Query 043296
Match_columns 650
No_of_seqs 369 out of 2703
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 05:33:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 7E-105 2E-109 891.7 72.8 595 6-618 1-604 (605)
2 3d2f_A Heat shock protein homo 100.0 9E-105 3E-109 896.4 71.2 606 8-620 3-628 (675)
3 2kho_A Heat shock protein 70; 100.0 2E-103 6E-108 880.6 64.2 594 7-618 2-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 3.5E-98 1E-102 830.0 53.4 551 6-559 3-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 3.4E-87 1.2E-91 736.5 55.0 504 7-549 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 4E-66 1.4E-70 555.7 46.4 382 6-388 22-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 7.4E-65 2.5E-69 544.4 45.7 378 6-387 17-394 (394)
8 4gni_A Putative heat shock pro 100.0 2.1E-63 7.3E-68 535.0 42.7 377 7-387 13-402 (409)
9 1dkg_D Molecular chaperone DNA 100.0 5.5E-62 1.9E-66 519.7 41.7 373 7-387 2-383 (383)
10 1jce_A ROD shape-determining p 100.0 8.2E-42 2.8E-46 358.4 25.5 311 7-387 3-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 2.4E-39 8.2E-44 311.5 26.8 215 398-618 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 8.3E-37 2.8E-41 297.2 27.0 215 400-620 1-215 (227)
13 3n8e_A Stress-70 protein, mito 100.0 3.8E-32 1.3E-36 252.3 17.8 166 394-560 17-182 (182)
14 3h0x_A 78 kDa glucose-regulate 100.0 1.5E-29 5E-34 229.2 16.0 151 399-549 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 9.5E-30 3.2E-34 229.9 13.4 151 399-549 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 1.7E-29 5.7E-34 228.0 10.1 150 399-549 2-151 (151)
17 2ych_A Competence protein PILM 100.0 3E-28 1E-32 258.6 17.1 319 6-383 12-372 (377)
18 2fsj_A Hypothetical protein TA 100.0 8.5E-29 2.9E-33 258.2 11.6 230 117-384 94-343 (346)
19 2op6_A Heat shock 70 kDa prote 99.9 2.2E-27 7.6E-32 216.5 14.3 151 399-549 2-152 (152)
20 3h1q_A Ethanolamine utilizatio 99.9 2.4E-26 8.2E-31 232.6 22.4 203 121-383 70-272 (272)
21 1k8k_A ARP3, actin-like protei 99.9 4E-26 1.4E-30 245.3 17.1 227 143-384 107-386 (418)
22 4a2a_A Cell division protein F 99.9 7E-25 2.4E-29 233.5 22.7 199 157-386 168-394 (419)
23 2fxu_A Alpha-actin-1, actin, a 99.9 2.5E-25 8.6E-30 235.3 17.7 306 7-384 5-348 (375)
24 2zgy_A Plasmid segregation pro 99.9 1.6E-22 5.4E-27 209.2 12.4 227 117-383 73-319 (320)
25 1q5l_A Chaperone protein DNAK; 99.9 8.9E-22 3E-26 174.3 12.0 119 394-512 14-132 (135)
26 1k8k_B ARP2, actin-like protei 99.8 3.6E-20 1.2E-24 196.7 6.4 214 144-384 105-363 (394)
27 4ehu_A Activator of 2-hydroxyi 99.8 3.3E-18 1.1E-22 173.0 17.7 186 168-387 68-256 (276)
28 3lof_A Heat shock 70 kDa prote 99.8 3.1E-18 1.1E-22 147.4 10.9 111 537-650 3-113 (113)
29 3js6_A Uncharacterized PARM pr 99.7 3.7E-17 1.3E-21 170.2 13.2 206 144-387 114-338 (355)
30 2p32_A Heat shock 70 kDa prote 99.6 3.1E-16 1E-20 136.2 7.4 108 538-650 13-120 (120)
31 1ud0_A HSC70, 70 kDa heat-shoc 99.6 2E-16 6.7E-21 136.4 6.1 110 541-650 2-113 (113)
32 4apw_A ALP12; actin-like prote 99.6 3.1E-16 1.1E-20 162.0 5.6 205 144-387 106-326 (329)
33 3qb0_A Actin-related protein 4 99.5 1.1E-13 3.8E-18 148.7 16.5 179 7-249 23-209 (498)
34 3dwl_A Actin-related protein 3 99.5 3.5E-14 1.2E-18 151.1 10.6 243 122-384 103-395 (427)
35 4fo0_A Actin-related protein 8 99.3 3.1E-10 1.1E-14 127.1 23.3 117 120-249 170-293 (593)
36 2d0o_A DIOL dehydratase-reacti 99.2 8.1E-12 2.8E-16 130.8 6.9 197 156-384 367-603 (610)
37 1nbw_A Glycerol dehydratase re 99.2 1.4E-11 4.8E-16 129.5 7.6 196 157-384 370-605 (607)
38 1hux_A Activator of (R)-2-hydr 98.8 2E-07 7E-12 92.9 19.2 172 174-387 77-258 (270)
39 2ews_A Pantothenate kinase; PA 98.3 3.5E-05 1.2E-09 76.5 18.2 47 337-383 237-286 (287)
40 4am6_A Actin-like protein ARP8 97.9 2.8E-05 9.7E-10 84.5 10.2 121 144-283 222-346 (655)
41 2i7n_A Pantothenate kinase 1; 97.2 0.0039 1.3E-07 63.5 13.3 70 309-383 279-358 (360)
42 3r8e_A Hypothetical sugar kina 96.9 0.073 2.5E-06 53.9 20.2 48 337-384 261-318 (321)
43 3vgl_A Glucokinase; ROK family 96.9 0.072 2.4E-06 54.0 20.0 45 169-217 96-140 (321)
44 2e2o_A Hexokinase; acetate and 96.7 0.17 5.8E-06 50.5 21.3 50 336-386 239-288 (299)
45 2ivn_A O-sialoglycoprotein end 96.7 0.25 8.5E-06 50.1 22.2 66 317-387 230-300 (330)
46 4db3_A Glcnac kinase, N-acetyl 96.4 0.48 1.6E-05 47.9 22.4 47 337-383 270-324 (327)
47 2qm1_A Glucokinase; alpha-beta 96.4 0.18 6.2E-06 50.9 19.2 48 337-384 263-320 (326)
48 3vov_A Glucokinase, hexokinase 96.4 0.6 2E-05 46.6 22.7 49 337-385 238-295 (302)
49 3l0q_A Xylulose kinase; xlylul 96.4 0.0076 2.6E-07 66.2 9.1 85 302-388 408-492 (554)
50 4bc3_A Xylulose kinase; transf 96.3 0.0098 3.4E-07 65.0 9.5 77 309-387 407-483 (538)
51 2itm_A Xylulose kinase, xylulo 96.3 0.0076 2.6E-07 65.1 8.3 78 310-388 360-437 (484)
52 2zf5_O Glycerol kinase; hypert 96.1 0.014 4.8E-07 63.2 9.3 77 309-388 367-443 (497)
53 3ll3_A Gluconate kinase; xylul 96.1 0.013 4.3E-07 63.6 8.8 77 310-388 367-443 (504)
54 3hz6_A Xylulokinase; xylulose, 96.0 0.013 4.6E-07 63.6 8.8 75 310-388 378-453 (511)
55 3i8b_A Xylulose kinase; strain 96.0 0.0095 3.3E-07 64.7 7.6 74 310-388 398-474 (515)
56 3mdq_A Exopolyphosphatase; str 95.8 0.16 5.5E-06 51.1 15.2 79 159-243 92-170 (315)
57 4htl_A Beta-glucoside kinase; 95.8 0.7 2.4E-05 45.9 19.8 50 337-386 238-292 (297)
58 2gup_A ROK family protein; sug 95.8 1.3 4.4E-05 43.8 21.7 49 337-385 228-287 (292)
59 3cer_A Possible exopolyphospha 95.7 0.025 8.7E-07 57.7 8.8 80 160-243 106-191 (343)
60 3g25_A Glycerol kinase; IDP007 95.7 0.016 5.5E-07 62.8 7.7 74 310-388 377-454 (501)
61 2ch5_A NAGK protein; transfera 95.7 2.1 7.3E-05 43.3 26.9 82 120-210 45-132 (347)
62 3ezw_A Glycerol kinase; glycer 95.6 0.015 5E-07 63.5 7.0 73 311-388 376-452 (526)
63 3jvp_A Ribulokinase; PSI-II, N 95.6 0.017 5.7E-07 63.7 7.2 80 304-388 410-490 (572)
64 1t6c_A Exopolyphosphatase; alp 95.5 0.028 9.4E-07 56.8 8.1 77 160-243 101-177 (315)
65 2dpn_A Glycerol kinase; thermu 95.5 0.032 1.1E-06 60.3 9.1 77 310-388 371-448 (495)
66 3ifr_A Carbohydrate kinase, FG 95.5 0.017 5.9E-07 62.6 6.9 77 304-388 371-450 (508)
67 4e1j_A Glycerol kinase; struct 95.5 0.014 4.9E-07 63.4 6.3 51 336-388 425-475 (520)
68 2p3r_A Glycerol kinase; glycer 95.5 0.017 5.8E-07 62.7 6.8 73 311-388 375-451 (510)
69 3h3n_X Glycerol kinase; ATP-bi 95.5 0.019 6.6E-07 62.2 7.2 77 304-388 373-453 (506)
70 2d4w_A Glycerol kinase; alpha 95.3 0.023 7.8E-07 61.6 6.9 51 336-388 403-453 (504)
71 2hoe_A N-acetylglucosamine kin 95.2 0.6 2.1E-05 48.3 17.2 48 337-384 315-370 (380)
72 3eno_A Putative O-sialoglycopr 95.1 0.8 2.7E-05 46.4 17.4 69 315-388 233-306 (334)
73 1z6r_A MLC protein; transcript 95.0 0.89 3.1E-05 47.4 18.1 44 169-216 186-229 (406)
74 1u6z_A Exopolyphosphatase; alp 95.0 0.071 2.4E-06 57.6 9.7 76 160-243 100-176 (513)
75 2w40_A Glycerol kinase, putati 94.9 0.038 1.3E-06 59.9 7.2 73 311-388 380-457 (503)
76 2uyt_A Rhamnulokinase; rhamnos 94.7 0.043 1.5E-06 59.2 7.0 48 336-386 393-440 (489)
77 2ap1_A Putative regulator prot 94.3 1.9 6.4E-05 43.4 18.1 44 169-216 120-163 (327)
78 1zc6_A Probable N-acetylglucos 94.2 4.7 0.00016 39.9 25.7 64 311-384 227-292 (305)
79 1z05_A Transcriptional regulat 94.0 2.2 7.6E-05 44.7 18.5 44 169-216 208-251 (429)
80 3h6e_A Carbohydrate kinase, FG 92.2 0.16 5.4E-06 54.5 6.2 71 309-385 362-435 (482)
81 1sz2_A Glucokinase, glucose ki 91.1 13 0.00046 37.1 22.2 50 167-217 99-156 (332)
82 2yhw_A Bifunctional UDP-N-acet 90.4 16 0.00054 36.7 22.4 57 153-216 117-174 (343)
83 3bex_A Type III pantothenate k 90.0 0.91 3.1E-05 43.8 8.6 21 8-28 4-24 (249)
84 3hi0_A Putative exopolyphospha 86.7 1.5 5E-05 47.2 8.3 76 159-242 103-178 (508)
85 3qbx_A Anhydro-N-acetylmuramic 83.7 3 0.0001 42.3 8.4 74 310-386 260-337 (371)
86 3mcp_A Glucokinase; structural 83.3 7 0.00024 39.9 11.2 28 1-28 2-30 (366)
87 2yhx_A Hexokinase B; transfera 81.8 3.1 0.00011 43.9 8.1 56 157-218 164-221 (457)
88 3ifr_A Carbohydrate kinase, FG 81.0 1 3.5E-05 48.6 4.1 27 1-27 1-27 (508)
89 3epq_A Putative fructokinase; 80.0 9 0.00031 37.9 10.4 44 169-216 97-140 (302)
90 3en9_A Glycoprotease, O-sialog 79.9 15 0.00051 39.6 13.0 204 142-380 72-297 (540)
91 3lay_A Zinc resistance-associa 79.4 18 0.00063 32.4 11.1 19 514-532 66-84 (175)
92 1woq_A Inorganic polyphosphate 78.7 17 0.00057 35.0 11.8 48 336-386 214-262 (267)
93 3cqy_A Anhydro-N-acetylmuramic 78.3 6.4 0.00022 39.9 8.6 73 310-386 267-343 (370)
94 3vth_A Hydrogenase maturation 75.5 4.2 0.00015 45.6 7.0 63 320-387 682-749 (761)
95 3ttc_A HYPF, transcriptional r 75.4 8 0.00027 42.6 9.0 64 317-385 585-651 (657)
96 4g9i_A Hydrogenase maturation 73.2 6.8 0.00023 44.2 8.0 63 319-386 693-760 (772)
97 3aap_A Ectonucleoside triphosp 72.0 4.2 0.00014 41.3 5.5 44 174-217 111-158 (353)
98 3o8m_A Hexokinase; rnaseh-like 71.8 11 0.00036 40.0 8.6 59 155-219 184-244 (485)
99 1nu0_A Hypothetical protein YQ 71.5 3.6 0.00012 35.5 4.1 20 8-27 4-23 (138)
100 3i8b_A Xylulose kinase; strain 71.0 2.8 9.6E-05 45.1 4.1 20 6-25 4-23 (515)
101 1iv0_A Hypothetical protein; r 70.6 3 0.0001 33.7 3.2 20 8-27 2-21 (98)
102 3hz6_A Xylulokinase; xylulose, 66.6 3.6 0.00012 44.2 3.9 21 6-26 4-24 (511)
103 3ezw_A Glycerol kinase; glycer 66.1 3.6 0.00012 44.5 3.7 22 5-26 2-23 (526)
104 3ll3_A Gluconate kinase; xylul 66.1 3.7 0.00013 44.0 3.8 22 6-27 3-24 (504)
105 3l0q_A Xylulose kinase; xlylul 66.1 4 0.00014 44.4 4.1 21 6-26 4-24 (554)
106 3ven_A O-carbamoyltransferase 66.0 19 0.00066 38.8 9.3 80 305-389 280-361 (576)
107 2p3r_A Glycerol kinase; glycer 64.5 4.1 0.00014 43.7 3.8 21 6-26 2-22 (510)
108 1bdg_A Hexokinase; phosphotran 64.0 28 0.00097 36.4 10.0 58 155-218 171-230 (451)
109 4bc3_A Xylulose kinase; transf 63.8 4.7 0.00016 43.6 4.1 21 6-26 9-29 (538)
110 3h3n_X Glycerol kinase; ATP-bi 63.5 5.1 0.00018 43.0 4.3 21 6-26 4-24 (506)
111 4e1j_A Glycerol kinase; struct 62.7 4.7 0.00016 43.4 3.8 20 7-26 26-45 (520)
112 3jvp_A Ribulokinase; PSI-II, N 62.0 4.8 0.00017 43.9 3.8 21 6-26 4-24 (572)
113 1vhx_A Putative holliday junct 61.8 4.5 0.00015 35.5 2.8 20 8-27 4-23 (150)
114 3djc_A Type III pantothenate k 61.4 5.9 0.0002 38.4 3.9 21 8-28 3-23 (266)
115 3cj1_A Ectonucleoside triphosp 61.0 11 0.00037 39.7 6.0 20 198-217 189-208 (456)
116 3h6e_A Carbohydrate kinase, FG 60.7 4.3 0.00015 43.2 3.0 21 6-26 5-25 (482)
117 2w40_A Glycerol kinase, putati 60.7 4.7 0.00016 43.2 3.3 21 7-27 4-24 (503)
118 2dpn_A Glycerol kinase; thermu 60.2 4.4 0.00015 43.3 3.0 20 7-26 2-21 (495)
119 2uyt_A Rhamnulokinase; rhamnos 60.1 4.7 0.00016 43.0 3.2 20 6-25 3-22 (489)
120 1hjr_A Holliday junction resol 57.3 13 0.00043 32.9 4.9 18 8-25 2-19 (158)
121 2zf5_O Glycerol kinase; hypert 57.1 6 0.00021 42.3 3.4 20 7-26 3-22 (497)
122 2aa4_A Mannac kinase, putative 56.2 20 0.00069 34.8 6.9 47 337-383 234-286 (289)
123 4fla_A Regulation of nuclear P 54.8 54 0.0018 28.5 8.5 48 571-618 96-146 (152)
124 1cza_N Hexokinase type I; stru 54.7 55 0.0019 37.7 11.1 58 155-218 630-690 (917)
125 3hm8_A Hexokinase-3; glucose, 53.7 1.1E+02 0.0037 31.8 12.1 57 156-218 160-219 (445)
126 3g25_A Glycerol kinase; IDP007 53.4 8.3 0.00028 41.2 3.8 20 7-26 6-25 (501)
127 2nr5_A Hypothetical protein SO 51.1 56 0.0019 22.3 6.1 24 567-590 40-63 (67)
128 3cet_A Conserved archaeal prot 50.8 9 0.00031 38.2 3.2 71 304-382 244-321 (334)
129 3htv_A D-allose kinase, alloki 50.4 47 0.0016 32.6 8.6 50 336-385 239-299 (310)
130 1zbs_A Hypothetical protein PG 49.4 15 0.00051 36.0 4.6 67 311-385 211-280 (291)
131 2pk2_A Cyclin-T1, protein TAT; 48.9 3.6 0.00012 41.9 0.0 8 581-588 253-260 (358)
132 3o8m_A Hexokinase; rnaseh-like 47.5 50 0.0017 34.8 8.5 25 197-221 78-102 (485)
133 3zx3_A Ectonucleoside triphosp 47.0 23 0.00077 37.1 5.7 44 173-217 151-199 (452)
134 2d4w_A Glycerol kinase; alpha 46.6 11 0.00036 40.4 3.2 20 7-26 2-21 (504)
135 2a01_A Apolipoprotein A-I; fou 46.5 14 0.00047 35.3 3.6 48 569-616 167-214 (243)
136 1saz_A Probable butyrate kinas 45.3 46 0.0016 33.9 7.8 48 336-383 295-346 (381)
137 2yhx_A Hexokinase B; transfera 44.8 83 0.0028 32.9 9.7 52 197-248 59-116 (457)
138 4ep4_A Crossover junction endo 44.6 15 0.00052 32.6 3.4 18 8-25 2-19 (166)
139 2itm_A Xylulose kinase, xylulo 44.2 13 0.00044 39.5 3.4 18 9-26 2-19 (484)
140 1zbs_A Hypothetical protein PG 43.2 17 0.00057 35.6 3.9 45 142-187 59-105 (291)
141 3nmd_A CGMP dependent protein 42.2 59 0.002 24.2 5.6 41 526-568 30-70 (72)
142 1ud0_A HSC70, 70 kDa heat-shoc 41.0 34 0.0012 27.9 4.9 37 573-609 6-48 (113)
143 1nbw_A Glycerol dehydratase re 40.4 12 0.00041 39.9 2.3 32 144-175 131-162 (607)
144 2o37_A Protein SIS1; HSP40, J- 39.5 18 0.00062 28.5 2.8 48 573-620 22-70 (92)
145 2zqm_A Prefoldin beta subunit 37.0 1.7E+02 0.0057 23.7 8.9 47 570-620 65-111 (117)
146 2pk2_A Cyclin-T1, protein TAT; 36.2 7.5 0.00026 39.5 0.0 11 374-384 82-92 (358)
147 3epq_A Putative fructokinase; 36.1 72 0.0025 31.2 7.3 50 336-385 224-289 (302)
148 3f9m_A Glucokinase; hexokinase 35.8 91 0.0031 32.6 8.2 25 197-221 75-99 (470)
149 1saz_A Probable butyrate kinas 35.5 30 0.001 35.3 4.4 21 7-27 2-22 (381)
150 1nfn_A Apolipoprotein E3; lipi 35.2 59 0.002 29.5 5.9 25 537-561 104-128 (191)
151 1msz_A DNA-binding protein smu 34.7 39 0.0013 26.3 3.8 28 146-173 34-61 (86)
152 1zxo_A Conserved hypothetical 34.1 16 0.00055 35.7 2.0 65 313-384 211-277 (291)
153 2h3g_X Biosynthetic protein; p 33.9 29 0.001 33.5 3.8 20 9-28 2-21 (268)
154 3htv_A D-allose kinase, alloki 33.7 22 0.00076 35.1 3.0 23 4-26 4-26 (310)
155 3zyy_X Iron-sulfur cluster bin 33.4 73 0.0025 34.7 7.2 57 300-357 499-555 (631)
156 3p8c_D Wiskott-aldrich syndrom 33.1 33 0.0011 33.0 3.9 6 629-634 191-196 (279)
157 2q2r_A Glucokinase 1, putative 31.6 72 0.0025 32.2 6.6 21 6-26 28-48 (373)
158 3t69_A Putative 2-dehydro-3-de 31.6 29 0.00098 34.6 3.3 47 338-387 260-306 (330)
159 1hnj_A Beta-ketoacyl-acyl carr 31.5 46 0.0016 32.7 5.0 49 310-361 211-259 (317)
160 2pih_A Protein YMCA; regulate 31.4 2.5E+02 0.0086 24.1 11.0 41 572-614 67-107 (151)
161 2k48_A Nucleoprotein; viral pr 31.2 2E+02 0.0069 22.9 7.5 20 594-613 83-102 (107)
162 3cet_A Conserved archaeal prot 29.7 32 0.0011 34.2 3.3 37 175-217 109-145 (334)
163 4am6_A Actin-like protein ARP8 29.6 22 0.00076 38.8 2.3 47 314-360 476-524 (655)
164 2ra1_A Surface layer protein; 29.1 1.5E+02 0.005 29.9 7.8 67 544-610 160-226 (412)
165 1zxo_A Conserved hypothetical 28.2 8.2 0.00028 37.9 -1.3 59 143-210 58-118 (291)
166 3tso_C RAB11 family-interactin 27.2 1.6E+02 0.0055 22.0 5.8 43 513-561 11-53 (75)
167 3hm8_A Hexokinase-3; glucose, 26.7 1.8E+02 0.006 30.2 8.4 30 197-227 57-86 (445)
168 4fi5_A Nucleoprotein; structur 26.6 1.7E+02 0.006 23.6 6.4 21 594-614 70-90 (113)
169 1bdg_A Hexokinase; phosphotran 26.5 1.9E+02 0.0065 30.0 8.8 24 197-220 66-89 (451)
170 1gs9_A Apolipoprotein E, APOE4 26.4 3.3E+02 0.011 23.8 10.9 63 514-584 83-145 (165)
171 3r2p_A Apolipoprotein A-I; amp 26.1 1.1E+02 0.0037 27.5 6.0 44 515-560 67-110 (185)
172 1naf_A ADP-ribosylation factor 25.9 3.3E+02 0.011 23.7 9.2 105 516-622 29-144 (158)
173 3nuw_A 2-OXO-3-deoxygalactonat 25.6 47 0.0016 32.4 3.6 44 338-384 248-291 (295)
174 2ic9_A Nucleocapsid protein; h 25.1 2.5E+02 0.0086 22.1 7.5 64 541-616 10-75 (96)
175 2dfs_A Myosin-5A; myosin-V, in 24.9 2.7E+02 0.0092 32.6 10.5 14 574-587 1033-1046(1080)
176 1ub7_A 3-oxoacyl-[acyl-carrier 24.9 61 0.0021 31.8 4.5 48 311-361 214-261 (322)
177 2ebd_A 3-oxoacyl-[acyl-carrier 24.6 66 0.0023 31.3 4.7 46 313-361 206-251 (309)
178 2f9w_A Pantothenate kinase; CO 24.4 55 0.0019 31.6 3.8 22 7-28 23-45 (271)
179 2e1z_A Propionate kinase; TDCD 24.3 75 0.0026 32.6 5.0 42 315-360 313-355 (415)
180 1f5n_A Interferon-induced guan 24.3 2.2E+02 0.0076 30.7 9.0 65 542-615 518-582 (592)
181 1zow_A 3-oxoacyl-[acyl-carrier 23.2 1.3E+02 0.0045 29.2 6.6 47 312-361 207-253 (313)
182 3p8c_D Wiskott-aldrich syndrom 22.8 44 0.0015 32.2 2.7 13 624-636 190-202 (279)
183 3zyy_X Iron-sulfur cluster bin 22.7 2.5E+02 0.0086 30.5 9.0 95 198-348 205-301 (631)
184 2q2r_A Glucokinase 1, putative 22.3 51 0.0018 33.3 3.4 49 337-385 305-371 (373)
185 3uun_A Dystrophin; triple heli 21.5 2.2E+02 0.0074 22.6 6.7 19 542-560 8-26 (119)
186 2qm1_A Glucokinase; alpha-beta 20.7 2.4E+02 0.0081 27.4 8.0 30 199-228 6-35 (326)
187 3s84_A Apolipoprotein A-IV; fo 20.1 5.7E+02 0.019 24.3 12.3 51 538-588 87-142 (273)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=6.8e-105 Score=891.73 Aligned_cols=595 Identities=50% Similarity=0.798 Sum_probs=563.4
Q ss_pred CCcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcC-CcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCCh
Q 043296 6 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDP 84 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 84 (650)
|+.+||||||||||+||++.+|.++++.|..|++++||+|+|.+ +++++|..|+.+...+|.++++++|||||+.++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 34699999999999999999999999999999999999999974 58999999999999999999999999999999999
Q ss_pred hhhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHH
Q 043296 85 SVQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKD 164 (650)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~ 164 (650)
.++...+.+||++....++.+.+.+ . +..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~--~--~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEE--C--CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 9999999999999987777766654 2 46899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeC----CEEEEEEeeCCCCCChhHHH
Q 043296 165 AGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFD 240 (650)
Q Consensus 165 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~----~~~~v~~~~~~~~lGG~~~d 240 (650)
|++.|||+++++++||+|||++|++.... .+.++||||+||||||++++++.+ +.++++++.++.++||.+||
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~~---~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D 233 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSCC---SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhccC---CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHH
Confidence 99999999999999999999999887643 578999999999999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccC----eeEEEEEcHHHHHHHHHHHH
Q 043296 241 NRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEG----IDFYATITRARFEELNMDLF 316 (650)
Q Consensus 241 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~----~~~~~~itr~~fe~~~~~~~ 316 (650)
+.|++|+.++|+++++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.++|||++|+++|+|++
T Consensus 234 ~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~ 313 (605)
T 4b9q_A 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (605)
T ss_dssp HHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHH
Confidence 99999999999999999988999999999999999999999999998888766543 67889999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcCCCCccccc
Q 043296 317 RKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQD 396 (650)
Q Consensus 317 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~ 396 (650)
+++..+|+++|+++++...+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. .++
T Consensus 314 ~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~ 388 (605)
T 4b9q_A 314 NRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKD 388 (605)
T ss_dssp HHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCS
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCc
Confidence 99999999999999999999999999999999999999999999 6788899999999999999999999975 578
Q ss_pred eEEEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCC
Q 043296 397 LLLLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRG 476 (650)
Q Consensus 397 ~~~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~ 476 (650)
+.+.|++|++||+++.+|.+.+||+||++||++++++|++..|+|+.+.|++|||++..+.+|..||+|.|.|+||.|+|
T Consensus 389 ~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g 468 (605)
T 4b9q_A 389 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 468 (605)
T ss_dssp EEEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred eEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHH
Q 043296 477 VPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMR 556 (650)
Q Consensus 477 ~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r 556 (650)
.++|+|+|++|.||+|+|++.++.||++.+++|++. ..||++|+++++++++++..+|++.+++.++||+||+|+|.++
T Consensus 469 ~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~ 547 (605)
T 4b9q_A 469 MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTR 547 (605)
T ss_dssp CCCEEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999886 4699999999999999999999999999999999999999999
Q ss_pred hhccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHhc
Q 043296 557 NTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 618 (650)
Q Consensus 557 ~~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~e 618 (650)
+.|++ +..++++++++++...++++++||+.+ +.++|++++++|++.++||..++++
T Consensus 548 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 548 KQVEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHh--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99975 778899999999999999999999976 7999999999999999999999886
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=8.5e-105 Score=896.37 Aligned_cols=606 Identities=28% Similarity=0.480 Sum_probs=565.8
Q ss_pred cEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChhhh
Q 043296 8 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQ 87 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 87 (650)
.+||||||||||+||++.+|.++++.|+.|++.+||+|+|.+++++||..|+.+...+|.++++++||+||+.++++.++
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 043296 88 SDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGA 167 (650)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~ 167 (650)
.+.+++||++....++.+.+.+.+.++.+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999999888888888888888778899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeecchhHHHHHhcccccccCC---CCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHH
Q 043296 168 IAGLNVMRIINEPTAAAIAYGLDKKASR---TGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLV 244 (650)
Q Consensus 168 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~---~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 244 (650)
.|||+++++++||+|||++|++.+.... ..+.++||||+||||||+|++++.++.++++++.++.++||++||+.|+
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~ 242 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHH
Confidence 9999999999999999999988653211 3578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHH
Q 043296 245 NHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVE 324 (650)
Q Consensus 245 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~ 324 (650)
+|+.++|.++++.++..+++++.+|+.+||++|+.||.+..+.+.++.++++.++.+.|||++|+++|+|+++++..+|+
T Consensus 243 ~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~ 322 (675)
T 3d2f_A 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVT 322 (675)
T ss_dssp HHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888999999999999999999999988899999888899999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcCCCCccccceEEEeecc
Q 043296 325 KCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTP 404 (650)
Q Consensus 325 ~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~ 404 (650)
++|+++++++.+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++ .++++++.+.|++|
T Consensus 323 ~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv~p 399 (675)
T 3d2f_A 323 KALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDIHP 399 (675)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEEEC
T ss_pred HHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC--CCcccceEEEeeee
Confidence 999999999999999999999999999999999999 578888999999999999999999985 45688999999999
Q ss_pred ccceEEeeCC----EEEEEEeCCCCCCccceeeeeecccCcceEEEEeecccccccc-CCcceeEEEecCCCCCCCCCc-
Q 043296 405 LSLGIETAGG----VMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTK-DNNLLGTFELKGIPPAPRGVP- 478 (650)
Q Consensus 405 ~~~gi~~~~~----~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~-~~~~lg~~~l~~~~~~~~~~~- 478 (650)
++||+++.++ .+.+||++|++||++++.+|++..+++ +.+. |+|++..+. +|..||+|.|.|+||.|.|.+
T Consensus 400 ~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~ 476 (675)
T 3d2f_A 400 YSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQDSV 476 (675)
T ss_dssp SCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSCSCE
T ss_pred cceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCCCcc
Confidence 9999999876 499999999999999999999876643 3332 789988887 999999999999999999975
Q ss_pred eeEEEEEEcCCceEEEEEe----------ecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhH
Q 043296 479 QINVCFDIDANGILHVSAE----------DKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKL 548 (650)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~----------~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~L 548 (650)
+|+|+|.+|.||+|+|++. ++.+++..+++|++...+||++++++++++++++..+|+..+++.++||+|
T Consensus 477 ~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~l 556 (675)
T 3d2f_A 477 PVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTL 556 (675)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 8999999999999999995 678899999999987668999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchhhhcccCHHHHHHHHHHHHHHHHHHcCC-CCcCHHHHHHHHHHHHHhHHHHHHHHhcCC
Q 043296 549 ENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGN-QLAEVDEFEDKLKELEGLCNPIIAKMYQGD 620 (650)
Q Consensus 549 E~~iy~~r~~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~-~~a~~~~~~~kl~eL~~~~~~i~~r~~e~~ 620 (650)
|+|+|++|+.|++ .+..++++++++++...++++++|||++ .+++.++|++|+++|+++++||..|++|..
T Consensus 557 e~~i~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~ 628 (675)
T 3d2f_A 557 EEYIYTLRGKLEE-EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKE 628 (675)
T ss_dssp HHHHHHHHHHHTT-TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999975 4888999999999999999999999976 467999999999999999999999988864
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.6e-103 Score=880.58 Aligned_cols=594 Identities=51% Similarity=0.811 Sum_probs=559.3
Q ss_pred CcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEc-CCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChh
Q 043296 7 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPS 85 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (650)
..+||||||||||+||++.+|.++++.|+.|++++||+|+|. +++++||..|+.+...+|.++++++||++|+.++++.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 359999999999999999999999999999999999999995 5789999999999999999999999999999999999
Q ss_pred hhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHH
Q 043296 86 VQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDA 165 (650)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 165 (650)
++...+.+||+++...++.+.+.+ .+ ..++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A 157 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 998888999999877777776655 33 68999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEe----CCEEEEEEeeCCCCCChhHHHH
Q 043296 166 GAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDN 241 (650)
Q Consensus 166 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~ 241 (650)
++.|||+++++++||+|||++|+++... .+.++||||+||||||++++++. ++.++++++.++.++||++||+
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~~---~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSSS---SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHHcCCceEEEecCHHHHHHHhhhcccC---CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 9999999999999999999999876542 57889999999999999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccC----eeEEEEEcHHHHHHHHHHHHh
Q 043296 242 RLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEG----IDFYATITRARFEELNMDLFR 317 (650)
Q Consensus 242 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~----~~~~~~itr~~fe~~~~~~~~ 317 (650)
.|++|+.++|+++++.++..+++++.+|+.+||++|+.||....+.+.++.+.++ .++.++|||++|+++|+|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~ 314 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999999988899999999999999999999999888888876652 567889999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcCCCCccccce
Q 043296 318 KCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDL 397 (650)
Q Consensus 318 ~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~ 397 (650)
++..+|+++|+++++.+.+|+.|+||||+||+|+|++.|++.| +.++....||++|||+|||++|+.+++. ++++
T Consensus 315 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~ 389 (605)
T 2kho_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDV 389 (605)
T ss_dssp GGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCC
T ss_pred HHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCc
Confidence 9999999999999999899999999999999999999999999 5788899999999999999999998864 5788
Q ss_pred EEEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCC
Q 043296 398 LLLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGV 477 (650)
Q Consensus 398 ~~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~ 477 (650)
.+.|++|++||+++.+|.+.+||+||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.
T Consensus 390 ~l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~ 469 (605)
T 2kho_A 390 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 469 (605)
T ss_dssp CCSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTC
T ss_pred eEEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHh
Q 043296 478 PQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRN 557 (650)
Q Consensus 478 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~ 557 (650)
++|+|+|++|.||+|+|++.+..||+..+++|++. .+||++|+++++++++++..+|+..+++.++||+||+|+|++|+
T Consensus 470 ~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~ 548 (605)
T 2kho_A 470 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRK 548 (605)
T ss_dssp SCEEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987 77999999999999999999999999999999999999999999
Q ss_pred hccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHhc
Q 043296 558 TVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 618 (650)
Q Consensus 558 ~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~e 618 (650)
.|++ +..++++++++++.+.++++++||+++ +.++|++++++|+++++||..|+++
T Consensus 549 ~l~~--~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 549 QVEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9975 788999999999999999999999965 8999999999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=3.5e-98 Score=829.95 Aligned_cols=551 Identities=81% Similarity=1.201 Sum_probs=525.4
Q ss_pred CCcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChh
Q 043296 6 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPS 85 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (650)
|..+||||||||||+||++.+|.++++.|+.|++++||+|+|.+++++||..|+.++..+|.++++++|||||+.++++.
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 45699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHH
Q 043296 86 VQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDA 165 (650)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 165 (650)
++..++.+||.+.. .++.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 83 v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A 161 (554)
T 1yuw_A 83 VQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA 161 (554)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 99999999999984 47788888888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHH
Q 043296 166 GAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVN 245 (650)
Q Consensus 166 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 245 (650)
++.|||+++++++||+|||++|+.+... ..+.++||||+||||||++++++.++.++++++.++.++||++||+.|++
T Consensus 162 ~~~AGl~~~~li~EP~AAAlay~~~~~~--~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 239 (554)
T 1yuw_A 162 GTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239 (554)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTCSTTC--SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeCcHHHHHHHHHhhccC--CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999886542 24689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHHH
Q 043296 246 HFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEK 325 (650)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~ 325 (650)
++.++|.++++.++..+++.+.+|+.+||++|+.||....+.+.++.++++.++...|+|++|+++++|+++++..+|++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~ 319 (554)
T 1yuw_A 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEK 319 (554)
T ss_dssp HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998889999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcCCCCccccceEEEeeccc
Q 043296 326 CLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPL 405 (650)
Q Consensus 326 ~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~~ 405 (650)
+|+++++.+.+|+.|+||||+||+|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++++++.+.|++|+
T Consensus 320 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~ 399 (554)
T 1yuw_A 320 ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPL 399 (554)
T ss_dssp HHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSS
T ss_pred HHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeee
Confidence 99999999899999999999999999999999999778888999999999999999999998754556788999999999
Q ss_pred cceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCCceeEEEEE
Q 043296 406 SLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFD 485 (650)
Q Consensus 406 ~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~i~v~~~ 485 (650)
+||+++.+|.+.++|+||++||++++.+|++..|+|+.+.|.+|||++....+|..||+|.|.|+|+.|+|.++|+|+|.
T Consensus 400 slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~ 479 (554)
T 1yuw_A 400 SLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479 (554)
T ss_dssp CEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEE
T ss_pred EEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHhhc
Q 043296 486 IDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTV 559 (650)
Q Consensus 486 ~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~~L 559 (650)
+|.||+|+|++.+..+|+..+++|++..++||++|+++++++++++..+|+..+++.++||+||+|+|.+|+.|
T Consensus 480 id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp ECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred EccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998878899999999999999999999999999999999999999999876
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=3.4e-87 Score=736.50 Aligned_cols=504 Identities=54% Similarity=0.875 Sum_probs=468.7
Q ss_pred CcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChhh
Q 043296 7 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSV 86 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 86 (650)
..+||||||||||++|++.+|.++++.|+.|++++||+|+|.+++++||..|+.+...+| ++++++||++|+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~---- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK---- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC----
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE----
Confidence 359999999999999999999999999999999999999998889999999999999999 999999999998432
Q ss_pred hhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 043296 87 QSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAG 166 (650)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 166 (650)
+ ...+ ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 77 ----------~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~ 132 (509)
T 2v7y_A 77 ----------V------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132 (509)
T ss_dssp ----------E------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ----------E------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 1 1122 468999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHH
Q 043296 167 AIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNH 246 (650)
Q Consensus 167 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~ 246 (650)
+.|||+++++++||+|||++|+.+.. .+.++||||+||||||++++++.++.++++++.++.++||.+||+.|+++
T Consensus 133 ~~AGl~~~~li~Ep~AAAlay~~~~~----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 133 RIAGLEVERIINEPTAAALAYGLDKE----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTGGGS----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HHcCCCeEEEecCHHHHHHHHhhccC----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999998653 57899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEccccc---C-eeEEEEEcHHHHHHHHHHHHhHHHHH
Q 043296 247 FVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYE---G-IDFYATITRARFEELNMDLFRKCMEP 322 (650)
Q Consensus 247 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~fe~~~~~~~~~i~~~ 322 (650)
+.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+.+ | .++.+.|||++|+++++|+++++..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 288 (509)
T 2v7y_A 209 LVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGP 288 (509)
T ss_dssp HHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888999999999999999999999888888886654 2 46778999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcCCCCccccceEEEee
Q 043296 323 VEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDV 402 (650)
Q Consensus 323 i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~ 402 (650)
|+++|+++++...+|+.|+||||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++. ++++.+.|+
T Consensus 289 i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv 363 (509)
T 2v7y_A 289 VRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDV 363 (509)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCB
T ss_pred HHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEe
Confidence 99999999998889999999999999999999999999 5778889999999999999999999864 568899999
Q ss_pred ccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCCceeEE
Q 043296 403 TPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINV 482 (650)
Q Consensus 403 ~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~i~v 482 (650)
+|++||+++.++.+.++|+||++||++++..|++..|+|+.+.|.+|||++....+|..||+|.|.++||.|+|.++|++
T Consensus 364 ~p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v 443 (509)
T 2v7y_A 364 TPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEV 443 (509)
T ss_dssp CSSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEE
T ss_pred eccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHH
Q 043296 483 CFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLE 549 (650)
Q Consensus 483 ~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE 549 (650)
+|++|.||+|+|++.+..+|+..+++|++. .+||++|+++++++++++..+|+..+++.++||+||
T Consensus 444 ~f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 444 TFDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp EEEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EEEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 999999999999999999999999999987 679999999999999999999999999999999987
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=4e-66 Score=555.69 Aligned_cols=382 Identities=81% Similarity=1.213 Sum_probs=362.8
Q ss_pred CCcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChh
Q 043296 6 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPS 85 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (650)
...+||||||||||++|++.+|.++++.++.|++++||+|+|.+++++||..|..++..+|.++++++|+++|+.++++.
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHH
Q 043296 86 VQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDA 165 (650)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 165 (650)
++...+.+||.+.. .++.+.+.+.+.+....++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999999985 67888888988887789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHH
Q 043296 166 GAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVN 245 (650)
Q Consensus 166 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 245 (650)
++.|||+++.+++||+|||++|+.........+.+++|||+||||||++++++.++.++++++.++..+||.+||+.|++
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 99999999999999999999998876533335789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHHH
Q 043296 246 HFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEK 325 (650)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~ 325 (650)
++.++|.++++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|++|+++++|+++++..+|.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999889999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcC
Q 043296 326 CLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 326 ~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
+|+.+++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999988899999999999999999999999997788999999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=7.4e-65 Score=544.36 Aligned_cols=378 Identities=67% Similarity=1.043 Sum_probs=360.9
Q ss_pred CCcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChh
Q 043296 6 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPS 85 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (650)
+..+||||||||||++|++.+|.++++.++.|++++||+|+|.++++++|..|..+...+|.++++++|+++|++++++.
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 96 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRS 96 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHH
Q 043296 86 VQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDA 165 (650)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 165 (650)
++...+.+||.+. ..++.+.+.+.+.+....++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 97 VQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 9999999999988 677888888888887889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHH
Q 043296 166 GAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVN 245 (650)
Q Consensus 166 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 245 (650)
++.|||+++.+++||+|||++|+..... .+.+++|||+||||||++++++.++.++++++.++..+||.+||+.|++
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~---~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~ 252 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKSD---KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVR 252 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSCS---SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccCC---CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHH
Confidence 9999999999999999999999876542 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHHH
Q 043296 246 HFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEK 325 (650)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~ 325 (650)
++.++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.++.++...++|++|+++++++++++..+|.+
T Consensus 253 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 332 (394)
T 3qfu_A 253 QLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEK 332 (394)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHc
Q 043296 326 CLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 326 ~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
+|+.+++...+++.|+|+||+|++|+|++.|++.|++.++..+.||+++||+|||++|+.++
T Consensus 333 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 333 VLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999999889999999999999999999999999778899999999999999999999874
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2.1e-63 Score=534.99 Aligned_cols=377 Identities=31% Similarity=0.541 Sum_probs=341.4
Q ss_pred CcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChhh
Q 043296 7 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSV 86 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 86 (650)
+.+||||||||||++|++.+|.++++.|+.|++++||+|+|.+++++||..|..+...+|.++++++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999887665
Q ss_pred hhhcccCCeEEEeCCCCCceEEEEEC----CcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHH
Q 043296 87 QSDMRHWPFKVASGPGDKPMIAVTYK----GEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQAT 162 (650)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l 162 (650)
+... +++.+. ..++.+.+.+... +....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++
T Consensus 93 ~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 5443 233322 2455555655543 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHH
Q 043296 163 KDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 242 (650)
Q Consensus 163 ~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 242 (650)
++|++.|||+++.+++||+|||++|+.... ....+.++||||+||||||++++++.++.++++++.++..+||.+||+.
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~-~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 248 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPE-ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKV 248 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccc-cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHH
Confidence 999999999999999999999999987642 1246889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcC--CCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHH
Q 043296 243 LVNHFVAEFRRKHK--KDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCM 320 (650)
Q Consensus 243 l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~ 320 (650)
|++++.++|..+++ .+...+++.+.+|+.+||++|+.||......+.++.+.++.++...|||++|+++++|+++++.
T Consensus 249 i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~ 328 (409)
T 4gni_A 249 LIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFN 328 (409)
T ss_dssp HHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHH
Confidence 99999999999988 7788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCc-cc------cccCCcchhHHhHHHHHHHHHc
Q 043296 321 EPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGK-EL------CKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 321 ~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~-~i------~~~~~p~~ava~GAa~~a~~~~ 387 (650)
.+|+++|+++++...+|+.|+|+||+|++|+|++.|++.|+.. ++ ....||++|||+|||++|+...
T Consensus 329 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 329 RLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhh
Confidence 9999999999999889999999999999999999999999644 34 5788999999999999999765
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=5.5e-62 Score=519.71 Aligned_cols=373 Identities=52% Similarity=0.843 Sum_probs=340.3
Q ss_pred CcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcC-CcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChh
Q 043296 7 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPS 85 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (650)
+.+||||||||||++|++.+|.++++.|++|++++||+|+|.. ++++||..|+.+...+|.++++++|++||+.++++.
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 3589999999999999999999999999999999999999964 679999999999999999999999999999999998
Q ss_pred hhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHH
Q 043296 86 VQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDA 165 (650)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 165 (650)
++...+.+||.+....++...+.+ .+ ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 988888999998877777666554 33 57999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEe----CCEEEEEEeeCCCCCChhHHHH
Q 043296 166 GAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDN 241 (650)
Q Consensus 166 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~ 241 (650)
++.||++++.+++||+|||++|+.... .++.++||||+||||||+++++.. ++.++++++.++..+||++||+
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~---~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKG---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccC---CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 999999999999999999999987653 257799999999999999999998 5788889888889999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEccccc---C-eeEEEEEcHHHHHHHHHHHHh
Q 043296 242 RLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYE---G-IDFYATITRARFEELNMDLFR 317 (650)
Q Consensus 242 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~fe~~~~~~~~ 317 (650)
.|++++.++|..+++.++..+++.+.+|+..||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~ 314 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 999999999999888888888999999999999999999998888888876553 2 456789999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHc
Q 043296 318 KCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 318 ~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
++.++|+++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.++
T Consensus 315 ~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 315 RSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999988889999999999999999999999999 57788899999999999999987653
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=8.2e-42 Score=358.42 Aligned_cols=311 Identities=26% Similarity=0.356 Sum_probs=239.4
Q ss_pred CcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCC--c-EEecHHHHHhHhhCcCchhhhhhHhcCCCCCC
Q 043296 7 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT--E-RLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSD 83 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 83 (650)
+.+|||||||+||++++..++ .++ .+||+|+|..+ + .++|.+|+....++|.++..
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------ 61 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------ 61 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE------------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE------------
Confidence 469999999999999875433 222 38999999765 3 47999998877777766431
Q ss_pred hhhhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHH
Q 043296 84 PSVQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATK 163 (650)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~ 163 (650)
.+|++ ++ .+ .....++++++++|++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 --------~~p~~-----~g--~i-------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 --------IRPMR-----DG--VI-------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp --------ECCEE-----TT--EE-------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred --------EecCC-----CC--ee-------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 01221 11 00 00113566666666655432 1233 478999999999999999999
Q ss_pred HHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHH
Q 043296 164 DAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRL 243 (650)
Q Consensus 164 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 243 (650)
+|++.||++++.+++||+|||++|+.... ++.+++|||+||||||+++++... . + ..++..+||++||+.|
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~----~~~~~lVvDiGggttdvsv~~~~~--~--~-~~~~~~lGG~~id~~l 186 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE----EPSGNMVVDIGGGTTEVAVISLGS--I--V-TWESIRIAGDEMDEAI 186 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT----SSSCEEEEEECSSCEEEEEEETTE--E--E-EEEEESCSHHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC----CCceEEEEEeCCCeEEEEEEEcCC--E--E-eeCCCCccChhHHHHH
Confidence 99999999999999999999999986543 467899999999999999998743 1 1 3456789999999999
Q ss_pred HHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCc------eEEEEc--ccccCeeEEEEEcHHHHHHHHHHH
Q 043296 244 VNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQ------TTIEID--SLYEGIDFYATITRARFEELNMDL 315 (650)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~------~~~~i~--~~~~~~~~~~~itr~~fe~~~~~~ 315 (650)
.+++.+++. .++. ...||++|+.|+.... ..+.++ .+.++.++.+.|+|++|+++++|.
T Consensus 187 ~~~l~~~~~----~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~ 253 (344)
T 1jce_A 187 VQYVRETYR----VAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSV 253 (344)
T ss_dssp HHHHHHHHC----EECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHH
T ss_pred HHHHHHHhC----cccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHH
Confidence 999987653 2221 4679999999997642 244443 445677788999999999999999
Q ss_pred HhHHHHHHHHHHHhcCCC--CCCC-CeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHc
Q 043296 316 FRKCMEPVEKCLRDSKID--KSLV-HDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 316 ~~~i~~~i~~~l~~~~~~--~~~i-~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
++++.+.|+++|+.++.. .+.+ +.|+|+||+|++|+|++.|++.| +.++....||+++||+||++++..++
T Consensus 254 ~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 254 VVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 999999999999987532 1224 68999999999999999999999 46788888999999999999987544
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=2.4e-39 Score=311.51 Aligned_cols=215 Identities=48% Similarity=0.738 Sum_probs=206.2
Q ss_pred EEEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCC
Q 043296 398 LLLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGV 477 (650)
Q Consensus 398 ~~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~ 477 (650)
++.|++|+|+|+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHh
Q 043296 478 PQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRN 557 (650)
Q Consensus 478 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~ 557 (650)
++|+|+|++|.||+|+|++.+..||+...++|++. ..||++||++++++++++..+|+..+++.++||.||+|+|.+|+
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986 46999999999999999999999999999999999999999999
Q ss_pred hccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHhc
Q 043296 558 TVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 618 (650)
Q Consensus 558 ~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~e 618 (650)
.|++ +..++++++++++...++++++||+++ +.++|++++++|++++.||..|+++
T Consensus 161 ~l~~--~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHH--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9975 778899999999999999999999987 8999999999999999999999887
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=8.3e-37 Score=297.16 Aligned_cols=215 Identities=34% Similarity=0.571 Sum_probs=204.7
Q ss_pred EeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCCce
Q 043296 400 LDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQ 479 (650)
Q Consensus 400 ~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~ 479 (650)
.|++|+++|+++.+|.|.+||+||++||++++.+|++..|+|+.+.|+||||++..+.+|..||+|.|.|+||.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHhhc
Q 043296 480 INVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTV 559 (650)
Q Consensus 480 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~~L 559 (650)
|+|+|.+|.||+|+|++.+..+|+...++|++. .+||++++++++++++++..+|+..+++.+++|.||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 4599999999999999999999999999999999999999999999
Q ss_pred cchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHhcCC
Q 043296 560 KDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQGD 620 (650)
Q Consensus 560 ~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~e~~ 620 (650)
.+ +..++++++++++...++++++||+++ +.++|++++++|+++++||..|++.++
T Consensus 160 ~~--~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AA--DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 678899999999999999999999965 689999999999999999999887544
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=252.32 Aligned_cols=166 Identities=59% Similarity=0.836 Sum_probs=155.2
Q ss_pred ccceEEEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCC
Q 043296 394 VQDLLLLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPA 473 (650)
Q Consensus 394 ~~~~~~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~ 473 (650)
...+.+.|++|+++|+++.+|.|.+|||||++||++++++|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHH
Q 043296 474 PRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAY 553 (650)
Q Consensus 474 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy 553 (650)
|+|.++|+|+|.+|.||+|+|++.+..||++..++|++. ..||++|+++++++++++..+|++.+++.++||.||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987 8899999999999999999999999999999999999999
Q ss_pred HHHhhcc
Q 043296 554 SMRNTVK 560 (650)
Q Consensus 554 ~~r~~L~ 560 (650)
.+|+.|+
T Consensus 176 ~~~~~l~ 182 (182)
T 3n8e_A 176 DTETKME 182 (182)
T ss_dssp CCSCCCC
T ss_pred HHHHhhC
Confidence 9998763
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.96 E-value=1.5e-29 Score=229.20 Aligned_cols=151 Identities=68% Similarity=1.028 Sum_probs=146.2
Q ss_pred EEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCCc
Q 043296 399 LLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVP 478 (650)
Q Consensus 399 ~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 478 (650)
+.|++|+|+|+++.+|.|.+||+||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHH
Q 043296 479 QINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLE 549 (650)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE 549 (650)
+|+|+|.+|.||+|+|++.+..||++..++|++..+.||++|+++++++++++..+|+..+++.++||.||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987889999999999999999999999999999999875
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.96 E-value=9.5e-30 Score=229.90 Aligned_cols=151 Identities=66% Similarity=1.023 Sum_probs=141.7
Q ss_pred EEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCCc
Q 043296 399 LLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVP 478 (650)
Q Consensus 399 ~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 478 (650)
+.|++|+|+|+++.+|.|.+||+||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHH
Q 043296 479 QINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLE 549 (650)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE 549 (650)
+|+|+|.+|.||+|+|++.++.||+...++|+++.+.||++|+++++++++++..+|+..+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999988889999999999999999999999999999999875
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.96 E-value=1.7e-29 Score=228.01 Aligned_cols=150 Identities=61% Similarity=0.900 Sum_probs=143.2
Q ss_pred EEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCCc
Q 043296 399 LLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVP 478 (650)
Q Consensus 399 ~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 478 (650)
+.|++|+|+|+++.+|.|.+|||||++||++++++|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHH
Q 043296 479 QINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLE 549 (650)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE 549 (650)
+|+|+|.+|.||+|+|++.++.||++..++|++. ..||++|+++++++++++..+|+..+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999987 889999999999999999999999888888888764
No 17
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=3e-28 Score=258.55 Aligned_cols=319 Identities=18% Similarity=0.199 Sum_probs=207.1
Q ss_pred CCcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCChh
Q 043296 6 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPS 85 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (650)
...++|||+||++++++++++|.+.+. ..|...+||... ......+++.+...+|+++++.
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~----- 72 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEA----- 72 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHH-----
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHc-----
Confidence 457999999999999999887665442 234455666321 2223456778888888888641
Q ss_pred hhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHH-------
Q 043296 86 VQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQ------- 158 (650)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q------- 158 (650)
....+.. .+.-+ +...+...... ..++++++... ++..++++++.++.+++|++|. .+.+
T Consensus 73 -~~~~~~v---~~~i~-~~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~ 139 (377)
T 2ych_A 73 -RTRKRYV---VTALS-NLAVILRPIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGE 139 (377)
T ss_dssp -TCCCCEE---EEEEC-GGGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTS
T ss_pred -CCCcceE---EEEec-CCcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcc
Confidence 0001111 01111 11111111111 35777787643 4557888899999999999983 2222
Q ss_pred -------------HHHHHHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEE
Q 043296 159 -------------RQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEV 225 (650)
Q Consensus 159 -------------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v 225 (650)
.+.+++|++.|||++..++.||+|||++|+..... ..+..++|+|+||||||+++++. +.+.
T Consensus 140 ~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~--~~~~~~~vvDiGggttdi~i~~~--g~~~- 214 (377)
T 2ych_A 140 QVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE--EPDRVFLVLDIGAESTSLVLLRG--DKPL- 214 (377)
T ss_dssp EEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT--STTCEEEEEEECSSCEEEEEEET--TEEE-
T ss_pred eeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc--ccCCeEEEEEECCCcEEEEEEEC--CEEE-
Confidence 38899999999999999999999999998654321 24567999999999999999973 4332
Q ss_pred EEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcH
Q 043296 226 KATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITR 305 (650)
Q Consensus 226 ~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr 305 (650)
..++.++||.+||+.|++. ++.+ +.+||++|+.++.........+..++-......++|
T Consensus 215 --~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~ 273 (377)
T 2ych_A 215 --AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSP 273 (377)
T ss_dssp --EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC------------------------
T ss_pred --EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCH
Confidence 3455789999999999873 2222 468999999988643221111111111123457899
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc--CCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCcccccc---------------
Q 043296 306 ARFEELNMDLFRKCMEPVEKCLRDS--KIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKS--------------- 368 (650)
Q Consensus 306 ~~fe~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~--------------- 368 (650)
++|++++++.++++...|++.|+.. +.....++.|+|+||+|++|.|++.|++.|+ .++...
T Consensus 274 ~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~-~~v~~~~P~~~v~~~~~~~~~ 352 (377)
T 2ych_A 274 GRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG-VNLEPVNPWEAVAVDPKRFES 352 (377)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT-SEEEECCGGGGSBCCTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC-CCeEecCchhhcccCcccCCH
Confidence 9999999999999999999999853 5556689999999999999999999999994 443322
Q ss_pred -----CCcchhHHhHHHHHH
Q 043296 369 -----INPDEAVAYGAAVQA 383 (650)
Q Consensus 369 -----~~p~~ava~GAa~~a 383 (650)
.+|..++|.|+|+++
T Consensus 353 ~~l~~~~p~~a~a~Glal~~ 372 (377)
T 2ych_A 353 EQLQEIGPEFAVALGLALRG 372 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHcC
Confidence 134456777887765
No 18
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=8.5e-29 Score=258.24 Aligned_cols=230 Identities=17% Similarity=0.159 Sum_probs=169.9
Q ss_pred EecHHHHHHHHHHHHHHHHHHHhcCCCCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------Cceeeecchh
Q 043296 117 RFSPEEISSMVLTKMKEIAEAYLGHAVKNAV--VTVPAYFNDSQRQATKDAGAIA--------G------LNVMRIINEP 180 (650)
Q Consensus 117 ~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep 180 (650)
.+.++...++++..|+..++...+.+ .++| |+||++|+..||+++++++..+ | ++.+++++||
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 34557777888888877653222333 5699 9999999999999999998775 4 3558899999
Q ss_pred HHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCC--C
Q 043296 181 TAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKK--D 258 (650)
Q Consensus 181 ~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~--~ 258 (650)
+|||++| ++......+..+++|||+||||||++++++.++. .+..+.++.++||.+|++.|.+++.+++ +. .
T Consensus 173 ~AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~----g~~~~ 246 (346)
T 2fsj_A 173 VGAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKET----GFVVP 246 (346)
T ss_dssp HHHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHH----CCCCC
T ss_pred HHHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHh----CCCcC
Confidence 9999988 3221111234789999999999999999987776 4555456789999999999988765554 44 2
Q ss_pred CCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcHHHH-HHHHHHHHhHHHHHHHHHHHhcCCCCCCC
Q 043296 259 ISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARF-EELNMDLFRKCMEPVEKCLRDSKIDKSLV 337 (650)
Q Consensus 259 ~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~f-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i 337 (650)
+. ...+| . ...+.+ .+. .++++++ +++++++++++.+.|++.|+++ .+.+
T Consensus 247 i~---------~~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FD---------LAQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HH---------HHHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CC---------HHHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 21 11122 1 112222 233 3569999 9999999999999999999876 4568
Q ss_pred CeEEEEcCccCcHHHHHHHHhhhCCccc-cccCCcchhHHhHHHHHHH
Q 043296 338 HDIVLVGGSTRIPKVQQLLQDFFNGKEL-CKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 338 ~~V~LvGG~sr~p~v~~~l~~~f~~~~i-~~~~~p~~ava~GAa~~a~ 384 (650)
+.|+|+||+|++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999963222 1267999999999998764
No 19
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.95 E-value=2.2e-27 Score=216.47 Aligned_cols=151 Identities=64% Similarity=0.986 Sum_probs=144.9
Q ss_pred EEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCCCCCCc
Q 043296 399 LLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVP 478 (650)
Q Consensus 399 ~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 478 (650)
+.|++|++||+++.+|.+.+||+||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCceEEEEEeecccCceeeEEEecCCCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHH
Q 043296 479 QINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLE 549 (650)
Q Consensus 479 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE 549 (650)
+|+|+|++|.||+|+|++.+..+|+...++|.+..+.||+++++++++++++|..+|+..+++.++||.||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999877789999999999999999999999999999999875
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=2.4e-26 Score=232.56 Aligned_cols=203 Identities=22% Similarity=0.336 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeecchhHHHHHhcccccccCCCCCce
Q 043296 121 EEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKN 200 (650)
Q Consensus 121 ~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~ 200 (650)
.+....+|+++++.++...+.....+++|+|++|+..+|+.++++++.+|+++..++.||+|++++|+.. .
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~---------~ 140 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN---------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS---------S
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC---------C
Confidence 3556788999999999888888899999999999999999999999999999999999999999988642 2
Q ss_pred EEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHc
Q 043296 201 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTL 280 (650)
Q Consensus 201 vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~l 280 (650)
.+|+|+|||||+++++. .+.+. ......+||.+||+.+.+++. .+ ...++++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999987 44332 346689999999999988862 11 45788999887
Q ss_pred cCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhh
Q 043296 281 SSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFF 360 (650)
Q Consensus 281 s~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f 360 (650)
+ +++++++++.++++++...+.+.++..+ +++.|+|+||++++|.+++.|++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 6 6899999999999999999999998764 4779999999999999999999999
Q ss_pred CCccccccCCcchhHHhHHHHHH
Q 043296 361 NGKELCKSINPDEAVAYGAAVQA 383 (650)
Q Consensus 361 ~~~~i~~~~~p~~ava~GAa~~a 383 (650)
+.++..+.+|++++|+|||++|
T Consensus 251 -~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 -GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp -SSCCBCCSSGGGHHHHHHHTTC
T ss_pred -CCCccccCChHHHHHHHHHhcC
Confidence 5788889999999999999864
No 21
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.94 E-value=4e-26 Score=245.34 Aligned_cols=227 Identities=17% Similarity=0.155 Sum_probs=166.1
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHh-cccccccCCCCCceEEEEEeCCcceEEEEEEEeC
Q 043296 143 VKNAVVTVPAYFNDSQRQATKDAG-AIAGLNVMRIINEPTAAAIA-YGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEE 220 (650)
Q Consensus 143 ~~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~ 220 (650)
...++||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.... ...... +.+|||+|+||||++++. .
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~-~~~~~~-~glVvDiG~gtt~v~~v~--~ 182 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQ-VGERTL-TGTVIDSGDGVTHVIPVA--E 182 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTT-CCSCCC-CEEEEEESSSCEEEEEEE--T
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccc-cCCCCC-eEEEEEcCCCceEEEEeE--C
Confidence 457999999999999999999999 88999999999999999987 42111 111122 679999999999999986 4
Q ss_pred CEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCC----------------
Q 043296 221 GIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTT---------------- 284 (650)
Q Consensus 221 ~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~---------------- 284 (650)
+.. +.......++||+++|+.|.++|.+++ +...... -...+|++|+.++...
T Consensus 183 G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~ 251 (418)
T 1k8k_A 183 GYV-IGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSK 251 (418)
T ss_dssp TEE-CGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGG
T ss_pred CEE-cccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccc
Confidence 432 222235578999999999999986542 1111111 1346788888876432
Q ss_pred -ceEEEEcccccCeeEEEEEcHHHH---HHHHHHHH------hHHHHHHHHHHHhcCC--CCCCCCeEEEEcCccCcHHH
Q 043296 285 -QTTIEIDSLYEGIDFYATITRARF---EELNMDLF------RKCMEPVEKCLRDSKI--DKSLVHDIVLVGGSTRIPKV 352 (650)
Q Consensus 285 -~~~~~i~~~~~~~~~~~~itr~~f---e~~~~~~~------~~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~sr~p~v 352 (650)
...+.++....+.+..+.+++++| |.+|+|.+ ..+.+.|.++|..+.. ....++.|+|+||+|++|.+
T Consensus 252 ~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~ 331 (418)
T 1k8k_A 252 WIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDF 331 (418)
T ss_dssp TCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTH
T ss_pred cceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccH
Confidence 135666655556677889999999 55655542 5688999999987643 34457889999999999999
Q ss_pred HHHHHhhhCC-----------------------ccccccCCcchhHHhHHHHHHH
Q 043296 353 QQLLQDFFNG-----------------------KELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 353 ~~~l~~~f~~-----------------------~~i~~~~~p~~ava~GAa~~a~ 384 (650)
+++|++.++. .++..+.+|..++.+||+++|.
T Consensus 332 ~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 332 GRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 9999876521 1233455788999999999886
No 22
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.93 E-value=7e-25 Score=233.49 Aligned_cols=199 Identities=15% Similarity=0.170 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCCh
Q 043296 157 SQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGG 236 (650)
Q Consensus 157 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG 236 (650)
...+.+.+|++.|||++..++.||.|||++|+.... ++..++|||+||||||+++++ .+.+.. .++.++||
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~----~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG 238 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE----KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGM 238 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH----HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc----ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHH
Confidence 356788999999999999999999999999865432 356799999999999999987 554432 34578999
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCC-----CceEEEEcccccCeeEEEEEcHHHHHHH
Q 043296 237 EDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSST-----TQTTIEIDSLYEGIDFYATITRARFEEL 311 (650)
Q Consensus 237 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~-----~~~~~~i~~~~~~~~~~~~itr~~fe~~ 311 (650)
++||+.|+..+ +. ...+||++|+.++.. ....+.++.... .....++|++|+++
T Consensus 239 ~~it~dIa~~l--------~~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~i 297 (419)
T 4a2a_A 239 KHVIKDVSAVL--------DT-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVI 297 (419)
T ss_dssp HHHHHHHHHHH--------TC-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHH
T ss_pred HHHHHHHHHHH--------CC-----------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHH
Confidence 99999998764 11 256899999998752 345667765432 35679999999999
Q ss_pred HHHHHhHHHHHHHHHHHhcCC------CCCCCCeEEEEcCccCcHHHHHHHHhhhCCcccc--c-----c----------
Q 043296 312 NMDLFRKCMEPVEKCLRDSKI------DKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELC--K-----S---------- 368 (650)
Q Consensus 312 ~~~~~~~i~~~i~~~l~~~~~------~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~--~-----~---------- 368 (650)
++|.++++...|++.|+.++. ....++.|+|+||+|++|.|++.+++.|+ .++. . +
T Consensus 298 i~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g-~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 298 IHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK-SPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT-SCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC-CCeEEEecCCCCchhccCccccc
Confidence 999999999999999999987 34568999999999999999999999994 4432 2 1
Q ss_pred CCcchhHHhHHHHHHHHH
Q 043296 369 INPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 369 ~~p~~ava~GAa~~a~~~ 386 (650)
.+|..++|.|.++++...
T Consensus 377 ~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp TCGGGHHHHHTTCC----
T ss_pred CCchHHHHHHHHHHHhhc
Confidence 488999999999987643
No 23
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.93 E-value=2.5e-25 Score=235.27 Aligned_cols=306 Identities=17% Similarity=0.200 Sum_probs=194.7
Q ss_pred CcEEEEEcCcceeEEEEEECCee-EEEecCCCCcccce-EEEEcCCcEEecHHHHHhHhhCcCchhhhhhHhcCCCCCCh
Q 043296 7 GKAIGIDLGTTYSCVGVWQNDRV-EIIANDQGNRTTPS-YVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDP 84 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~-~ii~~~~g~~~~Ps-~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 84 (650)
...|+||+||+++++++..++.+ .++++--|..+.++ .+.+.....++|.+|.... .. ..+
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~----------- 67 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL----------- 67 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE-----------
T ss_pred CceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cce-----------
Confidence 46899999999999998754433 23333223222221 1122224567888886531 00 000
Q ss_pred hhhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCCCHHHHHHH
Q 043296 85 SVQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHA--VKNAVVTVPAYFNDSQRQAT 162 (650)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~l 162 (650)
.+|+. + ..+.--+....+++|+.. +.++.. ...++||+|++++..+|+++
T Consensus 68 -------~~Pi~---------------~---G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~ 119 (375)
T 2fxu_A 68 -------KYPIE---------------H---GIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKM 119 (375)
T ss_dssp -------ECSEE---------------T---TEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHH
T ss_pred -------ecccc---------------C---CcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHH
Confidence 11211 0 011112233444555442 233332 34599999999999999988
Q ss_pred HHHH-HHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHH
Q 043296 163 KDAG-AIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN 241 (650)
Q Consensus 163 ~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 241 (650)
.+++ +.+|++.+.+++||.|||++++. .+.||||+|+||||++.+. +|. .+.......++||+++|+
T Consensus 120 ~e~~fe~~g~~~~~~~~e~~aaa~a~g~---------~~~lVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~~GG~~lt~ 187 (375)
T 2fxu_A 120 TQIMFETFNVPAMYVAIQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIY--EGY-ALPHAIMRLDLAGRDLTD 187 (375)
T ss_dssp HHHHHHTTCCSEEEEEEHHHHHHHHTTC---------SSEEEEEECSSCEEEEEEE--TTE-ECGGGCEEESCCHHHHHH
T ss_pred HHHHHHhcCcceEEEccchheeeeecCC---------CeEEEEEcCCCceEEeEeE--CCE-EeccceEEeccCHHHHHH
Confidence 8764 88899999999999999999864 2579999999999998764 553 222223457899999999
Q ss_pred HHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHcc----------------CCCceEEEEcccccCeeEEEEEcH
Q 043296 242 RLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLS----------------STTQTTIEIDSLYEGIDFYATITR 305 (650)
Q Consensus 242 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls----------------~~~~~~~~i~~~~~~~~~~~~itr 305 (650)
.|.+++..+ .+....... ...+|++|+.++ ......+.++ ++. .+.|++
T Consensus 188 ~l~~~l~~~---~~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg~--~i~i~~ 252 (375)
T 2fxu_A 188 YLMKILTER---GYSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DGQ--VITIGN 252 (375)
T ss_dssp HHHHHHHHH---TCCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC--EEEEST
T ss_pred HHHHHHHhc---CCCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CCC--EEEECh
Confidence 999998764 122211111 233455555443 2223344443 232 467888
Q ss_pred HHH---HHHHHHH-----HhHHHHHHHHHHHhcCC--CCCCCCeEEEEcCccCcHHHHHHHHhhhCC-------cccccc
Q 043296 306 ARF---EELNMDL-----FRKCMEPVEKCLRDSKI--DKSLVHDIVLVGGSTRIPKVQQLLQDFFNG-------KELCKS 368 (650)
Q Consensus 306 ~~f---e~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~-------~~i~~~ 368 (650)
+.| |.+++|. ...+.+.|.++|..+.. ....++.|+|+||+|++|.++++|.+.++. .++..+
T Consensus 253 erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~ 332 (375)
T 2fxu_A 253 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332 (375)
T ss_dssp HHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECC
T ss_pred hheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcC
Confidence 888 4444443 25578888888886532 233467899999999999999999988731 345567
Q ss_pred CCcchhHHhHHHHHHH
Q 043296 369 INPDEAVAYGAAVQAA 384 (650)
Q Consensus 369 ~~p~~ava~GAa~~a~ 384 (650)
.+|..++++||+++|.
T Consensus 333 ~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 333 PERKYSVWIGGSILAS 348 (375)
T ss_dssp TTTTSHHHHHHHHHHH
T ss_pred CCCCccEEcchHHhhC
Confidence 7999999999999987
No 24
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.87 E-value=1.6e-22 Score=209.16 Aligned_cols=227 Identities=15% Similarity=0.201 Sum_probs=149.9
Q ss_pred EecHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeeecch
Q 043296 117 RFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAY-FNDS--QR--QATKDA------------GAIAGLNVMRIINE 179 (650)
Q Consensus 117 ~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~E 179 (650)
.+++..+++.+ ..|+. +.. .+.+ .++|+++|.. |... || +++.+- .+.+++..+.++.|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 56777777654 44443 211 1222 3689999987 6541 22 222221 23445677899999
Q ss_pred hHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCC
Q 043296 180 PTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDI 259 (650)
Q Consensus 180 p~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~ 259 (650)
|.||+++|.... .++..++|+|+||||||+++++ ++.+.+....++.++||.+||+.|.+++.+ + +.++
T Consensus 149 ~~aa~~~~~~~~----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~----~-~~~i 217 (320)
T 2zgy_A 149 SIPAGYEVLQEL----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL----A-RTKG 217 (320)
T ss_dssp SHHHHHHHHHHS----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC----C-SBGG
T ss_pred cHHHHHhhhccc----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH----c-CCCC
Confidence 999999886322 2467899999999999999998 444455556677899999999999998753 1 2222
Q ss_pred CccHHHHHHHHHHHHHH-HHHccCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCC
Q 043296 260 SGNARALRRLRTACERA-KRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVH 338 (650)
Q Consensus 260 ~~~~~~~~~L~~~~e~~-K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 338 (650)
. . ..+|++ |.. . ... ......+. .-+++++.+++++.++++.+.|.+.+++. .+++
T Consensus 218 ~--~-------~~ae~~lk~~-~--~~~--~~~~~i~~-----~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~ 274 (320)
T 2zgy_A 218 S--S-------YLADDIIIHR-K--DNN--YLKQRIND-----ENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYT 274 (320)
T ss_dssp G--H-------HHHHHHHHTT-T--CHH--HHHHHSSS-----SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCC
T ss_pred C--H-------HHHHHHHHHh-h--hhh--cccceecC-----chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCC
Confidence 1 1 234444 322 0 000 00000000 11346667777788888877777777652 4689
Q ss_pred eEEEEcCccCcHHHHHHHHhhhCCc--cccccCCcchhHHhHHHHHH
Q 043296 339 DIVLVGGSTRIPKVQQLLQDFFNGK--ELCKSINPDEAVAYGAAVQA 383 (650)
Q Consensus 339 ~V~LvGG~sr~p~v~~~l~~~f~~~--~i~~~~~p~~ava~GAa~~a 383 (650)
.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||++++
T Consensus 275 ~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 275 HVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred eEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99999999987 999999999532 57778899999999999875
No 25
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.86 E-value=8.9e-22 Score=174.32 Aligned_cols=119 Identities=62% Similarity=0.949 Sum_probs=109.3
Q ss_pred ccceEEEeeccccceEEeeCCEEEEEEeCCCCCCccceeeeeecccCcceEEEEeeccccccccCCcceeEEEecCCCCC
Q 043296 394 VQDLLLLDVTPLSLGIETAGGVMTTLIPRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPA 473 (650)
Q Consensus 394 ~~~~~~~~~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~ 473 (650)
.+++.+.|++|+++|+++.++.+.+||+||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEcCCceEEEEEeecccCceeeEEEecC
Q 043296 474 PRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITND 512 (650)
Q Consensus 474 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~ 512 (650)
|+|.++|+|+|++|.||+|+|++.+..||++.+++|+++
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999999875
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.79 E-value=3.6e-20 Score=196.72 Aligned_cols=214 Identities=18% Similarity=0.205 Sum_probs=91.3
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCE
Q 043296 144 KNAVVTVPAYFNDSQRQATKDAG-AIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGI 222 (650)
Q Consensus 144 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~ 222 (650)
..++||+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++. .+.+|+|+|+|||+++.+. ++.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~---------~~~lVVDiG~g~T~v~pv~--~G~ 173 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL---------LTGVVVDSGDGVTHICPVY--EGF 173 (394)
T ss_dssp ----------------------------------------------------------CCEEEECSSCEEEECEE--TTE
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC---------ceEEEEEcCCCceEeeeeE--CCE
Confidence 45899999999999999998865 78899999999999999998864 2459999999999998775 343
Q ss_pred EEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCC----------------ce
Q 043296 223 FEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTT----------------QT 286 (650)
Q Consensus 223 ~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~----------------~~ 286 (650)
. +.......++||+++|+.|.++|..+ .+....... ...+|.+|+.++... ..
T Consensus 174 ~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~ 242 (394)
T 1k8k_B 174 S-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVE 242 (394)
T ss_dssp E-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCE
T ss_pred E-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCce
Confidence 2 11112335899999999999998653 122211112 234566666654321 12
Q ss_pred EEEEcccccCeeEEEEEcHHHHH---HHHHHH-----HhHHHHHHHHHHHhcCCC--CCCCCeEEEEcCccCcHHHHHHH
Q 043296 287 TIEIDSLYEGIDFYATITRARFE---ELNMDL-----FRKCMEPVEKCLRDSKID--KSLVHDIVLVGGSTRIPKVQQLL 356 (650)
Q Consensus 287 ~~~i~~~~~~~~~~~~itr~~fe---~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~v~~~l 356 (650)
.+.++ ++. .+.|+++.|+ .+++|. ...+.+.|.++|..+..+ ....+.|+|+||+|++|.+.++|
T Consensus 243 ~~~lp---dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl 317 (394)
T 1k8k_B 243 SYTLP---DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRL 317 (394)
T ss_dssp EEECT---TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHH
T ss_pred EEECC---CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHH
Confidence 22222 232 4677888773 333332 245778888888876432 23467899999999999999999
Q ss_pred HhhhCC------------------ccccccCCcchhHHhHHHHHHH
Q 043296 357 QDFFNG------------------KELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 357 ~~~f~~------------------~~i~~~~~p~~ava~GAa~~a~ 384 (650)
.+.+.. .++..+.+|..++.+|++++|.
T Consensus 318 ~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 318 ERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 887631 1233356788999999999886
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.78 E-value=3.3e-18 Score=172.96 Aligned_cols=186 Identities=17% Similarity=0.180 Sum_probs=124.1
Q ss_pred HcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHH
Q 043296 168 IAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHF 247 (650)
Q Consensus 168 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l 247 (650)
.++...+..++||+|+++++..... ....|+|+|||+++++++. .++.++.....+.+..|+.+|++.+++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~~------~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l 140 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFIIP------ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKII 140 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHST------TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhCC------CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHh
Confidence 3566778999999999988765432 2357899999999999885 56788888888999999999999999887
Q ss_pred HHHHHhhcCCCCCccHHHHHHHHHHHHHHHHH--ccCCCceEEEEcccccCeeE-EEEEcHHHHHHHHHHHHhHHHHHHH
Q 043296 248 VAEFRRKHKKDISGNARALRRLRTACERAKRT--LSSTTQTTIEIDSLYEGIDF-YATITRARFEELNMDLFRKCMEPVE 324 (650)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~--ls~~~~~~~~i~~~~~~~~~-~~~itr~~fe~~~~~~~~~i~~~i~ 324 (650)
.-.+..... + +..++.. ++..... +.. .++ ...-.....++++..+.+.+.+.+.
T Consensus 141 ~~~~~~~~~------------~---~~~a~~~~~i~~~~~~------f~~-s~~~~~~~~~~~~~di~a~~~~~v~~~l~ 198 (276)
T 4ehu_A 141 EVDVSELGS------------I---SMNSQNEVSISSTCTV------FAE-SEVISHLSENAKIEDIVAGIHTSVAKRVS 198 (276)
T ss_dssp TCCGGGHHH------------H---HTTCSSCCCCCCCSHH------HHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccChhhhHH------------H---HhcCCCCCCcCCccch------hhh-hHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 433221100 0 0000000 0000000 000 000 0000011135566666666666555
Q ss_pred HHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHc
Q 043296 325 KCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 325 ~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
...... ..++.|+|+||.+++|.|++.|++.| +.++..+.||++++|+|||++|....
T Consensus 199 ~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 199 SLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 544433 34678999999999999999999999 68899999999999999999997654
No 28
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.75 E-value=3.1e-18 Score=147.44 Aligned_cols=111 Identities=50% Similarity=0.903 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHH
Q 043296 537 QVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKM 616 (650)
Q Consensus 537 ~~~~~~~akN~LE~~iy~~r~~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~ 616 (650)
.++++.++||.||+|||.++..|.++.+..+++++++++|...++++.+||+++.+++.++|+.++++|++++.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999876688899999999999999999999999877899999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 043296 617 YQGDGGDVPMGGGYGSSGSGGSGAGAGPKIEEVD 650 (650)
Q Consensus 617 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (650)
+++++++. .||++++ +.+++++.||+|||||
T Consensus 83 y~~~~~~~--~~~~~~~-~~~~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAGGPG--PGGFGAQ-GPKGGSGSGPTIEEVD 113 (113)
T ss_dssp HHC-------------------------------
T ss_pred HHhccCCC--CCCCCCC-CCCCCCCCCCCCCCCC
Confidence 98754321 2233322 2223346789999997
No 29
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.71 E-value=3.7e-17 Score=170.20 Aligned_cols=206 Identities=14% Similarity=0.175 Sum_probs=138.4
Q ss_pred CcEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeeecchhHHHHHhcccccccCC--CCCceEEEEEeCC
Q 043296 144 KNAVVTVPAYFNDSQR-QATKDAGAIAGL------------NVMRIINEPTAAAIAYGLDKKASR--TGEKNVLIFDLGG 208 (650)
Q Consensus 144 ~~~VitVPa~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~~--~~~~~vlV~D~Gg 208 (650)
..+++.+|..+...+| +++++++..++- ..+.++.||.||++++..+..... .++..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3689999999888887 589998875542 467899999999999876542100 0367899999999
Q ss_pred cceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEE
Q 043296 209 GTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTI 288 (650)
Q Consensus 209 gT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~ 288 (650)
||||++++. ++.+. ....+...+||..+++.+.+++.+++. +..+. . ...++.+. +
T Consensus 194 gTtd~~v~~--~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~---------~ 249 (355)
T 3js6_A 194 GTTIIDTYQ--NMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE---------Y 249 (355)
T ss_dssp SCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC----------
T ss_pred CcEEEEEEc--CCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc---------c
Confidence 999999983 44331 112223579999999999999876532 22221 1 11111111 0
Q ss_pred EEcccccCee--EEEEEcHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHH--HHHHHHhhhCCcc
Q 043296 289 EIDSLYEGID--FYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPK--VQQLLQDFFNGKE 364 (650)
Q Consensus 289 ~i~~~~~~~~--~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~--v~~~l~~~f~~~~ 364 (650)
.. .+.+ -...+ .+.+++.++++++++...|++.+.+ ++.++.|+|+||++.++. |++.|++.|+..
T Consensus 250 ~~----~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 250 KQ----CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred cc----ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 00 0000 01122 2356677777778888877777754 456799999999999998 899999988432
Q ss_pred ccccCCcchhHHhHHHHHHHHHc
Q 043296 365 LCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 365 i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
.||..|+|+|+..++..+.
T Consensus 320 ----~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHH
Confidence 7999999999999988765
No 30
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.63 E-value=3.1e-16 Score=136.17 Aligned_cols=108 Identities=44% Similarity=0.770 Sum_probs=74.1
Q ss_pred HHHHHHHHHhHHHHHHHHHhhccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHh
Q 043296 538 VKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 617 (650)
Q Consensus 538 ~~~~~~akN~LE~~iy~~r~~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~ 617 (650)
++++.++||.||+|||.++..|.++.+...++++++++|...++++.+||+++.+++.++|+.++++|++++.||..|++
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578899999999999999997655778899999999999999999999876667999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 043296 618 QGDGGDVPMGGGYGSSGSGGSGAGAGPKIEEVD 650 (650)
Q Consensus 618 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (650)
+++ ++. +| | +++ .++++++.+|+|||||
T Consensus 93 ~~~-~~~-~~-~-~~~-~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 93 QSA-GGA-PP-G-AAP-GGAAGGAGGPTIEEVD 120 (120)
T ss_dssp CC-------------------------------
T ss_pred Hhc-cCC-CC-C-CCC-CCCCCCCCCCCCCCCC
Confidence 644 222 22 2 111 2223445689999997
No 31
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.63 E-value=2e-16 Score=136.36 Aligned_cols=110 Identities=48% Similarity=0.807 Sum_probs=71.6
Q ss_pred HHHHHHhHHHHHHHHHhhccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHhcCC
Q 043296 541 KVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQGD 620 (650)
Q Consensus 541 ~~~akN~LE~~iy~~r~~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~e~~ 620 (650)
+.++||.||+|||.++..|.++.+...++++++++|...++++.+||+++.+++.++|+.++++|++++.||..|+++++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999997545788999999999999999999999755446889999999999999999999999754
Q ss_pred CCCC-CCCCCCCCC-CCCCCCCCCCCCCCCCC
Q 043296 621 GGDV-PMGGGYGSS-GSGGSGAGAGPKIEEVD 650 (650)
Q Consensus 621 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 650 (650)
++.. ++.||++++ ++.+++++++|+|||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~d 113 (113)
T 1ud0_A 82 GGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 113 (113)
T ss_dssp CCCCCC--------------------------
T ss_pred cCCCCCCCCCCCCcccCCCCCCCCCCCcccCC
Confidence 3211 111222211 22233446789999997
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.60 E-value=3.1e-16 Score=161.95 Aligned_cols=205 Identities=14% Similarity=0.171 Sum_probs=139.8
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeeecchhHHHHHhcccccccCCCCCceEEEEEeC
Q 043296 144 KNAVVTVPAYFND--SQRQATKDAGAIA--------G------LNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLG 207 (650)
Q Consensus 144 ~~~VitVPa~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~G 207 (650)
..+++++|..+-. .+|+.+++....- | +..+.+++||.+|.+.+. .. .+...++|+|+|
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~---~~~~~v~vvDiG 180 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--EN---FKNKNVAVIDFG 180 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CC---CTTCEEEEEEEC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hh---hccCCEEEEEeC
Confidence 4689999977664 3677787766521 1 134678899998887652 11 256789999999
Q ss_pred CcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceE
Q 043296 208 GGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTT 287 (650)
Q Consensus 208 ggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~ 287 (650)
|||||++++. .+.+ +....+...+||.++++.|.+++.+ .+++..+... .++++|+. . . ..
T Consensus 181 ggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~~---------~~e~i~~~-g-~--~~ 241 (329)
T 4apw_A 181 GLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITNE---------QAESALNN-G-Y--MK 241 (329)
T ss_dssp SSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTSB---------TTTTCSSS-C-S--SC
T ss_pred CCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCHH---------HHHHHHhc-C-C--cc
Confidence 9999999998 4433 2222234679999999999887644 0455443321 23444432 1 1 00
Q ss_pred EEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccc
Q 043296 288 IEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCK 367 (650)
Q Consensus 288 ~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~ 367 (650)
.+.+. ..+..+++++.++++++++.+.|++. +.++..++.|+|+||++.+ +.+.|++.|+ .++..
T Consensus 242 -------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v 306 (329)
T 4apw_A 242 -------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSII 306 (329)
T ss_dssp -------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEEC
T ss_pred -------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcC-CCCEe
Confidence 01111 13456777888878787777777665 3455568999999999988 6699999994 46777
Q ss_pred cCCcchhHHhHHHHHHHHHc
Q 043296 368 SINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 368 ~~~p~~ava~GAa~~a~~~~ 387 (650)
..||..|+|+|+..++....
T Consensus 307 ~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp CSSGGGHHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhhhh
Confidence 88999999999999887554
No 33
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1.1e-13 Score=148.66 Aligned_cols=179 Identities=14% Similarity=0.131 Sum_probs=118.3
Q ss_pred CcEEEEEcCcceeEEEEEECCeeEEEecCCCCcccceEEEEcC----CcEEecHHHHHhHhhCcCchhhhhhHhcCCCCC
Q 043296 7 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTD----TERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFS 82 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~----~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~ 82 (650)
...|+||+||.++++++...+.+. ..+||+|+... ...+||.++.... +.+
T Consensus 23 ~~~iVID~GS~~~kaG~ag~~~P~--------~v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~-------------- 77 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYSGSDFPQ--------SILPSVYGKYTADEGNKKIFSEQSIGIP---RKD-------------- 77 (498)
T ss_dssp BSCEEEECCSSEEEEEETTCSSCS--------EEEESEEEEESSCSSCCEECCTTGGGSC---CTT--------------
T ss_pred CCeEEEECCCcEEEEEECCCCCee--------eecCceeEEeccCCCccEEEecHHHhcC---cCc--------------
Confidence 357999999999999987554332 24799998853 2467776532110 000
Q ss_pred ChhhhhhcccCCeEEEeCCCCCceEEEEECCcceEecHHHHHHHHHHHHHHHHHHHhcCC--CC-cEEEEeCCCCCHHHH
Q 043296 83 DPSVQSDMRHWPFKVASGPGDKPMIAVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHA--VK-NAVVTVPAYFNDSQR 159 (650)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~~-~~VitVPa~~~~~qr 159 (650)
..-.+|++ ...+.--+....+++|+... .++.. -. .+++|.|.......|
T Consensus 78 ------l~l~~Pi~------------------~GvI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~R 130 (498)
T 3qb0_A 78 ------YELKPIIE------------------NGLVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENR 130 (498)
T ss_dssp ------EEEEESEE------------------TTEESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHH
T ss_pred ------eEEeccCc------------------CCEEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHH
Confidence 00011111 11233334455566665532 23322 23 589999999999999
Q ss_pred HHHHHHH-HHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhH
Q 043296 160 QATKDAG-AIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 238 (650)
Q Consensus 160 ~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 238 (650)
+.|.+.+ +.+|++.+.++.+|.+|+++++.. +-||+|+|+|+|+++.+. .|.. +........+||++
T Consensus 131 e~~~eilFE~f~vpav~l~~~~vlalya~G~~---------tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~ 198 (498)
T 3qb0_A 131 KKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP---------NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKF 198 (498)
T ss_dssp HHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS---------SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHH
T ss_pred HHHHHHHHhhcCCCeEeecchHHHHHHHcCCC---------eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHH
Confidence 9999865 789999999999999999887641 249999999999999885 3322 11111225799999
Q ss_pred HHHHHHHHHHH
Q 043296 239 FDNRLVNHFVA 249 (650)
Q Consensus 239 ~d~~l~~~l~~ 249 (650)
+|+.|.++|.+
T Consensus 199 lt~~L~~lL~~ 209 (498)
T 3qb0_A 199 INHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999998854
No 34
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.50 E-value=3.5e-14 Score=151.07 Aligned_cols=243 Identities=19% Similarity=0.151 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHhcccccccCCCCC
Q 043296 122 EISSMVLTKMKEIAEAYLGHA--VKNAVVTVPAYFNDSQRQATKDAG-AIAGLNVMRIINEPTAAAIAYGLDKKASRTGE 198 (650)
Q Consensus 122 ~v~~~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~ 198 (650)
+....+++|+.. +.++.. -..+++|.|...+...|+.+.+.+ +..|++.+.++.+|.+|+++.+..... ....
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~-~~~~ 178 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV-TDRS 178 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT-CSCC
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc-cCCC
Confidence 344455555442 233322 347899999999999999999887 789999999999999999887743211 0113
Q ss_pred ceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHH
Q 043296 199 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKR 278 (650)
Q Consensus 199 ~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 278 (650)
.+-||+|+|+|+|+++.+. .+..- ........+||+++|+.|.++|..+... .. =...++.+|+
T Consensus 179 ~tglVVDiG~g~T~v~PV~--~G~~l-~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~---------~~~~~~~IKe 242 (427)
T 3dwl_A 179 LTGTVVDSGDGVTHIIPVA--EGYVI-GSSIKTMPLAGRDVTYFVQSLLRDRNEP----DS---------SLKTAERIKE 242 (427)
T ss_dssp CCEEEEEESSSCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHH
T ss_pred ceEEEEECCCCceEEEEEE--CCEEe-hhhheeccccHHHHHHHHHHHHHHcCCC----ch---------hHHHHHHHHH
Confidence 4679999999999999984 33221 1111124799999999999887554321 00 0235666777
Q ss_pred HccCCCce-----------EEEEcc--c--ccCeeEEEEEcHHHH---HHHHHHH------HhHHHHHHHHHHHhcCCC-
Q 043296 279 TLSSTTQT-----------TIEIDS--L--YEGIDFYATITRARF---EELNMDL------FRKCMEPVEKCLRDSKID- 333 (650)
Q Consensus 279 ~ls~~~~~-----------~~~i~~--~--~~~~~~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~~~- 333 (650)
.++..... ...+.. + .++....+.|..+.| |-+++|- ...+.+.|.++|.++..+
T Consensus 243 ~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dl 322 (427)
T 3dwl_A 243 ECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDV 322 (427)
T ss_dssp HHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHH
T ss_pred hcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHH
Confidence 66542110 000110 1 233334567777776 3445542 245777888888765422
Q ss_pred -CCCCCeEEEEcCccCcHHHHHHHHhhhC-------------------C--ccccccCCcchhHHhHHHHHHH
Q 043296 334 -KSLVHDIVLVGGSTRIPKVQQLLQDFFN-------------------G--KELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 334 -~~~i~~V~LvGG~sr~p~v~~~l~~~f~-------------------~--~~i~~~~~p~~ava~GAa~~a~ 384 (650)
..-...|+|+||+|.+|.+.++|.+.+. . .++..+.++..++=+|++++|.
T Consensus 323 r~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 323 RKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 1234569999999999999999887541 1 1334455777899999999986
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.26 E-value=3.1e-10 Score=127.12 Aligned_cols=117 Identities=17% Similarity=0.242 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCC-----cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeeecchhHHHHHhcccccc
Q 043296 120 PEEISSMVLTKMKEIA-EAYLGHAVK-----NAVVTVPAYFNDSQRQATKDA-GAIAGLNVMRIINEPTAAAIAYGLDKK 192 (650)
Q Consensus 120 ~~~v~~~~L~~l~~~a-~~~~~~~~~-----~~VitVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaal~y~~~~~ 192 (650)
..+....+ ..|.+++ ...++.... .+++|.|..++...|+.|.+. .+..|+..+.++.++.+|+++++..
T Consensus 170 ~~~~wdd~-e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLADI-EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHHH-HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHHH-HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 34444443 3444444 345665443 389999999999999988775 4677999999999999999887643
Q ss_pred cCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHH
Q 043296 193 ASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVA 249 (650)
Q Consensus 193 ~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 249 (650)
+-+|||+|.++|.|+-|. +|.. +........+||+++++.|.++|..
T Consensus 247 -------tglVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 247 -------STCIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp -------EEEEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred -------ceEEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 459999999999998775 3211 0111112479999999999888754
No 36
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.22 E-value=8.1e-12 Score=130.77 Aligned_cols=197 Identities=20% Similarity=0.203 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHc-CC--ceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCC
Q 043296 156 DSQRQATKDAGAIA-GL--NVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 232 (650)
Q Consensus 156 ~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 232 (650)
..+-+.+.+|.+.+ |+ .+-. .||.||+++.+.+.. .+..++++|+||||||++++.-..- .+....
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE----~eLGvaiIDmGGGTTd~sVf~~G~l-----v~a~~i 435 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG----TTRPLAILDLGAGSTDASIINPKGD-----IIATHL 435 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECTTCC-----EEEEEE
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCcE-----EEEEEe
Confidence 44578899999999 99 6666 999999999877665 4678999999999999999975442 222235
Q ss_pred CCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCC----------ceEEEE--cccccC---e
Q 043296 233 HLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTT----------QTTIEI--DSLYEG---I 297 (650)
Q Consensus 233 ~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~----------~~~~~i--~~~~~~---~ 297 (650)
..||++++..|..-|. .. + +..||++|+ +.... ...+.+ +.+... .
T Consensus 436 p~gG~~VT~DIA~~Lg--------t~---d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELG--------LE---D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHT--------CC---C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhC--------CC---C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 7899999999977651 11 0 357999999 54311 123444 222110 1
Q ss_pred ------eEEEEEcHHH--HHHHHHHHHhHHHHH--HHHHHHhcCC-----CCCCCCeEEEEcCccCcHHHHHHHHhhhCC
Q 043296 298 ------DFYATITRAR--FEELNMDLFRKCMEP--VEKCLRDSKI-----DKSLVHDIVLVGGSTRIPKVQQLLQDFFNG 362 (650)
Q Consensus 298 ------~~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~ 362 (650)
+.-..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++..+.|+.
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 112355 666 777 65555554443 3334555432 234679999999999999999999999954
Q ss_pred cc-------ccccCCcchhHHhHHHHHHH
Q 043296 363 KE-------LCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 363 ~~-------i~~~~~p~~ava~GAa~~a~ 384 (650)
-+ ......|..|+|.|.+++.+
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 12 22245899999999998765
No 37
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.20 E-value=1.4e-11 Score=129.50 Aligned_cols=196 Identities=20% Similarity=0.180 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHc-CC--ceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCC
Q 043296 157 SQRQATKDAGAIA-GL--NVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTH 233 (650)
Q Consensus 157 ~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 233 (650)
.+-+.+.+|.+.+ || .+-. .||.||+++.+.+.. .+..++++|+||||||++++.-..- .+.....
T Consensus 370 ~~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE----~elGvaiIDmGgGTTd~sVf~~g~l-----v~a~~ip 438 (607)
T 1nbw_A 370 LQMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG----CAAPLAILDLGAGSTDAAIVNAEGQ-----ITAVHLA 438 (607)
T ss_dssp CCSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT----CCSSEEEEEECSSEEEEEEECSSSC-----EEEEEEE
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----CcCCeEEEEeCCCcceEEEEcCCcE-----EEEEEec
Confidence 3467788899999 99 5555 999999999877665 4678999999999999999975552 2222357
Q ss_pred CChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCC----------ceEEEE--cccccC---e-
Q 043296 234 LGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTT----------QTTIEI--DSLYEG---I- 297 (650)
Q Consensus 234 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~----------~~~~~i--~~~~~~---~- 297 (650)
.||++++..|..-|. .. + +..||++|+ +.... ...+.+ +.+... .
T Consensus 439 ~gG~~VT~DIA~~Lg--------~~---d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~ 499 (607)
T 1nbw_A 439 GAGNMVSLLIKTELG--------LE---D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKV 499 (607)
T ss_dssp CCHHHHHHHHHHHHT--------CS---C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCE
T ss_pred cchHHHHHHHHHHhC--------CC---C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeee
Confidence 899999999977651 11 0 357899998 54311 123444 222110 1
Q ss_pred -----eEEEEEcHHH--HHHHHHHHHhHHHHH--HHHHHHhcCCC-----CCCCCeEEEEcCccCcHHHHHHHHhhhCCc
Q 043296 298 -----DFYATITRAR--FEELNMDLFRKCMEP--VEKCLRDSKID-----KSLVHDIVLVGGSTRIPKVQQLLQDFFNGK 363 (650)
Q Consensus 298 -----~~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~ 363 (650)
+.-..| +.+ +|+ ++-+-+++.+. +..+|+..+.. ..+|..|+|+||+|.++.+.++..+.|+.-
T Consensus 500 ~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~ 577 (607)
T 1nbw_A 500 VYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY 577 (607)
T ss_dssp EEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 112355 666 777 65555555543 45557776653 236699999999999999999999999531
Q ss_pred c-------ccccCCcchhHHhHHHHHHH
Q 043296 364 E-------LCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 364 ~-------i~~~~~p~~ava~GAa~~a~ 384 (650)
+ ......|..|+|.|.+++.+
T Consensus 578 ~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 578 GVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp TCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred CeEEecCCccccCCchHHHHHHHHHhhh
Confidence 2 22245899999999998753
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.81 E-value=2e-07 Score=92.89 Aligned_cols=172 Identities=18% Similarity=0.215 Sum_probs=99.6
Q ss_pred eeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHh
Q 043296 174 MRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRR 253 (650)
Q Consensus 174 ~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~ 253 (650)
..+++|++|.+........ +.-.|+|+||+++.+..+ .++.+.-......+..|+-.| .+++...+
T Consensus 77 ~~~v~Ei~ah~~ga~~~~~------~~~~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~----le~~a~~l-- 142 (270)
T 1hux_A 77 DKQMSELSCHAMGASFIWP------NVHTVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRF----LDVMANIL-- 142 (270)
T ss_dssp SEEECHHHHHHHHHHHHCT------TCCEEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHH----HHHHHHHH--
T ss_pred CCCcccHHHHHHHHHHhCC------CCCEEEEECCCceEEEEE--eCCceeeeccccccchhhHHH----HHHHHHHh--
Confidence 4679999999865422221 111589999998888777 466554334444344444333 33333333
Q ss_pred hcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCeeEEEEEcHHHH----------HHHHHHHHhHHHHHH
Q 043296 254 KHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARF----------EELNMDLFRKCMEPV 323 (650)
Q Consensus 254 ~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~f----------e~~~~~~~~~i~~~i 323 (650)
+.++. .|-+.+.+.+..+.....+. .+.+.++ ++++..+++.+...+
T Consensus 143 --g~~~~-------el~~la~~~~~p~~~~~~c~--------------vfa~s~v~~l~~~g~~~~di~~av~e~Va~~i 199 (270)
T 1hux_A 143 --EVKVS-------DLAELGAKSTKRVAISSTCT--------------VFAESEVISQLSKGTDKIDIIAGIHRSVASRV 199 (270)
T ss_dssp --TCCTT-------THHHHHTTCCSCCCCCCCSH--------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred --CCCHH-------HHHHHHhhCCCCCCcccccc--------------hhHhHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Confidence 23321 01111111110000000000 1122222 445555555555555
Q ss_pred HHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHc
Q 043296 324 EKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 324 ~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
.+.++..+. .+.|+++||.+++|.+++.+.+.+ +.++..+.+++.+.|+|||++|....
T Consensus 200 ~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 200 IGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp HHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHHT
T ss_pred HHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHhh
Confidence 555554321 367999999999999999999999 67888888888899999999997643
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.27 E-value=3.5e-05 Score=76.52 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=41.4
Q ss_pred CCeEEEEcC-ccCcHHHHHHHHhhh--CCccccccCCcchhHHhHHHHHH
Q 043296 337 VHDIVLVGG-STRIPKVQQLLQDFF--NGKELCKSINPDEAVAYGAAVQA 383 (650)
Q Consensus 337 i~~V~LvGG-~sr~p~v~~~l~~~f--~~~~i~~~~~p~~ava~GAa~~a 383 (650)
++.|+++|| .+..|.+++.|++.+ .+.++..+.+|..+.|+|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 457999999 899999999999974 46788889999999999999863
No 40
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.92 E-value=2.8e-05 Score=84.48 Aligned_cols=121 Identities=17% Similarity=0.280 Sum_probs=88.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCE
Q 043296 144 KNAVVTVPAYFNDSQRQATKDAG-AIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGI 222 (650)
Q Consensus 144 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~ 222 (650)
..+++|.|..++...|+.|.+.+ +..|++.+.++.+|.+|+++++. ..+-||+|+|+|+|+++.+. .|.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl--------~ttGLVVDiG~g~T~VvPV~--eG~ 291 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI--------STSTCVVNIGAAETRIACVD--EGT 291 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC--------SSCEEEEEECSSCEEEEEEE--TTE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC--------CCceEEEcCCCceEEEEEEe--CCE
Confidence 46899999999999999998887 46899999999999999988764 23469999999999999885 332
Q ss_pred EEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcC---CCCCccHHHHHHHHHHHHHHHHHccCC
Q 043296 223 FEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHK---KDISGNARALRRLRTACERAKRTLSST 283 (650)
Q Consensus 223 ~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~---~~~~~~~~~~~~L~~~~e~~K~~ls~~ 283 (650)
. +........+||+++|+.|.++|..+ .+. ..+. ... =...++.+|+.++.-
T Consensus 292 v-l~~ai~rL~iGG~dLT~yL~kLL~~r---gypy~~~~f~--t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 292 V-LEHSAITLDYGGDDITRLFALFLLQS---DFPLQDWKID--SKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp E-CGGGCEEESCCHHHHHHHHHHHHHHT---TCSCCSCCTT--SHH---HHHHHHHHHHHHCCC
T ss_pred E-EhhheeeecchHHHHHHHHHHHHHHc---CCCccccCCC--Ccc---hHHHHHHHHHheEEE
Confidence 1 11111225899999999999988653 111 1111 111 134678889998776
No 41
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.16 E-value=0.0039 Score=63.54 Aligned_cols=70 Identities=14% Similarity=0.060 Sum_probs=52.3
Q ss_pred HHHHHHHHhHHHHHHHHHH----HhcCCCCCCCCeEEEEcC-ccCcHHHHHHHHhhh-----CCccccccCCcchhHHhH
Q 043296 309 EELNMDLFRKCMEPVEKCL----RDSKIDKSLVHDIVLVGG-STRIPKVQQLLQDFF-----NGKELCKSINPDEAVAYG 378 (650)
Q Consensus 309 e~~~~~~~~~i~~~i~~~l----~~~~~~~~~i~~V~LvGG-~sr~p~v~~~l~~~f-----~~~~i~~~~~p~~ava~G 378 (650)
|+++..++..+...|-... +..+ ++.|+++|| .+..|.+++.|++.+ ++.++..+.+|..+-|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 4555556555555544432 3333 456999999 999999999999986 346788888999999999
Q ss_pred HHHHH
Q 043296 379 AAVQA 383 (650)
Q Consensus 379 Aa~~a 383 (650)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 42
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.89 E-value=0.073 Score=53.88 Aligned_cols=48 Identities=21% Similarity=0.194 Sum_probs=33.8
Q ss_pred CCeEEEEcCccCc-HHHHHHHHhhh---------CCccccccCCcchhHHhHHHHHHH
Q 043296 337 VHDIVLVGGSTRI-PKVQQLLQDFF---------NGKELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 337 i~~V~LvGG~sr~-p~v~~~l~~~f---------~~~~i~~~~~p~~ava~GAa~~a~ 384 (650)
++.|+|-||.++. +.+.+.|++.+ ...++....-.+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 5789999998886 66666655543 123455555677899999998764
No 43
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.88 E-value=0.072 Score=53.95 Aligned_cols=45 Identities=24% Similarity=0.333 Sum_probs=30.4
Q ss_pred cCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEE
Q 043296 169 AGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLT 217 (650)
Q Consensus 169 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 217 (650)
.|++ +.+.|+..|+|++-...... ...++++++-+|.| +-..++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~--~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAG--QGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT--TTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCC--CCCCCEEEEEeCcc-eEEEEEE
Confidence 3775 68999999999875433221 23467888889987 5555553
No 44
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.73 E-value=0.17 Score=50.47 Aligned_cols=50 Identities=14% Similarity=0.195 Sum_probs=38.2
Q ss_pred CCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHH
Q 043296 336 LVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 336 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~ 386 (650)
+++.|+|.||.+..+.+.+.|++.+...++.... .+.+.+.||+..+...
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 3578999999887788888888887444555555 6688999999987643
No 45
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.68 E-value=0.25 Score=50.11 Aligned_cols=66 Identities=15% Similarity=0.226 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC--CccccccC---CcchhHHhHHHHHHHHHc
Q 043296 317 RKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 317 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~~---~p~~ava~GAa~~a~~~~ 387 (650)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+. +.++..+. -.|.++++|++.+.....
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 334444555555433 5689999999999999999998762 34454443 345688999887655443
No 46
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.41 E-value=0.48 Score=47.89 Aligned_cols=47 Identities=19% Similarity=0.207 Sum_probs=33.0
Q ss_pred CCeEEEEcCccCcHHHHHHHHhhhCC--------ccccccCCcchhHHhHHHHHH
Q 043296 337 VHDIVLVGGSTRIPKVQQLLQDFFNG--------KELCKSINPDEAVAYGAAVQA 383 (650)
Q Consensus 337 i~~V~LvGG~sr~p~v~~~l~~~f~~--------~~i~~~~~p~~ava~GAa~~a 383 (650)
++.|+|-||.+..+.+.+.|++.+.. .++....-.+.+.++|||..+
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 57899999998887777777776521 123333445778999998754
No 47
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.40 E-value=0.18 Score=50.93 Aligned_cols=48 Identities=21% Similarity=0.250 Sum_probs=32.9
Q ss_pred CCeEEEEcCccC-cHHHHHHHHhhhC---------CccccccCCcchhHHhHHHHHHH
Q 043296 337 VHDIVLVGGSTR-IPKVQQLLQDFFN---------GKELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 337 i~~V~LvGG~sr-~p~v~~~l~~~f~---------~~~i~~~~~p~~ava~GAa~~a~ 384 (650)
++.|+|.||.+. .|.+.+.|++.+. ..++......+.+.++||+..+.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 568999999886 5777777766552 12334344566789999998764
No 48
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.39 E-value=0.6 Score=46.59 Aligned_cols=49 Identities=24% Similarity=0.220 Sum_probs=31.9
Q ss_pred CCeEEEEcCcc-Cc-HHHHHHHHhhhC-------CccccccCCcchhHHhHHHHHHHH
Q 043296 337 VHDIVLVGGST-RI-PKVQQLLQDFFN-------GKELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 337 i~~V~LvGG~s-r~-p~v~~~l~~~f~-------~~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
++.|+|-||.+ .. |.+.+.|++.+. ..++....-.+.+.++|||.++..
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 295 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAYL 295 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHHH
Confidence 57889988877 54 655555555441 112444445677999999988753
No 49
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.37 E-value=0.0076 Score=66.19 Aligned_cols=85 Identities=14% Similarity=0.175 Sum_probs=62.2
Q ss_pred EEcHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHH
Q 043296 302 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 381 (650)
Q Consensus 302 ~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~ 381 (650)
.-+|.+|-.+++.+++.+.-.++..++...-....++.|.++||.+++|.+.+.+.+.| +.+|..+ ...++.|+|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHH
Confidence 44788875545666666655555444432212235789999999999999999999999 6777665 457899999999
Q ss_pred HHHHHcC
Q 043296 382 QAAILSG 388 (650)
Q Consensus 382 ~a~~~~~ 388 (650)
.|+.-.|
T Consensus 486 lA~~a~G 492 (554)
T 3l0q_A 486 MGTVAAG 492 (554)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9987654
No 50
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.30 E-value=0.0098 Score=65.04 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=61.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHc
Q 043296 309 EELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 309 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
.++++.+++.+.-.++..++..+.....++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHh
Confidence 5566677777776667777765544456789999999999999999999999 5777664 567899999999998654
No 51
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.27 E-value=0.0076 Score=65.05 Aligned_cols=78 Identities=23% Similarity=0.230 Sum_probs=55.5
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcC
Q 043296 310 ELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
++++.+++.+.-.++..++........++.|.++||.++++.+.+.+.+.+ +.++..+..++.+.|+|||+.|+.-.|
T Consensus 360 ~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 360 ELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 345555555554444444432212234688999999999999999999999 688877655555699999999987654
No 52
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.09 E-value=0.014 Score=63.15 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=57.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcC
Q 043296 309 EELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 309 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
.++++.+++.+.-.++..++...... .++.|.++||.++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 367 ~~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 367 EHLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 34455566666655666555543333 5788999999999999999999999 6777765 4466999999999987654
No 53
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.07 E-value=0.013 Score=63.59 Aligned_cols=77 Identities=14% Similarity=0.111 Sum_probs=55.2
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcC
Q 043296 310 ELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
++++.+++.+.-.++..++...-....++.|.++||.++++.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-.|
T Consensus 367 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 367 EMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcC
Confidence 344555555554444444332111235789999999999999999999999 6777664 4677999999999987654
No 54
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.04 E-value=0.013 Score=63.55 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=56.6
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccc-cccCCcchhHHhHHHHHHHHHcC
Q 043296 310 ELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKEL-CKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i-~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
++++.+++.+.-.++..++...- .. ++.|.++||+++++.+.+.+.+.| +.+| .. ..+.++.|+|||+.|+.-.|
T Consensus 378 ~l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 378 QILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHHHHHHHhC
Confidence 34555566665555555544322 33 789999999999999999999999 6777 55 46899999999999987665
No 55
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.04 E-value=0.0095 Score=64.70 Aligned_cols=74 Identities=24% Similarity=0.368 Sum_probs=53.9
Q ss_pred HHHHHHHhHHHHHHHH---HHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHH
Q 043296 310 ELNMDLFRKCMEPVEK---CLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~ 386 (650)
++++.+++.+.-.++. .|++.+. .++.|.++||.+++|.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-
T Consensus 398 ~l~RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a 472 (515)
T 3i8b_A 398 NLARAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQAAWV 472 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHHHHHH
Confidence 3444555555444433 3344443 4788999999999999999999999 5777664 46779999999999865
Q ss_pred cC
Q 043296 387 SG 388 (650)
Q Consensus 387 ~~ 388 (650)
.|
T Consensus 473 ~G 474 (515)
T 3i8b_A 473 LS 474 (515)
T ss_dssp HH
T ss_pred cC
Confidence 54
No 56
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.85 E-value=0.16 Score=51.12 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=48.7
Q ss_pred HHHHHHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhH
Q 043296 159 RQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 238 (650)
Q Consensus 159 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 238 (650)
...+.++-+..|+++-.+-.|-+|...+.+....... .....+|+|+|||+|.+++++ ++.+.. ....++|.-.
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~-~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vr 165 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPM-EDHISLAMDIGGGSVEFIIGN--KNEILW---KQSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCC-TTCCEEEEEECSSCEEEEEEC--SSCEEE---EEEESCCHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCC-CCCCEEEEEeCCCceEEEEEE--CCeEee---eEEEechhhH
Confidence 3444555566799875555555665444444332211 245799999999999999986 333322 2235788877
Q ss_pred HHHHH
Q 043296 239 FDNRL 243 (650)
Q Consensus 239 ~d~~l 243 (650)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 76654
No 57
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.82 E-value=0.7 Score=45.95 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=36.6
Q ss_pred CCeEEEEcCccCcHHHHHHHHhhhCC-----ccccccCCcchhHHhHHHHHHHHH
Q 043296 337 VHDIVLVGGSTRIPKVQQLLQDFFNG-----KELCKSINPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 337 i~~V~LvGG~sr~p~v~~~l~~~f~~-----~~i~~~~~p~~ava~GAa~~a~~~ 386 (650)
++.|+|-||.+..|.+.+.|++.+.. .++....-.+.+.++||+.++...
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 57899999999887777778777632 134444456779999999887643
No 58
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.79 E-value=1.3 Score=43.76 Aligned_cols=49 Identities=20% Similarity=0.135 Sum_probs=33.2
Q ss_pred CCeEEEEcCccCcHHHHHHHHhhhC-----------CccccccCCcchhHHhHHHHHHHH
Q 043296 337 VHDIVLVGGSTRIPKVQQLLQDFFN-----------GKELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 337 i~~V~LvGG~sr~p~v~~~l~~~f~-----------~~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
++.|+|.||.+..|.+.+.|++.+. ..++....-.+.+.++||+..+..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 5689999998877777666665541 123333334567899999988754
No 59
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.74 E-value=0.025 Score=57.74 Aligned_cols=80 Identities=19% Similarity=0.294 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCceeeecchhHHHHHhc-ccccccCC-CCCceEEEEEeCCcceEEEEEEE--eC--CEEEEEEeeCCCC
Q 043296 160 QATKDAGAIAGLNVMRIINEPTAAAIAY-GLDKKASR-TGEKNVLIFDLGGGTFDVSLLTI--EE--GIFEVKATAGDTH 233 (650)
Q Consensus 160 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~-~~~~~vlV~D~GggT~dvsv~~~--~~--~~~~v~~~~~~~~ 233 (650)
..+..+-+..|+++ .+|+-.+=|.+.| +....... .....++|+|+|||+|+++++.- .. +.+. .....+
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~---~~~Slp 181 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ---GAFSMN 181 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS---EEEEES
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccc---eeEEEe
Confidence 44445555679986 5555544444444 33222211 12356999999999999999864 22 1111 122358
Q ss_pred CChhHHHHHH
Q 043296 234 LGGEDFDNRL 243 (650)
Q Consensus 234 lGG~~~d~~l 243 (650)
+|+..+.+.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9998888776
No 60
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.73 E-value=0.016 Score=62.78 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=54.2
Q ss_pred HHHHHHHhHHHHHHHHHHHh----cCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHH
Q 043296 310 ELNMDLFRKCMEPVEKCLRD----SKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~----~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
++++.+++.+.-.++..++. .+. .++.|.++||.++++.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.
T Consensus 377 ~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~ 451 (501)
T 3g25_A 377 HFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGL 451 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHH
Confidence 34445555554444443332 343 4788999999999999999999999 5777654 5678999999999987
Q ss_pred HcC
Q 043296 386 LSG 388 (650)
Q Consensus 386 ~~~ 388 (650)
-.|
T Consensus 452 a~G 454 (501)
T 3g25_A 452 AVG 454 (501)
T ss_dssp HTT
T ss_pred HhC
Confidence 665
No 61
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.68 E-value=2.1 Score=43.31 Aligned_cols=82 Identities=4% Similarity=-0.003 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHH-h-cC-CCCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeeecchhHHHHHhccccccc
Q 043296 120 PEEISSMVLTKMKEIAEAY-L-GH-AVKNAVVTVPAYFNDSQRQATKDAGAIA-G--LNVMRIINEPTAAAIAYGLDKKA 193 (650)
Q Consensus 120 ~~~v~~~~L~~l~~~a~~~-~-~~-~~~~~VitVPa~~~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaal~y~~~~~~ 193 (650)
++++...+.+.+.+..... . .. .+..+.|++|...+......+.+..+.. + ...+.+.|+..|||+++ . .
T Consensus 45 ~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~- 120 (347)
T 2ch5_A 45 TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P- 120 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C-
Confidence 4444444444444433332 1 12 5678899999998877666666655543 3 13468999999999883 2 1
Q ss_pred CCCCCceEEEEEeCCcc
Q 043296 194 SRTGEKNVLIFDLGGGT 210 (650)
Q Consensus 194 ~~~~~~~vlV~D~GggT 210 (650)
...+++=+|-|.
T Consensus 121 -----~~~v~v~~GTGi 132 (347)
T 2ch5_A 121 -----DGGVVLISGTGS 132 (347)
T ss_dssp -----SCEEEEEESSSE
T ss_pred -----CCcEEEEEcCCc
Confidence 234555556654
No 62
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.64 E-value=0.015 Score=63.47 Aligned_cols=73 Identities=23% Similarity=0.302 Sum_probs=53.8
Q ss_pred HHHHHHhHHHHHHHHHHH----hcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHH
Q 043296 311 LNMDLFRKCMEPVEKCLR----DSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 311 ~~~~~~~~i~~~i~~~l~----~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~ 386 (650)
+++.+++.+.-.++..++ ..+. .++.|.++||+++++.+.+.+.+.| +.+|.++ ...|+.|+|||+.|+.-
T Consensus 376 i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a 450 (526)
T 3ezw_A 376 IIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLA 450 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHH
Confidence 344445554433333333 3443 4789999999999999999999999 6787765 45689999999999877
Q ss_pred cC
Q 043296 387 SG 388 (650)
Q Consensus 387 ~~ 388 (650)
.|
T Consensus 451 ~G 452 (526)
T 3ezw_A 451 VG 452 (526)
T ss_dssp TT
T ss_pred hC
Confidence 65
No 63
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.57 E-value=0.017 Score=63.71 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=57.1
Q ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCcc-CcHHHHHHHHhhhCCccccccCCcchhHHhHHHHH
Q 043296 304 TRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGST-RIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQ 382 (650)
Q Consensus 304 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~ 382 (650)
+|.+ +++.+++.+.-.++..++...-....++.|.++||++ +++.+.+.+.+.| +.+|..+ .+.++.|+|||+.
T Consensus 410 t~~~---l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEE---IYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHH---HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 4554 4555555555444444432211223578999999999 9999999999999 5777654 5678999999999
Q ss_pred HHHHcC
Q 043296 383 AAILSG 388 (650)
Q Consensus 383 a~~~~~ 388 (650)
|+.-.|
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987654
No 64
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.54 E-value=0.028 Score=56.76 Aligned_cols=77 Identities=16% Similarity=0.109 Sum_probs=51.7
Q ss_pred HHHHHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhHH
Q 043296 160 QATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF 239 (650)
Q Consensus 160 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 239 (650)
..+..+-+..|+++..+-.|.+|...+.+...... .....+|+|+|||+|.+++++ ++.+.. ..+.++|+..+
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~--~~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~~G~v~l 173 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK--PEGEVCVVDQGGGSTEYVFGK--GYKVRE---VISLPIGIVNL 173 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC--CCSEEEEEEEETTEEEEEEEE--TTEEEE---EEEECCCHHHH
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc--cCCCEEEEEeCCCcEEEEEEe--CCceee---EEEEeccHHHH
Confidence 44444445789998666667777655555433321 245799999999999999976 444322 22368999888
Q ss_pred HHHH
Q 043296 240 DNRL 243 (650)
Q Consensus 240 d~~l 243 (650)
.+.+
T Consensus 174 ~e~~ 177 (315)
T 1t6c_A 174 TETF 177 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
No 65
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.52 E-value=0.032 Score=60.33 Aligned_cols=77 Identities=17% Similarity=0.177 Sum_probs=54.0
Q ss_pred HHHHHHHhHHHHHHHHHHHhcC-CCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcC
Q 043296 310 ELNMDLFRKCMEPVEKCLRDSK-IDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
++++.+++.+.-.++..++... .....++.|.++||.++++.+.+.+.+.+ +.+|..+ .+.++.|+|||+.|+.-.|
T Consensus 371 ~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 371 HLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 3344455555544444444321 11234678999999999999999999999 6777655 4567999999999986654
No 66
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.51 E-value=0.017 Score=62.63 Aligned_cols=77 Identities=23% Similarity=0.182 Sum_probs=54.8
Q ss_pred cHHHHHHHHHHHHhHHHHHHHH---HHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHH
Q 043296 304 TRARFEELNMDLFRKCMEPVEK---CLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 380 (650)
Q Consensus 304 tr~~fe~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa 380 (650)
+|.+| ++.+++.+.-.++. .|++.+. .++.|.++||.++++.+.+.+.+.| +.+|..+.. .++.|+|||
T Consensus 371 ~~~~l---~rAvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA 442 (508)
T 3ifr_A 371 TRGHL---WRALLEAVALAFRHHVAVLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAA 442 (508)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHH
Confidence 45444 44444444433333 3334443 4788999999999999999999999 678776643 568999999
Q ss_pred HHHHHHcC
Q 043296 381 VQAAILSG 388 (650)
Q Consensus 381 ~~a~~~~~ 388 (650)
+.|+.-.|
T Consensus 443 ~lA~~a~G 450 (508)
T 3ifr_A 443 WVAAIGGG 450 (508)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99987664
No 67
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.51 E-value=0.014 Score=63.43 Aligned_cols=51 Identities=22% Similarity=0.122 Sum_probs=43.1
Q ss_pred CCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcC
Q 043296 336 LVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 336 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
.++.|.++||.+++|.+.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-.|
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcC
Confidence 4788999999999999999999999 6777664 4677999999999987665
No 68
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.50 E-value=0.017 Score=62.71 Aligned_cols=73 Identities=22% Similarity=0.279 Sum_probs=53.4
Q ss_pred HHHHHHhHHHHHHHHHHHh----cCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHH
Q 043296 311 LNMDLFRKCMEPVEKCLRD----SKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 311 ~~~~~~~~i~~~i~~~l~~----~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~ 386 (650)
+++.+++.+.-.++..++. .+. .++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|+|||+.|+.-
T Consensus 375 l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a 449 (510)
T 2p3r_A 375 IIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLA 449 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHH
Confidence 3444555554444443332 243 4788999999999999999999999 6777654 46789999999999876
Q ss_pred cC
Q 043296 387 SG 388 (650)
Q Consensus 387 ~~ 388 (650)
.|
T Consensus 450 ~G 451 (510)
T 2p3r_A 450 VG 451 (510)
T ss_dssp HT
T ss_pred hC
Confidence 65
No 69
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.47 E-value=0.019 Score=62.21 Aligned_cols=77 Identities=19% Similarity=0.245 Sum_probs=55.1
Q ss_pred cHHHHHHHHHHHHhHHHHHHHHHHH---h-cCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHH
Q 043296 304 TRARFEELNMDLFRKCMEPVEKCLR---D-SKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA 379 (650)
Q Consensus 304 tr~~fe~~~~~~~~~i~~~i~~~l~---~-~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GA 379 (650)
+|.+| ++.+++.+.-.++..++ + .+. .++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|+||
T Consensus 373 ~~~~l---~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGa 444 (506)
T 3h3n_X 373 TKEDF---VRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGA 444 (506)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHH
Confidence 45444 44444444443333333 2 343 4788999999999999999999999 5777654 5678999999
Q ss_pred HHHHHHHcC
Q 043296 380 AVQAAILSG 388 (650)
Q Consensus 380 a~~a~~~~~ 388 (650)
|+.|+.-.|
T Consensus 445 A~lA~~a~G 453 (506)
T 3h3n_X 445 AYLAGLAVG 453 (506)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhC
Confidence 999987665
No 70
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.25 E-value=0.023 Score=61.60 Aligned_cols=51 Identities=25% Similarity=0.346 Sum_probs=43.7
Q ss_pred CCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHcC
Q 043296 336 LVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 336 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~~ 388 (650)
.++.|.++||.++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcC
Confidence 3678999999999999999999999 6777655 5577999999999987654
No 71
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.16 E-value=0.6 Score=48.26 Aligned_cols=48 Identities=21% Similarity=0.257 Sum_probs=31.6
Q ss_pred CCeEEEEcCccCc-HHHHHHHHhhhC-------CccccccCCcchhHHhHHHHHHH
Q 043296 337 VHDIVLVGGSTRI-PKVQQLLQDFFN-------GKELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 337 i~~V~LvGG~sr~-p~v~~~l~~~f~-------~~~i~~~~~p~~ava~GAa~~a~ 384 (650)
++.|+|.||.+.. |.+.+.+++.+. ..++....-.+.+.+.||+..+.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 5679999998864 666666665541 12233333455689999998764
No 72
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=95.08 E-value=0.8 Score=46.38 Aligned_cols=69 Identities=19% Similarity=0.252 Sum_probs=48.7
Q ss_pred HHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC--CccccccC---CcchhHHhHHHHHHHHHcC
Q 043296 315 LFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAILSG 388 (650)
Q Consensus 315 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~~---~p~~ava~GAa~~a~~~~~ 388 (650)
+.+.+.+.+.++++..+ ++.|+|+||.+...++++.|.+.+. +.++..+. -.|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34445555666666555 5789999999999999999998763 33444433 3578999999977655544
No 73
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=94.99 E-value=0.89 Score=47.40 Aligned_cols=44 Identities=16% Similarity=0.259 Sum_probs=29.1
Q ss_pred cCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEE
Q 043296 169 AGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLL 216 (650)
Q Consensus 169 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (650)
.|++ +.+.|+..|+|++-...... ...++++++-+|.| +-..++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~--~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS--RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT--TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC--CCCCcEEEEEECCc-EEEEEE
Confidence 3665 58899999999875432211 13457888888887 445555
No 74
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.97 E-value=0.071 Score=57.64 Aligned_cols=76 Identities=17% Similarity=0.295 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCceeeecchhHHHHHhc-ccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhH
Q 043296 160 QATKDAGAIAGLNVMRIINEPTAAAIAY-GLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 238 (650)
Q Consensus 160 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 238 (650)
..+..+-+..|+++ .+|+-.+=|.+.| +...... ..+..+|+|+|||+|.+++.+ ++.+.. ....++|.-.
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~--~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vr 171 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQP--EKGRKLVIDIGGGSTELVIGE--NFEPIL---VESRRMGCVS 171 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSC--CCSCEEEEEECSSCEEEEEEE--TTEEEE---EEEESCCHHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhcc--CCCCEEEEEECCCcEEEEEEe--CCeeeE---EEEEeccHHH
Confidence 33444445569887 5555554444444 4433221 122699999999999999875 444322 2236899988
Q ss_pred HHHHH
Q 043296 239 FDNRL 243 (650)
Q Consensus 239 ~d~~l 243 (650)
+.+.+
T Consensus 172 lte~f 176 (513)
T 1u6z_A 172 FAQLY 176 (513)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 75
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.89 E-value=0.038 Score=59.89 Aligned_cols=73 Identities=21% Similarity=0.195 Sum_probs=52.3
Q ss_pred HHHHHHhHHHHHHHHHHHh----cCCCCCCC-CeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHH
Q 043296 311 LNMDLFRKCMEPVEKCLRD----SKIDKSLV-HDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 311 ~~~~~~~~i~~~i~~~l~~----~~~~~~~i-~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
+++.+++.+.-.++..++. .+. .+ +.|.++||.++++.+.+.+.+.+ +.++... .+.++.|+|||+.|+.
T Consensus 380 l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~ 454 (503)
T 2w40_A 380 IVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGL 454 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHH
Confidence 3444444444444333332 343 35 77999999999999999999999 6777654 4567999999999987
Q ss_pred HcC
Q 043296 386 LSG 388 (650)
Q Consensus 386 ~~~ 388 (650)
-.|
T Consensus 455 ~~G 457 (503)
T 2w40_A 455 EVK 457 (503)
T ss_dssp HTT
T ss_pred HhC
Confidence 654
No 76
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.67 E-value=0.043 Score=59.23 Aligned_cols=48 Identities=21% Similarity=0.200 Sum_probs=40.1
Q ss_pred CCCeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHH
Q 043296 336 LVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 336 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~ 386 (650)
.++.|.++||.++++.+.+.+.+.| +.+|.... .++.|.|||+.|..-
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~a 440 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLMT 440 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHHH
Confidence 4688999999999999999999999 67876543 689999997766543
No 77
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.33 E-value=1.9 Score=43.38 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=28.4
Q ss_pred cCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEE
Q 043296 169 AGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLL 216 (650)
Q Consensus 169 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (650)
.+++ +.+.|+..|+|++-...... ...+.++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~--~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF--TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG--GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC--CCCCcEEEEEECCc-EEEEEE
Confidence 4665 68999999999874332211 13457888888887 444444
No 78
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=94.24 E-value=4.7 Score=39.89 Aligned_cols=64 Identities=17% Similarity=0.095 Sum_probs=40.8
Q ss_pred HHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccC--cHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHH
Q 043296 311 LNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTR--IPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 311 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr--~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~ 384 (650)
.+..++++....+-..+...-. . +++.|+|.||.+. .|.+.+.+++.+ . .|+.+.+.||++++.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 3445556665555555554322 2 5788999999864 466666666643 1 256778999998864
No 79
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.00 E-value=2.2 Score=44.73 Aligned_cols=44 Identities=20% Similarity=0.316 Sum_probs=29.1
Q ss_pred cCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEE
Q 043296 169 AGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLL 216 (650)
Q Consensus 169 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (650)
.|++ +.+.|+..|||++-...... ...++++++-+|.| +-..++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~--~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHS--QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT--TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC--CCCCcEEEEEECCc-EEEEEE
Confidence 4665 58999999999875433221 23457888888887 445554
No 80
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.23 E-value=0.16 Score=54.47 Aligned_cols=71 Identities=10% Similarity=0.004 Sum_probs=53.7
Q ss_pred HHHHHHHHhH--HHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhh-hCCccccccCCcchhHHhHHHHHHHH
Q 043296 309 EELNMDLFRK--CMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDF-FNGKELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 309 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~-f~~~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
..+.+.+++. +.-.++..++...- .+.|.++||++++|.+.+.+.+. | +.++.++. ..++.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4566666663 55555666665432 26899999999999999999999 9 67877664 467899999999874
No 81
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=91.12 E-value=13 Score=37.08 Aligned_cols=50 Identities=28% Similarity=0.387 Sum_probs=31.4
Q ss_pred HHcCCceeeecchhHHHHHhcccccc-------c-CCCCCceEEEEEeCCcceEEEEEE
Q 043296 167 AIAGLNVMRIINEPTAAAIAYGLDKK-------A-SRTGEKNVLIFDLGGGTFDVSLLT 217 (650)
Q Consensus 167 ~~AGl~~~~li~Ep~Aaal~y~~~~~-------~-~~~~~~~vlV~D~GggT~dvsv~~ 217 (650)
+..|++.+.+.|+-.|+|++-..... . .....++++++-+|-|- -..++.
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv~ 156 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHLV 156 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEEe
Confidence 34578767999999999987643210 0 01234668888888873 344443
No 82
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=90.38 E-value=16 Score=36.67 Aligned_cols=57 Identities=21% Similarity=0.256 Sum_probs=34.1
Q ss_pred CCCHHH-HHHHHHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEE
Q 043296 153 YFNDSQ-RQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLL 216 (650)
Q Consensus 153 ~~~~~q-r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (650)
.|.... ++.+.+. .|++ +.+.|+..|||++-...... ...++++++-+|.| +-..++
T Consensus 117 ~w~~~~l~~~l~~~---~~~p-v~v~NDa~aaal~E~~~g~~--~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 117 EWNSVDLRTPLSDT---LHLP-VWVDNDGNCAALAERKFGQG--KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp SCSSEECHHHHHHH---HCSC-EEEEEHHHHHHHHHHHTSTT--TTCSCEEEEEESSS-EEEEEE
T ss_pred CCcCCCHHHHHHHH---HCCC-EEEechhHHHHHHHHHhCCC--CCCCcEEEEEECCC-EEEEEE
Confidence 455332 3444433 3665 58899999999875432221 13456888888887 445544
No 83
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=90.05 E-value=0.91 Score=43.82 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=18.3
Q ss_pred cEEEEEcCcceeEEEEEECCe
Q 043296 8 KAIGIDLGTTYSCVGVWQNDR 28 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~ 28 (650)
..++||.|+|+++.++++++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 479999999999999997654
No 84
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=86.68 E-value=1.5 Score=47.23 Aligned_cols=76 Identities=22% Similarity=0.285 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCCCCChhH
Q 043296 159 RQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 238 (650)
Q Consensus 159 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 238 (650)
...+.++-+..|+++-.+=-|-+|.-.+.+..... .....+|+|+|||+|.+++++ ++.+. .....++|.-.
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~---~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vr 174 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGF---YQPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGLR 174 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHS---SSCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHHH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcC---CCCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEEe
Confidence 34445555667998744444445544444443322 122459999999999999987 43332 12235788877
Q ss_pred HHHH
Q 043296 239 FDNR 242 (650)
Q Consensus 239 ~d~~ 242 (650)
+.+.
T Consensus 175 l~e~ 178 (508)
T 3hi0_A 175 LSEQ 178 (508)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 7653
No 85
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=83.70 E-value=3 Score=42.29 Aligned_cols=74 Identities=14% Similarity=0.204 Sum_probs=47.0
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccc----cCCcchhHHhHHHHHHHH
Q 043296 310 ELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCK----SINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~----~~~p~~ava~GAa~~a~~ 385 (650)
++..-+.+=+...|.+.++... ..++.|+++||+++.|.|.++|++.+++.++.. .++++.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 3344444444455555555432 136789999999999999999999996554432 234554445556777664
Q ss_pred H
Q 043296 386 L 386 (650)
Q Consensus 386 ~ 386 (650)
.
T Consensus 337 ~ 337 (371)
T 3qbx_A 337 F 337 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 86
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=83.29 E-value=7 Score=39.87 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=21.8
Q ss_pred CCCC-CCCcEEEEEcCcceeEEEEEECCe
Q 043296 1 MAAK-TEGKAIGIDLGTTYSCVGVWQNDR 28 (650)
Q Consensus 1 M~~~-~~~~vvGID~GTt~s~va~~~~g~ 28 (650)
|+-. ....++|||+|.|++.++++++|.
T Consensus 2 ~~~n~d~~~~lgiDIGgt~i~~~l~d~G~ 30 (366)
T 3mcp_A 2 MMYTNDNRIVMTLDAGGTNFVFSAIQGGK 30 (366)
T ss_dssp CTTTTCCCEEEEEECSSSEEEEEEEETTE
T ss_pred ccCCCCCCEEEEEEECcceEEEEEEECCE
Confidence 4433 456899999999999999988443
No 87
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=81.78 E-value=3.1 Score=43.85 Aligned_cols=56 Identities=13% Similarity=-0.018 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHcCCc--eeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEE
Q 043296 157 SQRQATKDAGAIAGLN--VMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTI 218 (650)
Q Consensus 157 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (650)
.-++.+.++....|++ ++.++|+..|++++-.+. ..++++.+=+|-|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~------~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT------DAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH------CTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc------CCccEEEEEECcEEEEEEEECC
Confidence 4567778888666764 478999999999987662 2457788888888666666554
No 88
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=81.01 E-value=1 Score=48.56 Aligned_cols=27 Identities=26% Similarity=0.337 Sum_probs=19.0
Q ss_pred CCCCCCCcEEEEEcCcceeEEEEEECC
Q 043296 1 MAAKTEGKAIGIDLGTTYSCVGVWQND 27 (650)
Q Consensus 1 M~~~~~~~vvGID~GTt~s~va~~~~g 27 (650)
|+...+..++|||+|||++++++++..
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEETT
T ss_pred CCcccCCEEEEEEecCcceEEEEECCC
Confidence 666677899999999999999999743
No 89
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=79.96 E-value=9 Score=37.85 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=28.8
Q ss_pred cCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEE
Q 043296 169 AGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLL 216 (650)
Q Consensus 169 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 216 (650)
.|++ +.+.|+..|+|++-...... ...++++++-+|.| +-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~--~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEA--XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT--TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC--CCCCcEEEEEECCc-eEEEEE
Confidence 3776 58999999999875443221 23456888888865 444444
No 90
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=79.94 E-value=15 Score=39.60 Aligned_cols=204 Identities=14% Similarity=0.143 Sum_probs=100.5
Q ss_pred CCCcEEEEe-CCCCCHHHHHHH--HHHHHHcCCceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEE
Q 043296 142 AVKNAVVTV-PAYFNDSQRQAT--KDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTI 218 (650)
Q Consensus 142 ~~~~~VitV-Pa~~~~~qr~~l--~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (650)
.+.-+++|. |.+|+....-.. +.-|...|.+.+. ++.-.|-+++....... ..+ +++-+-||++.+..+
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~--~~p---~~l~vsGg~t~~~~~-- 143 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEA--EDP---LTLYVSGGNTQVIAY-- 143 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSC--SSC---EEEEECSSCEEEEEE--
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCC--CCC---cEEEEcCCCcEEEEE--
Confidence 566666776 887665432211 2223344655543 45555544433332221 123 555666777766544
Q ss_pred eCCEEEEEEeeCCCCCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHccCCCceEEEEcccccCee
Q 043296 219 EEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGID 298 (650)
Q Consensus 219 ~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ls~~~~~~~~i~~~~~~~~ 298 (650)
..+.++++....| .--|+.||.. +..| +......+ .|...|...+. .+.++....+.+
T Consensus 144 ~~~~~~~lg~t~d-~s~G~~~D~~-a~~l--------gl~~~gg~----~ie~lA~~g~~--------~~~~p~~~~~~~ 201 (540)
T 3en9_A 144 VSKKYRVFGETLD-IAVGNCLDQF-ARYV--------NLPHPGGP----YIEELARKGKK--------LVDLPYTVKGMD 201 (540)
T ss_dssp ETTEEEEEEEBSS-SCHHHHHHHH-HHHT--------TCCSSCHH----HHHHHHHTCCC--------CCCCCCCEETTE
T ss_pred eCCceEEEeeccc-hHhHHHHHHH-HHHc--------CCCCCCHH----HHHHHHHcCCc--------cCcCCCCCCCcc
Confidence 4688998887664 4457777743 3332 33222222 22222222110 011111111222
Q ss_pred EEEE-------------EcHHHHHHHHH-HHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC--C
Q 043296 299 FYAT-------------ITRARFEELNM-DLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN--G 362 (650)
Q Consensus 299 ~~~~-------------itr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~ 362 (650)
+++. .+..++...++ .+++.+.+.+.++++..+ ++.|+|+||-+....+++.|.+.+. +
T Consensus 202 ~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~ 276 (540)
T 3en9_A 202 IAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQN 276 (540)
T ss_dssp ECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTT
T ss_pred eecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcC
Confidence 2110 01222222222 233444455666666655 5789999999999999999998762 2
Q ss_pred ccccccC---CcchhHHhHHH
Q 043296 363 KELCKSI---NPDEAVAYGAA 380 (650)
Q Consensus 363 ~~i~~~~---~p~~ava~GAa 380 (650)
.++..+. -.|.++..|.+
T Consensus 277 ~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 277 VDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp CEEECCCHHHHSSCHHHHHHH
T ss_pred CEEEeCCCcCCCCCHHHHHHH
Confidence 3444332 13445555544
No 91
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=79.35 E-value=18 Score=32.36 Aligned_cols=19 Identities=16% Similarity=0.191 Sum_probs=12.6
Q ss_pred CCCCHHHHHHHHHHHhhhh
Q 043296 514 GRLSKEDIERMVQEAEKYK 532 (650)
Q Consensus 514 ~~ls~~e~~~~~~~~~~~~ 532 (650)
..||+|+.+++.+..+++.
T Consensus 66 LnLT~EQq~ql~~I~~e~r 84 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYY 84 (175)
T ss_dssp --CCHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHH
Confidence 3599999888876655543
No 92
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=78.69 E-value=17 Score=35.01 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=30.2
Q ss_pred CCCeEEEEcCccCc-HHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHH
Q 043296 336 LVHDIVLVGGSTRI-PKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 336 ~i~~V~LvGG~sr~-p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~ 386 (650)
+++.|+|-||.+.. +.+.+.++ ...++....-.+.+.+.|||.++...
T Consensus 214 dP~~IvlgG~i~~~~~~~~~~~~---~~~~i~~s~l~~~a~~~GAa~l~~~~ 262 (267)
T 1woq_A 214 SPELFIVGGGISKRADEYLPNLR---LRTPIVPAVLRNEAGIVGAAIEIALQ 262 (267)
T ss_dssp CCSEEEEESGGGGGGGGTGGGCC---CSSCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcccHHHHHhhc---cCceEEECCcCCcHHHHHHHHHHHhc
Confidence 36789998988764 44433332 12344444455678999999887544
No 93
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=78.30 E-value=6.4 Score=39.94 Aligned_cols=73 Identities=14% Similarity=0.175 Sum_probs=46.3
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccc----cCCcchhHHhHHHHHHHH
Q 043296 310 ELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCK----SINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~----~~~p~~ava~GAa~~a~~ 385 (650)
++..-+.+=+...|.+.++... ..+.|+++||+++.|.|.++|++.+++.++.. .++++.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4444455555556666665532 35689999999999999999999996544421 233443334445666654
Q ss_pred H
Q 043296 386 L 386 (650)
Q Consensus 386 ~ 386 (650)
.
T Consensus 343 ~ 343 (370)
T 3cqy_A 343 Y 343 (370)
T ss_dssp H
T ss_pred H
Confidence 3
No 94
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=75.54 E-value=4.2 Score=45.64 Aligned_cols=63 Identities=21% Similarity=0.278 Sum_probs=44.8
Q ss_pred HHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC--Ccccccc---CCcchhHHhHHHHHHHHHc
Q 043296 320 MEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN--GKELCKS---INPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 320 ~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~---~~p~~ava~GAa~~a~~~~ 387 (650)
.+.+.++.+..+ ++.|+|+||.+....|++.|.+.+. +.++..+ .--|-++|+|.|++|+...
T Consensus 682 ~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 682 YDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 344444444444 5789999999999999999998862 3344332 2248899999999987654
No 95
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=75.38 E-value=8 Score=42.56 Aligned_cols=64 Identities=16% Similarity=0.153 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccc---cCCcchhHHhHHHHHHHH
Q 043296 317 RKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCK---SINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 317 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~---~~~p~~ava~GAa~~a~~ 385 (650)
+.+.+.+.++.+..+ ++.|+|+||.+...+|++.|.+.+.+.++.. ..--|-++|+|.|+.|+.
T Consensus 585 ~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 585 QGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 333444445555433 5789999999999999999999874344432 223588999999998864
No 96
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=73.24 E-value=6.8 Score=44.19 Aligned_cols=63 Identities=16% Similarity=0.282 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC--CccccccC---CcchhHHhHHHHHHHHH
Q 043296 319 CMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEAVAYGAAVQAAIL 386 (650)
Q Consensus 319 i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~~---~p~~ava~GAa~~a~~~ 386 (650)
+.+.+.++.++.+ ++.|+|.||......+++.|.+.+. +.++..+. --|..+|.|+|++|+..
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 3445555555544 6789999999999999999998873 23444432 23889999999888654
No 97
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=71.98 E-value=4.2 Score=41.31 Aligned_cols=44 Identities=18% Similarity=0.309 Sum_probs=26.7
Q ss_pred eeecchhHHHHHhcc-cccccC-C--CCCceEEEEEeCCcceEEEEEE
Q 043296 174 MRIINEPTAAAIAYG-LDKKAS-R--TGEKNVLIFDLGGGTFDVSLLT 217 (650)
Q Consensus 174 ~~li~Ep~Aaal~y~-~~~~~~-~--~~~~~vlV~D~GggT~dvsv~~ 217 (650)
+++|+-.+=|.+.|. ...... . ...++++|+|+|||+|.++...
T Consensus 111 v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 111 AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 466665554444442 111110 0 1235799999999999999873
No 98
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=71.81 E-value=11 Score=40.03 Aligned_cols=59 Identities=10% Similarity=0.106 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHcCCce--eeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEEe
Q 043296 155 NDSQRQATKDAGAIAGLNV--MRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIE 219 (650)
Q Consensus 155 ~~~qr~~l~~Aa~~AGl~~--~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~ 219 (650)
...-.+.+.+|...-|+++ +.++|+..|++++..+.. .++++-+=+|-||=-+.+..+.
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~------~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD------PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC------TTEEEEEEESSSEEEEEEEEGG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC------CCcEEEEEEecCcceEEEeecc
Confidence 3556788899998888863 689999999999876542 4567777788887776666643
No 99
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=71.46 E-value=3.6 Score=35.49 Aligned_cols=20 Identities=30% Similarity=0.262 Sum_probs=18.3
Q ss_pred cEEEEEcCcceeEEEEEECC
Q 043296 8 KAIGIDLGTTYSCVGVWQND 27 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g 27 (650)
.++|||+|+..+++|+.++.
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 59999999999999999765
No 100
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=70.97 E-value=2.8 Score=45.11 Aligned_cols=20 Identities=25% Similarity=0.187 Sum_probs=18.7
Q ss_pred CCcEEEEEcCcceeEEEEEE
Q 043296 6 EGKAIGIDLGTTYSCVGVWQ 25 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~ 25 (650)
++.++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 56899999999999999998
No 101
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=70.62 E-value=3 Score=33.65 Aligned_cols=20 Identities=15% Similarity=0.235 Sum_probs=17.6
Q ss_pred cEEEEEcCcceeEEEEEECC
Q 043296 8 KAIGIDLGTTYSCVGVWQND 27 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g 27 (650)
.++|||+|+..+++|+.++.
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 38999999999999998654
No 102
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=66.56 E-value=3.6 Score=44.18 Aligned_cols=21 Identities=19% Similarity=0.060 Sum_probs=18.8
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
|+.++|||+|||++++++++.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADR 24 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ccEEEEEEeCCCceEEEEECC
Confidence 568999999999999999863
No 103
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=66.14 E-value=3.6 Score=44.46 Aligned_cols=22 Identities=27% Similarity=0.268 Sum_probs=18.7
Q ss_pred CCCcEEEEEcCcceeEEEEEEC
Q 043296 5 TEGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 5 ~~~~vvGID~GTt~s~va~~~~ 26 (650)
+.++++|||+|||++++++++.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECT
T ss_pred CceEEEEEEccccceeeeEEcC
Confidence 3578999999999999999853
No 104
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=66.14 E-value=3.7 Score=44.04 Aligned_cols=22 Identities=27% Similarity=0.312 Sum_probs=19.1
Q ss_pred CCcEEEEEcCcceeEEEEEECC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQND 27 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~g 27 (650)
|+.++|||+|||++++++++..
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEecCCceEEEEEcCC
Confidence 4689999999999999999643
No 105
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=66.10 E-value=4 Score=44.41 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=19.1
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
++.++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECcccEEEEEECC
Confidence 678999999999999999964
No 106
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=65.97 E-value=19 Score=38.81 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHH-hHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccccc-cCCcchhHHhHHHHH
Q 043296 305 RARFEELNMDLF-RKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKELCK-SINPDEAVAYGAAVQ 382 (650)
Q Consensus 305 r~~fe~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~-~~~p~~ava~GAa~~ 382 (650)
+.++...++..+ +-+.+.+.++.+..+ ++.|.|.||.+....+++.|.+..+-..+.. +.-.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 444444444333 333455555566554 6789999999999999999987653223332 234578999999999
Q ss_pred HHHHcCC
Q 043296 383 AAILSGE 389 (650)
Q Consensus 383 a~~~~~~ 389 (650)
+....|.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9877654
No 107
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=64.55 E-value=4.1 Score=43.74 Aligned_cols=21 Identities=29% Similarity=0.283 Sum_probs=18.8
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
++.++|||+|||++++++++.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 568999999999999999863
No 108
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=63.98 E-value=28 Score=36.43 Aligned_cols=58 Identities=16% Similarity=0.162 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHHHcCCce--eeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEE
Q 043296 155 NDSQRQATKDAGAIAGLNV--MRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTI 218 (650)
Q Consensus 155 ~~~qr~~l~~Aa~~AGl~~--~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (650)
...-.+.+.+|...-|+++ +.++|+..|++++..+.. .++++-+=+|-|+=-..+...
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~------~~~~iglIlGTG~na~yve~~ 230 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED------PKCAVGLIVGTGTNVAYIEDS 230 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC------CCcEEEEEEeCCcceEEEEcC
Confidence 4456788888888778763 589999999998876652 447777888888766665553
No 109
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=63.78 E-value=4.7 Score=43.60 Aligned_cols=21 Identities=19% Similarity=0.113 Sum_probs=19.0
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
++.++|||+|||.+++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 579999999999999999864
No 110
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=63.52 E-value=5.1 Score=42.95 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=19.0
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
++.++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEcCCCceEEEEECC
Confidence 568999999999999999964
No 111
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=62.72 E-value=4.7 Score=43.39 Aligned_cols=20 Identities=35% Similarity=0.451 Sum_probs=17.9
Q ss_pred CcEEEEEcCcceeEEEEEEC
Q 043296 7 GKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~ 26 (650)
+.++|||+|||++++++++.
T Consensus 26 ~~~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred CeEEEEEeCCcceEEEEECC
Confidence 47999999999999999863
No 112
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=62.00 E-value=4.8 Score=43.91 Aligned_cols=21 Identities=24% Similarity=0.251 Sum_probs=18.5
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
++.++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 568999999999999999974
No 113
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=61.80 E-value=4.5 Score=35.49 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=17.7
Q ss_pred cEEEEEcCcceeEEEEEECC
Q 043296 8 KAIGIDLGTTYSCVGVWQND 27 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g 27 (650)
.++|||+|+..+++|+.++.
T Consensus 4 riLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEccCCEEEEEEEECC
Confidence 59999999999999998643
No 114
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=61.39 E-value=5.9 Score=38.42 Aligned_cols=21 Identities=29% Similarity=0.465 Sum_probs=19.1
Q ss_pred cEEEEEcCcceeEEEEEECCe
Q 043296 8 KAIGIDLGTTYSCVGVWQNDR 28 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~~g~ 28 (650)
..++||+|+|++++++++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 589999999999999998774
No 115
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=60.95 E-value=11 Score=39.71 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=17.3
Q ss_pred CceEEEEEeCCcceEEEEEE
Q 043296 198 EKNVLIFDLGGGTFDVSLLT 217 (650)
Q Consensus 198 ~~~vlV~D~GggT~dvsv~~ 217 (650)
..+++|+|+|||++.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 116
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=60.73 E-value=4.3 Score=43.23 Aligned_cols=21 Identities=48% Similarity=0.737 Sum_probs=16.7
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
|+.++|||+|||++++++++.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp ---CEEEEECSSEEEEEEECT
T ss_pred hceEEEEEcCCCCeEEEEEEC
Confidence 568999999999999999963
No 117
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=60.69 E-value=4.7 Score=43.22 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=18.3
Q ss_pred CcEEEEEcCcceeEEEEEECC
Q 043296 7 GKAIGIDLGTTYSCVGVWQND 27 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g 27 (650)
..++|||+|||++++++++..
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEeCCcceEEEEECCC
Confidence 479999999999999999643
No 118
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=60.19 E-value=4.4 Score=43.33 Aligned_cols=20 Identities=25% Similarity=0.217 Sum_probs=17.3
Q ss_pred CcEEEEEcCcceeEEEEEEC
Q 043296 7 GKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~ 26 (650)
..++|||+|||++++++++.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT
T ss_pred cEEEEEeeCCcceEEEEECC
Confidence 46999999999999999864
No 119
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=60.14 E-value=4.7 Score=43.03 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=18.1
Q ss_pred CCcEEEEEcCcceeEEEEEE
Q 043296 6 EGKAIGIDLGTTYSCVGVWQ 25 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~ 25 (650)
++.++|||+|||++++++++
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 56799999999999999985
No 120
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=57.27 E-value=13 Score=32.89 Aligned_cols=18 Identities=33% Similarity=0.516 Sum_probs=16.4
Q ss_pred cEEEEEcCcceeEEEEEE
Q 043296 8 KAIGIDLGTTYSCVGVWQ 25 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~ 25 (650)
.++|||.|+++++.++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 489999999999999984
No 121
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=57.10 E-value=6 Score=42.27 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=17.9
Q ss_pred CcEEEEEcCcceeEEEEEEC
Q 043296 7 GKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~ 26 (650)
..++|||+|||++++++++.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 47999999999999999864
No 122
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=56.22 E-value=20 Score=34.79 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=33.0
Q ss_pred CCeEEEEcCccCcHHHHHHHHhhhCCc------cccccCCcchhHHhHHHHHH
Q 043296 337 VHDIVLVGGSTRIPKVQQLLQDFFNGK------ELCKSINPDEAVAYGAAVQA 383 (650)
Q Consensus 337 i~~V~LvGG~sr~p~v~~~l~~~f~~~------~i~~~~~p~~ava~GAa~~a 383 (650)
++.|+|.||.+..|.+.+.|++.+... ++......+.+.++||+..+
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 567999999887777888887766321 23333445678999999876
No 123
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=54.83 E-value=54 Score=28.53 Aligned_cols=48 Identities=10% Similarity=0.248 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHcCC-CC--cCHHHHHHHHHHHHHhHHHHHHHHhc
Q 043296 571 ADKQKIEKAVDETVEWLDGN-QL--AEVDEFEDKLKELEGLCNPIIAKMYQ 618 (650)
Q Consensus 571 ~~~~~i~~~l~e~~~WL~~~-~~--a~~~~~~~kl~eL~~~~~~i~~r~~e 618 (650)
++|..+..+|.+......+. .. -..++|+.|++.++.+...+...+..
T Consensus 96 ~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 96 EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 46777777777776665543 12 26789999999999999998887754
No 124
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=54.73 E-value=55 Score=37.68 Aligned_cols=58 Identities=10% Similarity=0.169 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEE
Q 043296 155 NDSQRQATKDAGAIA-GL--NVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTI 218 (650)
Q Consensus 155 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (650)
...-.+.+++|...- ++ +++.++|+..|++++..+.. ..+++-+=+|-|+=-..+...
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~------~~~~iglIlGTG~na~y~e~~ 690 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE------PTCEVGLIVGTGSNACYMEEM 690 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC------CCcEEEEEEeCCeeEEEEEcC
Confidence 445577777877643 45 58899999999988876542 446777778888776666553
No 125
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=53.71 E-value=1.1e+02 Score=31.78 Aligned_cols=57 Identities=18% Similarity=0.256 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHcC---CceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEEE
Q 043296 156 DSQRQATKDAGAIAG---LNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTI 218 (650)
Q Consensus 156 ~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 218 (650)
..-.+.+++|...-| ++++.++|+.+|+.++..+.. +.+.+-+=+|-||=-+.+.++
T Consensus 160 ~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~------~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 160 QDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED------PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp SBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC------TTEEEEEEESSSEEEEEEEEG
T ss_pred CcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC------CCceEEEEEeCCceEEEEEec
Confidence 344777888887753 467889999999998865532 346677778888766555544
No 126
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=53.43 E-value=8.3 Score=41.21 Aligned_cols=20 Identities=30% Similarity=0.308 Sum_probs=17.9
Q ss_pred CcEEEEEcCcceeEEEEEEC
Q 043296 7 GKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~ 26 (650)
+.++|||+|||++++++++.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 47999999999999999863
No 127
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=51.09 E-value=56 Score=22.31 Aligned_cols=24 Identities=17% Similarity=0.320 Sum_probs=17.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHcCC
Q 043296 567 KLAAADKQKIEKAVDETVEWLDGN 590 (650)
Q Consensus 567 ~~~~~~~~~i~~~l~e~~~WL~~~ 590 (650)
...-++.+.-.+.+.++++||...
T Consensus 40 ssdmqeveiwtnrikeledwlwge 63 (67)
T 2nr5_A 40 SSDMQEVEIWTNRIKELEDWLWGE 63 (67)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHHHHHHHhhcC
Confidence 334467777889999999999754
No 128
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=50.75 E-value=9 Score=38.16 Aligned_cols=71 Identities=8% Similarity=0.033 Sum_probs=39.5
Q ss_pred cHHHHHHHHHHHHhHHHHHHHHH----HHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCCccc---cccCCcchhHH
Q 043296 304 TRARFEELNMDLFRKCMEPVEKC----LRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNGKEL---CKSINPDEAVA 376 (650)
Q Consensus 304 tr~~fe~~~~~~~~~i~~~i~~~----l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i---~~~~~p~~ava 376 (650)
+.++.+++.+.++++.++.|.+. +.+.+ +..|+.+||+ ++|-..+.+.++-..+ ..+.+.+-+-|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 56677777766665555555544 44433 3379999977 4666665543211100 10223455678
Q ss_pred hHHHHH
Q 043296 377 YGAAVQ 382 (650)
Q Consensus 377 ~GAa~~ 382 (650)
.|+|++
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888854
No 129
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=50.41 E-value=47 Score=32.64 Aligned_cols=50 Identities=20% Similarity=0.227 Sum_probs=34.5
Q ss_pred CCCeEEEEcCccCc-----HHHHHHHHhhhC------CccccccCCcchhHHhHHHHHHHH
Q 043296 336 LVHDIVLVGGSTRI-----PKVQQLLQDFFN------GKELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 336 ~i~~V~LvGG~sr~-----p~v~~~l~~~f~------~~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
+++.|+|-||.+.. +.+++.+++.+. ..++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 36789999998865 467777777652 123334444678999999988753
No 130
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=49.36 E-value=15 Score=35.96 Aligned_cols=67 Identities=6% Similarity=-0.083 Sum_probs=43.7
Q ss_pred HHHHHHhHHHHHHHHHHHhcCCCCC-CCCeEEEEcCccCc--HHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHH
Q 043296 311 LNMDLFRKCMEPVEKCLRDSKIDKS-LVHDIVLVGGSTRI--PKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 311 ~~~~~~~~i~~~i~~~l~~~~~~~~-~i~~V~LvGG~sr~--p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
.+..++++..+.+-..+ . +..- +++.|+|.||.++. +.+++.+++.. .++. .|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~--~~i~---~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG--LTLG---SVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT--CCEE---EEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC--Ceec---ccCcCHHHHHHHHHHh
Confidence 44555666666666665 2 2222 56789999998876 67777776643 1222 3568899999999864
No 131
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=48.92 E-value=3.6 Score=41.90 Aligned_cols=8 Identities=13% Similarity=0.430 Sum_probs=3.8
Q ss_pred HHHHHHHc
Q 043296 581 DETVEWLD 588 (650)
Q Consensus 581 ~e~~~WL~ 588 (650)
..+..|-.
T Consensus 253 ~~i~~~~~ 260 (358)
T 2pk2_A 253 KRIWNWRA 260 (358)
T ss_dssp HHHHHTTT
T ss_pred cchhcccc
Confidence 33445554
No 132
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=47.47 E-value=50 Score=34.80 Aligned_cols=25 Identities=28% Similarity=0.513 Sum_probs=22.0
Q ss_pred CCceEEEEEeCCcceEEEEEEEeCC
Q 043296 197 GEKNVLIFDLGGGTFDVSLLTIEEG 221 (650)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~~ 221 (650)
+...+|.+|+||.++-+.++++.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 4467999999999999999999764
No 133
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=47.02 E-value=23 Score=37.09 Aligned_cols=44 Identities=20% Similarity=0.362 Sum_probs=27.1
Q ss_pred eeeecchhHHHHHhc-----ccccccCCCCCceEEEEEeCCcceEEEEEE
Q 043296 173 VMRIINEPTAAAIAY-----GLDKKASRTGEKNVLIFDLGGGTFDVSLLT 217 (650)
Q Consensus 173 ~~~li~Ep~Aaal~y-----~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 217 (650)
.+++|+-.+=+.+.| .+..-.. ....++.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~~-~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFKT-PGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC----CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhccccC-CCCCceEEEecCCCceEEEecc
Confidence 467777665554444 2221110 1235688999999999998764
No 134
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=46.60 E-value=11 Score=40.44 Aligned_cols=20 Identities=35% Similarity=0.383 Sum_probs=17.6
Q ss_pred CcEEEEEcCcceeEEEEEEC
Q 043296 7 GKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~ 26 (650)
..++|||+|||++++++++.
T Consensus 2 ~~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEecCCcceEEEEECC
Confidence 36899999999999999864
No 135
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=46.49 E-value=14 Score=35.28 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHH
Q 043296 569 AAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKM 616 (650)
Q Consensus 569 ~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~ 616 (650)
.++-+.++...++++.+||......-.+.+....++|+..+.|....+
T Consensus 167 ~ee~r~kl~~~~~el~~~l~p~~~e~~~kl~~~~e~lr~~l~p~~e~l 214 (243)
T 2a01_A 167 SDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDL 214 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 345667788888888888864321122233334455555555544443
No 136
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=45.27 E-value=46 Score=33.89 Aligned_cols=48 Identities=21% Similarity=0.129 Sum_probs=32.9
Q ss_pred CCCeEEEEcCccCcHH-HHHHHHhhhCCc---cccccCCcchhHHhHHHHHH
Q 043296 336 LVHDIVLVGGSTRIPK-VQQLLQDFFNGK---ELCKSINPDEAVAYGAAVQA 383 (650)
Q Consensus 336 ~i~~V~LvGG~sr~p~-v~~~l~~~f~~~---~i~~~~~p~~ava~GAa~~a 383 (650)
+++.|+|.||.+..+. +.+.|++.+... .+........+.++||+..+
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 4789999999887544 777777776321 23333334468999999875
No 137
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=44.83 E-value=83 Score=32.89 Aligned_cols=52 Identities=13% Similarity=0.180 Sum_probs=32.9
Q ss_pred CCceEEEEEeCCcceEEEEEEEeCCE---EEEEEeeCCCCC---ChhHHHHHHHHHHH
Q 043296 197 GEKNVLIFDLGGGTFDVSLLTIEEGI---FEVKATAGDTHL---GGEDFDNRLVNHFV 248 (650)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~~~---~~v~~~~~~~~l---GG~~~d~~l~~~l~ 248 (650)
+...++.+|+||.++-+.++...+.. ++.........+ ++..+=..|++.+.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~ 116 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNA 116 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999988765 222222222232 45555445555543
No 138
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=44.58 E-value=15 Score=32.60 Aligned_cols=18 Identities=39% Similarity=0.405 Sum_probs=16.5
Q ss_pred cEEEEEcCcceeEEEEEE
Q 043296 8 KAIGIDLGTTYSCVGVWQ 25 (650)
Q Consensus 8 ~vvGID~GTt~s~va~~~ 25 (650)
.|+|||.|+++++.++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 589999999999999985
No 139
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=44.24 E-value=13 Score=39.52 Aligned_cols=18 Identities=44% Similarity=0.473 Sum_probs=16.4
Q ss_pred EEEEEcCcceeEEEEEEC
Q 043296 9 AIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 9 vvGID~GTt~s~va~~~~ 26 (650)
++|||+|||++++++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 799999999999999863
No 140
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=43.15 E-value=17 Score=35.56 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=28.7
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeeecchhHHHHHhc
Q 043296 142 AVKNAVVTVPAYFNDSQRQATKDAGA-IAGL-NVMRIINEPTAAAIAY 187 (650)
Q Consensus 142 ~~~~~VitVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y 187 (650)
.+..+.|++|..- ......+++..+ ..++ ..+.+.|+-.||++.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 3556788999864 322234444443 3454 3678999999999863
No 141
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=42.22 E-value=59 Score=24.22 Aligned_cols=41 Identities=7% Similarity=0.170 Sum_probs=28.6
Q ss_pred HHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHhhccchhhhccc
Q 043296 526 QEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKL 568 (650)
Q Consensus 526 ~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~~L~~~~~~~~~ 568 (650)
++.+++..+|...++......+.|+-|-.+|..|.. |+..+
T Consensus 30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK--frSVl 70 (72)
T 3nmd_A 30 EKIEELRQRDALIDELELELDQKDELIQMLQNELDK--YRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccC
Confidence 445566777777777777777888888888877743 55444
No 142
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=41.00 E-value=34 Score=27.87 Aligned_cols=37 Identities=14% Similarity=0.049 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHcC--CCC----cCHHHHHHHHHHHHHhH
Q 043296 573 KQKIEKAVDETVEWLDG--NQL----AEVDEFEDKLKELEGLC 609 (650)
Q Consensus 573 ~~~i~~~l~e~~~WL~~--~~~----a~~~~~~~kl~eL~~~~ 609 (650)
|+.+...+-.++..|.+ ..+ .+.+.++..+++|+..+
T Consensus 6 rN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L 48 (113)
T 1ud0_A 6 SHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWL 48 (113)
T ss_dssp HHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 55666666677777752 211 24555666666665443
No 143
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=40.45 E-value=12 Score=39.94 Aligned_cols=32 Identities=13% Similarity=0.035 Sum_probs=26.1
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcCCceee
Q 043296 144 KNAVVTVPAYFNDSQRQATKDAGAIAGLNVMR 175 (650)
Q Consensus 144 ~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~ 175 (650)
..++.-+|..++...-..+.+++...|+++..
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~ 162 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVA 162 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEE
Confidence 34555589999999999999999999986543
No 144
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=39.55 E-value=18 Score=28.47 Aligned_cols=48 Identities=15% Similarity=0.275 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHcCCCC-cCHHHHHHHHHHHHHhHHHHHHHHhcCC
Q 043296 573 KQKIEKAVDETVEWLDGNQL-AEVDEFEDKLKELEGLCNPIIAKMYQGD 620 (650)
Q Consensus 573 ~~~i~~~l~e~~~WL~~~~~-a~~~~~~~kl~eL~~~~~~i~~r~~e~~ 620 (650)
.++|++....+...+.-+.. .+.+.|+.--+..+.+.+|..++.+.+.
T Consensus 22 ~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~ 70 (92)
T 2o37_A 22 EQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQY 70 (92)
T ss_dssp HHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 34455555555544443321 2333444333344445556666655544
No 145
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=36.98 E-value=1.7e+02 Score=23.70 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHhcCC
Q 043296 570 AADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQGD 620 (650)
Q Consensus 570 ~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~e~~ 620 (650)
+.++..+...|++-.+-|+. ..+.++.+++.++.....+...+++..
T Consensus 65 ~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~ 111 (117)
T 2zqm_A 65 KTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSAL 111 (117)
T ss_dssp EECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666667666666643 577788888888888888888888766
No 146
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=36.19 E-value=7.5 Score=39.51 Aligned_cols=11 Identities=45% Similarity=0.268 Sum_probs=4.4
Q ss_pred hHHhHHHHHHH
Q 043296 374 AVAYGAAVQAA 384 (650)
Q Consensus 374 ava~GAa~~a~ 384 (650)
.|+..|.+.|+
T Consensus 82 lva~acLfLA~ 92 (358)
T 2pk2_A 82 SVAPAALFLAA 92 (358)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333444443
No 147
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=36.12 E-value=72 Score=31.17 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=32.2
Q ss_pred CCCeEEEEcCccCcH----HHHHHHHhhhCC------------ccccccCCcchhHHhHHHHHHHH
Q 043296 336 LVHDIVLVGGSTRIP----KVQQLLQDFFNG------------KELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 336 ~i~~V~LvGG~sr~p----~v~~~l~~~f~~------------~~i~~~~~p~~ava~GAa~~a~~ 385 (650)
+++.|+|-||.++.+ .|++.+.+.... ..+....-.+.+.++|||.++..
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 367899999988754 455555554311 12333445667999999988753
No 148
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=35.77 E-value=91 Score=32.65 Aligned_cols=25 Identities=40% Similarity=0.682 Sum_probs=21.7
Q ss_pred CCceEEEEEeCCcceEEEEEEEeCC
Q 043296 197 GEKNVLIFDLGGGTFDVSLLTIEEG 221 (650)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~~ 221 (650)
+...+|.+|+||.+|-|..|++.++
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 4567999999999999999999764
No 149
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=35.49 E-value=30 Score=35.34 Aligned_cols=21 Identities=14% Similarity=0.401 Sum_probs=18.9
Q ss_pred CcEEEEEcCcceeEEEEEECC
Q 043296 7 GKAIGIDLGTTYSCVGVWQND 27 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~~g 27 (650)
+.++|||+|.|++++++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 469999999999999999865
No 150
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=35.23 E-value=59 Score=29.51 Aligned_cols=25 Identities=8% Similarity=0.069 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhccc
Q 043296 537 QVKKKVEAKNKLENYAYSMRNTVKD 561 (650)
Q Consensus 537 ~~~~~~~akN~LE~~iy~~r~~L~~ 561 (650)
......+.|..|+.|..++|.++..
T Consensus 104 l~kdlEelr~kL~P~~eEL~~~l~~ 128 (191)
T 1nfn_A 104 LGADMEDVCGRLVQYRGEVQAMLGQ 128 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3455677788888888888888864
No 151
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=34.75 E-value=39 Score=26.26 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=25.7
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 043296 146 AVVTVPAYFNDSQRQATKDAGAIAGLNV 173 (650)
Q Consensus 146 ~VitVPa~~~~~qr~~l~~Aa~~AGl~~ 173 (650)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3899999999999999999999999854
No 152
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=34.12 E-value=16 Score=35.70 Aligned_cols=65 Identities=9% Similarity=-0.008 Sum_probs=37.2
Q ss_pred HHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhCC--ccccccCCcchhHHhHHHHHHH
Q 043296 313 MDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFNG--KELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 313 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~--~~i~~~~~p~~ava~GAa~~a~ 384 (650)
..++++....+-..+ .... ..+++.|+|.||.+.. +.+.|++.+.. .++. .+..+.+.||++++.
T Consensus 211 ~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~---~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIG---KILQSPMEGLIQYHS 277 (291)
T ss_dssp THHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEE---EECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEe---ecCCCHHHHHHHHHH
Confidence 344444444444444 2221 1156789999998765 55666666632 1222 345688899998753
No 153
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=33.93 E-value=29 Score=33.48 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=18.1
Q ss_pred EEEEEcCcceeEEEEEECCe
Q 043296 9 AIGIDLGTTYSCVGVWQNDR 28 (650)
Q Consensus 9 vvGID~GTt~s~va~~~~g~ 28 (650)
.+.||.|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 68999999999999998775
No 154
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=33.66 E-value=22 Score=35.10 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=19.8
Q ss_pred CCCCcEEEEEcCcceeEEEEEEC
Q 043296 4 KTEGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 4 ~~~~~vvGID~GTt~s~va~~~~ 26 (650)
+....++|||+|.|++++++++.
T Consensus 4 ~~~~~~lgiDiGgt~i~~~l~d~ 26 (310)
T 3htv_A 4 KQHNVVAGVDMGATHIRFCLRTA 26 (310)
T ss_dssp CCEEEEEEEEECSSEEEEEEEET
T ss_pred CCCCEEEEEEeCCCEEEEEEECC
Confidence 44568999999999999999864
No 155
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=33.42 E-value=73 Score=34.73 Aligned_cols=57 Identities=14% Similarity=0.200 Sum_probs=45.5
Q ss_pred EEEEcHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHH
Q 043296 300 YATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQ 357 (650)
Q Consensus 300 ~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~ 357 (650)
.+.||..+++++... -..+..-++-+|+.++++..+|+.|+|.||++.-=-+.+.+.
T Consensus 499 ~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 378999999887432 234556677789999999999999999999998777777665
No 156
>3p8c_D Wiskott-aldrich syndrome protein family member 1; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=33.06 E-value=33 Score=33.05 Aligned_cols=6 Identities=67% Similarity=1.138 Sum_probs=0.0
Q ss_pred CCCCCC
Q 043296 629 GYGSSG 634 (650)
Q Consensus 629 ~~~~~~ 634 (650)
|+|++|
T Consensus 191 ~~~~~~ 196 (279)
T 3p8c_D 191 GSGGSG 196 (279)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 333333
No 157
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=31.64 E-value=72 Score=32.19 Aligned_cols=21 Identities=19% Similarity=0.156 Sum_probs=18.5
Q ss_pred CCcEEEEEcCcceeEEEEEEC
Q 043296 6 EGKAIGIDLGTTYSCVGVWQN 26 (650)
Q Consensus 6 ~~~vvGID~GTt~s~va~~~~ 26 (650)
+..++|||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 467999999999999999863
No 158
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=31.57 E-value=29 Score=34.55 Aligned_cols=47 Identities=23% Similarity=0.329 Sum_probs=35.1
Q ss_pred CeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHHHHc
Q 043296 338 HDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 387 (650)
Q Consensus 338 ~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~~~~ 387 (650)
..|.|+|........+..|+. + +.++ ...+++.++..|....+..+.
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~-~-G~~~-~~~d~d~a~~~GL~~~a~~~~ 306 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALES-Q-GLNV-RAVDADEAVRAGLSAAARAIW 306 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-T-TCEE-EEEEHHHHHHHHHHHHHHHHS
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCc-eeeCHHHHHHHHHHHHHHHHH
Confidence 569999999888888888875 5 3433 334789999999887666554
No 159
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=31.52 E-value=46 Score=32.69 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=38.8
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC
Q 043296 310 ELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN 361 (650)
Q Consensus 310 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~ 361 (650)
++++...+.+...++++|+++++++.+|++|+.-|+++++ -+.+.+.|+
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3444556677889999999999999999999999987654 456777774
No 160
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=31.43 E-value=2.5e+02 Score=24.11 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHH
Q 043296 572 DKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIA 614 (650)
Q Consensus 572 ~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~ 614 (650)
.-++..+.+.++.+=|..+ ....+|.+.-.+|..+++.|-.
T Consensus 67 ~~~e~~~el~~l~~~l~~n--p~V~~y~~Ae~~l~~LL~~I~~ 107 (151)
T 2pih_A 67 ALKQVEAKIDALQEELEEI--PVIQEFRDSQMEVNDLLQLVAH 107 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 4566667777777777766 3556666666666655554443
No 161
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=31.17 E-value=2e+02 Score=22.92 Aligned_cols=20 Identities=30% Similarity=0.419 Sum_probs=13.7
Q ss_pred CHHHHHHHHHHHHHhHHHHH
Q 043296 594 EVDEFEDKLKELEGLCNPII 613 (650)
Q Consensus 594 ~~~~~~~kl~eL~~~~~~i~ 613 (650)
..+.|+.|+.+|+.......
T Consensus 83 ~Vsalq~KiaeLKrqLAd~v 102 (107)
T 2k48_A 83 AVSTLETKLGELKRQLADLV 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45677888888887655443
No 162
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=29.71 E-value=32 Score=34.23 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=25.6
Q ss_pred eecchhHHHHHhcccccccCCCCCceEEEEEeCCcceEEEEEE
Q 043296 175 RIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLT 217 (650)
Q Consensus 175 ~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 217 (650)
....-|.|.|...+.. . ....+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~-~-----~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKN-I-----EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHH-T-----CSSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHh-c-----CCCEEEEEcCcchhhhhhhc
Confidence 4456677777733222 1 12479999999999999887
No 163
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=29.65 E-value=22 Score=38.79 Aligned_cols=47 Identities=23% Similarity=0.490 Sum_probs=30.6
Q ss_pred HHHhHHHHHHHHHHHhcCCCC--CCCCeEEEEcCccCcHHHHHHHHhhh
Q 043296 314 DLFRKCMEPVEKCLRDSKIDK--SLVHDIVLVGGSTRIPKVQQLLQDFF 360 (650)
Q Consensus 314 ~~~~~i~~~i~~~l~~~~~~~--~~i~~V~LvGG~sr~p~v~~~l~~~f 360 (650)
||=..|++-|..+-.....++ .-.+.|++|||+|.+|.+.-.|.+.+
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHH
Confidence 333444555553332222222 23567999999999999999999987
No 164
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=29.05 E-value=1.5e+02 Score=29.87 Aligned_cols=67 Identities=13% Similarity=0.200 Sum_probs=49.9
Q ss_pred HHHhHHHHHHHHHhhccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHH
Q 043296 544 AKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCN 610 (650)
Q Consensus 544 akN~LE~~iy~~r~~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~ 610 (650)
|+-..++++|.+--.+.-.+.+..+...+..+.+..|.++.+||..-.++-..+++.+.........
T Consensus 160 A~~l~~~~~y~Itv~~~~~~~~~a~~~g~l~~a~~~l~~v~~~l~kv~d~FkaeL~~aa~~a~~aYe 226 (412)
T 2ra1_A 160 AQALRDRLIYDITVAMKAREAQDAVKAGNLDKAKAALDQVNQYVSKVTDAFKAELQKAAQDAKAAYE 226 (412)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhhhhhc
Confidence 5566677788877776655577777888889999999999999987666667777766665544433
No 165
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=28.19 E-value=8.2 Score=37.85 Aligned_cols=59 Identities=15% Similarity=0.058 Sum_probs=32.5
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeeecchhHHHHHhcccccccCCCCCceEEEEEeCCcc
Q 043296 143 VKNAVVTVPAYFNDSQRQATKDAGA-IAGL-NVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGT 210 (650)
Q Consensus 143 ~~~~VitVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y~~~~~~~~~~~~~vlV~D~GggT 210 (650)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+-.||++.-. . ....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g-----~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---G-----QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---T-----TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---C-----CCCcEEEEeCCCh
Confidence 345688888764 222223444333 3454 36789999999998542 1 1233444477766
No 166
>3tso_C RAB11 family-interacting protein 2; RAS GTPase fold (RAB25), vesicle trafficking, endosome, PROT transport; HET: GNP; 1.80A {Homo sapiens} PDB: 2k6s_A
Probab=27.20 E-value=1.6e+02 Score=21.96 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=26.7
Q ss_pred CCCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHhhccc
Q 043296 513 KGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKD 561 (650)
Q Consensus 513 ~~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~~L~~ 561 (650)
+..+|.+|+-++.-+.+ .....+.....+||.||..+--++.+
T Consensus 11 y~~ltreELi~l~lk~~------~~l~~k~~~v~eLEdYID~LLvRVME 53 (75)
T 3tso_C 11 YRSLTYEEVLQELVKHK------ELLRRKDTHIRELEDYIDNLLVRVME 53 (75)
T ss_dssp -CCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45689998877654333 12223334557799999888766643
No 167
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=26.71 E-value=1.8e+02 Score=30.22 Aligned_cols=30 Identities=30% Similarity=0.628 Sum_probs=24.5
Q ss_pred CCceEEEEEeCCcceEEEEEEEeCCEEEEEE
Q 043296 197 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKA 227 (650)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~ 227 (650)
+...+|.+|+||.++-|.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 4567999999999999999999776 55443
No 168
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=26.63 E-value=1.7e+02 Score=23.58 Aligned_cols=21 Identities=24% Similarity=0.194 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHHhHHHHHH
Q 043296 594 EVDEFEDKLKELEGLCNPIIA 614 (650)
Q Consensus 594 ~~~~~~~kl~eL~~~~~~i~~ 614 (650)
..+.|+.|+.+|+..+.....
T Consensus 70 ~Vs~lq~KiaeLKrqLAd~va 90 (113)
T 4fi5_A 70 VAVSIQAKIDELKRQLADRIA 90 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888876655554
No 169
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=26.55 E-value=1.9e+02 Score=30.02 Aligned_cols=24 Identities=38% Similarity=0.588 Sum_probs=21.4
Q ss_pred CCceEEEEEeCCcceEEEEEEEeC
Q 043296 197 GEKNVLIFDLGGGTFDVSLLTIEE 220 (650)
Q Consensus 197 ~~~~vlV~D~GggT~dvsv~~~~~ 220 (650)
+...++.+|+||.++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 456799999999999999999976
No 170
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=26.41 E-value=3.3e+02 Score=23.83 Aligned_cols=63 Identities=8% Similarity=0.133 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHhhccchhhhcccCHHHHHHHHHHHHHHH
Q 043296 514 GRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETV 584 (650)
Q Consensus 514 ~~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~~L~~~~~~~~~~~~~~~~i~~~l~e~~ 584 (650)
.+++.+-..++.+..+.+. ++......+.|..|+.|+.++|..+.. ..++=|.++.-.++++.
T Consensus 83 ~P~t~el~~~l~~~~e~Lr--~~L~~d~EelR~~l~p~~~el~~~l~~------~~EelR~kl~P~~eeL~ 145 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAAQ--ARLGADMEDVRGRLVQYRGEVQAMLGQ------STEELRVRLASHLRKLR 145 (165)
T ss_dssp CCCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTSTTC------CCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 4566555555555554442 334455667777788888888877754 13444555555555553
No 171
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=26.10 E-value=1.1e+02 Score=27.50 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHHHhhhhHHhHHHHHHHHHHHhHHHHHHHHHhhcc
Q 043296 515 RLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVK 560 (650)
Q Consensus 515 ~ls~~e~~~~~~~~~~~~~~d~~~~~~~~akN~LE~~iy~~r~~L~ 560 (650)
+++.+-..++....+.+ +.+..+...+.|..|+.|+-+++..+.
T Consensus 67 p~~~e~~~~l~~~~~~L--r~~l~kdlee~r~~l~P~~~e~~~~~~ 110 (185)
T 3r2p_A 67 PVTQEFWDNLEKETEGL--RQEMSKDLEEVKAKVQPYLDDFQKKWQ 110 (185)
T ss_dssp SCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHH--HHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 44544444444433332 223344566677777777777776664
No 172
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=25.94 E-value=3.3e+02 Score=23.68 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHhhhhHHhHHHHH-HHHHHHhHHHH---HHHHHhhccc---h-hh---hcccCHHHHHHHHHHHHHHH
Q 043296 516 LSKEDIERMVQEAEKYKAEDEQVKK-KVEAKNKLENY---AYSMRNTVKD---D-KV---AGKLAAADKQKIEKAVDETV 584 (650)
Q Consensus 516 ls~~e~~~~~~~~~~~~~~d~~~~~-~~~akN~LE~~---iy~~r~~L~~---~-~~---~~~~~~~~~~~i~~~l~e~~ 584 (650)
=.+++++...+-...|...|..+.+ .....++|+.. +--+.+.|.. + .. ...+-.+=.+..+..-..+.
T Consensus 29 ~~PeDL~~AN~LiK~m~~~d~~r~e~~~k~~seLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell~eL~~~Ck~~qp~i~ 108 (158)
T 1naf_A 29 SHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLF 108 (158)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----CCTTHHHHHHHHHHTHHHHHH
T ss_pred CChhhHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 3567777777777777766655433 23344455443 2222233321 0 00 00111122233344444556
Q ss_pred HHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHhcCCCC
Q 043296 585 EWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQGDGG 622 (650)
Q Consensus 585 ~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~~e~~~~ 622 (650)
+|+.+. .+-++.-.++=.+++.+..++.||..-..|
T Consensus 109 ~Li~e~--~ddee~L~elL~~ND~Ln~vl~kY~~~~~g 144 (158)
T 1naf_A 109 RLASDT--EDNDEALAEILQANDNLTQVINLYKQLVRG 144 (158)
T ss_dssp HHHHHC--CSCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHc--cCCHHHHHHHHHhhHHHHHHHHHHHHHhcC
Confidence 777542 133455567777888888888888776533
No 173
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=25.64 E-value=47 Score=32.43 Aligned_cols=44 Identities=30% Similarity=0.400 Sum_probs=31.8
Q ss_pred CeEEEEcCccCcHHHHHHHHhhhCCccccccCCcchhHHhHHHHHHH
Q 043296 338 HDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAA 384 (650)
Q Consensus 338 ~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~p~~ava~GAa~~a~ 384 (650)
..|.|+|........+..|+. + +.++. ..++++++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~-G~~~~-~~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-I-GREVS-AVAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-T-TCCEE-EEEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCce-ecCHHHHHHHHHHHHHH
Confidence 569999999888888888865 4 34332 34788888888765544
No 174
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=25.11 E-value=2.5e+02 Score=22.05 Aligned_cols=64 Identities=25% Similarity=0.246 Sum_probs=35.2
Q ss_pred HHHHHHhHHHHHHHHHhhccchhhhcccCHHHHH--HHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHH
Q 043296 541 KVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQ--KIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKM 616 (650)
Q Consensus 541 ~~~akN~LE~~iy~~r~~L~~~~~~~~~~~~~~~--~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r~ 616 (650)
..+..+..|.-|-..|.+|.+.+-.--..|++.+ .+...- +..+.|+.|+.+|+..+.....+-
T Consensus 10 Lq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNk~~~~~R~------------~~V~~lq~Ki~elkr~lAd~v~~~ 75 (96)
T 2ic9_A 10 VQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRR------------AAVSALETKLGELKRELADLIAAQ 75 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445566677777777777553211122333322 221111 245778889999988776666543
No 175
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=24.92 E-value=2.7e+02 Score=32.60 Aligned_cols=14 Identities=7% Similarity=0.114 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHH
Q 043296 574 QKIEKAVDETVEWL 587 (650)
Q Consensus 574 ~~i~~~l~e~~~WL 587 (650)
..++..+++++.|+
T Consensus 1033 ~~L~qq~~~l~~~~ 1046 (1080)
T 2dfs_A 1033 TLLKTEKEELNRRI 1046 (1080)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 176
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=24.90 E-value=61 Score=31.83 Aligned_cols=48 Identities=8% Similarity=0.005 Sum_probs=37.5
Q ss_pred HHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC
Q 043296 311 LNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN 361 (650)
Q Consensus 311 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~ 361 (650)
+++-....+...++++|+++++++.+|++|+.-++++++ -+.+.+.|+
T Consensus 214 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 214 VFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 334455677788999999999999999999999987654 446777774
No 177
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=24.59 E-value=66 Score=31.30 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=36.4
Q ss_pred HHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC
Q 043296 313 MDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN 361 (650)
Q Consensus 313 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~ 361 (650)
+.....+...++++|+++++++.+|+.|++-|+++++ -+.+.+.|+
T Consensus 206 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 206 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 3445677788999999999999999999999987654 345777774
No 178
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=24.38 E-value=55 Score=31.59 Aligned_cols=22 Identities=18% Similarity=0.214 Sum_probs=18.9
Q ss_pred CcEEEEEcCcceeEEEEEE-CCe
Q 043296 7 GKAIGIDLGTTYSCVGVWQ-NDR 28 (650)
Q Consensus 7 ~~vvGID~GTt~s~va~~~-~g~ 28 (650)
...+.||.|+|++++++++ ++.
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCE
Confidence 3589999999999999998 554
No 179
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=24.33 E-value=75 Score=32.60 Aligned_cols=42 Identities=12% Similarity=0.278 Sum_probs=29.8
Q ss_pred HHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCcc-CcHHHHHHHHhhh
Q 043296 315 LFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGST-RIPKVQQLLQDFF 360 (650)
Q Consensus 315 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f 360 (650)
.+.++.+.|-..... + ..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 313 f~yri~k~IGa~aa~--L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 313 FVHRIARHIAGHAAS--L--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHTT--C--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH--h--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 344444444443332 2 4599999999999 9999999998765
No 180
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=24.33 E-value=2.2e+02 Score=30.72 Aligned_cols=65 Identities=9% Similarity=0.217 Sum_probs=41.2
Q ss_pred HHHHHhHHHHHHHHHhhccchhhhcccCHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHH
Q 043296 542 VEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAK 615 (650)
Q Consensus 542 ~~akN~LE~~iy~~r~~L~~~~~~~~~~~~~~~~i~~~l~e~~~WL~~~~~a~~~~~~~kl~eL~~~~~~i~~r 615 (650)
.+-+..++..|-.++.+++.+. ..+-.+....+...+++-.+.|.++ |+.+.+.|++-++.+..+
T Consensus 518 ~~~~~~~~e~~~ql~~kme~~~--~~~~~e~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 518 EQKERSYQEHLKQLTEKMENDR--VQLLKEQERTLALKLQEQEQLLKEG-------FQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHh
Confidence 3345567777777888886532 2233555667888899999999887 444555555555555544
No 181
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=23.18 E-value=1.3e+02 Score=29.17 Aligned_cols=47 Identities=6% Similarity=0.040 Sum_probs=36.5
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccCcHHHHHHHHhhhC
Q 043296 312 NMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFFN 361 (650)
Q Consensus 312 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~ 361 (650)
.+.....+...++++|+++++++.+|+.|++-++++++ -+.+.+.|+
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 253 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 34455677788999999999999999999999887543 345666773
No 182
>3p8c_D Wiskott-aldrich syndrome protein family member 1; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=22.78 E-value=44 Score=32.21 Aligned_cols=13 Identities=54% Similarity=0.716 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCC
Q 043296 624 VPMGGGYGSSGSG 636 (650)
Q Consensus 624 ~~~~~~~~~~~~~ 636 (650)
+++||++|++|++
T Consensus 190 ~~~~~~~~~~~~~ 202 (279)
T 3p8c_D 190 GGSGGSGGSGGSG 202 (279)
T ss_dssp -------------
T ss_pred CCCCCCCCCCCCC
Confidence 3333333333333
No 183
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=22.71 E-value=2.5e+02 Score=30.50 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=60.7
Q ss_pred CceEEEEEeCCcceEEEEEEEeCCEEEEEEeeCCC--CCChhHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHH
Q 043296 198 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT--HLGGEDFDNRLVNHFVAEFRRKHKKDISGNARALRRLRTACER 275 (650)
Q Consensus 198 ~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~--~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 275 (650)
...=+-+|+|..|+-+.++.+..+..--.....+. .+|.+-+++.-+.. +
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~--~-------------------------- 256 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVD--E-------------------------- 256 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHH--H--------------------------
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHh--c--------------------------
Confidence 34558999999999999999887755333333223 45665555432111 0
Q ss_pred HHHHccCCCceEEEEcccccCeeEEEEEcHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCeEEEEcCccC
Q 043296 276 AKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTR 348 (650)
Q Consensus 276 ~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr 348 (650)
...-++.+-+-+++.+..+|.++++++++++.+|..+.++|-.+.
T Consensus 257 ----------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M 301 (631)
T 3zyy_X 257 ----------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTM 301 (631)
T ss_dssp ----------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHH
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHH
Confidence 001122333345566777888888889999999999999996543
No 184
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.33 E-value=51 Score=33.31 Aligned_cols=49 Identities=12% Similarity=-0.066 Sum_probs=28.8
Q ss_pred CCeEEEEcC-ccCcHHHHH------HHHhhhCCc-----------cccccCCcchhHHhHHHHHHHH
Q 043296 337 VHDIVLVGG-STRIPKVQQ------LLQDFFNGK-----------ELCKSINPDEAVAYGAAVQAAI 385 (650)
Q Consensus 337 i~~V~LvGG-~sr~p~v~~------~l~~~f~~~-----------~i~~~~~p~~ava~GAa~~a~~ 385 (650)
++.|+|.|| .++.+.+.+ .+.+.+... ++......+.+.++|||.++..
T Consensus 305 p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 305 PLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp CSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHHh
Confidence 456777788 666554444 555543211 1222224457899999988754
No 185
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=21.51 E-value=2.2e+02 Score=22.57 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=10.0
Q ss_pred HHHHHhHHHHHHHHHhhcc
Q 043296 542 VEAKNKLENYAYSMRNTVK 560 (650)
Q Consensus 542 ~~akN~LE~~iy~~r~~L~ 560 (650)
..+.++|..+|.++...|.
T Consensus 8 ~~~l~el~~WL~~~e~~l~ 26 (119)
T 3uun_A 8 QTALEEVLSWLLSAEDTLQ 26 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3445555555555555553
No 186
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.68 E-value=2.4e+02 Score=27.37 Aligned_cols=30 Identities=27% Similarity=0.415 Sum_probs=23.0
Q ss_pred ceEEEEEeCCcceEEEEEEEeCCEEEEEEe
Q 043296 199 KNVLIFDLGGGTFDVSLLTIEEGIFEVKAT 228 (650)
Q Consensus 199 ~~vlV~D~GggT~dvsv~~~~~~~~~v~~~ 228 (650)
..++.+|+|+..+.+.++......+.....
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~ 35 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSI 35 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEE
Confidence 478999999999999999876655443333
No 187
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=20.05 E-value=5.7e+02 Score=24.32 Aligned_cols=51 Identities=22% Similarity=0.296 Sum_probs=29.7
Q ss_pred HHHHHHHHHhHHHHHHHHHhhccc--hhhhccc---CHHHHHHHHHHHHHHHHHHc
Q 043296 538 VKKKVEAKNKLENYAYSMRNTVKD--DKVAGKL---AAADKQKIEKAVDETVEWLD 588 (650)
Q Consensus 538 ~~~~~~akN~LE~~iy~~r~~L~~--~~~~~~~---~~~~~~~i~~~l~e~~~WL~ 588 (650)
.....+.+..|..|.-++|.++.. +++...+ .++-+.++...++++.+-|.
T Consensus 87 ~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py~eelr~k~~~~leeLr~~l~ 142 (273)
T 3s84_A 87 RENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLA 142 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhh
Confidence 334556666777777777777643 1222222 23456677777777777765
Done!