BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043301
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P5E8|DGKQ_MOUSE Diacylglycerol kinase theta OS=Mus musculus GN=Dgkq PE=1 SV=1
Length = 934
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 41/111 (36%), Gaps = 20/111 (18%)
Query: 35 CDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLS--KTNHH-------- 84
C +C SL+ PA+ C CE +H C +P CH T HH
Sbjct: 129 CVVCRKSLEVPAFRCEVCELHVHPDC--VPFACSDCRQCHQDGQQDYDTYHHHWREGNLP 186
Query: 85 ---RCDACLDECSG----MAYRCHECCYNLHYHC-TALKPSINFKELKCVL 127
RC+ C C RC C H C TAL P F L+ ++
Sbjct: 187 SGARCEVCRKTCGSSDVLAGVRCEWCGVQAHSVCSTALAPECTFGRLRSMV 237
>sp|Q7Y0F2|NRX12_ORYSJ Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica
GN=Os03g0405900 PE=2 SV=1
Length = 581
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 56 IHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLHYHCT 112
I+ P K+ H H H L L++ + CD C + +YRC EC ++LH C
Sbjct: 494 INDMAKGWPEKLKHDLHDHELVLTRCTTYGCDGCDEMGDSWSYRCKECDFDLHPKCA 550
>sp|P52824|DGKQ_HUMAN Diacylglycerol kinase theta OS=Homo sapiens GN=DGKQ PE=1 SV=2
Length = 942
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 37/111 (33%), Gaps = 20/111 (18%)
Query: 35 CDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKT------------- 81
C +C L+ PA C CE +H C +P CH
Sbjct: 135 CAVCRKVLEAPALHCEVCELHLHPDC--VPFACSDCRQCHQDGHQDHDTHHHHWREGNLP 192
Query: 82 NHHRCDACLDECSG----MAYRCHECCYNLHYHCT-ALKPSINFKELKCVL 127
+ RC+ C C RC C H C+ AL P F L+ ++
Sbjct: 193 SGARCEVCRKTCGSSDVLAGVRCEWCGVQAHSLCSAALAPECGFGRLRSLV 243
>sp|Q7Y0E8|NRX11_ORYSJ Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica
GN=Os03g0405500 PE=2 SV=1
Length = 569
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 53 EFSIHKSCAELPLKIDHPFHC-HPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLHYHC 111
E I + P K+ H H H L L++ + CD C + S +YRC EC ++LH C
Sbjct: 480 ERKIDEMAKGWPGKLKHELHDEHELVLTRCTTYGCDGCDEMGSSWSYRCRECDFDLHPKC 539
Query: 112 TALK 115
K
Sbjct: 540 ALGK 543
>sp|O80763|NRX1_ARATH Probable nucleoredoxin 1 OS=Arabidopsis thaliana GN=At1g60420 PE=1
SV=1
Length = 578
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 60 CAELPLKIDHPFHC-HPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLHYHCT 112
+ P K+ H H H L L++ + CD C +E + +Y C EC ++LH C
Sbjct: 491 AKDWPKKVKHVLHEEHELELTRVQVYTCDKCEEEGTIWSYHCDECDFDLHAKCA 544
>sp|Q54SP2|FORB_DICDI Formin-B OS=Dictyostelium discoideum GN=forB PE=1 SV=1
Length = 1126
Score = 38.9 bits (89), Expect = 0.035, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 144 LRTIQERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLS------ETGDQG 197
++ ++ ++P L FH F++ E R + +N+ SE+A +KK L+ E +
Sbjct: 870 IQFLENKHPSLLEFHQEFTAIDEAKRVSI----QNLRSEVASLKKGLTLLTNEVEKSEGA 925
Query: 198 SKVTISESYPYSDDTLAQFILRLQNSLRSKNMSVEFWDLD 237
SK +S S D + + +L S N +V+F+ D
Sbjct: 926 SKTILSGFVGKSTDAVTLIEKQFNTALESFNSTVQFYGED 965
>sp|Q8VZQ0|NRX3_ARATH Probable nucleoredoxin 3 OS=Arabidopsis thaliana GN=At4g31240 PE=2
SV=1
Length = 392
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 56 IHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLHYHCT 112
+ K LP K+ H H L L + CD C + A+ C+ C Y+LH C
Sbjct: 328 LKKEGDSLPRKVKDNKHEHELKLDMAKAYVCDFCKKQGRFWAFSCNACDYDLHPTCV 384
>sp|O18048|NH213_CAEEL Nuclear hormone receptor family member nhr-213 OS=Caenorhabditis
elegans GN=nhr-213 PE=3 SV=1
Length = 414
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 16/78 (20%)
Query: 32 VIICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLD 91
+++C +C S G +G C ++CA F + L + ++C +
Sbjct: 21 IVLCKVCALSAHGSHFGVLAC-----RACA--------AFFRRTVVLERQKQYKCKKGKN 67
Query: 92 EC---SGMAYRCHECCYN 106
EC + Y+C C YN
Sbjct: 68 ECPVDTAERYQCRLCRYN 85
>sp|P55200|MLL1_MOUSE Histone-lysine N-methyltransferase MLL OS=Mus musculus GN=Mll PE=1
SV=3
Length = 3966
Score = 33.5 bits (75), Expect = 1.3, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 49 CGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLH 108
CG C+ +H C +LS T + + +AY C C
Sbjct: 1587 CGKCDRWVHSKCE---------------SLSGTEDEMYEILSNLPESVAYTCVNCT---E 1628
Query: 109 YHCTALKPSINFKELKCVLHEVMQSLLEKQPQDVELRTIQERNPEDL---TFHDVFSSFT 165
H + ++ KEL+ L +V+ +LL + LR Q P DL T + S +
Sbjct: 1629 RHPAEWRLALE-KELQASLKQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEESIPSRSS 1687
Query: 166 EK--DRNQLDDITENIESE---IAGIKKTLSETGDQGSKVTISESYPYSDDTL 213
+ D L ++++ E + + G+KK + DQGS V++ E +SDD +
Sbjct: 1688 PEGPDPPVLTEVSKQDEQQPLDLEGVKKRM----DQGSYVSVLE---FSDDIV 1733
>sp|B7KSC1|MURG_METC4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Methylobacterium chloromethanicum (strain
CM4 / NCIMB 13688) GN=murG PE=3 SV=1
Length = 369
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 126 VLHEVMQSLLEKQPQDVELR--TIQERNPEDLT 156
V+ EV+ + +EK PQD+ R +Q+ PEDLT
Sbjct: 202 VMSEVVPAAIEKLPQDLRARLHLVQQARPEDLT 234
>sp|A9VWV3|MURG_METEP UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Methylobacterium extorquens (strain PA1)
GN=murG PE=3 SV=1
Length = 369
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 126 VLHEVMQSLLEKQPQDVELR--TIQERNPEDLT 156
V+ EV+ + +EK PQD+ R +Q+ PEDLT
Sbjct: 202 VMSEVVPAAIEKLPQDLRARLHLVQQARPEDLT 234
>sp|B1ZGP4|MURG_METPB UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Methylobacterium populi (strain ATCC
BAA-705 / NCIMB 13946 / BJ001) GN=murG PE=3 SV=1
Length = 370
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 126 VLHEVMQSLLEKQPQDVELR--TIQERNPEDLT 156
V+ E++ + +EK PQD+ R +Q+ PEDLT
Sbjct: 202 VMSEIVPAAIEKLPQDLRARLHLVQQARPEDLT 234
>sp|P30337|CHIN_RAT N-chimaerin OS=Rattus norvegicus GN=Chn1 PE=2 SV=2
Length = 334
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 20/127 (15%)
Query: 84 HRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELK-------CVLHEVMQS 133
H C+ C + G+ +C +C N+H C+ + P+ +LK C L ++++
Sbjct: 92 HWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKA 151
Query: 134 LLEKQPQDVEL--RTIQER--NPEDLTFHDVFSSFTEKDRNQLD------DITENIESEI 183
+ K+P V++ R I+ R N E L FS E + D DI+ N+ +I
Sbjct: 152 HITKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDI 211
Query: 184 AGIKKTL 190
I L
Sbjct: 212 NIITGAL 218
>sp|P04627|ARAF_MOUSE Serine/threonine-protein kinase A-Raf OS=Mus musculus GN=Araf PE=2
SV=2
Length = 604
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 86 CDACLDECSGMAYRCHECCYNLHYHCTALKPSINFKELKCVLHEVMQSLLEKQPQDVELR 145
CD CL +RC C Y H HC++ P++ CV + QD+
Sbjct: 112 CDFCLKFLF-HGFRCQTCGYKFHQHCSSKVPTV------CVDMSTNRRQFYHSIQDLSGG 164
Query: 146 TIQERNPEDLTFHDVF-----SSFTEK 167
+ Q+ P +L+ +++ S FT++
Sbjct: 165 SRQQEAPSNLSVNELLTPQGPSPFTQQ 191
>sp|Q17QN0|CHIN_BOVIN N-chimaerin OS=Bos taurus GN=CHN1 PE=2 SV=1
Length = 334
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 84 HRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELK-------CVLHEVMQS 133
H C+ C + G+ +C +C N+H C+ + P+ +LK C L ++++
Sbjct: 92 HWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKA 151
Query: 134 LLEKQPQDVEL--RTIQER--NPEDLTFHDVFSSFTEKDRNQLD------DITENIESEI 183
K+P V++ R I+ R N E L FS E + D DI+ N+ +I
Sbjct: 152 RTTKRPMVVDMCIREIEARGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDI 211
Query: 184 AGIKKTL 190
I L
Sbjct: 212 NIITGAL 218
>sp|Q91V57|CHIN_MOUSE N-chimaerin OS=Mus musculus GN=Chn1 PE=1 SV=2
Length = 459
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 20/127 (15%)
Query: 84 HRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELK-------CVLHEVMQS 133
H C+ C + G+ +C +C N+H C+ + P+ +LK C L ++++
Sbjct: 217 HWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKA 276
Query: 134 LLEKQPQDVEL--RTIQER--NPEDLTFHDVFSSFTEKDRNQLD------DITENIESEI 183
+ K+P V++ R I+ R N E L FS E + D DI+ N+ +I
Sbjct: 277 HITKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDI 336
Query: 184 AGIKKTL 190
I L
Sbjct: 337 NIITGAL 343
>sp|Q7SY24|KPCB_DANRE Protein kinase C beta type OS=Danio rerio GN=prkcbb PE=2 SV=1
Length = 670
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 14/87 (16%)
Query: 46 AYGCGTCEFSIHKSCAEL-----PLKIDHPFHCHPLTLSKTNHHR------CDACLDECS 94
+ C C F +HK C E P P P + K H CD C
Sbjct: 63 GFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKVHTYSSPTFCDHCGSLLY 122
Query: 95 GM---AYRCHECCYNLHYHCTALKPSI 118
G+ RC C N+H C A PS+
Sbjct: 123 GLIHQGMRCDHCMMNIHKRCVANVPSL 149
>sp|P09560|RAF1_XENLA RAF proto-oncogene serine/threonine-protein kinase OS=Xenopus
laevis GN=raf1 PE=2 SV=1
Length = 638
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 97 AYRCHECCYNLHYHCTALKPSINFKELKCV-LHEVMQSLLEKQPQDVE 143
A+RC C Y H HC+ P++ CV + Q LL P ++E
Sbjct: 161 AFRCQTCGYKFHEHCSTKVPTM------CVDWSNIRQLLLFPNPNNIE 202
>sp|P14056|ARAF_RAT Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus GN=Araf
PE=2 SV=1
Length = 604
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 86 CDACLDECSGMAYRCHECCYNLHYHCTALKPSINFKELKCVLHEVMQSLLEKQPQDVELR 145
CD CL +RC C Y H HC++ P++ CV + QD+
Sbjct: 112 CDFCLKFLF-HGFRCQTCGYKFHQHCSSKVPTV------CVDMSTNRRQFYHSIQDLSGG 164
Query: 146 TIQERNPEDLTFHDVF-----SSFTEK 167
+ Q+ P +L+ +++ S FT++
Sbjct: 165 SRQQEVPSNLSVNELLTPQGPSPFTQQ 191
>sp|Q6MEX9|SECA_PARUW Protein translocase subunit SecA OS=Protochlamydia amoebophila
(strain UWE25) GN=secA PE=3 SV=1
Length = 1020
Score = 31.6 bits (70), Expect = 5.6, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 141 DVELRTIQERNPEDLTFHDVFSSFTEKDRNQLDDITENI-ESEIAGIKKTLSETGDQGSK 199
DV LR + +R+P H+ F+ F E RN ++ ++ EI ++TL + G +
Sbjct: 891 DVTLRAVGQRDPLTEFKHEAFALFDELSRNLRTEVARSMFRFEIIAPQQTLEQLLQSGLR 950
Query: 200 VTISESYPYSDDTLAQFILRLQNSLRSKNMSVE 232
+ + S + LQN S+ M+ +
Sbjct: 951 LETNRS----------LFVDLQNEQPSQEMAAD 973
>sp|Q9H799|CE042_HUMAN Uncharacterized protein C5orf42 OS=Homo sapiens GN=C5orf42 PE=1 SV=4
Length = 3197
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 43 QGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDE----CSGMAY 98
QG + GT F+I K + P+T K ++ C + +G+A
Sbjct: 3043 QGSPWPHGTATFTIQKKAGGAKAAVRKATQS-PVTFQKGSNAPCHSLQHTKKHGSAGLAP 3101
Query: 99 RCHECCYNLHYHCTALKPSINFKELKCVLHEVMQSLLE 136
+ + C T + P E+ +LHE SLL+
Sbjct: 3102 QTKQVCVEYEREETVVSPWTIPSEIHKILHESHNSLLQ 3139
>sp|Q8C966|PF21B_MOUSE PHD finger protein 21B OS=Mus musculus GN=Phf21b PE=2 SV=1
Length = 487
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 20/73 (27%)
Query: 6 ERDKLKHTSHMHYLIF-----NEN-----EVGHDDVVIICDICE--TSLQGPAYGCGTCE 53
ER +L +S++H +F NE+ E+ HD+ C C+ SLQ CGTC
Sbjct: 275 ERKRLA-SSYLHNPLFLTARANEDPCWKGEITHDE---FCAACKRGASLQP----CGTCS 326
Query: 54 FSIHKSCAELPLK 66
+ H SC + PLK
Sbjct: 327 GAYHLSCLDPPLK 339
>sp|Q9N0Y2|MX2_CANFA Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris
GN=MX2 PE=2 SV=1
Length = 711
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 24/168 (14%)
Query: 56 IHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLHYHCTALK 115
+ K+ L KI F L L+ + +E S Y Y L
Sbjct: 443 VKKNETRLYNKIREEFEHWALVLTANTQKVKNIVSEEVS---------VYEKQYRGKELL 493
Query: 116 PSINFKELKCVLHEVMQSLLEKQPQDVELRTIQERNPEDLTFHDVFSSFTEKDRNQ---L 172
+N+K + ++H+ ++ L+E P LR T V+ +FT+ +
Sbjct: 494 GFVNYKTFETIVHQYIEQLVE--PALTMLRK---------TIEIVWQAFTDTAKKHFSVF 542
Query: 173 DDITENIESEIAGIKKTLSETGDQGSKVTIS-ESYPYSDDTLAQFILR 219
++++ I+++I IK +ET + ++ E Y D + +LR
Sbjct: 543 SNLSQTIQNKIEDIKTRQAETAENLIRLQFRMEQLVYCQDQIYSVVLR 590
>sp|Q0JIL1|NRX2_ORYSJ Probable nucleoredoxin 2 OS=Oryza sativa subsp. japonica
GN=Os01g0794400 PE=2 SV=1
Length = 394
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 64 PLKIDHPFHCHPLTL----SKTNHHRCDACLDECSGMAYRCHECCYNLHYHC 111
P + H H H L++ S + C C ++ G AY+C C Y +H C
Sbjct: 334 PPSLRHTGHRHELSIVSDKSGGGPYICCECDEQGLGWAYQCIACGYEIHLRC 385
>sp|A8EXD1|DGTL1_RICCK Deoxyguanosinetriphosphate triphosphohydrolase-like protein
OS=Rickettsia canadensis (strain McKiel) GN=A1E_00305
PE=3 SV=1
Length = 376
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 110 HCTALKPSINFKELKCVLHEVMQSLLEKQPQDVELRTIQERNPEDLTFHDVFSSFTEKDR 169
+ ALK C+++EV++ L+ + D+ +T + N E +T D +
Sbjct: 225 YVFALKSKFKNISSSCLIYEVVRKLMHELITDLLWQTKENLNKEKITDIDEIRNLNY--- 281
Query: 170 NQLDDITENIESEIAGIKKTLSETGDQGSKVT 201
QL D T N I KK L E + +K+T
Sbjct: 282 -QLVDFTANTNERIKETKKFLHERVYKSNKIT 312
>sp|P10829|KPCG_RABIT Protein kinase C gamma type OS=Oryctolagus cuniculus GN=PRKCG PE=1
SV=1
Length = 697
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 83/227 (36%), Gaps = 45/227 (19%)
Query: 33 IICDICETSLQGPAYGCGTCEFSIHKSCAEL----------PLKIDHPFHCHPLTL-SKT 81
I I + LQ C C F +H+ C E + D P + H L S +
Sbjct: 55 FIWGIGKQGLQ-----CQVCSFVVHRRCHEFVTFECPGAGKGPQTDDPRNKHKFRLHSYS 109
Query: 82 NHHRCDACLDECSGMAY---RCHECCYNLHYHCTALKPSINFKELKCVLHEVMQSLLEKQ 138
+ CD C G+ + +C C N+H C PS L V H + L+
Sbjct: 110 SPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRTVPS-----LCGVDHTERRGRLQ-- 162
Query: 139 PQDVELRTIQERNPEDLTFHDVFS---SFTEKDRNQLDDITENIESEIAGIKKTLSETGD 195
++ R P H + D N L D ++ ++ + L++
Sbjct: 163 --------LEIRAPTSDEIHVTVGEARNLIPMDPNGLSD--PYVKLKLIPDPRNLTKQKT 212
Query: 196 QGSKVTISESYPYSDDTLAQFILRLQNSLRSKNMSVEFWDLDDVLVN 242
+ K T++ P ++T F+ L+ + +SVE WD D N
Sbjct: 213 RTVKATLN---PVWNET---FVFNLKPGDVERRLSVEVWDWDRTSRN 253
>sp|P15882|CHIN_HUMAN N-chimaerin OS=Homo sapiens GN=CHN1 PE=1 SV=3
Length = 459
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 84 HRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELK-------CVLHEVMQS 133
H C+ C + G+ +C +C N+H C+ + P+ +LK C L ++++
Sbjct: 217 HWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKA 276
Query: 134 LLEKQPQDVEL--RTIQER--NPEDLTFHDVFSSFTEKDRNQLD------DITENIESEI 183
K+P V++ R I+ R N E L FS E + D DI+ N+ +I
Sbjct: 277 HTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDI 336
Query: 184 AGIKKTL 190
I L
Sbjct: 337 NIITGAL 343
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,481,414
Number of Sequences: 539616
Number of extensions: 3628106
Number of successful extensions: 11416
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 11316
Number of HSP's gapped (non-prelim): 143
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)