Query         043297
Match_columns 505
No_of_seqs    196 out of 1793
Neff          10.4
Searched_HMMs 46136
Date          Fri Mar 29 03:33:19 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043297.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043297hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.8E-80   4E-85  611.4  44.8  446   19-498    24-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 9.9E-75 2.1E-79  590.1  44.9  469    2-497     9-498 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-74 2.5E-79  592.2  45.5  468   13-504    49-539 (543)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 2.5E-75 5.3E-80  565.9  37.8  439   19-498    29-499 (499)
  5 PLN00110 flavonoid 3',5'-hydro 100.0   2E-74 4.3E-79  585.2  44.9  460   15-500    25-499 (504)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 2.3E-74 4.9E-79  588.2  45.4  457   19-498    32-509 (517)
  7 PLN03112 cytochrome P450 famil 100.0 5.2E-74 1.1E-78  586.6  47.0  483    2-504    12-513 (514)
  8 PLN02183 ferulate 5-hydroxylas 100.0 2.7E-73 5.9E-78  580.1  45.6  453   17-497    32-511 (516)
  9 PLN02394 trans-cinnamate 4-mon 100.0 6.5E-73 1.4E-77  577.3  46.1  467    7-499    16-503 (503)
 10 PTZ00404 cytochrome P450; Prov 100.0 7.2E-73 1.6E-77  574.0  43.4  440   19-497    27-482 (482)
 11 PLN00168 Cytochrome P450; Prov 100.0 1.3E-71 2.8E-76  568.2  47.3  464   19-499    33-518 (519)
 12 PLN02966 cytochrome P450 83A1  100.0 1.2E-71 2.7E-76  566.5  46.8  450   19-499    27-499 (502)
 13 PLN02655 ent-kaurene oxidase   100.0 1.5E-70 3.3E-75  553.4  42.1  445   23-499     1-465 (466)
 14 PLN02290 cytokinin trans-hydro 100.0 9.2E-71   2E-75  562.9  38.5  427   33-499    87-516 (516)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 3.2E-70 6.9E-75  517.5  38.3  447   18-499    47-519 (519)
 16 PLN03018 homomethionine N-hydr 100.0 2.5E-69 5.3E-74  548.9  46.5  465   19-504    38-529 (534)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 1.3E-70 2.8E-75  552.8  35.7  442   19-499    33-497 (497)
 18 PF00067 p450:  Cytochrome P450 100.0 1.4E-69   3E-74  549.9  32.6  439   23-494     1-463 (463)
 19 PLN02500 cytochrome P450 90B1  100.0 2.1E-68 4.5E-73  541.7  39.8  426   18-496    35-488 (490)
 20 PLN02738 carotene beta-ring hy 100.0 2.3E-68   5E-73  547.5  40.2  436   31-499   156-596 (633)
 21 PLN02169 fatty acid (omega-1)- 100.0 5.4E-68 1.2E-72  537.1  38.7  439   20-497    30-499 (500)
 22 PLN02774 brassinosteroid-6-oxi 100.0   3E-67 6.4E-72  529.0  37.8  415   19-496    29-462 (463)
 23 PLN03195 fatty acid omega-hydr 100.0   3E-67 6.6E-72  536.6  37.9  444   22-498    31-516 (516)
 24 PLN02196 abscisic acid 8'-hydr 100.0 1.8E-66 3.9E-71  522.9  37.6  412   18-497    32-462 (463)
 25 PLN02936 epsilon-ring hydroxyl 100.0 3.5E-66 7.7E-71  523.9  39.1  437   31-498    41-482 (489)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 4.8E-66   1E-70  519.0  38.5  423   18-499     4-451 (452)
 27 PLN02302 ent-kaurenoic acid ox 100.0 9.2E-65   2E-69  517.0  40.4  423   19-499    40-489 (490)
 28 PLN02987 Cytochrome P450, fami 100.0   6E-64 1.3E-68  502.9  39.1  431    7-498    16-469 (472)
 29 PLN02426 cytochrome P450, fami 100.0 4.5E-64 9.8E-69  507.7  38.0  425   31-498    65-500 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 7.1E-61 1.5E-65  442.5  33.8  433   21-498    31-485 (486)
 31 PLN02648 allene oxide synthase 100.0 3.9E-56 8.4E-61  443.1  30.7  403   18-471    14-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.4E-52 5.2E-57  411.2  32.5  379   31-497    27-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  50.9      11 0.00024   25.5   1.6    7  411-417    44-50  (59)
 34 PF12554 MOZART1:  Mitotic-spin  45.2      70  0.0015   20.7   4.5   43  281-331     5-47  (48)
 35 PF05952 ComX:  Bacillus compet  42.6      23  0.0005   23.8   2.1   20  312-331     4-23  (57)
 36 PF09201 SRX:  SRX;  InterPro:   40.4      23  0.0005   28.4   2.2   23  441-463    18-40  (148)
 37 PRK06789 flagellar motor switc  32.4      29 0.00064   24.8   1.5   39  355-393    21-62  (74)
 38 PF13625 Helicase_C_3:  Helicas  31.4 1.2E+02  0.0026   24.3   5.2   36   31-68     79-114 (129)
 39 PF12508 DUF3714:  Protein of u  30.7      31 0.00067   30.2   1.7   43  349-392    52-94  (200)
 40 PF13893 RRM_5:  RNA recognitio  29.0 1.2E+02  0.0026   19.8   4.1   36   32-67      1-40  (56)
 41 PF14129 DUF4296:  Domain of un  28.8 2.4E+02  0.0052   20.8   6.8   48  280-335    31-78  (87)
 42 KOG1412 Aspartate aminotransfe  20.3 3.5E+02  0.0075   25.7   6.3   63  278-364   343-407 (410)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-80  Score=611.37  Aligned_cols=446  Identities=43%  Similarity=0.805  Sum_probs=393.8

Q ss_pred             CCCCCCCCCCCc---------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCC-Ccccc
Q 043297           19 NAKLPPGPRGLP---------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDP-PIAGL   82 (505)
Q Consensus        19 ~~~~~Pgp~~~p---------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~-~~~~~   82 (505)
                      +.++||||+|||               .+++|+++|||||.+|+|..|+|||+|+++++|++.+++..|.+|+. .....
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            489999999999               78999999999999999999999999999999999999999999987 22345


Q ss_pred             eeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHH
Q 043297           83 VASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  162 (505)
Q Consensus        83 ~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~  162 (505)
                      ...+++.+++++.+|+.|+.+||+....+|+.+.++.......++++.+++.+.+ ..  .+.+||+...+..++.++|+
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~--~~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK--KGEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC--CCceeeHHHHHHHHHHHHHH
Confidence            6666789999998999999999999989999999999988889999999999987 22  23899999999999999999


Q ss_pred             HHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccc-cccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043297          163 NMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIP-VLSWLD-IQGIEKRTKKISLCFENFIDSAVEQYRNK  240 (505)
Q Consensus       163 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (505)
                      +++||.++.....   +...++.+.+.+.+...+.+.+.+++| ++.++. ..+..+..+....++..+++++|+++++.
T Consensus       181 ~~~fG~rf~~~~~---~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  181 RMLFGRRFEEEDE---EEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HHHhCCccccCCc---hHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999987533   445678899999999999999999999 677764 23566777777777999999999999876


Q ss_pred             hhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhC
Q 043297          241 VSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHN  320 (505)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~  320 (505)
                      .   +       .  +...|+++.|++..+++..+. ++++++...+.++++   ||+     |||++|+.|++.+|++|
T Consensus       258 ~---~-------~--~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~---AGt-----dTta~Tl~Wa~a~Ll~~  316 (489)
T KOG0156|consen  258 I---G-------D--EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFL---AGT-----DTTATTLEWAMAELLNN  316 (489)
T ss_pred             h---c-------c--CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHh---ccc-----chHHHHHHHHHHHHHhC
Confidence            4   1       1  122899999999987543333 999999999999999   999     99999999999999999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhcc
Q 043297          321 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  399 (505)
Q Consensus       321 p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~  399 (505)
                      |++|+|+++||++++|.++.++.+|+.+||||+|||+||+|++| +|..++|.+.+|+.++||.|||||.|+++.|++|+
T Consensus       317 Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~r  396 (489)
T KOG0156|consen  317 PEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHR  396 (489)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhc
Confidence            99999999999999998888999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCcc
Q 043297          400 DPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEK  479 (505)
Q Consensus       400 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  479 (505)
                      ||++|+||++|+||||++++     +.......++|||.|+|.|||..+|++++.++++.|+++|||++..+ .++....
T Consensus       397 Dp~vw~dP~eF~PERFl~~~-----d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~  470 (489)
T KOG0156|consen  397 DPKVWEDPEEFKPERFLDSN-----DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA  470 (489)
T ss_pred             CCccCCCccccChhhhcCCc-----cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc
Confidence            99999999999999999742     11234569999999999999999999999999999999999999988 6666555


Q ss_pred             ccceeccCCCeeEeeecCC
Q 043297          480 FGILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       480 ~~~~~~~~~~~~v~~~~r~  498 (505)
                       +++.....++.+...+|.
T Consensus       471 -~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  471 -GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             -ccceecCCcceeeeecCC
Confidence             466667778888888774


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=9.9e-75  Score=590.14  Aligned_cols=469  Identities=31%  Similarity=0.604  Sum_probs=375.8

Q ss_pred             hhHHHHHHHHhhhccccCCCCCCCCCCCc---------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHH
Q 043297            2 VLAVAYFAWNVKKSRKANAKLPPGPRGLP---------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVR   66 (505)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p---------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~   66 (505)
                      +++++.+++.++++...+.+.||||.++|               ++.+++++||++|++|+|+.++|+++||+++++|+.
T Consensus         9 ~l~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~   88 (499)
T PLN03234          9 ALVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLK   88 (499)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHH
Confidence            45555566666666666789999999988               778889999999999999999999999999999999


Q ss_pred             hcCcccccCCCCcccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCc
Q 043297           67 DQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKP  146 (505)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  146 (505)
                      ++...|.+++.........+.|..+.+...++.|+++||.+..++|+++++..+.+.+.+.++.+++.+.....  ++++
T Consensus        89 ~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~--~~~~  166 (499)
T PLN03234         89 TQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD--QSGT  166 (499)
T ss_pred             hCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc--CCCe
Confidence            88777877764432222223344455566789999999986458999999999999999999999999976544  5678


Q ss_pred             cchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccc-cccHHHHHHHHHHH
Q 043297          147 IDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLD-IQGIEKRTKKISLC  225 (505)
Q Consensus       147 vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~  225 (505)
                      +|+.+++..+++|++++++||.+++...    ....++.+.+...........+...+|++.++. +.+..++..++.+.
T Consensus       167 vd~~~~~~~~t~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~  242 (499)
T PLN03234        167 VDLSELLLSFTNCVVCRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKE  242 (499)
T ss_pred             EEHHHHHHHHHHHHHHHHHhCCcccccc----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHH
Confidence            9999999999999999999999886443    223455555555544333333344556544331 12334567788889


Q ss_pred             HHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCc
Q 043297          226 FENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRH  305 (505)
Q Consensus       226 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dT  305 (505)
                      +.+++.++|+++++..   .       . .....|+++.|++..++++.+..++++++.+++.++++   ||+     ||
T Consensus       243 ~~~~~~~~i~~~~~~~---~-------~-~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~---AG~-----dT  303 (499)
T PLN03234        243 LDTYLQELLDETLDPN---R-------P-KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVV---PGT-----DT  303 (499)
T ss_pred             HHHHHHHHHHHHHhhc---c-------c-CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHh---cch-----hh
Confidence            9999999998876432   1       1 22357899999986644222346899999999999999   999     99


Q ss_pred             hhhhHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceec
Q 043297          306 TTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTV  384 (505)
Q Consensus       306 ta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~i  384 (505)
                      |+++++|++++|++||++|+++|+|++++++..+.++++++++||||+|||+||||++| ++..++|.+.+|++++||.|
T Consensus       304 Ta~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~I  383 (499)
T PLN03234        304 AAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDI  383 (499)
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEE
Confidence            99999999999999999999999999999987777899999999999999999999999 77766899999999999999


Q ss_pred             CCCCEEEeechhhccCCCCC-CCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHh
Q 043297          385 PKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHS  463 (505)
Q Consensus       385 p~Gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~  463 (505)
                      ||||.|.++.+.+||||++| +||++|+||||+++++..  .....+.+|+|||.|+|.|||+++|+.|+++++|.|+++
T Consensus       384 P~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~--~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~  461 (499)
T PLN03234        384 PAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGV--DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYK  461 (499)
T ss_pred             CCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCc--CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999 899999999999643211  112345689999999999999999999999999999999


Q ss_pred             cceecCCCC---ccccCccccceeccCCCeeEeeecC
Q 043297          464 FDWKLPAGT---KLDLSEKFGILIKKKEPLVAIPTPR  497 (505)
Q Consensus       464 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~r  497 (505)
                      |++++.++.   .++.....++...++..+.+.+++|
T Consensus       462 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        462 FDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             eeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            999998762   2334345677777777888888876


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.2e-74  Score=592.23  Aligned_cols=468  Identities=26%  Similarity=0.507  Sum_probs=363.0

Q ss_pred             hhccccCCCCCCCCCCCc----------------chHHHHHhhC-CeEEEecCCeeEEEecCHHHHHHHHHhcCcccccC
Q 043297           13 KKSRKANAKLPPGPRGLP----------------TFTELAGVYG-PIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANR   75 (505)
Q Consensus        13 ~~~~~~~~~~~Pgp~~~p----------------~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~   75 (505)
                      +.+..++.+.||||+++|                ++.+|+++|| +|+++|+|++++|+|+||+++++++.+++..|.++
T Consensus        49 ~~~~~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~r  128 (543)
T PLN02971         49 SSRNKKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASR  128 (543)
T ss_pred             hcccCCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCC
Confidence            333334668999999998                3668899999 79999999999999999999999999988788887


Q ss_pred             CCCcccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHH
Q 043297           76 DPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSIS  155 (505)
Q Consensus        76 ~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~  155 (505)
                      +........+.++.+++++.+|+.|+++||+++.+++++...+.+.+.+.++++.+++.+.+...  .++++|+.+.+..
T Consensus       129 p~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~  206 (543)
T PLN02971        129 PLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK--NSEPVDLRFVTRH  206 (543)
T ss_pred             CcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCceehHHHHHH
Confidence            65333322222223356777899999999999767787777778888899999999888875433  4567999999999


Q ss_pred             HHHHHHHHHHhhhhhhhhhcc-CcchHHHHHHHHHHHHHhhh---ccccccccccccccccccHHHHHHHHHHHHHHHHH
Q 043297          156 TFVCVIQNMLWGEALELREKG-ISNLGAELKFKLAELVVLMG---TQNISDIIPVLSWLDIQGIEKRTKKISLCFENFID  231 (505)
Q Consensus       156 ~~~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~  231 (505)
                      +++|++++++||.++...... .+....+....+..++....   ...+.+++|++.+++..+..+...+..+.+.+++.
T Consensus       207 ~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~  286 (543)
T PLN02971        207 YCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHD  286 (543)
T ss_pred             HHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHH
Confidence            999999999999987432100 00111223333333333221   12234566766554222334455556677888888


Q ss_pred             HHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHH
Q 043297          232 SAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVE  311 (505)
Q Consensus       232 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~  311 (505)
                      ..|+++++..+. +       . .....|+++.|++..+++ ....++++++.+++.++++   ||+     |||+++++
T Consensus       287 ~~i~~~~~~~~~-~-------~-~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~l~~---AG~-----dTTa~tl~  348 (543)
T PLN02971        287 PIIDERIKMWRE-G-------K-RTQIEDFLDIFISIKDEA-GQPLLTADEIKPTIKELVM---AAP-----DNPSNAVE  348 (543)
T ss_pred             HHHHHHHHHHhc-c-------C-CCCCcCHHHHHHhhhccc-CCCCCCHHHHHHhHHHHhe---ecc-----chHHHHHH
Confidence            888887654311 0       0 113469999999865431 1224899999999999999   999     99999999


Q ss_pred             HHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEE
Q 043297          312 WTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTI  390 (505)
Q Consensus       312 ~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v  390 (505)
                      |++++|++||++|+|+|+||+++++.++.++++++++||||+|||+||||++| +|..++|.+.+|++++||.|||||.|
T Consensus       349 ~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v  428 (543)
T PLN02971        349 WAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQV  428 (543)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEE
Confidence            99999999999999999999999987788999999999999999999999999 88778999999999999999999999


Q ss_pred             EeechhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCC
Q 043297          391 ILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPA  470 (505)
Q Consensus       391 ~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~  470 (505)
                      ++++|++||||++|+||++|+||||+++.++.  ....++.+|+|||.|+|.|+|++||+.|+++++|.|+++|++++.+
T Consensus       429 ~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~--~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  506 (543)
T PLN02971        429 LLSRYGLGRNPKVWSDPLSFKPERHLNECSEV--TLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAG  506 (543)
T ss_pred             EECcHHhcCChhhCCCccccCcccCCCCCccc--cccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCC
Confidence            99999999999999999999999999642110  1112455899999999999999999999999999999999999886


Q ss_pred             C-CccccCccccceeccCCCeeEeeecCCCCCCcc
Q 043297          471 G-TKLDLSEKFGILIKKKEPLVAIPTPRLPNSELY  504 (505)
Q Consensus       471 ~-~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~~~  504 (505)
                      + ..++.....+ +....+++.|.+.||.. ++||
T Consensus       507 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~  539 (543)
T PLN02971        507 SETRVELMESSH-DMFLSKPLVMVGELRLS-EDLY  539 (543)
T ss_pred             CCCCcchhhhcC-cccccccceeeeeecCC-cccc
Confidence            5 3555555555 55344589999999954 5887


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.5e-75  Score=565.89  Aligned_cols=439  Identities=25%  Similarity=0.416  Sum_probs=347.8

Q ss_pred             CCCCCCCCCCCc----------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCC--CCcc
Q 043297           19 NAKLPPGPRGLP----------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRD--PPIA   80 (505)
Q Consensus        19 ~~~~~Pgp~~~p----------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~--~~~~   80 (505)
                      ..+.+|||+|+|                +......+|||++.++.+.+|.++|+|||+|++|+.++..+|.++.  ...-
T Consensus        29 ~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d  108 (499)
T KOG0158|consen   29 RRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGD  108 (499)
T ss_pred             ccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCC
Confidence            455999999988                2223333448999999999999999999999999999998998853  2221


Q ss_pred             cceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHH
Q 043297           81 GLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCV  160 (505)
Q Consensus        81 ~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dv  160 (505)
                      ...  ..+...++...|+.||++|..++ |.|+..+++.+.+.+++.++++++.+.+...  .+..+++.+.+..+|.||
T Consensus       109 ~~~--~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~--~~~~~~~~dl~~~yT~DV  183 (499)
T KOG0158|consen  109 PED--PLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSE--GGQEGEIKDLCARYTTDV  183 (499)
T ss_pred             CCC--cccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhc--ccCCccHHHHHHHHHHHH
Confidence            111  12334456667999999999997 9999999999999999999999999998654  236889999999999999


Q ss_pred             HHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHh-hhccc----cccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Q 043297          161 IQNMLWGEALELREKGISNLGAELKFKLAELVVL-MGTQN----ISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVE  235 (505)
Q Consensus       161 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~  235 (505)
                      |++++||.+.++..+.    ..++...-...+.. ...+.    ....+|.+...  ...........+.+.+.+...++
T Consensus       184 I~~~AfG~~~~s~~d~----~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l~~~~~~~~~~~~~~~~v~~~v~  257 (499)
T KOG0158|consen  184 IGSCAFGLDANSLRDP----KAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--LRVKLFPEDVTDFFRKLVNSRVE  257 (499)
T ss_pred             HhHhhcccchhhhcCc----hHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--hhcccChHHHHHHHHHHHHHHHH
Confidence            9999999999988742    23333323333322 11111    11222322211  01112233445555566666666


Q ss_pred             HHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcc--cC--CCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHH
Q 043297          236 QYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQEN--ED--SASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVE  311 (505)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~--~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~  311 (505)
                      .|.++              ...++|+++.|++.+.+  .+  ....+|.++|+++++.|++   ||.     ||||++|+
T Consensus       258 ~R~~~--------------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~---AGf-----eTts~tls  315 (499)
T KOG0158|consen  258 QREKE--------------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLL---AGF-----ETTASTLS  315 (499)
T ss_pred             HHHhc--------------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHH---hhh-----HhHHHHHH
Confidence            66221              34789999999999853  11  1225999999999999999   999     99999999


Q ss_pred             HHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCccccc-ceecCCCCE
Q 043297          312 WTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIG-GYTVPKDTT  389 (505)
Q Consensus       312 ~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~-g~~ip~Gt~  389 (505)
                      +++|+||+||++|+|||+||++++.....+|++.+.+|+||++||+||||+|| .+. +.|.+.+|++++ ++.||+|+.
T Consensus       316 f~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~  394 (499)
T KOG0158|consen  316 FALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTP  394 (499)
T ss_pred             HHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCE
Confidence            99999999999999999999999776555999999999999999999999999 777 889999999999 999999999


Q ss_pred             EEeechhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecC
Q 043297          390 IILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLP  469 (505)
Q Consensus       390 v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~  469 (505)
                      |.++++++||||++||||++|+||||.+++.+     ..++.+|+|||.|||+|||.+||.+|+|+.|+.||++|++++.
T Consensus       395 V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~  469 (499)
T KOG0158|consen  395 VMIPTYALHHDPEYWPEPEKFKPERFEEENNK-----SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVC  469 (499)
T ss_pred             EEeecccccCCcccCCCcccCCCccCCCCccc-----ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecC
Confidence            99999999999999999999999999964322     3467799999999999999999999999999999999999998


Q ss_pred             CCCccccCccc---cceeccCCCeeEeeecCC
Q 043297          470 AGTKLDLSEKF---GILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       470 ~~~~~~~~~~~---~~~~~~~~~~~v~~~~r~  498 (505)
                      +. .+.. ...   +.+..|+.++++++++|+
T Consensus       470 ~~-t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  470 PT-TIIP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             Cc-ccCc-ccCCccceeeecCCceEEEEEeCC
Confidence            83 3322 333   677889999999999985


No 5  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2e-74  Score=585.22  Aligned_cols=460  Identities=36%  Similarity=0.727  Sum_probs=370.8

Q ss_pred             ccccCCCCCCCCCCCc--------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcc
Q 043297           15 SRKANAKLPPGPRGLP--------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIA   80 (505)
Q Consensus        15 ~~~~~~~~~Pgp~~~p--------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~   80 (505)
                      ..+.+.+.||||+++|              ++.+++++||+||++|+|+.++|+|+||+++++++.++...|.+++....
T Consensus        25 ~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~  104 (504)
T PLN00110         25 LPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAG  104 (504)
T ss_pred             hhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccc
Confidence            3344778999999988              77899999999999999999999999999999999988777877764332


Q ss_pred             cceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHH
Q 043297           81 GLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCV  160 (505)
Q Consensus        81 ~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dv  160 (505)
                      ......++.+.+++.+|+.|+++||+++++.|++++++.+.+.+.+++..+++.+.+...  +|+++|+.+++..+++|+
T Consensus       105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~--~g~~~~~~~~~~~~~~~v  182 (504)
T PLN00110        105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ--RGEPVVVPEMLTFSMANM  182 (504)
T ss_pred             hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc--CCCcEeHHHHHHHHHHHH
Confidence            222222334456677799999999999856899999999999999999999999876543  567899999999999999


Q ss_pred             HHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043297          161 IQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNK  240 (505)
Q Consensus       161 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (505)
                      |++++||.++.....   ....++...+...+.......+...+|++.|+...+..+...+..+.+.+++.+.++++++.
T Consensus       183 i~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  259 (504)
T PLN00110        183 IGQVILSRRVFETKG---SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTAS  259 (504)
T ss_pred             HHHHHhCCcccccCc---hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999998721111   12355666666665544433334566766655333334556667777888888888877654


Q ss_pred             hhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhC
Q 043297          241 VSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHN  320 (505)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~  320 (505)
                      .   +       . .....|+++.|++..+.+ ++..++++++.+++.++++   ||+     |||+++++|++++|++|
T Consensus       260 ~---~-------~-~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~---Ag~-----dTta~~l~~~l~~L~~~  319 (504)
T PLN00110        260 A---H-------E-RKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFT---AGT-----DTSSSVIEWSLAEMLKN  319 (504)
T ss_pred             c---c-------c-cccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhc---ccc-----cchHHHHHHHHHHHHhC
Confidence            3   1       0 123468999999765331 3456999999999999999   999     99999999999999999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhcc
Q 043297          321 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  399 (505)
Q Consensus       321 p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~  399 (505)
                      |++|+++++|++++++.++.++++++++||||+|||+||||++| ++..++|.+.+|++++||.||+||.|.++.+++|+
T Consensus       320 P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~  399 (504)
T PLN00110        320 PSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGR  399 (504)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcC
Confidence            99999999999999987777899999999999999999999999 77778899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCcc
Q 043297          400 DPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEK  479 (505)
Q Consensus       400 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  479 (505)
                      ||++|+||++|+||||++++... .....+..+|+|||.|+|.|+|++||+.|+++++|.|+++|++++.++..++....
T Consensus       400 d~~~~~dP~~F~PeRfl~~~~~~-~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  478 (504)
T PLN00110        400 DPDVWENPEEFRPERFLSEKNAK-IDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEA  478 (504)
T ss_pred             ChhhcCCcccCCcccccCCCCcc-cccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccc
Confidence            99999999999999999532111 11111235799999999999999999999999999999999999987754444344


Q ss_pred             ccceeccCCCeeEeeecCCCC
Q 043297          480 FGILIKKKEPLVAIPTPRLPN  500 (505)
Q Consensus       480 ~~~~~~~~~~~~v~~~~r~~~  500 (505)
                      .+++..|+.++.+++++|..-
T Consensus       479 ~~~~~~~~~~~~~~~~~r~~~  499 (504)
T PLN00110        479 FGLALQKAVPLSAMVTPRLHQ  499 (504)
T ss_pred             cccccccCCCceEeeccCCCc
Confidence            567778888999999999644


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.3e-74  Score=588.23  Aligned_cols=457  Identities=38%  Similarity=0.741  Sum_probs=368.7

Q ss_pred             CCCCCCCCCCCc--------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCccccee
Q 043297           19 NAKLPPGPRGLP--------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVA   84 (505)
Q Consensus        19 ~~~~~Pgp~~~p--------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~   84 (505)
                      ..+.||||+++|              ++.+|+++||+||++++|+.++|+++||+++++++.++...|.+++........
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~  111 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM  111 (517)
T ss_pred             CCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh
Confidence            457899999998              677889999999999999999999999999999999877778777544332223


Q ss_pred             ecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHH
Q 043297           85 SFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNM  164 (505)
Q Consensus        85 ~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~  164 (505)
                      ...|.+++++.+|+.|+++||+++.+.|+.++++.+.+.+.++++.+++.|.+..   +++++|+.+++..+++|+|+.+
T Consensus       112 ~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~---~~~~vd~~~~~~~~t~dvi~~~  188 (517)
T PLN02687        112 AYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH---GTAPVNLGQLVNVCTTNALGRA  188 (517)
T ss_pred             ccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc---CCCceeHHHHHHHHHHHHHHHH
Confidence            3334566777789999999999975789999999999999999999999997642   4568999999999999999999


Q ss_pred             HhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 043297          165 LWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVV  244 (505)
Q Consensus       165 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (505)
                      +||.++.....+  .....+...+..++...........+|++.++...+..++..+..+.+.+++..+++++++..+. 
T Consensus       189 ~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-  265 (517)
T PLN02687        189 MVGRRVFAGDGD--EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT-  265 (517)
T ss_pred             HhCccccccCCc--chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence            999997543221  22345666666665544333333566766655333334556667788888999999888765310 


Q ss_pred             ccCCCCCCCCCCCcchHHHHHHhhhccc---CCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhCh
Q 043297          245 EGEGGAGNNIEGRNKDFLQLLLELQENE---DSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNP  321 (505)
Q Consensus       245 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p  321 (505)
                              . .....|+++.|++..+++   .++..++++++.+++.++++   ||+     |||+++++|++++|++||
T Consensus       266 --------~-~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~---AG~-----eTta~~l~~~l~~L~~~P  328 (517)
T PLN02687        266 --------G-SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFT---AGT-----DTTSSTVEWAIAELIRHP  328 (517)
T ss_pred             --------c-CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhc---ccc-----CchHHHHHHHHHHHHhCH
Confidence                    0 124579999999876431   12346999999999999999   999     999999999999999999


Q ss_pred             hHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhccC
Q 043297          322 RVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRD  400 (505)
Q Consensus       322 ~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d  400 (505)
                      ++|+++++||+++++.++.++.+++++||||+|||+||||++| ++..++|.+.+|++++||.||+||.|.++.+++|||
T Consensus       329 ~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d  408 (517)
T PLN02687        329 DILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARD  408 (517)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCC
Confidence            9999999999999987777899999999999999999999999 777679999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCc---cccC
Q 043297          401 PQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTK---LDLS  477 (505)
Q Consensus       401 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~---~~~~  477 (505)
                      |++|+||++|+||||+++......+....+.+|+|||.|+|.|+|++||++|+++++|.|+++|++++.++..   ++..
T Consensus       409 ~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  488 (517)
T PLN02687        409 PEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNME  488 (517)
T ss_pred             cccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcc
Confidence            9999999999999999632111111122345899999999999999999999999999999999999987632   2222


Q ss_pred             ccccceeccCCCeeEeeecCC
Q 043297          478 EKFGILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       478 ~~~~~~~~~~~~~~v~~~~r~  498 (505)
                      ...++++.+..++.++++||.
T Consensus       489 ~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        489 EAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             cccceeeecCCCeEEeeccCC
Confidence            334566666778999999994


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.2e-74  Score=586.58  Aligned_cols=483  Identities=31%  Similarity=0.619  Sum_probs=377.7

Q ss_pred             hhHHHHHHHHhhhccc-cCCCCCCCCCCCc--------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHH
Q 043297            2 VLAVAYFAWNVKKSRK-ANAKLPPGPRGLP--------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVR   66 (505)
Q Consensus         2 ~~~~~~~~~~~~~~~~-~~~~~~Pgp~~~p--------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~   66 (505)
                      ++++.+++|.+.+++. .+.+.||||+++|              ++.++++|||++|++++++.++|+++||+++++|+.
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~   91 (514)
T PLN03112         12 VLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILL   91 (514)
T ss_pred             HHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHH
Confidence            4555666666644433 3679999999999              678889999999999999999999999999999999


Q ss_pred             hcCcccccCCCCcccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCc
Q 043297           67 DQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKP  146 (505)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  146 (505)
                      ++...|.+++.........++..+++++.+|+.|+++||++.++.|+.++++.+.+.+.+.++.+++.+.+...  .+++
T Consensus        92 ~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~--~~~~  169 (514)
T PLN03112         92 RQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ--TGKP  169 (514)
T ss_pred             hCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc--cCCe
Confidence            88777877654322222222222345566799999999997657999999999999999999999998875433  5678


Q ss_pred             cchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHH
Q 043297          147 IDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCF  226 (505)
Q Consensus       147 vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~  226 (505)
                      +|+.+.++.+++|+++.++||.++............++...+..++...........+|++.++.+.+..++..+..+.+
T Consensus       170 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  249 (514)
T PLN03112        170 VNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRV  249 (514)
T ss_pred             eeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHH
Confidence            99999999999999999999998743221000123456666666554433333445667666553333446667777888


Q ss_pred             HHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCch
Q 043297          227 ENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHT  306 (505)
Q Consensus       227 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTt  306 (505)
                      .+++...++++++..+. +       .......|+++.|+++.+++ ....++++++.+++.++++   ||+     |||
T Consensus       250 ~~~~~~~i~~~~~~~~~-~-------~~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~---AG~-----dTT  312 (514)
T PLN03112        250 DEFHDKIIDEHRRARSG-K-------LPGGKDMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIA---AAT-----DTS  312 (514)
T ss_pred             HHHHHHHHHHHHHhhcc-c-------ccCCccchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhc---ccc-----ccH
Confidence            88889998887764311 0       00123469999999875432 2235899999999999999   999     999


Q ss_pred             hhhHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecC
Q 043297          307 TTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVP  385 (505)
Q Consensus       307 a~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip  385 (505)
                      |++++|++++|++||++|+++++||+++++.++.++++++++||||+|||+||||++| ++..++|.+.+|++++||.||
T Consensus       313 a~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IP  392 (514)
T PLN03112        313 AVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIP  392 (514)
T ss_pred             HHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeC
Confidence            9999999999999999999999999999987777899999999999999999999999 777678999999999999999


Q ss_pred             CCCEEEeechhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcc
Q 043297          386 KDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFD  465 (505)
Q Consensus       386 ~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~  465 (505)
                      |||.|.++.+++||||++|+||++|+||||..+++.........+.+|+|||.|+|.|||++||++|++++++.|+++|+
T Consensus       393 kGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~  472 (514)
T PLN03112        393 AKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFD  472 (514)
T ss_pred             CCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhee
Confidence            99999999999999999999999999999875321111000123458999999999999999999999999999999999


Q ss_pred             eecCCCC---ccccCccccceeccCCCeeEeeecCCCCCCcc
Q 043297          466 WKLPAGT---KLDLSEKFGILIKKKEPLVAIPTPRLPNSELY  504 (505)
Q Consensus       466 ~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~~~  504 (505)
                      +++.++.   .++.....+++.++++++.++++||..- .+|
T Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~  513 (514)
T PLN03112        473 WSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAP-HLY  513 (514)
T ss_pred             eecCCCCCcccCCCccccCcccccCCCeEEEeecCCcc-ccc
Confidence            9987653   2333334566667778999999999654 555


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.7e-73  Score=580.14  Aligned_cols=453  Identities=36%  Similarity=0.699  Sum_probs=355.7

Q ss_pred             ccCCCCCCCCCCCc--------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccc
Q 043297           17 KANAKLPPGPRGLP--------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGL   82 (505)
Q Consensus        17 ~~~~~~~Pgp~~~p--------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~   82 (505)
                      ..+.+.||||+++|              ++.+|+++||+||++++|+.++|+|+||+++++|+.++...|..++......
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            33678999999999              5778899999999999999999999999999999998776777665432222


Q ss_pred             eeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHH
Q 043297           83 VASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  162 (505)
Q Consensus        83 ~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~  162 (505)
                      .....+.+.+++.+|+.|+++||++..++|+.+.++.+.+. .++++.+++.+...    .++++|+.+++..+++|+++
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~----~~~~v~~~~~~~~~~~~vi~  186 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN----IGKPVNIGELIFTLTRNITY  186 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHH
Confidence            22222234566777999999999954589999999988875 46789999998642    46789999999999999999


Q ss_pred             HHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 043297          163 NMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVS  242 (505)
Q Consensus       163 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  242 (505)
                      +++||.+++...       .++.+.+..+............+|++.++.+....++..+..+.+.+++.+.+++++++..
T Consensus       187 ~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (516)
T PLN02183        187 RAAFGSSSNEGQ-------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRK  259 (516)
T ss_pred             hHhhcCcccchH-------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999998765321       3455555555444433334456677665422233456667777888888888888765431


Q ss_pred             hcccCCCCCCCCCCCcchHHHHHHhhhcccC---------CCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHH
Q 043297          243 VVEGEGGAGNNIEGRNKDFLQLLLELQENED---------SASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWT  313 (505)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~  313 (505)
                      ..+   ...++ .....|+++.++++..++.         ++..++++++.+++.++++   ||+     |||+++++|+
T Consensus       260 ~~~---~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~---AG~-----dTTa~tl~~~  327 (516)
T PLN02183        260 NQN---ADNDS-EEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMF---GGT-----ETVASAIEWA  327 (516)
T ss_pred             ccc---ccccc-ccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHH---cch-----hhHHHHHHHH
Confidence            100   00000 1134689999998654311         1235899999999999999   999     9999999999


Q ss_pred             HHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEe
Q 043297          314 MTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIIL  392 (505)
Q Consensus       314 l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~  392 (505)
                      +++|++||++|+|+++||+++++.++.++.+++++||||+|||+||||++| +|. ..|.+.+|++++||.|||||.|.+
T Consensus       328 l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~-~~r~~~~d~~l~g~~IPkGt~V~~  406 (516)
T PLN02183        328 MAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPL-LLHETAEDAEVAGYFIPKRSRVMI  406 (516)
T ss_pred             HHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccc-eeeeccCceeECCEEECCCCEEEE
Confidence            999999999999999999999986667899999999999999999999999 777 469999999999999999999999


Q ss_pred             echhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC
Q 043297          393 NVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGT  472 (505)
Q Consensus       393 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~  472 (505)
                      +.+++||||++|+||++|+||||++++..   +...+..+|+|||.|+|.|+|++||++|+++++|.|+++|++++.++.
T Consensus       407 ~~~~~hrd~~~~~dP~~F~PeRfl~~~~~---~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~  483 (516)
T PLN02183        407 NAWAIGRDKNSWEDPDTFKPSRFLKPGVP---DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGM  483 (516)
T ss_pred             ehhhhcCCccccCCccccCchhhCCCCCc---cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCC
Confidence            99999999999999999999999963211   112244589999999999999999999999999999999999988764


Q ss_pred             c---cccCccccceeccCCCeeEeeecC
Q 043297          473 K---LDLSEKFGILIKKKEPLVAIPTPR  497 (505)
Q Consensus       473 ~---~~~~~~~~~~~~~~~~~~v~~~~r  497 (505)
                      .   .+.....+.+.++..++.+.+++|
T Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        484 KPSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             CCCCCChhhccccccccCCCcEEEeecC
Confidence            3   232233455555566888999988


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=6.5e-73  Score=577.34  Aligned_cols=467  Identities=31%  Similarity=0.527  Sum_probs=351.5

Q ss_pred             HHHHHhhhccccCCCCCCCCCCCc---------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcc
Q 043297            7 YFAWNVKKSRKANAKLPPGPRGLP---------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDIT   71 (505)
Q Consensus         7 ~~~~~~~~~~~~~~~~~Pgp~~~p---------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~   71 (505)
                      ++.|.+......+++.||||+++|               .+.+|+++||+||++|+|+.++|+|+||+.+++|+.+++..
T Consensus        16 ~~~~~~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~   95 (503)
T PLN02394         16 VLALLVSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVE   95 (503)
T ss_pred             HHHHHHHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCcc
Confidence            333334444455789999999888               67799999999999999999999999999999999987666


Q ss_pred             cccCCCCcccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhh
Q 043297           72 FANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGE  151 (505)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~  151 (505)
                      |.+++...........|.+.+++.+|+.|+++||.+..++|+++.++.+.+.++++++.+++.|.+..+. .++.+|+.+
T Consensus        96 ~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~-~~~~v~~~~  174 (503)
T PLN02394         96 FGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEA-ATEGVVIRR  174 (503)
T ss_pred             ccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhc-cCCcEecHH
Confidence            7665433222222112445666778999999999986689999999999999999999999999765321 345699999


Q ss_pred             hHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhc--cccccccccccccccccHHHHHHHHHHHHHH-
Q 043297          152 LSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGT--QNISDIIPVLSWLDIQGIEKRTKKISLCFEN-  228 (505)
Q Consensus       152 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~-  228 (505)
                      .+..+++|++++++||.+++...+   +....+.............  ..+...+|++.+. ..+..+........... 
T Consensus       175 ~~~~~~~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  250 (503)
T PLN02394        175 RLQLMMYNIMYRMMFDRRFESEDD---PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLAL  250 (503)
T ss_pred             HHHHHHHHHHHHHHhCCCcccccc---hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHH
Confidence            999999999999999999875432   2223332332222222111  1122344543322 11111222222222222 


Q ss_pred             HHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhh
Q 043297          229 FIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTT  308 (505)
Q Consensus       229 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~  308 (505)
                      +....++++++..+..+       .......|+++.|+++.++    +.++++++..++.++++   ||+     ||||+
T Consensus       251 ~~~~~i~~~~~~~~~~~-------~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~---AG~-----dTTa~  311 (503)
T PLN02394        251 FKDYFVDERKKLMSAKG-------MDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINV---AAI-----ETTLW  311 (503)
T ss_pred             HHHHHHHHHHHHhhhcc-------CCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHH---hch-----hhHHH
Confidence            33445565554321000       0012347999999987643    35899999999999888   999     99999


Q ss_pred             hHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCC
Q 043297          309 TVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKD  387 (505)
Q Consensus       309 ~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~G  387 (505)
                      +++|++|+|++||++|++||+||+++++.++.++++++++||||+|||+||||++| +|..++|.+.+|++++||.||+|
T Consensus       312 tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~G  391 (503)
T PLN02394        312 SIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAE  391 (503)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCC
Confidence            99999999999999999999999999987677899999999999999999999999 88877899999999999999999


Q ss_pred             CEEEeechhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhccee
Q 043297          388 TTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWK  467 (505)
Q Consensus       388 t~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~  467 (505)
                      |.|.++.+++||||++|+||++|+||||+++++...  ......+|+|||.|+|.|||++||++|+++++|.|+++|+++
T Consensus       392 t~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~--~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~  469 (503)
T PLN02394        392 SKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVE--ANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELL  469 (503)
T ss_pred             CEEEEchHHHhCCcccCCCccccCccccCCCCCccc--ccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeE
Confidence            999999999999999999999999999996422111  122356899999999999999999999999999999999999


Q ss_pred             cCCCC-ccccCcccc-ceeccCCCeeEeeecCCC
Q 043297          468 LPAGT-KLDLSEKFG-ILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       468 ~~~~~-~~~~~~~~~-~~~~~~~~~~v~~~~r~~  499 (505)
                      +.+|. .++.....+ .....+.+++|++.||..
T Consensus       470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  503 (503)
T PLN02394        470 PPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRSA  503 (503)
T ss_pred             eCCCCCcCccccccCceeeccCCCceEEeecCCC
Confidence            88775 355544454 444344589999999963


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=7.2e-73  Score=573.97  Aligned_cols=440  Identities=23%  Similarity=0.406  Sum_probs=344.9

Q ss_pred             CCCCCCCCCCCc--------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCccccee
Q 043297           19 NAKLPPGPRGLP--------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVA   84 (505)
Q Consensus        19 ~~~~~Pgp~~~p--------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~   84 (505)
                      ..+.+|||+++|              ++.+++++||+||++++|+.++|+++||+++++|+.++...|.+++........
T Consensus        27 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~  106 (482)
T PTZ00404         27 HKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHG  106 (482)
T ss_pred             cCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeee
Confidence            688999999988              667899999999999999999999999999999999876566655433222111


Q ss_pred             ecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHH
Q 043297           85 SFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNM  164 (505)
Q Consensus        85 ~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~  164 (505)
                       ..|++++. .+|+.|+++||+++ +.|+..+++.+.+.+.+.++.+++.|.+...  .++.+|+.+++..+++|+++.+
T Consensus       107 -~~~~~l~~-~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~~~  181 (482)
T PTZ00404        107 -TFYHGIVT-SSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIES--SGETFEPRYYLTKFTMSAMFKY  181 (482)
T ss_pred             -ccCCceec-cChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHh--cCCccCHHHHHHHHHHHHHHHH
Confidence             12566554 47999999999997 9999999999999999999999999976433  4667999999999999999999


Q ss_pred             HhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 043297          165 LWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVV  244 (505)
Q Consensus       165 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (505)
                      +||.+++..++...+....+...+..++...........++++..+ .........+..+.+.+++.+.++++++..   
T Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---  257 (482)
T PTZ00404        182 IFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTI---  257 (482)
T ss_pred             HhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---
Confidence            9999886432111112245666666655544332222223332221 111122334456667777777776655432   


Q ss_pred             ccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHH
Q 043297          245 EGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVM  324 (505)
Q Consensus       245 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q  324 (505)
                      +         .....|+++.|+++..+   ....+..++++++.++++   ||+     |||+++++|++++|++||++|
T Consensus       258 ~---------~~~~~dll~~ll~~~~~---~~~~~~~~i~~~~~~~~~---AG~-----dTta~~l~~~l~~L~~~P~vq  317 (482)
T PTZ00404        258 D---------PEVPRDLLDLLIKEYGT---NTDDDILSILATILDFFL---AGV-----DTSATSLEWMVLMLCNYPEIQ  317 (482)
T ss_pred             C---------CCCcccHHHHHHHHhcc---CCcccHHHHHHHHHHHHH---hcc-----chHHHHHHHHHHHHHcCcHHH
Confidence            1         12357999999987532   112223457788888888   999     999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccc-cceecCCCCEEEeechhhccCCC
Q 043297          325 KKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSI-GGYTVPKDTTIILNVWAIHRDPQ  402 (505)
Q Consensus       325 ~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l-~g~~ip~Gt~v~~~~~~~~~d~~  402 (505)
                      +|+++||+++++....++++++++||||+|||+||||++| ++..++|.+.+|+++ +||.||+||.|.++.+++||||+
T Consensus       318 ~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~  397 (482)
T PTZ00404        318 EKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEK  397 (482)
T ss_pred             HHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCcc
Confidence            9999999999987667899999999999999999999999 776678999999999 99999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCccccc
Q 043297          403 IWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGI  482 (505)
Q Consensus       403 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  482 (505)
                      +||||++|+||||+++         ..+.+|+|||.|+|.|||++||++|++++++.|+++|++++.+++.++.....++
T Consensus       398 ~~~dP~~F~PeRwl~~---------~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  468 (482)
T PTZ00404        398 YFENPEQFDPSRFLNP---------DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGL  468 (482)
T ss_pred             ccCCccccCccccCCC---------CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccce
Confidence            9999999999999852         1345899999999999999999999999999999999999876654433334456


Q ss_pred             eeccCCCeeEeeecC
Q 043297          483 LIKKKEPLVAIPTPR  497 (505)
Q Consensus       483 ~~~~~~~~~v~~~~r  497 (505)
                      +.. +.++.|++++|
T Consensus       469 ~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        469 TLK-PNKFKVLLEKR  482 (482)
T ss_pred             eec-CCCceeeeecC
Confidence            666 45789999887


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-71  Score=568.24  Aligned_cols=464  Identities=25%  Similarity=0.470  Sum_probs=354.4

Q ss_pred             CCCCCCCCCCCc-----------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCccc
Q 043297           19 NAKLPPGPRGLP-----------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   81 (505)
Q Consensus        19 ~~~~~Pgp~~~p-----------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~   81 (505)
                      ..+.||||+++|                 ++.+|+++||++|++++|+.|+|+|+||+++++++.++...|.+++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            467899999988                 357789999999999999999999999999999999887778776543322


Q ss_pred             ceeecCCCceec-CCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHH
Q 043297           82 LVASFGGNDILF-SNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCV  160 (505)
Q Consensus        82 ~~~~~~g~~~~~-~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dv  160 (505)
                      ...+. +.+++. ..+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.|.+...  .++.+|+.+.+..++.++
T Consensus       113 ~~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        113 RLLGE-SDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAE--DAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             hhhcc-CCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcCHHHHHHHHHHHH
Confidence            22221 222333 35799999999854459999999999999999999999999976543  445789999999999999


Q ss_pred             HHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhh-hccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043297          161 IQNMLWGEALELREKGISNLGAELKFKLAELVVLM-GTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRN  239 (505)
Q Consensus       161 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  239 (505)
                      ++.++||.+++...      ...+........... ....+...+|++.+....+..++..+..+.+.+++...++++++
T Consensus       190 i~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (519)
T PLN00168        190 LVLMCFGERLDEPA------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARRE  263 (519)
T ss_pred             HHHHHcCCCcChhh------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999875321      122333333222211 11223345565432211122344556777888899999988775


Q ss_pred             hhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhh
Q 043297          240 KVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMH  319 (505)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~  319 (505)
                      ..+..+..+...+.......|+++.|++...++.++..++++++.+++.++++   ||+     |||+++++|++++|++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~---AG~-----dTTa~~l~~~l~~L~~  335 (519)
T PLN00168        264 YKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLN---AGT-----DTTSTALQWIMAELVK  335 (519)
T ss_pred             HhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHH---hcc-----hHHHHHHHHHHHHHHh
Confidence            43110000000000011246899999986543223346999999999999999   999     9999999999999999


Q ss_pred             ChhHHHHHHHHHHHhhCCC-CCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhh
Q 043297          320 NPRVMKKVQEELAQVVGMD-SCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAI  397 (505)
Q Consensus       320 ~p~~q~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~  397 (505)
                      ||++|+++++||+++++.+ +.++++++++||||+|||+||||++| ++..++|.+.+|++++||.|||||.|.++.+++
T Consensus       336 ~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~  415 (519)
T PLN00168        336 NPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEM  415 (519)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHH
Confidence            9999999999999999753 56899999999999999999999999 777778999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcccccCCCCCCcc-ccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCcccc
Q 043297          398 HRDPQIWDNPLEFGPEKFLNDGIASKFD-YSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDL  476 (505)
Q Consensus       398 ~~d~~~~~~p~~F~P~R~l~~~~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~  476 (505)
                      ||||++|+||++|+||||++++.+...+ ...++..|+|||.|+|.|||++||++|++++++.|+++|+|++.++..++.
T Consensus       416 ~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  495 (519)
T PLN00168        416 GRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDF  495 (519)
T ss_pred             hcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCCh
Confidence            9999999999999999999632111111 112345899999999999999999999999999999999999987654444


Q ss_pred             CccccceeccCCCeeEeeecCCC
Q 043297          477 SEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       477 ~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      ....+++..++.++.|++++|+.
T Consensus       496 ~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        496 AEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             hhhceeEEeecCCcEEEEEeccC
Confidence            33344556666789999999974


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.2e-71  Score=566.51  Aligned_cols=450  Identities=31%  Similarity=0.578  Sum_probs=349.1

Q ss_pred             CCCCCCCCCCCc---------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccce
Q 043297           19 NAKLPPGPRGLP---------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV   83 (505)
Q Consensus        19 ~~~~~Pgp~~~p---------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~   83 (505)
                      ..+.||||+++|               ++.+|+++||+||++|+++.++|+|+||+++++|+.++...|.+++.......
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~  106 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF  106 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence            567899999988               77889999999999999999999999999999999987766766554332222


Q ss_pred             eecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHH
Q 043297           84 ASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQN  163 (505)
Q Consensus        84 ~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~  163 (505)
                      ...+..++.+..+|+.|+++|+++..++|+.+++..+.+.+.+.++.+++.|.+...  +++.+|+.+++..+++|+|+.
T Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~t~dvi~~  184 (502)
T PLN02966        107 ISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD--KSEVVDISELMLTFTNSVVCR  184 (502)
T ss_pred             eccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCceeHHHHHHHHHHHHHHH
Confidence            223333444556799999999994458999999999999999999999999976543  566899999999999999999


Q ss_pred             HHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 043297          164 MLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLD-IQGIEKRTKKISLCFENFIDSAVEQYRNKVS  242 (505)
Q Consensus       164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  242 (505)
                      ++||.+++....    ...++...+...........+...+|++..+. +.+..+......+...+++.+.++++.+.. 
T Consensus       185 ~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  259 (502)
T PLN02966        185 QAFGKKYNEDGE----EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK-  259 (502)
T ss_pred             HHhCCccCccch----HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            999998864432    23445555555444433333344455433221 122223334455566677777776654321 


Q ss_pred             hcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChh
Q 043297          243 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  322 (505)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~  322 (505)
                        .       . .....|+++.|++..+++..+..++++++.+++.++++   ||+     |||+++++|++|+|++||+
T Consensus       260 --~-------~-~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~---AG~-----eTta~~l~~~l~~L~~~P~  321 (502)
T PLN02966        260 --R-------V-KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVV---AGT-----DTAAAAVVWGMTYLMKYPQ  321 (502)
T ss_pred             --c-------c-ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHh---ccc-----cchHHHHHHHHHHHHhCHH
Confidence              0       0 11346899999987654322346899999999999999   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCC--CCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhcc
Q 043297          323 VMKKVQEELAQVVGMD--SCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  399 (505)
Q Consensus       323 ~q~~lr~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~  399 (505)
                      +|+++++||+++++.+  ..++++++++||||+|||+||||++| ++..++|.+.+|++++||.||+||.|.++++++||
T Consensus       322 ~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~r  401 (502)
T PLN02966        322 VLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSR  401 (502)
T ss_pred             HHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccC
Confidence            9999999999998742  35789999999999999999999999 87767899999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCc---cc
Q 043297          400 DPQIW-DNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTK---LD  475 (505)
Q Consensus       400 d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~---~~  475 (505)
                      ||++| |||++|+||||++++.    .....+..|+|||.|+|.|+|++||++|+++++|.|+++|+|++.++..   ++
T Consensus       402 dp~~~g~dP~~F~PeRwl~~~~----~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~  477 (502)
T PLN02966        402 DEKEWGPNPDEFRPERFLEKEV----DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDIN  477 (502)
T ss_pred             CcccccCChhhCChhhhcCCCC----CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCC
Confidence            99999 9999999999995321    1122455899999999999999999999999999999999999987742   23


Q ss_pred             cCccccceeccCCCeeEeeecCCC
Q 043297          476 LSEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       476 ~~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      .+...++...++..+  ++++|+-
T Consensus       478 ~~~~~~~~~~~~~~~--~~~~~~~  499 (502)
T PLN02966        478 MDVMTGLAMHKSQHL--KLVPEKV  499 (502)
T ss_pred             cccccCeeeccCCCe--EEEEEeC
Confidence            333445554333345  4555543


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.5e-70  Score=553.38  Aligned_cols=445  Identities=26%  Similarity=0.455  Sum_probs=350.1

Q ss_pred             CCCCCCCc---------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccceeecC
Q 043297           23 PPGPRGLP---------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFG   87 (505)
Q Consensus        23 ~Pgp~~~p---------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~   87 (505)
                      ||||+|+|               ++++|+++||+||++++|++++|+|+||+++++|+.++...|.+++...........
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68898888               788899999999999999999999999999999999987788766533222212111


Q ss_pred             CCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHHHhh
Q 043297           88 GNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWG  167 (505)
Q Consensus        88 g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG  167 (505)
                      +..+++..+|+.|+++||++.+++|+...++.+.+.+.+.++.+++.+.+......+++||+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22244444699999999988778899888999999999999999998875543224567999999999999999999999


Q ss_pred             hhhhhhhcc-Ccch---HHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 043297          168 EALELREKG-ISNL---GAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSV  243 (505)
Q Consensus       168 ~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  243 (505)
                      .+++..... ....   ...+...+...+.......+...+|++.+++.....+...+....+.+++...+++++++.. 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA-  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            987654321 0000   12233334444443333334456777666633223333433444556788888887776531 


Q ss_pred             cccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhH
Q 043297          244 VEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRV  323 (505)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~  323 (505)
                               . .....|+++.|++..      ..++++++.+++.++++   ||+     |||+++++|++++|++||++
T Consensus       240 ---------~-~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~---ag~-----dtta~~l~~~~~~l~~~p~~  295 (466)
T PLN02655        240 ---------R-GEERDCYLDFLLSEA------THLTDEQLMMLVWEPII---EAA-----DTTLVTTEWAMYELAKNPDK  295 (466)
T ss_pred             ---------C-CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHH---HHH-----HHHHHHHHHHHHHHHcCHHH
Confidence                     1 123468999999764      24899999999999999   999     99999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhccCCC
Q 043297          324 MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQ  402 (505)
Q Consensus       324 q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~  402 (505)
                      |+++|+||+++++.+. +++++++++|||+|||+||||++| ++...+|.+.+|++++||.|||||.|+++.+++||||+
T Consensus       296 ~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~  374 (466)
T PLN02655        296 QERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKK  374 (466)
T ss_pred             HHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcc
Confidence            9999999999998644 899999999999999999999999 77767899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCccccc
Q 043297          403 IWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGI  482 (505)
Q Consensus       403 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  482 (505)
                      +|+||++|+||||+++...     ......++|||.|+|.|||++||+.|++++++.|+.+|++++.++.. +.....++
T Consensus       375 ~~~~p~~F~PeR~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~  448 (466)
T PLN02655        375 RWENPEEWDPERFLGEKYE-----SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQL  448 (466)
T ss_pred             cCCChhccCccccCCCCcc-----cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhhe
Confidence            9999999999999953211     11235899999999999999999999999999999999999976632 12234567


Q ss_pred             eeccCCCeeEeeecCCC
Q 043297          483 LIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       483 ~~~~~~~~~v~~~~r~~  499 (505)
                      +..++.++.|++++|.+
T Consensus       449 ~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        449 TTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             eEeecCCcEEEEeecCC
Confidence            77788899999999975


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=9.2e-71  Score=562.92  Aligned_cols=427  Identities=22%  Similarity=0.352  Sum_probs=335.1

Q ss_pred             HHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccceeecCCCceecCCCChhHHHHHHHHHHHhc
Q 043297           33 TELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLM  112 (505)
Q Consensus        33 ~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f  112 (505)
                      .+|+++||++|++|+|+.++|+|+||+++++|+.++. .+..++...........|.+++++ +|+.|+++||.++ +.|
T Consensus        87 ~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~~-~~~~r~~~~~~~~~~~~g~~l~~~-~g~~Wk~~Rk~~~-~~f  163 (516)
T PLN02290         87 VAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKYN-TVTGKSWLQQQGTKHFIGRGLLMA-NGADWYHQRHIAA-PAF  163 (516)
T ss_pred             HHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcCC-CCCCCcchhhhHHHHHhcCCcccc-CchHHHHHHhhcc-ccc
Confidence            4578999999999999999999999999999999874 343343211111111235566554 6999999999997 899


Q ss_pred             chhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHH
Q 043297          113 SNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLAELV  192 (505)
Q Consensus       113 ~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~  192 (505)
                      +.++++.+.+.+.++++.+++.|.+.... ++..+|+.+++..+++|++++++||.+++...        ++...+..+.
T Consensus       164 ~~~~l~~~~~~i~~~~~~l~~~l~~~~~~-~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~--------~~~~~~~~~~  234 (516)
T PLN02290        164 MGDRLKGYAGHMVECTKQMLQSLQKAVES-GQTEVEIGEYMTRLTADIISRTEFDSSYEKGK--------QIFHLLTVLQ  234 (516)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEhHHHHHHHHHHHHHHHHcCCccccch--------HHHHHHHHHH
Confidence            99999999999999999999999764331 23579999999999999999999999875321        1222222222


Q ss_pred             HhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhccc
Q 043297          193 VLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENE  272 (505)
Q Consensus       193 ~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  272 (505)
                      ...........+|++.++ +.+..+..+...+.+.+++.+.|+++++..+...       . .....|+++.++++.+++
T Consensus       235 ~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~-~~~~~d~l~~ll~~~~~~  305 (516)
T PLN02290        235 RLCAQATRHLCFPGSRFF-PSKYNREIKSLKGEVERLLMEIIQSRRDCVEIGR-------S-SSYGDDLLGMLLNEMEKK  305 (516)
T ss_pred             HHHHHhhhhhcCchhhhC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------C-CCCCCCHHHHHHHhcccc
Confidence            221111111234544444 2233455666778888999999988876541100       0 123579999999865432


Q ss_pred             -CCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChh
Q 043297          273 -DSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKY  351 (505)
Q Consensus       273 -~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~  351 (505)
                       .++..++++++.+++.++++   ||+     |||+++++|++++|++||++|+++|+||+++++.+ .++++++++|||
T Consensus       306 ~~~~~~l~~~~i~~~~~~~~~---AG~-----dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpY  376 (516)
T PLN02290        306 RSNGFNLNLQLIMDECKTFFF---AGH-----ETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTL  376 (516)
T ss_pred             CCCCCCCCHHHHHHHHHHHHh---hhH-----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChH
Confidence             12335889999999999999   999     99999999999999999999999999999999854 789999999999


Q ss_pred             HHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhccCCCCC-CCCCCCCCcccccCCCCCCccccCC
Q 043297          352 LDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGN  429 (505)
Q Consensus       352 l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~  429 (505)
                      |+|||+||||++| ++. ++|.+.+|++++||.||+||.|.++.+++||||++| +||++|+||||++.+       ...
T Consensus       377 l~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~-------~~~  448 (516)
T PLN02290        377 LNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP-------FAP  448 (516)
T ss_pred             HHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC-------CCC
Confidence            9999999999999 765 799999999999999999999999999999999999 899999999999421       112


Q ss_pred             CCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCccccceeccCCCeeEeeecCCC
Q 043297          430 NFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       430 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      ...|+|||.|+|.|+|++||++|++++++.|+++|++++.++.+.  ....+++..|+.++.|++++|++
T Consensus       449 ~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        449 GRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRH--APVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             CCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCccc--CccceeeecCCCCCeEEEEeCCC
Confidence            347999999999999999999999999999999999998766322  12235778888999999999975


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.2e-70  Score=517.50  Aligned_cols=447  Identities=24%  Similarity=0.342  Sum_probs=372.5

Q ss_pred             cCCCCCCCCCCCc------------------chHHHHHhhCCeEEEe-cCCeeEEEecCHHHHHHHHHhcCcccccCC-C
Q 043297           18 ANAKLPPGPRGLP------------------TFTELAGVYGPIFKLW-LGKKLCVVVSSPSLVKQVVRDQDITFANRD-P   77 (505)
Q Consensus        18 ~~~~~~Pgp~~~p------------------~~~~~~~kyG~v~~~~-~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~-~   77 (505)
                      ++...+|||+++|                  ....++++|||||+.. +|+...|++.+|++++.++++++. .+-++ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccc
Confidence            4678899999999                  4556689999999999 889999999999999999999873 23342 1


Q ss_pred             Ccccc-e-eecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhcc-CCCCCccchhhhHH
Q 043297           78 PIAGL-V-ASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNK-TGIGKPIDVGELSI  154 (505)
Q Consensus        78 ~~~~~-~-~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vd~~~~~~  154 (505)
                      ...+. . ..+++...+++..|++|.+.|..+++.+++++.++.|.+.++..+++++..+....+ .....+.|+.+.+.
T Consensus       126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY  205 (519)
T ss_pred             cchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence            11111 1 112233345556799999999999988999999999999999999999999987654 12445789999999


Q ss_pred             HHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhcccccccc-ccccccccccHHHHHHHHHHHHHHHHHHH
Q 043297          155 STFVCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDII-PVLSWLDIQGIEKRTKKISLCFENFIDSA  233 (505)
Q Consensus       155 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~l~~~~~~~~~~~~~~~~~~~~~~~  233 (505)
                      +++++.||.++||.+++.+....++....+..++..++.......   +. ++++++ ..+.+++.-++.+.+.+++...
T Consensus       206 ~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~  281 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKY  281 (519)
T ss_pred             HHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhC-CChHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999987666778889999998887665443   33 455555 4556788999999999999999


Q ss_pred             HHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHH
Q 043297          234 VEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWT  313 (505)
Q Consensus       234 i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~  313 (505)
                      |+...++.+..+       ....+..+++..++..       ..++.+++..++.++++   ||.     ||||.++.|+
T Consensus       282 Id~~l~~l~~~~-------~~~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~---aGv-----DTTs~tl~~~  339 (519)
T KOG0159|consen  282 IDNALEELEKQD-------SAGSEYTGSLLELLLR-------KELSRKDAKANVMDLLA---AGV-----DTTSNTLLWA  339 (519)
T ss_pred             HHHHHHHHHhcc-------ccccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHH---Hhc-----cchHHHHHHH
Confidence            999988874322       1012334455555543       24778999999999999   999     9999999999


Q ss_pred             HHHHhhChhHHHHHHHHHHHhhCC-CCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEE
Q 043297          314 MTELMHNPRVMKKVQEELAQVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTII  391 (505)
Q Consensus       314 l~~L~~~p~~q~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~  391 (505)
                      ||+|++||++|++|++|+.++.+. +..++.+++.+||||.||||||||||| +|+ +.|...+|.+++||.|||||.|.
T Consensus       340 Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~  418 (519)
T KOG0159|consen  340 LYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVV  418 (519)
T ss_pred             HHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEE
Confidence            999999999999999999999987 677899999999999999999999999 665 77999999999999999999999


Q ss_pred             eechhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCC
Q 043297          392 LNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAG  471 (505)
Q Consensus       392 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~  471 (505)
                      +..+.+.+||++|++|++|+|||||+++.     ...+++.++|||.|+|+|+|+++|++||-++||+++++|+++...+
T Consensus       419 l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-----~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~  493 (519)
T KOG0159|consen  419 LFLYVLGRNPAYFPDPEEFLPERWLKPST-----KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE  493 (519)
T ss_pred             EeehhhccChhhCCCccccChhhhccccc-----CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC
Confidence            99999999999999999999999997532     2457889999999999999999999999999999999999999876


Q ss_pred             CccccCccccceeccCCCeeEeeecCCC
Q 043297          472 TKLDLSEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      .+++  ....+++.|..++..++++|.+
T Consensus       494 ~pv~--~~~~~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  494 EPVE--YVYRFILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             CCcc--ceeEEEEcCCCCcceeeeeCCC
Confidence            4444  4466778898999999999864


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.5e-69  Score=548.90  Aligned_cols=465  Identities=27%  Similarity=0.460  Sum_probs=345.2

Q ss_pred             CCCCCCCCCCCcc----------------hHHHHHhh-CCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCccc
Q 043297           19 NAKLPPGPRGLPT----------------FTELAGVY-GPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   81 (505)
Q Consensus        19 ~~~~~Pgp~~~p~----------------~~~~~~ky-G~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~   81 (505)
                      ..+.||||+++|+                ++++.++| |+||++|+|++++|+|+||+.+++++.+++..|.+++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            4568999999991                23445556 799999999999999999999999999887778877644333


Q ss_pred             ceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHH
Q 043297           82 LVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVI  161 (505)
Q Consensus        82 ~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi  161 (505)
                      .....++.++++..+|+.|+++||++++.+++......+...+..+++.+++.+.+..+  .+.++|+.+.+..+++|++
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~t~~vi  195 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ--RSETVDVRELSRVYGYAVT  195 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCceeHHHHHHHHHHHHH
Confidence            32222233567776799999999999833345555555555666778899999976433  4557999999999999999


Q ss_pred             HHHHhhhhhhhhhccC---cchHHHHHHHHHHHHHhhh---ccccccccc-cccccccccHHHHHHHHHHHHHHHHHHHH
Q 043297          162 QNMLWGEALELREKGI---SNLGAELKFKLAELVVLMG---TQNISDIIP-VLSWLDIQGIEKRTKKISLCFENFIDSAV  234 (505)
Q Consensus       162 ~~~~fG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i  234 (505)
                      ++++||.+++......   ......+...+........   .....+.+| |+.++...+...+.......+.+++..++
T Consensus       196 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  275 (534)
T PLN03018        196 MRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPII  275 (534)
T ss_pred             HHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            9999999986432110   0111112222222222111   111123334 44322122233445555667788888888


Q ss_pred             HHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHH
Q 043297          235 EQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTM  314 (505)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l  314 (505)
                      +++++.... +       .......|+++.|++..+++ ....++++++..++.++++   ||+     |||+++++|++
T Consensus       276 ~~~~~~~~~-~-------~~~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~~~~---aG~-----dTta~~l~~~l  338 (534)
T PLN03018        276 DERVELWRE-K-------GGKAAVEDWLDTFITLKDQN-GKYLVTPDEIKAQCVEFCI---AAI-----DNPANNMEWTL  338 (534)
T ss_pred             HHHHHHhhh-c-------cCCCCcccHHHHHHHhhccc-CCCCCCHHHHHHHHHHHHH---Hhh-----hHHHHHHHHHH
Confidence            887754310 0       00113469999999876431 1124899999999999999   999     99999999999


Q ss_pred             HHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEee
Q 043297          315 TELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILN  393 (505)
Q Consensus       315 ~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~  393 (505)
                      ++|++||++|+++++||+++++.++.++.+++.+||||+|||+||||++| ++...+|.+.+|++++||.|||||.|+++
T Consensus       339 ~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~  418 (534)
T PLN03018        339 GEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVC  418 (534)
T ss_pred             HHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEC
Confidence            99999999999999999999987777899999999999999999999999 77766799999999999999999999999


Q ss_pred             chhhccCCCCCCCCCCCCCcccccCCCCC-CccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC
Q 043297          394 VWAIHRDPQIWDNPLEFGPEKFLNDGIAS-KFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGT  472 (505)
Q Consensus       394 ~~~~~~d~~~~~~p~~F~P~R~l~~~~~~-~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~  472 (505)
                      .+++|+||++|+||++|+||||+++++.. .......+..|+|||.|+|.|||++||++|+++++|.|+++|++++.++.
T Consensus       419 ~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  498 (534)
T PLN03018        419 RPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF  498 (534)
T ss_pred             hHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC
Confidence            99999999999999999999999643211 11111244689999999999999999999999999999999999987663


Q ss_pred             -ccccCccccceeccCCCeeEeeecCCCCCCcc
Q 043297          473 -KLDLSEKFGILIKKKEPLVAIPTPRLPNSELY  504 (505)
Q Consensus       473 -~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~~~  504 (505)
                       .++.....+.+..| .++.|+++||... +||
T Consensus       499 ~~~~~~~~~~~~~~p-~~~~v~~~~R~~~-~~~  529 (534)
T PLN03018        499 GPLSLEEDDASLLMA-KPLLLSVEPRLAP-NLY  529 (534)
T ss_pred             CCCCccccccceecC-CCeEEEEEecccc-ccc
Confidence             33333233444444 6899999999554 665


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.3e-70  Score=552.80  Aligned_cols=442  Identities=29%  Similarity=0.503  Sum_probs=352.8

Q ss_pred             CCCCCCCCCCCc-----------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCccc
Q 043297           19 NAKLPPGPRGLP-----------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   81 (505)
Q Consensus        19 ~~~~~Pgp~~~p-----------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~   81 (505)
                      ..+.||||+++|                 ++.++..+||++|+.|+||.++|+++||+.+++|+.++.....+...+.. 
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~-  111 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE-  111 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH-
Confidence            568899999999                 77788899999999999999999999999999999755433433332221 


Q ss_pred             ceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHH
Q 043297           82 LVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVI  161 (505)
Q Consensus        82 ~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi  161 (505)
                      ......|.|++++. |+.|+++||+++ +.|+...++.+...+.+.+..++..+....   .++.+|+.+.++++++|+|
T Consensus       112 ~~~~~lG~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~---~~~~vd~~~~~~~~tld~i  186 (497)
T KOG0157|consen  112 SLKPWLGDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAA---SGEEVDLQDLLKRLTLDII  186 (497)
T ss_pred             HHHHHhcCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCeEcHHHHHHHHHHHHH
Confidence            11123477888887 999999999997 999999999999999999998888887643   2333999999999999999


Q ss_pred             HHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccc-cccccccccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043297          162 QNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIP-VLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNK  240 (505)
Q Consensus       162 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (505)
                      +.++||........   +...++..++..........   ...| +..++...+..++..++.+.++++++++|+++++.
T Consensus       187 ~~~~~G~~~~~~~~---~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~  260 (497)
T KOG0157|consen  187 CKTAMGPESLDAEG---PELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREE  260 (497)
T ss_pred             HHHhcCCccccccC---CcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999922211111   23345666666555444322   2344 33333222356788899999999999999999987


Q ss_pred             hhhcccCCCCCCCC-CCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhh
Q 043297          241 VSVVEGEGGAGNNI-EGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMH  319 (505)
Q Consensus       241 ~~~~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~  319 (505)
                      .+..+       .. .....|+++.+....+     ..++++++++++.+|++   ||+     ||||++++|++++|+.
T Consensus       261 ~~~~~-------~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~f---aG~-----DTTss~ltw~l~~La~  320 (497)
T KOG0157|consen  261 LEKEG-------SGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMF---AGH-----DTTSSALTWTLWLLAK  320 (497)
T ss_pred             HHhcC-------CcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHhee---ecc-----chHHHHHHHHHHHHhc
Confidence            53211       10 1356788886333222     46999999999999999   999     9999999999999999


Q ss_pred             ChhHHHHHHHHHHHhhCCCCC-cccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccc-cceecCCCCEEEeechh
Q 043297          320 NPRVMKKVQEELAQVVGMDSC-VEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSI-GGYTVPKDTTIILNVWA  396 (505)
Q Consensus       320 ~p~~q~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l-~g~~ip~Gt~v~~~~~~  396 (505)
                      ||++|+++++|++++++.... .+..+.++|+||++||+||||||| +|. +.|.+.+|+++ +||.||||+.|.+++++
T Consensus       321 hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~  399 (497)
T KOG0157|consen  321 HPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYA  399 (497)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHH
Confidence            999999999999999985332 233333369999999999999999 776 77999999999 58999999999999999


Q ss_pred             hccCCCCCC-CCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccc
Q 043297          397 IHRDPQIWD-NPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLD  475 (505)
Q Consensus       397 ~~~d~~~~~-~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~  475 (505)
                      +|||+++|+ ||++|+||||++++...    ..++.+|+|||+|||.|+|++||++|+|++++.++++|++++..+..  
T Consensus       400 ~~r~~~~~~~dp~~F~PeRf~~~~~~~----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--  473 (497)
T KOG0157|consen  400 LHRDPRVWGEDPEEFDPERFLDGEEKA----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--  473 (497)
T ss_pred             hccCccccCCChhhcCccccCCCCCcC----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--
Confidence            999999996 99999999999642221    34678999999999999999999999999999999999999987743  


Q ss_pred             cCccccceeccCCCeeEeeecCCC
Q 043297          476 LSEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       476 ~~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      ..+...++.+++.+++|+++||..
T Consensus       474 ~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  474 PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             ceeeeEEEEEecCCeEEEEEeCCC
Confidence            455678899999999999999963


No 18 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.4e-69  Score=549.90  Aligned_cols=439  Identities=34%  Similarity=0.594  Sum_probs=355.1

Q ss_pred             CCCCCCCc----------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccce--e
Q 043297           23 PPGPRGLP----------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV--A   84 (505)
Q Consensus        23 ~Pgp~~~p----------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~--~   84 (505)
                      ||||+++|                ++.+++++||+||+++++++++++|+||+.+++|+.++...+..+........  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999                68899999999999999999999999999999999998766665432222211  1


Q ss_pred             ecCCCceecCCCChhHHHHHHHHHHHhcchh-hHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHH
Q 043297           85 SFGGNDILFSNYGPEWRKLRKLFVGKLMSNA-SLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQN  163 (505)
Q Consensus        85 ~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~  163 (505)
                      ...|.++++. +|+.|+.+|++++ +.|+.. .+ .+.+.+.+.++.+++.|.+...  .++.+|+.++++.+++|++++
T Consensus        81 ~~~~~~l~~~-~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   81 PFGGKGLFFS-DGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG--SSGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHTTTSSTTS-SHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT--SESEEEHHHHHHHHHHHHHHH
T ss_pred             cccccccccc-ccccccccccccc-ccccccccc-cccccccccccccccccccccc--ccceeeeeccccccccccccc
Confidence            2346666655 4899999999998 777777 66 8999999999999999998764  334799999999999999999


Q ss_pred             HHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhc--cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043297          164 MLWGEALELREKGISNLGAELKFKLAELVVLMGT--QNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKV  241 (505)
Q Consensus       164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  241 (505)
                      ++||.+++....   +...++.+.+..+......  ..+...+|++.++ +....+...++.+.+.+++...++++++..
T Consensus       156 ~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (463)
T PF00067_consen  156 VLFGKDFGSLDD---EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREEL  231 (463)
T ss_dssp             HHHSSHHHGTTH---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             ccccceeeeccc---cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence            999999885544   2234566666666554422  1234456666655 344567777788899999999999998876


Q ss_pred             hhcccCCCCCCCCCCCcchHHHHHHhhh-cccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhC
Q 043297          242 SVVEGEGGAGNNIEGRNKDFLQLLLELQ-ENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHN  320 (505)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~  320 (505)
                      ..          ......|+++.+++.. +.+ .+..++++++..++..+++   ||+     |||+.+++|++++|++|
T Consensus       232 ~~----------~~~~~~d~l~~ll~~~~~~~-~~~~ls~~~i~~~~~~~~~---ag~-----dtt~~~l~~~l~~L~~~  292 (463)
T PF00067_consen  232 DD----------GDESRRDLLDSLLQASSDSD-GPSGLSDEEIAAELLTLLF---AGH-----DTTASTLSWTLYELAKN  292 (463)
T ss_dssp             HS----------SSSSCSSHHHHHHHHHHTTT-TTSSSSHHHHHHHHHHHHH---HHH-----HHHHHHHHHHHHHHHHS
T ss_pred             cc----------cccccccccccccccccccc-ccccccccccccccccccc---ccc-----ccccccccccccccccc
Confidence            21          0236789999999987 331 1247999999999999999   999     99999999999999999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhcc
Q 043297          321 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  399 (505)
Q Consensus       321 p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~  399 (505)
                      |++|+++++||+++++.+..++.+++++||||+|||+||||++| ++..++|.+.+|++++||.||+||.|+++.+++|+
T Consensus       293 P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~  372 (463)
T PF00067_consen  293 PEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHR  372 (463)
T ss_dssp             HHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999977778999999999999999999999999 77568899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCcc
Q 043297          400 DPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEK  479 (505)
Q Consensus       400 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  479 (505)
                      ||++|+||++|+||||++++.    ....+...|+|||.|+|.|||++||+.|+++++|.|+++||+++.++........
T Consensus       373 d~~~~~dp~~F~P~R~~~~~~----~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~  448 (463)
T PF00067_consen  373 DPEYFPDPDEFDPERFLDERG----ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQ  448 (463)
T ss_dssp             STTTSSSTTS--TTGGBTTTS----TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEEC
T ss_pred             ccccccccccccccccccccc----ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccc
Confidence            999999999999999996432    1124566999999999999999999999999999999999999987644433222


Q ss_pred             c-cceeccCCCeeEee
Q 043297          480 F-GILIKKKEPLVAIP  494 (505)
Q Consensus       480 ~-~~~~~~~~~~~v~~  494 (505)
                      . +++. |+.++.|++
T Consensus       449 ~~~~~~-~~~~~~~~~  463 (463)
T PF00067_consen  449 QNGFLL-PPKPLKVKF  463 (463)
T ss_dssp             SCSSSE-EESSSEEEE
T ss_pred             cCceEe-eCCCcEEeC
Confidence            2 3433 444566654


No 19 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.1e-68  Score=541.65  Aligned_cols=426  Identities=20%  Similarity=0.326  Sum_probs=324.2

Q ss_pred             cCCCCCCCCCCCc-------------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCC
Q 043297           18 ANAKLPPGPRGLP-------------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPP   78 (505)
Q Consensus        18 ~~~~~~Pgp~~~p-------------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~   78 (505)
                      .+.+.||||+++|                   ++.+++++||+||++++|++++|+|+||+++++|+.+++..|..+...
T Consensus        35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~  114 (490)
T PLN02500         35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR  114 (490)
T ss_pred             CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence            3678899999999                   134567899999999999999999999999999999887666544222


Q ss_pred             cccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhH-hhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHH
Q 043297           79 IAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDA-CYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTF  157 (505)
Q Consensus        79 ~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~  157 (505)
                      .....  .++.++++. +|+.|+++||+++ +.|++.+++. +.+.+.+.+..+++.+.      .++.+|+.+.+..++
T Consensus       115 ~~~~~--~g~~~~~~~-~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~vd~~~~~~~~~  184 (490)
T PLN02500        115 SIGGI--LGKWSMLVL-VGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK------ENSTFSAQDEAKKFT  184 (490)
T ss_pred             HHHHH--hCccccccc-CCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC------CCCCEEehHHHHHHH
Confidence            11111  122345544 6999999999997 8999988876 46677777777777664      345799999999999


Q ss_pred             HHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 043297          158 VCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQY  237 (505)
Q Consensus       158 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  237 (505)
                      +|++++++||.+.+...      ...+...+.........  ....+|..       ..++..+..+.+.+++.+.++++
T Consensus       185 ~~vi~~~~fg~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        185 FNLMAKHIMSMDPGEEE------TEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHHHHhCCCCCchH------HHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998754321      12233333332221111  00112221       12344556778888888888887


Q ss_pred             HhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHH
Q 043297          238 RNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTEL  317 (505)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L  317 (505)
                      ++..+. +       .......|+++.+++.       ..++++++.+++.++++   ||+     |||+++++|++++|
T Consensus       250 ~~~~~~-~-------~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~---AG~-----dTta~tl~~~l~~L  306 (490)
T PLN02500        250 IEKLKE-E-------DESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLF---AGH-----ETSSVAIALAIFFL  306 (490)
T ss_pred             HHhhhc-c-------cCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHH---hhh-----hHHHHHHHHHHHHH
Confidence            764311 0       0011346999999974       24889999999999999   999     99999999999999


Q ss_pred             hhChhHHHHHHHHHHHhhC-----CCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEE
Q 043297          318 MHNPRVMKKVQEELAQVVG-----MDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTII  391 (505)
Q Consensus       318 ~~~p~~q~~lr~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~  391 (505)
                      ++||++|+|+|+||+++++     .+..++++|+++||||+|||+||||++| ++. ++|.+.+|++++||.|||||.|+
T Consensus       307 ~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~  385 (490)
T PLN02500        307 QGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVL  385 (490)
T ss_pred             hhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEE
Confidence            9999999999999999874     2345799999999999999999999999 776 67999999999999999999999


Q ss_pred             eechhhccCCCCCCCCCCCCCcccccCCCCCCcc--ccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecC
Q 043297          392 LNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFD--YSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLP  469 (505)
Q Consensus       392 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~  469 (505)
                      ++.+++||||++|+||++|+||||+++++.....  ...++.+|+|||.|+|.|||++||++|+++++|.|+++|++++.
T Consensus       386 ~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~  465 (490)
T PLN02500        386 PVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELA  465 (490)
T ss_pred             echhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEc
Confidence            9999999999999999999999999643211100  01234589999999999999999999999999999999999987


Q ss_pred             CCCccccCccccceeccCCCeeEeeec
Q 043297          470 AGTKLDLSEKFGILIKKKEPLVAIPTP  496 (505)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~~~~v~~~~  496 (505)
                      ++....  . ...+ .++.++.|++++
T Consensus       466 ~~~~~~--~-~~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        466 EADQAF--A-FPFV-DFPKGLPIRVRR  488 (490)
T ss_pred             CCCcce--e-cccc-cCCCCceEEEEe
Confidence            663321  1 1122 334688888875


No 20 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.3e-68  Score=547.51  Aligned_cols=436  Identities=25%  Similarity=0.423  Sum_probs=332.5

Q ss_pred             chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccceeecCCCceecCCCChhHHHHHHHHHHH
Q 043297           31 TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGK  110 (505)
Q Consensus        31 ~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~  110 (505)
                      .+.+||+||||||++++|+.++|+|+||+.+++|+.++...|.+........  ...|.+++ +.+|+.|+.+|+.++ +
T Consensus       156 ~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~--~~~g~~l~-~~dge~wr~rRr~l~-p  231 (633)
T PLN02738        156 PLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILE--FVMGKGLI-PADGEIWRVRRRAIV-P  231 (633)
T ss_pred             HHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHh--hccCCcee-cCCcHHHHHHHHhcc-H
Confidence            7889999999999999999999999999999999998765666543221111  11255555 456999999999997 9


Q ss_pred             hcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHH
Q 043297          111 LMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLAE  190 (505)
Q Consensus       111 ~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  190 (505)
                      .|+...+..+.+.+.+.++.+++.|.+...  .++.+|+.+.+..+++|+|+.++||.+++...++     ..+...+..
T Consensus       232 ~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~--~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-----~~~~~~~~~  304 (633)
T PLN02738        232 ALHQKYVAAMISLFGQASDRLCQKLDAAAS--DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-----TGIVEAVYT  304 (633)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-----hHHHHHHHH
Confidence            999999999999999999999999986544  5778999999999999999999999998754321     123333333


Q ss_pred             HHHhhhccccccc----cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHH
Q 043297          191 LVVLMGTQNISDI----IPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLL  266 (505)
Q Consensus       191 ~~~~~~~~~~~~~----~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll  266 (505)
                      .+..........+    +|.+..+  ....++..+..+.+..++..+++.+++..+....... .+.......|+++.|+
T Consensus       305 ~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~-~~~~~~~~~dil~~Ll  381 (633)
T PLN02738        305 VLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFH-EEYMNERDPSILHFLL  381 (633)
T ss_pred             HHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccch-hcccccccchHHHHHH
Confidence            3222111111111    2222222  1122344455566666666666654432211010000 0000123468999999


Q ss_pred             hhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccC
Q 043297          267 ELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHL  346 (505)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l  346 (505)
                      +..      ..++++++.+++.++++   ||+     |||+++|+|++++|++||++|+|||+||+++++ +..++++++
T Consensus       382 ~~~------~~ls~~~L~~e~~~ll~---AG~-----eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL  446 (633)
T PLN02738        382 ASG------DDVSSKQLRDDLMTMLI---AGH-----ETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDM  446 (633)
T ss_pred             HcC------CCCCHHHHHHHHHHHHh---cCC-----ccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHH
Confidence            753      24889999999999999   999     999999999999999999999999999999998 467899999


Q ss_pred             CCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhccCCCCCCCCCCCCCcccccCCCCCCcc
Q 043297          347 PKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFD  425 (505)
Q Consensus       347 ~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  425 (505)
                      ++||||+|||+|+|||+| ++. ++|.+.+|.+++||.||+||.|.++.+.+||||++||||++|+||||+.++...  .
T Consensus       447 ~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~--~  523 (633)
T PLN02738        447 KKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNP--N  523 (633)
T ss_pred             ccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCc--c
Confidence            999999999999999999 776 669999999999999999999999999999999999999999999998431111  1


Q ss_pred             ccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCccccceeccCCCeeEeeecCCC
Q 043297          426 YSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       426 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      .......|+|||.|+|.|+|++||++|++++||.|+++|++++.++.. +.....+.++.+..++.|++++|..
T Consensus       524 ~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        524 ETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             ccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence            122455899999999999999999999999999999999999987632 2222345667777899999999954


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.4e-68  Score=537.11  Aligned_cols=439  Identities=18%  Similarity=0.307  Sum_probs=331.0

Q ss_pred             CCCCCCCCCCc-------------chHHHH----HhhCCeEE---EecCCeeEEEecCHHHHHHHHHhcCcccccCCCCc
Q 043297           20 AKLPPGPRGLP-------------TFTELA----GVYGPIFK---LWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPI   79 (505)
Q Consensus        20 ~~~~Pgp~~~p-------------~~~~~~----~kyG~v~~---~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~   79 (505)
                      .+..|||+++|             .+.++.    .+||..++   .|+|+.|+|+|+||+.+++|+.++...|.+.....
T Consensus        30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~  109 (500)
T PLN02169         30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK  109 (500)
T ss_pred             cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence            34689999999             222333    44786655   68899999999999999999998766666553221


Q ss_pred             ccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHh--hHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHH
Q 043297           80 AGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDAC--YALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTF  157 (505)
Q Consensus        80 ~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~  157 (505)
                        ......|+|++++ +|+.|+++||+++ +.|+...+..+  .+.+.+.++.+++.+.+...  .++++|+.+.+..++
T Consensus       110 --~~~~~~g~gl~~~-~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~t  183 (500)
T PLN02169        110 --KIFDVLGEGILTV-DFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH--ENIIIDLQDVFMRFM  183 (500)
T ss_pred             --HHHHhhcCccccc-CcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCeEeHHHHHHHHH
Confidence              1112236777766 5999999999997 99998877642  36677778888888875443  567899999999999


Q ss_pred             HHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhcccccccccccc-----ccccccHHHHHHHHHHHHHHHHHH
Q 043297          158 VCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLS-----WLDIQGIEKRTKKISLCFENFIDS  232 (505)
Q Consensus       158 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~l~~~~~~~~~~~~~~~~~~~~~~  232 (505)
                      +|+|++++||.+.+..+..  ....++...+........   .....|++.     ++ ..+..++..++.+.+.+++.+
T Consensus       184 ~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  257 (500)
T PLN02169        184 FDTSSILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWI-GIGLERKMRTALATVNRMFAK  257 (500)
T ss_pred             HHHHHhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHh-CCchhhHHHHHHHHHHHHHHH
Confidence            9999999999987643321  111234444333332211   112233321     11 123356677888899999999


Q ss_pred             HHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhccc-CCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHH
Q 043297          233 AVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENE-DSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVE  311 (505)
Q Consensus       233 ~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~  311 (505)
                      +|+++++.... .     . ..++...|+++.+++....+ ..+..++++++.+++.++++   ||+     |||+++++
T Consensus       258 ~I~~r~~~~~~-~-----~-~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~---AG~-----dTTa~tl~  322 (500)
T PLN02169        258 IISSRRKEEIS-R-----A-ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVL---AGR-----DTTSSALT  322 (500)
T ss_pred             HHHHHHHHhhc-c-----c-cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHH---hch-----hHHHHHHH
Confidence            99888764210 0     0 00112478999999864321 01234788899999999999   999     99999999


Q ss_pred             HHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCccc-ccceecCCCCE
Q 043297          312 WTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSS-IGGYTVPKDTT  389 (505)
Q Consensus       312 ~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~-l~g~~ip~Gt~  389 (505)
                      |++|+|++||++|+|+++||++++      +++++++||||+|||+||||++| +|. +.|.+.+|.+ ++|+.|||||.
T Consensus       323 w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~-~~r~~~~d~~~~~G~~IpkGt~  395 (500)
T PLN02169        323 WFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPF-NHKAPAKPDVLPSGHKVDAESK  395 (500)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCc-CceecCCCCCccCCEEECCCCE
Confidence            999999999999999999999874      57899999999999999999999 777 4576666655 59999999999


Q ss_pred             EEeechhhccCCCCC-CCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceec
Q 043297          390 IILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKL  468 (505)
Q Consensus       390 v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~  468 (505)
                      |.+++|++||||++| +||++|+||||+++++...   ...+.+|+|||.|+|.|||++||++|++++++.|+++|++++
T Consensus       396 v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~---~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~  472 (500)
T PLN02169        396 IVICIYALGRMRSVWGEDALDFKPERWISDNGGLR---HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKV  472 (500)
T ss_pred             EEEcHHHhhCCccccCCChhhcCccccCCCCCCcc---CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEE
Confidence            999999999999999 8999999999996422111   123568999999999999999999999999999999999999


Q ss_pred             CCCCccccCccccceeccCCCeeEeeecC
Q 043297          469 PAGTKLDLSEKFGILIKKKEPLVAIPTPR  497 (505)
Q Consensus       469 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  497 (505)
                      .++..+.  ...++++.|+.++.|++++|
T Consensus       473 ~~~~~~~--~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        473 IEGHKIE--AIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             cCCCCcc--cccceEEecCCCEEEEEEeC
Confidence            7654432  34557788889999999987


No 22 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=3e-67  Score=528.99  Aligned_cols=415  Identities=19%  Similarity=0.290  Sum_probs=324.9

Q ss_pred             CCCCCCCCCCCc--------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCccccee
Q 043297           19 NAKLPPGPRGLP--------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVA   84 (505)
Q Consensus        19 ~~~~~Pgp~~~p--------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~   84 (505)
                      +.+.||||+++|              ++++++++||++|++|+|++++++|+||+++++|+.++...|........... 
T Consensus        29 r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~-  107 (463)
T PLN02774         29 KKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI-  107 (463)
T ss_pred             CCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH-
Confidence            457899999988              66788999999999999999999999999999999987666643322211111 


Q ss_pred             ecCCCceecCCCChhHHHHHHHHHHHhcchhhHhH-hhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHH
Q 043297           85 SFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDA-CYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQN  163 (505)
Q Consensus        85 ~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~  163 (505)
                       + |.+.+++.+|+.|+++|++++ +.|++..++. +.+.+.+.++++++.+.      .++++|+.+.+..+++++++.
T Consensus       108 -l-g~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        108 -L-GTCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD------GLKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             -h-CccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC------CCCCEEeeHHHHHHHHHHHHH
Confidence             2 333334457999999999997 8999998875 67888888888887764      345799999999999999999


Q ss_pred             HHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 043297          164 MLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSV  243 (505)
Q Consensus       164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  243 (505)
                      ++||...+...       .++...+..+..  ...    .+|.  ++ +....++..++.+.+.+++.+.++++++..  
T Consensus       179 ~~~g~~~~~~~-------~~~~~~~~~~~~--~~~----~~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--  240 (463)
T PLN02774        179 QIAGTLSKPIS-------EEFKTEFFKLVL--GTL----SLPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERRASG--  240 (463)
T ss_pred             HHcCCCChHHH-------HHHHHHHHHHhc--ccc----cCCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            99997653221       122222222111  111    1121  11 111234555677888888888888876432  


Q ss_pred             cccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhH
Q 043297          244 VEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRV  323 (505)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~  323 (505)
                                  ....|+++.|++...   ++..++++++.+++.++++   ||+     |||+++++|++++|++||++
T Consensus       241 ------------~~~~d~l~~ll~~~~---~~~~~s~~ei~~~~~~ll~---Ag~-----dTt~~~l~w~l~~L~~~P~~  297 (463)
T PLN02774        241 ------------ETHTDMLGYLMRKEG---NRYKLTDEEIIDQIITILY---SGY-----ETVSTTSMMAVKYLHDHPKA  297 (463)
T ss_pred             ------------CCcccHHHHHHhCcc---CCCCCCHHHHHHHHHHHHH---hcc-----hhHHHHHHHHHHHHHcCHHH
Confidence                        134799999997432   2345899999999999999   999     99999999999999999999


Q ss_pred             HHHHHHHHHHhhCC---CCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhcc
Q 043297          324 MKKVQEELAQVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  399 (505)
Q Consensus       324 q~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~  399 (505)
                      |+++++|++++++.   +..++++++++||||+|||+||||++| ++. +.|.+.+|++++||.||||+.|+++.+.+||
T Consensus       298 q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~r  376 (463)
T PLN02774        298 LQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINY  376 (463)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcC
Confidence            99999999999863   346789999999999999999999999 664 6799999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCcc
Q 043297          400 DPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEK  479 (505)
Q Consensus       400 d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  479 (505)
                      ||++|+||++|+||||++++   .   ..+ ..|+|||.|+|.|||++||++|++++++.|+++|++++.++..+..   
T Consensus       377 dp~~~~dP~~F~PeRfl~~~---~---~~~-~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~---  446 (463)
T PLN02774        377 DPFLYPDPMTFNPWRWLDKS---L---ESH-NYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK---  446 (463)
T ss_pred             CcccCCChhccCchhcCCCC---c---CCC-ccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc---
Confidence            99999999999999999531   1   112 3699999999999999999999999999999999999987643221   


Q ss_pred             ccceeccCCCeeEeeec
Q 043297          480 FGILIKKKEPLVAIPTP  496 (505)
Q Consensus       480 ~~~~~~~~~~~~v~~~~  496 (505)
                       ..++.|++++.|+++|
T Consensus       447 -~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        447 -FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             -CCCCCCCCCceEEeee
Confidence             1234467889888874


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3e-67  Score=536.56  Aligned_cols=444  Identities=20%  Similarity=0.314  Sum_probs=332.4

Q ss_pred             CCCCCCCCc-------------chHHHHHhh---CCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccceee
Q 043297           22 LPPGPRGLP-------------TFTELAGVY---GPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVAS   85 (505)
Q Consensus        22 ~~Pgp~~~p-------------~~~~~~~ky---G~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~   85 (505)
                      .+|||+++|             .+.+|.++|   |++|++++|+.++|+++||+++++|+.++...|.+...+.. ....
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~-~~~~  109 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKNYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS-YMEV  109 (516)
T ss_pred             ccCCCCCCCeecchHHHHhccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH-HHHH
Confidence            479999988             245677788   89999999999999999999999999876445544322110 0001


Q ss_pred             cCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHH-HHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHH
Q 043297           86 FGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALR-KQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNM  164 (505)
Q Consensus        86 ~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~  164 (505)
                      ..|.+++ +.+|+.|+++||+++ +.|+.++++.+.+.+ .+.++.+++.+.+...  .++++|+.+++..+++|+|+.+
T Consensus       110 ~~g~~l~-~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        110 LLGDGIF-NVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASF--ANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             HhcCeee-ccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCeEcHHHHHHHHHHHHHHHH
Confidence            2355655 457999999999997 899999999998875 6667777777765332  4567999999999999999999


Q ss_pred             HhhhhhhhhhccCcchHHHHHHHHHHHHHhhhcccccccccc--ccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 043297          165 LWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPV--LSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVS  242 (505)
Q Consensus       165 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  242 (505)
                      +||.+++..+.+..  ...+...+..........   ...|+  +..+......+...+....+.+++.+.+++++++..
T Consensus       186 ~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (516)
T PLN03195        186 GFGVEIGTLSPSLP--ENPFAQAFDTANIIVTLR---FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMD  260 (516)
T ss_pred             HhCCCccccccCCC--ccHHHHHHHHHHHHHHHH---HhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999876543111  123333333332211110   01121  111101112234456677788888888888776531


Q ss_pred             hcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChh
Q 043297          243 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  322 (505)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~  322 (505)
                      ...     . .......|+++.|++..++  ++..++++++.+++.++++   ||+     |||+++++|++|+|++||+
T Consensus       261 ~~~-----~-~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~---AG~-----dTTa~tl~~~l~~L~~~P~  324 (516)
T PLN03195        261 EAR-----K-SGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVI---AGR-----DTTATTLSWFVYMIMMNPH  324 (516)
T ss_pred             ccc-----c-ccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHH---Hhh-----HhHHHHHHHHHHHHhcCHH
Confidence            100     0 0012356899999986543  2346999999999999999   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCC--------------------CCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccc-c
Q 043297          323 VMKKVQEELAQVVGM--------------------DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSI-G  380 (505)
Q Consensus       323 ~q~~lr~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l-~  380 (505)
                      +|+++|+||+++++.                    ++.++++++++||||+|||+||||++| +|.. .|.+.+|.++ +
T Consensus       325 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~  403 (516)
T PLN03195        325 VAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPD  403 (516)
T ss_pred             HHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCC
Confidence            999999999988642                    245788999999999999999999999 7774 5767776665 9


Q ss_pred             ceecCCCCEEEeechhhccCCCCC-CCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHH
Q 043297          381 GYTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLAS  459 (505)
Q Consensus       381 g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~  459 (505)
                      |+.|||||.|.++.+++||||++| +||++|+||||+++... .   ...+..|+|||.|+|.|+|++||++|+++++|.
T Consensus       404 G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~-~---~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~  479 (516)
T PLN03195        404 GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVF-Q---NASPFKFTAFQAGPRICLGKDSAYLQMKMALAL  479 (516)
T ss_pred             CcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCc-C---CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999 99999999999952110 0   123457999999999999999999999999999


Q ss_pred             HHHhcceecCCCCccccCccccceeccCCCeeEeeecCC
Q 043297          460 LLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       460 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  498 (505)
                      |+++|++++.++.++..  ....+..|+.++.|++++|.
T Consensus       480 ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        480 LCRFFKFQLVPGHPVKY--RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HHHhceeEecCCCccee--eeeeEEecCCCEEEEEEeCC
Confidence            99999999876643322  23455678889999999984


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.8e-66  Score=522.87  Aligned_cols=412  Identities=20%  Similarity=0.324  Sum_probs=326.7

Q ss_pred             cCCCCCCCCCCCc---------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccc
Q 043297           18 ANAKLPPGPRGLP---------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGL   82 (505)
Q Consensus        18 ~~~~~~Pgp~~~p---------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~   82 (505)
                      ...+.||||+++|               ++.+++++||+||++|+++.++|+++||+++++|+.++...|..  ......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~--~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKP--TFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccc--cCchHH
Confidence            3678899998888               67788999999999999999999999999999999987655532  111111


Q ss_pred             eeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHH
Q 043297           83 VASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  162 (505)
Q Consensus        83 ~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~  162 (505)
                      .... |...++..+|+.|+++||+++ +.|++++++.+.+.+.+.++++++.|.       ++.+|+.++++.+++++++
T Consensus       110 ~~~~-g~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~v~~  180 (463)
T PLN02196        110 ERML-GKQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-------GTQINTYQEMKTYTFNVAL  180 (463)
T ss_pred             HHHc-CcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-------CCeEEeHHHHHHHHHHHHH
Confidence            1112 433344457999999999998 899999999999999999999988763       4579999999999999999


Q ss_pred             HHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 043297          163 NMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVS  242 (505)
Q Consensus       163 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  242 (505)
                      .++||.+.....       ..+......+...      ...+|+.  + +....++..++.+.+.+++.+.++++++.. 
T Consensus       181 ~~~fG~~~~~~~-------~~~~~~~~~~~~~------~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-  243 (463)
T PLN02196        181 LSIFGKDEVLYR-------EDLKRCYYILEKG------YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQNG-  243 (463)
T ss_pred             HHHcCCCCchHH-------HHHHHHHHHHhcc------hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhcC-
Confidence            999998753211       1111111111100      1112321  1 111234566777888888888888775432 


Q ss_pred             hcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChh
Q 043297          243 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  322 (505)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~  322 (505)
                                   ....|+++.+++.      +..++++++.+++.++++   ||+     |||+++++|++++|++||+
T Consensus       244 -------------~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~---Ag~-----dTta~~l~~~l~~L~~~P~  296 (463)
T PLN02196        244 -------------SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIF---AAR-----DTTASVLTWILKYLAENPS  296 (463)
T ss_pred             -------------CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHH---hhh-----HHHHHHHHHHHHHHHhCHH
Confidence                         1346899999863      235899999999999999   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCC---CCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhc
Q 043297          323 VMKKVQEELAQVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIH  398 (505)
Q Consensus       323 ~q~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~  398 (505)
                      +|+++++|++++.+.   ++.++.+++++||||+|||+||||++| ++. ..|.+.+|++++||.|||||.|+++.+++|
T Consensus       297 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~  375 (463)
T PLN02196        297 VLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKVLPLFRNIH  375 (463)
T ss_pred             HHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cceeeccccccCCEEeCCCCEEEeeHHHhc
Confidence            999999999998864   356789999999999999999999999 766 569999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCc
Q 043297          399 RDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSE  478 (505)
Q Consensus       399 ~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~  478 (505)
                      +||++|+||++|+||||+..         ..+.+|+|||.|+|.|+|+++|++|++++++.|+++|++++.+++ .+.  
T Consensus       376 rd~~~~~dP~~F~PeRfl~~---------~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~--  443 (463)
T PLN02196        376 HSADIFSDPGKFDPSRFEVA---------PKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGI--  443 (463)
T ss_pred             CCchhcCCcCccChhhhcCC---------CCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cce--
Confidence            99999999999999999941         134589999999999999999999999999999999999987653 222  


Q ss_pred             cccceeccCCCeeEeeecC
Q 043297          479 KFGILIKKKEPLVAIPTPR  497 (505)
Q Consensus       479 ~~~~~~~~~~~~~v~~~~r  497 (505)
                      .+..+..|+.++.|+++++
T Consensus       444 ~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        444 QYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             EEcccccCCCCceEEEecC
Confidence            2344456888888888754


No 25 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.5e-66  Score=523.89  Aligned_cols=437  Identities=23%  Similarity=0.376  Sum_probs=335.5

Q ss_pred             chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccceeecCCCceecCCCChhHHHHHHHHHHH
Q 043297           31 TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGK  110 (505)
Q Consensus        31 ~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~  110 (505)
                      ++.+|+++||+||++++|+.++|+++||+++++|+.+.+..|.++.......  ...|.++++ .+|+.|+++||+++ +
T Consensus        41 ~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~--~~~~~~i~~-~~g~~wk~~Rk~l~-~  116 (489)
T PLN02936         41 PLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE--FLFGSGFAI-AEGELWTARRRAVV-P  116 (489)
T ss_pred             HHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH--HHhcCcccc-CCchHHHHHHHhhc-C
Confidence            8999999999999999999999999999999999988656676654322111  123556555 46999999999997 8


Q ss_pred             hcchhhHhHhhH-HHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHH
Q 043297          111 LMSNASLDACYA-LRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLA  189 (505)
Q Consensus       111 ~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  189 (505)
                      .|+...+..+.+ .+.++++.+++.+.+...  .++++|+.++++.+++|+++.++||.+++....+     .++...+.
T Consensus       117 ~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~-----~~~~~~~~  189 (489)
T PLN02936        117 SLHRRYLSVMVDRVFCKCAERLVEKLEPVAL--SGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLTTD-----SPVIQAVY  189 (489)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHHHcCCCccccccC-----cHHHHHHH
Confidence            999888887755 788899999999986543  5678999999999999999999999998765431     22333333


Q ss_pred             HHHHhhhccccccccccccc--cc-cccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHH
Q 043297          190 ELVVLMGTQNISDIIPVLSW--LD-IQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLL  266 (505)
Q Consensus       190 ~~~~~~~~~~~~~~~P~l~~--l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll  266 (505)
                      ..+..... .....+|++.+  +. ..+..++..++.+.+.+++.+.++++++..+.........+.......|+++.|+
T Consensus       190 ~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll  268 (489)
T PLN02936        190 TALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLL  268 (489)
T ss_pred             HHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHH
Confidence            33222111 11123343211  00 1112345667788888888888887765432101000000000123578999999


Q ss_pred             hhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccC
Q 043297          267 ELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHL  346 (505)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l  346 (505)
                      +..+      .++++++.+++.++++   ||+     ||||++++|++|+|++||++|+++|+||+++++. ..++++++
T Consensus       269 ~~~~------~~~~~~i~~~~~~~~~---aG~-----dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~  333 (489)
T PLN02936        269 ASRE------EVSSVQLRDDLLSMLV---AGH-----ETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDI  333 (489)
T ss_pred             hccc------cCCHHHHHHHHHHHHH---HhH-----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHH
Confidence            7542      3889999999999999   999     9999999999999999999999999999999884 45788999


Q ss_pred             CCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhccCCCCCCCCCCCCCcccccCCCCCCcc
Q 043297          347 PKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFD  425 (505)
Q Consensus       347 ~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  425 (505)
                      ++||||+|||+||||++| ++...+|.+..|+.++||.||+||.|+++.+++||||++|+||++|+||||+.++....  
T Consensus       334 ~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~--  411 (489)
T PLN02936        334 KELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPN--  411 (489)
T ss_pred             hhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCcc--
Confidence            999999999999999999 78877777777888899999999999999999999999999999999999995321111  


Q ss_pred             ccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCccccceeccCCCeeEeeecCC
Q 043297          426 YSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       426 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  498 (505)
                      ....+.+|+|||.|+|.|||++||++|++++++.|+++|++++++++++..  ..+.+..|+.++.|+++||.
T Consensus       412 ~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        412 ETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             ccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEEeee
Confidence            122345899999999999999999999999999999999999987754432  33455667788999999884


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.8e-66  Score=519.02  Aligned_cols=423  Identities=19%  Similarity=0.276  Sum_probs=326.4

Q ss_pred             cCCCCCCCCCCCc-------------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCC
Q 043297           18 ANAKLPPGPRGLP-------------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPP   78 (505)
Q Consensus        18 ~~~~~~Pgp~~~p-------------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~   78 (505)
                      .+.+.||||.++|                   ++.+++++||+||++|+|++++|+++||+++++++.+++..|..+...
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~   83 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK   83 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence            3677899999999                   346789999999999999999999999999999999887666644322


Q ss_pred             cccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHh-hHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHH
Q 043297           79 IAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDAC-YALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTF  157 (505)
Q Consensus        79 ~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~  157 (505)
                      .....   .|.+.++..+|+.|+++|+++. +.|+..++... .+.+.+.+.++++.+.      .++.+|+.+.+..++
T Consensus        84 ~~~~l---~g~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  153 (452)
T PLN03141         84 SLTEL---MGKSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR------DDPPVLVQDETKKIA  153 (452)
T ss_pred             hHHHH---hCcccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc------CCCCEEhHHHHHHHH
Confidence            11111   2433344557999999999997 78887777553 4555555555555542      456799999999999


Q ss_pred             HHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 043297          158 VCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQY  237 (505)
Q Consensus       158 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  237 (505)
                      ++++++++||.+.+...       .++...+..+.....      .+|+.  + +.....+..++.+.+.+++...|+++
T Consensus       154 ~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~--~-p~~~~~~~~~~~~~l~~~~~~~i~~~  217 (452)
T PLN03141        154 FEVLVKALISLEPGEEM-------EFLKKEFQEFIKGLM------SLPIK--L-PGTRLYRSLQAKKRMVKLVKKIIEEK  217 (452)
T ss_pred             HHHHHHHHcCCCchHHH-------HHHHHHHHHHhhhHH------hCccC--C-CchHhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999997654221       223333333322111      11211  1 11112344567788889999999888


Q ss_pred             HhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHH
Q 043297          238 RNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTEL  317 (505)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L  317 (505)
                      ++.... +  .+   .......|+++.+++..     +..+++++++.++.++++   ||+     |||+++++|++++|
T Consensus       218 ~~~~~~-~--~~---~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~---Ag~-----dTts~tl~~~~~~L  278 (452)
T PLN03141        218 RRAMKN-K--EE---DETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMI---PGE-----DSVPVLMTLAVKFL  278 (452)
T ss_pred             HHHHhc-c--Cc---cccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHH---hcc-----hhHHHHHHHHHHHH
Confidence            765411 0  00   00012469999999764     235899999999999999   999     99999999999999


Q ss_pred             hhChhHHHHHHHHHHHhhC----CCCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEe
Q 043297          318 MHNPRVMKKVQEELAQVVG----MDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIIL  392 (505)
Q Consensus       318 ~~~p~~q~~lr~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~  392 (505)
                      ++||++|+++++|++++++    .+..++.+++.+||||+|||+|+||++| ++ .++|.+.+|++++||.||+|+.|++
T Consensus       279 ~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~-~~~R~~~~d~~l~g~~IPkG~~V~~  357 (452)
T PLN03141        279 SDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIIN-GVMRKAMKDVEIKGYLIPKGWCVLA  357 (452)
T ss_pred             HhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcC-CcceeecCCeeECCEEECCCCEEEE
Confidence            9999999999999998763    2445788999999999999999999999 65 5789999999999999999999999


Q ss_pred             echhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC
Q 043297          393 NVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGT  472 (505)
Q Consensus       393 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~  472 (505)
                      +.+++|+||++|+||++|+||||++++        ..+.+|+|||.|+|.|+|++||++|+++++|.|+++|++++.++.
T Consensus       358 ~~~~~~~d~~~~~dP~~F~PeRfl~~~--------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~  429 (452)
T PLN03141        358 YFRSVHLDEENYDNPYQFNPWRWQEKD--------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT  429 (452)
T ss_pred             ehHhccCCchhcCCccccCcccccCCC--------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC
Confidence            999999999999999999999999531        124589999999999999999999999999999999999987653


Q ss_pred             ccccCccccceeccCCCeeEeeecCCC
Q 043297          473 KLDLSEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       473 ~~~~~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      .+     ...++.|+.++.|++++|++
T Consensus       430 ~~-----~~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        430 IV-----NFPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             ee-----ecccccCCCCceEEEEeCCC
Confidence            21     12467788899999999964


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=9.2e-65  Score=516.99  Aligned_cols=423  Identities=24%  Similarity=0.357  Sum_probs=331.3

Q ss_pred             CCCCCCCCCCCc-------------------chHHHHHhhCC--eEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCC
Q 043297           19 NAKLPPGPRGLP-------------------TFTELAGVYGP--IFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDP   77 (505)
Q Consensus        19 ~~~~~Pgp~~~p-------------------~~~~~~~kyG~--v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~   77 (505)
                      ..+.||||+++|                   ++.+++++||+  ||++++++.++|+++||+++++|+.+++ .|.+...
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCCc
Confidence            678999999999                   46788999997  7999999999999999999999998763 5554432


Q ss_pred             CcccceeecCCCceecCCCChhHHHHHHHHHHHhc-chhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHH
Q 043297           78 PIAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLM-SNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSIST  156 (505)
Q Consensus        78 ~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~  156 (505)
                      .....   ..|.+.++..+|+.|+++||.++ +.| +++.++.+.+.+.+.+..+++.+.      .++.+|+.+.+..+
T Consensus       119 ~~~~~---~~g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~------~~~~v~~~~~~~~~  188 (490)
T PLN02302        119 ESTVE---LIGRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWS------KMGEIEFLTELRKL  188 (490)
T ss_pred             hhHHH---HhccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhc------CCCCEehHHHHHHH
Confidence            22111   12434445557999999999998 777 578899999999999999999885      23469999999999


Q ss_pred             HHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 043297          157 FVCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQ  236 (505)
Q Consensus       157 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  236 (505)
                      +++++++++||.+.+...       ..+...+.........  ....+|..       ...+..+..+.+.+++.+.+++
T Consensus       189 ~~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~  252 (490)
T PLN02302        189 TFKIIMYIFLSSESELVM-------EALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDE  252 (490)
T ss_pred             HHHHHHHHHcCCCChHHH-------HHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998765332       1222222211111111  00111211       1233445667788888888888


Q ss_pred             HHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHH
Q 043297          237 YRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTE  316 (505)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~  316 (505)
                      +++..+.         .......|+++.|++..++  ++..++++++.+++..+++   ||+     |||+++++|++++
T Consensus       253 ~~~~~~~---------~~~~~~~d~l~~ll~~~~~--~~~~~~~~~i~~~~~~~~~---Ag~-----dtta~~l~~~l~~  313 (490)
T PLN02302        253 RRNSRKQ---------NISPRKKDMLDLLLDAEDE--NGRKLDDEEIIDLLLMYLN---AGH-----ESSGHLTMWATIF  313 (490)
T ss_pred             HHHhhhc---------cCCCCcCCHHHHHHhhhcc--CCCCCCHHHHHHHHHHHHH---hhH-----HHHHHHHHHHHHH
Confidence            8654311         0012457999999987654  2345899999999999998   999     9999999999999


Q ss_pred             HhhChhHHHHHHHHHHHhhCCC----CCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEE
Q 043297          317 LMHNPRVMKKVQEELAQVVGMD----SCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTII  391 (505)
Q Consensus       317 L~~~p~~q~~lr~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~  391 (505)
                      |++||++|+++++|++++++..    ..++++++++||||+|||+|+||++| ++. .+|.+.+|++++||.||||+.|.
T Consensus       314 L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~  392 (490)
T PLN02302        314 LQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVL  392 (490)
T ss_pred             HHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEE
Confidence            9999999999999999998642    12788999999999999999999999 766 57999999999999999999999


Q ss_pred             eechhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCC
Q 043297          392 LNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAG  471 (505)
Q Consensus       392 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~  471 (505)
                      ++.+++||||++|+||++|+||||++..        ..+..|+|||.|+|.|+|++||..|++++++.|+++|++++.++
T Consensus       393 ~~~~~~~rd~~~~~dP~~F~PeR~~~~~--------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  464 (490)
T PLN02302        393 AWFRQVHMDPEVYPNPKEFDPSRWDNYT--------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP  464 (490)
T ss_pred             eeHHHhcCCcccCCCccccChhhcCCCC--------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence            9999999999999999999999999521        13458999999999999999999999999999999999998754


Q ss_pred             CccccCccccceeccCCCeeEeeecCCC
Q 043297          472 TKLDLSEKFGILIKKKEPLVAIPTPRLP  499 (505)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~v~~~~r~~  499 (505)
                      . .++  .......|..++.+++++|.+
T Consensus       465 ~-~~~--~~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        465 G-CKV--MYLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             C-Ccc--eeCCCCCCCCCceEEEEeccC
Confidence            2 222  222336778899999999875


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=6e-64  Score=502.90  Aligned_cols=431  Identities=20%  Similarity=0.309  Sum_probs=326.6

Q ss_pred             HHHHHhhhccccCCCCCCCCCCCc-------------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHh
Q 043297            7 YFAWNVKKSRKANAKLPPGPRGLP-------------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRD   67 (505)
Q Consensus         7 ~~~~~~~~~~~~~~~~~Pgp~~~p-------------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~   67 (505)
                      ++++..++....+.+.||||.++|                   ++.+++++||+||+++++++++|+|+||+++++++.+
T Consensus        16 ~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~   95 (472)
T PLN02987         16 IFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQN   95 (472)
T ss_pred             HHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhC
Confidence            333333333455778899999998                   2356788999999999999999999999999999998


Q ss_pred             cCcccccCCCCcccceeecCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCcc
Q 043297           68 QDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPI  147 (505)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v  147 (505)
                      +...|.++........  ++++++++. +|+.|+++|+++. +.++.+.++.+.   .+++..+++...+.    .++++
T Consensus        96 ~~~~f~~~~~~~~~~~--lg~~~l~~~-~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~v  164 (472)
T PLN02987         96 EGKLFECSYPGSISNL--LGKHSLLLM-KGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDS----WSSRV  164 (472)
T ss_pred             CCceEEecCcHHHHHH--hCccccccc-CcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHh----hccce
Confidence            8767754432111121  233456655 6999999999976 555555554432   22233333332221    12368


Q ss_pred             chhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHH
Q 043297          148 DVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFE  227 (505)
Q Consensus       148 d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~  227 (505)
                      ++.+.+..++++++++++||.+.+...       ..+...+.......    ....+|++.     ...++..+..+++.
T Consensus       165 ~~~~~~~~~t~~vi~~~~fg~~~~~~~-------~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~  228 (472)
T PLN02987        165 LLMEEAKKITFELTVKQLMSFDPGEWT-------ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVA  228 (472)
T ss_pred             ehHHHHHHHHHHHHHHHHcCCCChHHH-------HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHH
Confidence            999999999999999999997764322       11222222221111    112244431     23466777888999


Q ss_pred             HHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchh
Q 043297          228 NFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTT  307 (505)
Q Consensus       228 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta  307 (505)
                      +++.+.++++++..+.         + .....|+++.|++..+      .++++++.+++.++++   ||+     |||+
T Consensus       229 ~~~~~~i~~r~~~~~~---------~-~~~~~d~l~~ll~~~~------~~~~~ei~~~~~~l~~---Ag~-----~tta  284 (472)
T PLN02987        229 EALTLVVMKRRKEEEE---------G-AEKKKDMLAALLASDD------GFSDEEIVDFLVALLV---AGY-----ETTS  284 (472)
T ss_pred             HHHHHHHHHHHhhhhc---------c-CcccccHHHHHHhcCC------CCCHHHHHHHHHHHHH---hcc-----chHH
Confidence            9999999998765310         0 1235799999997632      4899999999999999   999     9999


Q ss_pred             hhHHHHHHHHhhChhHHHHHHHHHHHhhCC---CCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCccccccee
Q 043297          308 TTVEWTMTELMHNPRVMKKVQEELAQVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYT  383 (505)
Q Consensus       308 ~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~  383 (505)
                      ++++|++++|++||++|+++++|++++.+.   +..++++++.+||||+||++||||++| ++ .++|.+.+|++++||.
T Consensus       285 ~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~-~~~R~~~~d~~~~G~~  363 (472)
T PLN02987        285 TIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIG-GIFRRAMTDIEVKGYT  363 (472)
T ss_pred             HHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcC-CccccCCCCeeECCEE
Confidence            999999999999999999999999998752   345788899999999999999999999 65 4779999999999999


Q ss_pred             cCCCCEEEeechhhccCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHh
Q 043297          384 VPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHS  463 (505)
Q Consensus       384 ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~  463 (505)
                      ||+||.|+++.+.+|+||++|+||++|+||||++++..     ...+..++|||.|+|.|||++||+.|++++++.|+++
T Consensus       364 ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~  438 (472)
T PLN02987        364 IPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-----TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTR  438 (472)
T ss_pred             ECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-----CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999953211     1223589999999999999999999999999999999


Q ss_pred             cceecCCCCccccCccccceeccCCCeeEeeecCC
Q 043297          464 FDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  498 (505)
                      |++++.++..+.    ...++.|..++.+++++|+
T Consensus       439 f~~~~~~~~~~~----~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        439 FSWVPAEQDKLV----FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             eEEEECCCCcee----ecccccCCCCceEEEEecc
Confidence            999998664322    2347788889999999995


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.5e-64  Score=507.69  Aligned_cols=425  Identities=20%  Similarity=0.277  Sum_probs=325.2

Q ss_pred             chHHHHHhhC-CeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccceeecCCCceecCCCChhHHHHHHHHHH
Q 043297           31 TFTELAGVYG-PIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFVG  109 (505)
Q Consensus        31 ~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~  109 (505)
                      ++..+.++|+ .+++++.++.  ++++||+.+++|+.++...|.+...+.. ......|+|++. .+|+.|+++||+++ 
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~-~~~~~~g~gi~~-~~g~~wk~~Rk~l~-  139 (502)
T PLN02426         65 WYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSA-ILGDLLGRGIFN-VDGDSWRFQRKMAS-  139 (502)
T ss_pred             HHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHH-HHHHhcCCceee-cCcHHHHHHHHHhH-
Confidence            4445677776 5788877663  8999999999999987556665432211 111123666655 56999999999997 


Q ss_pred             HhcchhhHhHhh--HHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHH
Q 043297          110 KLMSNASLDACY--ALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFK  187 (505)
Q Consensus       110 ~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~  187 (505)
                      +.|+..+++.+.  ..+.+..+.+++.+.+..+..++.++|+.++++.+++|+|+.++||.+++..+.+  ....++...
T Consensus       140 ~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~--~~~~~~~~~  217 (502)
T PLN02426        140 LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELS--LPISEFADA  217 (502)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCC--CCccHHHHH
Confidence            999999988764  5677778888888876543213567999999999999999999999998765431  112344444


Q ss_pred             HHHHHHhhhcccccccccccc----ccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHH
Q 043297          188 LAELVVLMGTQNISDIIPVLS----WLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQ  263 (505)
Q Consensus       188 ~~~~~~~~~~~~~~~~~P~l~----~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~  263 (505)
                      +..+....... ....+|++.    ++ ..+..++..+..+.+.+++.++|+++++..             .....|+++
T Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~-------------~~~~~dll~  282 (502)
T PLN02426        218 FDTASKLSAER-AMAASPLLWKIKRLL-NIGSERKLKEAIKLVDELAAEVIRQRRKLG-------------FSASKDLLS  282 (502)
T ss_pred             HHHHHHHHHHH-HhcchhHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHHHHHHHhcc-------------cCCcchHHH
Confidence            44433221111 111223221    22 122345667788888999999999887542             123579999


Q ss_pred             HHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHHHHhhCCC-CCcc
Q 043297          264 LLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMD-SCVE  342 (505)
Q Consensus       264 ~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~-~~~~  342 (505)
                      .+++..        .+++++.+++.++++   ||+     |||+++++|++|+|++||++|+++++||+++++.+ ..++
T Consensus       283 ~ll~~~--------~~~~~l~~~~~~~l~---AG~-----dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t  346 (502)
T PLN02426        283 RFMASI--------NDDKYLRDIVVSFLL---AGR-----DTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAAS  346 (502)
T ss_pred             HHHhcC--------CCHHHHHHHHHHHHH---hcc-----chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCC
Confidence            999753        257889999999999   999     99999999999999999999999999999998753 3679


Q ss_pred             cccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccc-cceecCCCCEEEeechhhccCCCCC-CCCCCCCCcccccCC
Q 043297          343 EFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSI-GGYTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDG  419 (505)
Q Consensus       343 ~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l-~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~  419 (505)
                      ++++++||||+|||+||||++| +|. ..|.+.+|.++ +|+.||+||.|.++.+++||||++| +||++|+||||++++
T Consensus       347 ~~~l~~LpYl~avi~EtLRl~p~v~~-~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~  425 (502)
T PLN02426        347 FEEMKEMHYLHAALYESMRLFPPVQF-DSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNG  425 (502)
T ss_pred             HHHHhcChHHHHHHHHHHhCCCCCCC-cceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCC
Confidence            9999999999999999999999 776 45999998887 9999999999999999999999999 999999999999521


Q ss_pred             CCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCccccceeccCCCeeEeeecCC
Q 043297          420 IASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       420 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  498 (505)
                         .. ....+..|+|||.|+|.|+|++||++|++++++.|+++|++++.++.........+++..|+.++.|++++|.
T Consensus       426 ---~~-~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        426 ---VF-VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             ---Cc-CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence               10 0123457999999999999999999999999999999999998654222223345677888899999999985


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.1e-61  Score=442.55  Aligned_cols=433  Identities=22%  Similarity=0.341  Sum_probs=343.9

Q ss_pred             CCCCCCCCCc---------------chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhcCcccccCCCCcccceee
Q 043297           21 KLPPGPRGLP---------------TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVAS   85 (505)
Q Consensus        21 ~~~Pgp~~~p---------------~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~   85 (505)
                      +.||..+||+               ++++..+|||+||++.++|+.+.++.+|+....++.++...++-...+.......
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            7999999987               9999999999999999999999999999999999998744443222221111122


Q ss_pred             cCCCceecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHH-HHhhccCCCCCccchhhhHHHHHHHHHHHH
Q 043297           86 FGGNDILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRD-LYNNNKTGIGKPIDVGELSISTFVCVIQNM  164 (505)
Q Consensus        86 ~~g~~~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~  164 (505)
                       -|.|+.....+.....+.+.+. ..+....++.+.+.|.+++...+.. +.+     ++.+-.+..+...+.+-+.-.+
T Consensus       111 -Fg~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~-----s~~~d~l~~~~~~ii~tAs~~l  183 (486)
T KOG0684|consen  111 -FGKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE-----SGETDGLYTFCRLIIFTASRLL  183 (486)
T ss_pred             -cCCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc-----ccchhHhhhhhHHHhhhhHHHh
Confidence             2677887777888888888886 7889999999999999999988887 322     4445556666666666666666


Q ss_pred             HhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 043297          165 LWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVV  244 (505)
Q Consensus       165 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (505)
                      +||+.....++       .....+.++.....  .+...||.  +++. ...++..++.+.+.+.+...+.++++..   
T Consensus       184 l~~e~r~~~d~-------~~a~l~~dLd~~F~--~~d~~FP~--~LP~-~~~r~~~ra~~~i~k~f~~~i~~rr~s~---  248 (486)
T KOG0684|consen  184 LGGEVRDQLDA-------DVAKLYHDLDQGFQ--PFDFLFPY--NLPI-PLLRRRDRARKKISKIFSKIILDRRASI---  248 (486)
T ss_pred             hhhhhhhhhcc-------hHHHHHHHHhcccc--chHhhccc--CCCc-chhhhHHHHHHHHHHHHHHHHHHHHhcc---
Confidence            66666554332       23333333333222  23345663  3322 2345666899999999999999998775   


Q ss_pred             ccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHH
Q 043297          245 EGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVM  324 (505)
Q Consensus       245 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q  324 (505)
                                .....|+++.+++ ...  ++...+++|+.+.++.+++   ||+     .||+.|.+|++++|++|||++
T Consensus       249 ----------s~~~~dmlq~l~~-~y~--dg~~~te~e~a~~li~~Lw---A~Q-----~ns~ptsfW~l~yLl~~Pe~~  307 (486)
T KOG0684|consen  249 ----------SKWDNDMLQSLME-KYK--DGRPTTEEEIAGLLIGLLW---AGQ-----HNSSPTSFWTLAYLLRHPEAQ  307 (486)
T ss_pred             ----------ccccHHHHHHHHH-Hhh--cCCcCcHHHHHHHHHHHHH---hcc-----ccccHHHHHHHHHHhhCHHHH
Confidence                      3356799999998 333  4667999999999999999   999     999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCC-cccccCCCChhHHHHHHHhhccCC-CCCCCccccCCcccccc----eecCCCCEEEeechhhc
Q 043297          325 KKVQEELAQVVGMDSC-VEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGG----YTVPKDTTIILNVWAIH  398 (505)
Q Consensus       325 ~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g----~~ip~Gt~v~~~~~~~~  398 (505)
                      +.+++|+.+++|+... ++++.|++||.|++||+|||||+| .+. +.|.+.+|.++.+    |.||+|..|.++++.+|
T Consensus       308 ~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~h  386 (486)
T KOG0684|consen  308 KAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLH  386 (486)
T ss_pred             HHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEecccccc
Confidence            9999999999998655 999999999999999999999999 555 6799999999965    99999999999999999


Q ss_pred             cCCCCCCCCCCCCCcccccCCCCCCccccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCc
Q 043297          399 RDPQIWDNPLEFGPEKFLNDGIASKFDYSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSE  478 (505)
Q Consensus       399 ~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~  478 (505)
                      +||++|+||+.|+|+||+++.++++.....-...|+|||+|.|.|||+.||.+|++.++..+|+.||+++.+| +++..+
T Consensus       387 r~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d  465 (486)
T KOG0684|consen  387 RDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVD  465 (486)
T ss_pred             CCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCC
Confidence            9999999999999999998655432111222335799999999999999999999999999999999999987 333333


Q ss_pred             cccceeccCCCeeEeeecCC
Q 043297          479 KFGILIKKKEPLVAIPTPRL  498 (505)
Q Consensus       479 ~~~~~~~~~~~~~v~~~~r~  498 (505)
                      ...++..|..++.++.+.|.
T Consensus       466 ~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  466 YSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             HHHhhcCCCCCceEEEeecC
Confidence            34567889999999999986


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.9e-56  Score=443.08  Aligned_cols=403  Identities=16%  Similarity=0.195  Sum_probs=283.0

Q ss_pred             cCCCCCCCCCCCc-------------------chHHHHHhhCC-eEEEecCCeeE-------EEecCHHHHHHHHHh---
Q 043297           18 ANAKLPPGPRGLP-------------------TFTELAGVYGP-IFKLWLGKKLC-------VVVSSPSLVKQVVRD---   67 (505)
Q Consensus        18 ~~~~~~Pgp~~~p-------------------~~~~~~~kyG~-v~~~~~~~~~~-------vvv~dp~~i~~i~~~---   67 (505)
                      .+.+.|||+.|||                   |+.+..+|||+ ||+++++|.|+       |+++||++++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            3778899999999                   67777899999 99999999776       999999999999985   


Q ss_pred             -cCcccccCCCCcccceeecCCCc---eecCCCChhHHHHHHHHHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCC
Q 043297           68 -QDITFANRDPPIAGLVASFGGND---ILFSNYGPEWRKLRKLFVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGI  143 (505)
Q Consensus        68 -~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  143 (505)
                       ++..+....+... ..  + |.+   .++..+|+.|+++||++. +.|+ ..++.+.+.|.+.++.+++.|.....  .
T Consensus        94 ~~~~~~~~~~~~~~-~l--~-G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~--~  165 (480)
T PLN02648         94 DKRDVFTGTYMPST-AF--T-GGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELA--K  165 (480)
T ss_pred             cccccceeeeccCc-cc--c-CCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh--h
Confidence             4433444333222 12  2 433   555667999999999997 8998 47788999999999999999965422  4


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHHHHHHHHHhhhccccccccccccccccccHHHHHHHHH
Q 043297          144 GKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKFKLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKIS  223 (505)
Q Consensus       144 ~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~  223 (505)
                      ++++|+.+.++.+++|++++++||.+.+...     ....+.......+...       .+|.....             
T Consensus       166 ~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~-----l~~~~~~~~~~~~~~~-------~~p~~~~~-------------  220 (480)
T PLN02648        166 KGKAEFNDPLDQMAFNFLCKALTGKDPSETA-----LGSDGPALIQKWLALQ-------LAPLASTG-------------  220 (480)
T ss_pred             CCCccccchHHHHHHHHHHHHHcCCCcchhh-----hccchhHHHHHHHHHH-------hhHHHHcC-------------
Confidence            5579999999999999999999998665410     1111212222111100       01110000             


Q ss_pred             HHHHHHHHHHHHHHHhhh--hhcccCCCCCCCCCCCcchHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccc
Q 043297          224 LCFENFIDSAVEQYRNKV--SVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFW  301 (505)
Q Consensus       224 ~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~  301 (505)
                        +...+++++.++....  ......   . .....-.+.+..+++..++    .+++++++.++++.++  .++|+   
T Consensus       221 --l~~~~~~~i~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~--~~~t~---  285 (480)
T PLN02648        221 --LPHVLEELLLHTFPLPFFLVKSDY---D-KLYDFFRASATEALDLAEK----FGISREEALHNLLFVL--GFNAF---  285 (480)
T ss_pred             --chHHHHHHhhcccCCchhhhhccH---H-HHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHH--HHHhh---
Confidence              0001111111000000  000000   0 0000001122344443332    2489999999886422  23777   


Q ss_pred             cCCchhhhHHHHHHHHhhChh-HHHHHHHHHHHhhCC-CCCcccccCCCChhHHHHHHHhhccCC-CCCCCccccCCccc
Q 043297          302 WNRHTTTTVEWTMTELMHNPR-VMKKVQEELAQVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSS  378 (505)
Q Consensus       302 ~~dTta~~l~~~l~~L~~~p~-~q~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~  378 (505)
                        +|++++++|++|+|++||+ +|+++++||+++++. ++.++++++++||||++||+||||++| ++. +.|.+.+|++
T Consensus       286 --~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~-~~r~a~~d~~  362 (480)
T PLN02648        286 --GGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPF-QYGRAREDFV  362 (480)
T ss_pred             --HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccc-ccceecCCEE
Confidence              8888999999999999995 999999999999863 456899999999999999999999999 666 5688999999


Q ss_pred             cc----ceecCCCCEEEeechhhccCCCCCCCCCCCCCcccccCCCCCCcccc--CCCCceeecCCCCCCCCcHHHHHHH
Q 043297          379 IG----GYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYS--GNNFQYLPFGAGRRMCAGIALAERM  452 (505)
Q Consensus       379 l~----g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~~  452 (505)
                      ++    ||.||||+.|+++.+.+||||++|+||++|+|+||++++........  .......+||.|+|.|||++||++|
T Consensus       363 l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e  442 (480)
T PLN02648        363 IESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLV  442 (480)
T ss_pred             EecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHH
Confidence            95    79999999999999999999999999999999999863221100000  0011223346778999999999999


Q ss_pred             HHHHHHHHHHhcc-eecCCC
Q 043297          453 LMFVLASLLHSFD-WKLPAG  471 (505)
Q Consensus       453 ~~~~l~~ll~~~~-~~~~~~  471 (505)
                      ++++++.|+++|+ +++.++
T Consensus       443 ~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        443 ARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             HHHHHHHHHHHhCEEeecCC
Confidence            9999999999998 998766


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.4e-52  Score=411.19  Aligned_cols=379  Identities=28%  Similarity=0.407  Sum_probs=303.4

Q ss_pred             chHHHHHhhCCeEEEecCCee--EEEecCHHHHHHHHHhcCcccccCCCCcccc--eeecCCCceecCCCChhHHHHHHH
Q 043297           31 TFTELAGVYGPIFKLWLGKKL--CVVVSSPSLVKQVVRDQDITFANRDPPIAGL--VASFGGNDILFSNYGPEWRKLRKL  106 (505)
Q Consensus        31 ~~~~~~~kyG~v~~~~~~~~~--~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~w~~~Rr~  106 (505)
                      ....+.+.||.+++++..+.-  +++++++++++++++++. .+++........  .....|.+.+++.+|+.|.++||+
T Consensus        27 ~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl  105 (411)
T COG2124          27 FLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKL  105 (411)
T ss_pred             hHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHH
Confidence            345577888999988876644  799999999999999974 222222111111  122235555666789999999999


Q ss_pred             HHHHhcchhhHhHhhHHHHHHHHHHHHHHHhhccCCCCCccchhhhHHHHHHHHHHHHHhhhhhhhhhccCcchHHHHHH
Q 043297          107 FVGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAELKF  186 (505)
Q Consensus       107 ~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~  186 (505)
                      ++ +.|+++.++.+.+.+.+.++++++.+ .     .++.+++.+....+++++|+ .+||.+.+....        +..
T Consensus       106 ~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~-----~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~--------~~~  169 (411)
T COG2124         106 LA-PAFTPRALRGYRPLIREIADRLLDDL-W-----QGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQ--------LLR  169 (411)
T ss_pred             hc-cccCHHHHHHHHHHHHHHHHHHHHhc-c-----cCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHH--------HHH
Confidence            98 99999999999999999999999999 3     33788999999999999999 999998876542        222


Q ss_pred             HHHHHHHhhhccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCcchHHHHHH
Q 043297          187 KLAELVVLMGTQNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLL  266 (505)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll  266 (505)
                      ..........        |...   ......+..++...+.+++..+|++++..                ..+|+++.|+
T Consensus       170 ~~~~~~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~----------------~~~dlls~l~  222 (411)
T COG2124         170 WSDALLLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRAA----------------PRDDLLSLLL  222 (411)
T ss_pred             HHHHHHhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC----------------CcccHHHHHH
Confidence            2222221100        1111   11224667888899999999999999832                5689999999


Q ss_pred             hhhcccCCCCCCcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccC
Q 043297          267 ELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHL  346 (505)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l  346 (505)
                      .+.+++  +..+|++|+.+++.++++   ||+     |||+++|+|++|.|++||++++++++|.+.             
T Consensus       223 ~a~~~~--~~~lsd~Ei~~~~~~ll~---AGh-----eTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-------------  279 (411)
T COG2124         223 SAEDDG--GGRLSDDEIRDELITLLV---AGH-----ETTANALAWALYALLRHPDQLAKLRAEPDR-------------  279 (411)
T ss_pred             HHhhCC--CCcCCHHHHHHHHHHHHH---hhh-----HHHHHHHHHHHHHHHHCchHHHHHHhCcch-------------
Confidence            998762  236999999999999999   999     999999999999999999999999998753             


Q ss_pred             CCChhHHHHHHHhhccCC-CCCCCccccCCcccccceecCCCCEEEeechhhccCCCCCCCCCCCCCcccccCCCCCCcc
Q 043297          347 PKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFD  425 (505)
Q Consensus       347 ~~lp~l~a~i~EtlRl~p-~~~~~~R~~~~~~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  425 (505)
                         ||+.++|+||||++| ++. +.|.+.+|++++|+.||+|+.|+++++++||||++|+||++|+|+||.         
T Consensus       280 ---~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~---------  346 (411)
T COG2124         280 ---PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN---------  346 (411)
T ss_pred             ---HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC---------
Confidence               789999999999999 776 889999999999999999999999999999999999999999999996         


Q ss_pred             ccCCCCceeecCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccccCccccceeccCCCeeEeeecC
Q 043297          426 YSGNNFQYLPFGAGRRMCAGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPR  497 (505)
Q Consensus       426 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  497 (505)
                           .+++|||.|+|.|+|..||++|++++++.++++|++....+ ...  .....+..+.....+.++.|
T Consensus       347 -----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~--~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 -----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PPP--LVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             -----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCC--ccccccccCCCcceeeeecC
Confidence                 27999999999999999999999999999999999988766 211  22334445555566666554


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=50.94  E-value=11  Score=25.48  Aligned_cols=7  Identities=43%  Similarity=0.985  Sum_probs=5.7

Q ss_pred             CCccccc
Q 043297          411 GPEKFLN  417 (505)
Q Consensus       411 ~P~R~l~  417 (505)
                      ||||||+
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7889985


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=45.24  E-value=70  Score=20.66  Aligned_cols=43  Identities=21%  Similarity=0.283  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHH
Q 043297          281 IQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEEL  331 (505)
Q Consensus       281 ~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei  331 (505)
                      -++...+..++-   .|.     |..+-.++-.|....-||+....+-.|+
T Consensus         5 ~d~l~eiS~lLn---tgL-----d~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLN---TGL-----DRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHc---CCC-----CHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            355566667777   888     8888888888888888999888887775


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=42.62  E-value=23  Score=23.76  Aligned_cols=20  Identities=30%  Similarity=0.451  Sum_probs=16.7

Q ss_pred             HHHHHHhhChhHHHHHHHHH
Q 043297          312 WTMTELMHNPRVMKKVQEEL  331 (505)
Q Consensus       312 ~~l~~L~~~p~~q~~lr~Ei  331 (505)
                      -++.||.+||++.+++.+.=
T Consensus         4 ~iV~YLv~nPevl~kl~~g~   23 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGE   23 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCC
Confidence            46789999999999998743


No 36 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=40.38  E-value=23  Score=28.44  Aligned_cols=23  Identities=22%  Similarity=0.388  Sum_probs=17.2

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHh
Q 043297          441 RMCAGIALAERMLMFVLASLLHS  463 (505)
Q Consensus       441 r~C~G~~~A~~~~~~~l~~ll~~  463 (505)
                      -+|.|++||+.++-.++..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            48999999999999999999974


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=32.41  E-value=29  Score=24.77  Aligned_cols=39  Identities=5%  Similarity=0.175  Sum_probs=31.5

Q ss_pred             HHHHhhccCC-CCCCCccccCCccc--ccceecCCCCEEEee
Q 043297          355 VVKETFRLHS-VPYLVPRRASQSSS--IGGYTVPKDTTIILN  393 (505)
Q Consensus       355 ~i~EtlRl~p-~~~~~~R~~~~~~~--l~g~~ip~Gt~v~~~  393 (505)
                      -++|-|.+.+ ....+-|.+.+++.  ++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            4789999999 66667788876654  599999999998876


No 38 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=31.40  E-value=1.2e+02  Score=24.34  Aligned_cols=36  Identities=17%  Similarity=0.327  Sum_probs=30.1

Q ss_pred             chHHHHHhhCCeEEEecCCeeEEEecCHHHHHHHHHhc
Q 043297           31 TFTELAGVYGPIFKLWLGKKLCVVVSSPSLVKQVVRDQ   68 (505)
Q Consensus        31 ~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~i~~i~~~~   68 (505)
                      .+.+|.++||.+--.  .+...+.+.|++.++++...+
T Consensus        79 ~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   79 SIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            999999999998553  345788899999999998775


No 39 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=30.74  E-value=31  Score=30.22  Aligned_cols=43  Identities=28%  Similarity=0.239  Sum_probs=31.0

Q ss_pred             ChhHHHHHHHhhccCCCCCCCccccCCcccccceecCCCCEEEe
Q 043297          349 LKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIIL  392 (505)
Q Consensus       349 lp~l~a~i~EtlRl~p~~~~~~R~~~~~~~l~g~~ip~Gt~v~~  392 (505)
                      -..+.|||.|+.-+... ..+.=...+|+.++|..||+||.|.-
T Consensus        52 ~n~I~A~V~~~qtv~~G-s~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDG-SRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCC-CEEEEEEcCceEECCEEeCCCCEEEE
Confidence            34567899999877662 22322457899999999999997754


No 40 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=29.03  E-value=1.2e+02  Score=19.76  Aligned_cols=36  Identities=14%  Similarity=0.125  Sum_probs=26.8

Q ss_pred             hHHHHHhhCCeEEEecC----CeeEEEecCHHHHHHHHHh
Q 043297           32 FTELAGVYGPIFKLWLG----KKLCVVVSSPSLVKQVVRD   67 (505)
Q Consensus        32 ~~~~~~kyG~v~~~~~~----~~~~vvv~dp~~i~~i~~~   67 (505)
                      +.++..+||+|-++.+.    +.-.|-..+.+.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            45778899999988764    3456777899998888764


No 41 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=28.81  E-value=2.4e+02  Score=20.77  Aligned_cols=48  Identities=10%  Similarity=0.144  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHHHHhh
Q 043297          280 TIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVV  335 (505)
Q Consensus       280 ~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~  335 (505)
                      ...........++   -=+     ++++....-.+.+.++||+..+++.+.+..-+
T Consensus        31 ~~~~~~~~~~~I~---kKy-----~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIF---KKY-----GIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHH---HHc-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            3444444455555   888     89999999999999999999999999887654


No 42 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=20.33  E-value=3.5e+02  Score=25.66  Aligned_cols=63  Identities=17%  Similarity=0.171  Sum_probs=44.8

Q ss_pred             CcHHHHHHHHHHHHHHHhhccccccCCchhhhHHHHHHHHhhChhHHHHHHHHHHHhhCCCCCcccccCC--CChhHHHH
Q 043297          278 ISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLP--KLKYLDAV  355 (505)
Q Consensus       278 ~~~~~l~~~~~~~~~~~~AG~~~~~~dTta~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~--~lp~l~a~  355 (505)
                      -+.+.|...+..|-+   .|.                     +|...+.|.++-.-.+-.++.++..-|+  ++.|.--.
T Consensus       343 GtWDHI~~QiGMFSy---TGL---------------------tp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkA  398 (410)
T KOG1412|consen  343 GTWDHITQQIGMFSY---TGL---------------------TPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKA  398 (410)
T ss_pred             CcHHHHHhhccceee---cCC---------------------CHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHH
Confidence            457888888877777   776                     4455556666555455556667766655  78999999


Q ss_pred             HHHhhccCC
Q 043297          356 VKETFRLHS  364 (505)
Q Consensus       356 i~EtlRl~p  364 (505)
                      |.|+.|-.+
T Consensus       399 Ide~Vr~~~  407 (410)
T KOG1412|consen  399 IDETVRAIK  407 (410)
T ss_pred             HHHHHHhhc
Confidence            999999765


Done!