532
Q ss_pred hHHHHHHHHHHHHHcCCCCcc--ceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 170 LHQDFISMTCDALRAGKIQPL--EDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 170 ~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
.+.+++++++++++.+++. +..+++++++.++++.+.+ ...||+|+
T Consensus 286 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 --PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred --HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 3567889999999998753 5677899999999999998 77889986
No 115
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.82 E-value=2e-18 Score=136.47 Aligned_cols=183 Identities=20% Similarity=0.261 Sum_probs=145.7
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.+++++.|||+++.... +++++|+|+ |++|++++++|+..|++|+++++ .+.++ ++|+++++++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~~ 212 (325)
T cd08264 138 DELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYDE 212 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecchH
Confidence 4578889999999999997744 899999999 89999999999999999998873 36676 899988887643
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
..+.+++.+ +++|+++|++|+..+..++++++++|+++.+|.... ....++...+..++.++.++....
T Consensus 213 ---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (325)
T cd08264 213 ---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT-- 281 (325)
T ss_pred ---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC--
Confidence 345566666 679999999999889999999999999999986421 123455666777777887765544
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKK 216 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~ 216 (223)
++.++.+++++... +..+..+++++++++|++.+.++...+|+
T Consensus 282 ---~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 ---RKELLELVKIAKDL--KVKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred ---HHHHHHHHHHHHcC--CceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 46677788888544 44566788999999999999988877775
No 116
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.82 E-value=2.2e-18 Score=136.48 Aligned_cols=198 Identities=24% Similarity=0.280 Sum_probs=147.6
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+++++.++.++.|||+++.... .++++++|+ |++|.+++|+|+..|++|++++. +++.+.++ ++|+.. +++.
T Consensus 114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~ 190 (331)
T cd08273 114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYR 190 (331)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCC
Confidence 3477889999999999998866 889999999 89999999999999999999997 88888887 898653 4544
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCch------------HHHHhh
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNM------------IDIVYK 155 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~ 155 (223)
.. ++... ...++++|+++||+|+.....++++++++|+++.+|.....+. ....++. .....+
T Consensus 191 ~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (331)
T cd08273 191 TK-DWLPA--MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQ--GRRSLAALGSLLARLAKLKLLPTGR 265 (331)
T ss_pred Cc-chhhh--hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCC--ccccccchhhhhhhhhhhcceeccc
Confidence 43 44433 3333489999999999888899999999999999987643211 0001100 011122
Q ss_pred cceEEeeeccCc--cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 156 RIKIQGFLSTDH--FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 156 ~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
..+..+...... +....+.+..+++++.+|.+++.+..+++++++.++++.+.++...||+|+
T Consensus 266 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 266 RATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred eeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 233323222110 233457888999999999999877788999999999999998888899886
No 117
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.82 E-value=7e-18 Score=133.10 Aligned_cols=195 Identities=22% Similarity=0.302 Sum_probs=154.5
Q ss_pred hhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 14 VFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
..++.+++++.|||+++.+.. .+|++++|+ |++|++++++++..|++|+.+. ++.+.+.+. ++|++.+++...
T Consensus 117 ~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~ 194 (325)
T cd08271 117 EEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYND 194 (325)
T ss_pred HHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCC
Confidence 477888999999999998876 899999999 6799999999999999999887 677778887 899988888777
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCc
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDH 167 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (223)
. .+.+.++...++ ++|++++|+++......+.+++++|+++.++..... . ....+.++..+........
T Consensus 195 ~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~ 264 (325)
T cd08271 195 E-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA-------S--PDPPFTRALSVHEVALGAA 264 (325)
T ss_pred c-cHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC-------c--chhHHhhcceEEEEEeccc
Confidence 6 677788887776 899999999987777899999999999998754321 1 1122334444443332221
Q ss_pred ----c----chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 168 ----F----DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 168 ----~----~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
+ ....+.+.+++++++++.+++.....++++++.++++.+.++...+|+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 265 HDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 1 2345667889999999999877667789999999999999888889999864
No 118
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.82 E-value=7.1e-18 Score=135.35 Aligned_cols=185 Identities=22% Similarity=0.295 Sum_probs=143.6
Q ss_pred cchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhCCCeeeecC--CcccHHH
Q 043295 21 TSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLGFDDAFNYK--EETDLKA 94 (223)
Q Consensus 21 ~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~ 94 (223)
.++.++|+++.... .++++|+|+ |++|.+++|+|+..|++ |++++.++++.+.++ ++|++.++++. +. ++.+
T Consensus 165 ~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~ 242 (364)
T PLN02702 165 EPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIE-DVES 242 (364)
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccc-cHHH
Confidence 45566888874444 889999999 99999999999999995 777777888888888 89998887653 23 5666
Q ss_pred HHHHh---CCCCccEEEcCCC-hHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccch
Q 043295 95 TLKRY---FPDGIDVYFDNVG-GEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDL 170 (223)
Q Consensus 95 ~i~~~---~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (223)
.+... +++++|++|||+| +..+...+++++++|+++.+|.... ...........+++++.++...
T Consensus 243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~----- 311 (364)
T PLN02702 243 EVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN------EMTVPLTPAAAREVDVVGVFRY----- 311 (364)
T ss_pred HHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CCcccHHHHHhCccEEEEeccC-----
Confidence 66554 2348999999999 4788999999999999999986532 1123455667788888876543
Q ss_pred HHHHHHHHHHHHHcCCCC--ccceeeecc--CCHHHHHHHhHcCCCcCcEEEE
Q 043295 171 HQDFISMTCDALRAGKIQ--PLEDISNGV--DSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 171 ~~~~~~~~~~~~~~g~i~--~~~~~~~~l--~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
...++.+++++++|.+. +.+..+|++ +++.+|++.+.+++..+|+|+.
T Consensus 312 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 312 -RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred -hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 24567889999999986 345667555 7999999999988888999985
No 119
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.81 E-value=4.4e-18 Score=134.75 Aligned_cols=183 Identities=17% Similarity=0.144 Sum_probs=144.7
Q ss_pred hhhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE 89 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (223)
+.+++++++++.|||+++.... +++++++|+ |++|++++|+++..|++|+++++++++.+.++ ++|++.++++...
T Consensus 143 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 221 (329)
T cd08298 143 DEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDDL 221 (329)
T ss_pred HHHhhHhhhhhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCcc
Confidence 4478899999999999993333 899999999 99999999999999999999999999999997 8999887766432
Q ss_pred ccHHHHHHHhCCCCccEEEcCCC-hHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCcc
Q 043295 90 TDLKATLKRYFPDGIDVYFDNVG-GEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHF 168 (223)
Q Consensus 90 ~~~~~~i~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (223)
.++++|+++++.+ +..+...+++++++|+++.+|.... .....+... +.++..+.++....
T Consensus 222 ----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~~~-- 283 (329)
T cd08298 222 ----------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVANLT-- 283 (329)
T ss_pred ----------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecCCC--
Confidence 1237999999866 4688999999999999999875321 111222222 34555565554333
Q ss_pred chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 169 DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
.+.+..++++++++.+++. ..+++++++.+|++.+.+++..||+|+
T Consensus 284 ---~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 284 ---RQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred ---HHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 5567889999999999874 577899999999999999999999874
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.81 E-value=1.5e-17 Score=131.91 Aligned_cols=204 Identities=24% Similarity=0.362 Sum_probs=158.2
Q ss_pred hhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 14 VFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
.+++.++.++.+||+++.... +++++|+|+ |++|++++|+|+.. +..++... .+++.+.++ ++|++.++++.
T Consensus 114 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~ 191 (337)
T cd08275 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYR 191 (337)
T ss_pred HHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCC
Confidence 467788889999999987766 889999999 89999999999998 44444333 355778887 89998888887
Q ss_pred CcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccc-----------cCCCCchHHHHhhc
Q 043295 88 EETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADAS-----------KRAVPNMIDIVYKR 156 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~ 156 (223)
.. ++.+.++..+++++|+++||+|+......+++++++|+++.+|.....+... ..........+.++
T Consensus 192 ~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (337)
T cd08275 192 TQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISEN 270 (337)
T ss_pred CC-cHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcC
Confidence 76 7888888877668999999999988889999999999999998654321000 00112234567788
Q ss_pred ceEEeeeccCc---cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 157 IKIQGFLSTDH---FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 157 ~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
.++.++..... .......+.++++++.++.+.+.....++++++.++++.+.++...||+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 271 KSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred ceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 88888775432 11223467888899999999888777889999999999999988889999863
No 121
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.80 E-value=4.3e-18 Score=136.01 Aligned_cols=205 Identities=19% Similarity=0.209 Sum_probs=144.0
Q ss_pred hhhhhccccchhhHHHHHHHH--h-hCCCEEEEE---CchHHHHHHHHHHc-CC-eEEEEecCHHHHHHHHHhhCCCeee
Q 043295 13 YVFANGAGTSGFTAYVGFYEI--S-QKGEKVFVS---GAYGHLVGQYAKLG-GC-YVVGSAGTNEKVAILKEKLGFDDAF 84 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~--~-~~g~~vlI~---g~vG~~a~qla~~~-g~-~v~~~~~~~~~~~~~~~~~g~~~~~ 84 (223)
+++++.++.++.|||+++... . ++|++++|+ |++|.+++|+|+.. |. +|+++. ++++.+.++ ++|++.++
T Consensus 125 ~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i 202 (352)
T cd08247 125 LEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFI 202 (352)
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEE
Confidence 447888899999999998876 4 789999999 68999999999987 55 677776 556667777 89999999
Q ss_pred ecCCccc---HHHH-HHHhCCC-CccEEEcCCCh-HHHHHHHHhhc---cCcEEEEEcccccccccccCC-----CCchH
Q 043295 85 NYKEETD---LKAT-LKRYFPD-GIDVYFDNVGG-EMLEAAVANMN---LFGRVAACGVISECADASKRA-----VPNMI 150 (223)
Q Consensus 85 ~~~~~~~---~~~~-i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~-----~~~~~ 150 (223)
++.+. + +... ++..+++ ++|++|||+|+ ......+++++ ++|+++.++.....+...... .....
T Consensus 203 ~~~~~-~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (352)
T cd08247 203 DYDAH-SGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANA 281 (352)
T ss_pred ecCCC-cccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhh
Confidence 87765 4 4444 4444434 99999999998 67888999999 999999875322110000000 00001
Q ss_pred HHHhhcceEEeeeccCc-cchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEEe
Q 043295 151 DIVYKRIKIQGFLSTDH-FDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVRI 220 (223)
Q Consensus 151 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~~ 220 (223)
..+.++..+..+..... .....+.+..+++++.+|.+++.+..+++++++.+|++.+.+++..||+|+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 282 RKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred hhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 11222222222111100 00113567889999999999887778899999999999999988899999864
No 122
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.80 E-value=3.7e-18 Score=136.25 Aligned_cols=202 Identities=22% Similarity=0.334 Sum_probs=145.7
Q ss_pred hhhhhccccchhhHHHHHHHHh--hC----CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QK----GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA 83 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~----g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~ 83 (223)
++.++.+++++.|||+++.+.. .+ |++|+|+ |++|.+++++|+..|++|+++.++ ++.+.++ ++|.+.+
T Consensus 133 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~ 210 (350)
T cd08248 133 HEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDV 210 (350)
T ss_pred HHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceE
Confidence 3478889999999999998776 43 9999999 899999999999999999998865 5667777 8999888
Q ss_pred eecCCcccHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccc-cC--CCC-chHHHHhhcce-
Q 043295 84 FNYKEETDLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADAS-KR--AVP-NMIDIVYKRIK- 158 (223)
Q Consensus 84 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~-~~~~~~~~~~~- 158 (223)
++..+. ++.+.+... +++|+++||+|+.....++++++++|+++.+|......... .. ... ....+......
T Consensus 211 ~~~~~~-~~~~~l~~~--~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (350)
T cd08248 211 IDYNNE-DFEEELTER--GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKS 287 (350)
T ss_pred EECCCh-hHHHHHHhc--CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHH
Confidence 887765 555555432 37999999999988999999999999999998653211000 00 000 00011111100
Q ss_pred E-Eeeec-cCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEEE
Q 043295 159 I-QGFLS-TDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFVR 219 (223)
Q Consensus 159 ~-~g~~~-~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~~ 219 (223)
+ .+... +.......+.+.++++++.+|.+.+.+...++++++.++++.+.++...+|++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 288 LLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 0 00000 0001123567888999999999988777889999999999999988878888863
No 123
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.79 E-value=8.8e-18 Score=129.89 Aligned_cols=188 Identities=23% Similarity=0.225 Sum_probs=141.9
Q ss_pred hhhhccccchhhHHHHHHHHh-hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHHhhC-CCeeeecCC
Q 043295 14 VFANGAGTSGFTAYVGFYEIS-QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKEKLG-FDDAFNYKE 88 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~~~g-~~~~~~~~~ 88 (223)
.+++.+ .++.|||+++.... +++++++|+ |++|.+++|+|+..|++ |+++++++++.+.++ ++| .+.+++..+
T Consensus 75 ~~aa~~-~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~ 152 (277)
T cd08255 75 ERAALT-ALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTA 152 (277)
T ss_pred HHhHHH-HHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccch
Confidence 366666 78999999987544 899999999 99999999999999998 999999999999888 888 455544322
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. .+.+ ++|++|||++. ......+++++++|+++.+|..... .......+..+..++.+.....
T Consensus 153 ~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 217 (277)
T cd08255 153 D---------EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYG 217 (277)
T ss_pred h---------hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeecccc
Confidence 1 1233 89999999885 6788999999999999999875431 1111233444555776665443
Q ss_pred cc-------chHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCC-CcCcEEE
Q 043295 167 HF-------DLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGD-NIGKKFV 218 (223)
Q Consensus 167 ~~-------~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~-~~gk~v~ 218 (223)
.. ....+.++++++++.+|.+++.+...++++++.++++.+.+++ ...|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 218 IGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 20 1123578889999999999887778889999999999998773 4457653
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.78 E-value=2.3e-17 Score=129.11 Aligned_cols=185 Identities=22% Similarity=0.376 Sum_probs=148.7
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
+..++.++..+.++|+++.... .++++++|+ |++|.+++++++..|++|++++.++ +.+.++ ++|.+.+++..
T Consensus 119 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~ 196 (309)
T cd05289 119 FEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYT 196 (309)
T ss_pred HHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCC
Confidence 3467778888999999998876 889999999 7899999999999999999998777 778887 89988888776
Q ss_pred CcccHHHHHHHhCCC-CccEEEcCCChHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 88 EETDLKATLKRYFPD-GIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 88 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
.. ++.+ .+.+ ++|+++||+|+.....++++++++|+++.+|..... .. ..+.++.++.+.....
T Consensus 197 ~~-~~~~----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~--------~~--~~~~~~~~~~~~~~~~ 261 (309)
T cd05289 197 KG-DFER----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPA--------EQ--AAKRRGVRAGFVFVEP 261 (309)
T ss_pred CC-chhh----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcc--------hh--hhhhccceEEEEEecc
Confidence 64 4443 3334 899999999998889999999999999999864321 00 3344566665554432
Q ss_pred ccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 167 HFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
. ...+.+++++++++.+++.+...++++++.++++.+.++...+|+|+
T Consensus 262 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 262 D----GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred c----HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 1 56788899999999998777778999999999999998888888874
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.78 E-value=3.8e-17 Score=128.57 Aligned_cols=191 Identities=23% Similarity=0.323 Sum_probs=141.8
Q ss_pred hhhhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 14 VFANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 14 ~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
++++.+++++.+||+++.... +++++|+|+ |++|++++++|+..|++|++++.+ ++.+.++ ++|.+.+++...
T Consensus 119 ~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~ 196 (319)
T cd08267 119 EEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTT 196 (319)
T ss_pred HHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCC
Confidence 478889999999999998877 899999999 789999999999999999999865 7888887 899988887765
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCChH--HHHHHHHhhccCcEEEEEcccccccccccCCCCc--hHHHHhhcceEEeee
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGGE--MLEAAVANMNLFGRVAACGVISECADASKRAVPN--MIDIVYKRIKIQGFL 163 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~ 163 (223)
. ++. +..+.+ ++|+++||+|+. .....+..++++|+++.+|...... ..... ..........+....
T Consensus 197 ~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 268 (319)
T cd08267 197 E-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLTLGGGGRRLKFFL 268 (319)
T ss_pred C-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchhhccccceEEEEE
Confidence 4 443 334444 899999999953 3334444599999999998754321 00100 011111122222222
Q ss_pred ccCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 164 STDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
... . .+.+.++++++.++.+++.+..+++++++.++++.+.++...+|+++
T Consensus 269 ~~~--~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 269 AKP--N--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred ecC--C--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 211 1 56788899999999998877788999999999999998888888874
No 126
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.77 E-value=9.8e-17 Score=125.82 Aligned_cols=157 Identities=27% Similarity=0.302 Sum_probs=129.8
Q ss_pred hhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEe--cCHHHHHHHHHhhCCCeeeecCC
Q 043295 15 FANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSA--GTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++ ++.++.|||+++.... +++++|+|. |++|.+++|+|+..|++|+.++ .++++.+.++ ++|++.+ ++..
T Consensus 142 ~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~ 218 (306)
T cd08258 142 AAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGE 218 (306)
T ss_pred HHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCc
Confidence 444 8888999999987766 889999999 9999999999999999988774 3455777778 8999888 7776
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. ++.+.+...+++ ++|+++||+|+ ..+...+++++++|+++.+|.... ....++...++.+++++.|+....
T Consensus 219 ~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 219 E-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred C-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEEecCc
Confidence 6 788888887776 89999999975 678889999999999999998652 123456677778999999999876
Q ss_pred ccchHHHHHHHHHHHHHcC
Q 043295 167 HFDLHQDFISMTCDALRAG 185 (223)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~g 185 (223)
++.++.+++++++|
T Consensus 293 -----~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 -----PASWETALRLLASG 306 (306)
T ss_pred -----hHhHHHHHHHHhcC
Confidence 56788899888875
No 127
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.73 E-value=6.6e-18 Score=115.51 Aligned_cols=121 Identities=26% Similarity=0.393 Sum_probs=81.2
Q ss_pred hCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC--hHHH-HHHHHhhccCcEEEEEcccccccccccCCCCchHHH--
Q 043295 78 LGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG--GEML-EAAVANMNLFGRVAACGVISECADASKRAVPNMIDI-- 152 (223)
Q Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-- 152 (223)
||+++++||+.+ ++ ..++++|+||||+| ++.+ ..++++| ++|+++.++. . ......
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~----------~~~~~~~~ 61 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-D----------LPSFARRL 61 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-H----------HHHHHHHH
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-c----------ccchhhhh
Confidence 689999999965 55 22348999999999 7655 7778888 9999999873 1 011111
Q ss_pred HhhcceEEeeec-cCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCCCcCcEEE
Q 043295 153 VYKRIKIQGFLS-TDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGDNIGKKFV 218 (223)
Q Consensus 153 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~v~ 218 (223)
.....++..... ... +...+.++++.+++++|+++|.+..+|||+++.+|++.+.+++..||+||
T Consensus 62 ~~~~~~~~~~~~~~~~-~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 62 KGRSIRYSFLFSVDPN-AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCHHCEEECCC-H--H-HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cccceEEEEEEecCCC-chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 122233322221 110 12456799999999999999999999999999999999999999999997
No 128
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.72 E-value=8.5e-16 Score=118.08 Aligned_cols=146 Identities=31% Similarity=0.429 Sum_probs=122.0
Q ss_pred hhhhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 13 YVFANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 13 ~~~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+++++.++.++.|||+++.... +++++|+|+ |++|++++|+++..|.+|+++++++++.+.++ ++|.+.++++.+
T Consensus 109 ~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~ 187 (271)
T cd05188 109 LEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKE 187 (271)
T ss_pred HHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCc
Confidence 4578888899999999998887 889999999 55999999999999999999999999999998 899888888777
Q ss_pred cccHHHHHHHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccC
Q 043295 89 ETDLKATLKRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTD 166 (223)
Q Consensus 89 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (223)
. +..+.+. ...+ ++|+++|++++ ......+++++++|+++.++...... ........+.++.++.++....
T Consensus 188 ~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 188 E-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP-----PLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred C-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC-----CcccHHHHHhcceEEEEeecCC
Confidence 6 6666666 4444 89999999998 78889999999999999998765421 1222456678899999988765
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.47 E-value=1.8e-12 Score=104.02 Aligned_cols=173 Identities=10% Similarity=0.090 Sum_probs=128.8
Q ss_pred hhHHHHHHHHh---hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHH
Q 043295 24 FTAYVGFYEIS---QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKR 98 (223)
Q Consensus 24 ~ta~~~l~~~~---~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 98 (223)
...+.++.+.. -+|++|+|. |++|+.+++.++..|++|+++..++.+.+.++ .+|++.+ + ..+.+
T Consensus 186 ~s~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-~------~~e~v-- 255 (413)
T cd00401 186 ESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-T------MEEAV-- 255 (413)
T ss_pred hhhHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-c------HHHHH--
Confidence 34455555543 589999999 99999999999999999999999999999998 8888433 1 11222
Q ss_pred hCCCCccEEEcCCChH-HHHHH-HHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHHHHH
Q 043295 99 YFPDGIDVYFDNVGGE-MLEAA-VANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFIS 176 (223)
Q Consensus 99 ~~~~~~d~vid~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (223)
.++|+||+|+|.. .+... ++.++++|.++.+|.. ...++...+..+.+++.++..... ...++
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~ 320 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELP 320 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcC
Confidence 2489999999974 56665 8999999999999853 225777888888898888776531 11233
Q ss_pred --HHHHHHHcCCC---Cccceee-----eccC-CHHHHHHHhHcCCC-cCcEEEEec
Q 043295 177 --MTCDALRAGKI---QPLEDIS-----NGVD-SIPSAFTGFFRGDN-IGKKFVRIA 221 (223)
Q Consensus 177 --~~~~~~~~g~i---~~~~~~~-----~~l~-~~~~a~~~~~~~~~-~gk~v~~~~ 221 (223)
..+.++.+|.+ .+.+.+. ++|+ ++.++++.+.++.. .-|+++.++
T Consensus 321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 58899999988 3334444 5788 99999999987764 347776653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.44 E-value=6.1e-12 Score=103.41 Aligned_cols=147 Identities=14% Similarity=0.081 Sum_probs=106.6
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCc------------ccHHHHHHHh
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEE------------TDLKATLKRY 99 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~------------~~~~~~i~~~ 99 (223)
.++++|+|. |++|+++++.|+.+|++|++++.++++++.++ ++|++.+ +|..+. .++.+..++.
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 478999999 99999999999999999999999999999999 8999854 554331 0233333333
Q ss_pred -CC--CCccEEEcCCChH------H-HHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHh-hcceEEeeeccCcc
Q 043295 100 -FP--DGIDVYFDNVGGE------M-LEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVY-KRIKIQGFLSTDHF 168 (223)
Q Consensus 100 -~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 168 (223)
.+ +++|++|+|+|.+ . .+.+++.++++|+++.+|...+.+. ..+.+...++. +++++.|....+
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~---e~t~~~~~v~~~~gVti~Gv~n~P-- 316 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNC---ELTVPGEVVVTDNGVTIIGYTDLP-- 316 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCc---ccccCccceEeECCEEEEEeCCCc--
Confidence 33 2699999999852 3 4899999999999999998543211 11222334554 788888876433
Q ss_pred chHHHHHHHHHHHHHcCCCCcc
Q 043295 169 DLHQDFISMTCDALRAGKIQPL 190 (223)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~i~~~ 190 (223)
.++..+..+++.++.+...
T Consensus 317 ---~~~p~~As~lla~~~i~l~ 335 (509)
T PRK09424 317 ---SRLPTQSSQLYGTNLVNLL 335 (509)
T ss_pred ---hhHHHHHHHHHHhCCccHH
Confidence 3445558888888877643
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.59 E-value=4.8e-07 Score=74.75 Aligned_cols=104 Identities=19% Similarity=0.192 Sum_probs=79.4
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCc------------ccHHHHHHHh
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEE------------TDLKATLKRY 99 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~------------~~~~~~i~~~ 99 (223)
.++.+++|. |.+|+++++.++.+|++|++.+.++++++.++ ++|++.+ ++..+. +++.+..++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 367899999 99999999999999999999999999999999 8998653 332110 1333333333
Q ss_pred CC---CCccEEEcCC---Ch--H--HHHHHHHhhccCcEEEEEccccccc
Q 043295 100 FP---DGIDVYFDNV---GG--E--MLEAAVANMNLFGRVAACGVISECA 139 (223)
Q Consensus 100 ~~---~~~d~vid~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~ 139 (223)
+. .++|++|+|+ |. + ..+...+.+++|+.++.++...+.+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn 290 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGN 290 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCC
Confidence 33 2799999999 64 2 4677899999999999998765544
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.46 E-value=3.6e-06 Score=65.04 Aligned_cols=167 Identities=15% Similarity=0.128 Sum_probs=98.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC--eEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC--YVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
.++++||.. ++.|..+.++++..|. +|++++.++..++.+++. +|...+- .... ++. .+ ...++.+|+|+
T Consensus 76 ~~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~-d~~-~l-~~~~~~fD~Vi 151 (272)
T PRK11873 76 KPGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLG-EIE-AL-PVADNSVDVII 151 (272)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEc-chh-hC-CCCCCceeEEE
Confidence 789999999 5559988888888775 799999999998888731 3333221 1111 221 11 11223799988
Q ss_pred cCC------C-hHHHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeeccCccchHHHHHHHHHHH
Q 043295 109 DNV------G-GEMLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLSTDHFDLHQDFISMTCDA 181 (223)
Q Consensus 109 d~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 181 (223)
... . ...+..++++|++||+++..+..... ... ....+...+.+...... ....++.++
T Consensus 152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~-----~~~~e~~~~ 217 (272)
T PRK11873 152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-------ELP--EEIRNDAELYAGCVAGA-----LQEEEYLAM 217 (272)
T ss_pred EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-------CCC--HHHHHhHHHHhccccCC-----CCHHHHHHH
Confidence 432 2 24688999999999999987754321 111 11112211111111110 013345556
Q ss_pred HHc-CCCCc--cceeeeccCCHHHHHHHh--HcCCCcCcEEEE
Q 043295 182 LRA-GKIQP--LEDISNGVDSIPSAFTGF--FRGDNIGKKFVR 219 (223)
Q Consensus 182 ~~~-g~i~~--~~~~~~~l~~~~~a~~~~--~~~~~~gk~v~~ 219 (223)
+++ |.... .....++++++.++++.+ .+++..++.+..
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 260 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS 260 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence 665 43322 233456889999999988 665555666544
No 133
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.32 E-value=1.6e-05 Score=64.03 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=70.1
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC--
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV-- 111 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~-- 111 (223)
++.+|+|. |.+|+.+++.++.+|++|+++++++++.+.+.+.++......+.+.+.+.+.+. .+|++|+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI 240 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence 34568888 999999999999999999999999888877764555432222222212333322 489999998
Q ss_pred -Ch--H--HHHHHHHhhccCcEEEEEccccccc
Q 043295 112 -GG--E--MLEAAVANMNLFGRVAACGVISECA 139 (223)
Q Consensus 112 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~ 139 (223)
+. . .....+..+++++.++.++...+.+
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~ 273 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGC 273 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCC
Confidence 32 2 1367778899999999998765544
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.27 E-value=1.7e-05 Score=64.44 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=75.7
Q ss_pred hhHHHHHHHHh---hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHH
Q 043295 24 FTAYVGFYEIS---QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKR 98 (223)
Q Consensus 24 ~ta~~~l~~~~---~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 98 (223)
..+|+++.+.. -.|++|+|. |.+|..+++.++.+|++|+++..++.+...+. ..|+. +. ++.+.+.
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~- 266 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE- 266 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh-
Confidence 44566666663 489999999 99999999999999999999998887766665 55653 22 2222221
Q ss_pred hCCCCccEEEcCCChH-HHH-HHHHhhccCcEEEEEcccc
Q 043295 99 YFPDGIDVYFDNVGGE-MLE-AAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 99 ~~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 136 (223)
++|++++|+|.. .+. ..+..+++++.++.+|...
T Consensus 267 ----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 267 ----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 599999999974 454 6788999999999998654
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.24 E-value=2.5e-05 Score=63.18 Aligned_cols=99 Identities=18% Similarity=0.215 Sum_probs=73.4
Q ss_pred hHHHHHHHHh---hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHh
Q 043295 25 TAYVGFYEIS---QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRY 99 (223)
Q Consensus 25 ta~~~l~~~~---~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 99 (223)
.++.++.+.. ..|++|+|. |.+|..+++.++.+|++|+++..++.+...+. ..|+ .+. +..+.+
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~-~v~------~leeal--- 248 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGF-RVM------TMEEAA--- 248 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCC-EeC------CHHHHH---
Confidence 3444444543 579999999 99999999999999999999988887766666 5665 222 122222
Q ss_pred CCCCccEEEcCCChH-HHH-HHHHhhccCcEEEEEcccc
Q 043295 100 FPDGIDVYFDNVGGE-MLE-AAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 100 ~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 136 (223)
.+.|++|+++|.. .+. ..+..+++++.++.+|...
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 1479999999974 455 4788999999999988643
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.22 E-value=2e-05 Score=64.46 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=74.7
Q ss_pred HHHHHHHHh---hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhC
Q 043295 26 AYVGFYEIS---QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYF 100 (223)
Q Consensus 26 a~~~l~~~~---~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 100 (223)
.+.++.+.. -.|++|+|. |.+|..+++.++.+|++|+++..++.+...+. ..|+..+ +..+.+.
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~vv-------~leEal~--- 308 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQVL-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCeec-------cHHHHHh---
Confidence 355555554 579999999 99999999999999999999998887766666 5666422 2222332
Q ss_pred CCCccEEEcCCChHH--HHHHHHhhccCcEEEEEccc
Q 043295 101 PDGIDVYFDNVGGEM--LEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 101 ~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~ 135 (223)
..|+++++.|... ....+..|++++.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 3899999999753 47899999999999999874
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.22 E-value=2.7e-05 Score=60.76 Aligned_cols=93 Identities=17% Similarity=0.253 Sum_probs=72.0
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
-.+.+++|. |.+|..+++.++..|++|++.++++++.+.++ ++|+..+ ... ++.+.+. ++|+||+|++
T Consensus 150 l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~~---~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 150 IHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HLS---ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cHH---HHHHHhC-----CCCEEEECCC
Confidence 368999999 99999999999999999999999988888888 7886432 111 2222222 4999999997
Q ss_pred hH-HHHHHHHhhccCcEEEEEccccc
Q 043295 113 GE-MLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 113 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
.. .....+..+++++.++.++..++
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence 64 34566788999999999987654
No 138
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.92 E-value=0.00013 Score=48.14 Aligned_cols=93 Identities=23% Similarity=0.266 Sum_probs=64.7
Q ss_pred CCCEEEEE-CchHHHHHHHHH-HcCCeEEEEecCHHHHHHHHHhh---CC-CeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 36 KGEKVFVS-GAYGHLVGQYAK-LGGCYVVGSAGTNEKVAILKEKL---GF-DDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 36 ~g~~vlI~-g~vG~~a~qla~-~~g~~v~~~~~~~~~~~~~~~~~---g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
|+.+||-. .+.|..+..+++ ..+++|++++.+++-.+.+++.. +. +.+ ..... ++ . ......++||+|+.
T Consensus 1 p~~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~-d~-~-~~~~~~~~~D~v~~ 76 (112)
T PF12847_consen 1 PGGRVLDLGCGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRI-TFVQG-DA-E-FDPDFLEPFDLVIC 76 (112)
T ss_dssp TTCEEEEETTTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTE-EEEES-CC-H-GGTTTSSCEEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCe-EEEEC-cc-c-cCcccCCCCCEEEE
Confidence 67889888 889999999999 46889999999999888887544 22 222 12222 33 1 11112237999987
Q ss_pred CC-Ch----H------HHHHHHHhhccCcEEEEE
Q 043295 110 NV-GG----E------MLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 110 ~~-g~----~------~~~~~~~~l~~~G~~v~~ 132 (223)
.. .. . .++...+.|+|+|+++.-
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 77 SGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp CSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 66 21 1 267788899999999864
No 139
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.82 E-value=0.00015 Score=53.92 Aligned_cols=77 Identities=21% Similarity=0.376 Sum_probs=60.4
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC----CeeeecCCcccHHHHHHHhCCC--CccE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF----DDAFNYKEETDLKATLKRYFPD--GIDV 106 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~--~~d~ 106 (223)
+++.++|+ +|+|.+.++.....|++|+.++|+.++++.+..+++. ...+|-.+.......+...... .+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 45678888 8999999999999999999999999999999888883 3345555543444555555554 6999
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
.++..|
T Consensus 85 LvNNAG 90 (246)
T COG4221 85 LVNNAG 90 (246)
T ss_pred EEecCC
Confidence 999887
No 140
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.75 E-value=0.00021 Score=49.17 Aligned_cols=95 Identities=20% Similarity=0.202 Sum_probs=63.0
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCC--eeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFD--DAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
-++.+++|. |++|.+++..+...|+ +|+.+.|+.++.+.+.++++.. .+.++.+ +.+.+. .+|+||+
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~-----~~DivI~ 81 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQ-----EADIVIN 81 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHH-----TESEEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHh-----hCCeEEE
Confidence 578999999 9999999999999999 5999999999888877677432 2344433 222222 3999999
Q ss_pred CCChHHHHHHHHhhccC----cEEEEEccccc
Q 043295 110 NVGGEMLEAAVANMNLF----GRVAACGVISE 137 (223)
Q Consensus 110 ~~g~~~~~~~~~~l~~~----G~~v~~g~~~~ 137 (223)
|++.......-..+... +.++.++.|.+
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~ 113 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAVPRD 113 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-SS-S
T ss_pred ecCCCCcccCHHHHHHHHhhhhceeccccCCC
Confidence 99864221111223333 57888876654
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.71 E-value=0.00042 Score=57.03 Aligned_cols=88 Identities=18% Similarity=0.188 Sum_probs=67.6
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
-.|++++|. |.+|..+++.++..|++|+++.+++.+...+. ..|+..+ ++.+.++ ..|+++.+.|
T Consensus 252 LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~-------~leell~-----~ADIVI~atG 318 (476)
T PTZ00075 252 IAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV-------TLEDVVE-----TADIFVTATG 318 (476)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec-------cHHHHHh-----cCCEEEECCC
Confidence 579999999 99999999999999999999987776654454 4465321 2333232 3899999998
Q ss_pred hH-HH-HHHHHhhccCcEEEEEccc
Q 043295 113 GE-ML-EAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 113 ~~-~~-~~~~~~l~~~G~~v~~g~~ 135 (223)
.. .+ ...+..|++++.++.+|..
T Consensus 319 t~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 319 NKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cccccCHHHHhccCCCcEEEEcCCC
Confidence 64 34 4789999999999999865
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=97.62 E-value=0.00083 Score=58.73 Aligned_cols=102 Identities=21% Similarity=0.232 Sum_probs=67.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC-----CeeeecCCcccHHHHHHHhC--CCCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF-----DDAFNYKEETDLKATLKRYF--PDGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~i~~~~--~~~~d 105 (223)
+|+++||+ |++|..+++.+...|++|+.++++.++.+.+.+.++. ....|-.+.+...+.+.+.. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 56899999 8999999999999999999999998887766534543 11134333312333333322 13799
Q ss_pred EEEcCCCh--------------------------HHHHHHHHhhcc---CcEEEEEccccc
Q 043295 106 VYFDNVGG--------------------------EMLEAAVANMNL---FGRVAACGVISE 137 (223)
Q Consensus 106 ~vid~~g~--------------------------~~~~~~~~~l~~---~G~~v~~g~~~~ 137 (223)
++|++.|. ..++.+++.++. +|+++.++....
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 99999982 012334555555 589999887544
No 143
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.60 E-value=0.0016 Score=51.43 Aligned_cols=92 Identities=22% Similarity=0.203 Sum_probs=64.3
Q ss_pred hhhccccchhhHHHHHHHHh-----hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeec
Q 043295 15 FANGAGTSGFTAYVGFYEIS-----QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNY 86 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-----~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~ 86 (223)
+.+....+..+++.++.... .++.+|+|. |.+|..+++.++..|+ +|+.+.+++++...+.+++|.. +++.
T Consensus 151 et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-~~~~ 229 (311)
T cd05213 151 ETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-AVPL 229 (311)
T ss_pred hcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-EEeH
Confidence 34444556777888876655 268999999 9999999999988776 7888898888764444378873 3332
Q ss_pred CCcccHHHHHHHhCCCCccEEEcCCChHH
Q 043295 87 KEETDLKATLKRYFPDGIDVYFDNVGGEM 115 (223)
Q Consensus 87 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 115 (223)
. ++.+.+. ..|+||.|++.+.
T Consensus 230 ~---~~~~~l~-----~aDvVi~at~~~~ 250 (311)
T cd05213 230 D---ELLELLN-----EADVVISATGAPH 250 (311)
T ss_pred H---HHHHHHh-----cCCEEEECCCCCc
Confidence 1 2333332 3899999999753
No 144
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.60 E-value=0.00076 Score=50.82 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC---Ceee--ecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF---DDAF--NYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~---~~~~--~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++++++|+ |++|..+++.+...|++|+.+++++++.+.+.+.+.. -..+ |..+.+...+.+.+... +++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46799999 8999999999999999999999998877666323321 1222 22332123222222211 3589
Q ss_pred EEEcCCChH------------------------HHHHHHHhhccCcEEEEEccccc
Q 043295 106 VYFDNVGGE------------------------MLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 106 ~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
.++.+.|.. .++..+..++++|+++.++....
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 139 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG 139 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 998888631 13344456667889998886543
No 145
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.60 E-value=0.0017 Score=50.62 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=74.9
Q ss_pred cchhhHHHHHHHHh------hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 21 TSGFTAYVGFYEIS------QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 21 ~~~~ta~~~l~~~~------~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
.+..||..++.... -.+++++|. |.+|.++++.++..|++|++..+++++.+.+. +.|... +++ . ++
T Consensus 129 n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~-~~~--~-~l 203 (287)
T TIGR02853 129 NSIPTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIP-FPL--N-KL 203 (287)
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCee-ecH--H-HH
Confidence 34556666654332 357899999 99999999999999999999999988777666 666432 211 1 22
Q ss_pred HHHHHHhCCCCccEEEcCCChHH-HHHHHHhhccCcEEEEEccccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEM-LEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
.+.+. ..|+|++|+.... -...+..++++..++.++..++
T Consensus 204 ~~~l~-----~aDiVint~P~~ii~~~~l~~~k~~aliIDlas~Pg 244 (287)
T TIGR02853 204 EEKVA-----EIDIVINTIPALVLTADVLSKLPKHAVIIDLASKPG 244 (287)
T ss_pred HHHhc-----cCCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence 22222 4999999987543 2346678888888998886543
No 146
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.57 E-value=0.0013 Score=53.34 Aligned_cols=108 Identities=16% Similarity=0.110 Sum_probs=71.6
Q ss_pred cccchhhHHHHHHHHh--hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHH
Q 043295 19 AGTSGFTAYVGFYEIS--QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKAT 95 (223)
Q Consensus 19 l~~~~~ta~~~l~~~~--~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 95 (223)
+..+....+..+.+.. +++++||-. .|.|..+..+++..|++|++++.+++..+.+++.. ....+..... ++.
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~-- 223 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR-- 223 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh--
Confidence 3333344444443333 789999999 88999999999988999999999999999888333 2111211111 222
Q ss_pred HHHhCCCCccEEEc-----CCCh----HHHHHHHHhhccCcEEEEEc
Q 043295 96 LKRYFPDGIDVYFD-----NVGG----EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 96 i~~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g 133 (223)
.. .+.+|.|+. .+|. ..+..+.+.|+|+|.++...
T Consensus 224 --~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 224 --DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred --hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11 246898863 3443 35778888999999998754
No 147
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.57 E-value=0.0043 Score=43.62 Aligned_cols=109 Identities=16% Similarity=0.174 Sum_probs=69.7
Q ss_pred HHHHHHHHh---hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhC
Q 043295 26 AYVGFYEIS---QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYF 100 (223)
Q Consensus 26 a~~~l~~~~---~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 100 (223)
.+.++.+.. -.|++++|. |-+|.-.++.++.+|++|+++...+-+.-.+. .-|.. +. ...+.+.
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~--- 77 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR--- 77 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT---
T ss_pred HHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh---
Confidence 344444443 689999999 99999999999999999999999887765555 44543 21 2333322
Q ss_pred CCCccEEEcCCChHH--HHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhh
Q 043295 101 PDGIDVYFDNVGGEM--LEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYK 155 (223)
Q Consensus 101 ~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 155 (223)
..|+++.++|... -..-+..|+++..+..+|... ..++...+...
T Consensus 78 --~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d--------~Eid~~~L~~~ 124 (162)
T PF00670_consen 78 --DADIFVTATGNKDVITGEHFRQMKDGAILANAGHFD--------VEIDVDALEAN 124 (162)
T ss_dssp --T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSST--------TSBTHHHHHTC
T ss_pred --hCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCc--------eeEeecccccc
Confidence 3899999999743 356788888888887777432 24555555444
No 148
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.50 E-value=0.00014 Score=62.18 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=69.0
Q ss_pred hhhHHHHHHHH---------------h-hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecC-----------------
Q 043295 23 GFTAYVGFYEI---------------S-QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGT----------------- 67 (223)
Q Consensus 23 ~~ta~~~l~~~---------------~-~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~----------------- 67 (223)
..++.+++.+. . .+|++|+|. |+.|+.+++.++..|++|+++...
T Consensus 107 ~~v~i~~l~r~~~~~~~~~~~~~~~~~~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~ 186 (564)
T PRK12771 107 DAVGINAVERFLGDYAIANGWKFPAPAPDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLP 186 (564)
T ss_pred CCcCHHHHHHHHHHHHHHcCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCC
Confidence 35666777664 1 568999999 999999999999999999888742
Q ss_pred ----HHHHHHHHHhhCCCeeeecCCcccH-HHHHHHhCCCCccEEEcCCChH-HHHHHHHhhccCcEEEEEc
Q 043295 68 ----NEKVAILKEKLGFDDAFNYKEETDL-KATLKRYFPDGIDVYFDNVGGE-MLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 68 ----~~~~~~~~~~~g~~~~~~~~~~~~~-~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g 133 (223)
+.+++.++ ++|++..++.....+. .+.+ ..++|+||+++|.. .....+.....+|.+..++
T Consensus 187 ~~~~~~~l~~~~-~~Gv~~~~~~~~~~~~~~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 187 REVLDAEIQRIL-DLGVEVRLGVRVGEDITLEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred HHHHHHHHHHHH-HCCCEEEeCCEECCcCCHHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 34567777 7898766654331021 1222 12699999999963 2222333334445544443
No 149
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.39 E-value=0.0071 Score=44.42 Aligned_cols=94 Identities=18% Similarity=0.249 Sum_probs=64.6
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCC-CeeeecCCcccHHHHHHHhCCCCccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGF-DDAFNYKEETDLKATLKRYFPDGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~v 107 (223)
.++++|+-. .+.|..++++++..+ .+|++++.+++..+.+++ .+|. +.+..... +..+.+.. ..+.+|.|
T Consensus 39 ~~~~~vlDlG~GtG~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~-~~~~~D~V 115 (198)
T PRK00377 39 RKGDMILDIGCGTGSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFT-INEKFDRI 115 (198)
T ss_pred CCcCEEEEeCCcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhh-cCCCCCEE
Confidence 788999999 666999999998764 589999999988776652 3552 33322111 22222222 22369999
Q ss_pred EcCCCh----HHHHHHHHhhccCcEEEE
Q 043295 108 FDNVGG----EMLEAAVANMNLFGRVAA 131 (223)
Q Consensus 108 id~~g~----~~~~~~~~~l~~~G~~v~ 131 (223)
|...+. ..+..+.+.|+++|+++.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 975542 357788889999999985
No 150
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.37 E-value=0.0014 Score=47.52 Aligned_cols=76 Identities=18% Similarity=0.297 Sum_probs=53.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC--CeeeecCCccc---HHHHHHHhCCCCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF--DDAFNYKEETD---LKATLKRYFPDGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~---~~~~i~~~~~~~~d~v 107 (223)
.|.+|||. +|+|+..++-....|=+|+.+.|++++++.++..... ..+.|-.+.++ +.+.+.+..+ ..+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence 47899999 6889998888888999999999999999999833322 34445544412 3344433322 57888
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+++.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 88776
No 151
>PRK12742 oxidoreductase; Provisional
Probab=97.35 E-value=0.004 Score=46.85 Aligned_cols=100 Identities=17% Similarity=0.218 Sum_probs=61.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEec-CHHHHHHHHHhhCCCee-eecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAG-TNEKVAILKEKLGFDDA-FNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
+++++||+ |++|..+++.....|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+. +++|+++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 46789999 89999999998889999988764 44555554435565322 3333321233333221 369999998
Q ss_pred CChH-----------HH---------------HHHHHhhccCcEEEEEccccc
Q 043295 111 VGGE-----------ML---------------EAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 111 ~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 137 (223)
.|.. .+ ..+...++.+|+++.++....
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 8631 01 123344556789998876543
No 152
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.35 E-value=0.0012 Score=50.90 Aligned_cols=93 Identities=20% Similarity=0.305 Sum_probs=58.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE--
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF-- 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi-- 108 (223)
++|++||-. +|.|..+..+|+..|++|+++..|++..+.+++ +.|...-+..... ++ ++.. +.||.|+
T Consensus 61 ~~G~~vLDiGcGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~----~~~~-~~fD~IvSi 134 (273)
T PF02353_consen 61 KPGDRVLDIGCGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DY----RDLP-GKFDRIVSI 134 (273)
T ss_dssp -TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--G----GG----S-SEEEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ec----cccC-CCCCEEEEE
Confidence 999999999 889999999999999999999999998887763 3344211111111 11 1111 1588763
Q ss_pred ---cCCCh----HHHHHHHHhhccCcEEEEEc
Q 043295 109 ---DNVGG----EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 109 ---d~~g~----~~~~~~~~~l~~~G~~v~~g 133 (223)
+.+|. ..+..+.+.|+|||+++.-.
T Consensus 135 ~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 135 EMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp SEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred echhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 56663 35778889999999987543
No 153
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.35 E-value=0.0076 Score=43.26 Aligned_cols=96 Identities=23% Similarity=0.352 Sum_probs=65.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
++++.++=. .+.|...+++++.. ..+||++.++++..+..++ .||.+.+.--.. +-.+.+.+.. .+|.+|-
T Consensus 33 ~~g~~l~DIGaGtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~--~~daiFI 108 (187)
T COG2242 33 RPGDRLWDIGAGTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP--SPDAIFI 108 (187)
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--CCCEEEE
Confidence 788865555 78899999999554 3499999999887766542 578765432221 1222222221 4888875
Q ss_pred CCCh---HHHHHHHHhhccCcEEEEEcc
Q 043295 110 NVGG---EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 110 ~~g~---~~~~~~~~~l~~~G~~v~~g~ 134 (223)
--|+ ..++.+|..|+++|++|.-..
T Consensus 109 GGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 109 GGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 4443 368899999999999997654
No 154
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.32 E-value=0.0017 Score=49.60 Aligned_cols=77 Identities=18% Similarity=0.269 Sum_probs=56.8
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-----ee--eecCCcccHHHHHHHh-CC-C
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-----DA--FNYKEETDLKATLKRY-FP-D 102 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~~--~~~~~~~~~~~~i~~~-~~-~ 102 (223)
..+.+++|+ +++|...+......|++|+.++|+.++++.+.+++.-. .+ +|..+. +-.+.+.+. .. +
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhcC
Confidence 356899999 89999999999999999999999999998777555421 12 455555 444444432 22 2
Q ss_pred -CccEEEcCCC
Q 043295 103 -GIDVYFDNVG 112 (223)
Q Consensus 103 -~~d~vid~~g 112 (223)
.+|+.+++.|
T Consensus 83 ~~IdvLVNNAG 93 (265)
T COG0300 83 GPIDVLVNNAG 93 (265)
T ss_pred CcccEEEECCC
Confidence 7999999998
No 155
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.31 E-value=0.0014 Score=51.21 Aligned_cols=95 Identities=20% Similarity=0.123 Sum_probs=62.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
.++++||-. +|.|..++.+++ .|+ +|++++.++...+.+++.. +....+..... + ......++||+|+.
T Consensus 158 ~~g~~VLDvGcGsG~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDlVva 231 (288)
T TIGR00406 158 LKDKNVIDVGCGSGILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADVIVA 231 (288)
T ss_pred CCCCEEEEeCCChhHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceEEEE
Confidence 678898888 777988877766 465 8999999988877776322 22111111111 1 11122347999987
Q ss_pred CCChH----HHHHHHHhhccCcEEEEEccc
Q 043295 110 NVGGE----MLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 110 ~~g~~----~~~~~~~~l~~~G~~v~~g~~ 135 (223)
..... .+....++|+++|.++..|..
T Consensus 232 n~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 232 NILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred ecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 65543 456677899999999988754
No 156
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.28 E-value=0.0026 Score=52.42 Aligned_cols=89 Identities=22% Similarity=0.251 Sum_probs=63.1
Q ss_pred hccccchhhHHHHHHHHh-----hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCC
Q 043295 17 NGAGTSGFTAYVGFYEIS-----QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKE 88 (223)
Q Consensus 17 a~l~~~~~ta~~~l~~~~-----~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (223)
+....+..+++.++.... .++++|+|. |.+|..+++.++..|+ +|+.+.++.++.+.+.+++|.+ +++..
T Consensus 157 ~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~- 234 (423)
T PRK00045 157 GIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD- 234 (423)
T ss_pred CCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH-
Confidence 334446677788876554 467899999 9999999999999998 8999999988866444377753 33321
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChH
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGE 114 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~ 114 (223)
++.+.+. ++|+||+|+|++
T Consensus 235 --~~~~~l~-----~aDvVI~aT~s~ 253 (423)
T PRK00045 235 --ELPEALA-----EADIVISSTGAP 253 (423)
T ss_pred --HHHHHhc-----cCCEEEECCCCC
Confidence 2222221 489999999863
No 157
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.27 E-value=0.0043 Score=45.42 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=68.6
Q ss_pred HHHHHh-hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHH----HHHhhCCCeee-ecCCcccHHHHHHHhCC
Q 043295 29 GFYEIS-QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAI----LKEKLGFDDAF-NYKEETDLKATLKRYFP 101 (223)
Q Consensus 29 ~l~~~~-~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~----~~~~~g~~~~~-~~~~~~~~~~~i~~~~~ 101 (223)
++.... +++++||-. ++.|-.++-+++..| +|+.+.+.++=.+. ++ .+|...+. ...+. . .-..+
T Consensus 64 m~~~L~~~~g~~VLEIGtGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~-~lg~~nV~v~~gDG--~----~G~~~ 135 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLE-TLGYENVTVRHGDG--S----KGWPE 135 (209)
T ss_pred HHHHhCCCCCCeEEEECCCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHH-HcCCCceEEEECCc--c----cCCCC
Confidence 344444 999999999 899999999999999 99999987763333 44 67775442 22221 1 11222
Q ss_pred C-CccEEEcCCChH-HHHHHHHhhccCcEEEEEcc
Q 043295 102 D-GIDVYFDNVGGE-MLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 102 ~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~ 134 (223)
. .||.|+=+.+.+ .-+..++.|++||+++..-.
T Consensus 136 ~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 136 EAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 3 799998777654 44677899999999987543
No 158
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0026 Score=49.11 Aligned_cols=74 Identities=23% Similarity=0.364 Sum_probs=52.3
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCcccHHHHHHHhCC--CCccEEEcCC
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDLKATLKRYFP--DGIDVYFDNV 111 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~--~~~d~vid~~ 111 (223)
++++|+ |++|...++.+...|++|++++++.++.+.+. ..+...+ .|..+.+++.+.+..... +++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 468888 89999999988889999999999988777666 4554333 455543233333333322 3699999998
Q ss_pred C
Q 043295 112 G 112 (223)
Q Consensus 112 g 112 (223)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 159
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.007 Score=46.39 Aligned_cols=77 Identities=13% Similarity=0.154 Sum_probs=51.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe-e--eecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD-A--FNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~--~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
.+++++|. |++|...++.....|++|+.++++.++.+.+.++++... . .|..+.+++.+.+.+... +.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46789999 899999998888899999999998877666654555321 1 243333233333333221 268999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 85 v~~ag 89 (261)
T PRK08265 85 VNLAC 89 (261)
T ss_pred EECCC
Confidence 98876
No 160
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0041 Score=48.12 Aligned_cols=76 Identities=18% Similarity=0.327 Sum_probs=53.4
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCcccHHHHHH---HhCCCCccEEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDLKATLK---RYFPDGIDVYF 108 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~---~~~~~~~d~vi 108 (223)
.+++++|+ |++|...++.....|++|+++++++++.+.+. ..+...+ .|..+.+++...+. +..++.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 35788999 89999999888888999999999988887776 5555333 35444312222222 33345799999
Q ss_pred cCCC
Q 043295 109 DNVG 112 (223)
Q Consensus 109 d~~g 112 (223)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 161
>PRK06182 short chain dehydrogenase; Validated
Probab=97.14 E-value=0.0036 Score=48.27 Aligned_cols=76 Identities=24% Similarity=0.373 Sum_probs=53.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCcccHHHHHHHhC--CCCccEEEc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDLKATLKRYF--PDGIDVYFD 109 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~--~~~~d~vid 109 (223)
++++++|+ |++|...++.+...|++|+++++++++.+.+. ..+...+ .|..+.+++...+.+.. .+++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 46788999 89999999988889999999999988876665 4444322 35444423333333332 237999999
Q ss_pred CCC
Q 043295 110 NVG 112 (223)
Q Consensus 110 ~~g 112 (223)
+.|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 887
No 162
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0035 Score=49.09 Aligned_cols=78 Identities=22% Similarity=0.257 Sum_probs=53.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-ee----eecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DA----FNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~----~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++++++|+ |++|..+++.....|++|+.++++.++.+.+.++++.. .+ .|-.+.++....+.+... +++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999 89999999999999999999999988877665466531 11 344433123233333222 3699
Q ss_pred EEEcCCCh
Q 043295 106 VYFDNVGG 113 (223)
Q Consensus 106 ~vid~~g~ 113 (223)
+++++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99998873
No 163
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.13 E-value=0.004 Score=44.94 Aligned_cols=87 Identities=18% Similarity=0.180 Sum_probs=61.1
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
-.|++|.|+ |.+|...++.++.+|++|++.+++........ ..+. .+. ++.+.+.+ .|+|+.+..
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~----~~~---~l~ell~~-----aDiv~~~~p 100 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGV----EYV---SLDELLAQ-----ADIVSLHLP 100 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTE----EES---SHHHHHHH------SEEEE-SS
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhcc-cccc----eee---ehhhhcch-----hhhhhhhhc
Confidence 468999999 99999999999999999999999887655344 4443 111 34444443 788887765
Q ss_pred h-H-----HHHHHHHhhccCcEEEEEcc
Q 043295 113 G-E-----MLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 113 ~-~-----~~~~~~~~l~~~G~~v~~g~ 134 (223)
. + .-...+..|+++..+|-++-
T Consensus 101 lt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 101 LTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred cccccceeeeeeeeeccccceEEEeccc
Confidence 2 2 12467788898888887763
No 164
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.08 E-value=0.0068 Score=46.92 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=72.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC--
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV-- 111 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~-- 111 (223)
.+++.++|- |.+|.-++.+|..+|++|...+.|.+|+..+...++-..-.-+.....+.+.+.+ .|++|.++
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~-----aDlvIgaVLI 241 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKK-----ADLVIGAVLI 241 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhh-----ccEEEEEEEe
Confidence 334444444 8999999999999999999999999999999866665422223332245555443 89998876
Q ss_pred -ChH----HHHHHHHhhccCcEEEEEcccccccc
Q 043295 112 -GGE----MLEAAVANMNLFGRVAACGVISECAD 140 (223)
Q Consensus 112 -g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~ 140 (223)
|.. ..++....|++|+.++.+....+...
T Consensus 242 pgakaPkLvt~e~vk~MkpGsVivDVAiDqGGc~ 275 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPGSVIVDVAIDQGGCF 275 (371)
T ss_pred cCCCCceehhHHHHHhcCCCcEEEEEEEcCCCce
Confidence 221 46778899999999999887665443
No 165
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.00 E-value=0.028 Score=40.91 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=61.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-C-CeEEEEecCHHHHHHHHHhhCCCee-eecCCcccHHHHHHHhCCC-CccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-G-CYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDLKATLKRYFPD-GIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g-~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~-~~d~vid 109 (223)
+++++||.. .|.|..+..+++.. + .+|++++.++.. . ..++..+ .|..+. ...+.+++..++ ++|+|+.
T Consensus 31 ~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~~D~V~~ 104 (188)
T TIGR00438 31 KPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDKVDVVMS 104 (188)
T ss_pred CCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCCccEEEc
Confidence 889999999 77788777777765 3 489999988743 2 2233322 233333 344555555555 8999994
Q ss_pred -CC----C-------------hHHHHHHHHhhccCcEEEEEc
Q 043295 110 -NV----G-------------GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 -~~----g-------------~~~~~~~~~~l~~~G~~v~~g 133 (223)
.. | ...+..+.++|+++|+++...
T Consensus 105 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 105 DAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 21 2 134667788999999998864
No 166
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.99 E-value=0.017 Score=48.04 Aligned_cols=77 Identities=18% Similarity=0.267 Sum_probs=49.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH--HHHHHHHHhhCCCe-eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN--EKVAILKEKLGFDD-AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~--~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
++++++|+ |++|...++.....|++|+.++++. ++.+.+.++++... ..|..+.+.....+..... +++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46889999 8999999999889999999988643 33343433555432 2354443122222222221 269999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
|++.|
T Consensus 289 i~~AG 293 (450)
T PRK08261 289 VHNAG 293 (450)
T ss_pred EECCC
Confidence 99987
No 167
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.99 E-value=0.019 Score=45.50 Aligned_cols=94 Identities=23% Similarity=0.235 Sum_probs=65.2
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC--eEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC--YVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
+++++||.. +|.|..++.+++..+. +|++++.+++..+.+++ .+|.+.+..... +..+.... .+.+|+|+
T Consensus 79 ~~g~~VLDIG~GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~--~~~fD~Ii 154 (322)
T PRK13943 79 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPE--FAPYDVIF 154 (322)
T ss_pred CCCCEEEEEeCCccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhcccc--cCCccEEE
Confidence 788999999 7789999999998864 79999999887666553 356554432221 22222111 12699999
Q ss_pred cCCChH-HHHHHHHhhccCcEEEEE
Q 043295 109 DNVGGE-MLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 109 d~~g~~-~~~~~~~~l~~~G~~v~~ 132 (223)
.+.+-. .....++.|+++|+++..
T Consensus 155 ~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 155 VTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ECCchHHhHHHHHHhcCCCCEEEEE
Confidence 887753 455678899999998763
No 168
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0062 Score=48.50 Aligned_cols=76 Identities=22% Similarity=0.347 Sum_probs=51.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCCe---eeecCCcccHH---HHHHHhCCCC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFDD---AFNYKEETDLK---ATLKRYFPDG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~---~~i~~~~~~~ 103 (223)
++++++|+ |++|.+.++.+...|++|+.+++++++++.+.+ +.|.+. ..|-.+.++.. +.+.+.. ++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG-GR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc-CC
Confidence 46789999 899999999999999999999999887765442 335432 13444331222 2222222 46
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|++|++.|
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 999999987
No 169
>PRK04148 hypothetical protein; Provisional
Probab=96.96 E-value=0.0064 Score=41.41 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=47.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
.++.++++. -|.|...++.....|.+|++++.+++..+.++ +.+...+.+.--..++ .+. +++|+++..-..
T Consensus 15 ~~~~kileIG~GfG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p~~--~~y----~~a~liysirpp 87 (134)
T PRK04148 15 GKNKKIVELGIGFYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNPNL--EIY----KNAKLIYSIRPP 87 (134)
T ss_pred ccCCEEEEEEecCCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCCCH--HHH----hcCCEEEEeCCC
Confidence 456788888 33887556566678999999999999999888 7776444321110011 111 147888877765
Q ss_pred HH
Q 043295 114 EM 115 (223)
Q Consensus 114 ~~ 115 (223)
.-
T Consensus 88 ~e 89 (134)
T PRK04148 88 RD 89 (134)
T ss_pred HH
Confidence 43
No 170
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.94 E-value=0.0076 Score=44.15 Aligned_cols=103 Identities=17% Similarity=0.292 Sum_probs=71.2
Q ss_pred CCCEEEEE----CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC-CeeeecCCccc---HHHHHHHhCCCCccEE
Q 043295 36 KGEKVFVS----GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF-DDAFNYKEETD---LKATLKRYFPDGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~----g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~---~~~~i~~~~~~~~d~v 107 (223)
..+.|||. |++|.+++.-...-|+.|++++++-+..+.+.-++|. .+-+|-.++++ ....+++.+.|..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 45678898 9999999888888999999999998887766546675 33345444312 3445666666789999
Q ss_pred EcCCChH-----------HHHHH----------------HHhhccCcEEEEEcccccc
Q 043295 108 FDNVGGE-----------MLEAA----------------VANMNLFGRVAACGVISEC 138 (223)
Q Consensus 108 id~~g~~-----------~~~~~----------------~~~l~~~G~~v~~g~~~~~ 138 (223)
++..|-+ ..+.+ .-+.+..|++|.+|...+.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~ 143 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV 143 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence 9866632 11111 2355778999998876543
No 171
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.94 E-value=0.0096 Score=44.28 Aligned_cols=100 Identities=14% Similarity=0.075 Sum_probs=63.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeee---------cCCcccHHHHHHHhC---C
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFN---------YKEETDLKATLKRYF---P 101 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~i~~~~---~ 101 (223)
.++.+||+. .|.|.-++-+|. .|.+|++++.|+.-.+.+.++.+...... ..+-+-....+.+.. .
T Consensus 33 ~~~~rvLd~GCG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 111 (213)
T TIGR03840 33 PAGARVFVPLCGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAADL 111 (213)
T ss_pred CCCCeEEEeCCCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcccC
Confidence 577899999 899999999985 69999999999998877543444321100 000000000111111 1
Q ss_pred CCccEEEcCCC---------hHHHHHHHHhhccCcEEEEEccc
Q 043295 102 DGIDVYFDNVG---------GEMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 102 ~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
+.+|.|+|+.. ...+....++|+|||+++..+..
T Consensus 112 ~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 112 GPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 25899999653 13577888999999987766543
No 172
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.93 E-value=0.0068 Score=46.44 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=51.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-ee--eecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DA--FNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
++++++|+ +++|...++.+...|++|+.+++++++.+.+.++++.. .. .|-.+.++....+.+... +.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46789999 79999999888889999999999988877766444431 11 233332123333333222 368999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+++.|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 98887
No 173
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.011 Score=44.54 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=51.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
++++++|+ |++|...++.+...|++|+.++++.++.+.+.+..+...+ .|..+. +......+. .+++|++|++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~-~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD-AAIRAALAA-AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH-HHHHHHHHH-hCCCCEEEECC
Confidence 56789999 7999999999999999999999988777666534454322 344433 222222222 13689999988
Q ss_pred C
Q 043295 112 G 112 (223)
Q Consensus 112 g 112 (223)
|
T Consensus 86 g 86 (245)
T PRK07060 86 G 86 (245)
T ss_pred C
Confidence 7
No 174
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0074 Score=46.00 Aligned_cols=77 Identities=17% Similarity=0.194 Sum_probs=51.7
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe-eeecCCcccHHHHHHHhCC--CCccEEEc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD-AFNYKEETDLKATLKRYFP--DGIDVYFD 109 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid 109 (223)
++++++|. |++|...++.....|++|+.+++++.+.+...++++... ..|..+.+...+.+.+... +++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47899999 899999999988899999999998877665543554422 2344443122222222211 26899998
Q ss_pred CCC
Q 043295 110 NVG 112 (223)
Q Consensus 110 ~~g 112 (223)
+.|
T Consensus 86 ~ag 88 (255)
T PRK06057 86 NAG 88 (255)
T ss_pred CCC
Confidence 876
No 175
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.018 Score=45.98 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCee---eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDA---FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|+ |++|..+++.+...|++|+.+++++++.+.+.++ .|.... .|..+.++..+.+..... +++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 46789999 8999999998888999999999998776554422 343221 344443122222222211 369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++++.|
T Consensus 87 D~lInnAg 94 (334)
T PRK07109 87 DTWVNNAM 94 (334)
T ss_pred CEEEECCC
Confidence 99999887
No 176
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.93 E-value=0.0048 Score=47.44 Aligned_cols=92 Identities=21% Similarity=0.327 Sum_probs=68.2
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCC-ee----eecCCcccHHHHHHHhCCCCcc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFD-DA----FNYKEETDLKATLKRYFPDGID 105 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~~----~~~~~~~~~~~~i~~~~~~~~d 105 (223)
+||++||=. .|-|.+++-.|+..|++|+++.-|+++.+.+++ +.|.. .+ -|+++ + . +.||
T Consensus 71 ~~G~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---~-------~-e~fD 139 (283)
T COG2230 71 KPGMTLLDIGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---F-------E-EPFD 139 (283)
T ss_pred CCCCEEEEeCCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc---c-------c-cccc
Confidence 999999999 899999999999999999999999998877763 23443 11 12222 1 1 1366
Q ss_pred EE-----EcCCCh----HHHHHHHHhhccCcEEEEEccccc
Q 043295 106 VY-----FDNVGG----EMLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 106 ~v-----id~~g~----~~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
-| |+.+|. +.+..+.++|+++|+++.-.....
T Consensus 140 rIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~ 180 (283)
T COG2230 140 RIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP 180 (283)
T ss_pred eeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence 55 456664 357788899999999988776554
No 177
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.90 E-value=0.047 Score=40.58 Aligned_cols=97 Identities=22% Similarity=0.164 Sum_probs=69.7
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCCCe-eeecCCcccHHHHHHHhCCCCccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGFDD-AFNYKEETDLKATLKRYFPDGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~v 107 (223)
.+.++||=. +..|..++.+|..+. .+++++..++++.+.+++ +.|.+. +.-.... +..+.+.+...+.||.|
T Consensus 58 ~~~k~iLEiGT~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~~~~fDli 136 (219)
T COG4122 58 SGPKRILEIGTAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLLDGSFDLV 136 (219)
T ss_pred cCCceEEEeecccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhccCCCccEE
Confidence 677888888 899999999999886 489999999998877764 346544 2211212 45555555334589999
Q ss_pred E-cCCCh---HHHHHHHHhhccCcEEEEE
Q 043295 108 F-DNVGG---EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 108 i-d~~g~---~~~~~~~~~l~~~G~~v~~ 132 (223)
| |+--+ ..++.++++|++||.++.=
T Consensus 137 FIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 137 FIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred EEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 6 44433 3688999999999998753
No 178
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.90 E-value=0.021 Score=42.12 Aligned_cols=97 Identities=22% Similarity=0.160 Sum_probs=67.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc--CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCC----CCc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG--GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFP----DGI 104 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~----~~~ 104 (223)
...++||-. +..|..++.+|+.+ +.+|+++..+++..+.+++ ..|...-+..... +..+.+.++.. +.|
T Consensus 44 ~~~k~vLEIGt~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~~~~~~f 122 (205)
T PF01596_consen 44 TRPKRVLEIGTFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELANDGEEGQF 122 (205)
T ss_dssp HT-SEEEEESTTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHTTTTTSE
T ss_pred cCCceEEEeccccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhccCCCce
Confidence 677899999 89999999999976 5699999999988777763 3455333333322 34444444322 369
Q ss_pred cEEE-cCCCh---HHHHHHHHhhccCcEEEEE
Q 043295 105 DVYF-DNVGG---EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 105 d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~ 132 (223)
|+|| |+--+ .++..++++|++||.++.=
T Consensus 123 D~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 123 DFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp EEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 9985 55543 3678889999999998864
No 179
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.82 E-value=0.0091 Score=45.76 Aligned_cols=77 Identities=22% Similarity=0.226 Sum_probs=51.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-e--eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-D--AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
++++++|. |++|...++.....|++|+.++++.++.+.+.+..+.. . ..|..+.++..+.+.+... +.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46789999 79999999888889999999999887777666333321 1 1233332123333333322 368999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99876
No 180
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=96.79 E-value=0.037 Score=42.24 Aligned_cols=88 Identities=20% Similarity=0.200 Sum_probs=60.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCCC-CccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFPD-GIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi 108 (223)
.++++||-. .|.|..++.+++ .|+ +|++++.++...+.+++.. +....+.... +. .+|+|+
T Consensus 118 ~~~~~VLDiGcGsG~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~------------~~~~fD~Vv 184 (250)
T PRK00517 118 LPGKTVLDVGCGSGILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ------------GDLKADVIV 184 (250)
T ss_pred CCCCEEEEeCCcHHHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc------------CCCCcCEEE
Confidence 678899888 667988876554 566 6999999998888777322 2211011000 11 499998
Q ss_pred cCCChH----HHHHHHHhhccCcEEEEEccc
Q 043295 109 DNVGGE----MLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 109 d~~g~~----~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.....+ .+....+.|+++|.++..|..
T Consensus 185 ani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 185 ANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred EcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 766543 456778899999999988754
No 181
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.011 Score=45.13 Aligned_cols=79 Identities=16% Similarity=0.227 Sum_probs=51.5
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC----eeeecCCcccHHHHHHHhCC--CCcc
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD----DAFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
-++.++||. |++|..+++.+...|++|+.++++++..+.+.+..+-. ...|..+...+.+.+.+..+ +++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 567899999 89999999888889999999999877666555233221 12343333122222222211 2699
Q ss_pred EEEcCCCh
Q 043295 106 VYFDNVGG 113 (223)
Q Consensus 106 ~vid~~g~ 113 (223)
+||.+.|.
T Consensus 89 ~vi~~ag~ 96 (264)
T PRK12829 89 VLVNNAGI 96 (264)
T ss_pred EEEECCCC
Confidence 99988873
No 182
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0079 Score=46.19 Aligned_cols=78 Identities=19% Similarity=0.227 Sum_probs=50.3
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
-++++++|. |++|...++.....|++|+.+++++++.+...+++ +... ..|..+.+++...+.+... ++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 357899999 89999999888889999999998877654433222 2211 1344433233333333322 26
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 899988775
No 183
>PLN02476 O-methyltransferase
Probab=96.76 E-value=0.072 Score=41.19 Aligned_cols=96 Identities=16% Similarity=0.102 Sum_probs=66.6
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhC----CCCc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYF----PDGI 104 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~----~~~~ 104 (223)
.+.++||=. +++|..++.+|+.++ .+|+++..+++..+.+++ +.|...-+..... +..+.+.++. .+.|
T Consensus 117 ~~ak~VLEIGT~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~~~~~~~~F 195 (278)
T PLN02476 117 LGAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMIQNGEGSSY 195 (278)
T ss_pred cCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcccCCCC
Confidence 678888888 899999999999773 489999999988777753 3466433332222 4445554431 2379
Q ss_pred cEEE-cCCCh---HHHHHHHHhhccCcEEEE
Q 043295 105 DVYF-DNVGG---EMLEAAVANMNLFGRVAA 131 (223)
Q Consensus 105 d~vi-d~~g~---~~~~~~~~~l~~~G~~v~ 131 (223)
|.|| |+--. ..++.++++|++||.++.
T Consensus 196 D~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 196 DFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred CEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 9886 44433 367888999999999875
No 184
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.026 Score=42.73 Aligned_cols=78 Identities=18% Similarity=0.240 Sum_probs=49.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-e--eeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-D--AFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|+ |++|...+......|++|+.+++++++.+...+++ +.. . ..|-.+.++....+.+... +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46889999 89999999888889999999998887665443232 321 1 1243333122222222111 369
Q ss_pred cEEEcCCCh
Q 043295 105 DVYFDNVGG 113 (223)
Q Consensus 105 d~vid~~g~ 113 (223)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999998873
No 185
>PRK08017 oxidoreductase; Provisional
Probab=96.74 E-value=0.011 Score=45.06 Aligned_cols=74 Identities=18% Similarity=0.306 Sum_probs=51.9
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCcccH---HHHHHHhCCCCccEEEcC
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDL---KATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~---~~~i~~~~~~~~d~vid~ 110 (223)
++++|+ |++|..+++.....|++|++++++.++.+.++ ..++..+ .|..+.+.+ .+.+.+..++.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 478888 89999999998888999999999998888777 6666433 344433122 233333333468888877
Q ss_pred CC
Q 043295 111 VG 112 (223)
Q Consensus 111 ~g 112 (223)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 66
No 186
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.74 E-value=0.018 Score=47.43 Aligned_cols=84 Identities=23% Similarity=0.299 Sum_probs=57.2
Q ss_pred chhhHHHHHHHH----h-hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHH
Q 043295 22 SGFTAYVGFYEI----S-QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLK 93 (223)
Q Consensus 22 ~~~ta~~~l~~~----~-~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 93 (223)
+...++.++... . .++++|+|. |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .++.. ++.
T Consensus 160 ~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~ 235 (417)
T TIGR01035 160 AVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLE 235 (417)
T ss_pred CcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHH
Confidence 444555554333 2 678899999 9999999999999994 8999999888755443377753 23221 233
Q ss_pred HHHHHhCCCCccEEEcCCChH
Q 043295 94 ATLKRYFPDGIDVYFDNVGGE 114 (223)
Q Consensus 94 ~~i~~~~~~~~d~vid~~g~~ 114 (223)
+.+. ++|+||+|+++.
T Consensus 236 ~~l~-----~aDvVi~aT~s~ 251 (417)
T TIGR01035 236 EYLA-----EADIVISSTGAP 251 (417)
T ss_pred HHHh-----hCCEEEECCCCC
Confidence 3332 499999999863
No 187
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.72 E-value=0.023 Score=42.86 Aligned_cols=97 Identities=23% Similarity=0.259 Sum_probs=69.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhC---CCeeeecCCcccHHHHHHHhCCC-CccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLG---FDDAFNYKEETDLKATLKRYFPD-GIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi 108 (223)
.+|++||=. +|.|-.+..+++..|- +|++++-|+.-++..+++.. ... +.+-. .-++.+. .++ .||+|.
T Consensus 50 ~~g~~vLDva~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~dAe~LP--f~D~sFD~vt 124 (238)
T COG2226 50 KPGDKVLDVACGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GDAENLP--FPDNSFDAVT 124 (238)
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--echhhCC--CCCCccCEEE
Confidence 579999988 9999999999999975 99999999998888875432 221 11111 1222332 233 788887
Q ss_pred cCCCh-------HHHHHHHHhhccCcEEEEEcccc
Q 043295 109 DNVGG-------EMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 109 d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
-+.|- ..+..+.+.|+|+|+++.+....
T Consensus 125 ~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 125 ISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred eeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 66652 26888999999999999887654
No 188
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.012 Score=45.32 Aligned_cols=77 Identities=18% Similarity=0.192 Sum_probs=51.4
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC-CCe-eeecCCcccHHHHHHHhCC--CCccEEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG-FDD-AFNYKEETDLKATLKRYFP--DGIDVYF 108 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vi 108 (223)
.+.+++|+ |++|...++.....|++|+.+++++++.+.+.+.++ ... ..|..+.+++.+.+..... +++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35789999 899999998888889999999999887766543554 221 2344443233332332221 3699999
Q ss_pred cCCC
Q 043295 109 DNVG 112 (223)
Q Consensus 109 d~~g 112 (223)
.+.|
T Consensus 84 ~~ag 87 (273)
T PRK07825 84 NNAG 87 (273)
T ss_pred ECCC
Confidence 9887
No 189
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.70 E-value=0.034 Score=43.56 Aligned_cols=92 Identities=20% Similarity=0.174 Sum_probs=58.4
Q ss_pred CCEEEEE---CchHHHHHHHHH-Hc-CCeEEEEecCHHHHHHHHHhhCC-CeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 37 GEKVFVS---GAYGHLVGQYAK-LG-GCYVVGSAGTNEKVAILKEKLGF-DDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~-~~-g~~v~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
...|+|. +=.+..++...+ .. +.++++.. |....++++ .+|. +.++.|++ |.++.....-+++|+
T Consensus 136 a~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Yd~-------i~~l~~~~~~v~VDf 206 (314)
T PF11017_consen 136 AAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTYDD-------IDSLDAPQPVVIVDF 206 (314)
T ss_pred ccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeehhh-------hhhccCCCCEEEEEC
Confidence 4556666 444555555555 23 45899988 566668998 9998 88888864 233323346789999
Q ss_pred CChH-HHHHHHHhhccCc-EEEEEccccc
Q 043295 111 VGGE-MLEAAVANMNLFG-RVAACGVISE 137 (223)
Q Consensus 111 ~g~~-~~~~~~~~l~~~G-~~v~~g~~~~ 137 (223)
.|+. ........+...- ..+.+|....
T Consensus 207 aG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 207 AGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred CCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 9974 5556666666543 4556665443
No 190
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.012 Score=45.05 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=50.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCCee----eecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFDDA----FNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~~----~~~~~~~~~~~~i~~~~~--~ 102 (223)
.+++++|. +++|.+.++.....|++|+.+++++++.+.+.+++ +...+ .|-.+.++..+.+.+... +
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46789999 79999999988889999999999887765544222 11111 244443123222333222 3
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++++.|
T Consensus 87 ~id~li~~Ag 96 (265)
T PRK07062 87 GVDMLVNNAG 96 (265)
T ss_pred CCCEEEECCC
Confidence 6999999987
No 191
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.69 E-value=0.018 Score=45.63 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=51.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCCe----eeecCCc-ccHHHHHHHhCCC-
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFDD----AFNYKEE-TDLKATLKRYFPD- 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~-~~~~~~i~~~~~~- 102 (223)
.|++++|+ +++|.+.++.....|++|+.+++++++.+.+.+++ +... ..|-.+. .+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 47899999 89999888877778999999999998876654333 1111 2343321 1334445555555
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++++.|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 6779998876
No 192
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.013 Score=44.31 Aligned_cols=77 Identities=16% Similarity=0.186 Sum_probs=50.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee---eecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA---FNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
++++++|. |++|...++.....|++|+.+++++++.+.+.++++.... .|..+.++....+..... +++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46789999 8999999999888999999999887776655545654321 232222122222222211 368999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 85 i~~ag 89 (249)
T PRK06500 85 FINAG 89 (249)
T ss_pred EECCC
Confidence 98886
No 193
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.65 E-value=0.053 Score=40.29 Aligned_cols=93 Identities=18% Similarity=0.142 Sum_probs=62.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCC-CCccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFP-DGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~-~~~d~v 107 (223)
+++++||-. ++.|..+..+++..+ .+|+++..+++-.+.+++. +|...+- .... +... ...+ +.||+|
T Consensus 75 ~~g~~VLdIG~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~-~~~g-d~~~---~~~~~~~fD~I 149 (212)
T PRK13942 75 KEGMKVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVE-VIVG-DGTL---GYEENAPYDRI 149 (212)
T ss_pred CCcCEEEEECCcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEEC-Cccc---CCCcCCCcCEE
Confidence 889999999 899999999998876 5999999998877766643 3443221 1111 1100 0112 379998
Q ss_pred EcCCC-hHHHHHHHHhhccCcEEEEE
Q 043295 108 FDNVG-GEMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 108 id~~g-~~~~~~~~~~l~~~G~~v~~ 132 (223)
+-... .......++.|++||+++..
T Consensus 150 ~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 150 YVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred EECCCcccchHHHHHhhCCCcEEEEE
Confidence 65433 34556778899999998875
No 194
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.65 E-value=0.017 Score=46.72 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=64.8
Q ss_pred CEEEEE--CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhC---C-CeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 38 EKVFVS--GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLG---F-DDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 38 ~~vlI~--g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g---~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
.+|||. |+||+.+++.+.+.| .+|+..+++.++.+.+. ... . ...+|-.+.+.+.+.|++ +|+||+|
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~~-----~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIKD-----FDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHhc-----CCEEEEe
Confidence 468888 999999999988888 69999999999988887 443 2 233454443233333332 6999999
Q ss_pred CChHHHHHHH-HhhccCcEEEEEcccc
Q 043295 111 VGGEMLEAAV-ANMNLFGRVAACGVIS 136 (223)
Q Consensus 111 ~g~~~~~~~~-~~l~~~G~~v~~g~~~ 136 (223)
.........+ .|++.+=.++......
T Consensus 76 ~p~~~~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 76 APPFVDLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred CCchhhHHHHHHHHHhCCCEEEcccCC
Confidence 9976544555 4555565677766543
No 195
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.046 Score=41.35 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=58.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH-HHHHHHHh---hCCCe---eeecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE-KVAILKEK---LGFDD---AFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~-~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++++|+ |++|...++.+...|++|++++++.. +.+.+.++ .+... ..|..+.++....+.+... ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46789999 89999999888888999999887643 33322212 23211 1244443123222332222 26
Q ss_pred ccEEEcCCChH--------------------HHHHHHHhhccCcEEEEEccc
Q 043295 104 IDVYFDNVGGE--------------------MLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 104 ~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~ 135 (223)
+|+++.+.|.. .++.+...+..+|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89888777531 223344455556888888653
No 196
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.63 E-value=0.06 Score=38.70 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=59.6
Q ss_pred EEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCcccHHHHHHHhCCCCccEEEcCCCh--
Q 043295 40 VFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDLKATLKRYFPDGIDVYFDNVGG-- 113 (223)
Q Consensus 40 vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-- 113 (223)
|+|. |.+|..+++.+...|.+|++.++++.+.+. ..+++.+ .|..+ . +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d---~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFD---P-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTC---H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehh---h-hhhhhhhh-hcchhhhhhhhhc
Confidence 5777 889999999999999999999999988765 2233322 23322 2 33333333 59999999982
Q ss_pred ---HHHHHHHHhhccC--cEEEEEcccc
Q 043295 114 ---EMLEAAVANMNLF--GRVAACGVIS 136 (223)
Q Consensus 114 ---~~~~~~~~~l~~~--G~~v~~g~~~ 136 (223)
+......+.++.. .+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 3455566666444 3777776544
No 197
>PRK00811 spermidine synthase; Provisional
Probab=96.62 E-value=0.04 Score=42.93 Aligned_cols=95 Identities=14% Similarity=0.072 Sum_probs=62.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCC--------CeeeecCCcccHHHHHHHhCCCCc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGF--------DDAFNYKEETDLKATLKRYFPDGI 104 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~~i~~~~~~~~ 104 (223)
...++||+. ||.|..+..+++..+. +|+++..+++-.+.+++.+.. ..+ ..... +..+.+.. .++.+
T Consensus 75 ~~p~~VL~iG~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv-~v~~~-Da~~~l~~-~~~~y 151 (283)
T PRK00811 75 PNPKRVLIIGGGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRV-ELVIG-DGIKFVAE-TENSF 151 (283)
T ss_pred CCCCEEEEEecCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCce-EEEEC-chHHHHhh-CCCcc
Confidence 567899999 8889999999987665 899999999888888743321 111 11111 33333433 33479
Q ss_pred cEEEcCC-C----------hHHHHHHHHhhccCcEEEEE
Q 043295 105 DVYFDNV-G----------GEMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 105 d~vid~~-g----------~~~~~~~~~~l~~~G~~v~~ 132 (223)
|+|+--. . .+.+..+.+.|+++|.++.-
T Consensus 152 DvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 152 DVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred cEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9887432 1 12356778899999999864
No 198
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.017 Score=44.18 Aligned_cols=78 Identities=23% Similarity=0.334 Sum_probs=50.9
Q ss_pred hCCCEEEEE---C-chHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh----hCCCee----eecCCcccHHHHHHHhCC-
Q 043295 35 QKGEKVFVS---G-AYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK----LGFDDA----FNYKEETDLKATLKRYFP- 101 (223)
Q Consensus 35 ~~g~~vlI~---g-~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~----~g~~~~----~~~~~~~~~~~~i~~~~~- 101 (223)
.++++++|+ | ++|.++++.+...|++|+.+++++++.+...++ ++...+ .|..+.++....+.+...
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 457899999 4 699999999999999999999888766544322 343222 244433122222322211
Q ss_pred -CCccEEEcCCC
Q 043295 102 -DGIDVYFDNVG 112 (223)
Q Consensus 102 -~~~d~vid~~g 112 (223)
+++|+++.+.|
T Consensus 95 ~g~id~li~~ag 106 (262)
T PRK07831 95 LGRLDVLVNNAG 106 (262)
T ss_pred cCCCCEEEECCC
Confidence 36899999997
No 199
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.013 Score=44.75 Aligned_cols=77 Identities=13% Similarity=0.126 Sum_probs=50.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC-----CC---eeeecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG-----FD---DAFNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g-----~~---~~~~~~~~~~~~~~i~~~~~--~ 102 (223)
.+++++|. |++|..+++.....|++|+.+++++++.+.+.+++. .. ...|..+.+++...+.+... +
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46789999 899999998888899999999998877665543332 11 11233333123333333221 3
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++.+.|
T Consensus 86 ~id~li~~ag 95 (260)
T PRK07063 86 PLDVLVNNAG 95 (260)
T ss_pred CCcEEEECCC
Confidence 6999999887
No 200
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.015 Score=43.48 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=48.6
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee--eecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA--FNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
++++|. |++|...++.....|++|+++++++++.+.++ +++-... .|-.+.+++.+.+....++++|+++.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 467888 88999888887788999999999887766665 4432222 34334312333333333347999998775
No 201
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.013 Score=44.60 Aligned_cols=78 Identities=21% Similarity=0.308 Sum_probs=51.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CC-Cee--eecCCcccHHHHHHHhC--CCC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GF-DDA--FNYKEETDLKATLKRYF--PDG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~-~~~--~~~~~~~~~~~~i~~~~--~~~ 103 (223)
..+++++|. |++|..+++.+...|++|+++++++++.+.+.+.+ +. ..+ .|..+.+++.+.+.+.. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 357899999 89999999888889999999999988776554232 11 112 23333212333232221 136
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 87 ~d~li~~ag 95 (258)
T PRK06949 87 IDILVNNSG 95 (258)
T ss_pred CCEEEECCC
Confidence 899999887
No 202
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.61 E-value=0.024 Score=43.97 Aligned_cols=78 Identities=21% Similarity=0.296 Sum_probs=58.9
Q ss_pred hCCCEEEEE---CchHHHHH-HHHHHcCCeEEEEecCHHHHHHHHHhh----CC---CeeeecCCcccHHHHHHHhCCC-
Q 043295 35 QKGEKVFVS---GAYGHLVG-QYAKLGGCYVVGSAGTNEKVAILKEKL----GF---DDAFNYKEETDLKATLKRYFPD- 102 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~-qla~~~g~~v~~~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~~~~i~~~~~~- 102 (223)
+-|+|.+|. .++|.+-+ ++|+ .|.+|+-++|+++|++.++++. ++ ..++|+.+.+..-+.+++...+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 557899999 78997655 6666 9999999999999998776543 43 2347777763346677777777
Q ss_pred CccEEEcCCCh
Q 043295 103 GIDVYFDNVGG 113 (223)
Q Consensus 103 ~~d~vid~~g~ 113 (223)
.+.+.++++|-
T Consensus 126 ~VgILVNNvG~ 136 (312)
T KOG1014|consen 126 DVGILVNNVGM 136 (312)
T ss_pred ceEEEEecccc
Confidence 88999999983
No 203
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.61 E-value=0.0039 Score=51.82 Aligned_cols=88 Identities=19% Similarity=0.186 Sum_probs=59.1
Q ss_pred hCCCEEE----EE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-eeeecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVF----VS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DAFNYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vl----I~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
++|+.+| |+ |++|.+++|+++..|++|+++...+.+....+ ..+.+ .++|.+.. .+.+.+....
T Consensus 32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~------ 103 (450)
T PRK08261 32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY------ 103 (450)
T ss_pred CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH------
Confidence 6777776 66 89999999999999999999887665443333 33443 45555543 3333333221
Q ss_pred EEcCCChHHHHHHHHhhccCcEEEEEccccc
Q 043295 107 YFDNVGGEMLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 107 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
..+...++.|.++|+++.++....
T Consensus 104 -------~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 104 -------EFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred -------HHHHHHHHhccCCCEEEEEccccc
Confidence 345567778888899998886543
No 204
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.024 Score=43.55 Aligned_cols=77 Identities=22% Similarity=0.333 Sum_probs=50.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCC-e--eeecCCcccHHHHHHHhCC-CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFD-D--AFNYKEETDLKATLKRYFP-DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~i~~~~~-~~~ 104 (223)
++++++|+ +++|.+.++.....|++|+.++++.++.+.+.+++ +.. . ..|-.+.++....+.+... +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 46789999 79999999999999999999999887766554333 221 1 1233333122222332221 369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++++.|
T Consensus 87 D~lv~nag 94 (263)
T PRK08339 87 DIFFFSTG 94 (263)
T ss_pred cEEEECCC
Confidence 99998886
No 205
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.60 E-value=0.12 Score=39.00 Aligned_cols=96 Identities=16% Similarity=0.099 Sum_probs=65.1
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhC----CCCc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYF----PDGI 104 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~----~~~~ 104 (223)
.++++||-. ++.|..++.+++..+ .+|+++..+++..+.+++ +.|...-+..... +..+.+.++. .+.|
T Consensus 67 ~~~~~vLEiGt~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~~~~~~~f 145 (234)
T PLN02781 67 MNAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLNNDPKPEF 145 (234)
T ss_pred hCCCEEEEecCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHhCCCCCCC
Confidence 678888888 788998888888763 499999999988777763 2354322222222 3444444432 2379
Q ss_pred cEEEcCCC-h---HHHHHHHHhhccCcEEEE
Q 043295 105 DVYFDNVG-G---EMLEAAVANMNLFGRVAA 131 (223)
Q Consensus 105 d~vid~~g-~---~~~~~~~~~l~~~G~~v~ 131 (223)
|+||--.. . ..+..+++++++||.++.
T Consensus 146 D~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 146 DFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99974433 2 467788899999998775
No 206
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.015 Score=44.52 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=50.5
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-ee--eecCCcccHHHHHHHhCC--CC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-DA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
-+++++||. |++|...++.....|++|+.+++++++.+.+.+.+ +.. .. .|..+.+.....+.+... ++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357889999 78999999988889999999999887765544232 221 11 344443122222222211 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 88 id~vi~~Ag 96 (263)
T PRK07814 88 LDIVVNNVG 96 (263)
T ss_pred CCEEEECCC
Confidence 999999887
No 207
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.59 E-value=0.061 Score=39.30 Aligned_cols=97 Identities=20% Similarity=0.178 Sum_probs=56.8
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC----CCe-eeecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG----FDD-AFNYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
-++.+++|. |++|...+..+...|++|+.+.++.++.+.+.+.++ ... ..+..+.+++.+.++ +.|+
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~di 100 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADV 100 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCE
Confidence 366789999 789988888877889999999999887766653442 211 122222112222221 4899
Q ss_pred EEcCCChHHH--HHHHHhhccCcEEEEEcccc
Q 043295 107 YFDNVGGEML--EAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 107 vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~ 136 (223)
||.++..... ...-...+++-.++.+..++
T Consensus 101 Vi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~ 132 (194)
T cd01078 101 VFAAGAAGVELLEKLAWAPKPLAVAADVNAVP 132 (194)
T ss_pred EEECCCCCceechhhhcccCceeEEEEccCCC
Confidence 9998875331 11111233333455555544
No 208
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.016 Score=44.80 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=50.7
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe---eeecCCcccHHHHHHHhCC--CCccEEE
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD---AFNYKEETDLKATLKRYFP--DGIDVYF 108 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~vi 108 (223)
+++++|+ |++|.+.++.+...|++|+++++++++.+.+.+..+... ..|..+.+.....+.+... +++|+++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 5678999 899999998888889999999999888776662222211 1244333123333333222 2589999
Q ss_pred cCCCh
Q 043295 109 DNVGG 113 (223)
Q Consensus 109 d~~g~ 113 (223)
.+.|.
T Consensus 84 ~~ag~ 88 (277)
T PRK06180 84 NNAGY 88 (277)
T ss_pred ECCCc
Confidence 98874
No 209
>PLN02366 spermidine synthase
Probab=96.55 E-value=0.05 Score=42.83 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=62.7
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCC-Ceee-----ecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGF-DDAF-----NYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~-~~~~-----~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
...++||+. ||-|..+..+++.-+. +|.++..++.-.+.+++.+.. ...+ ..... +..+.+++..++.+|+
T Consensus 90 ~~pkrVLiIGgG~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCCCE
Confidence 567899999 8889999999888665 788888888777777733321 0001 11111 3333444333347998
Q ss_pred EE-cCCC----------hHHHHHHHHhhccCcEEEEEc
Q 043295 107 YF-DNVG----------GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 107 vi-d~~g----------~~~~~~~~~~l~~~G~~v~~g 133 (223)
|| |+.. .+.+..+.++|+++|.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 86 3322 124678889999999997643
No 210
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.55 E-value=0.044 Score=46.62 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=34.9
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHH
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILK 75 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~ 75 (223)
..|+++||. |++|..+++.+...|++|++++++.++.+.+.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~ 121 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLV 121 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 578889999 89999999888888999999999988765543
No 211
>PRK06196 oxidoreductase; Provisional
Probab=96.55 E-value=0.02 Score=45.19 Aligned_cols=78 Identities=15% Similarity=0.254 Sum_probs=51.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC-CCe-eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG-FDD-AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
-.+++++|+ |++|..++......|++|+.++++.++.+.+.+++. ... ..|-.+.++..+.+.+... +++|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 357899999 899999998888889999999999877665542332 211 1243333123333333322 379999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 104 i~nAg 108 (315)
T PRK06196 104 INNAG 108 (315)
T ss_pred EECCC
Confidence 99886
No 212
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.55 E-value=0.017 Score=43.79 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=50.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC--CC---eeeecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG--FD---DAFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g--~~---~~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++.+++|. |++|..+++.....|++|+.+++++++.+.+.+.+. .. ...|..+.+++...+.+... +++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 45789999 889998888888889999999999887665543433 11 11233333233333332211 2689
Q ss_pred EEEcCCCh
Q 043295 106 VYFDNVGG 113 (223)
Q Consensus 106 ~vid~~g~ 113 (223)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998873
No 213
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.54 E-value=0.14 Score=39.05 Aligned_cols=96 Identities=11% Similarity=0.065 Sum_probs=67.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc--CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhC-----CCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG--GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYF-----PDG 103 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~-----~~~ 103 (223)
.+.++||-. ..+|..++.+|+.. +.+|+++..+++..+.+++ +.|...-++.... +..+.+.++. .+.
T Consensus 78 ~~ak~iLEiGT~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~~~~~~~~ 156 (247)
T PLN02589 78 INAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIEDGKYHGT 156 (247)
T ss_pred hCCCEEEEEeChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHhccccCCc
Confidence 567788888 89999999999876 5699999999887776653 3465333343333 4555555543 147
Q ss_pred ccEEE-cCCCh---HHHHHHHHhhccCcEEEE
Q 043295 104 IDVYF-DNVGG---EMLEAAVANMNLFGRVAA 131 (223)
Q Consensus 104 ~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~ 131 (223)
||+|| |+--. .+++.+++++++||.++.
T Consensus 157 fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 157 FDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred ccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 99996 44433 367788999999998764
No 214
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.53 E-value=0.018 Score=42.32 Aligned_cols=94 Identities=17% Similarity=0.062 Sum_probs=60.1
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
.++.+||-. +|.|..+..+++. |.+|++++.++.-.+.+++. .+...+ ..... ++.+ . ..++.+|+|+..
T Consensus 29 ~~~~~vLDiGcG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~-d~~~-~--~~~~~fD~I~~~ 102 (197)
T PRK11207 29 VKPGKTLDLGCGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVV-DLNN-L--TFDGEYDFILST 102 (197)
T ss_pred CCCCcEEEECCCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEec-Chhh-C--CcCCCcCEEEEe
Confidence 566788888 8889999999875 88999999998877666522 222211 11111 2211 0 112369999864
Q ss_pred CC-----h----HHHHHHHHhhccCcEEEEEcc
Q 043295 111 VG-----G----EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 111 ~g-----~----~~~~~~~~~l~~~G~~v~~g~ 134 (223)
.. . ..+....++|++||.++.+..
T Consensus 103 ~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 103 VVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred cchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 32 1 246677789999999765543
No 215
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.015 Score=44.22 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=50.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.++++||+ |++|...++.....|++|+.++++.++.+.+.+++ +.. ...|..+.++..+.+.+... +++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57889999 79999999888889999999999887766554333 221 11333333133333332221 369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 88 d~lv~~ag 95 (253)
T PRK05867 88 DIAVCNAG 95 (253)
T ss_pred CEEEECCC
Confidence 99998876
No 216
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.015 Score=45.46 Aligned_cols=77 Identities=18% Similarity=0.343 Sum_probs=49.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-ee--eecCCcccHHHHHHHhC--CCCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-DA--FNYKEETDLKATLKRYF--PDGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~i~~~~--~~~~ 104 (223)
.+++++|+ |++|.+.++.+...|++|+.++++.++.+.+.+++ +.. .. .|-.+.+...+.+.... -+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999 89999999888888999999999987766554232 321 11 23333312222222221 1369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 119 d~li~~AG 126 (293)
T PRK05866 119 DILINNAG 126 (293)
T ss_pred CEEEECCC
Confidence 99999987
No 217
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.50 E-value=0.02 Score=42.72 Aligned_cols=97 Identities=15% Similarity=0.067 Sum_probs=60.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeee---------ecCCcccHHHHHHHhC--C-
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAF---------NYKEETDLKATLKRYF--P- 101 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~i~~~~--~- 101 (223)
.++.+||+. .|.|.-+.-+|. .|++|++++.++.-.+.+.++.+..... ...+-+-+...+.+.. .
T Consensus 36 ~~~~rvL~~gCG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~~ 114 (218)
T PRK13255 36 PAGSRVLVPLCGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAADL 114 (218)
T ss_pred CCCCeEEEeCCCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcccC
Confidence 567899999 899999999986 6999999999998777654344432110 0000000000111111 1
Q ss_pred CCccEEEcCCC---------hHHHHHHHHhhccCcEEEEE
Q 043295 102 DGIDVYFDNVG---------GEMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 102 ~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~ 132 (223)
+.+|.|+|... ...+....++|+|||+++.+
T Consensus 115 ~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 115 ADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 25899998653 13577888899999875543
No 218
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.022 Score=43.33 Aligned_cols=76 Identities=14% Similarity=0.263 Sum_probs=48.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe--e--eecCCcccHHHHHHHhCC--CCccE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD--A--FNYKEETDLKATLKRYFP--DGIDV 106 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~i~~~~~--~~~d~ 106 (223)
++++++|+ |++|...++.....|++|+.++++++..+... ++.... . .|-.+.+++.+.+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 57899999 89999999888889999999998876544444 332211 1 233332122222222211 26899
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
++.+.|
T Consensus 93 vi~~ag 98 (255)
T PRK06841 93 LVNSAG 98 (255)
T ss_pred EEECCC
Confidence 999887
No 219
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.018 Score=43.92 Aligned_cols=77 Identities=22% Similarity=0.238 Sum_probs=50.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|. |++|...++.....|++|+.+++++++.+.+.+++ +.. ...|..+.+.+...+.+... +++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 46789999 89999999988889999999999887765554333 221 12333333123332322211 368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 84 d~vi~~ag 91 (258)
T PRK07890 84 DALVNNAF 91 (258)
T ss_pred cEEEECCc
Confidence 99998886
No 220
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.074 Score=40.97 Aligned_cols=74 Identities=16% Similarity=0.193 Sum_probs=47.1
Q ss_pred EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCe----eeecCCcccHHHHHHHhCC--CCccE
Q 043295 39 KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDD----AFNYKEETDLKATLKRYFP--DGIDV 106 (223)
Q Consensus 39 ~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~----~~~~~~~~~~~~~i~~~~~--~~~d~ 106 (223)
+++|+ |++|..+++.+...|++|+.+++++++.+.+.++ .+... ..|..+.++..+.+.+... +++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 67888 8999999998888999999999887765444322 23321 2354443122222222211 36999
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
++.+.|
T Consensus 82 lv~~ag 87 (272)
T PRK07832 82 VMNIAG 87 (272)
T ss_pred EEECCC
Confidence 999887
No 221
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.032 Score=42.48 Aligned_cols=72 Identities=15% Similarity=0.306 Sum_probs=48.6
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCC-ee--eecCCcccHHHHHHHhCCCCccEE
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFD-DA--FNYKEETDLKATLKRYFPDGIDVY 107 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~~~~~i~~~~~~~~d~v 107 (223)
++++||+ |++|..+++.+...|++|+++++++.+.+.+.+. .+.. .+ .|..+. +.+.+...+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence 4578999 8999999999999999999999987766555421 2221 11 233332 23333333479999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
|.+.|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99887
No 222
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.44 E-value=0.064 Score=39.04 Aligned_cols=94 Identities=19% Similarity=0.202 Sum_probs=63.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
+++.+||-. +|.|..+..+++.. +++|++++.+++..+.+++ +.+.+.+ ..... +..+ +.. .+.+|+|+-
T Consensus 44 ~~g~~VLDiGcGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~-d~~~-~~~--~~~fDlV~~ 118 (187)
T PRK00107 44 PGGERVLDVGSGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHG-RAEE-FGQ--EEKFDVVTS 118 (187)
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEec-cHhh-CCC--CCCccEEEE
Confidence 558888888 78898888888755 6799999999887766652 3454432 22222 2222 211 237999986
Q ss_pred CCC-h--HHHHHHHHhhccCcEEEEEc
Q 043295 110 NVG-G--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 ~~g-~--~~~~~~~~~l~~~G~~v~~g 133 (223)
... . ..+..+.+.|+++|+++.+-
T Consensus 119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 119 RAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred ccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 433 2 45778889999999999874
No 223
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.024 Score=43.19 Aligned_cols=77 Identities=22% Similarity=0.333 Sum_probs=49.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|. |++|...++.....|++|+.+++++++.+.+.+++ +... . .|..+.++....+.+... +++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 46788999 79999999888889999999999888766554333 3221 1 233333122222332222 269
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 85 d~li~~ag 92 (254)
T PRK07478 85 DIAFNNAG 92 (254)
T ss_pred CEEEECCC
Confidence 99998886
No 224
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.024 Score=42.53 Aligned_cols=77 Identities=10% Similarity=0.147 Sum_probs=47.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCee-eecCCcccHHHHHHHhCC--CCccE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDA-FNYKEETDLKATLKRYFP--DGIDV 106 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~-~~~~~~~~~~~~i~~~~~--~~~d~ 106 (223)
+++++||+ |++|..+++.....|++|+.+++++.+.....++ .+...+ .|..+..++.+.+.+... +++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 46789999 8999999988888899999999877654322212 222221 233332122222222221 26899
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
++.+.|
T Consensus 86 vi~~ag 91 (239)
T PRK12828 86 LVNIAG 91 (239)
T ss_pred EEECCc
Confidence 998876
No 225
>PRK06484 short chain dehydrogenase; Validated
Probab=96.41 E-value=0.02 Score=48.50 Aligned_cols=77 Identities=25% Similarity=0.354 Sum_probs=53.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe---eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD---AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
++++++|+ +++|.+.++.....|++|+.++++.++.+.+.++++... ..|..+.+++.+.+..... +++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 57889999 889999999988999999999998888776654665422 2344443233333333222 369999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+++.|
T Consensus 84 i~nag 88 (520)
T PRK06484 84 VNNAG 88 (520)
T ss_pred EECCC
Confidence 98876
No 226
>PRK04457 spermidine synthase; Provisional
Probab=96.41 E-value=0.23 Score=38.26 Aligned_cols=96 Identities=10% Similarity=0.087 Sum_probs=65.2
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHHhhCCCe---eeecCCcccHHHHHHHhCCCCccEEE-
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKEKLGFDD---AFNYKEETDLKATLKRYFPDGIDVYF- 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~~~~d~vi- 108 (223)
.++++||+. +|.|..+..+++.. +.+|+++..+++-.+.+++.++... -+..... +..+.+.+. ++.+|+|+
T Consensus 65 ~~~~~vL~IG~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I~~ 142 (262)
T PRK04457 65 PRPQHILQIGLGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVILV 142 (262)
T ss_pred CCCCEEEEECCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEEEE
Confidence 566789999 78899998898877 5699999999998888885454311 1111112 344444432 34799886
Q ss_pred cCCC----------hHHHHHHHHhhccCcEEEEE
Q 043295 109 DNVG----------GEMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 109 d~~g----------~~~~~~~~~~l~~~G~~v~~ 132 (223)
|... .+.+..+.++|+++|.++.-
T Consensus 143 D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 143 DGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred eCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 3321 24577888999999999873
No 227
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.022 Score=42.78 Aligned_cols=77 Identities=18% Similarity=0.305 Sum_probs=49.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC-C--ee--eecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF-D--DA--FNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~-~--~~--~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++.+++|+ |++|..+++.....|++|+++++++.+.+.+.+++.. . .. .|..+..++.+.+..... +++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 45788998 8999999888877899999999988776655434432 1 11 233333233333333221 2699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
++|++.|
T Consensus 85 ~vi~~ag 91 (237)
T PRK07326 85 VLIANAG 91 (237)
T ss_pred EEEECCC
Confidence 9998876
No 228
>PRK09186 flagellin modification protein A; Provisional
Probab=96.39 E-value=0.025 Score=43.01 Aligned_cols=77 Identities=18% Similarity=0.209 Sum_probs=50.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCC---e-eeecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFD---D-AFNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~-~~~~~~~~~~~~~i~~~~~--~ 102 (223)
++++++|. |++|...+......|++|+.+++++++.+.+.+++ +.. . ..|-.+.+.+.+.+.+... +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46889999 79999999888889999999998887765553333 221 1 2244433233333333222 3
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999875
No 229
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.38 E-value=0.053 Score=40.08 Aligned_cols=95 Identities=16% Similarity=0.065 Sum_probs=61.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
.++++||-. +|.|..+..+++..+ .+|++++.+++-.+.+++ ..+....+..... +..+.+. ..+.||+|+
T Consensus 71 ~~~~~VLDiG~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~--~~~~fD~Ii 147 (205)
T PRK13944 71 RPGMKILEVGTGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLE--KHAPFDAII 147 (205)
T ss_pred CCCCEEEEECcCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCc--cCCCccEEE
Confidence 788898888 889999988888774 599999999887666653 2343211111111 1111111 113699988
Q ss_pred cCCCh-HHHHHHHHhhccCcEEEEE
Q 043295 109 DNVGG-EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 109 d~~g~-~~~~~~~~~l~~~G~~v~~ 132 (223)
-+... ......++.|++||+++..
T Consensus 148 ~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 148 VTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EccCcchhhHHHHHhcCcCcEEEEE
Confidence 65553 3456677899999999764
No 230
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.37 E-value=0.12 Score=39.50 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=62.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
.++.+||-. +|.|..+..+++. |.+|++++.+++.++.+++. .|...-+..... +.. .+.....+.+|+|+..
T Consensus 43 ~~~~~vLDiGcG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~-~l~~~~~~~fD~V~~~ 119 (255)
T PRK11036 43 PRPLRVLDAGGGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQ-DIAQHLETPVDLILFH 119 (255)
T ss_pred CCCCEEEEeCCCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHH-HHhhhcCCCCCEEEeh
Confidence 456788877 8999999999885 88999999999988877732 232111111111 121 2222233479998743
Q ss_pred C-----Ch--HHHHHHHHhhccCcEEEEEc
Q 043295 111 V-----GG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 111 ~-----g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
. .. ..+..+.+.|+|||.++.+.
T Consensus 120 ~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 120 AVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred hHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 2 22 35778889999999998653
No 231
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.36 E-value=0.2 Score=37.66 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=58.7
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCH------H-------------HHHHHHH---hhCC-CeeeecCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTN------E-------------KVAILKE---KLGF-DDAFNYKE 88 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~------~-------------~~~~~~~---~~g~-~~~~~~~~ 88 (223)
-+..+|+|. |+||..++....+.|+ ++..++..+ . |.+.+++ .... .++.-.++
T Consensus 28 l~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 28 LKQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred HhhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 355778888 9999999999988888 665555221 1 1111111 1111 11211111
Q ss_pred cccHHHHHHHhCCCCccEEEcCCChH--HHHHHHHhhccCcEEEEEccccc
Q 043295 89 ETDLKATLKRYFPDGIDVYFDNVGGE--MLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 89 ~~~~~~~i~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
. =..+.+.++...++|+|+||+..- .......|.+.+=.++..+..++
T Consensus 108 f-~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 F-ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred h-hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 1 123455666666899999999873 33344446666667777765544
No 232
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.037 Score=41.35 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=48.4
Q ss_pred EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee-eecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 39 KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA-FNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 39 ~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
+++|. |++|...++.....|++|+.+++++++.+.+.++++...+ .|..+.+++.+.+.+.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 47888 7999999988888899999999998887766535554322 34444312333333322 35898888754
No 233
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.34 E-value=0.028 Score=42.82 Aligned_cols=77 Identities=22% Similarity=0.386 Sum_probs=49.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHhC--CCCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRYF--PDGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~~--~~~~ 104 (223)
.++++||+ |++|...++.+...|++|+.+++++++.+.+.+.+ |... . .|..+..++.+.+.+.. -+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999 89999999888888999999998877654433222 2211 1 24443312222232221 1368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|.+.|
T Consensus 89 d~li~~ag 96 (255)
T PRK07523 89 DILVNNAG 96 (255)
T ss_pred CEEEECCC
Confidence 99999887
No 234
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.33 E-value=0.054 Score=36.06 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=62.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHH---hhCCCee--eecCCcccHHHHHHHhCCCCccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKE---KLGFDDA--FNYKEETDLKATLKRYFPDGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~---~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~v 107 (223)
.++++|+-. .+.|..+..+++..+ .+|++++.++...+.+++ .++...+ +..+ ...... ...+.+|+|
T Consensus 18 ~~~~~vldlG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~D~v 92 (124)
T TIGR02469 18 RPGDVLWDIGAGSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD----APEALE-DSLPEPDRV 92 (124)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc----ccccCh-hhcCCCCEE
Confidence 567777777 777999999999874 699999999988777652 2343322 1111 110011 112369999
Q ss_pred EcCCCh----HHHHHHHHhhccCcEEEEEc
Q 043295 108 FDNVGG----EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 108 id~~g~----~~~~~~~~~l~~~G~~v~~g 133 (223)
+-..+. ..++.+.+.|+++|.++...
T Consensus 93 ~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 93 FIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred EECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 865432 35778899999999998653
No 235
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.027 Score=44.49 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=49.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh-----CCC-e--eeecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL-----GFD-D--AFNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~i~~~~~--~ 102 (223)
.+++++|+ +++|.+.++.....|++|+.++++.++.+.+.+++ +.. . ..|-.+.++..+.+.++.. +
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56889999 89999999888888999999999987765443232 111 1 1243333122222222221 3
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++++.|
T Consensus 93 ~iD~li~nAG 102 (313)
T PRK05854 93 PIHLLINNAG 102 (313)
T ss_pred CccEEEECCc
Confidence 6899998876
No 236
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.32 E-value=0.035 Score=45.56 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=61.1
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
-.+.+++|. |++|.+++..+...|+ +++.+.++.++.+.+.++++...+..+. ++.+.+. .+|+||.|+
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~aT 250 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAAV 250 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEECc
Confidence 567899999 9999999999988997 7888899988776666466522232221 2222221 399999999
Q ss_pred ChHHHHHHHHhhccC-cEEEEEcccccc
Q 043295 112 GGEMLEAAVANMNLF-GRVAACGVISEC 138 (223)
Q Consensus 112 g~~~~~~~~~~l~~~-G~~v~~g~~~~~ 138 (223)
+++..--....++.. =.++.++.|.+-
T Consensus 251 ~a~~~vi~~~~~~~~~~~~iDLavPRdi 278 (414)
T PRK13940 251 NVLEYIVTCKYVGDKPRVFIDISIPQAL 278 (414)
T ss_pred CCCCeeECHHHhCCCCeEEEEeCCCCCC
Confidence 975321111222211 245777776553
No 237
>PRK06484 short chain dehydrogenase; Validated
Probab=96.29 E-value=0.026 Score=47.87 Aligned_cols=102 Identities=20% Similarity=0.216 Sum_probs=67.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe---eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD---AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
.++++||+ +++|...++.....|++|+.++++.++.+.+.++++... ..|..+.++....+.+... +.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46788999 899999998888899999999999888877764555432 2344443233333333322 369999
Q ss_pred EcCCChH------------HH---------------HHHHHhhccCcEEEEEccccc
Q 043295 108 FDNVGGE------------ML---------------EAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 108 id~~g~~------------~~---------------~~~~~~l~~~G~~v~~g~~~~ 137 (223)
+.+.|.. .+ +.++..+..+|+++.++....
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9987721 11 122345556799998886554
No 238
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.048 Score=40.59 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=49.5
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-eeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
++++|+ |++|...++.....|++|+.++++.++.+.++ ..+.. ...|-.+.+.+...+.+..++++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 467888 89999888877778999999999888777776 55543 22344443123222223333379999987763
No 239
>PRK05717 oxidoreductase; Validated
Probab=96.29 E-value=0.034 Score=42.38 Aligned_cols=78 Identities=18% Similarity=0.240 Sum_probs=50.0
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe---eeecCCcccHHHHHHHhCC--CCccE
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD---AFNYKEETDLKATLKRYFP--DGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~ 106 (223)
..+++++|+ |++|..++......|++|+.++++..+.+.+.++++... ..|..+.++..+.+.+... +.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 357889999 899999988888889999999888766555442444321 1333333123222333322 25899
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
++.+.|
T Consensus 88 li~~ag 93 (255)
T PRK05717 88 LVCNAA 93 (255)
T ss_pred EEECCC
Confidence 998887
No 240
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.28 E-value=0.03 Score=44.54 Aligned_cols=92 Identities=9% Similarity=0.058 Sum_probs=60.0
Q ss_pred hCCCEEEEE--CchHHHHHHH-HHHcCC-eEEEEecCHHHHHHHHHhh----CCCeeeecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS--GAYGHLVGQY-AKLGGC-YVVGSAGTNEKVAILKEKL----GFDDAFNYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~ql-a~~~g~-~v~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
+..++++|. |..|...+.. +...++ +|....+++++.+.+.+++ +.. +..+. ++.+.++ ..|+
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aDi 195 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EADI 195 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCCE
Confidence 556788888 8888766644 445677 7888888888766555333 332 11222 3333332 4899
Q ss_pred EEcCCChHHHHHHHHhhccCcEEEEEcccc
Q 043295 107 YFDNVGGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 107 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
|+.|+++...... +.+++|-.+..+|...
T Consensus 196 Vi~aT~s~~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 196 IVTVTNAKTPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence 9999987433334 7889988888888643
No 241
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.058 Score=41.83 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=66.4
Q ss_pred hccccchhhHHHHHHHHh--hCCCEEEEE--Cc-hHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCccc
Q 043295 17 NGAGTSGFTAYVGFYEIS--QKGEKVFVS--GA-YGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETD 91 (223)
Q Consensus 17 a~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~-vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 91 (223)
.-+||+....+..+.... -.|++++|. |. +|.-+++++...|++|+...+... +
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~ 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence 345666666666666665 789999999 55 999999999999999998774321 2
Q ss_pred HHHHHHHhCCCCccEEEcCCChH-HHHHHHHhhccCcEEEEEcccc
Q 043295 92 LKATLKRYFPDGIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 92 ~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
+.+.+++ .|+||.++|.+ .+.. +.++++..++.+|...
T Consensus 195 l~~~~~~-----ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 MASYLKD-----ADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHHhh-----CCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 2222222 89999999975 3333 4588899999998754
No 242
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.04 Score=42.07 Aligned_cols=75 Identities=19% Similarity=0.336 Sum_probs=48.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCC-ee--eecCCcccHHHHHHHhCCCCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFD-DA--FNYKEETDLKATLKRYFPDGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~i~~~~~~~~d 105 (223)
.+++++|. +++|...++.....|++|+.+++++++.+.+.+++ +.. .. .|-.+.++..+.+.+. +.+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 46789999 79999999888889999999999887765544233 221 12 2333321222222221 3699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 84 ~lv~~ag 90 (259)
T PRK06125 84 ILVNNAG 90 (259)
T ss_pred EEEECCC
Confidence 9999876
No 243
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.041 Score=41.66 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=49.4
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCe---eeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDD---AFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|. |++|..+++.+...|++|+.+++++.+.+...++ .+... ..|-.+.+...+.+..... +++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999 8999999998888999999999887765544322 23321 1232232122222333222 368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|.+|.+.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 244
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.25 E-value=0.04 Score=43.65 Aligned_cols=77 Identities=12% Similarity=0.182 Sum_probs=50.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC---C-ee--eecCCcccHHHHHHHhC--CCCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF---D-DA--FNYKEETDLKATLKRYF--PDGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~---~-~~--~~~~~~~~~~~~i~~~~--~~~~ 104 (223)
++++++|+ |++|...++.....|++|+.++++.++.+.+.++++. . .. .|-.+.++..+.+.+.. .+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 46789999 8999999988888899999999988876655434421 1 11 23333212222232221 2369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999877
No 245
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.03 Score=42.59 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=48.6
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-eee--ecCCcccHHHHHHHhCC--CCcc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-DAF--NYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~~--~~~~~~~~~~~i~~~~~--~~~d 105 (223)
+++++|. |++|...++.....|++|+.+++++++.+.+.+++ +.. ..+ |-.+.++..+.+.+... +++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 4678898 89999999998889999999998887665544232 221 122 33333123332322221 3689
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++++.|
T Consensus 81 ~lI~~ag 87 (252)
T PRK07677 81 ALINNAA 87 (252)
T ss_pred EEEECCC
Confidence 9998886
No 246
>PLN02253 xanthoxin dehydrogenase
Probab=96.19 E-value=0.042 Score=42.50 Aligned_cols=77 Identities=16% Similarity=0.168 Sum_probs=49.4
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC--C-e--eeecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF--D-D--AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
.+++++|. |++|.+.++.....|++|+.+++++++.+.+.++++. . . ..|-.+.+...+.+.+... +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999 8999999988888899999999887665544434432 1 1 1344433123332332222 3699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++++.|
T Consensus 97 ~li~~Ag 103 (280)
T PLN02253 97 IMVNNAG 103 (280)
T ss_pred EEEECCC
Confidence 9999876
No 247
>PRK00536 speE spermidine synthase; Provisional
Probab=96.19 E-value=0.037 Score=42.40 Aligned_cols=97 Identities=11% Similarity=-0.017 Sum_probs=65.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC-CeeeecCCcccHHHHHHHhCCCCccEEE-cCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF-DDAFNYKEETDLKATLKRYFPDGIDVYF-DNV 111 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vi-d~~ 111 (223)
...++|||. ||=|.++-.++|.-. +|+.+.-.++-.+.+++-+.. ...++...- .+...+.+...+.+|+|| |+.
T Consensus 71 ~~pk~VLIiGGGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvDs~ 148 (262)
T PRK00536 71 KELKEVLIVDGFDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICLQE 148 (262)
T ss_pred CCCCeEEEEcCCchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEcCC
Confidence 667999999 999999999999865 999999888877888731321 112222222 222233333334799875 644
Q ss_pred Ch-HHHHHHHHhhccCcEEEEEc
Q 043295 112 GG-EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 112 g~-~~~~~~~~~l~~~G~~v~~g 133 (223)
-. +.+..+.++|+++|.++.=+
T Consensus 149 ~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 149 PDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred CChHHHHHHHHhcCCCcEEEECC
Confidence 43 56788999999999998744
No 248
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.032 Score=43.18 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=49.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+++++|+ |++|.+.++.....|++|+.++++..+.+.+.+++ |... ..|-.+.+++.+.+.+... +++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999 89999999888889999999998877665443233 3211 1233333122222222211 368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++++.|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999887
No 249
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.068 Score=40.25 Aligned_cols=77 Identities=17% Similarity=0.264 Sum_probs=50.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CC-C---eeeecCC---c--ccHHHHHHHhC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GF-D---DAFNYKE---E--TDLKATLKRYF 100 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~-~---~~~~~~~---~--~~~~~~i~~~~ 100 (223)
++++++|. |++|...++.....|++|+.+++++++.+.+.+++ +. . ...|..+ . ..+.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 46789999 89999999888888999999999987765543232 21 1 1123221 1 12333444444
Q ss_pred CCCccEEEcCCC
Q 043295 101 PDGIDVYFDNVG 112 (223)
Q Consensus 101 ~~~~d~vid~~g 112 (223)
.+.+|+++.+.|
T Consensus 85 ~~~id~vi~~ag 96 (239)
T PRK08703 85 QGKLDGIVHCAG 96 (239)
T ss_pred CCCCCEEEEecc
Confidence 346899998887
No 250
>PRK09242 tropinone reductase; Provisional
Probab=96.17 E-value=0.034 Score=42.39 Aligned_cols=78 Identities=21% Similarity=0.299 Sum_probs=49.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh-----CCCe---eeecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL-----GFDD---AFNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~i~~~~~--~ 102 (223)
.+++++|. |++|...++.....|++|+.++++.++.+.+.+++ +... ..|..+.++....+.+... +
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57889999 79999999888889999999999887765544232 2111 1233332122222222211 3
Q ss_pred CccEEEcCCCh
Q 043295 103 GIDVYFDNVGG 113 (223)
Q Consensus 103 ~~d~vid~~g~ 113 (223)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 69999999873
No 251
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.15 E-value=0.077 Score=37.88 Aligned_cols=93 Identities=16% Similarity=0.064 Sum_probs=62.2
Q ss_pred hccccchhhHHHHHHHHh--hCCCEEEEE--Cc-hHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCccc
Q 043295 17 NGAGTSGFTAYVGFYEIS--QKGEKVFVS--GA-YGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETD 91 (223)
Q Consensus 17 a~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~-vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 91 (223)
...|+....+...+.... -.+.+|+|. |. +|..++..++..|++|+.+.++.+ +
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~ 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------N 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------h
Confidence 445555555665555554 688999999 65 588888998889999888776521 2
Q ss_pred HHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccc
Q 043295 92 LKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 92 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
+.+.+++ +|+||.+++.+.+ -..+.++++-.++.++.+.
T Consensus 81 l~~~l~~-----aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 81 LKEHTKQ-----ADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred HHHHHhh-----CCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 2222222 8999999987542 2223567777778888765
No 252
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.052 Score=41.44 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=49.2
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-e----eeecCCcccHHHHHHHhCC--CCccE
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-D----AFNYKEETDLKATLKRYFP--DGIDV 106 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~----~~~~~~~~~~~~~i~~~~~--~~~d~ 106 (223)
+.+++|+ |++|...++.....|++|+.+++++++.+.+.+++... . ..|-.+.+++.+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4678999 89999999888888999999999888776555333211 1 1333333233333333222 25899
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
++.+.|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 998876
No 253
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.13 E-value=0.044 Score=38.34 Aligned_cols=93 Identities=25% Similarity=0.183 Sum_probs=59.0
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCCCe-eeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGFDD-AFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
.++.+++|. |.+|...++.....| .+|+.+++++++.+.+.++++... ..+.. +..+.+ +++|+|+.|
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIINT 88 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEeC
Confidence 457888888 888988888888776 689999988887766553665421 01111 222211 259999999
Q ss_pred CChHHH-----HHHHHhhccCcEEEEEccc
Q 043295 111 VGGEML-----EAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 111 ~g~~~~-----~~~~~~l~~~G~~v~~g~~ 135 (223)
++.... ......++++..++.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 89 TPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 886432 1122346777777777653
No 254
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.052 Score=41.47 Aligned_cols=76 Identities=21% Similarity=0.329 Sum_probs=50.6
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe----eeecCCcccHHHHHHHh---CCCCccEE
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD----AFNYKEETDLKATLKRY---FPDGIDVY 107 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~---~~~~~d~v 107 (223)
+++||. |++|...++.....|++|+.++++.++.+.+.+.++... ..|-.+.+++.+.+... ..+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 468888 899999998888889999999999888776653443111 23444432333333322 13479999
Q ss_pred EcCCCh
Q 043295 108 FDNVGG 113 (223)
Q Consensus 108 id~~g~ 113 (223)
+.+.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 998873
No 255
>PRK06194 hypothetical protein; Provisional
Probab=96.12 E-value=0.036 Score=43.01 Aligned_cols=78 Identities=13% Similarity=0.216 Sum_probs=48.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhC--CCCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYF--PDGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~ 104 (223)
.++++||+ |++|..+++.....|++|+.++++.++.+...+++ +... ..|..+.+++.+.+.... .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999 79999999888888999999998876655443233 3221 123333212222222221 1368
Q ss_pred cEEEcCCCh
Q 043295 105 DVYFDNVGG 113 (223)
Q Consensus 105 d~vid~~g~ 113 (223)
|+++.+.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999998873
No 256
>PLN02244 tocopherol O-methyltransferase
Probab=96.12 E-value=0.034 Score=44.51 Aligned_cols=96 Identities=13% Similarity=0.114 Sum_probs=62.4
Q ss_pred CCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 36 KGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 36 ~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
++++||=. .|.|..+..+++..|++|++++.++...+.+++. .|...-+..... +..+ + .+..+.||+|+..-
T Consensus 118 ~~~~VLDiGCG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~s~~ 194 (340)
T PLN02244 118 RPKRIVDVGCGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVWSME 194 (340)
T ss_pred CCCeEEEecCCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEEECC
Confidence 56788777 8899999999998899999999999877766521 233111111111 1100 0 11123699997533
Q ss_pred C-----h--HHHHHHHHhhccCcEEEEEcc
Q 043295 112 G-----G--EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 112 g-----~--~~~~~~~~~l~~~G~~v~~g~ 134 (223)
. . ..+..+.+.|++||+++....
T Consensus 195 ~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 195 SGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred chhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 2 1 357788899999999988754
No 257
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.11 E-value=0.15 Score=37.93 Aligned_cols=94 Identities=19% Similarity=0.146 Sum_probs=61.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC--eEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC--YVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
+++++||-. +|.|..+..+++..+. +|++++.+++-.+.+++ ++|.+.+--... +..+... ..+.||+|+
T Consensus 76 ~~~~~VLDiG~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~--d~~~~~~--~~~~fD~Ii 151 (215)
T TIGR00080 76 KPGMKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG--DGTQGWE--PLAPYDRIY 151 (215)
T ss_pred CCcCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC--CcccCCc--ccCCCCEEE
Confidence 889999988 8999999999998754 79999999887766653 334433211111 1111110 112699887
Q ss_pred cCCC-hHHHHHHHHhhccCcEEEEE
Q 043295 109 DNVG-GEMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 109 d~~g-~~~~~~~~~~l~~~G~~v~~ 132 (223)
-... ........+.|++||+++..
T Consensus 152 ~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 152 VTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EcCCcccccHHHHHhcCcCcEEEEE
Confidence 4433 34456678899999998864
No 258
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.043 Score=41.57 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=48.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+++++|+ |++|...++.....|++|+.+++++++.+.+.+.+ +.. ...|..+..+....+.+... +++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46788999 89999999888888999999998876654443222 211 12333332122222222211 269
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|.+.|
T Consensus 85 d~vi~~ag 92 (250)
T PRK07774 85 DYLVNNAA 92 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 259
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.07 E-value=0.049 Score=41.51 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=50.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe---eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD---AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
.+++++|. |++|...++.....|++|+.++++.++.+.+.++++... ..|-.+.++....+.+... +++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45789999 899999998888889999999999887766654444211 1233332122222222211 368999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 85 i~~ag 89 (257)
T PRK07067 85 FNNAA 89 (257)
T ss_pred EECCC
Confidence 98876
No 260
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.07 E-value=0.043 Score=41.54 Aligned_cols=76 Identities=18% Similarity=0.280 Sum_probs=47.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHH--HHHHHHhhCCC-e--eeecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEK--VAILKEKLGFD-D--AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~--~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
.+++++|. |++|...++.....|++|+.++++... .+.+. +++.. . ..|..+.+++...+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47889999 799999998888889999999976521 22333 34432 1 1333333233333333222 3699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9998876
No 261
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.07 E-value=0.064 Score=39.77 Aligned_cols=100 Identities=19% Similarity=0.155 Sum_probs=62.8
Q ss_pred HHHHHh-hCCCEEEEE-CchHHHHHHHHHHcCC--eEEEEecCHHHHHHHHH---hhCCCee-eecCCcccHHHHHHHhC
Q 043295 29 GFYEIS-QKGEKVFVS-GAYGHLVGQYAKLGGC--YVVGSAGTNEKVAILKE---KLGFDDA-FNYKEETDLKATLKRYF 100 (223)
Q Consensus 29 ~l~~~~-~~g~~vlI~-g~vG~~a~qla~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~i~~~~ 100 (223)
++.... ++|++||-. ++.|-.++-+++..|. +|+++...+.=.+.+++ .+|.+.+ +...+. . .... .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg--~-~g~~--~ 138 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG--S-EGWP--E 138 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G--G-GTTG--G
T ss_pred HHHHHhcCCCCEEEEecCCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch--h-hccc--c
Confidence 344444 999999999 8899999999999885 69999988764444442 4565433 222221 1 0111 1
Q ss_pred CCCccEEEcCCCh-HHHHHHHHhhccCcEEEEEc
Q 043295 101 PDGIDVYFDNVGG-EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 101 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 133 (223)
.++||.|+-+.+- ..-...++.|++||++|..-
T Consensus 139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi 172 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPI 172 (209)
T ss_dssp G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEE
T ss_pred CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEE
Confidence 1279999877764 44567888999999998743
No 262
>PRK08643 acetoin reductase; Validated
Probab=96.05 E-value=0.038 Score=42.09 Aligned_cols=76 Identities=16% Similarity=0.216 Sum_probs=48.3
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CCcc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
+++++|. |++|...++.....|++|+.+++++++.+.+.+++ +... ..|..+.+...+.+.+... +++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5678888 89999999888888999999998887665544232 2211 1233333122222322221 3689
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 82 ~vi~~ag 88 (256)
T PRK08643 82 VVVNNAG 88 (256)
T ss_pred EEEECCC
Confidence 9999886
No 263
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.05 E-value=0.025 Score=47.60 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=50.5
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
.++++|+|+ |..|++++++++..|++|++.+.++.+.+.++ ++|+..+ ... ...+.+. .+|+|+.+.|
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~~~-~~~---~~~~~l~-----~~D~VV~SpG 79 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVATV-STS---DAVQQIA-----DYALVVTSPG 79 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCEEE-cCc---chHhHhh-----cCCEEEECCC
Confidence 567899999 99999999999999999999997766666666 6776332 221 1122221 3799999888
Q ss_pred h
Q 043295 113 G 113 (223)
Q Consensus 113 ~ 113 (223)
-
T Consensus 80 i 80 (488)
T PRK03369 80 F 80 (488)
T ss_pred C
Confidence 4
No 264
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.046 Score=42.16 Aligned_cols=75 Identities=20% Similarity=0.327 Sum_probs=49.4
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe---eeecCCcccHHHHHHHhCC--CCccEEEc
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD---AFNYKEETDLKATLKRYFP--DGIDVYFD 109 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~vid 109 (223)
+++||+ |++|...++.....|++|+++++++++.+.+++..+... ..|..+.+.+.+.+.+... +++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578888 899999888888889999999999887776663333211 1333333123333333221 36899999
Q ss_pred CCC
Q 043295 110 NVG 112 (223)
Q Consensus 110 ~~g 112 (223)
+.|
T Consensus 83 ~ag 85 (276)
T PRK06482 83 NAG 85 (276)
T ss_pred CCC
Confidence 886
No 265
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.04 E-value=0.13 Score=39.62 Aligned_cols=102 Identities=17% Similarity=0.222 Sum_probs=65.8
Q ss_pred HHHHHh-hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCC-CCcc
Q 043295 29 GFYEIS-QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFP-DGID 105 (223)
Q Consensus 29 ~l~~~~-~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-~~~d 105 (223)
.+.... .++.+||=. .+.|..+..+++..+++|++++.++...+.+++.......+..... +.. ....+ +.||
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~---~~~~~~~~FD 119 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DIL---KKDFPENTFD 119 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Ccc---cCCCCCCCeE
Confidence 333444 788888877 7788888888887889999999999888888733322111111111 111 11112 3699
Q ss_pred EEEc--CC---C--h--HHHHHHHHhhccCcEEEEEcc
Q 043295 106 VYFD--NV---G--G--EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 106 ~vid--~~---g--~--~~~~~~~~~l~~~G~~v~~g~ 134 (223)
+|+. +. + . ..+..+.+.|+|||.++....
T Consensus 120 ~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 120 MIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9875 21 2 1 257788899999999998654
No 266
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.04 E-value=0.047 Score=41.67 Aligned_cols=78 Identities=23% Similarity=0.334 Sum_probs=50.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
-+++++||. |++|...++.....|++|+.++++.++.+.+.+.+ +.. ...|..+.+.+.+.+.+... ++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 467899999 89999999888888999999999887766554222 221 11233333123222222211 26
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 90 id~vi~~ag 98 (259)
T PRK08213 90 VDILVNNAG 98 (259)
T ss_pred CCEEEECCC
Confidence 899999876
No 267
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.04 E-value=0.043 Score=41.90 Aligned_cols=74 Identities=28% Similarity=0.312 Sum_probs=47.6
Q ss_pred EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCee--eecCCcccHHHHHHHhCC--CCccEEE
Q 043295 39 KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDDA--FNYKEETDLKATLKRYFP--DGIDVYF 108 (223)
Q Consensus 39 ~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~--~~~~~~~~~~~~i~~~~~--~~~d~vi 108 (223)
+++|+ +++|.+.++.....|++|+.+++++++.+.+.+++ +.... .|..+.++..+.+.+... +++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 57888 88999999888888999999999887765554333 21112 233333123333333222 3699999
Q ss_pred cCCC
Q 043295 109 DNVG 112 (223)
Q Consensus 109 d~~g 112 (223)
++.|
T Consensus 82 ~naG 85 (259)
T PRK08340 82 WNAG 85 (259)
T ss_pred ECCC
Confidence 9877
No 268
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.02 E-value=0.057 Score=41.81 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=62.6
Q ss_pred CCCEEEEE-C----chHHHHHHHHHHcCCeEEEEecCHH---HHHHHHHhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS-G----AYGHLVGQYAKLGGCYVVGSAGTNE---KVAILKEKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~-g----~vG~~a~qla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
.+++++|+ + ++|.+.++.....|++|+.++++.+ +.+.+.++++.... .|-.+.++....+.+... +.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46788998 3 6999999888889999999888742 33434324553322 344443233333333322 36
Q ss_pred ccEEEcCCCh---------------HHH---------------HHHHHhhccCcEEEEEccccc
Q 043295 104 IDVYFDNVGG---------------EML---------------EAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 104 ~d~vid~~g~---------------~~~---------------~~~~~~l~~~G~~v~~g~~~~ 137 (223)
+|+++++.|. +.+ +..+..+..+|+++.++...+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 9999998872 011 234456667799988876543
No 269
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.052 Score=41.12 Aligned_cols=77 Identities=18% Similarity=0.188 Sum_probs=48.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh--CCC-ee--eecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL--GFD-DA--FNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~~--~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++++++|. |++|...++.....|++|+.++++.++.+...+.+ +.. .. .|-.+.....+.+.+... +++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999 79999888877778999999999887655444233 221 11 233332123232322221 3699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 84 ~vi~~ag 90 (252)
T PRK06138 84 VLVNNAG 90 (252)
T ss_pred EEEECCC
Confidence 9999887
No 270
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.056 Score=41.72 Aligned_cols=76 Identities=21% Similarity=0.272 Sum_probs=49.4
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-ee--eecCCcccHHHHHHHhCC--CCccEEE
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DA--FNYKEETDLKATLKRYFP--DGIDVYF 108 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~i~~~~~--~~~d~vi 108 (223)
+++++|+ |++|..+++.+...|++|+.++++.++.+.+.+.++.. .. .|..+..++.+.+.+... +++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678998 89999988888888999999999988776665333321 11 233332123222332211 3689999
Q ss_pred cCCC
Q 043295 109 DNVG 112 (223)
Q Consensus 109 d~~g 112 (223)
.+.|
T Consensus 83 ~~ag 86 (275)
T PRK08263 83 NNAG 86 (275)
T ss_pred ECCC
Confidence 9987
No 271
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.01 E-value=0.058 Score=41.66 Aligned_cols=77 Identities=14% Similarity=0.183 Sum_probs=47.7
Q ss_pred CCCEEEEE--C---chHHHHHHHHHHcCCeEEEEecCHHH---HHHHHHhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS--G---AYGHLVGQYAKLGGCYVVGSAGTNEK---VAILKEKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~--g---~vG~~a~qla~~~g~~v~~~~~~~~~---~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
+++++||+ + ++|.+.++.....|++|+.+++++.. .+.+.+++|.... .|-.+.++....+.+... +.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 46788999 3 79999999888899999998876532 2233223453222 244333223333333222 37
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999887
No 272
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.058 Score=41.16 Aligned_cols=77 Identities=13% Similarity=0.173 Sum_probs=46.4
Q ss_pred CCCEEEEE---CchHHHHHHHHHHc-CCeEEEEecCHHH-HHHHHHhh---CCC--ee--eecCCcccHHHHHHHhCC-C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLG-GCYVVGSAGTNEK-VAILKEKL---GFD--DA--FNYKEETDLKATLKRYFP-D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~-g~~v~~~~~~~~~-~~~~~~~~---g~~--~~--~~~~~~~~~~~~i~~~~~-~ 102 (223)
.+++++|+ |++|...++-+... |++|+.+++++++ .+.+.+++ +.. .+ .|..+.++..+.+.+... +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 46789999 89999988776666 5899999988765 44332122 321 12 343333133333333322 4
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++.+.|
T Consensus 87 ~id~li~~ag 96 (253)
T PRK07904 87 DVDVAIVAFG 96 (253)
T ss_pred CCCEEEEeee
Confidence 7998887775
No 273
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.99 E-value=0.065 Score=40.65 Aligned_cols=74 Identities=22% Similarity=0.363 Sum_probs=48.5
Q ss_pred EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee---eecCCcccHHHHHHHhCC--CCccEEEcC
Q 043295 39 KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA---FNYKEETDLKATLKRYFP--DGIDVYFDN 110 (223)
Q Consensus 39 ~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~i~~~~~--~~~d~vid~ 110 (223)
+++|. |++|...++.+...|++|+.+++++++.+.+.+.++.... .|-.+.+++.+.+..... +++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 57888 8899999988888899999999998887766534443211 233332123333332222 269999988
Q ss_pred CC
Q 043295 111 VG 112 (223)
Q Consensus 111 ~g 112 (223)
.|
T Consensus 82 ag 83 (248)
T PRK10538 82 AG 83 (248)
T ss_pred CC
Confidence 76
No 274
>PRK06128 oxidoreductase; Provisional
Probab=95.99 E-value=0.12 Score=40.42 Aligned_cols=77 Identities=17% Similarity=0.249 Sum_probs=45.9
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH--HHH----HHHHhhCCCee---eecCCcccHHHHHHHhCC-
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE--KVA----ILKEKLGFDDA---FNYKEETDLKATLKRYFP- 101 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~--~~~----~~~~~~g~~~~---~~~~~~~~~~~~i~~~~~- 101 (223)
-.++++||. |++|.++++.....|++|+.+.++.+ +.+ .++ ..|.... .|-.+.+...+.+.+...
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 346789999 89999999888889999988775432 222 222 3343211 233332122222322221
Q ss_pred -CCccEEEcCCC
Q 043295 102 -DGIDVYFDNVG 112 (223)
Q Consensus 102 -~~~d~vid~~g 112 (223)
+++|+++.+.|
T Consensus 132 ~g~iD~lV~nAg 143 (300)
T PRK06128 132 LGGLDILVNIAG 143 (300)
T ss_pred hCCCCEEEECCc
Confidence 36999998886
No 275
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.045 Score=41.10 Aligned_cols=77 Identities=12% Similarity=0.146 Sum_probs=49.7
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCe-e--eecCCcccHH---HHHHHhCCCC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDD-A--FNYKEETDLK---ATLKRYFPDG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~---~~i~~~~~~~ 103 (223)
++++++|. +++|.+.+......|++|+.+++++++++.+.++ .+... . .|-.+.++.. +.+.+..+++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46788999 7899998888888999999999988876654322 24321 1 2333321222 2333333326
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999886
No 276
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.96 E-value=0.41 Score=34.98 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=61.1
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
.++++||=. +|.|..+..+++.. +.+|++++.+++..+.+++ +++...+-... . +..+.+.......-++.++
T Consensus 39 ~~~~~VLDiG~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-~-d~~~~~~~~~~~~d~v~~~ 116 (196)
T PRK07402 39 EPDSVLWDIGAGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-G-SAPECLAQLAPAPDRVCIE 116 (196)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-C-chHHHHhhCCCCCCEEEEE
Confidence 677887777 88899888888765 5699999999988777663 34543321111 1 2222222222222234454
Q ss_pred CCCh--HHHHHHHHhhccCcEEEEEc
Q 043295 110 NVGG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 ~~g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
.... ..+..+.+.|+++|+++...
T Consensus 117 ~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 117 GGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred CCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 3322 46788889999999998775
No 277
>PRK08589 short chain dehydrogenase; Validated
Probab=95.96 E-value=0.049 Score=42.03 Aligned_cols=76 Identities=20% Similarity=0.279 Sum_probs=47.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
+++++||. +++|.+.++.....|++|+.++++ ++.+.+.+++ +.. ...|..+.++....+.+... +++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 46789999 799999998888889999999988 4433322133 321 12344433123333333221 368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++++.|
T Consensus 84 d~li~~Ag 91 (272)
T PRK08589 84 DVLFNNAG 91 (272)
T ss_pred CEEEECCC
Confidence 99998876
No 278
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.95 E-value=0.06 Score=40.45 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=47.7
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHH-HHHHHhhCCCe-eeecCCcccHHHHHHHhCC--CCccEEEc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKV-AILKEKLGFDD-AFNYKEETDLKATLKRYFP--DGIDVYFD 109 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid 109 (223)
++++||. +++|...++.....|++|+.+++++.+. +.++ ..+... ..|..+.++....+.+... +++|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 4678999 7899999988888999999999876543 3333 445321 1233332133333333322 25899999
Q ss_pred CCC
Q 043295 110 NVG 112 (223)
Q Consensus 110 ~~g 112 (223)
+.|
T Consensus 81 ~ag 83 (236)
T PRK06483 81 NAS 83 (236)
T ss_pred CCc
Confidence 886
No 279
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.047 Score=41.73 Aligned_cols=77 Identities=19% Similarity=0.318 Sum_probs=48.3
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CCcc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
+.++||. |++|..+++.+...|++|+.+++++.+.+.+.+.+ +... ..|..+.+.+...+.+... +++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3578888 89999999888888999999999877655443222 3211 1233332123333333221 2689
Q ss_pred EEEcCCCh
Q 043295 106 VYFDNVGG 113 (223)
Q Consensus 106 ~vid~~g~ 113 (223)
+++.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99998863
No 280
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.073 Score=40.74 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=49.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh--CCC-ee--eecCCcccHHHHHHHhC-CCCccE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL--GFD-DA--FNYKEETDLKATLKRYF-PDGIDV 106 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~~--~~~~~~~~~~~~i~~~~-~~~~d~ 106 (223)
++.+++|+ |++|...++.+...|++|+++++++++.+.+.+++ +.. .. .|-.+.++..+...... .+++|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 46789999 88999988888888999999999988776665343 111 11 23333212222111111 236899
Q ss_pred EEcCCCh
Q 043295 107 YFDNVGG 113 (223)
Q Consensus 107 vid~~g~ 113 (223)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9998773
No 281
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=95.94 E-value=0.13 Score=38.61 Aligned_cols=100 Identities=8% Similarity=0.010 Sum_probs=63.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeec-------CCc--ccHHHHHHHhC----
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNY-------KEE--TDLKATLKRYF---- 100 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~--~~~~~~i~~~~---- 100 (223)
.++.+|||- .|-|.-+.-+|. .|.+|++++-|+.-.+...++.+....+.. ... +-+...+.+..
T Consensus 42 ~~~~rvLvPgCGkg~D~~~LA~-~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~~~~~ 120 (226)
T PRK13256 42 NDSSVCLIPMCGCSIDMLFFLS-KGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLPKIAN 120 (226)
T ss_pred CCCCeEEEeCCCChHHHHHHHh-CCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCCcccc
Confidence 567899999 888988888876 599999999999888776534433211000 000 00000111111
Q ss_pred -CCCccEEEcCCC-----h----HHHHHHHHhhccCcEEEEEccc
Q 043295 101 -PDGIDVYFDNVG-----G----EMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 101 -~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+|.|+|..- . .+......+|+++|+++.+...
T Consensus 121 ~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~~ 165 (226)
T PRK13256 121 NLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVME 165 (226)
T ss_pred ccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEEe
Confidence 126999998552 1 2567788899999999888753
No 282
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.05 Score=41.31 Aligned_cols=77 Identities=16% Similarity=0.259 Sum_probs=49.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-ee--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-DA--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|. |++|...++.....|++|+.++++.++.+.+.+++ +.. .. .|..+..+..+.+.+... +.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999 89999999988889999999999877665544232 221 11 233332122222222221 258
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 87 d~li~~ag 94 (252)
T PRK07035 87 DILVNNAA 94 (252)
T ss_pred CEEEECCC
Confidence 99998886
No 283
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.93 E-value=0.12 Score=39.03 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=66.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC--eEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC--YVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
.||++|+=- .|.|.+++-+|+..|- +|+.....++..+.+++. +|....+..... +..+.+ .+..+|.++
T Consensus 93 ~pg~rVlEAGtGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~---~~~~vDav~ 168 (256)
T COG2519 93 SPGSRVLEAGTGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGI---DEEDVDAVF 168 (256)
T ss_pred CCCCEEEEcccCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-cccccc---cccccCEEE
Confidence 899998888 7889999999998875 999999888877766643 344332222221 222211 112688764
Q ss_pred -cCCCh-HHHHHHHHhhccCcEEEEEc
Q 043295 109 -DNVGG-EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 109 -d~~g~-~~~~~~~~~l~~~G~~v~~g 133 (223)
|..-. ..++.+.+.|+++|.++.+.
T Consensus 169 LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 169 LDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 65554 68999999999999999885
No 284
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.05 Score=42.74 Aligned_cols=78 Identities=18% Similarity=0.194 Sum_probs=49.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCCe----eeecCCcccHHHHHHHhCC--
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFDD----AFNYKEETDLKATLKRYFP-- 101 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~i~~~~~-- 101 (223)
..+++++|. |++|..+++.....|++|+.++++.++.+.+.+++ +... ..|-.+.++....+.+...
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 467899999 89999999888888999999999877654432222 1111 1233333123222333322
Q ss_pred CCccEEEcCCC
Q 043295 102 DGIDVYFDNVG 112 (223)
Q Consensus 102 ~~~d~vid~~g 112 (223)
+++|++|.+.|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 26999999886
No 285
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.049 Score=41.56 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=48.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCe-EEEEecCHHHHHHHHH---hhCCCe---eeecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCY-VVGSAGTNEKVAILKE---KLGFDD---AFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~-v~~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++++|. |++|..+++.+...|++ |+.++++.++.....+ ..+... ..|..+.+.+.+.+..... ++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46788998 89999999888889998 9999988765542221 233321 1344433122222222211 36
Q ss_pred ccEEEcCCCh
Q 043295 104 IDVYFDNVGG 113 (223)
Q Consensus 104 ~d~vid~~g~ 113 (223)
+|+++.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999873
No 286
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.055 Score=41.83 Aligned_cols=76 Identities=17% Similarity=0.314 Sum_probs=48.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCC---e--eeecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFD---D--AFNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~--~~~~~~~~~~~~~i~~~~~--~ 102 (223)
.++++||+ |++|...+......|++|+++++++++.+.+.+. .+.. . ..|..+.+++.. +.+... +
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 35678998 8999999988888899999999888766554322 2211 1 124444323333 433322 3
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++.+.|
T Consensus 81 ~id~vv~~ag 90 (280)
T PRK06914 81 RIDLLVNNAG 90 (280)
T ss_pred CeeEEEECCc
Confidence 6899999876
No 287
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.069 Score=41.16 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=49.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC-----CC-ee--eecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG-----FD-DA--FNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g-----~~-~~--~~~~~~~~~~~~i~~~~~--~ 102 (223)
+++++||. |++|..+++.+...|++|+.+++++++.+...+++. .. .+ .|-.+.+++...+.+... +
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999 899999999888899999999988776544432321 11 11 233332123333333322 2
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|++|.+.|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899998886
No 288
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.89 E-value=0.074 Score=40.41 Aligned_cols=77 Identities=25% Similarity=0.326 Sum_probs=48.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|+ |++|...++.....|++|+.+++++++.+....++ +.. ...|..+.+++.+.+..... +++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999 89999888887788999999999887765443232 321 11233333123232332221 268
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|.+.|
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99998886
No 289
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.88 E-value=0.069 Score=40.15 Aligned_cols=78 Identities=19% Similarity=0.318 Sum_probs=49.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCCee---eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFDDA---FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~---~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++.+++|+ |++|...++.....|++|+.+++++.+.+.+.+ ..+.... .|..+...+.+.+.+... +++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35689999 889999988888889999999998877554432 2233221 244333123333332211 258
Q ss_pred cEEEcCCCh
Q 043295 105 DVYFDNVGG 113 (223)
Q Consensus 105 d~vid~~g~ 113 (223)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998853
No 290
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.053 Score=41.21 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=48.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCC-ee--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFD-DA--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|. |++|...++.....|++|+.+++++++.+.+.+. .+.. .. .|..+.+++.+.+.+... +++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999 8999999988888899999999988765443322 2321 11 233332122222222211 368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 86 d~li~~ag 93 (253)
T PRK06172 86 DYAFNNAG 93 (253)
T ss_pred CEEEECCC
Confidence 99998876
No 291
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.87 E-value=0.079 Score=40.41 Aligned_cols=76 Identities=24% Similarity=0.257 Sum_probs=47.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|+ |++|.+.++.....|++|+.+++++...+... ++ +.+. ..|..+.++....+.+... +++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999 89999999888889999999998754323222 32 3221 2344433123333333222 369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999886
No 292
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.059 Score=40.76 Aligned_cols=76 Identities=17% Similarity=0.305 Sum_probs=48.3
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh-----CCC-e--eeecCCcccHHHHHHHhCC--CC
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL-----GFD-D--AFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
+++++|+ |++|...++.....|++|+.+++++++.+.+...+ +.. . ..|..+.+++.+.+.+... ++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678898 89998888777778999999999887766554222 211 1 1344443233333333322 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999886
No 293
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.87 E-value=0.054 Score=40.77 Aligned_cols=77 Identities=19% Similarity=0.314 Sum_probs=47.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+.+++|. |++|..++..+...|++|+.+++++++.+...+++ +... ..|..+..++.+.+++... +++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35688888 78999888877788999999999877655443222 2211 1233332233333333322 268
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|.+.|
T Consensus 86 d~vi~~ag 93 (239)
T PRK07666 86 DILINNAG 93 (239)
T ss_pred cEEEEcCc
Confidence 99998876
No 294
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.87 E-value=0.34 Score=37.65 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=65.8
Q ss_pred CEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCee-e-ecCCc---ccHHHHHHHhCCCCccEEE-c
Q 043295 38 EKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDA-F-NYKEE---TDLKATLKRYFPDGIDVYF-D 109 (223)
Q Consensus 38 ~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~---~~~~~~i~~~~~~~~d~vi-d 109 (223)
++|||. ||-|..+-.++|.... +++++.-.++=.+.+++.++.... . |.+-. ++-.+.+++... ++|+|| |
T Consensus 78 k~VLiiGgGdG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGDGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIVD 156 (282)
T ss_pred CeEEEECCCccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEEc
Confidence 699999 9999999999998866 899999888888888855543221 1 22211 133444554433 799885 4
Q ss_pred CCCh----------HHHHHHHHhhccCcEEEEE
Q 043295 110 NVGG----------EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 110 ~~g~----------~~~~~~~~~l~~~G~~v~~ 132 (223)
+... +-++.+.++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 4432 2577889999999999876
No 295
>PRK01581 speE spermidine synthase; Validated
Probab=95.87 E-value=0.28 Score=39.43 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=62.2
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhC-C----------CeeeecCCcccHHHHHHHhCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLG-F----------DDAFNYKEETDLKATLKRYFP 101 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g-~----------~~~~~~~~~~~~~~~i~~~~~ 101 (223)
...++|||. ||.|..+..+++..+ .+|+++..+++-.+.++ ++. . ..+ ...-. +..+.++. .+
T Consensus 149 ~~PkrVLIIGgGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV-~vvi~-Da~~fL~~-~~ 224 (374)
T PRK01581 149 IDPKRVLILGGGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRV-NVHVC-DAKEFLSS-PS 224 (374)
T ss_pred CCCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCce-EEEEC-cHHHHHHh-cC
Confidence 556799999 899998888888655 48999999988888888 421 0 111 11111 33344433 33
Q ss_pred CCccEEE-cCC---C--------hHHHHHHHHhhccCcEEEEEc
Q 043295 102 DGIDVYF-DNV---G--------GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 102 ~~~d~vi-d~~---g--------~~~~~~~~~~l~~~G~~v~~g 133 (223)
+.||+|| |.. + .+.+..+.+.|+++|.++.-.
T Consensus 225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 4799886 432 1 124667888999999987754
No 296
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.081 Score=40.29 Aligned_cols=76 Identities=21% Similarity=0.266 Sum_probs=48.5
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC--e--eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD--D--AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
+++++|+ |++|...+......|++|+.++++..+.+.+.+.+... . ..|-.+.+.+...+.+... +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678998 78999888877788999999999887766554233211 1 1333333122233333221 268999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 82 i~~ag 86 (257)
T PRK07074 82 VANAG 86 (257)
T ss_pred EECCC
Confidence 99887
No 297
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.84 E-value=0.06 Score=41.02 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=46.4
Q ss_pred CCCEEEEE--C---chHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee----eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS--G---AYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA----FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~--g---~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+++++|. + ++|.+.++.....|++|+.++++++..+.++ ++....+ .|-.+.++..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999 3 6999999888889999999988754333344 3322111 233332122222222221 369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++++.|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99998876
No 298
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.03 Score=43.01 Aligned_cols=74 Identities=18% Similarity=0.341 Sum_probs=48.0
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe-eeecCCcccHHHHHHHhCC--CCccEEEcC
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD-AFNYKEETDLKATLKRYFP--DGIDVYFDN 110 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid~ 110 (223)
+++++|. |++|...++.....|++|++++++.++.+... +... ..|..+.+++.+.+..... +.+|++|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 4678888 89999988888888999999998876543221 2222 2344443233333433322 368999999
Q ss_pred CCh
Q 043295 111 VGG 113 (223)
Q Consensus 111 ~g~ 113 (223)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 873
No 299
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.81 E-value=0.24 Score=40.99 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=62.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHh-CCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRY-FPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~-~~~~~d~vi 108 (223)
++|++||=. .+.|..+.++++..+ .+|++++.++++++.+++ .+|....+...+. +.. ..... ..+.||.|+
T Consensus 237 ~~g~~VLDlcag~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~-d~~-~~~~~~~~~~fD~Vl 314 (426)
T TIGR00563 237 QNEETILDACAAPGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG-DGR-GPSQWAENEQFDRIL 314 (426)
T ss_pred CCCCeEEEeCCCccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc-ccc-cccccccccccCEEE
Confidence 788888877 778888888888775 699999999998876653 3465411100111 100 00001 112699886
Q ss_pred -c--CCCh--------------------------HHHHHHHHhhccCcEEEEEcc
Q 043295 109 -D--NVGG--------------------------EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 109 -d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~ 134 (223)
| |+|. ..+..++++|++||+++....
T Consensus 315 lDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc 369 (426)
T TIGR00563 315 LDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC 369 (426)
T ss_pred EcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3 4541 245567889999999997654
No 300
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.78 E-value=0.068 Score=38.15 Aligned_cols=100 Identities=19% Similarity=0.169 Sum_probs=63.5
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeec-CC---------------cccHHHHHH
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNY-KE---------------ETDLKATLK 97 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~-~~---------------~~~~~~~i~ 97 (223)
+..+|+|. |.+|..|+++++.+|++|+..+..+++.+... .++...+... .+ .......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 44678888 99999999999999999999999998888887 6766433221 00 001222222
Q ss_pred HhCCCCccEEEc-CCC-h---H--HHHHHHHhhccCcEEEEEccccc
Q 043295 98 RYFPDGIDVYFD-NVG-G---E--MLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 98 ~~~~~~~d~vid-~~g-~---~--~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
+... .+|++|. +.- + + ..+..+..|+++..++.++.-.+
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 2111 2788874 321 2 1 24567888999999999876544
No 301
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.78 E-value=0.12 Score=40.70 Aligned_cols=87 Identities=18% Similarity=0.227 Sum_probs=57.9
Q ss_pred CEEEEE--CchHHHHHHHHHHcCC--eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 38 EKVFVS--GAYGHLVGQYAKLGGC--YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 38 ~~vlI~--g~vG~~a~qla~~~g~--~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
.+|.|. |.+|...++.++..|. +|++.++++++.+.++ +.|...... . +..+.+ ...|+|+.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~---~-~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT---T-SAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec---C-CHHHHh-----cCCCEEEECCCH
Confidence 578888 9999999888888885 8999999998888887 677522111 1 222222 248899999886
Q ss_pred HH----HHHHHHhhccCcEEEEEcc
Q 043295 114 EM----LEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 114 ~~----~~~~~~~l~~~G~~v~~g~ 134 (223)
.. +......++++..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 43 2333345566666666654
No 302
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.77 E-value=0.078 Score=40.93 Aligned_cols=77 Identities=16% Similarity=0.268 Sum_probs=49.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++++|. |++|.+.++.....|++|+.+++++++.+.+.+++ +... ..|..+..+....+.+... +++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 56788999 89999999988889999999998877655443232 3211 1233332122222222221 369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999877
No 303
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.067 Score=40.30 Aligned_cols=77 Identities=14% Similarity=0.239 Sum_probs=48.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+++++|. |++|..++..+...|++|+++++++++.+.+.+.+ +... . .|-.+.+++...+..... +++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45678888 88999999888889999999999887765554222 2211 1 233332122222332221 269
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 85 d~lv~~ag 92 (241)
T PRK07454 85 DVLINNAG 92 (241)
T ss_pred CEEEECCC
Confidence 99999887
No 304
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.73 E-value=0.093 Score=40.20 Aligned_cols=77 Identities=14% Similarity=0.231 Sum_probs=46.0
Q ss_pred CCCEEEEE---C--chHHHHHHHHHHcCCeEEEEecCHH---HHHHHHHhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---G--AYGHLVGQYAKLGGCYVVGSAGTNE---KVAILKEKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g--~vG~~a~qla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
.++.++|+ + ++|.+.++.....|++|+..++++. ..+.+.++.|.... .|-.+.++..+.+.+... +.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46788888 2 6999998888888999998887642 22333223343222 344443233333333222 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999998776
No 305
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.72 E-value=0.07 Score=40.59 Aligned_cols=77 Identities=23% Similarity=0.386 Sum_probs=49.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.++++||+ |++|...++.....|++|+.+++++++.+.+.+++ +... . .|-.+.+.+.+.+..... +++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 46789999 89999999888888999999998877655443232 2211 1 233333122222222211 369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 88 d~vi~~ag 95 (254)
T PRK08085 88 DVLINNAG 95 (254)
T ss_pred CEEEECCC
Confidence 99999887
No 306
>PRK06720 hypothetical protein; Provisional
Probab=95.69 E-value=0.09 Score=37.58 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=46.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHhC--CCCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRYF--PDGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~~--~~~~ 104 (223)
+++.++|. +++|...+......|++|+.++++.+..+...+++ +... . .|..+.+++.+.+.+.. -+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56788888 67999888888788999999998876554332132 3321 1 22222212222222211 1368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++++.|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 88888877
No 307
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.67 E-value=0.074 Score=40.53 Aligned_cols=77 Identities=14% Similarity=0.234 Sum_probs=48.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCee---eecCCcccHHHHHHHhC--CCCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDA---FNYKEETDLKATLKRYF--PDGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~i~~~~--~~~~ 104 (223)
+++++||+ |++|..+++.....|++|+.+++++++.+.+.++ .+.... .|..+.+.+.+.+.+.. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999 8999999998888999999999988665444322 333221 23333312222222221 1258
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 86 d~vi~~ag 93 (262)
T PRK13394 86 DILVSNAG 93 (262)
T ss_pred CEEEECCc
Confidence 99998886
No 308
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.65 E-value=0.11 Score=40.42 Aligned_cols=93 Identities=15% Similarity=0.082 Sum_probs=60.0
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
..+++++|. |++|.+++..+...| .+|+.+.++.++.+.+.+.++....+.. .. +..+.+ ..+|+|++|+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivInaT 193 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINAT 193 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEECC
Confidence 456789999 999999999999999 5999999999887766645542110111 00 111111 2589999998
Q ss_pred ChHHH------HHHHHhhccCcEEEEEcc
Q 043295 112 GGEML------EAAVANMNLFGRVAACGV 134 (223)
Q Consensus 112 g~~~~------~~~~~~l~~~G~~v~~g~ 134 (223)
..... ......+.++..++.+-.
T Consensus 194 p~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 194 SAGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 74221 123356777777777654
No 309
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.62 E-value=0.077 Score=41.03 Aligned_cols=77 Identities=21% Similarity=0.326 Sum_probs=51.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhC---CC------eeeecCCc---ccHHHHHHHhC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLG---FD------DAFNYKEE---TDLKATLKRYF 100 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g---~~------~~~~~~~~---~~~~~~i~~~~ 100 (223)
.++.++|+ .++|.+.+......|++|+.+++++++.+....++. .. ...|-.+. ..+.+...+..
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 57788888 799999999999999999999999988765553322 11 12233322 12222233333
Q ss_pred CCCccEEEcCCC
Q 043295 101 PDGIDVYFDNVG 112 (223)
Q Consensus 101 ~~~~d~vid~~g 112 (223)
.|++|+.++..|
T Consensus 87 ~GkidiLvnnag 98 (270)
T KOG0725|consen 87 FGKIDILVNNAG 98 (270)
T ss_pred CCCCCEEEEcCC
Confidence 457999998776
No 310
>PLN03075 nicotianamine synthase; Provisional
Probab=95.59 E-value=0.27 Score=38.40 Aligned_cols=96 Identities=11% Similarity=-0.012 Sum_probs=63.0
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHc--CCeEEEEecCHHHHHHHHHhh----CCCeeeecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLG--GCYVVGSAGTNEKVAILKEKL----GFDDAFNYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~--g~~v~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
.++++|+-. |+.|..++.+++.. +.++++++.+++..+.+++.+ |...-+..... +..+... ..++||+
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~--~l~~FDl 198 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTE--SLKEYDV 198 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhccc--ccCCcCE
Confidence 577888888 77888888887654 458999999999888887433 22222222222 2222110 0137999
Q ss_pred EEcCC------Ch--HHHHHHHHhhccCcEEEEEc
Q 043295 107 YFDNV------GG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 107 vid~~------g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
||-.+ .. ..++...+.|++||.++.=.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 98664 22 36788899999999998754
No 311
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.59 E-value=0.12 Score=37.78 Aligned_cols=93 Identities=14% Similarity=0.086 Sum_probs=58.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
.++.+||-. .|.|..+..+++ .|.+|++++.++.-.+.+++ ..+.. +..... +... . . .++.+|+|+.+
T Consensus 29 ~~~~~vLDiGcG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~fD~I~~~ 101 (195)
T TIGR00477 29 VAPCKTLDLGCGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNEDYDFIFST 101 (195)
T ss_pred CCCCcEEEeCCCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCCCCEEEEe
Confidence 455678877 889999998887 48899999999887766652 22322 111111 1110 0 1 12369988754
Q ss_pred C-----Ch----HHHHHHHHhhccCcEEEEEcc
Q 043295 111 V-----GG----EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 111 ~-----g~----~~~~~~~~~l~~~G~~v~~g~ 134 (223)
. .. ..+..+.+.|++||.++.+..
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~ 134 (195)
T TIGR00477 102 VVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA 134 (195)
T ss_pred cccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 2 21 356778889999999665543
No 312
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.58 E-value=0.066 Score=41.67 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=54.1
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeee---cCCc-----ccHHHHHHHhC--C
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFN---YKEE-----TDLKATLKRYF--P 101 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~---~~~~-----~~~~~~i~~~~--~ 101 (223)
++...++|. .++|++.+..|+..|+.|..+.++.+|++.+++.++....+. +... +.-...+++.- .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 445788888 689999999999999999999999999988886766522111 1111 01122222221 2
Q ss_pred CCccEEEcCCCh
Q 043295 102 DGIDVYFDNVGG 113 (223)
Q Consensus 102 ~~~d~vid~~g~ 113 (223)
+.+|.+|.|.|.
T Consensus 111 ~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 111 GPIDNLFCCAGV 122 (331)
T ss_pred CCcceEEEecCc
Confidence 368999999985
No 313
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.57 E-value=0.093 Score=39.93 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=49.4
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCe-e--eecCCcccHHHHHHHhCC--CC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDD-A--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
-++++++|. |++|...++.....|++|+.+++++++.+.+.++ .+... . .|..+.+++...+.+... ++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 457899999 8999998888778899999999987765543322 23211 1 233333123333332221 26
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 89 id~vi~~ag 97 (256)
T PRK06124 89 LDILVNNVG 97 (256)
T ss_pred CCEEEECCC
Confidence 899998887
No 314
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.56 E-value=0.24 Score=35.09 Aligned_cols=85 Identities=20% Similarity=0.176 Sum_probs=53.8
Q ss_pred EEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh-HH
Q 043295 39 KVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG-EM 115 (223)
Q Consensus 39 ~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~ 115 (223)
+|-+. |.+|...++-....|++|++..+++++.+.+. +.|+... + +..+.+.+ .|+|+-|+.. +.
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~-~-----s~~e~~~~-----~dvvi~~v~~~~~ 70 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA-D-----SPAEAAEQ-----ADVVILCVPDDDA 70 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE-S-----SHHHHHHH-----BSEEEE-SSSHHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh-h-----hhhhHhhc-----ccceEeecccchh
Confidence 56666 88888888888888999999999999988888 6664222 1 23333333 6888887775 33
Q ss_pred HHHH------HHhhccCcEEEEEccc
Q 043295 116 LEAA------VANMNLFGRVAACGVI 135 (223)
Q Consensus 116 ~~~~------~~~l~~~G~~v~~g~~ 135 (223)
.... +..+.++..++.+++.
T Consensus 71 v~~v~~~~~i~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 71 VEAVLFGENILAGLRPGKIIIDMSTI 96 (163)
T ss_dssp HHHHHHCTTHGGGS-TTEEEEE-SS-
T ss_pred hhhhhhhhHHhhccccceEEEecCCc
Confidence 3333 3344566666666543
No 315
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=95.56 E-value=0.17 Score=33.40 Aligned_cols=96 Identities=22% Similarity=0.251 Sum_probs=60.7
Q ss_pred CCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 37 GEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 37 g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
|.+|+-. .|.|..+..+++....++++++.++.-.+.+++.+ +.+.-++.... ++.+.......+.+|+|+-...
T Consensus 1 g~~vlD~~~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~npP 79 (117)
T PF13659_consen 1 GDRVLDPGCGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTNPP 79 (117)
T ss_dssp TEEEEEETSTTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE--S
T ss_pred CCEEEEcCcchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEECCC
Confidence 4566666 78898888888776579999999999888777432 22111222222 4444443333448999975221
Q ss_pred -h--------------HHHHHHHHhhccCcEEEEEc
Q 043295 113 -G--------------EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 113 -~--------------~~~~~~~~~l~~~G~~v~~g 133 (223)
. ..+..+.++|+++|.++.+-
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~ 115 (117)
T PF13659_consen 80 YGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFIT 115 (117)
T ss_dssp TTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccccchhhHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 1 13667889999999998763
No 316
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.08 Score=40.32 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=48.7
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
+++++||+ |++|...++.....|++|+.+++++.+.+... ++ +.. ...|..+.+++...+.+... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 56789999 78999988888888999999998877654333 32 322 11333333123332333222 368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 85 d~vi~~ag 92 (258)
T PRK08628 85 DGLVNNAG 92 (258)
T ss_pred CEEEECCc
Confidence 99999988
No 317
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.56 E-value=0.22 Score=38.86 Aligned_cols=98 Identities=22% Similarity=0.171 Sum_probs=62.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
++|++|+=. .|.|..++-.++ +|+ +|++++-.+--.+..++ ..+.... ..... -.......++.+|+|+-
T Consensus 161 ~~g~~vlDvGcGSGILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~-~~~~~---~~~~~~~~~~~~DvIVA 235 (300)
T COG2264 161 KKGKTVLDVGCGSGILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELL-VQAKG---FLLLEVPENGPFDVIVA 235 (300)
T ss_pred cCCCEEEEecCChhHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchh-hhccc---ccchhhcccCcccEEEe
Confidence 889998888 788887776554 566 79999977765555542 2233210 00000 00011122237999998
Q ss_pred CCChH----HHHHHHHhhccCcEEEEEccccc
Q 043295 110 NVGGE----MLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 110 ~~g~~----~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
.+=.+ ...+...+++|+|++++.|....
T Consensus 236 NILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 236 NILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred hhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 77543 45567789999999999997653
No 318
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.55 E-value=0.11 Score=39.11 Aligned_cols=77 Identities=25% Similarity=0.369 Sum_probs=48.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe-e--eecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD-A--FNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~-~--~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
++.+++|. |++|..+++.....|+.|+...++.++.+.+...++... . .|-.+.+.+.+.+.+... +++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46789999 899999888888889999888888777665543444311 1 232332122222222211 369999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 85 i~~ag 89 (245)
T PRK12936 85 VNNAG 89 (245)
T ss_pred EECCC
Confidence 99887
No 319
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.1 Score=40.33 Aligned_cols=77 Identities=14% Similarity=0.211 Sum_probs=47.1
Q ss_pred CCCEEEEE-C----chHHHHHHHHHHcCCeEEEEecCH---HHHHHHHHhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS-G----AYGHLVGQYAKLGGCYVVGSAGTN---EKVAILKEKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~-g----~vG~~a~qla~~~g~~v~~~~~~~---~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
.++++||+ + ++|.+.++.....|++|+.+.+++ ++.+.+.++++.... .|-.+.++..+.+.+... +.
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 46788998 3 699999988888999999887663 334444334553222 333333122222332222 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 89 iD~lv~nAG 97 (272)
T PRK08159 89 LDFVVHAIG 97 (272)
T ss_pred CcEEEECCc
Confidence 999998876
No 320
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.52 E-value=0.39 Score=36.75 Aligned_cols=89 Identities=19% Similarity=0.181 Sum_probs=62.7
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
.++.+||=. +|.|..+..+++.. +.+|++++.++.-.+.++ +.+.+.+. . +.. .+ ...+.||+|+....
T Consensus 28 ~~~~~vLDlGcG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~~~----~-d~~-~~--~~~~~fD~v~~~~~ 98 (255)
T PRK14103 28 ERARRVVDLGCGPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDART----G-DVR-DW--KPKPDTDVVVSNAA 98 (255)
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcEEE----c-Chh-hC--CCCCCceEEEEehh
Confidence 677888888 88899999998876 679999999998888887 55443221 1 221 11 11237999976432
Q ss_pred -----h--HHHHHHHHhhccCcEEEEE
Q 043295 113 -----G--EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 113 -----~--~~~~~~~~~l~~~G~~v~~ 132 (223)
. ..+....+.|+|||.++..
T Consensus 99 l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 99 LQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 1 3577888999999999865
No 321
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.51 E-value=0.1 Score=39.76 Aligned_cols=76 Identities=17% Similarity=0.279 Sum_probs=47.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHH--HHHHHHhhCCCe---eeecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEK--VAILKEKLGFDD---AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~--~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++++++|+ +++|.+.++.....|++|+.++++... .+.++ +.+... ..|-.+.++..+.+.+... +++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57889999 899999999888899999988865432 12333 344321 1344443233333333221 3699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++++.|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999886
No 322
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.50 E-value=0.12 Score=39.57 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=47.0
Q ss_pred CCCEEEEE--C---chHHHHHHHHHHcCCeEEEEecCHHH---HHHHHHhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS--G---AYGHLVGQYAKLGGCYVVGSAGTNEK---VAILKEKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~--g---~vG~~a~qla~~~g~~v~~~~~~~~~---~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
.+++++|+ + ++|.+.++.....|++|+.++++++. .+.+.++++.... .|-.+.++....+.+... +.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57889999 3 69999998888899999998887543 2333324443222 233332122222222221 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 89 ld~lv~nAg 97 (258)
T PRK07533 89 LDFLLHSIA 97 (258)
T ss_pred CCEEEEcCc
Confidence 999998876
No 323
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.50 E-value=0.084 Score=40.84 Aligned_cols=76 Identities=17% Similarity=0.283 Sum_probs=49.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHH----HHHHHhhCC--CeeeecCCcccH---HHHHHHhCCC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKV----AILKEKLGF--DDAFNYKEETDL---KATLKRYFPD 102 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~----~~~~~~~g~--~~~~~~~~~~~~---~~~i~~~~~~ 102 (223)
-.|+.|||+ +|+|++.++=....|++++.++.+.+.. +.++ +.|- .++.|-.+.++. .+++++..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G- 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVG- 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcC-
Confidence 568999999 7899988887778899988888776533 3333 3341 234444443233 333443333
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
.+|++++..|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 6999998776
No 324
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=95.49 E-value=0.019 Score=36.13 Aligned_cols=82 Identities=23% Similarity=0.271 Sum_probs=52.1
Q ss_pred CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe--eeecCCcccHHHHHHHhCCCCccEEEcCCC-----h--H
Q 043295 44 GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD--AFNYKEETDLKATLKRYFPDGIDVYFDNVG-----G--E 114 (223)
Q Consensus 44 g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g-----~--~ 114 (223)
.+.|..+..+++..+.+|++++.+++..+.+++...... +...+.. ++ .+.++.+|+|+.... . .
T Consensus 5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~ 78 (95)
T PF08241_consen 5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA 78 (95)
T ss_dssp -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence 467888999999867799999999998898884333222 2111111 11 112236898875332 1 3
Q ss_pred HHHHHHHhhccCcEEEE
Q 043295 115 MLEAAVANMNLFGRVAA 131 (223)
Q Consensus 115 ~~~~~~~~l~~~G~~v~ 131 (223)
.+..+.+.|+++|+++.
T Consensus 79 ~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 79 ALREIYRVLKPGGRLVI 95 (95)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHcCcCeEEeC
Confidence 57889999999999873
No 325
>PRK08317 hypothetical protein; Provisional
Probab=95.48 E-value=0.26 Score=36.94 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=62.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHhh--CCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEKL--GFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
.++++||-. .+.|..+..+++..+ .++++++.++...+.++ +. .....+..... +... . ....+.+|+|+.
T Consensus 18 ~~~~~vLdiG~G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~-~~~~~~~~~~~~~~~-d~~~-~-~~~~~~~D~v~~ 93 (241)
T PRK08317 18 QPGDRVLDVGCGPGNDARELARRVGPEGRVVGIDRSEAMLALAK-ERAAGLGPNVEFVRG-DADG-L-PFPDGSFDAVRS 93 (241)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HHhhCCCCceEEEec-cccc-C-CCCCCCceEEEE
Confidence 778899888 777999999998873 59999999998888887 43 11111111111 1100 0 112236888874
Q ss_pred CC-----Ch--HHHHHHHHhhccCcEEEEEc
Q 043295 110 NV-----GG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 ~~-----g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
.. .. ..+....++|+++|.++...
T Consensus 94 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 94 DRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred echhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 32 22 36788899999999998765
No 326
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=95.48 E-value=0.32 Score=40.38 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=63.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc--CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG--GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
++|++||=. .+.|..+.+++... +.+|++++.++++++.+++ .+|.+.+- .... +.. .+.....+.||.|+
T Consensus 236 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~-~~~~-Da~-~l~~~~~~~fD~Vl 312 (431)
T PRK14903 236 EPGLRVLDTCAAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIE-IKIA-DAE-RLTEYVQDTFDRIL 312 (431)
T ss_pred CCCCEEEEeCCCccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEE-EEEC-chh-hhhhhhhccCCEEE
Confidence 788887777 78898889999887 4599999999999887763 34554321 1111 111 12212233699886
Q ss_pred -c--CCChH--------------------------HHHHHHHhhccCcEEEEEccc
Q 043295 109 -D--NVGGE--------------------------MLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 109 -d--~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 135 (223)
| |+|.. .+..++..|++||.++.....
T Consensus 313 ~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 368 (431)
T PRK14903 313 VDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTCT 368 (431)
T ss_pred ECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3 44321 155778899999998876653
No 327
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.094 Score=39.92 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=46.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH-HHHHHHH---hhCCCe-e--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE-KVAILKE---KLGFDD-A--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~~-~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++++|+ +++|.++++.....|++|+.++++.+ ..+.+.+ ..+... . .|-.+.++..+.+.+... +.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56788999 89999999988889999999987643 2222211 223211 1 233333133333333221 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 87 id~li~~ag 95 (254)
T PRK06114 87 LTLAVNAAG 95 (254)
T ss_pred CCEEEECCC
Confidence 899999887
No 328
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.43 E-value=0.066 Score=41.39 Aligned_cols=104 Identities=20% Similarity=0.273 Sum_probs=65.3
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCCe-e----eecCCcccHHHHHHHhCC--
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFDD-A----FNYKEETDLKATLKRYFP-- 101 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~-~----~~~~~~~~~~~~i~~~~~-- 101 (223)
-.++.|+|+ +|+|.+.+.-....|++++.+++..++++.+.+ +.+... + .|-.+.++..+.+.+...
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 568899999 899988887777889998888888887776622 233322 2 233333233333322221
Q ss_pred CCccEEEcCCChH-----------HH---------------HHHHHhhcc-C-cEEEEEcccccc
Q 043295 102 DGIDVYFDNVGGE-----------ML---------------EAAVANMNL-F-GRVAACGVISEC 138 (223)
Q Consensus 102 ~~~d~vid~~g~~-----------~~---------------~~~~~~l~~-~-G~~v~~g~~~~~ 138 (223)
|++|+.++..|-. .+ ..++..|++ + |++|.++...+.
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 3799999877621 11 134455543 3 999999887764
No 329
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.37 E-value=0.11 Score=39.22 Aligned_cols=77 Identities=19% Similarity=0.257 Sum_probs=46.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCe-e--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDD-A--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+++++|+ |++|...+......|++|++++++.++.....+. .+... + .|..+.+.+.+.+.+... +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 35789999 8999988888888899999999986654433212 22211 1 233332122222222211 258
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 85 d~vi~~ag 92 (251)
T PRK12826 85 DILVANAG 92 (251)
T ss_pred CEEEECCC
Confidence 99988875
No 330
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.37 E-value=0.096 Score=39.89 Aligned_cols=77 Identities=18% Similarity=0.258 Sum_probs=49.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCe---eeecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDD---AFNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+++++|. +++|...+......|++|+.++++.++.+.+.++ .+... ..|..+.++..+.+..... +++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999 8999999988888899999999887766544322 23211 1344433223333332221 368
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 90 d~li~~ag 97 (255)
T PRK06113 90 DILVNNAG 97 (255)
T ss_pred CEEEECCC
Confidence 99999887
No 331
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.36 E-value=0.15 Score=40.28 Aligned_cols=76 Identities=13% Similarity=0.189 Sum_probs=48.8
Q ss_pred CCEEEEE---CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCC--C--ee--eecCCcccHHHHHHHhC--CCCc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGF--D--DA--FNYKEETDLKATLKRYF--PDGI 104 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~--~--~~--~~~~~~~~~~~~i~~~~--~~~~ 104 (223)
+++++|. +++|.+.++.....| ++|+.++++.++.+.+.++++. . .. .|-.+.++....+.+.. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5688888 789999888777889 8999999988876655435432 1 11 34333312332333322 2369
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|.+.|
T Consensus 83 D~lI~nAG 90 (314)
T TIGR01289 83 DALVCNAA 90 (314)
T ss_pred CEEEECCC
Confidence 99998876
No 332
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.13 Score=39.30 Aligned_cols=77 Identities=17% Similarity=0.244 Sum_probs=46.7
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH--hhCCCe---eeecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE--KLGFDD---AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~--~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++++++|. |++|...++.+...|++|+.++++.+..+.+.+ ..+... ..|..+..+....+.+... +.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46788999 899999998888889999999988754333331 223221 1233332122222222211 3689
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
++|.+.|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999887
No 333
>PRK07985 oxidoreductase; Provisional
Probab=95.35 E-value=0.28 Score=38.40 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=45.7
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH--HHHHHHHH---hhCCCe---eeecCCcccHHHHHHHhCC--
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN--EKVAILKE---KLGFDD---AFNYKEETDLKATLKRYFP-- 101 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~--~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~-- 101 (223)
-++++++|. |++|.+.++.....|++|+.+.++. ++.+.+.+ +.|... ..|-.+.+.....+.+...
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 345789999 8999999988888899999876542 23333321 223221 1233333123333333222
Q ss_pred CCccEEEcCCC
Q 043295 102 DGIDVYFDNVG 112 (223)
Q Consensus 102 ~~~d~vid~~g 112 (223)
+++|+++.+.|
T Consensus 127 g~id~lv~~Ag 137 (294)
T PRK07985 127 GGLDIMALVAG 137 (294)
T ss_pred CCCCEEEECCC
Confidence 36899988776
No 334
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.34 E-value=0.23 Score=37.25 Aligned_cols=93 Identities=17% Similarity=0.150 Sum_probs=61.8
Q ss_pred CCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCe--eeecCCcccHHHHHHHhCCCCccEEEc---
Q 043295 36 KGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDD--AFNYKEETDLKATLKRYFPDGIDVYFD--- 109 (223)
Q Consensus 36 ~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid--- 109 (223)
+|.+||=. .|.|... +-..+.|++|++++-+++-.+.++ ...... -+||... ..+.+.+.. +.||+|+.
T Consensus 59 ~g~~vLDvGCGgG~Ls-e~mAr~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~~-~~FDvV~cmEV 133 (243)
T COG2227 59 PGLRVLDVGCGGGILS-EPLARLGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASAG-GQFDVVTCMEV 133 (243)
T ss_pred CCCeEEEecCCccHhh-HHHHHCCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhcC-CCccEEEEhhH
Confidence 67777777 4556544 444556899999999999888887 433322 2456653 344443321 47999964
Q ss_pred --CCCh--HHHHHHHHhhccCcEEEEEc
Q 043295 110 --NVGG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 --~~g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
-+.. ..+..+..+++|+|.++...
T Consensus 134 lEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 134 LEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred HHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 4443 35778899999999988764
No 335
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.28 E-value=0.18 Score=38.35 Aligned_cols=98 Identities=17% Similarity=0.229 Sum_probs=63.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC--eEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHH-HHHHHhCCCCccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC--YVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLK-ATLKRYFPDGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~-~~i~~~~~~~~d~v 107 (223)
.||++|+=- .|.|.+...+++..|- +|+....++++.+.+++. +|....+.-... +.. +...+-.++.+|.|
T Consensus 39 ~pG~~VlEaGtGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~~~~~Dav 117 (247)
T PF08704_consen 39 RPGSRVLEAGTGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEELESDFDAV 117 (247)
T ss_dssp -TT-EEEEE--TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-TTSEEEE
T ss_pred CCCCEEEEecCCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccccCcccEE
Confidence 999999888 7889999999998874 999999999888777643 455322111111 111 11111112358876
Q ss_pred -EcCCCh-HHHHHHHHhh-ccCcEEEEEc
Q 043295 108 -FDNVGG-EMLEAAVANM-NLFGRVAACG 133 (223)
Q Consensus 108 -id~~g~-~~~~~~~~~l-~~~G~~v~~g 133 (223)
+|-... ..+..+...| ++||+++.+.
T Consensus 118 fLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 118 FLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp EEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 465553 6789999999 8999999885
No 336
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.096 Score=39.80 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=46.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC--C-eeeecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF--D-DAFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
.+++++|. |++|...++.....|++|+.+++++++ . ..+. . ...|..+.+++.+.+..... +.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46889999 899999998888899999999987654 1 2222 1 12343333123333333221 368999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
|.+.|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99886
No 337
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.12 Score=39.62 Aligned_cols=77 Identities=10% Similarity=0.202 Sum_probs=45.2
Q ss_pred CCCEEEEE-C----chHHHHHHHHHHcCCeEEEEecCHHHHHHHH---HhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS-G----AYGHLVGQYAKLGGCYVVGSAGTNEKVAILK---EKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~-g----~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~---~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++++|+ | ++|.+.++.....|++|+.+.++++..+.++ +++|.... .|-.+.++....+.+... ++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 46788888 3 6999999888889999998876543223332 12332222 233333223323322222 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 85 iD~lVnnAG 93 (261)
T PRK08690 85 LDGLVHSIG 93 (261)
T ss_pred CcEEEECCc
Confidence 999999876
No 338
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.24 E-value=0.17 Score=38.75 Aligned_cols=78 Identities=18% Similarity=0.236 Sum_probs=48.5
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
-.+++++|. +++|...+......|++|+.+.+++++.+.+.+.+ |... ..|-.+..+....+.+... ++
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 356789999 89998888777788999999998887665443232 3321 1233332122222222211 26
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 88 id~li~~ag 96 (265)
T PRK07097 88 IDILVNNAG 96 (265)
T ss_pred CCEEEECCC
Confidence 899998887
No 339
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.39 Score=36.10 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=44.7
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH-HHHHHHH---hhCCC-ee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE-KVAILKE---KLGFD-DA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~-~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++.+++|+ |++|...++.....|++|+.+.++.. ..+.+.+ ..+.. .. .|-.+.+++.+.+.+... ++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56789999 89999999988889999888775432 2222221 22321 11 233332122222222211 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|++|.+.|
T Consensus 84 id~vi~~ag 92 (245)
T PRK12937 84 IDVLVNNAG 92 (245)
T ss_pred CCEEEECCC
Confidence 899998887
No 340
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.22 E-value=0.42 Score=36.99 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=60.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCC-Ce-----eeecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGF-DD-----AFNYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~-~~-----~~~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
+.+++||+. ++.|..+..+++..+. +++++..+++-.+.+++.+.. .. -++.... +..+.+++. .+.+|+
T Consensus 71 ~~p~~VL~iG~G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~~-~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLADT-ENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHhC-CCCccE
Confidence 455699999 7788888888876644 899999888777777632211 00 0111111 333334332 347998
Q ss_pred EEc-CC---C-------hHHHHHHHHhhccCcEEEEEc
Q 043295 107 YFD-NV---G-------GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 107 vid-~~---g-------~~~~~~~~~~l~~~G~~v~~g 133 (223)
|+- .. + .+.++.+.+.|+++|.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 863 32 1 134567889999999998763
No 341
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.21 E-value=0.21 Score=38.75 Aligned_cols=92 Identities=15% Similarity=0.128 Sum_probs=65.3
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+||+.......|..+. -.|++|+|. ..+|.-.+.+....|++|+..... .. ++
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~--------------------t~-~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK--------------------TR-DL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC--------------------CC-CH
Confidence 45666666666666666 689999999 455999999999999999874321 11 33
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
.+.+++ .|+|+-++|.+.+- .-+.++++..++.+|...
T Consensus 196 ~~~~~~-----ADIVV~avG~~~~i-~~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 196 AAHTRQ-----ADIVVAAVGKRNVL-TADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHhhh-----CCEEEEcCCCcCcc-CHHHcCCCCEEEEccccc
Confidence 333333 89999999975432 237899999999998643
No 342
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.20 E-value=0.24 Score=38.45 Aligned_cols=91 Identities=16% Similarity=0.074 Sum_probs=64.3
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE--C-chHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS--G-AYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~--g-~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+|++....+..|..+. -.|++|+|. | .+|.-++.+....|++|+... +..+ ++
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h-s~t~--------------------~l 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH-ILTK--------------------DL 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe-CCcH--------------------HH
Confidence 45666666676676666 579999999 4 899999999999999987753 2111 22
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+++ .|+++-++|.+.+- .-+.+++|..++.+|..
T Consensus 195 ~~~~~~-----ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 195 SFYTQN-----ADIVCVGVGKPDLI-KASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHh-----CCEEEEecCCCCcC-CHHHcCCCcEEEEeecc
Confidence 222322 89999999975432 24466999999999864
No 343
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.19 E-value=0.21 Score=38.67 Aligned_cols=65 Identities=15% Similarity=0.113 Sum_probs=46.3
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
..+++++|. |+.+++++.-++..|+ +|+.+.|++++.+.+.+.++.. +.+.+. ...+|+|++|+
T Consensus 120 ~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvINaT 186 (272)
T PRK12550 120 PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILVNVT 186 (272)
T ss_pred CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEEECC
Confidence 445689988 9999999988888998 6999999998877766444321 111110 12589999998
Q ss_pred C
Q 043295 112 G 112 (223)
Q Consensus 112 g 112 (223)
.
T Consensus 187 p 187 (272)
T PRK12550 187 P 187 (272)
T ss_pred c
Confidence 5
No 344
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.19 E-value=0.13 Score=39.07 Aligned_cols=76 Identities=21% Similarity=0.319 Sum_probs=45.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH--HHHHHHHhhCCCe-e--eecCCcccHHHHHHHhCC--CCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE--KVAILKEKLGFDD-A--FNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~--~~~~~~~~~g~~~-~--~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++++++|. |++|.+.++.....|++|+.+.++.. ..+.++ ..+... . .|-.+.++....+.+... +++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46889999 89999999988889999998875432 223333 334211 1 233322122222332221 2699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++++.|
T Consensus 88 ~li~~Ag 94 (253)
T PRK08993 88 ILVNNAG 94 (253)
T ss_pred EEEECCC
Confidence 9999887
No 345
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.19 E-value=0.66 Score=35.47 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=61.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCC-CCccEEEcCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFP-DGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-~~~d~vid~~ 111 (223)
.++++||=. .|.|..+..+++.. +.+|++++.++.-.+.+++.+.....+.. +.. .... +.+|+|+...
T Consensus 30 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~----~~~~~~~fD~v~~~~ 101 (258)
T PRK01683 30 ENPRYVVDLGCGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIA----SWQPPQALDLIFANA 101 (258)
T ss_pred cCCCEEEEEcccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chh----ccCCCCCccEEEEcc
Confidence 677888888 88899999999876 56999999999888888733321112211 111 1112 2689887543
Q ss_pred C-----h--HHHHHHHHhhccCcEEEEE
Q 043295 112 G-----G--EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 112 g-----~--~~~~~~~~~l~~~G~~v~~ 132 (223)
. . ..+....+.|++||.++..
T Consensus 102 ~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 102 SLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred ChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 2 2 3577888999999998875
No 346
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.18 E-value=0.19 Score=38.86 Aligned_cols=93 Identities=13% Similarity=0.133 Sum_probs=58.3
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-eeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
.++++++|. |++|.+++......|++|+.+.++.++.+.+.+.++.. .+... .+.+ .....+|+|++|+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~----~~~~----~~~~~~DivInat 186 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF----SMDE----LPLHRVDLIINAT 186 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe----chhh----hcccCccEEEECC
Confidence 457889998 89998888877788999999999887766554344321 11100 1111 1112589999999
Q ss_pred ChHH---HH---HHHHhhccCcEEEEEccc
Q 043295 112 GGEM---LE---AAVANMNLFGRVAACGVI 135 (223)
Q Consensus 112 g~~~---~~---~~~~~l~~~G~~v~~g~~ 135 (223)
+... .. .....++++..++.+...
T Consensus 187 p~gm~~~~~~~~~~~~~l~~~~~v~D~~y~ 216 (270)
T TIGR00507 187 SAGMSGNIDEPPVPAEKLKEGMVVYDMVYN 216 (270)
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 7521 11 123456777778777543
No 347
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.15 E-value=0.16 Score=39.01 Aligned_cols=77 Identities=16% Similarity=0.263 Sum_probs=45.9
Q ss_pred CCCEEEEE--C---chHHHHHHHHHHcCCeEEEEecCHH---HHHHHHHhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS--G---AYGHLVGQYAKLGGCYVVGSAGTNE---KVAILKEKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~--g---~vG~~a~qla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++++|+ + ++|.+.++.....|++|+.++++++ ..+.+.++.+.... .|-.+.++....+.+... +.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 46788999 2 6999988888889999998887632 22223212222111 243333233333333322 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999887
No 348
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.15 Score=39.69 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=46.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH---------HHHHHHHHhh---CCCee---eecCCcccHHHHHH
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN---------EKVAILKEKL---GFDDA---FNYKEETDLKATLK 97 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~~~---~~~~~~~~~~~~i~ 97 (223)
++++++|+ +++|.+.++.....|++|+.++++. ++.+.+.+++ |.... .|-.+.++..+.+.
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 46789999 8999999988888999999887654 3333332233 32211 23333212333333
Q ss_pred HhCC--CCccEEEcCCC
Q 043295 98 RYFP--DGIDVYFDNVG 112 (223)
Q Consensus 98 ~~~~--~~~d~vid~~g 112 (223)
+... +.+|+++++.|
T Consensus 85 ~~~~~~g~id~lv~nAG 101 (286)
T PRK07791 85 AAVETFGGLDVLVNNAG 101 (286)
T ss_pred HHHHhcCCCCEEEECCC
Confidence 3221 36999999887
No 349
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.15 E-value=0.1 Score=38.39 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=53.1
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
-.|.+++|. |.+|..+++.+...|++|++++.++++.+.+.+.+|+. .++.. ++. ...+|+++-|..
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l~-------~~~~Dv~vp~A~ 94 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EIY-------SVDADVFAPCAL 94 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hhc-------cccCCEEEeccc
Confidence 457889999 99999999999999999999998888877776455653 22221 111 114888886654
Q ss_pred h-HHHHHHHHhhc
Q 043295 113 G-EMLEAAVANMN 124 (223)
Q Consensus 113 ~-~~~~~~~~~l~ 124 (223)
+ ..-...+..++
T Consensus 95 ~~~I~~~~~~~l~ 107 (200)
T cd01075 95 GGVINDDTIPQLK 107 (200)
T ss_pred ccccCHHHHHHcC
Confidence 3 22333444443
No 350
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.13 E-value=0.16 Score=38.63 Aligned_cols=76 Identities=16% Similarity=0.212 Sum_probs=46.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH-HHHHHHHHhhCCCe-eeecCCcccHHHHHHHhCC--CCccEEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN-EKVAILKEKLGFDD-AFNYKEETDLKATLKRYFP--DGIDVYF 108 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vi 108 (223)
.+++++|. |++|...++.....|++|+.+.++. +..+.++ ..+... ..|-.+..+..+.+.+... +++|+++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46788999 8999999988888899998876543 3344444 333322 1343333233333333221 3689999
Q ss_pred cCCC
Q 043295 109 DNVG 112 (223)
Q Consensus 109 d~~g 112 (223)
.+.|
T Consensus 85 ~~ag 88 (255)
T PRK06463 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 8886
No 351
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.13 E-value=0.11 Score=39.58 Aligned_cols=77 Identities=14% Similarity=0.194 Sum_probs=47.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCC-e--eeecCCcccHHHHHHHhCC--CC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFD-D--AFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
-.++++||. |++|...++.....|++|+.++++ ++.+.+.+ +.+.. . ..|-.+.+.....+.+... ++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999 899999998888899999999877 33333321 23322 1 1333333122222322221 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 92 id~li~~ag 100 (258)
T PRK06935 92 IDILVNNAG 100 (258)
T ss_pred CCEEEECCC
Confidence 899998876
No 352
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.22 Score=38.48 Aligned_cols=78 Identities=17% Similarity=0.162 Sum_probs=47.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHH---hhCCCee---eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKE---KLGFDDA---FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~---~~g~~~~---~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
+.++++|+ |++|...++.+...|++|+.++++..+.+.+.+ ..+.... .|..+..++.+.+.+... +++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34688999 899999998888889999999987765543331 2233211 233333122222222211 368
Q ss_pred cEEEcCCCh
Q 043295 105 DVYFDNVGG 113 (223)
Q Consensus 105 d~vid~~g~ 113 (223)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999988863
No 353
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.099 Score=39.12 Aligned_cols=71 Identities=21% Similarity=0.179 Sum_probs=46.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-eeeecCCcccHHHHHHHhCCC-CccEEEcC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DAFNYKEETDLKATLKRYFPD-GIDVYFDN 110 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 110 (223)
++++++|. |++|...++.....|++|+.++++..+ . .... ...|..+.+...+.+.+.... ++|+++.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 35788999 899999998888889999999987654 1 1111 123444332333334333333 68999998
Q ss_pred CC
Q 043295 111 VG 112 (223)
Q Consensus 111 ~g 112 (223)
.|
T Consensus 76 ag 77 (234)
T PRK07577 76 VG 77 (234)
T ss_pred CC
Confidence 87
No 354
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.10 E-value=0.44 Score=34.45 Aligned_cols=94 Identities=19% Similarity=0.176 Sum_probs=59.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
-++++||=. +|.|..+..+++.. +.+|++++.+++..+.+++ +.|.+.+ ..-.. +..+ + ...+.+|+|+-
T Consensus 41 ~~~~~vLDiGcGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~-d~~~-~--~~~~~fD~I~s 115 (181)
T TIGR00138 41 LDGKKVIDIGSGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNG-RAED-F--QHEEQFDVITS 115 (181)
T ss_pred cCCCeEEEecCCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEec-chhh-c--cccCCccEEEe
Confidence 347787777 78898888888765 4599999999876655542 3454332 11111 2222 2 11237998875
Q ss_pred CCC-h--HHHHHHHHhhccCcEEEEEc
Q 043295 110 NVG-G--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 ~~g-~--~~~~~~~~~l~~~G~~v~~g 133 (223)
..- . +.++.+.++|+++|.++..-
T Consensus 116 ~~~~~~~~~~~~~~~~LkpgG~lvi~~ 142 (181)
T TIGR00138 116 RALASLNVLLELTLNLLKVGGYFLAYK 142 (181)
T ss_pred hhhhCHHHHHHHHHHhcCCCCEEEEEc
Confidence 432 1 34566788999999998763
No 355
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.10 E-value=0.16 Score=38.47 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=33.1
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAIL 74 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~ 74 (223)
.++++++|. |++|...++.....|++|+.++++.++.+.+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~ 52 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAV 52 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Confidence 567899999 8899988888778899999999988765444
No 356
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.10 E-value=0.36 Score=37.69 Aligned_cols=62 Identities=16% Similarity=0.188 Sum_probs=46.8
Q ss_pred hHHHHHHHHh-----hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEe---cCHHHHHHHHHhhCCCeeeecC
Q 043295 25 TAYVGFYEIS-----QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSA---GTNEKVAILKEKLGFDDAFNYK 87 (223)
Q Consensus 25 ta~~~l~~~~-----~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~---~~~~~~~~~~~~~g~~~~~~~~ 87 (223)
.|++.+.... +||.+|+=- |..|.+++.+|+..|++++.+. .|.++.+.++ .+|+..++...
T Consensus 45 ~A~~mI~~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~-a~GAevi~t~~ 116 (300)
T COG0031 45 IALYMIEDAEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLR-ALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HcCCEEEEcCC
Confidence 5666666554 778865544 9999999999999999877776 4677888888 89986655443
No 357
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.09 E-value=0.19 Score=38.27 Aligned_cols=99 Identities=17% Similarity=0.087 Sum_probs=58.0
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh-hCCCee-eecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK-LGFDDA-FNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
.++.+|+|+ |.+|..+++.+...|++|+++.+++++....... .++..+ .|..+. .+.+.+....++|+||.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVIC 91 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEE
Confidence 346789999 7899999888877899999999887765433211 112211 233321 12233333226999998
Q ss_pred CCChH--------------HHHHHHHhhcc--CcEEEEEcccc
Q 043295 110 NVGGE--------------MLEAAVANMNL--FGRVAACGVIS 136 (223)
Q Consensus 110 ~~g~~--------------~~~~~~~~l~~--~G~~v~~g~~~ 136 (223)
+.|.. .....++.+.. .++++.++...
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 87631 12233443432 36888877653
No 358
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.26 Score=37.52 Aligned_cols=71 Identities=18% Similarity=0.299 Sum_probs=45.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH-HHHHHHHhhCCCee--eecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE-KVAILKEKLGFDDA--FNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~-~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
-.+++++|+ |++|...++.....|++|+.+++++. ..+... .+.... .|-.+. +.+.+.. +++|+++
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~----~~~~~~~-~~iDilV 84 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKE----ESLDKQL-ASLDVLI 84 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCH----HHHHHhc-CCCCEEE
Confidence 356899999 78999999988889999999998762 222111 111122 233322 2233333 3599999
Q ss_pred cCCC
Q 043295 109 DNVG 112 (223)
Q Consensus 109 d~~g 112 (223)
++.|
T Consensus 85 nnAG 88 (245)
T PRK12367 85 LNHG 88 (245)
T ss_pred ECCc
Confidence 9887
No 359
>PRK07574 formate dehydrogenase; Provisional
Probab=95.08 E-value=0.17 Score=41.19 Aligned_cols=86 Identities=13% Similarity=0.023 Sum_probs=51.6
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
.|++|.|+ |.+|...++.++..|.+|++.+++....+..+ .+|.... . ++.+.+. ..|+|+-+...
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~lPl 258 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTYH----V--SFDSLVS-----VCDVVTIHCPL 258 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCceec----C--CHHHHhh-----cCCEEEEcCCC
Confidence 45678888 99999999999999999999997753333333 4443211 0 2222222 25666655542
Q ss_pred -H-H---H-HHHHHhhccCcEEEEEc
Q 043295 114 -E-M---L-EAAVANMNLFGRVAACG 133 (223)
Q Consensus 114 -~-~---~-~~~~~~l~~~G~~v~~g 133 (223)
+ + + ...+..|+++..+|.++
T Consensus 259 t~~T~~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 259 HPETEHLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred CHHHHHHhCHHHHhcCCCCcEEEECC
Confidence 1 1 1 23455666666666554
No 360
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.05 E-value=0.2 Score=40.07 Aligned_cols=84 Identities=20% Similarity=0.136 Sum_probs=51.9
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
.|++|.|. |.+|...++.++..|.+|++.+++.... ... ..|... . ++.+.+.+ .|+|+-++..
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~------~-~l~ell~~-----aDiV~l~lP~ 214 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAEY------R-PLEELLRE-----SDFVSLHVPL 214 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCEe------c-CHHHHHhh-----CCEEEEeCCC
Confidence 46789999 9999999999999999999998765442 222 344311 1 23333322 5666665542
Q ss_pred -H-H----HHHHHHhhccCcEEEEEc
Q 043295 114 -E-M----LEAAVANMNLFGRVAACG 133 (223)
Q Consensus 114 -~-~----~~~~~~~l~~~G~~v~~g 133 (223)
+ + -...+..|+++..++.++
T Consensus 215 t~~T~~~i~~~~~~~mk~ga~lIN~a 240 (333)
T PRK13243 215 TKETYHMINEERLKLMKPTAILVNTA 240 (333)
T ss_pred ChHHhhccCHHHHhcCCCCeEEEECc
Confidence 1 1 124555666666666655
No 361
>PRK06398 aldose dehydrogenase; Validated
Probab=95.05 E-value=0.047 Score=41.76 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=45.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCC--CCccEEEcC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFP--DGIDVYFDN 110 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~--~~~d~vid~ 110 (223)
.++++||+ +++|.+.+......|++|+.+++++.+...+. ....|-.+..+..+.+.+... +++|+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 46789999 79999999988889999999997754322111 111233333233333333322 269999988
Q ss_pred CC
Q 043295 111 VG 112 (223)
Q Consensus 111 ~g 112 (223)
.|
T Consensus 80 Ag 81 (258)
T PRK06398 80 AG 81 (258)
T ss_pred CC
Confidence 76
No 362
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.01 E-value=0.11 Score=40.35 Aligned_cols=126 Identities=17% Similarity=0.095 Sum_probs=81.3
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCc----------ccHHHHHHHhCC-
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEE----------TDLKATLKRYFP- 101 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~i~~~~~- 101 (223)
.++..+++. |..|+.++-.++..|+-|......+.+-+..+ ++|+...--.+++ .+|..+-.++..
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 344556666 89999999999999999999998888878887 7887433111110 123333222222
Q ss_pred C--CccEEEcCC---ChH----HHHHHHHhhccCcEEEEEcccccccccccCCCCchHHHHhhcceEEeeec
Q 043295 102 D--GIDVYFDNV---GGE----MLEAAVANMNLFGRVAACGVISECADASKRAVPNMIDIVYKRIKIQGFLS 164 (223)
Q Consensus 102 ~--~~d~vid~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 164 (223)
. ++|+||-+. |.+ ......+.|+||..+|.+....+.+-+... .......+++++.|...
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~---pg~~v~~~gV~iig~~n 309 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTE---PGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCccccc---CCeEEEeCCeEEEeecC
Confidence 2 799999876 322 356788999999999998876554432211 11333456777777553
No 363
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.01 E-value=0.24 Score=38.59 Aligned_cols=92 Identities=20% Similarity=0.032 Sum_probs=57.0
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCC----CeeeecCCcccHHHHHHHhCCCCccEE
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGF----DDAFNYKEETDLKATLKRYFPDGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~~~d~v 107 (223)
..+++|+|. |++|.+++..+...|+ +|+.+.++.++.+.+.+.++. ..+.... ++.+.+ ..+|+|
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV 196 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL 196 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence 456789999 9999999999999998 899999998887766544432 1121111 222111 248999
Q ss_pred EcCCCh-----HHHHHHHHhhccCcEEEEEcc
Q 043295 108 FDNVGG-----EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 108 id~~g~-----~~~~~~~~~l~~~G~~v~~g~ 134 (223)
++|+.. +........++++..+..+-.
T Consensus 197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY 228 (284)
T PRK12549 197 VHATPTGMAKHPGLPLPAELLRPGLWVADIVY 228 (284)
T ss_pred EECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence 999631 111112245666666655543
No 364
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.25 Score=38.21 Aligned_cols=75 Identities=20% Similarity=0.252 Sum_probs=46.4
Q ss_pred CCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-ee--eecCCcccHHHHHHHhC-CCCccEE
Q 043295 37 GEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-DA--FNYKEETDLKATLKRYF-PDGIDVY 107 (223)
Q Consensus 37 g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~i~~~~-~~~~d~v 107 (223)
++.++|. |++|.+++.... .|++|+.+++++++.+.+.+++ |.. .. .|-.+.+.....+.... -+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 3567777 889988887774 7999999999877665443233 321 11 34444322333333221 1379999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
+.+.|
T Consensus 81 i~nAG 85 (275)
T PRK06940 81 VHTAG 85 (275)
T ss_pred EECCC
Confidence 99887
No 365
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.00 E-value=1 Score=33.20 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=64.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCC-CCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFP-DGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~-~~~d~vi 108 (223)
.++.+||-. .|.|..+..+++.. +.+|++++.+++..+.+++.+ +...+- .... +..+.+..... +.+|.|+
T Consensus 39 ~~~~~VLDiGcGtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~-d~~~~l~~~~~~~~~D~V~ 116 (202)
T PRK00121 39 NDAPIHLEIGFGKGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCG-DAVEVLLDMFPDGSLDRIY 116 (202)
T ss_pred CCCCeEEEEccCCCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEec-CHHHHHHHHcCccccceEE
Confidence 556777777 88899999998876 469999999999888776332 332221 1112 33234433333 3688886
Q ss_pred cCCC---------------hHHHHHHHHhhccCcEEEEEc
Q 043295 109 DNVG---------------GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 109 d~~g---------------~~~~~~~~~~l~~~G~~v~~g 133 (223)
-... ...+..+.+.|+++|.++...
T Consensus 117 ~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 117 LNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred EECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 4221 235778889999999998764
No 366
>PLN03139 formate dehydrogenase; Provisional
Probab=94.99 E-value=0.2 Score=40.76 Aligned_cols=86 Identities=24% Similarity=0.178 Sum_probs=52.1
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
.|++|.|. |.+|...++.++..|.+|++.+++....+... +.|+..+ + ++.+.+.+ .|+|+-+...
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----sDvV~l~lPl 265 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE----E--DLDAMLPK-----CDVVVINTPL 265 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec----C--CHHHHHhh-----CCEEEEeCCC
Confidence 46788888 99999999999999999999887643333333 4443211 1 23333222 5666555542
Q ss_pred -H-H----HHHHHHhhccCcEEEEEc
Q 043295 114 -E-M----LEAAVANMNLFGRVAACG 133 (223)
Q Consensus 114 -~-~----~~~~~~~l~~~G~~v~~g 133 (223)
+ + -...+..|+++..+|.++
T Consensus 266 t~~T~~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 266 TEKTRGMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred CHHHHHHhCHHHHhhCCCCeEEEECC
Confidence 1 1 123455666666666554
No 367
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=94.97 E-value=1.2 Score=34.94 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=68.3
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh-CC---CeeeecCCccc---HHHHHHHhCCC-C
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL-GF---DDAFNYKEETD---LKATLKRYFPD-G 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~---~~~~i~~~~~~-~ 103 (223)
.+++.|+|+ ++.|..++.-+...|.+|++.|..++..+.++.+. .. +..+|-.++++ ..+.+++..++ |
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 566779999 89999988888889999999997777666665232 11 12244444312 33445566666 7
Q ss_pred ccEEEcCCC-h--------------------------HHHHHHHHhhc-cCcEEEEEccccccc
Q 043295 104 IDVYFDNVG-G--------------------------EMLEAAVANMN-LFGRVAACGVISECA 139 (223)
Q Consensus 104 ~d~vid~~g-~--------------------------~~~~~~~~~l~-~~G~~v~~g~~~~~~ 139 (223)
.--++++.| . ......+.+++ ..||+|.++...+..
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~ 170 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV 170 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc
Confidence 777788777 1 01122334554 569999999877643
No 368
>PLN02823 spermine synthase
Probab=94.97 E-value=1.1 Score=35.88 Aligned_cols=96 Identities=22% Similarity=0.270 Sum_probs=61.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCC-eeee-cC----CcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFD-DAFN-YK----EETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~~~~-~~----~~~~~~~~i~~~~~~~~d~ 106 (223)
...++|||. ||-|..+.++++..+. +|+++..+++-.+.+++.++.. ..++ .+ .. +-...++. .++.+|+
T Consensus 102 ~~pk~VLiiGgG~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~-Da~~~L~~-~~~~yDv 179 (336)
T PLN02823 102 PNPKTVFIMGGGEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIN-DARAELEK-RDEKFDV 179 (336)
T ss_pred CCCCEEEEECCCchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEC-hhHHHHhh-CCCCccE
Confidence 456799999 8889888888887655 8999999998888888444321 1111 10 11 23334432 3347998
Q ss_pred EE-cCCC----h--------HHHH-HHHHhhccCcEEEEE
Q 043295 107 YF-DNVG----G--------EMLE-AAVANMNLFGRVAAC 132 (223)
Q Consensus 107 vi-d~~g----~--------~~~~-~~~~~l~~~G~~v~~ 132 (223)
|| |+.. + +-+. .+.+.|+++|.++.-
T Consensus 180 Ii~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 180 IIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred EEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 85 4321 1 2355 678899999998754
No 369
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=94.97 E-value=0.36 Score=40.01 Aligned_cols=95 Identities=20% Similarity=0.262 Sum_probs=62.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHH---hhCCC-eeeecCCcccHHHHHHHhCC-CCccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKE---KLGFD-DAFNYKEETDLKATLKRYFP-DGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~---~~g~~-~~~~~~~~~~~~~~i~~~~~-~~~d~v 107 (223)
++|++||=. .+.|..+..+++..+ .+|++++.+++..+.+++ .+|.. .++..+-. + ...... +.||.|
T Consensus 243 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~-~----~~~~~~~~~fD~V 317 (427)
T PRK10901 243 QNGERVLDACAAPGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDAR-D----PAQWWDGQPFDRI 317 (427)
T ss_pred CCCCEEEEeCCCCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcc-c----chhhcccCCCCEE
Confidence 788888777 788888888888775 699999999998877753 23443 22221111 1 111112 369988
Q ss_pred E-c--CCCh--------------------------HHHHHHHHhhccCcEEEEEcc
Q 043295 108 F-D--NVGG--------------------------EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 108 i-d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~ 134 (223)
+ | |+|. ..+..++..|++||+++....
T Consensus 318 l~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvystc 373 (427)
T PRK10901 318 LLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYATC 373 (427)
T ss_pred EECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 6 3 3331 245677889999999987653
No 370
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=94.95 E-value=0.3 Score=34.03 Aligned_cols=96 Identities=20% Similarity=0.258 Sum_probs=63.0
Q ss_pred CCCEEEEE-CchHHHHHHHHHHc--CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 36 KGEKVFVS-GAYGHLVGQYAKLG--GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 36 ~g~~vlI~-g~vG~~a~qla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
++.+||=. .|.|.....+++.. +.++++++.+++-.+.+++ +++.+.+--... ++.+ +.+...+.+|+|+.
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~--d~~~-l~~~~~~~~D~I~~ 79 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQG--DIED-LPQELEEKFDIIIS 79 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEES--BTTC-GCGCSSTTEEEEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEEe--ehhc-cccccCCCeeEEEE
Confidence 45666666 88999999999644 6799999999998888773 356653211111 2222 22111146999987
Q ss_pred CC-----Ch--HHHHHHHHhhccCcEEEEEcc
Q 043295 110 NV-----GG--EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 110 ~~-----g~--~~~~~~~~~l~~~G~~v~~g~ 134 (223)
.. .. ..++...++++++|.++....
T Consensus 80 ~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 80 NGVLHHFPDPEKVLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp ESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 53 22 257788999999999987654
No 371
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.94 E-value=0.14 Score=38.98 Aligned_cols=76 Identities=17% Similarity=0.136 Sum_probs=46.9
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCC--ee--eecCCcccHHHHHHHhCC--CC
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFD--DA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~--~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++||. |++|...++.....|++|+.++++..+.+.+.+++ +.. .. .|..+.++....+.+... ++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999 79999999888888999999998877654443222 211 11 233332122222222211 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999886
No 372
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=94.94 E-value=0.043 Score=42.87 Aligned_cols=104 Identities=20% Similarity=0.199 Sum_probs=63.8
Q ss_pred hHHHHHHHHh---hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHH---hhCCCeeee-cCCcccHHHH
Q 043295 25 TAYVGFYEIS---QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKE---KLGFDDAFN-YKEETDLKAT 95 (223)
Q Consensus 25 ta~~~l~~~~---~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~~~~-~~~~~~~~~~ 95 (223)
|-..+|..+. .+|++||=. .|.|..++-.++ +|+ +|++++-.+.-.+.+++ ..|...-+. .... +
T Consensus 147 TT~lcl~~l~~~~~~g~~vLDvG~GSGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~---- 220 (295)
T PF06325_consen 147 TTRLCLELLEKYVKPGKRVLDVGCGSGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-D---- 220 (295)
T ss_dssp HHHHHHHHHHHHSSTTSEEEEES-TTSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-C----
T ss_pred HHHHHHHHHHHhccCCCEEEEeCCcHHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-c----
Confidence 3334444444 788998888 788887776666 487 89999988776555542 233322111 1111 1
Q ss_pred HHHhCCCCccEEEcCCChHH----HHHHHHhhccCcEEEEEccccc
Q 043295 96 LKRYFPDGIDVYFDNVGGEM----LEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 96 i~~~~~~~~d~vid~~g~~~----~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
...+.||+|+-.+-.+. .....++++++|.++..|....
T Consensus 221 ---~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 221 ---LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp ---TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred ---cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 11247999998887653 3344568899999999998764
No 373
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.93 E-value=0.39 Score=37.30 Aligned_cols=91 Identities=14% Similarity=0.075 Sum_probs=65.7
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE--C-chHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS--G-AYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~--g-~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-.||+....+..|.... -.|++++|. | .+|.-++++....|++|+...+.- . ++
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T--------------------~-~l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT--------------------K-NL 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC--------------------C-CH
Confidence 35666666677776666 579999999 4 599999999999999998765321 1 23
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+++ .|+++.++|.+.+- .-+.++++..++.+|..
T Consensus 197 ~~~~~~-----ADIvi~avG~p~~v-~~~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRN-----ADLLVVAVGKPGFI-PGEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhh-----CCEEEEcCCCcccc-cHHHcCCCcEEEEcccc
Confidence 333333 89999999975432 23778999999999854
No 374
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.91 E-value=0.27 Score=40.39 Aligned_cols=72 Identities=22% Similarity=0.362 Sum_probs=45.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-ee--eecCCcccHHHHHHHhCCCCccEEEc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DA--FNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
++++++|. |++|.+.++.....|++|+++++++++.+...+..+.. .. .|..+. +.+.+.. +++|+++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~----~~v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE----AALAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH----HHHHHHh-CCCCEEEE
Confidence 57899999 88999999888888999999998876654322111111 11 233332 2233332 25999998
Q ss_pred CCC
Q 043295 110 NVG 112 (223)
Q Consensus 110 ~~g 112 (223)
+.|
T Consensus 252 nAG 254 (406)
T PRK07424 252 NHG 254 (406)
T ss_pred CCC
Confidence 776
No 375
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.91 E-value=0.18 Score=38.54 Aligned_cols=77 Identities=19% Similarity=0.247 Sum_probs=46.1
Q ss_pred CCCEEEEE-C----chHHHHHHHHHHcCCeEEEEecCH--HHHHHHHHhhCCC---eeeecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS-G----AYGHLVGQYAKLGGCYVVGSAGTN--EKVAILKEKLGFD---DAFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~-g----~vG~~a~qla~~~g~~v~~~~~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
.+++++|+ + ++|.+.++.....|++|+.++++. +..+.+.++++.. ...|-.+.++..+.+.+... ++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 46788888 4 788888888788899999988653 3344444344431 11333333122222222221 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 86 iD~li~nAG 94 (256)
T PRK07889 86 LDGVVHSIG 94 (256)
T ss_pred CcEEEEccc
Confidence 999998776
No 376
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=94.90 E-value=0.77 Score=38.32 Aligned_cols=95 Identities=21% Similarity=0.220 Sum_probs=61.7
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc--CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCC-CccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG--GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPD-GIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~v 107 (223)
.+|++||=. .+.|..+..+++.. +.+|++++.++++.+.+++ .+|.+.+ ..... +.. ..... .||.|
T Consensus 249 ~~g~~VLDlgaG~G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v-~~~~~-Da~----~~~~~~~fD~V 322 (445)
T PRK14904 249 QPGSTVLDLCAAPGGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITII-ETIEG-DAR----SFSPEEQPDAI 322 (445)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeE-EEEeC-ccc----ccccCCCCCEE
Confidence 678888777 77788777777765 3599999999998876653 3465432 11111 111 11122 69988
Q ss_pred E-c--CCCh--------------------------HHHHHHHHhhccCcEEEEEccc
Q 043295 108 F-D--NVGG--------------------------EMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 108 i-d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
+ | |+|. ..+..++..|++||+++.....
T Consensus 323 l~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvystcs 379 (445)
T PRK14904 323 LLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYATCS 379 (445)
T ss_pred EEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 6 4 5442 1356777899999999986643
No 377
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.89 E-value=0.79 Score=34.60 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=57.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecC-HHHHH----HHHHhhCCC-ee--eecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGT-NEKVA----ILKEKLGFD-DA--FNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~-~~~~~----~~~~~~g~~-~~--~~~~~~~~~~~~i~~~~~--~ 102 (223)
.+.++||. |++|...++-....|++|+.++++ ..+.. .++ ..+.. .. .|..+.+++...+.+... +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 35789999 889998888777899998776643 22222 222 23322 11 233333122222332221 3
Q ss_pred CccEEEcCCCh-----------HH---------------HHHHHHhhccCcEEEEEccccc
Q 043295 103 GIDVYFDNVGG-----------EM---------------LEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 103 ~~d~vid~~g~-----------~~---------------~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
++|++|.+.|. +. .+.+...++..|+++.++....
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 68999998872 00 1123445566789998887554
No 378
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=94.88 E-value=0.26 Score=37.21 Aligned_cols=96 Identities=20% Similarity=0.255 Sum_probs=59.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHhh---CCCee--eecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEKL---GFDDA--FNYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~~--~~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
++|++||=. +|.|..+..+++..+ .+|++++-++.-++.++++. +...+ +..+.. ++. +.++-+|+
T Consensus 46 ~~g~~vLDv~~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~lp-----~~d~sfD~ 119 (233)
T PF01209_consen 46 RPGDRVLDVACGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DLP-----FPDNSFDA 119 (233)
T ss_dssp -S--EEEEET-TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B-------S-TT-EEE
T ss_pred CCCCEEEEeCCChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hhc-----CCCCceeE
Confidence 788888888 899999999999875 59999999999888777432 22222 111111 110 11125999
Q ss_pred EEcCCCh-------HHHHHHHHhhccCcEEEEEcccc
Q 043295 107 YFDNVGG-------EMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 107 vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
|.-+.|= ..+....+.|+|||+++.+....
T Consensus 120 v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~ 156 (233)
T PF01209_consen 120 VTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK 156 (233)
T ss_dssp EEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred EEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence 9866652 25788999999999998877543
No 379
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.87 E-value=0.15 Score=39.66 Aligned_cols=73 Identities=11% Similarity=-0.084 Sum_probs=48.5
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCC-eeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFD-DAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
++++++|. |+.|.+++..+...|+ +|+.+.|+.++.+.+.+.++.. .+.... ..+.+.... ..+|+||+|+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~~~~~~~~-~~~DiVInaT 198 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GDSGGLAIE-KAAEVLVSTV 198 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----chhhhhhcc-cCCCEEEECC
Confidence 46789999 9999999998889998 7999999988877766455421 111111 101111111 2589999998
Q ss_pred Ch
Q 043295 112 GG 113 (223)
Q Consensus 112 g~ 113 (223)
..
T Consensus 199 p~ 200 (282)
T TIGR01809 199 PA 200 (282)
T ss_pred CC
Confidence 74
No 380
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.87 E-value=0.19 Score=39.56 Aligned_cols=58 Identities=21% Similarity=0.276 Sum_probs=46.7
Q ss_pred hHHHHHHHHh-----hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEec---CHHHHHHHHHhhCCCee
Q 043295 25 TAYVGFYEIS-----QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAG---TNEKVAILKEKLGFDDA 83 (223)
Q Consensus 25 ta~~~l~~~~-----~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~---~~~~~~~~~~~~g~~~~ 83 (223)
-||.++..+- .||.++||- |..|...+-+|+..|++++.+.. +.+|...++ .+|+.-+
T Consensus 86 ia~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~-a~Gaeii 154 (362)
T KOG1252|consen 86 IAWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLR-ALGAEII 154 (362)
T ss_pred HHHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHH-HcCCEEE
Confidence 4566665554 889999999 99999999999999999988873 456778888 8998655
No 381
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.87 E-value=1.2 Score=34.33 Aligned_cols=96 Identities=17% Similarity=0.146 Sum_probs=61.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
++|++||=. .+.|..+..++...+ .+|++++.++.+.+.+++ .+|...+.-... +.. .+... .+.+|.|+
T Consensus 70 ~~g~~VLDl~ag~G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~--D~~-~~~~~-~~~fD~Vl 145 (264)
T TIGR00446 70 DPPERVLDMAAAPGGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF--DGR-VFGAA-VPKFDAIL 145 (264)
T ss_pred CCcCEEEEECCCchHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC--CHH-Hhhhh-ccCCCEEE
Confidence 788887777 788888888888763 489999999998877763 345543221111 211 11111 12589886
Q ss_pred -c--CCCh--------------------------HHHHHHHHhhccCcEEEEEcc
Q 043295 109 -D--NVGG--------------------------EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 109 -d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~ 134 (223)
| |+|. +.+..++.++++||+++....
T Consensus 146 ~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYstc 200 (264)
T TIGR00446 146 LDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYSTC 200 (264)
T ss_pred EcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 4 3432 145567889999999986654
No 382
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.85 E-value=1 Score=32.59 Aligned_cols=92 Identities=14% Similarity=0.217 Sum_probs=60.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
.++.+||=. +|.|..+..+++.. +.+|++++.+++..+.+++ .++...+ ..... +... ...+.+|+|+.
T Consensus 30 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i-~~~~~-d~~~----~~~~~~D~v~~ 103 (187)
T PRK08287 30 HRAKHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNI-DIIPG-EAPI----ELPGKADAIFI 103 (187)
T ss_pred CCCCEEEEECCcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCe-EEEec-Cchh----hcCcCCCEEEE
Confidence 677887777 78899999998876 4699999999987776653 2343222 11111 1111 11236999885
Q ss_pred CCC-h---HHHHHHHHhhccCcEEEEE
Q 043295 110 NVG-G---EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 110 ~~g-~---~~~~~~~~~l~~~G~~v~~ 132 (223)
... . ..+..+.+.|+++|+++..
T Consensus 104 ~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 104 GGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 332 1 3567788999999998764
No 383
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.84 E-value=0.17 Score=38.74 Aligned_cols=77 Identities=13% Similarity=0.246 Sum_probs=45.8
Q ss_pred CCCEEEEE-C----chHHHHHHHHHHcCCeEEEEecC---HHHHHHHHHhhCCCee--eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS-G----AYGHLVGQYAKLGGCYVVGSAGT---NEKVAILKEKLGFDDA--FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~-g----~vG~~a~qla~~~g~~v~~~~~~---~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~--~~ 103 (223)
.+++++|. + ++|.+.++.....|++|+.+.+. +++.+.+.++++.... .|-.+.++....+.+... ++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 46788888 2 68999888888899999887543 3333333324443222 333333233333333322 37
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++++.|
T Consensus 85 iD~lvnnAG 93 (260)
T PRK06997 85 LDGLVHSIG 93 (260)
T ss_pred CcEEEEccc
Confidence 999998876
No 384
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.84 E-value=0.15 Score=40.85 Aligned_cols=73 Identities=22% Similarity=0.296 Sum_probs=46.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC----Cee-eecCCcccHHHHHHHhCCC-CccE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF----DDA-FNYKEETDLKATLKRYFPD-GIDV 106 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~----~~~-~~~~~~~~~~~~i~~~~~~-~~d~ 106 (223)
++++|||+ |.+|..+++.....|.+|++++++........+.++. ..+ .|-.+ .+.+.+...+ ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD----AAKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC----HHHHHHHHhhcCCCE
Confidence 46889999 7899999998888999999998766543222112221 111 12222 2233444434 6899
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
||.+.+
T Consensus 79 vih~A~ 84 (349)
T TIGR02622 79 VFHLAA 84 (349)
T ss_pred EEECCc
Confidence 999887
No 385
>PRK08264 short chain dehydrogenase; Validated
Probab=94.82 E-value=0.18 Score=37.86 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=46.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCe-eeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDD-AFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
.+.+++|. |++|..+++.+...|+ +|+.++++.++.+. . ..++.. ..|..+.+++.+.+... +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-GPRVVPLQLDVTDPASVAAAAEAA--SDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-CCceEEEEecCCCHHHHHHHHHhc--CCCCEEEEC
Confidence 46788999 8999999998888999 99999988766442 1 111111 12333331222222221 258999988
Q ss_pred CCh
Q 043295 111 VGG 113 (223)
Q Consensus 111 ~g~ 113 (223)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 875
No 386
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.82 E-value=0.14 Score=44.98 Aligned_cols=77 Identities=21% Similarity=0.310 Sum_probs=49.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh----CCCe----eeecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL----GFDD----AFNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~i~~~~~--~ 102 (223)
.++++||+ |++|.+.++.....|++|+.++++.++.+.+.+++ +... ..|-.+.+++.+.+.+... +
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 36789999 89999999888888999999999887665543232 3211 1233333123333333221 3
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|+++.+.|
T Consensus 493 ~iDilV~nAG 502 (676)
T TIGR02632 493 GVDIVVNNAG 502 (676)
T ss_pred CCcEEEECCC
Confidence 6999999887
No 387
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=94.82 E-value=0.12 Score=38.53 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=60.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeec-------CCc--ccHHHHHHHhCC---
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNY-------KEE--TDLKATLKRYFP--- 101 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~--~~~~~~i~~~~~--- 101 (223)
.++.+|||- .|-|.-+.-+|.. |.+|++++-++.-.+.+.++.+....... ... +=+...+-+.+.
T Consensus 36 ~~~~rvLvPgCG~g~D~~~La~~-G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF~l~~~~~ 114 (218)
T PF05724_consen 36 KPGGRVLVPGCGKGYDMLWLAEQ-GHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFFELPPEDV 114 (218)
T ss_dssp STSEEEEETTTTTSCHHHHHHHT-TEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TTTGGGSCH
T ss_pred CCCCeEEEeCCCChHHHHHHHHC-CCeEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcccccCChhhc
Confidence 777899999 7888888888864 99999999999988877434443111100 000 000001111111
Q ss_pred CCccEEEcCCC---------hHHHHHHHHhhccCcEEEEEc
Q 043295 102 DGIDVYFDNVG---------GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 102 ~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g 133 (223)
|.||.|+|+.. ..+......+|+++|++.++.
T Consensus 115 g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~~lLi~ 155 (218)
T PF05724_consen 115 GKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGRGLLIT 155 (218)
T ss_dssp HSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEEEEEEE
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 26999999753 136778888999999944443
No 388
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.78 E-value=0.59 Score=37.91 Aligned_cols=93 Identities=16% Similarity=0.092 Sum_probs=57.8
Q ss_pred CEEEEE---CchHHHHHHHHHHc--CCeEEEEe--cCHHHHHHHHHhhCCCeeeecCCcccHHHHH--------------
Q 043295 38 EKVFVS---GAYGHLVGQYAKLG--GCYVVGSA--GTNEKVAILKEKLGFDDAFNYKEETDLKATL-------------- 96 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~--g~~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i-------------- 96 (223)
++|.|. |++|..++++.+.. ..+|++.+ ++.+++....++++..++.-.++ .....+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence 456677 77888888777655 45777775 33444444433777766543332 112222
Q ss_pred ----HHhCCC-CccEEEcCCCh-HHHHHHHHhhccCcEEEEE
Q 043295 97 ----KRYFPD-GIDVYFDNVGG-EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 97 ----~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 132 (223)
.+.... .+|+|+.+++| ..+...+..++.|-++.+.
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 222223 58999999987 5678888888888776654
No 389
>PRK14967 putative methyltransferase; Provisional
Probab=94.77 E-value=1.3 Score=33.21 Aligned_cols=92 Identities=20% Similarity=0.113 Sum_probs=59.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
.++++||-. .|.|..+..+++. |. +|++++.++...+.+++ ..+....+. .. ++.+.+ ..+.+|+|+.
T Consensus 35 ~~~~~vLDlGcG~G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~--~~-d~~~~~---~~~~fD~Vi~ 107 (223)
T PRK14967 35 GPGRRVLDLCTGSGALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR--RG-DWARAV---EFRPFDVVVS 107 (223)
T ss_pred CCCCeEEEecCCHHHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE--EC-chhhhc---cCCCeeEEEE
Confidence 678888888 6779998888875 55 99999999987776652 233321121 11 332221 2237999886
Q ss_pred CCC---------------------h-------HHHHHHHHhhccCcEEEEEc
Q 043295 110 NVG---------------------G-------EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 ~~g---------------------~-------~~~~~~~~~l~~~G~~v~~g 133 (223)
... . ..+..+.+.|+++|+++.+.
T Consensus 108 npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 108 NPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred CCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 421 0 12445778999999998764
No 390
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.77 E-value=0.091 Score=37.02 Aligned_cols=76 Identities=14% Similarity=0.251 Sum_probs=44.9
Q ss_pred CEEEEE---CchHHHHHHHHHHcCC-eEEEEecC--HHHHHHHHHh---hCCCe-e--eecCCcccHHHHHHHhC--CCC
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGC-YVVGSAGT--NEKVAILKEK---LGFDD-A--FNYKEETDLKATLKRYF--PDG 103 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~-~v~~~~~~--~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~~--~~~ 103 (223)
++++|+ +++|...++.....|. +|+.+.++ .++.+.+..+ .+... + .|..+.++....+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 468888 8999988877777766 78888888 4444434223 34311 1 23333323333333333 127
Q ss_pred ccEEEcCCCh
Q 043295 104 IDVYFDNVGG 113 (223)
Q Consensus 104 ~d~vid~~g~ 113 (223)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999988873
No 391
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.77 E-value=0.33 Score=36.62 Aligned_cols=77 Identities=17% Similarity=0.212 Sum_probs=48.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-ee--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-DA--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
+++++||+ |++|...++.....|++|+.++++.++.+.+.+.+ +.. .. .|..+.+.+.+.+..... +++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999 89999999888888999999998887655443222 221 11 233332122222322221 268
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99998886
No 392
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]
Probab=94.77 E-value=1 Score=32.05 Aligned_cols=120 Identities=15% Similarity=0.000 Sum_probs=84.9
Q ss_pred hhhccccchhhHHHHHHHHh-hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 15 FANGAGTSGFTAYVGFYEIS-QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~-~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
-.|-+|.+-.+|-.+...++ +.|..|+=. -+.|-..-.+.+..- ..++++..+.+-...+.+.+...++++.+..
T Consensus 26 VGaI~PsSs~lA~~M~s~I~pesglpVlElGPGTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda~- 104 (194)
T COG3963 26 VGAILPSSSILARKMASVIDPESGLPVLELGPGTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDAF- 104 (194)
T ss_pred eeeecCCcHHHHHHHHhccCcccCCeeEEEcCCccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccchh-
Confidence 34667777778877777777 888888888 456665555555432 3788999888877777755665667765544
Q ss_pred cHHHHHHHhCCCCccEEEcCCCh---------HHHHHHHHhhccCcEEEEEccc
Q 043295 91 DLKATLKRYFPDGIDVYFDNVGG---------EMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 91 ~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
++...+.+..+.-+|.|+.++.- ..++..+..+..||.++.+...
T Consensus 105 ~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftYg 158 (194)
T COG3963 105 DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTYG 158 (194)
T ss_pred hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEec
Confidence 44444555554589999988752 2577888899999999988754
No 393
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.76 E-value=0.17 Score=38.33 Aligned_cols=76 Identities=16% Similarity=0.207 Sum_probs=47.1
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhC--CCCcc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYF--PDGID 105 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d 105 (223)
++++||. |++|...+......|++|++++++.++.+.+.+.+ +... ..|..+.+++...+.... -+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3578888 89999888887788999999999887766554222 2211 124443312322222221 12589
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
++|.+.+
T Consensus 81 ~vi~~a~ 87 (255)
T TIGR01963 81 ILVNNAG 87 (255)
T ss_pred EEEECCC
Confidence 8887775
No 394
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.74 E-value=0.27 Score=38.21 Aligned_cols=89 Identities=13% Similarity=0.005 Sum_probs=58.4
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCe----eeecCCcccHHHHHHHhCCC-CccE
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDD----AFNYKEETDLKATLKRYFPD-GIDV 106 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~~~~-~~d~ 106 (223)
.++++++|. ||.+.+++.-++..|+ +++.+-|+.++.+.+.+.++... .....+. ... .+|+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~----------~~~~~~dl 193 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL----------EGLEEADL 193 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc----------ccccccCE
Confidence 347899999 9999999999999997 89999999998777764554311 1111111 001 3899
Q ss_pred EEcCCChH--H-----HHHHHHhhccCcEEEEEcc
Q 043295 107 YFDNVGGE--M-----LEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 107 vid~~g~~--~-----~~~~~~~l~~~G~~v~~g~ 134 (223)
+++|+.-. . .-. ..++++.-.+..+-.
T Consensus 194 iINaTp~Gm~~~~~~~~~~-~~~l~~~~~v~D~vY 227 (283)
T COG0169 194 LINATPVGMAGPEGDSPVP-AELLPKGAIVYDVVY 227 (283)
T ss_pred EEECCCCCCCCCCCCCCCc-HHhcCcCCEEEEecc
Confidence 99988631 1 111 456666666666543
No 395
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.74 E-value=0.26 Score=38.53 Aligned_cols=55 Identities=24% Similarity=0.248 Sum_probs=37.3
Q ss_pred hhHHHHHHHHh------hCCCEEEEE--CchHHHHHHHHHHcCCe-EEEEecCH---HHHHHHHHhh
Q 043295 24 FTAYVGFYEIS------QKGEKVFVS--GAYGHLVGQYAKLGGCY-VVGSAGTN---EKVAILKEKL 78 (223)
Q Consensus 24 ~ta~~~l~~~~------~~g~~vlI~--g~vG~~a~qla~~~g~~-v~~~~~~~---~~~~~~~~~~ 78 (223)
-|-+.++.+.- .++++++|. |+.|.+++..+...|++ |+.+.++. ++.+.+.+++
T Consensus 107 NTD~~G~~~~l~~~~~~~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 107 ITDGLGFVRNLREHGVDVKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred ecCHHHHHHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 44555544432 347789999 89999888888888995 99999885 4444433244
No 396
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.21 Score=38.36 Aligned_cols=74 Identities=20% Similarity=0.223 Sum_probs=45.5
Q ss_pred EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHhCC--CCccEE
Q 043295 39 KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 39 ~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
+++|. |++|...++.....|++|+.++++.++.+.+.+.+ +... + .|..+..++.+.+..... +++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67888 89999988888888999999998887655443222 2221 1 233222122222222211 369999
Q ss_pred EcCCC
Q 043295 108 FDNVG 112 (223)
Q Consensus 108 id~~g 112 (223)
|.+.|
T Consensus 82 I~~ag 86 (270)
T PRK05650 82 VNNAG 86 (270)
T ss_pred EECCC
Confidence 99887
No 397
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.71 E-value=0.26 Score=37.70 Aligned_cols=77 Identities=21% Similarity=0.276 Sum_probs=46.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEec-CHHHHHHHHHh----hCCC-ee--eecCCcccHHHHHHHhCC--C
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAG-TNEKVAILKEK----LGFD-DA--FNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~-~~~~~~~~~~~----~g~~-~~--~~~~~~~~~~~~i~~~~~--~ 102 (223)
++++++|. +++|.+.++.....|++|+.+.+ ++++.+.+.++ .+.. .. .|-.+.++..+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 57899999 89999999888889999988764 34443332212 2321 11 233333123333332222 3
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
.+|+++.+.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899998875
No 398
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.70 E-value=0.27 Score=37.57 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=46.3
Q ss_pred CCCEEEEE--C---chHHHHHHHHHHcCCeEEEEecCH---HHHHHHHHhhCCCe----eeecCCcccHHHHHHHhCC--
Q 043295 36 KGEKVFVS--G---AYGHLVGQYAKLGGCYVVGSAGTN---EKVAILKEKLGFDD----AFNYKEETDLKATLKRYFP-- 101 (223)
Q Consensus 36 ~g~~vlI~--g---~vG~~a~qla~~~g~~v~~~~~~~---~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~~~-- 101 (223)
.+++++|+ + ++|.++++.....|++|+.++++. ++.+.+.+++.... ..|-.+.++....+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 46788999 3 799998888888999999887543 34444443442111 1344333233333333322
Q ss_pred CCccEEEcCCC
Q 043295 102 DGIDVYFDNVG 112 (223)
Q Consensus 102 ~~~d~vid~~g 112 (223)
+++|+++++.|
T Consensus 86 g~ld~lv~nag 96 (257)
T PRK08594 86 GVIHGVAHCIA 96 (257)
T ss_pred CCccEEEECcc
Confidence 36999988775
No 399
>PRK14968 putative methyltransferase; Provisional
Probab=94.67 E-value=0.25 Score=35.56 Aligned_cols=40 Identities=30% Similarity=0.231 Sum_probs=34.2
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHH
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILK 75 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~ 75 (223)
.+++++|-. ++.|..+..+++. +.++++++.+++..+.++
T Consensus 22 ~~~~~vLd~G~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~ 62 (188)
T PRK14968 22 KKGDRVLEVGTGSGIVAIVAAKN-GKKVVGVDINPYAVECAK 62 (188)
T ss_pred cCCCEEEEEccccCHHHHHHHhh-cceEEEEECCHHHHHHHH
Confidence 677888888 8889999998887 899999999988777665
No 400
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.45 Score=35.86 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=31.5
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHH
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILK 75 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~ 75 (223)
.+++|. |++|...+......|++|+.+++++++.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 42 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH 42 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 467888 89998888777778999999999988877665
No 401
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.67 E-value=0.29 Score=38.76 Aligned_cols=85 Identities=13% Similarity=0.055 Sum_probs=53.5
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
.|++|.|. |.+|...++.++..|.+|++..++.++.+ +..... ... ++.+.+.+ .|+|+.+...
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~~-----aDvvv~~lPl 200 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLSQ-----TRVLINLLPN 200 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHhc-----CCEEEECCCC
Confidence 46789999 99999999999999999999886543311 111111 111 33333322 6777776653
Q ss_pred -HH-----HHHHHHhhccCcEEEEEcc
Q 043295 114 -EM-----LEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 114 -~~-----~~~~~~~l~~~G~~v~~g~ 134 (223)
+. -...+..|++++.+|.+|-
T Consensus 201 t~~T~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 201 TPETVGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred CHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence 21 1345667777777777663
No 402
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=94.65 E-value=0.88 Score=38.17 Aligned_cols=98 Identities=19% Similarity=0.228 Sum_probs=63.6
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
++|++||=. .+-|.-..++|..++ ..|++.+.++.+...+++ .+|...+...+. +. ..+....++.||.|+
T Consensus 112 ~pg~~VLD~CAAPGgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~--D~-~~~~~~~~~~fD~IL 188 (470)
T PRK11933 112 NAPQRVLDMAAAPGSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHF--DG-RVFGAALPETFDAIL 188 (470)
T ss_pred CCCCEEEEeCCCccHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC--ch-hhhhhhchhhcCeEE
Confidence 789988877 777888888888874 389999999998766642 568765432221 11 112222233588775
Q ss_pred -c--CCCh--------------------------HHHHHHHHhhccCcEEEEEccc
Q 043295 109 -D--NVGG--------------------------EMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 109 -d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
| |+|. ..+..++..|++||++|....+
T Consensus 189 vDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYSTCT 244 (470)
T PRK11933 189 LDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYSTCT 244 (470)
T ss_pred EcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECCC
Confidence 5 5542 1234567899999999876543
No 403
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.64 E-value=0.37 Score=37.52 Aligned_cols=75 Identities=16% Similarity=0.129 Sum_probs=52.5
Q ss_pred hCCCEEEEE--Cc-hHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 35 QKGEKVFVS--GA-YGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~--g~-vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
-.|++++|. |+ +|...+.++...|++|+...+.. . ++.+.+ ..+|+++.++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~-----~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELV-----KQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHh-----ccCCEEEEcc
Confidence 678999999 76 99999999999999777655311 1 111111 1389999999
Q ss_pred ChHHHHHHHHhhccCcEEEEEcccc
Q 043295 112 GGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 112 g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
|.+.+ -..+.++++..++.+|...
T Consensus 211 G~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 211 GKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred CCCCc-CCHHHcCCCCEEEEEEEee
Confidence 86432 2235689999999988654
No 404
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.64 E-value=0.23 Score=39.37 Aligned_cols=91 Identities=15% Similarity=0.111 Sum_probs=56.4
Q ss_pred hCCCEEEEE--CchHHHHHHHHH-HcCC-eEEEEecCHHHHHHHHHhhCCC--eeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAK-LGGC-YVVGSAGTNEKVAILKEKLGFD--DAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~-~~g~-~v~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
....+++|. |..|...+.... ..+. +|+...+++++.+.+.+++... .+.... +..+.++ +.|+|+
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~---~~~~av~-----~aDIVi 194 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVT---DLEAAVR-----QADIIS 194 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeC---CHHHHHh-----cCCEEE
Confidence 566788888 888888875433 3554 8999999988876665454221 111111 3333332 389999
Q ss_pred cCCChH--HHHHHHHhhccCcEEEEEccc
Q 043295 109 DNVGGE--MLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 109 d~~g~~--~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.|+++. .+. .+.++++-.+..+|..
T Consensus 195 ~aT~s~~pvl~--~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 195 CATLSTEPLVR--GEWLKPGTHLDLVGNF 221 (314)
T ss_pred EeeCCCCCEec--HHHcCCCCEEEeeCCC
Confidence 888764 122 2467887766666643
No 405
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.63 E-value=1.5 Score=33.40 Aligned_cols=92 Identities=16% Similarity=0.135 Sum_probs=60.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC-CeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF-DDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
.++.+||-. .|.|..+..+++ .|.+|++++.+++.++.++ +... ...+.. +.. .+ ...++.+|+|+....
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~-~~~~~~~~~~~----d~~-~~-~~~~~~fD~V~s~~~ 112 (251)
T PRK10258 41 RKFTHVLDAGCGPGWMSRYWRE-RGSQVTALDLSPPMLAQAR-QKDAADHYLAG----DIE-SL-PLATATFDLAWSNLA 112 (251)
T ss_pred cCCCeEEEeeCCCCHHHHHHHH-cCCeEEEEECCHHHHHHHH-hhCCCCCEEEc----Ccc-cC-cCCCCcEEEEEECch
Confidence 456788777 677877766665 5889999999999888888 4332 222211 111 11 111226999986442
Q ss_pred -----h--HHHHHHHHhhccCcEEEEEcc
Q 043295 113 -----G--EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 113 -----~--~~~~~~~~~l~~~G~~v~~g~ 134 (223)
. ..+..+.+.|+++|.++....
T Consensus 113 l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 113 VQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred hhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1 357788899999999987654
No 406
>TIGR00308 TRM1 tRNA(guanine-26,N2-N2) methyltransferase. This enzyme is responsible for two methylations of a characteristic guanine of most tRNA molecules. The activity has been demonstrated for eukaryotic and archaeal proteins, which are active when expressed in E. coli, a species that lacks this enzyme. At least one Eubacterium, Aquifex aeolicus, has an ortholog, as do all completed archaeal genomes.
Probab=94.62 E-value=1.1 Score=36.36 Aligned_cols=92 Identities=17% Similarity=0.151 Sum_probs=63.0
Q ss_pred EEEEE-CchHHHHHHHHHHc-CC-eEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEE-EcCC
Q 043295 39 KVFVS-GAYGHLVGQYAKLG-GC-YVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVY-FDNV 111 (223)
Q Consensus 39 ~vlI~-g~vG~~a~qla~~~-g~-~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~v-id~~ 111 (223)
+||=. +++|..++.+++.. |+ +|++.+.+++..+.+++. .+...+.-... +....+... ++.+|+| +|.-
T Consensus 47 ~vLD~faGsG~rgir~a~e~~ga~~Vv~nD~n~~Av~~i~~N~~~N~~~~~~v~~~--Da~~~l~~~-~~~fDvIdlDPf 123 (374)
T TIGR00308 47 NIADALSASGIRAIRYAHEIEGVREVFANDINPKAVESIKNNVEYNSVENIEVPNE--DAANVLRYR-NRKFHVIDIDPF 123 (374)
T ss_pred EEEECCCchhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEch--hHHHHHHHh-CCCCCEEEeCCC
Confidence 55555 99999999999985 76 899999999988777642 23332211221 233333332 2369988 8998
Q ss_pred Ch--HHHHHHHHhhccCcEEEEEc
Q 043295 112 GG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 112 g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
|. +.++.++..++++|.+....
T Consensus 124 Gs~~~fld~al~~~~~~glL~vTa 147 (374)
T TIGR00308 124 GTPAPFVDSAIQASAERGLLLVTA 147 (374)
T ss_pred CCcHHHHHHHHHhcccCCEEEEEe
Confidence 86 57888999999888776553
No 407
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.59 E-value=0.2 Score=39.68 Aligned_cols=91 Identities=19% Similarity=0.202 Sum_probs=56.5
Q ss_pred EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeee-ecCCcccHHHHHHHhCCCCccEEEcCCChH
Q 043295 39 KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAF-NYKEETDLKATLKRYFPDGIDVYFDNVGGE 114 (223)
Q Consensus 39 ~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 114 (223)
+|+|+ |.+|..+++.+...|.+|++.+++.++...+. ..+++.+. |..+. +.+..... ++|+||++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~----~~l~~al~-g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLP----ETLPPSFK-GVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCH----HHHHHHHC-CCCEEEECCCCC
Confidence 68888 88999888888888999999999877655555 45553331 33332 12222222 589999987531
Q ss_pred -----H--------HHHHHHhhccC--cEEEEEccc
Q 043295 115 -----M--------LEAAVANMNLF--GRVAACGVI 135 (223)
Q Consensus 115 -----~--------~~~~~~~l~~~--G~~v~~g~~ 135 (223)
. ....++.++.. .+++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0 12233444433 378887764
No 408
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.57 E-value=0.24 Score=39.00 Aligned_cols=92 Identities=11% Similarity=-0.037 Sum_probs=60.3
Q ss_pred hCCCEEEEE--CchHHHHHHHHHH-cCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKL-GGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~-~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
....+++|. |..|.+.++.... .+. +|....+++++.+.+.++++... +..... +..+.+. +.|+|+.|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~-~~~~av~-----~aDiVita 195 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPL-DGEAIPE-----AVDLVVTA 195 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEEC-CHHHHhh-----cCCEEEEc
Confidence 556788888 8888888877654 565 78899999887766554553211 000011 3444443 49999999
Q ss_pred CChH--HHHHHHHhhccCcEEEEEcccc
Q 043295 111 VGGE--MLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 111 ~g~~--~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
+.+. .+. .+ +++|-.+..+|...
T Consensus 196 T~s~~Pl~~-~~--~~~g~hi~~iGs~~ 220 (304)
T PRK07340 196 TTSRTPVYP-EA--ARAGRLVVAVGAFT 220 (304)
T ss_pred cCCCCceeC-cc--CCCCCEEEecCCCC
Confidence 9863 343 33 68888888888654
No 409
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=94.56 E-value=0.52 Score=39.28 Aligned_cols=96 Identities=22% Similarity=0.290 Sum_probs=61.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHc--CCeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLG--GCYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~--g~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
+++++||=. ++.|..+..+++.. +.+|++++.++++.+.+++ .+|.+.+ ..... +..+..... .+.+|.|+
T Consensus 249 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~~-D~~~~~~~~-~~~fD~Vl 325 (444)
T PRK14902 249 KGGDTVLDACAAPGGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKAL-DARKVHEKF-AEKFDKIL 325 (444)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEeC-Ccccccchh-cccCCEEE
Confidence 677887777 78898888998876 4599999999988777653 3455432 11111 111111111 13589885
Q ss_pred -c--CCCh--------------------------HHHHHHHHhhccCcEEEEEc
Q 043295 109 -D--NVGG--------------------------EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 109 -d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g 133 (223)
| |+|. ..+..++++|++||+++...
T Consensus 326 ~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvyst 379 (444)
T PRK14902 326 VDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYST 379 (444)
T ss_pred EcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEc
Confidence 3 3331 13566788999999998654
No 410
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.56 E-value=0.23 Score=37.25 Aligned_cols=75 Identities=24% Similarity=0.324 Sum_probs=43.8
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEec-CHHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CCcc
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAG-TNEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~-~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
+++||+ |++|...++.....|++|+++.+ ++.+.+...+++ +.. ...|..+...+.+.+..... +.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 367888 89999999888888999999887 444433222122 211 11233332122232222211 3689
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
++|.+.|
T Consensus 81 ~vi~~ag 87 (242)
T TIGR01829 81 VLVNNAG 87 (242)
T ss_pred EEEECCC
Confidence 9999887
No 411
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.55 E-value=0.62 Score=35.19 Aligned_cols=77 Identities=18% Similarity=0.239 Sum_probs=46.3
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEec-CHHHHHHHHHhhCCCe-e--eecCCcccHHHHHH---HhCCCCcc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAG-TNEKVAILKEKLGFDD-A--FNYKEETDLKATLK---RYFPDGID 105 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~-~~~~~~~~~~~~g~~~-~--~~~~~~~~~~~~i~---~~~~~~~d 105 (223)
.+++++|+ |++|...+......|++|+.+.+ +.++.+.+.++++... . .|..+.+++.+.+. +..++++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 35688999 89999999888888999987654 4455444443444211 1 23333212333332 23332499
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9998765
No 412
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.54 E-value=0.27 Score=38.75 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=28.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGT 67 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~ 67 (223)
.+++++|+ +++|.+.++.....|++|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 46789999 789999999888899999999876
No 413
>PRK12743 oxidoreductase; Provisional
Probab=94.52 E-value=0.25 Score=37.63 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=45.0
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEec-CHHHHHHHHH---hhCCC-ee--eecCCcccHHHHHHHhCC--CCc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAG-TNEKVAILKE---KLGFD-DA--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~-~~~~~~~~~~---~~g~~-~~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
+++++|+ +++|..+++.+...|++|+.+.+ +.++.+.+.+ ..|.. .. .|..+..+....+.+... +++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999 79999999999899999988764 3333333221 23432 11 233332122222222211 268
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|+++.+.|
T Consensus 82 d~li~~ag 89 (256)
T PRK12743 82 DVLVNNAG 89 (256)
T ss_pred CEEEECCC
Confidence 99998886
No 414
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.52 E-value=0.21 Score=38.22 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=58.4
Q ss_pred CCCEEEEE--C---chHHHHHHHHHHcCCeEEEEecCH------HHHHHHHHhhCCCee--eecCCcccHHHHHHHhCC-
Q 043295 36 KGEKVFVS--G---AYGHLVGQYAKLGGCYVVGSAGTN------EKVAILKEKLGFDDA--FNYKEETDLKATLKRYFP- 101 (223)
Q Consensus 36 ~g~~vlI~--g---~vG~~a~qla~~~g~~v~~~~~~~------~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~- 101 (223)
.+++++|. + ++|.+.++.....|++|+.+.++. +..+.+.++.+.... .|-.+.++..+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46788888 2 799999988888999998875432 223333312221111 344443223323332222
Q ss_pred -CCccEEEcCCChH-------H--------H---------------HHHHHhhccCcEEEEEccccc
Q 043295 102 -DGIDVYFDNVGGE-------M--------L---------------EAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 102 -~~~d~vid~~g~~-------~--------~---------------~~~~~~l~~~G~~v~~g~~~~ 137 (223)
+++|+++++.|.. . + +..+..+..+|+++.++...+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 3699999888721 0 1 224456667799988876543
No 415
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.52 E-value=0.62 Score=37.10 Aligned_cols=88 Identities=23% Similarity=0.181 Sum_probs=61.8
Q ss_pred CEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-----e------eeecCCcccHHHHHHHhCCCCc
Q 043295 38 EKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-----D------AFNYKEETDLKATLKRYFPDGI 104 (223)
Q Consensus 38 ~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~------~~~~~~~~~~~~~i~~~~~~~~ 104 (223)
.+|.|. |.+|.+.+......|.+|+...+++++.+.+. ..+.. . +... . +..+.+ +..
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~-~~~~~~~~~~g~~~~~~~~~~--~-~~~e~~-----~~a 75 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALA-AERENREYLPGVALPAELYPT--A-DPEEAL-----AGA 75 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HhCcccccCCCCcCCCCeEEe--C-CHHHHH-----cCC
Confidence 467788 99999999888888999999999888877776 43210 0 1111 1 233322 248
Q ss_pred cEEEcCCChHHHHHHHHhhccCcEEEEEcc
Q 043295 105 DVYFDNVGGEMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 105 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~ 134 (223)
|+|+-|+....+...+..++++-.++.+..
T Consensus 76 D~Vi~~v~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 76 DFAVVAVPSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred CEEEEECchHHHHHHHHhcCcCCEEEEEee
Confidence 999999998777778788888777776654
No 416
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.51 E-value=0.64 Score=37.92 Aligned_cols=89 Identities=21% Similarity=0.190 Sum_probs=55.5
Q ss_pred EEEE--CchHHHHHHHHHHcC-C-eEEEEecCHHHHHHHHHhh-CC---CeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 40 VFVS--GAYGHLVGQYAKLGG-C-YVVGSAGTNEKVAILKEKL-GF---DDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 40 vlI~--g~vG~~a~qla~~~g-~-~v~~~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
|+|. |.+|..+++.+...+ . +|+..+++.++.+.+.+++ +. ...+|-.+. +.+.+... +.|+|++|+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~-~~dvVin~~ 75 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP----ESLAELLR-GCDVVINCA 75 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH----HHHHHHHT-TSSEEEE-S
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH----HHHHHHHh-cCCEEEECC
Confidence 5677 889999998877765 4 8999999999987776332 22 122343332 22444433 369999999
Q ss_pred ChH-HHHHHHHhhccCcEEEEEc
Q 043295 112 GGE-MLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 112 g~~-~~~~~~~~l~~~G~~v~~g 133 (223)
|.. ....+-.|+..+-.++..+
T Consensus 76 gp~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 76 GPFFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp SGGGHHHHHHHHHHHT-EEEESS
T ss_pred ccchhHHHHHHHHHhCCCeeccc
Confidence 974 4444555667777888743
No 417
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.47 E-value=0.63 Score=36.30 Aligned_cols=44 Identities=16% Similarity=0.132 Sum_probs=35.3
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhh
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKL 78 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~ 78 (223)
..+++++|. ||.|++++.-+...|+ +++...|+.++.+.+.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 446789999 9999999988888998 7888889888877665444
No 418
>PLN00203 glutamyl-tRNA reductase
Probab=94.47 E-value=0.49 Score=40.16 Aligned_cols=95 Identities=25% Similarity=0.338 Sum_probs=59.7
Q ss_pred CCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCCh
Q 043295 37 GEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 37 g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 113 (223)
+.+|+|. |.+|.++++.+...|+ +|+++.++.++.+.+.++++...+ .....++..+.+. ..|+||.|++.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~-----~aDVVIsAT~s 339 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAA-----EADVVFTSTSS 339 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHh-----cCCEEEEccCC
Confidence 6789999 9999999998888897 799999998887777645642111 1111002222221 48999999876
Q ss_pred H--H-HHHHHHhhcc----Cc---EEEEEccccc
Q 043295 114 E--M-LEAAVANMNL----FG---RVAACGVISE 137 (223)
Q Consensus 114 ~--~-~~~~~~~l~~----~G---~~v~~g~~~~ 137 (223)
. . ....+..+.+ .| .++.++.|.+
T Consensus 340 ~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRd 373 (519)
T PLN00203 340 ETPLFLKEHVEALPPASDTVGGKRLFVDISVPRN 373 (519)
T ss_pred CCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCC
Confidence 3 1 2333333321 12 4778877654
No 419
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=94.46 E-value=0.75 Score=38.26 Aligned_cols=97 Identities=22% Similarity=0.241 Sum_probs=62.6
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHH---hhCCCeeeecCCcccHHHHHHH---hCCCCcc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKE---KLGFDDAFNYKEETDLKATLKR---YFPDGID 105 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~---~~~~~~d 105 (223)
++|++||=. .+.|..+..+++..+ .+|++++.++++++.+++ .+|.+.+.-... +.. .+.. ...+.||
T Consensus 251 ~~g~~VLDl~ag~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~--D~~-~~~~~~~~~~~~fD 327 (434)
T PRK14901 251 QPGEVILDACAAPGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAA--DSR-NLLELKPQWRGYFD 327 (434)
T ss_pred CCcCEEEEeCCCCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeC--Chh-hcccccccccccCC
Confidence 778887777 788888888888764 489999999998876653 356644321111 111 1111 1123689
Q ss_pred EEE-c--CCCh--------------------------HHHHHHHHhhccCcEEEEEcc
Q 043295 106 VYF-D--NVGG--------------------------EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 106 ~vi-d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~ 134 (223)
.|+ | |+|. ..+..+++.|++||++|....
T Consensus 328 ~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvystc 385 (434)
T PRK14901 328 RILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYATC 385 (434)
T ss_pred EEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 886 4 4541 225677889999999987653
No 420
>PRK09135 pteridine reductase; Provisional
Probab=94.44 E-value=0.28 Score=36.96 Aligned_cols=77 Identities=10% Similarity=0.102 Sum_probs=45.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH-HHHHHHHHhh---CCC----eeeecCCcccHHHHHHHhC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN-EKVAILKEKL---GFD----DAFNYKEETDLKATLKRYF--PD 102 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~-~~~~~~~~~~---g~~----~~~~~~~~~~~~~~i~~~~--~~ 102 (223)
.++++||+ |++|..+++.....|++|+.++++. ++.+.+.+.+ +.. ...|..+.+.....+.... -+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999 8999998888888899999999753 3333322121 111 1123333312222222221 12
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|++|.+.|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 5899999887
No 421
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.43 E-value=1 Score=36.90 Aligned_cols=95 Identities=23% Similarity=0.268 Sum_probs=63.6
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
-.+.++||. |-+|..++......|. +|+..-|+.++...+.+++|+. +...+ ++.+.+. .+|+||-++
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~-----~~DvVissT 246 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALA-----EADVVISST 246 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhh-----hCCEEEEec
Confidence 378899999 7799999998888997 7777778888877666589853 32222 2233332 399999999
Q ss_pred ChHH----HHHHHHhhccC-c-EEEEEcccccc
Q 043295 112 GGEM----LEAAVANMNLF-G-RVAACGVISEC 138 (223)
Q Consensus 112 g~~~----~~~~~~~l~~~-G-~~v~~g~~~~~ 138 (223)
+++. -....+.++.. . .++.++.|.+-
T Consensus 247 sa~~~ii~~~~ve~a~~~r~~~livDiavPRdi 279 (414)
T COG0373 247 SAPHPIITREMVERALKIRKRLLIVDIAVPRDV 279 (414)
T ss_pred CCCccccCHHHHHHHHhcccCeEEEEecCCCCC
Confidence 8742 23344455433 2 46777776553
No 422
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.43 E-value=0.49 Score=37.06 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=63.0
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEe-cCHHHHHHHHHhhCCCeeeecCCccc
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSA-GTNEKVAILKEKLGFDDAFNYKEETD 91 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 91 (223)
-+|++....+..|..+. -.|++|.|+ +.+|.-.+.+....|++|++.. ++. +
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~----------------------~ 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR----------------------D 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC----------------------C
Confidence 35666666666666665 689999999 7899888888888899998874 332 1
Q ss_pred HHHHHHHhCCCCccEEEcCCChHH-HHHHHHhhccCcEEEEEcccc
Q 043295 92 LKATLKRYFPDGIDVYFDNVGGEM-LEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 92 ~~~~i~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 136 (223)
+.+.++ ..|+|+-++|.+. +... .+++|..++.+|...
T Consensus 195 l~e~~~-----~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 195 LPAVCR-----RADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred HHHHHh-----cCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 111121 2789999999753 3333 388999999998643
No 423
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=94.42 E-value=0.38 Score=36.16 Aligned_cols=94 Identities=20% Similarity=0.262 Sum_probs=59.2
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCCCCccEEEc-
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFPDGIDVYFD- 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid- 109 (223)
.++.+||-. .+.|..+..+++. ++++++++.++...+.+++.+ +.. ++.... +..+. ....++.+|+|+-
T Consensus 47 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~--~~~~~~-~~~~~-~~~~~~~fD~Ii~~ 121 (233)
T PRK05134 47 LFGKRVLDVGCGGGILSESMARL-GADVTGIDASEENIEVARLHALESGLK--IDYRQT-TAEEL-AAEHPGQFDVVTCM 121 (233)
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEcCCHHHHHHHHHHHHHcCCc--eEEEec-CHHHh-hhhcCCCccEEEEh
Confidence 456777777 6678888888774 789999998888777666322 221 122221 22222 1122347999853
Q ss_pred ----CCCh--HHHHHHHHhhccCcEEEEEc
Q 043295 110 ----NVGG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 ----~~g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
+... ..+..+.+.|+++|.++...
T Consensus 122 ~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~ 151 (233)
T PRK05134 122 EMLEHVPDPASFVRACAKLVKPGGLVFFST 151 (233)
T ss_pred hHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence 3333 35678888999999988653
No 424
>PLN02928 oxidoreductase family protein
Probab=94.41 E-value=0.28 Score=39.40 Aligned_cols=91 Identities=15% Similarity=0.098 Sum_probs=56.3
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC-----Ceeee--cCCcccHHHHHHHhCCCCccE
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF-----DDAFN--YKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~~~~--~~~~~~~~~~i~~~~~~~~d~ 106 (223)
.|+++.|. |.+|..+++.++.+|.+|++..++..+.. .. .++. ....+ .... ++.+.+.+ .|+
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~L~ell~~-----aDi 229 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEP-ED-GLLIPNGDVDDLVDEKGGHE-DIYEFAGE-----ADI 229 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhh-hh-hhccccccccccccccCccc-CHHHHHhh-----CCE
Confidence 46789999 99999999999999999999987633211 11 1110 00000 0111 34444433 788
Q ss_pred EEcCCCh-H-H----HHHHHHhhccCcEEEEEcc
Q 043295 107 YFDNVGG-E-M----LEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 107 vid~~g~-~-~----~~~~~~~l~~~G~~v~~g~ 134 (223)
|+-+... + + -...+..|+++..+|.++-
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 8877652 2 1 2356778888888887763
No 425
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=94.41 E-value=0.24 Score=38.66 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=57.3
Q ss_pred CCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 36 KGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 36 ~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
++.+||-. +|.|..+..+++. |.+|++++.++...+.+++. .+...-+... +..+. . ..+.+|+|+.+.
T Consensus 120 ~~~~vLDlGcG~G~~~~~la~~-g~~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~---D~~~~--~-~~~~fD~I~~~~ 192 (287)
T PRK12335 120 KPGKALDLGCGQGRNSLYLALL-GFDVTAVDINQQSLENLQEIAEKENLNIRTGLY---DINSA--S-IQEEYDFILSTV 192 (287)
T ss_pred CCCCEEEeCCCCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCceEEEEe---chhcc--c-ccCCccEEEEcc
Confidence 34577777 8899988888874 88999999999877766522 2321111111 11110 0 133699998653
Q ss_pred -----Ch----HHHHHHHHhhccCcEEEEEc
Q 043295 112 -----GG----EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 112 -----g~----~~~~~~~~~l~~~G~~v~~g 133 (223)
.. ..+..+.+.|++||.++.+.
T Consensus 193 vl~~l~~~~~~~~l~~~~~~LkpgG~~l~v~ 223 (287)
T PRK12335 193 VLMFLNRERIPAIIKNMQEHTNPGGYNLIVC 223 (287)
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 21 24667788999999966543
No 426
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.21 Score=38.06 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=44.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-eeeecCCcccHH---HHHHHhCCCCccEEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DAFNYKEETDLK---ATLKRYFPDGIDVYF 108 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~i~~~~~~~~d~vi 108 (223)
+++++||. |++|...++.....|++|+.++++..+. . .-... ...|-.+.+... +.+.+.. +++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--L--PEGVEFVAADLTTAEGCAAVARAVLERL-GGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--c--CCceeEEecCCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence 57889999 8999999988888899999999875431 1 11111 112333331222 2222222 3689999
Q ss_pred cCCC
Q 043295 109 DNVG 112 (223)
Q Consensus 109 d~~g 112 (223)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 427
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.35 E-value=0.19 Score=37.93 Aligned_cols=78 Identities=27% Similarity=0.347 Sum_probs=45.1
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEec-CHHHH-HHHHH--hhCCCee---eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAG-TNEKV-AILKE--KLGFDDA---FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~-~~~~~-~~~~~--~~g~~~~---~~~~~~~~~~~~i~~~~~--~~ 103 (223)
+++.++|+ |++|...++.....|++|+...+ +..+. +.+.+ ..+.... .|..+.++..+.+.+... ++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46788999 89999999888889999887653 22222 22220 2343222 233332122222322221 36
Q ss_pred ccEEEcCCCh
Q 043295 104 IDVYFDNVGG 113 (223)
Q Consensus 104 ~d~vid~~g~ 113 (223)
+|+++.+.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 428
>PRK07069 short chain dehydrogenase; Validated
Probab=94.34 E-value=0.27 Score=37.13 Aligned_cols=73 Identities=16% Similarity=0.265 Sum_probs=44.7
Q ss_pred EEEE---CchHHHHHHHHHHcCCeEEEEecC-HHHHHHHHHhhC----CCe----eeecCCcccHHHHHHHhCC--CCcc
Q 043295 40 VFVS---GAYGHLVGQYAKLGGCYVVGSAGT-NEKVAILKEKLG----FDD----AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 40 vlI~---g~vG~~a~qla~~~g~~v~~~~~~-~~~~~~~~~~~g----~~~----~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++|. |++|...++.....|++|+.++++ .++.+.+.+++. ... ..|..+.+.+...+.+... +++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 6777 889999888888889999999987 555544432321 111 1243333233333333222 3689
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 82 ~vi~~ag 88 (251)
T PRK07069 82 VLVNNAG 88 (251)
T ss_pred EEEECCC
Confidence 9999887
No 429
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.33 E-value=1.1 Score=30.50 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=49.1
Q ss_pred CchHHHHHHHHHHcC--CeEEEEec--CHHHH-HHHHHhhCCCeeeecCCc--ccHHH----------------HHHHhC
Q 043295 44 GAYGHLVGQYAKLGG--CYVVGSAG--TNEKV-AILKEKLGFDDAFNYKEE--TDLKA----------------TLKRYF 100 (223)
Q Consensus 44 g~vG~~a~qla~~~g--~~v~~~~~--~~~~~-~~~~~~~g~~~~~~~~~~--~~~~~----------------~i~~~~ 100 (223)
|.+|..+.++.+... .+|++.+- +-+++ +.++ +|.+..+.-.++. ..+.+ .+.+..
T Consensus 8 GSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~~l~~~~ 86 (129)
T PF02670_consen 8 GSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPEGLEELA 86 (129)
T ss_dssp SHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChHHHHHHh
Confidence 788888888888876 47776653 33333 3334 6777666544432 01111 122222
Q ss_pred C-CCccEEEcCCCh-HHHHHHHHhhccCcEEEE
Q 043295 101 P-DGIDVYFDNVGG-EMLEAAVANMNLFGRVAA 131 (223)
Q Consensus 101 ~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~ 131 (223)
. ..+|+++.++.| .-+...+..+..+-++.+
T Consensus 87 ~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 87 EEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp THTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred cCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 2 268888887765 667888888887766654
No 430
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.33 E-value=0.6 Score=35.01 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=61.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
+++++||=. .|.|..+..+++..+ .+|++++.++...+.+++.+ +.+.+- .-.. +.. .+ ....+.+|+|+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~-~~~~-d~~-~~-~~~~~~fD~V~ 119 (231)
T TIGR02752 44 QAGTSALDVCCGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVE-LVHG-NAM-EL-PFDDNSFDYVT 119 (231)
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceE-EEEe-chh-cC-CCCCCCccEEE
Confidence 678888888 888999999998764 59999999988877776332 222221 1000 111 11 11223789887
Q ss_pred cCCC-----h--HHHHHHHHhhccCcEEEEEcc
Q 043295 109 DNVG-----G--EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 109 d~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 134 (223)
-+.. . ..+..+.+.|++||.++....
T Consensus 120 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 120 IGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred EecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 4321 1 246778899999999987653
No 431
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.32 E-value=0.29 Score=38.95 Aligned_cols=90 Identities=20% Similarity=0.168 Sum_probs=56.9
Q ss_pred hCCCEEEEE--CchHHHHHHHHH-HcCC-eEEEEecCHHHHHHHHHhh----CCCeeeecCCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAK-LGGC-YVVGSAGTNEKVAILKEKL----GFDDAFNYKEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~~~~d~ 106 (223)
+...+++|. |+.|...+.... ..+. +|....++.++.+.+.+++ |.. +.... +..+.++ ..|+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~-----~aDi 197 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMS-----GADI 197 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhc-----cCCE
Confidence 445688888 888877776655 4675 7888899988766554344 332 21111 3433332 4999
Q ss_pred EEcCCChH--HHHHHHHhhccCcEEEEEccc
Q 043295 107 YFDNVGGE--MLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 107 vid~~g~~--~~~~~~~~l~~~G~~v~~g~~ 135 (223)
|+.|+++. .+. ...++++-.+..+|..
T Consensus 198 VvtaT~s~~p~i~--~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 198 IVTTTPSETPILH--AEWLEPGQHVTAMGSD 226 (326)
T ss_pred EEEecCCCCcEec--HHHcCCCcEEEeeCCC
Confidence 99999863 232 2347787777777743
No 432
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.28 Score=37.86 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=28.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE 69 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~ 69 (223)
++++++|. |++|...++.+...|++|+.++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 46789999 89999888888888999999997653
No 433
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.29 E-value=0.86 Score=36.14 Aligned_cols=84 Identities=19% Similarity=0.212 Sum_probs=57.1
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
-.+++|.|. |.+|.+.++.++..|.+|++..+.....+.+. ..|+. +. ++.+.+++ .|+|+-++.
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~-~~G~~-v~------sl~Eaak~-----ADVV~llLP 80 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAK-ADGFE-VM------SVSEAVRT-----AQVVQMLLP 80 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHH-HcCCE-EC------CHHHHHhc-----CCEEEEeCC
Confidence 467899998 99999999999999999988776544445555 55652 21 23333332 788887776
Q ss_pred hH----HH-HHHHHhhccCcEEEE
Q 043295 113 GE----ML-EAAVANMNLFGRVAA 131 (223)
Q Consensus 113 ~~----~~-~~~~~~l~~~G~~v~ 131 (223)
.+ .+ ...+..|+++..++.
T Consensus 81 d~~t~~V~~~eil~~MK~GaiL~f 104 (335)
T PRK13403 81 DEQQAHVYKAEVEENLREGQMLLF 104 (335)
T ss_pred ChHHHHHHHHHHHhcCCCCCEEEE
Confidence 42 22 346677888776543
No 434
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.28 E-value=1.3 Score=32.82 Aligned_cols=94 Identities=16% Similarity=0.081 Sum_probs=59.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
+++.+||-. .+.|..+..+++.. .+|++++.+++..+.+++. +|...+ +.... +..+... ..+.||+|+-.
T Consensus 77 ~~~~~VLeiG~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~~~fD~I~~~ 151 (212)
T PRK00312 77 KPGDRVLEIGTGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHG-DGWKGWP--AYAPFDRILVT 151 (212)
T ss_pred CCCCEEEEECCCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEEC-CcccCCC--cCCCcCEEEEc
Confidence 788899888 78888877777664 4899999988877666533 344322 11111 1111110 11369988754
Q ss_pred CC-hHHHHHHHHhhccCcEEEEEc
Q 043295 111 VG-GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 111 ~g-~~~~~~~~~~l~~~G~~v~~g 133 (223)
.. ........+.|+++|+++..-
T Consensus 152 ~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 152 AAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred cCchhhhHHHHHhcCCCcEEEEEE
Confidence 43 344566788999999987653
No 435
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.42 Score=36.40 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=45.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecC-HHHHHHHHHhh---CCC---eeeecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGT-NEKVAILKEKL---GFD---DAFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~-~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
.++++||. |++|..+++.+...|++|+.+++. .++.+.+.+++ +.. ...|..+.....+.+.+... ++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46788999 899999998888899999887654 33433332122 331 11243333123322322211 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 88 iD~vi~~ag 96 (258)
T PRK09134 88 ITLLVNNAS 96 (258)
T ss_pred CCEEEECCc
Confidence 999999886
No 436
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.24 E-value=0.38 Score=36.10 Aligned_cols=77 Identities=19% Similarity=0.338 Sum_probs=45.0
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHH-HHHHHHh---hCCCe-ee--ecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEK-VAILKEK---LGFDD-AF--NYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~-~~--~~~~~~~~~~~i~~~~~--~~ 103 (223)
.+.+++|. |++|...+..+...|++|+.+.++..+ .+...+. .+... .+ |-.+.+.+.+.+.+... ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35688899 889999998888889999777765542 2222212 22221 11 33333223333333322 26
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|.++.+.|
T Consensus 84 id~vi~~ag 92 (248)
T PRK05557 84 VDILVNNAG 92 (248)
T ss_pred CCEEEECCC
Confidence 899998886
No 437
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.21 E-value=0.28 Score=37.16 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=45.9
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCCe-e--eecCCcccHHHHHHHhCC--CCccE
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFDD-A--FNYKEETDLKATLKRYFP--DGIDV 106 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~~~--~~~d~ 106 (223)
++++|. |++|...++.....|++|+.+.+++++.+.+.++ .+... . .|-.+.+...+.+.+... +++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367888 8999999888888899999999887655433212 23211 1 233333123333333221 26899
Q ss_pred EEcCCC
Q 043295 107 YFDNVG 112 (223)
Q Consensus 107 vid~~g 112 (223)
++.+.|
T Consensus 81 vi~~ag 86 (254)
T TIGR02415 81 MVNNAG 86 (254)
T ss_pred EEECCC
Confidence 998886
No 438
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.18 E-value=0.45 Score=33.99 Aligned_cols=40 Identities=20% Similarity=0.222 Sum_probs=34.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHH
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILK 75 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~ 75 (223)
.|..|++. .++|...++-....|++|++++++++.+..+-
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV 48 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV 48 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence 46677888 68999999999999999999999999887666
No 439
>PRK05855 short chain dehydrogenase; Validated
Probab=94.15 E-value=0.24 Score=42.48 Aligned_cols=78 Identities=19% Similarity=0.136 Sum_probs=49.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHh---hCCC-ee--eecCCcccHHHHHHHhCC--CCc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEK---LGFD-DA--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
.+.++||+ |++|...++.....|++|+.++++.++.+.+.+. .|.. .. .|-.+.+...+.+.+... +++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 45678888 8999988888888899999999998776554322 2331 11 233333122222332221 369
Q ss_pred cEEEcCCCh
Q 043295 105 DVYFDNVGG 113 (223)
Q Consensus 105 d~vid~~g~ 113 (223)
|+++++.|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999998873
No 440
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.12 E-value=0.28 Score=36.87 Aligned_cols=76 Identities=25% Similarity=0.370 Sum_probs=45.5
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEE-ecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHhCC--CCc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGS-AGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRYFP--DGI 104 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~~~--~~~ 104 (223)
++++||. |++|...+......|++|+.+ .+++++.+.+.+.+ +... + .|..+.+++.+.+..... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4688898 789988887777789999998 87776654443222 2111 1 233332122222222211 269
Q ss_pred cEEEcCCC
Q 043295 105 DVYFDNVG 112 (223)
Q Consensus 105 d~vid~~g 112 (223)
|++|.+.|
T Consensus 85 d~vi~~ag 92 (247)
T PRK05565 85 DILVNNAG 92 (247)
T ss_pred CEEEECCC
Confidence 99998776
No 441
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.12 E-value=0.29 Score=37.02 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=45.5
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEE-ecCHHHHHHHHH---hhCCCee---eecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGS-AGTNEKVAILKE---KLGFDDA---FNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~-~~~~~~~~~~~~---~~g~~~~---~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++++|. |++|...+......|++|+.. .++..+.+.+.+ ..+.... .|-.+..+....+.+... ++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999 899999998888889988764 556555433321 2333211 233332122222322221 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (250)
T PRK08063 83 LDVFVNNAA 91 (250)
T ss_pred CCEEEECCC
Confidence 899999886
No 442
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=94.09 E-value=0.29 Score=37.33 Aligned_cols=95 Identities=12% Similarity=0.160 Sum_probs=61.6
Q ss_pred hCCCEEEEE-CchHHHHHHHHHH---cCCeEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCCCCccEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKL---GGCYVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFPDGIDVY 107 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~---~g~~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~v 107 (223)
.++.+||-. .|.|..+..+++. -++++++++.++.-++.+++.+ +...-+..... +.. +...+.+|++
T Consensus 55 ~~~~~vLDlGcGtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~-d~~----~~~~~~~D~v 129 (247)
T PRK15451 55 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DIR----DIAIENASMV 129 (247)
T ss_pred CCCCEEEEEcccCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeC-Chh----hCCCCCCCEE
Confidence 677888888 7789888888874 3679999999999888877433 22211222221 221 1111247777
Q ss_pred EcCC-----Ch----HHHHHHHHhhccCcEEEEEcc
Q 043295 108 FDNV-----GG----EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 108 id~~-----g~----~~~~~~~~~l~~~G~~v~~g~ 134 (223)
+... .. ..+....+.|+|||.++....
T Consensus 130 v~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~ 165 (247)
T PRK15451 130 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 165 (247)
T ss_pred ehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 6432 11 257788899999999998764
No 443
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=94.09 E-value=1.9 Score=32.42 Aligned_cols=171 Identities=13% Similarity=0.110 Sum_probs=91.9
Q ss_pred CCCEEEEE-----CchHHHHHHHHHHcCCeEEEEecCHH---HHHHHHHhhCCCeeeecCC--cccH---HHHHHHhCCC
Q 043295 36 KGEKVFVS-----GAYGHLVGQYAKLGGCYVVGSAGTNE---KVAILKEKLGFDDAFNYKE--ETDL---KATLKRYFPD 102 (223)
Q Consensus 36 ~g~~vlI~-----g~vG~~a~qla~~~g~~v~~~~~~~~---~~~~~~~~~g~~~~~~~~~--~~~~---~~~i~~~~~~ 102 (223)
.|++.||. -+++-..++.++..|+++..|...++ +.+.+.+++|.+.++.-+- .+++ .+.+++-. +
T Consensus 5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~-g 83 (259)
T COG0623 5 EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW-G 83 (259)
T ss_pred CCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh-C
Confidence 57899998 57777888999999999999987764 2333333666655553332 2112 22222222 2
Q ss_pred CccEEEcCCCh-H--------------H---------------HHHHHHhhccCcEEEEEcccccccccccCCCCchH--
Q 043295 103 GIDVYFDNVGG-E--------------M---------------LEAAVANMNLFGRVAACGVISECADASKRAVPNMI-- 150 (223)
Q Consensus 103 ~~d~vid~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-- 150 (223)
.+|.++.|++- + . .+.+..+|.+||.++.+...+.... .+..+..
T Consensus 84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~---vPnYNvMGv 160 (259)
T COG0623 84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV---VPNYNVMGV 160 (259)
T ss_pred cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee---cCCCchhHH
Confidence 68888766652 1 0 1234568899999998887665321 1111111
Q ss_pred --------------HHHhhcceEEeeeccCccchHHHHHHHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcC
Q 043295 151 --------------DIVYKRIKIQGFLSTDHFDLHQDFISMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRG 210 (223)
Q Consensus 151 --------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~ 210 (223)
.+=.+++++.....++++..-..-+.....++....-..++......|++...--.+.+.
T Consensus 161 AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSd 234 (259)
T COG0623 161 AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSD 234 (259)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcc
Confidence 111134444444444432222222222333444444444444555677777766665544
No 444
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.36 Score=42.29 Aligned_cols=76 Identities=18% Similarity=0.287 Sum_probs=49.1
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe---eeecCCcccHHHHHHHhCC--CCcc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD---AFNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
+++++|+ |++|..+++.....|++|+.+++++++.+.+.+++ +... ..|-.+.++..+.+.+... +++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 5688999 78999988888888999999999988765554232 3211 1233333123333333222 2699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 451 ~li~~Ag 457 (657)
T PRK07201 451 YLVNNAG 457 (657)
T ss_pred EEEECCC
Confidence 9999887
No 445
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=94.06 E-value=0.52 Score=35.94 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=62.3
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCC---C----ee-eecCCcccHHHHHHHhCCCCc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGF---D----DA-FNYKEETDLKATLKRYFPDGI 104 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~---~----~~-~~~~~~~~~~~~i~~~~~~~~ 104 (223)
...++|||. ||-|..+-++.+.... +|.++.-.+.-.+.+++-++. . ++ +-. . +-..-+++...+.+
T Consensus 75 ~~p~~VLiiGgG~G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~--~-Dg~~~l~~~~~~~y 151 (246)
T PF01564_consen 75 PNPKRVLIIGGGDGGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII--G-DGRKFLKETQEEKY 151 (246)
T ss_dssp SST-EEEEEESTTSHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE--S-THHHHHHTSSST-E
T ss_pred CCcCceEEEcCCChhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE--h-hhHHHHHhccCCcc
Confidence 568999999 8889888888887755 899999888877887732321 1 11 111 1 34445555433379
Q ss_pred cEEE-cCCC----------hHHHHHHHHhhccCcEEEEEc
Q 043295 105 DVYF-DNVG----------GEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 105 d~vi-d~~g----------~~~~~~~~~~l~~~G~~v~~g 133 (223)
|+|+ |... .+.++.+.++|+++|.++.-.
T Consensus 152 DvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~ 191 (246)
T PF01564_consen 152 DVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA 191 (246)
T ss_dssp EEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence 9886 5443 145778889999999998754
No 446
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.02 E-value=0.39 Score=35.60 Aligned_cols=71 Identities=11% Similarity=0.156 Sum_probs=44.4
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee--eecCCcccHHHHHHHhCCC--CccEEEcC
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA--FNYKEETDLKATLKRYFPD--GIDVYFDN 110 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~--~~d~vid~ 110 (223)
.+++|. |.+|...+..+... ++|++++++..+.+.+.+....-.+ .|-.+. +.+.+...+ ++|.++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP----EAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH----HHHHHHHHhcCCCCEEEEC
Confidence 578888 78998888766666 8999999988776655422211122 222222 233333322 69999998
Q ss_pred CCh
Q 043295 111 VGG 113 (223)
Q Consensus 111 ~g~ 113 (223)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 873
No 447
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.01 E-value=0.94 Score=28.67 Aligned_cols=84 Identities=19% Similarity=0.169 Sum_probs=54.8
Q ss_pred EEEEE--CchHHHHHHHHHHcC---CeEEEE-ecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 39 KVFVS--GAYGHLVGQYAKLGG---CYVVGS-AGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 39 ~vlI~--g~vG~~a~qla~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
+|.|. |.+|.+.++-....| .+|+.. .+++++.+.+.++++.....+ +..+.+++ .|+||-|+-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav~ 70 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAVK 70 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEEC
Confidence 35566 888988888888888 788844 899999888875777533321 23333332 899999998
Q ss_pred hHHHHHHHH---hhccCcEEEEE
Q 043295 113 GEMLEAAVA---NMNLFGRVAAC 132 (223)
Q Consensus 113 ~~~~~~~~~---~l~~~G~~v~~ 132 (223)
...+...+. ...++..++.+
T Consensus 71 p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 71 PQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHhhccCCCEEEEe
Confidence 755444444 44566666665
No 448
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.99 E-value=0.72 Score=35.85 Aligned_cols=84 Identities=19% Similarity=0.171 Sum_probs=52.0
Q ss_pred EEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCChHHH
Q 043295 39 KVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGGEML 116 (223)
Q Consensus 39 ~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 116 (223)
+|.|. |.+|...+...+..|.+|++.++++++.+.+. +.|..... .. +. +.+ ...|+||-|+.....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~-~~g~~~~~---~~-~~-~~~-----~~aDlVilavp~~~~ 70 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAI-ERGLVDEA---ST-DL-SLL-----KDCDLVILALPIGLL 70 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCcccc---cC-CH-hHh-----cCCCEEEEcCCHHHH
Confidence 46677 88888888777778999999999988888887 66642111 11 11 111 147888888875433
Q ss_pred H----HHHHhhccCcEEEEEc
Q 043295 117 E----AAVANMNLFGRVAACG 133 (223)
Q Consensus 117 ~----~~~~~l~~~G~~v~~g 133 (223)
. .....++++..+..++
T Consensus 71 ~~~~~~l~~~l~~~~ii~d~~ 91 (279)
T PRK07417 71 LPPSEQLIPALPPEAIVTDVG 91 (279)
T ss_pred HHHHHHHHHhCCCCcEEEeCc
Confidence 2 3333444454454444
No 449
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=93.97 E-value=0.71 Score=34.18 Aligned_cols=98 Identities=21% Similarity=0.208 Sum_probs=62.5
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV 111 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 111 (223)
.++.+|+-. ++.|..+..+++..+ .++++++.++...+.+++.+....-+..... +..+ .. ...+.+|+|+...
T Consensus 38 ~~~~~vldiG~G~G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~-d~~~-~~-~~~~~~D~i~~~~ 114 (223)
T TIGR01934 38 FKGQKVLDVACGTGDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQA-DAEA-LP-FEDNSFDAVTIAF 114 (223)
T ss_pred CCCCeEEEeCCCCChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhccCCCceEEec-chhc-CC-CCCCcEEEEEEee
Confidence 567888888 777988888888877 4999999998888887733321110111111 1211 10 1123699886532
Q ss_pred C-----h--HHHHHHHHhhccCcEEEEEccc
Q 043295 112 G-----G--EMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 112 g-----~--~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
+ . ..++.+...|+++|+++.++..
T Consensus 115 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 145 (223)
T TIGR01934 115 GLRNVTDIQKALREMYRVLKPGGRLVILEFS 145 (223)
T ss_pred eeCCcccHHHHHHHHHHHcCCCcEEEEEEec
Confidence 2 1 3577888899999999987653
No 450
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.96 E-value=0.72 Score=35.79 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=65.0
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+|++....+..|..+. -.|++++|. ..||.=++.+....|++|+... +.. . ++
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtich-s~T-------------------~-~l 193 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAH-SKT-------------------R-NL 193 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEC-CCC-------------------C-CH
Confidence 45666666666666666 688999888 7899999999988899888653 211 1 23
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
.+.+++ .|+++-++|.+.+ -.-+.+++|..++.+|...
T Consensus 194 ~~~~~~-----ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 194 KQLTKE-----ADILVVAVGVPHF-IGADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHHHhh-----CCEEEEccCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 333333 8999999997654 3355789999999998643
No 451
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=93.93 E-value=1.8 Score=33.95 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=24.9
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEe
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSA 65 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~ 65 (223)
-.++.|+|. |+||..++.+..+.|+ ++..++
T Consensus 72 l~~syVVVVG~GgVGSwv~nmL~RSG~qKi~iVD 105 (430)
T KOG2018|consen 72 LTNSYVVVVGAGGVGSWVANMLLRSGVQKIRIVD 105 (430)
T ss_pred hcCcEEEEEecCchhHHHHHHHHHhcCceEEEec
Confidence 456777777 9999999999999999 565555
No 452
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.89 E-value=0.52 Score=35.50 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=31.0
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAIL 74 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~ 74 (223)
++++|. |++|...++.....|++|+++++++++.+.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~ 41 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERL 41 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 478888 8999999988888899999999988766544
No 453
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.88 E-value=0.8 Score=35.63 Aligned_cols=91 Identities=12% Similarity=0.042 Sum_probs=64.1
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE--C-chHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS--G-AYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~--g-~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-.|++....+..|..+. -.|++++|. | .+|.-++.+....|++|+.....-+ ++
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~---------------------~l 201 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD---------------------DL 201 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC---------------------CH
Confidence 45666666666666665 689999999 4 5999999999999999877652111 22
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+++ .|+++-++|.+.+- .-+.+++|..++.+|..
T Consensus 202 ~~~~~~-----ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin 238 (287)
T PRK14176 202 KKYTLD-----ADILVVATGVKHLI-KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHhh-----CCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence 222222 89999999975432 34588899999999864
No 454
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=93.83 E-value=0.38 Score=33.91 Aligned_cols=92 Identities=16% Similarity=0.206 Sum_probs=60.7
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHH-------HHHHhCCC-Ccc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKA-------TLKRYFPD-GID 105 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~i~~~~~~-~~d 105 (223)
..+|+|+ |.+|.++++..|..++-|..++.++... -....+++.++ +|.+ ++-+...+ .+|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------Ad~sI~V~~~~--swtEQe~~v~~~vg~sL~gekvD 74 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------ADSSILVDGNK--SWTEQEQSVLEQVGSSLQGEKVD 74 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------ccceEEecCCc--chhHHHHHHHHHHHHhhcccccc
Confidence 3578888 8999999999999999999888775542 22233444433 3433 34444555 899
Q ss_pred EEEcCCCh-----H---HH-------------------HHHHHhhccCcEEEEEcccc
Q 043295 106 VYFDNVGG-----E---ML-------------------EAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 106 ~vid~~g~-----~---~~-------------------~~~~~~l~~~G~~v~~g~~~ 136 (223)
.||...|+ . .+ ..+-..|+++|-+.+.|...
T Consensus 75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAka 132 (236)
T KOG4022|consen 75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKA 132 (236)
T ss_pred eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccc
Confidence 99986653 1 11 11234788999998887543
No 455
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.79 E-value=0.36 Score=32.72 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=47.3
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEe-cCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSA-GTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
+.-+|-|. |-+|..+....+..|..|.++. ++.+..+.+...++...+.+..+ .. ...|++|=++.
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----------~~-~~aDlv~iavp 77 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----------IL-RDADLVFIAVP 77 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----------GG-CC-SEEEE-S-
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----------cc-ccCCEEEEEec
Confidence 34577777 9999999999999999998886 44445566653444433333221 11 14899999999
Q ss_pred hHHHHHHHHhhccC
Q 043295 113 GEMLEAAVANMNLF 126 (223)
Q Consensus 113 ~~~~~~~~~~l~~~ 126 (223)
.+.+...+..|...
T Consensus 78 DdaI~~va~~La~~ 91 (127)
T PF10727_consen 78 DDAIAEVAEQLAQY 91 (127)
T ss_dssp CCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHh
Confidence 88777777766543
No 456
>PLN00015 protochlorophyllide reductase
Probab=93.78 E-value=0.4 Score=37.78 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=43.7
Q ss_pred CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCC--Ce----eeecCCcccHHHHHHHhCC--CCccEEEcCCC
Q 043295 44 GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGF--DD----AFNYKEETDLKATLKRYFP--DGIDVYFDNVG 112 (223)
Q Consensus 44 g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~--~~----~~~~~~~~~~~~~i~~~~~--~~~d~vid~~g 112 (223)
+++|...++.....| ++|+.++++.++.+.+.++++. .. ..|-.+.++....+.+... +++|+++++.|
T Consensus 7 ~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG 84 (308)
T PLN00015 7 SGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAA 84 (308)
T ss_pred ChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCC
Confidence 789998888777889 8999999988776655435432 11 1344443223333333222 36899998876
No 457
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.76 E-value=0.13 Score=39.39 Aligned_cols=73 Identities=15% Similarity=0.214 Sum_probs=45.6
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-eeeecCCcccHHHHHHHhCC--CCccEEEc
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-DAFNYKEETDLKATLKRYFP--DGIDVYFD 109 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~--~~~d~vid 109 (223)
.+++++|. |++|.+.++.....|++|+.+++++.+.+ ..... ...|-.+..++.+.+.+... +++|+++.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46788998 89999999988889999999987765432 11111 11233333133333332221 36899998
Q ss_pred CCC
Q 043295 110 NVG 112 (223)
Q Consensus 110 ~~g 112 (223)
+.|
T Consensus 84 ~Ag 86 (266)
T PRK06171 84 NAG 86 (266)
T ss_pred CCc
Confidence 887
No 458
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.74 E-value=0.86 Score=35.44 Aligned_cols=92 Identities=20% Similarity=0.121 Sum_probs=65.2
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+||+.......|..+. -.|++++|. ..||.-++.+....|++|+... +.. . ++
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ch-s~t-------------------~-~l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCH-SKT-------------------K-NL 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe-CCc-------------------h-hH
Confidence 45666666666666666 689999999 7899999999999999988753 211 1 23
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
.+.+++ .|+++-++|.+.+ -.-+.+++|..++.+|...
T Consensus 196 ~~~~~~-----ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 196 AELTKQ-----ADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHHh-----CCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 333333 8899999987543 2345678999999998654
No 459
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=93.71 E-value=0.49 Score=36.40 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=62.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHhhC------CCeeeecCCcccHHHHHHHhCCCCcc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEKLG------FDDAFNYKEETDLKATLKRYFPDGID 105 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~i~~~~~~~~d 105 (223)
.++++||-. .|.|..+..+++..| .+|++++.+++-++.+++... ...+ ..... +. +.+ ...++.+|
T Consensus 72 ~~~~~VLDlGcGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i-~~~~~-d~-~~l-p~~~~sfD 147 (261)
T PLN02233 72 KMGDRVLDLCCGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNI-EWIEG-DA-TDL-PFDDCYFD 147 (261)
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCe-EEEEc-cc-ccC-CCCCCCEe
Confidence 678888888 888998888888765 599999999998887763321 1111 11110 10 111 01122689
Q ss_pred EEEcCCC-----h--HHHHHHHHhhccCcEEEEEccc
Q 043295 106 VYFDNVG-----G--EMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 106 ~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.|+-..+ . ..+....+.|+|||+++.+...
T Consensus 148 ~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 148 AITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred EEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 8865332 1 3578899999999999887654
No 460
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=93.71 E-value=0.69 Score=38.91 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=62.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh-CCCeeeecCCcccHHHHHHHhCCCCccEEEcCC-
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL-GFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV- 111 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~- 111 (223)
.++.+||=. .|.|..+..+++..|++|++++.++..++.+++.. +...-+..... ++... ....+.||+|+..-
T Consensus 265 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~-d~~~~--~~~~~~fD~I~s~~~ 341 (475)
T PLN02336 265 KPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMISFALERAIGRKCSVEFEVA-DCTKK--TYPDNSFDVIYSRDT 341 (475)
T ss_pred CCCCEEEEEeccCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHhhcCCCceEEEEc-CcccC--CCCCCCEEEEEECCc
Confidence 567788888 78899899999988999999999998887776221 22111111111 11110 01122699998632
Q ss_pred ----Ch--HHHHHHHHhhccCcEEEEEcc
Q 043295 112 ----GG--EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 112 ----g~--~~~~~~~~~l~~~G~~v~~g~ 134 (223)
.. ..+..+.+.|+|||+++....
T Consensus 342 l~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 370 (475)
T PLN02336 342 ILHIQDKPALFRSFFKWLKPGGKVLISDY 370 (475)
T ss_pred ccccCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 11 357888999999999887654
No 461
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.70 E-value=0.49 Score=36.08 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=45.8
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH-HHHHHHHH---hhCCCe---eeecCCcccHHHHHHHhCC--CC
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN-EKVAILKE---KLGFDD---AFNYKEETDLKATLKRYFP--DG 103 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~-~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~ 103 (223)
++++++|. |++|...++.....|++|+.+.++. +..+.+.+ ..+... ..|-.+.++..+.+..... ++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57889999 8999999998889999988877643 33222221 223211 1233333122222222221 36
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+++.+.|
T Consensus 86 id~lv~~ag 94 (261)
T PRK08936 86 LDVMINNAG 94 (261)
T ss_pred CCEEEECCC
Confidence 899998887
No 462
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=93.70 E-value=0.26 Score=37.14 Aligned_cols=161 Identities=15% Similarity=0.121 Sum_probs=89.6
Q ss_pred CchHHHHHHHHHHcCCeEEEEecCHHH----HHHHHHhhCCCeee--ecCCcc---cHHHHHHHhCCCCccEEEcCCCh-
Q 043295 44 GAYGHLVGQYAKLGGCYVVGSAGTNEK----VAILKEKLGFDDAF--NYKEET---DLKATLKRYFPDGIDVYFDNVGG- 113 (223)
Q Consensus 44 g~vG~~a~qla~~~g~~v~~~~~~~~~----~~~~~~~~g~~~~~--~~~~~~---~~~~~i~~~~~~~~d~vid~~g~- 113 (223)
+++|.+.++-....|++|+.++++.++ .+.+.++.+.. ++ |..+.+ .+.+.+.+..++++|+++++.|.
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~ 84 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGIS 84 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESC
T ss_pred CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence 578999999999999999999999987 34444355643 33 333331 23334444454679998876542
Q ss_pred H--------------HH---------------HHHHHhhccCcEEEEEcccccccccccCCCCch---------------
Q 043295 114 E--------------ML---------------EAAVANMNLFGRVAACGVISECADASKRAVPNM--------------- 149 (223)
Q Consensus 114 ~--------------~~---------------~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--------------- 149 (223)
. .+ +.+...++++|.++.++........ .....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~---~~~~~y~~sKaal~~l~r~l 161 (241)
T PF13561_consen 85 PPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM---PGYSAYSASKAALEGLTRSL 161 (241)
T ss_dssp TGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS---TTTHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC---ccchhhHHHHHHHHHHHHHH
Confidence 0 11 2344577888999988766443211 01101
Q ss_pred -HHHHh-hcceEEeeeccCccchHHHHH---HHHHHHHHcCCCCccceeeeccCCHHHHHHHhHcCC
Q 043295 150 -IDIVY-KRIKIQGFLSTDHFDLHQDFI---SMTCDALRAGKIQPLEDISNGVDSIPSAFTGFFRGD 211 (223)
Q Consensus 150 -~~~~~-~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~ 211 (223)
..+-. +++++.....+.......+.. ++..+.+.+. .+.......+|+.++...|.+..
T Consensus 162 A~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~---~pl~r~~~~~evA~~v~fL~s~~ 225 (241)
T PF13561_consen 162 AKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKR---IPLGRLGTPEEVANAVLFLASDA 225 (241)
T ss_dssp HHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHH---STTSSHBEHHHHHHHHHHHHSGG
T ss_pred HHHhccccCeeeeeecccceeccchhccccccchhhhhhhh---hccCCCcCHHHHHHHHHHHhCcc
Confidence 12223 466666666555432222222 2333333221 11122235677888888887755
No 463
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.67 E-value=1.4 Score=32.91 Aligned_cols=98 Identities=23% Similarity=0.225 Sum_probs=62.1
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC--CeEEEEecCHHHHHHHHHhhCC---CeeeecCCcccHHHHHHHhCCCCccEEE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG--CYVVGSAGTNEKVAILKEKLGF---DDAFNYKEETDLKATLKRYFPDGIDVYF 108 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g--~~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~~~~d~vi 108 (223)
.++.+|+-. .+.|..+..+++..+ .++++++.++...+.+++.+.. ...+..... +..+ . ....+.+|+|+
T Consensus 50 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~~D~I~ 126 (239)
T PRK00216 50 RPGDKVLDLACGTGDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQG-DAEA-L-PFPDNSFDAVT 126 (239)
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEec-cccc-C-CCCCCCccEEE
Confidence 567788888 677999999999885 7999999998888877733321 111111111 1111 0 01123688886
Q ss_pred cCCC-----h--HHHHHHHHhhccCcEEEEEccc
Q 043295 109 DNVG-----G--EMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 109 d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
...+ . ..+..+..+|+++|.++.+...
T Consensus 127 ~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 160 (239)
T PRK00216 127 IAFGLRNVPDIDKALREMYRVLKPGGRLVILEFS 160 (239)
T ss_pred EecccccCCCHHHHHHHHHHhccCCcEEEEEEec
Confidence 4221 1 3577888899999999877543
No 464
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.67 E-value=0.89 Score=35.33 Aligned_cols=91 Identities=11% Similarity=0.077 Sum_probs=64.8
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+|++....+..|..+. -.|++++|. ..+|.=++.+....|++|+.....- . ++
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T--------------------~-~l 196 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT--------------------Q-NL 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC--------------------C-CH
Confidence 45666555565566555 689999998 7899999999999999888754211 1 23
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+++ .|+++-++|.+.+ -.-+.+++|..++.+|..
T Consensus 197 ~~~~~~-----ADIvIsAvGk~~~-i~~~~ik~gavVIDvGin 233 (284)
T PRK14177 197 PSIVRQ-----ADIIVGAVGKPEF-IKADWISEGAVLLDAGYN 233 (284)
T ss_pred HHHHhh-----CCEEEEeCCCcCc-cCHHHcCCCCEEEEecCc
Confidence 333332 8999999997654 236688999999999964
No 465
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=93.66 E-value=0.45 Score=33.63 Aligned_cols=95 Identities=15% Similarity=0.081 Sum_probs=58.1
Q ss_pred hhccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcc
Q 043295 16 ANGAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEET 90 (223)
Q Consensus 16 aa~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (223)
...+|++....+..|..+. -.|++++|. ..+|.-+..+....|++|+......+
T Consensus 13 ~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~--------------------- 71 (160)
T PF02882_consen 13 PGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK--------------------- 71 (160)
T ss_dssp TSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS---------------------
T ss_pred CCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC---------------------
Confidence 3445666666666676665 789999999 57999999999999999988553211
Q ss_pred cHHHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccccc
Q 043295 91 DLKATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVISE 137 (223)
Q Consensus 91 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 137 (223)
++.+.++ ..|+|+-++|.+.+ ---+.++++..++.+|....
T Consensus 72 ~l~~~~~-----~ADIVVsa~G~~~~-i~~~~ik~gavVIDvG~~~~ 112 (160)
T PF02882_consen 72 NLQEITR-----RADIVVSAVGKPNL-IKADWIKPGAVVIDVGINYV 112 (160)
T ss_dssp SHHHHHT-----TSSEEEE-SSSTT--B-GGGS-TTEEEEE--CEEE
T ss_pred cccceee-----eccEEeeeeccccc-cccccccCCcEEEecCCccc
Confidence 2222222 28899999987543 12447788989998886543
No 466
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.63 E-value=0.73 Score=31.81 Aligned_cols=90 Identities=14% Similarity=0.086 Sum_probs=61.4
Q ss_pred cccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHH
Q 043295 19 AGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLK 93 (223)
Q Consensus 19 l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 93 (223)
+|+........++.++ -.|++|+|+ ..+|.-++.+....|++|+....... ++.
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~ 66 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQ 66 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHH
Confidence 4445555555565555 689999999 78999999999889999988763221 122
Q ss_pred HHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccc
Q 043295 94 ATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 94 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
+.+++ .|+|+-++|...+ ---+.+++|..++.+|..
T Consensus 67 ~~v~~-----ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~ 102 (140)
T cd05212 67 SKVHD-----ADVVVVGSPKPEK-VPTEWIKPGATVINCSPT 102 (140)
T ss_pred HHHhh-----CCEEEEecCCCCc-cCHHHcCCCCEEEEcCCC
Confidence 22222 8899988887532 234568899888877753
No 467
>PRK03612 spermidine synthase; Provisional
Probab=93.63 E-value=1.6 Score=37.25 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=62.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCC----------CeeeecCCcccHHHHHHHhCCC
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGF----------DDAFNYKEETDLKATLKRYFPD 102 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~----------~~~~~~~~~~~~~~~i~~~~~~ 102 (223)
++.++||+. ++-|..+.++++.-+ .+|++++.+++-.+.+++.... ..+ +.... |..+.+++ .++
T Consensus 296 ~~~~rVL~IG~G~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~vi~~-Da~~~l~~-~~~ 372 (521)
T PRK03612 296 ARPRRVLVLGGGDGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TVVND-DAFNWLRK-LAE 372 (521)
T ss_pred CCCCeEEEEcCCccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EEEEC-hHHHHHHh-CCC
Confidence 567899999 888998888888655 5999999999988888831111 111 11111 33333333 234
Q ss_pred CccEEE-cCCCh-----------HHHHHHHHhhccCcEEEEEc
Q 043295 103 GIDVYF-DNVGG-----------EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 103 ~~d~vi-d~~g~-----------~~~~~~~~~l~~~G~~v~~g 133 (223)
.+|+|+ |.... +.++.+.+.|+++|.++.-.
T Consensus 373 ~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 373 KFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred CCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 799886 33211 23567888999999988654
No 468
>PRK05599 hypothetical protein; Provisional
Probab=93.60 E-value=0.45 Score=36.07 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=44.3
Q ss_pred EEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCCe--e--eecCCcccH---HHHHHHhCCCCcc
Q 043295 39 KVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFDD--A--FNYKEETDL---KATLKRYFPDGID 105 (223)
Q Consensus 39 ~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~~--~--~~~~~~~~~---~~~i~~~~~~~~d 105 (223)
+++|. +++|.+.++... .|++|+.+++++++.+.+.+++ |... . .|-.+.++. .+.+.+.. +++|
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 79 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEIS 79 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCCC
Confidence 57888 789988886655 4999999999888776554333 3221 2 233333122 23333322 3689
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 80 ~lv~nag 86 (246)
T PRK05599 80 LAVVAFG 86 (246)
T ss_pred EEEEecC
Confidence 9998776
No 469
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase. This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.
Probab=93.58 E-value=0.92 Score=33.76 Aligned_cols=94 Identities=18% Similarity=0.182 Sum_probs=57.0
Q ss_pred CCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCee--eecCCcccHHHHHHHhCCCCccEEEc----
Q 043295 37 GEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDA--FNYKEETDLKATLKRYFPDGIDVYFD---- 109 (223)
Q Consensus 37 g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vid---- 109 (223)
+.+||-. ++.|..+.++++ .+.++++++.++...+.+++.+..... +..... +..+.... .++.+|+|+-
T Consensus 46 ~~~vLdlG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~~~~~~-d~~~~~~~-~~~~~D~i~~~~~l 122 (224)
T TIGR01983 46 GLRVLDVGCGGGLLSEPLAR-LGANVTGIDASEENIEVAKLHAKKDPLLKIEYRCT-SVEDLAEK-GAKSFDVVTCMEVL 122 (224)
T ss_pred CCeEEEECCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC-CHHHhhcC-CCCCccEEEehhHH
Confidence 6677777 677888887776 467899999988877776633322111 111111 22222211 1247998864
Q ss_pred -CCCh--HHHHHHHHhhccCcEEEEEc
Q 043295 110 -NVGG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 110 -~~g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
.... ..+..+.+.|+++|.++...
T Consensus 123 ~~~~~~~~~l~~~~~~L~~gG~l~i~~ 149 (224)
T TIGR01983 123 EHVPDPQAFIRACAQLLKPGGILFFST 149 (224)
T ss_pred HhCCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3332 35677788999999987543
No 470
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.53 E-value=0.91 Score=36.12 Aligned_cols=85 Identities=19% Similarity=0.086 Sum_probs=57.3
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEc-CCC
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFD-NVG 112 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid-~~g 112 (223)
.|+++-|. |.+|.+.++.++..|.+|+...+++. -+..+ ++++.++ ++.+.+.+ .|++.- |..
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~Pl 210 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHCPL 210 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeCCC
Confidence 47789899 99999999999999999999998765 23333 4554433 23333332 676644 444
Q ss_pred hH-H----HHHHHHhhccCcEEEEEcc
Q 043295 113 GE-M----LEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 113 ~~-~----~~~~~~~l~~~G~~v~~g~ 134 (223)
.+ + -...+..|++++.+|-++-
T Consensus 211 t~~T~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 211 TPETRHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred ChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence 43 2 2356778888888887764
No 471
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.52 E-value=3.1 Score=33.10 Aligned_cols=38 Identities=21% Similarity=0.042 Sum_probs=31.7
Q ss_pred CEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHH
Q 043295 38 EKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILK 75 (223)
Q Consensus 38 ~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~ 75 (223)
++|.|. |.+|...++.+...|.+|+..+.+++..+.++
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~ 47 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALR 47 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 578888 89999999998899999999999887655443
No 472
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes.
Probab=93.47 E-value=0.61 Score=34.78 Aligned_cols=92 Identities=16% Similarity=0.244 Sum_probs=57.5
Q ss_pred EEEEE-CchHHHHHHHHHHc-CCeEEEEecCHHHHHHHHHhh---CCCeeeecCCcccHHHHHHHhCCCCccEEEc----
Q 043295 39 KVFVS-GAYGHLVGQYAKLG-GCYVVGSAGTNEKVAILKEKL---GFDDAFNYKEETDLKATLKRYFPDGIDVYFD---- 109 (223)
Q Consensus 39 ~vlI~-g~vG~~a~qla~~~-g~~v~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid---- 109 (223)
+||=. ++.|..+..+++.. +++|++++.+++..+.+++.+ |...-+..... ++.+. ..++.+|+|+.
T Consensus 2 ~vLDiGcG~G~~~~~la~~~~~~~v~gid~s~~~~~~a~~~~~~~gl~~~i~~~~~-d~~~~---~~~~~fD~I~~~~~l 77 (224)
T smart00828 2 RVLDFGCGYGSDLIDLAERHPHLQLHGYTISPEQAEVGRERIRALGLQGRIRIFYR-DSAKD---PFPDTYDLVFGFEVI 77 (224)
T ss_pred eEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEec-ccccC---CCCCCCCEeehHHHH
Confidence 45555 77888888999887 579999999988777776322 32211111111 11110 11236898874
Q ss_pred -CCCh--HHHHHHHHhhccCcEEEEEcc
Q 043295 110 -NVGG--EMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 110 -~~g~--~~~~~~~~~l~~~G~~v~~g~ 134 (223)
++.. ..+..+.+.|+|+|.++....
T Consensus 78 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 105 (224)
T smart00828 78 HHIKDKMDLFSNISRHLKDGGHLVLADF 105 (224)
T ss_pred HhCCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 2332 357788899999999987654
No 473
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.47 E-value=0.5 Score=36.86 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=45.4
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH-HHHHHHH---hhCCCe-e--eecCCcccHHHHHHHhCC--C
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE-KVAILKE---KLGFDD-A--FNYKEETDLKATLKRYFP--D 102 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~-~~~~~~~---~~g~~~-~--~~~~~~~~~~~~i~~~~~--~ 102 (223)
-++.++||. |++|...++.....|++|+.++++.. ..+.+.+ ..|... . .|-.+.+.+.+.+.+... +
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 346789999 78999988888888999999887643 2222221 223221 1 233332122222322221 2
Q ss_pred CccEEEcCCC
Q 043295 103 GIDVYFDNVG 112 (223)
Q Consensus 103 ~~d~vid~~g 112 (223)
++|++|.+.|
T Consensus 124 ~iD~lI~~Ag 133 (290)
T PRK06701 124 RLDILVNNAA 133 (290)
T ss_pred CCCEEEECCc
Confidence 6899998776
No 474
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.46 E-value=1 Score=34.88 Aligned_cols=90 Identities=17% Similarity=0.113 Sum_probs=62.3
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+|++....+..|..+. -.|.+|+|. ..+|.-.+.+....|++|+...+... ++
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~---------------------~L 189 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE---------------------NL 189 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh---------------------HH
Confidence 35666566666666655 678899888 48899988898889998888664321 22
Q ss_pred HHHHHHhCCCCccEEEcCCChHH-HHHHHHhhccCcEEEEEccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEM-LEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+++ .|+++.++|... +.. +.+++|..++.+|..
T Consensus 190 ~~~~~~-----ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~ 226 (279)
T PRK14178 190 KAELRQ-----ADILVSAAGKAGFITP--DMVKPGATVIDVGIN 226 (279)
T ss_pred HHHHhh-----CCEEEECCCcccccCH--HHcCCCcEEEEeecc
Confidence 222322 899999998542 332 337999999999865
No 475
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.46 E-value=1.2 Score=35.63 Aligned_cols=95 Identities=19% Similarity=0.147 Sum_probs=60.8
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCC-
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNV- 111 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~- 111 (223)
.++.+||=. ++.|..+..+++..+ .+|++++.+++-++.+++......+ ..... +.. .+ ....+.+|+|+.+-
T Consensus 112 ~~~~~VLDLGcGtG~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i-~~i~g-D~e-~l-p~~~~sFDvVIs~~~ 187 (340)
T PLN02490 112 DRNLKVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC-KIIEG-DAE-DL-PFPTDYADRYVSAGS 187 (340)
T ss_pred CCCCEEEEEecCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCC-eEEec-cHH-hC-CCCCCceeEEEEcCh
Confidence 467788777 777988888888764 5999999998888877733221111 11111 111 11 11123699887532
Q ss_pred ----Ch--HHHHHHHHhhccCcEEEEEc
Q 043295 112 ----GG--EMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 112 ----g~--~~~~~~~~~l~~~G~~v~~g 133 (223)
.. ..++.+.+.|++||+++.++
T Consensus 188 L~~~~d~~~~L~e~~rvLkPGG~LvIi~ 215 (340)
T PLN02490 188 IEYWPDPQRGIKEAYRVLKIGGKACLIG 215 (340)
T ss_pred hhhCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 11 35788899999999998765
No 476
>PRK04266 fibrillarin; Provisional
Probab=93.45 E-value=1.2 Score=33.40 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=58.0
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHhhCC-C--eeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGG-CYVVGSAGTNEKVAILKEKLGF-D--DAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g-~~v~~~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
+++++||=. .+.|.....+++..+ .+|++++.++..++.+.+.... . ..+..+.. .. ...... .+.+|+++-
T Consensus 71 ~~g~~VlD~G~G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~-~~-~~~~~l-~~~~D~i~~ 147 (226)
T PRK04266 71 KKGSKVLYLGAASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADAR-KP-ERYAHV-VEKVDVIYQ 147 (226)
T ss_pred CCCCEEEEEccCCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCC-Cc-chhhhc-cccCCEEEE
Confidence 788888777 777888888888774 4899999999776655411110 1 11211111 10 000011 125999984
Q ss_pred CCChH-----HHHHHHHhhccCcEEEEE
Q 043295 110 NVGGE-----MLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 110 ~~g~~-----~~~~~~~~l~~~G~~v~~ 132 (223)
....+ .+..+.+.|+|||+++..
T Consensus 148 d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 148 DVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred CCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 33321 256788899999999884
No 477
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=93.45 E-value=1 Score=35.09 Aligned_cols=43 Identities=23% Similarity=0.171 Sum_probs=34.3
Q ss_pred EEEEE--CchHHHHHHHHHHcCCeEEEEecCHHH-HHHHHHhhCCCe
Q 043295 39 KVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEK-VAILKEKLGFDD 82 (223)
Q Consensus 39 ~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~-~~~~~~~~g~~~ 82 (223)
+|-+. |.+|.-.++-+...|..|++..+++++ .+.++ ..|+..
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~-~~Ga~~ 47 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLA-AAGATV 47 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHH-HcCCcc
Confidence 34445 888888888888889999999999998 77777 777643
No 478
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=93.45 E-value=1 Score=33.14 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=27.2
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCC-eEEEEecC
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGC-YVVGSAGT 67 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~-~v~~~~~~ 67 (223)
-...+|+|. |++|..+++.....|. +++.++..
T Consensus 19 l~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 19 LLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred hcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 356788888 9999999999999998 77777744
No 479
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.45 E-value=0.91 Score=35.62 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=63.7
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE--C-chHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS--G-AYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~--g-~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+|++.......|..+. -.|++|.|. | .+|.-.+.+....|++|+...+... +.
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l 196 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DA 196 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 45666666666666666 689999988 4 8999999999999999988753321 12
Q ss_pred HHHHHHhCCCCccEEEcCCChH-HHHHHHHhhccCcEEEEEccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGE-MLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+++ .|+|+-++|.+ .+...| +++|..++.+|..
T Consensus 197 ~e~~~~-----ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 197 KALCRQ-----ADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHhc-----CCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 222222 78999999874 344333 8899999999854
No 480
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=93.40 E-value=0.33 Score=39.42 Aligned_cols=54 Identities=20% Similarity=0.214 Sum_probs=39.8
Q ss_pred hhhccccchhhHHHHHHHHh--hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHH
Q 043295 15 FANGAGTSGFTAYVGFYEIS--QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNE 69 (223)
Q Consensus 15 ~aa~l~~~~~ta~~~l~~~~--~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~ 69 (223)
++.+....+.+- .++.... -+|.+|.|. |.||..+++.+...|++|++++.+..
T Consensus 184 ~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 184 EATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred cccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 333333333333 4444444 389999999 99999999999988999999998876
No 481
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.40 E-value=0.91 Score=35.37 Aligned_cols=92 Identities=17% Similarity=0.094 Sum_probs=64.9
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+|++....+..|..+. -.|++++|. ..||.=++.+....|++|+... +.. . ++
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtich-s~T-------------------~-~l 192 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAH-SKT-------------------Q-DL 192 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeC-CCC-------------------C-CH
Confidence 35666666666666665 678999888 7899999999888899888644 211 1 23
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
.+.+++ .|+++-++|.+.+- .-+.+++|..++.+|...
T Consensus 193 ~~~~~~-----ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 193 PAVTRR-----ADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHHHhh-----CCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence 333333 89999999976442 456789999999998654
No 482
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.38 E-value=0.84 Score=35.41 Aligned_cols=91 Identities=21% Similarity=0.110 Sum_probs=63.5
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-.|++....+..|..+. -.|++++|. ..||.=.+.+....|++|+ ++++..+ ++
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt-i~hs~T~--------------------~l 194 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVD-ICHIFTK--------------------DL 194 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE-EeCCCCc--------------------CH
Confidence 45666666666666665 689999999 4899999999888899887 4433211 22
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVI 135 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 135 (223)
.+.+++ .|+++-++|.+.+ -.-+.+++|..++.+|..
T Consensus 195 ~~~~~~-----ADIvV~AvGkp~~-i~~~~vk~gavvIDvGin 231 (281)
T PRK14183 195 KAHTKK-----ADIVIVGVGKPNL-ITEDMVKEGAIVIDIGIN 231 (281)
T ss_pred HHHHhh-----CCEEEEecCcccc-cCHHHcCCCcEEEEeecc
Confidence 222332 8999999997644 235678899999999864
No 483
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=93.38 E-value=0.82 Score=39.03 Aligned_cols=33 Identities=24% Similarity=0.179 Sum_probs=29.1
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCH
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTN 68 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~ 68 (223)
.|++|.|+ |.+|...++.++..|.+|++.+++.
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~ 173 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYI 173 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCC
Confidence 36789888 9999999999999999999998753
No 484
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.35 E-value=0.46 Score=38.89 Aligned_cols=77 Identities=23% Similarity=0.236 Sum_probs=47.2
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHH------HHHHhh-CCCee-eecCCcccHHHHHHHhCCCC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVA------ILKEKL-GFDDA-FNYKEETDLKATLKRYFPDG 103 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~------~~~~~~-g~~~~-~~~~~~~~~~~~i~~~~~~~ 103 (223)
..+.+|+|. |.+|..+++.+...|++|++++++..+.+ ...+.. ++..+ .|..+.+.+...++.. +++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~~ 136 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GDP 136 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CCC
Confidence 456789999 88999998888888999999998765421 111011 22222 3444431233333322 116
Q ss_pred ccEEEcCCC
Q 043295 104 IDVYFDNVG 112 (223)
Q Consensus 104 ~d~vid~~g 112 (223)
+|+||+|.+
T Consensus 137 ~D~Vi~~aa 145 (390)
T PLN02657 137 VDVVVSCLA 145 (390)
T ss_pred CcEEEECCc
Confidence 999999886
No 485
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.29 E-value=0.51 Score=35.26 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=30.1
Q ss_pred hCCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHH
Q 043295 35 QKGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNE 69 (223)
Q Consensus 35 ~~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~ 69 (223)
-.|.+|+|. |.||..+++.+...|+++++++.+..
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 468899999 99999999999999998888775544
No 486
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.29 E-value=1 Score=35.00 Aligned_cols=92 Identities=14% Similarity=0.038 Sum_probs=65.0
Q ss_pred ccccchhhHHHHHHHHh--hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccH
Q 043295 18 GAGTSGFTAYVGFYEIS--QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDL 92 (223)
Q Consensus 18 ~l~~~~~ta~~~l~~~~--~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 92 (223)
-+||+.......|..+. -.|++++|. ..+|.=++.+....|++|+... +.. . ++
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtich-s~T-------------------~-~l 194 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAH-SRT-------------------K-DL 194 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC-CCC-------------------C-CH
Confidence 35666666666666666 679999998 7889999999988899888654 211 1 23
Q ss_pred HHHHHHhCCCCccEEEcCCChHHHHHHHHhhccCcEEEEEcccc
Q 043295 93 KATLKRYFPDGIDVYFDNVGGEMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 93 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
.+.+++ .|+++-++|...+ -.-+.+++|..++.+|...
T Consensus 195 ~~~~~~-----ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 195 PQVAKE-----ADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred HHHHhh-----CCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence 333333 8999999997644 2356788999999998653
No 487
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.27 E-value=0.83 Score=33.39 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=47.3
Q ss_pred CCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCC--Cee---eecCCcccHHHH-HHHhCC--CCcc
Q 043295 37 GEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGF--DDA---FNYKEETDLKAT-LKRYFP--DGID 105 (223)
Q Consensus 37 g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~--~~~---~~~~~~~~~~~~-i~~~~~--~~~d 105 (223)
.+..+|. +++|.+..|.....|++|.+.+.+...-+.....+|. ++. .|-.+. .-.+. +.+... +.++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a-~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKA-HDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcH-HHHHHHHHHHHHhcCCCc
Confidence 3445666 7999999999999999999988666544433326665 332 233333 22222 222222 2699
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
++++|.|
T Consensus 93 vlVncAG 99 (256)
T KOG1200|consen 93 VLVNCAG 99 (256)
T ss_pred EEEEcCc
Confidence 9999998
No 488
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.27 E-value=0.83 Score=35.95 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=45.1
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCH-HHHHHHHH---hhCCCee---eecCCcccH---HHHHHHhCC
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTN-EKVAILKE---KLGFDDA---FNYKEETDL---KATLKRYFP 101 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~-~~~~~~~~---~~g~~~~---~~~~~~~~~---~~~i~~~~~ 101 (223)
-.+++++|+ +++|...++.....|++|+..+++. .+.+.+.+ ..|.... .|-.+.+.. .+.+.+ -
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~ 87 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L 87 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence 356789999 8999999988888899999887643 23322221 2333221 222222112 222223 2
Q ss_pred CCccEEEcCCC
Q 043295 102 DGIDVYFDNVG 112 (223)
Q Consensus 102 ~~~d~vid~~g 112 (223)
+++|++|++.|
T Consensus 88 g~iD~li~nAG 98 (306)
T PRK07792 88 GGLDIVVNNAG 98 (306)
T ss_pred CCCCEEEECCC
Confidence 47999999886
No 489
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.24 E-value=0.5 Score=35.74 Aligned_cols=72 Identities=18% Similarity=0.290 Sum_probs=44.9
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCC-e--eeecCCcccHHHHHHHhCC--CCccEE
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFD-D--AFNYKEETDLKATLKRYFP--DGIDVY 107 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~~d~v 107 (223)
+++++||. |++|...++.....|++|+.++++. .. ..+.. . ..|-.+.+.+.+.+.+... +.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46789999 7899999988888899999999775 22 22221 1 1233332123333332221 368999
Q ss_pred EcCCCh
Q 043295 108 FDNVGG 113 (223)
Q Consensus 108 id~~g~ 113 (223)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998773
No 490
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.23 E-value=1.3 Score=38.57 Aligned_cols=91 Identities=10% Similarity=0.112 Sum_probs=62.5
Q ss_pred CEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCChHH
Q 043295 38 EKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGGEM 115 (223)
Q Consensus 38 ~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 115 (223)
++|+|. |.+|+..++..+..|.++++++.++++.+.++ +.|...++ .+. .-.+.+++.-=+..|.++-+.+++.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~-~~g~~v~~--GDa-t~~~~L~~agi~~A~~vv~~~~d~~ 476 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMR-KYGYKVYY--GDA-TQLELLRAAGAEKAEAIVITCNEPE 476 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHH-hCCCeEEE--eeC-CCHHHHHhcCCccCCEEEEEeCCHH
Confidence 467777 99999999999999999999999999999998 77764332 222 2223344332237899998888742
Q ss_pred H----HHHHHhhccCcEEEEE
Q 043295 116 L----EAAVANMNLFGRVAAC 132 (223)
Q Consensus 116 ~----~~~~~~l~~~G~~v~~ 132 (223)
. -...+...|+.+++.-
T Consensus 477 ~n~~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 477 DTMKIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHHHHCCCCeEEEE
Confidence 2 2334455666666543
No 491
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=93.19 E-value=1.4 Score=37.97 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=60.2
Q ss_pred CEEEEE--CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCChHH
Q 043295 38 EKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVGGEM 115 (223)
Q Consensus 38 ~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 115 (223)
++++|. |.+|+..++..+..|.++++++.++++.+.++ +.|...+. .+. .-.+.+++..=+.+|.++-+++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~-~~g~~~i~--GD~-~~~~~L~~a~i~~a~~viv~~~~~~ 493 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELR-ERGIRAVL--GNA-ANEEIMQLAHLDCARWLLLTIPNGY 493 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HCCCeEEE--cCC-CCHHHHHhcCccccCEEEEEcCChH
Confidence 567777 99999999999999999999999999999998 77764443 222 1223333332236887777666532
Q ss_pred ----HHHHHHhhccCcEEEEE
Q 043295 116 ----LEAAVANMNLFGRVAAC 132 (223)
Q Consensus 116 ----~~~~~~~l~~~G~~v~~ 132 (223)
.-.+.+...++.+++.-
T Consensus 494 ~~~~iv~~~~~~~~~~~iiar 514 (558)
T PRK10669 494 EAGEIVASAREKRPDIEIIAR 514 (558)
T ss_pred HHHHHHHHHHHHCCCCeEEEE
Confidence 22334445555555543
No 492
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.15 E-value=2.2 Score=30.20 Aligned_cols=84 Identities=20% Similarity=0.237 Sum_probs=55.4
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCHH-HHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcCCC
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTNE-KVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDNVG 112 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 112 (223)
++++|.|. |.-|.+-++-.|-.|.+|+...+... ..+.++ +-|... . +..+.+++ .|+|+-.+.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~-~~Gf~v-~------~~~eAv~~-----aDvV~~L~P 69 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAK-ADGFEV-M------SVAEAVKK-----ADVVMLLLP 69 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHH-HTT-EC-C------EHHHHHHC------SEEEE-S-
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHH-HCCCee-c------cHHHHHhh-----CCEEEEeCC
Confidence 57889999 99999999999999999998887765 667777 777632 2 44555543 889988887
Q ss_pred hHH----H-HHHHHhhccCcEEEEE
Q 043295 113 GEM----L-EAAVANMNLFGRVAAC 132 (223)
Q Consensus 113 ~~~----~-~~~~~~l~~~G~~v~~ 132 (223)
.+. + +.....|+++..++..
T Consensus 70 D~~q~~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 70 DEVQPEVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred hHHHHHHHHHHHHhhCCCCCEEEeC
Confidence 543 3 4445678888777654
No 493
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=93.14 E-value=0.45 Score=39.97 Aligned_cols=73 Identities=23% Similarity=0.296 Sum_probs=49.7
Q ss_pred CCCEEEEE--CchHHHHHHHHHHcCCeEEEEecCH---------------------HHHHHHHHhhCCCeeeecCCccc-
Q 043295 36 KGEKVFVS--GAYGHLVGQYAKLGGCYVVGSAGTN---------------------EKVAILKEKLGFDDAFNYKEETD- 91 (223)
Q Consensus 36 ~g~~vlI~--g~vG~~a~qla~~~g~~v~~~~~~~---------------------~~~~~~~~~~g~~~~~~~~~~~~- 91 (223)
.+++|+|. |+.|+.+++.++..|.+|+.....+ ...+.++ ++|++..++..-..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~-~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFT-AMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHH-HCCCEEECCCEeCCcc
Confidence 56889999 9999999999999999988877543 2345666 788765544322101
Q ss_pred HHHHHHHhCCCCccEEEcCCCh
Q 043295 92 LKATLKRYFPDGIDVYFDNVGG 113 (223)
Q Consensus 92 ~~~~i~~~~~~~~d~vid~~g~ 113 (223)
..+.+ . .++|.||.++|.
T Consensus 219 ~~~~~---~-~~~D~vilAtGa 236 (467)
T TIGR01318 219 SLDDL---L-EDYDAVFLGVGT 236 (467)
T ss_pred CHHHH---H-hcCCEEEEEeCC
Confidence 11111 1 158999999986
No 494
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.13 E-value=1.1 Score=36.05 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=32.3
Q ss_pred hCCCEEEEE---CchHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 043295 35 QKGEKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNEKVAIL 74 (223)
Q Consensus 35 ~~g~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~ 74 (223)
..+.+|||+ |.+|..+++.....|++|++++++..+.+.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 50 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHL 50 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence 456789999 7899999988888899999998877655443
No 495
>COG2521 Predicted archaeal methyltransferase [General function prediction only]
Probab=93.12 E-value=0.98 Score=33.96 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=63.4
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHhhCC-Ce-eeec----CCcccHHHHHHHhCCCCccE
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEKLGF-DD-AFNY----KEETDLKATLKRYFPDGIDV 106 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~~g~-~~-~~~~----~~~~~~~~~i~~~~~~~~d~ 106 (223)
+.|++||=+ +++|--|+..++ .|+ +|+.+..++.-+++++ ++. .. .... --. +..+.++++-+.-||.
T Consensus 133 ~~G~rVLDtC~GLGYtAi~a~~-rGA~~VitvEkdp~VLeLa~--lNPwSr~l~~~~i~iilG-D~~e~V~~~~D~sfDa 208 (287)
T COG2521 133 KRGERVLDTCTGLGYTAIEALE-RGAIHVITVEKDPNVLELAK--LNPWSRELFEIAIKIILG-DAYEVVKDFDDESFDA 208 (287)
T ss_pred ccCCEeeeeccCccHHHHHHHH-cCCcEEEEEeeCCCeEEeec--cCCCCccccccccEEecc-cHHHHHhcCCccccce
Confidence 579999998 999988877555 466 9999998777655553 222 11 1000 011 4556666655557998
Q ss_pred EEcCC------Ch----HHHHHHHHhhccCcEEEEEcccc
Q 043295 107 YFDNV------GG----EMLEAAVANMNLFGRVAACGVIS 136 (223)
Q Consensus 107 vid~~------g~----~~~~~~~~~l~~~G~~v~~g~~~ 136 (223)
+|.-. |. +-+...++.|++||++..+...+
T Consensus 209 IiHDPPRfS~AgeLYseefY~El~RiLkrgGrlFHYvG~P 248 (287)
T COG2521 209 IIHDPPRFSLAGELYSEEFYRELYRILKRGGRLFHYVGNP 248 (287)
T ss_pred EeeCCCccchhhhHhHHHHHHHHHHHcCcCCcEEEEeCCC
Confidence 87422 21 24667889999999998765443
No 496
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=93.05 E-value=1.1 Score=34.66 Aligned_cols=92 Identities=10% Similarity=-0.031 Sum_probs=59.7
Q ss_pred CCCEEEEE-CchHHHHHHHHHHc----CCeEEEEecCHHHHHHHHHhhCCCeeeecCCcccHHHHHHHhCCCCccEEEcC
Q 043295 36 KGEKVFVS-GAYGHLVGQYAKLG----GCYVVGSAGTNEKVAILKEKLGFDDAFNYKEETDLKATLKRYFPDGIDVYFDN 110 (223)
Q Consensus 36 ~g~~vlI~-g~vG~~a~qla~~~----g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 110 (223)
+..+||=. .|.|..+.++++.. +..+++++.++.-.+.+++..........+.. + + .+..+.+|+|+..
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~~-~----l-p~~~~sfD~I~~~ 158 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASSH-R----L-PFADQSLDAIIRI 158 (272)
T ss_pred CCCeEEEECCcCCHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeecc-c----C-CCcCCceeEEEEe
Confidence 44566666 67898888888764 34799999999888888733221111111100 1 0 0112369999876
Q ss_pred CChHHHHHHHHhhccCcEEEEEc
Q 043295 111 VGGEMLEAAVANMNLFGRVAACG 133 (223)
Q Consensus 111 ~g~~~~~~~~~~l~~~G~~v~~g 133 (223)
.....+....+.|+++|.++.+.
T Consensus 159 ~~~~~~~e~~rvLkpgG~li~~~ 181 (272)
T PRK11088 159 YAPCKAEELARVVKPGGIVITVT 181 (272)
T ss_pred cCCCCHHHHHhhccCCCEEEEEe
Confidence 55456778889999999999875
No 497
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=93.04 E-value=1.5 Score=31.51 Aligned_cols=91 Identities=19% Similarity=0.108 Sum_probs=56.9
Q ss_pred hCCCEEEEE-CchHHHHHHHHHHcCCeEEEEecCHHHHHHHHHhh---CCC-eeeecCCcccHHHHHHHhCCCCccEEEc
Q 043295 35 QKGEKVFVS-GAYGHLVGQYAKLGGCYVVGSAGTNEKVAILKEKL---GFD-DAFNYKEETDLKATLKRYFPDGIDVYFD 109 (223)
Q Consensus 35 ~~g~~vlI~-g~vG~~a~qla~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid 109 (223)
.++++||=. .+.|..+..+++.. .+|++++.+++..+.+++.+ +.. .++.. ++.+ ...+.+|+|+-
T Consensus 18 ~~~~~vLdlG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~----d~~~----~~~~~fD~Vi~ 88 (179)
T TIGR00537 18 LKPDDVLEIGAGTGLVAIRLKGKG-KCILTTDINPFAVKELRENAKLNNVGLDVVMT----DLFK----GVRGKFDVILF 88 (179)
T ss_pred cCCCeEEEeCCChhHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCceEEEEc----cccc----ccCCcccEEEE
Confidence 566777777 88898888888754 49999999998877776322 221 11111 1111 11225888874
Q ss_pred CCC----------------------------hHHHHHHHHhhccCcEEEEEcc
Q 043295 110 NVG----------------------------GEMLEAAVANMNLFGRVAACGV 134 (223)
Q Consensus 110 ~~g----------------------------~~~~~~~~~~l~~~G~~v~~g~ 134 (223)
... ...+..+.+.|+++|+++.+..
T Consensus 89 n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~~ 141 (179)
T TIGR00537 89 NPPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQS 141 (179)
T ss_pred CCCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEEe
Confidence 321 0135667789999999888753
No 498
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.04 E-value=1.1 Score=33.95 Aligned_cols=78 Identities=14% Similarity=0.205 Sum_probs=46.2
Q ss_pred CCCEEEEE---CchHHHHHHHHHHcCCeEEEE-ecCHHHHHHHHHhh---CCCe-e--eecCCcccHHHHHHHh---C--
Q 043295 36 KGEKVFVS---GAYGHLVGQYAKLGGCYVVGS-AGTNEKVAILKEKL---GFDD-A--FNYKEETDLKATLKRY---F-- 100 (223)
Q Consensus 36 ~g~~vlI~---g~vG~~a~qla~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~-~--~~~~~~~~~~~~i~~~---~-- 100 (223)
.+.+++|. |++|..+++.....|++|+.. .++.++.+...+++ +... + .|-.+.+++...+.+. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 35789999 899999998888889988764 56665544332132 2211 1 2333332333333322 1
Q ss_pred --C-CCccEEEcCCCh
Q 043295 101 --P-DGIDVYFDNVGG 113 (223)
Q Consensus 101 --~-~~~d~vid~~g~ 113 (223)
+ +++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 2 268999988863
No 499
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional
Probab=93.03 E-value=3.4 Score=33.79 Aligned_cols=92 Identities=23% Similarity=0.290 Sum_probs=60.1
Q ss_pred CCEEEEE-CchHHHHHHHHHHcCC-eEEEEecCHHHHHHHHHh---hCCCeeeecCCcccHHHHHHHhCCCCccEE-EcC
Q 043295 37 GEKVFVS-GAYGHLVGQYAKLGGC-YVVGSAGTNEKVAILKEK---LGFDDAFNYKEETDLKATLKRYFPDGIDVY-FDN 110 (223)
Q Consensus 37 g~~vlI~-g~vG~~a~qla~~~g~-~v~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~v-id~ 110 (223)
+.+|+=. +++|..++.+++..++ +|++++.+++-.+.+++. .+.+.+.-... +....+.. .+.+|+| +|.
T Consensus 58 ~~~vLDl~aGsG~~~l~~a~~~~~~~V~a~Din~~Av~~a~~N~~~N~~~~~~v~~~--Da~~~l~~--~~~fD~V~lDP 133 (382)
T PRK04338 58 RESVLDALSASGIRGIRYALETGVEKVTLNDINPDAVELIKKNLELNGLENEKVFNK--DANALLHE--ERKFDVVDIDP 133 (382)
T ss_pred CCEEEECCCcccHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCceEEEhh--hHHHHHhh--cCCCCEEEECC
Confidence 3555555 9999999999998886 999999999887777632 24432211111 23222322 2368977 787
Q ss_pred CCh--HHHHHHHHhhccCcEEEEE
Q 043295 111 VGG--EMLEAAVANMNLFGRVAAC 132 (223)
Q Consensus 111 ~g~--~~~~~~~~~l~~~G~~v~~ 132 (223)
.|. +.++.++..++++|.+...
T Consensus 134 ~Gs~~~~l~~al~~~~~~gilyvS 157 (382)
T PRK04338 134 FGSPAPFLDSAIRSVKRGGLLCVT 157 (382)
T ss_pred CCCcHHHHHHHHHHhcCCCEEEEE
Confidence 775 4567778888887665544
No 500
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.02 E-value=0.69 Score=35.04 Aligned_cols=75 Identities=16% Similarity=0.202 Sum_probs=43.6
Q ss_pred CEEEEE---CchHHHHHHHHHHcCCeEEEEecCHH-HHHHHHHh---hCCC-ee--eecCCcccHHHHHHHhCC--CCcc
Q 043295 38 EKVFVS---GAYGHLVGQYAKLGGCYVVGSAGTNE-KVAILKEK---LGFD-DA--FNYKEETDLKATLKRYFP--DGID 105 (223)
Q Consensus 38 ~~vlI~---g~vG~~a~qla~~~g~~v~~~~~~~~-~~~~~~~~---~g~~-~~--~~~~~~~~~~~~i~~~~~--~~~d 105 (223)
++++|. |++|..+++.....|++|+.++++.. +.+...+. .+.. .+ .|..+.+++.+.+.+... +++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 568888 89999888888888999999986543 22222112 2221 11 344433233332333221 2689
Q ss_pred EEEcCCC
Q 043295 106 VYFDNVG 112 (223)
Q Consensus 106 ~vid~~g 112 (223)
+++.+.|
T Consensus 83 ~vi~~ag 89 (256)
T PRK12745 83 CLVNNAG 89 (256)
T ss_pred EEEECCc
Confidence 9999876
Done!