Query 043301
Match_columns 244
No_of_seqs 182 out of 821
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 05:38:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043301.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043301hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfq_A PKC-B, PKC-beta, protei 99.9 5.5E-28 1.9E-32 238.5 6.6 200 17-242 38-254 (674)
2 1v5n_A PDI-like hypothetical p 99.5 1.6E-14 5.6E-19 108.6 3.2 59 2-66 22-81 (89)
3 1v5n_A PDI-like hypothetical p 99.5 1.6E-14 5.3E-19 108.7 2.5 64 53-116 16-80 (89)
4 1a25_A CALB, protein kinase C 99.1 9.8E-12 3.3E-16 99.6 2.2 90 140-242 20-113 (149)
5 3rdl_A Protein kinase C alpha 99.1 1E-11 3.5E-16 97.4 1.7 90 140-242 5-98 (137)
6 2z0u_A WW domain-containing pr 99.1 4.1E-12 1.4E-16 103.7 -1.4 90 140-242 30-127 (155)
7 3fbk_A RGS3, RGP3, regulator o 99.0 4E-11 1.4E-15 96.7 1.7 88 140-241 14-107 (153)
8 1rh8_A Piccolo protein; beta-s 99.0 2.6E-11 8.9E-16 95.9 -1.2 90 140-242 7-111 (142)
9 1wfm_A Synaptotagmin XIII; C2 99.0 8.6E-11 2.9E-15 93.2 1.6 87 140-242 13-105 (138)
10 2b3r_A Phosphatidylinositol-4- 99.0 6.5E-11 2.2E-15 93.6 0.6 88 141-242 10-103 (134)
11 1v27_A Regulating synaptic mem 99.0 4.6E-10 1.6E-14 88.3 4.7 89 140-241 8-104 (141)
12 2cm5_A Rabphilin-3A; protein t 98.9 1.4E-10 4.8E-15 94.5 1.5 90 140-242 24-120 (166)
13 3fdw_A Synaptotagmin-like prot 98.9 1.6E-10 5.5E-15 92.3 1.5 90 140-242 10-107 (148)
14 1w15_A Synaptotagmin IV; metal 98.9 1.3E-10 4.6E-15 93.2 0.8 90 140-242 17-113 (153)
15 2d8k_A Synaptotagmin VII; exoc 98.9 2.4E-10 8.2E-15 90.5 1.8 90 140-242 13-108 (141)
16 1ugk_A Synaptotagmin IV, KIAA1 98.9 2.6E-10 9E-15 89.9 1.8 90 140-242 9-105 (138)
17 1rsy_A Synaptotagmin I; calciu 98.9 1.4E-10 4.7E-15 93.3 -0.4 90 140-242 29-123 (152)
18 3n5a_A Synaptotagmin-7; calciu 98.9 2.5E-10 8.7E-15 89.3 1.1 90 140-242 3-99 (138)
19 2fk9_A Protein kinase C, ETA t 98.9 7.1E-11 2.4E-15 97.1 -2.4 77 150-242 28-114 (157)
20 2chd_A Rabphilin-3A, exophilin 98.9 1.3E-10 4.5E-15 92.0 -0.8 90 140-242 16-113 (142)
21 3f04_A Synaptotagmin-1; C2A, c 98.9 1.6E-10 5.4E-15 91.6 -0.5 90 140-242 21-115 (143)
22 2q3x_A Regulating synaptic mem 98.9 3.3E-10 1.1E-14 93.2 1.3 88 140-242 19-112 (171)
23 2dmg_A KIAA1228 protein; beta- 98.9 2.2E-10 7.4E-15 90.7 0.2 87 140-240 11-104 (142)
24 1tjx_A Similar to synaptotagmi 98.9 4E-10 1.4E-14 91.0 1.7 90 140-242 12-108 (159)
25 2enp_A B/K protein; C2 type 1, 98.9 3.4E-10 1.1E-14 90.2 1.2 90 140-242 13-114 (147)
26 2bwq_A Regulating synaptic mem 98.9 4.6E-10 1.6E-14 87.1 1.2 93 140-241 5-101 (129)
27 3pyc_A E3 ubiquitin-protein li 98.8 4.2E-10 1.4E-14 88.1 -0.1 75 152-242 6-81 (132)
28 1gmi_A Protein kinase C, epsil 98.7 4.4E-10 1.5E-14 88.7 -3.4 75 152-242 7-92 (136)
29 3b7y_A E3 ubiquitin-protein li 98.7 2E-09 6.7E-14 86.2 0.3 75 153-242 22-101 (153)
30 2ep6_A MCTP2 protein; beta san 98.7 2E-09 6.8E-14 84.3 0.3 74 153-242 15-88 (133)
31 2dmh_A Myoferlin; beta-sandwic 98.7 2.4E-09 8.2E-14 84.3 0.7 77 151-242 7-85 (140)
32 2r83_A Synaptotagmin-1; C2A-C2 98.7 3.7E-09 1.3E-13 92.5 1.4 90 140-242 6-100 (284)
33 1wfj_A Putative elicitor-respo 98.7 2.5E-09 8.5E-14 83.8 -0.2 75 152-242 11-86 (136)
34 1dqv_A Synaptotagmin III; beta 98.6 8.4E-09 2.9E-13 91.5 1.4 90 140-242 7-101 (296)
35 3nsj_A Perforin-1; pore formin 98.6 7.2E-09 2.5E-13 100.3 0.8 75 153-242 396-470 (540)
36 1dqv_A Synaptotagmin III; beta 98.6 1E-08 3.5E-13 90.9 1.1 80 150-242 151-235 (296)
37 2r83_A Synaptotagmin-1; C2A-C2 98.6 1.1E-08 3.8E-13 89.5 1.1 90 140-242 137-233 (284)
38 1rlw_A Phospholipase A2, CALB 98.6 2.9E-09 9.9E-14 82.2 -2.4 75 152-240 4-83 (126)
39 2eli_A Protein kinase C alpha 98.6 9.5E-08 3.2E-12 70.7 5.8 61 67-129 11-75 (85)
40 3m7f_B E3 ubiquitin-protein li 98.5 7.6E-09 2.6E-13 85.0 -0.4 76 152-242 9-89 (176)
41 3kwu_A MUNC13-1; calcium bindi 98.5 1.1E-08 3.8E-13 81.3 0.3 73 151-239 17-89 (148)
42 2nq3_A Itchy homolog E3 ubiqui 98.5 1.5E-08 5.3E-13 83.8 -0.4 74 151-242 36-110 (173)
43 2cjt_A UNC-13 homolog A, MUNC1 98.5 1.3E-08 4.6E-13 80.4 -1.0 68 153-242 7-75 (131)
44 2cjs_A UNC-13 homolog A, MUNC1 98.3 7.1E-08 2.4E-12 79.6 -0.6 68 153-242 16-84 (167)
45 3jzy_A Intersectin 2; C2 domai 98.2 1.7E-07 5.8E-12 88.4 -0.5 76 152-242 388-463 (510)
46 2enz_A NPKC-theta, protein kin 98.1 3.3E-06 1.1E-10 59.1 4.4 49 73-123 12-64 (65)
47 3bxj_A RAS GTPase-activating p 98.0 8.6E-07 2.9E-11 84.3 -0.8 69 150-238 10-82 (483)
48 1ptq_A Protein kinase C delta 97.9 6.1E-06 2.1E-10 54.5 3.2 44 74-117 1-48 (50)
49 1rfh_A RAS association (ralgds 97.9 7.4E-06 2.5E-10 56.4 3.7 47 71-117 8-56 (59)
50 1djx_A PLC-D1, phosphoinositid 97.9 1.2E-06 4.2E-11 85.9 -0.4 80 152-242 498-581 (624)
51 1cjy_A CPLA2, protein (cytosol 97.9 7.6E-07 2.6E-11 89.1 -2.2 75 152-240 19-98 (749)
52 1kbe_A Kinase suppressor of RA 97.9 1.2E-05 4.2E-10 53.5 4.2 44 73-117 4-47 (49)
53 2fnf_X Putative RAS effector N 97.9 1.4E-05 4.8E-10 57.3 4.4 46 72-117 22-69 (72)
54 2row_A RHO-associated protein 97.8 3.3E-06 1.1E-10 62.5 0.8 41 17-62 25-70 (84)
55 2row_A RHO-associated protein 97.8 5.7E-06 1.9E-10 61.2 2.0 50 73-124 24-82 (84)
56 2enz_A NPKC-theta, protein kin 97.8 1.8E-05 6.1E-10 55.3 4.4 44 16-64 12-58 (65)
57 1faq_A RAF-1; transferase, ser 97.8 1.5E-05 5.1E-10 53.0 3.8 45 73-118 3-48 (52)
58 2eli_A Protein kinase C alpha 97.8 2.5E-05 8.6E-10 57.5 5.1 49 12-65 13-64 (85)
59 1ptq_A Protein kinase C delta 97.8 1.2E-05 4E-10 53.1 2.9 36 29-64 8-46 (50)
60 3uej_A NPKC-delta, protein kin 97.8 8E-06 2.7E-10 57.1 2.2 46 73-118 9-58 (65)
61 1y8f_A UNC-13 homolog A, MUNC1 97.8 1.7E-05 5.7E-10 55.7 3.4 45 73-117 13-61 (66)
62 2db6_A SH3 and cysteine rich d 97.8 2.2E-05 7.7E-10 56.3 4.1 46 71-116 15-64 (74)
63 2enn_A NPKC-theta, protein kin 97.7 1.6E-05 5.4E-10 57.5 3.0 48 12-64 19-69 (77)
64 3uej_A NPKC-delta, protein kin 97.7 1.5E-05 5.1E-10 55.7 2.8 44 16-64 9-55 (65)
65 2yuu_A NPKC-delta, protein kin 97.7 3.2E-05 1.1E-09 56.6 4.5 48 12-64 13-63 (83)
66 2db6_A SH3 and cysteine rich d 97.7 1.7E-05 5.8E-10 57.0 2.5 49 12-65 13-64 (74)
67 2enn_A NPKC-theta, protein kin 97.7 3.1E-05 1.1E-09 56.0 3.6 46 72-117 22-71 (77)
68 1faq_A RAF-1; transferase, ser 97.6 3.6E-05 1.2E-09 51.1 3.6 42 17-64 4-45 (52)
69 2yuu_A NPKC-delta, protein kin 97.6 5.5E-05 1.9E-09 55.4 4.9 47 72-118 16-66 (83)
70 2fnf_X Putative RAS effector N 97.6 4.2E-05 1.4E-09 54.8 4.0 46 15-65 22-68 (72)
71 1rfh_A RAS association (ralgds 97.6 2.9E-05 9.8E-10 53.4 3.0 46 15-65 9-55 (59)
72 1y8f_A UNC-13 homolog A, MUNC1 97.6 2.4E-05 8.2E-10 54.9 2.5 43 17-64 14-59 (66)
73 1kbe_A Kinase suppressor of RA 97.3 0.00011 3.7E-09 48.9 2.3 42 17-65 5-46 (49)
74 2e5r_A Dystrobrevin alpha; ZZ 97.2 0.0002 6.7E-09 50.0 2.7 47 33-79 12-60 (63)
75 2fc7_A ZZZ3 protein; structure 97.0 0.00046 1.6E-08 50.6 3.7 48 32-81 21-75 (82)
76 4b6d_A RAC GTPase-activating p 97.0 0.00077 2.6E-08 46.6 4.2 46 73-118 8-56 (61)
77 3l9b_A Otoferlin; C2-domain, b 96.8 0.00018 6.1E-09 58.2 -0.1 71 153-242 23-95 (144)
78 2dip_A Zinc finger SWIM domain 96.8 0.00043 1.5E-08 52.5 1.9 43 32-79 31-75 (98)
79 2e5r_A Dystrobrevin alpha; ZZ 96.8 0.00057 1.9E-08 47.6 2.1 33 83-115 11-45 (63)
80 1tot_A CREB-binding protein; z 96.7 0.00022 7.6E-09 47.9 -0.1 41 32-79 6-47 (52)
81 2zkm_X 1-phosphatidylinositol- 96.4 0.00068 2.3E-08 68.3 0.7 73 153-237 680-755 (799)
82 2vrw_B P95VAV, VAV1, proto-onc 96.4 0.0022 7.4E-08 59.0 4.0 52 73-127 346-401 (406)
83 2dip_A Zinc finger SWIM domain 96.3 0.0013 4.6E-08 49.7 1.7 33 83-115 31-65 (98)
84 4b6d_A RAC GTPase-activating p 96.2 0.0026 9E-08 43.9 2.5 43 16-63 8-52 (61)
85 3qr0_A Phospholipase C-beta (P 96.1 0.0011 3.6E-08 67.1 0.2 73 153-237 652-727 (816)
86 2fc7_A ZZZ3 protein; structure 96.1 0.0048 1.6E-07 45.1 3.7 34 82-115 20-58 (82)
87 3ky9_A Proto-oncogene VAV; cal 96.0 0.0033 1.1E-07 60.8 3.4 43 17-64 519-564 (587)
88 3ky9_A Proto-oncogene VAV; cal 95.9 0.0042 1.4E-07 60.0 3.8 45 72-116 517-565 (587)
89 3cxl_A N-chimerin; SH2, RHO-GA 95.8 0.0043 1.5E-07 58.4 2.9 51 10-65 201-256 (463)
90 3cxl_A N-chimerin; SH2, RHO-GA 95.7 0.0053 1.8E-07 57.8 3.5 50 73-124 209-262 (463)
91 2vrw_B P95VAV, VAV1, proto-onc 95.7 0.006 2E-07 56.0 3.6 43 17-64 347-392 (406)
92 1tot_A CREB-binding protein; z 95.4 0.002 6.9E-08 43.1 -0.5 32 83-115 6-38 (52)
93 3pfq_A PKC-B, PKC-beta, protei 95.4 0.0028 9.5E-08 62.2 0.0 46 73-118 37-86 (674)
94 3ohm_B 1-phosphatidylinositol- 95.3 0.0052 1.8E-07 62.6 1.8 72 153-237 727-801 (885)
95 2ysm_A Myeloid/lymphoid or mix 90.5 0.6 2E-05 35.1 6.2 79 30-115 5-87 (111)
96 2k16_A Transcription initiatio 85.1 1.1 3.8E-05 31.2 4.3 37 29-65 15-52 (75)
97 2kwj_A Zinc finger protein DPF 82.6 0.57 1.9E-05 35.6 2.0 77 34-114 3-90 (114)
98 3v43_A Histone acetyltransfera 81.5 0.57 2E-05 35.5 1.7 77 33-113 6-93 (112)
99 1fp0_A KAP-1 corepressor; PHD 81.3 2.4 8.3E-05 31.0 5.0 34 29-64 22-55 (88)
100 1r79_A Diacylglycerol kinase, 78.7 0.98 3.4E-05 32.8 2.1 33 31-63 37-73 (84)
101 2lv9_A Histone-lysine N-methyl 78.2 2.4 8.1E-05 31.4 4.1 33 31-64 27-60 (98)
102 1r79_A Diacylglycerol kinase, 77.6 1.1 3.7E-05 32.6 2.0 45 73-117 27-76 (84)
103 2yql_A PHD finger protein 21A; 77.6 2.5 8.7E-05 27.8 3.7 33 30-64 7-39 (56)
104 1we9_A PHD finger family prote 76.5 1.9 6.6E-05 29.0 2.9 36 30-65 4-41 (64)
105 2jun_A Midline-1; B-BOX, TRIM, 76.4 1.7 5.7E-05 31.6 2.8 88 32-129 3-95 (101)
106 2ku3_A Bromodomain-containing 75.2 1.4 4.7E-05 30.9 1.9 43 73-115 6-51 (71)
107 1wil_A KIAA1045 protein; ring 74.7 1.2 4.2E-05 32.5 1.6 61 32-92 15-76 (89)
108 2l5u_A Chromodomain-helicase-D 73.4 2.9 9.7E-05 28.1 3.2 50 30-92 9-58 (61)
109 2lri_C Autoimmune regulator; Z 72.8 3.2 0.00011 28.5 3.4 31 32-64 12-42 (66)
110 1weo_A Cellulose synthase, cat 72.4 1 3.5E-05 33.3 0.7 34 31-64 15-53 (93)
111 1xwh_A Autoimmune regulator; P 72.4 3.8 0.00013 27.9 3.7 50 30-92 6-55 (66)
112 1f62_A Transcription factor WS 71.4 3.5 0.00012 26.4 3.1 31 34-64 2-33 (51)
113 2puy_A PHD finger protein 21A; 71.1 4.1 0.00014 27.1 3.5 31 32-64 5-35 (60)
114 1mm2_A MI2-beta; PHD, zinc fin 69.4 5.9 0.0002 26.5 4.0 49 31-92 8-56 (61)
115 1we9_A PHD finger family prote 68.9 4.2 0.00014 27.3 3.2 35 82-116 5-41 (64)
116 2k16_A Transcription initiatio 68.1 3.9 0.00013 28.3 3.0 34 82-115 17-51 (75)
117 2yt5_A Metal-response element- 66.7 4 0.00014 27.5 2.8 35 30-64 4-41 (66)
118 2jrp_A Putative cytoplasmic pr 65.7 4.4 0.00015 29.2 2.9 21 33-53 3-25 (81)
119 3o70_A PHD finger protein 13; 64.8 5.5 0.00019 27.4 3.2 36 29-65 16-52 (68)
120 4gne_A Histone-lysine N-methyl 64.5 17 0.00058 27.3 6.1 72 30-115 13-87 (107)
121 1wev_A Riken cDNA 1110020M19; 62.0 4.7 0.00016 29.1 2.5 35 31-65 15-52 (88)
122 2jne_A Hypothetical protein YF 61.6 3.1 0.00011 31.2 1.4 52 33-93 33-91 (101)
123 2yt5_A Metal-response element- 60.1 7.4 0.00025 26.1 3.1 34 82-115 5-41 (66)
124 2ku3_A Bromodomain-containing 59.9 3.9 0.00013 28.5 1.7 49 30-91 14-65 (71)
125 3o36_A Transcription intermedi 59.1 9.4 0.00032 30.9 4.2 47 33-92 5-51 (184)
126 4bbq_A Lysine-specific demethy 56.1 7.4 0.00025 29.0 2.8 77 33-115 8-93 (117)
127 2ri7_A Nucleosome-remodeling f 55.5 3.8 0.00013 32.8 1.2 34 30-64 6-41 (174)
128 1z60_A TFIIH basal transcripti 55.3 3.8 0.00013 27.8 0.9 31 33-63 16-47 (59)
129 1wee_A PHD finger family prote 55.2 8.9 0.0003 26.3 2.9 35 30-65 14-50 (72)
130 2e6s_A E3 ubiquitin-protein li 54.2 14 0.00049 25.9 3.9 31 34-64 28-59 (77)
131 1wev_A Riken cDNA 1110020M19; 53.4 9.6 0.00033 27.4 3.0 34 82-115 15-51 (88)
132 1joc_A EEA1, early endosomal a 52.5 8.4 0.00029 29.6 2.6 56 31-95 68-125 (125)
133 1wep_A PHF8; structural genomi 52.4 6.6 0.00022 27.6 1.9 35 30-65 10-46 (79)
134 3o70_A PHD finger protein 13; 52.3 11 0.00038 25.8 3.0 33 82-115 18-51 (68)
135 3v43_A Histone acetyltransfera 51.7 18 0.0006 27.0 4.3 31 34-64 63-95 (112)
136 2yql_A PHD finger protein 21A; 50.4 13 0.00045 24.2 3.0 32 82-115 8-39 (56)
137 2e6r_A Jumonji/ARID domain-con 50.1 11 0.00038 27.4 2.8 34 31-64 15-49 (92)
138 2ysm_A Myeloid/lymphoid or mix 49.7 16 0.00053 27.1 3.7 31 34-64 56-87 (111)
139 2ro1_A Transcription intermedi 49.2 11 0.00039 30.8 3.1 47 33-92 3-49 (189)
140 2puy_A PHD finger protein 21A; 49.0 13 0.00043 24.6 2.8 32 82-115 4-35 (60)
141 1wew_A DNA-binding family prot 48.5 9.8 0.00033 26.6 2.3 36 30-66 14-52 (78)
142 1wem_A Death associated transc 48.1 8.7 0.0003 26.6 1.9 33 31-64 15-48 (76)
143 1xwh_A Autoimmune regulator; P 46.7 15 0.0005 24.8 2.9 31 82-114 7-37 (66)
144 2ct0_A Non-SMC element 1 homol 46.5 9.1 0.00031 26.8 1.8 32 30-62 13-44 (74)
145 1x4u_A Zinc finger, FYVE domai 46.4 15 0.0005 26.0 3.0 34 30-63 12-47 (84)
146 2g6q_A Inhibitor of growth pro 45.9 10 0.00036 25.5 2.0 35 30-65 9-46 (62)
147 2xb1_A Pygopus homolog 2, B-ce 45.8 14 0.00047 27.5 2.8 33 83-115 3-38 (105)
148 2lq6_A Bromodomain-containing 45.6 9 0.00031 27.7 1.7 32 32-63 17-50 (87)
149 2lq6_A Bromodomain-containing 45.4 8.8 0.0003 27.7 1.6 43 73-115 6-51 (87)
150 2lv9_A Histone-lysine N-methyl 45.4 15 0.00052 26.8 3.0 31 84-115 29-60 (98)
151 2l5u_A Chromodomain-helicase-D 44.9 9.6 0.00033 25.4 1.7 32 82-115 10-41 (61)
152 1weu_A Inhibitor of growth fam 44.4 28 0.00095 25.4 4.2 35 30-65 34-71 (91)
153 2g6q_A Inhibitor of growth pro 44.4 15 0.0005 24.7 2.6 33 82-115 10-45 (62)
154 1wew_A DNA-binding family prot 43.4 11 0.00038 26.3 1.9 33 82-115 15-50 (78)
155 1fp0_A KAP-1 corepressor; PHD 43.4 25 0.00087 25.5 3.9 30 82-113 24-53 (88)
156 1wen_A Inhibitor of growth fam 43.1 21 0.00071 24.7 3.2 34 30-64 14-50 (71)
157 3u5n_A E3 ubiquitin-protein li 42.8 16 0.00055 30.1 3.1 59 31-102 6-65 (207)
158 2l43_A N-teminal domain from h 42.4 9.7 0.00033 27.5 1.5 34 82-115 24-60 (88)
159 2jmi_A Protein YNG1, ING1 homo 42.2 15 0.00053 26.7 2.5 35 30-65 24-61 (90)
160 3ask_A E3 ubiquitin-protein li 42.1 20 0.0007 30.5 3.6 32 33-64 175-207 (226)
161 2vnf_A ING 4, P29ING4, inhibit 41.8 17 0.00059 24.1 2.6 33 82-115 9-44 (60)
162 2vnf_A ING 4, P29ING4, inhibit 41.7 13 0.00045 24.7 2.0 35 30-65 8-45 (60)
163 1wg2_A Zinc finger (AN1-like) 41.4 16 0.00054 25.1 2.3 26 31-57 14-39 (64)
164 1wep_A PHF8; structural genomi 41.2 13 0.00045 26.0 1.9 33 82-115 11-45 (79)
165 1x61_A Thyroid receptor intera 41.2 22 0.00074 23.6 3.1 13 32-44 5-17 (72)
166 3c6w_A P28ING5, inhibitor of g 41.1 13 0.00046 24.6 1.9 35 30-65 7-44 (59)
167 3qt1_I DNA-directed RNA polyme 40.9 9.1 0.00031 29.9 1.2 35 72-106 8-55 (133)
168 1wem_A Death associated transc 40.6 13 0.00046 25.6 1.9 33 82-115 15-48 (76)
169 3asl_A E3 ubiquitin-protein li 40.4 13 0.00046 25.5 1.9 31 34-64 20-51 (70)
170 1wfh_A Zinc finger (AN1-like) 40.4 21 0.0007 24.6 2.8 27 30-57 13-39 (64)
171 3ny3_A E3 ubiquitin-protein li 39.4 14 0.00046 26.1 1.8 50 37-92 6-62 (75)
172 3c6w_A P28ING5, inhibitor of g 38.8 21 0.00071 23.7 2.6 33 82-115 8-43 (59)
173 2jmi_A Protein YNG1, ING1 homo 38.8 19 0.00064 26.3 2.5 33 82-115 25-60 (90)
174 1wfp_A Zinc finger (AN1-like) 38.6 19 0.00064 25.5 2.4 27 30-57 23-49 (74)
175 3nw0_A Non-structural maintena 38.5 12 0.00042 31.8 1.7 31 31-62 179-209 (238)
176 2yw8_A RUN and FYVE domain-con 38.5 21 0.00073 25.1 2.7 55 30-93 17-73 (82)
177 1wen_A Inhibitor of growth fam 37.0 22 0.00074 24.6 2.5 33 82-115 15-50 (71)
178 2l43_A N-teminal domain from h 36.6 10 0.00034 27.4 0.7 50 30-92 23-75 (88)
179 4gzn_C ZFP-57, zinc finger pro 36.4 10 0.00035 24.9 0.7 7 98-104 33-39 (60)
180 3t7l_A Zinc finger FYVE domain 36.2 23 0.00079 25.4 2.7 33 31-63 19-53 (90)
181 3lqh_A Histone-lysine N-methyl 36.0 22 0.00077 29.1 2.9 33 83-115 2-39 (183)
182 2rsd_A E3 SUMO-protein ligase 36.0 28 0.00094 23.5 2.9 34 30-64 8-44 (68)
183 3nis_A E3 ubiquitin-protein li 35.9 29 0.001 24.8 3.1 51 37-92 10-68 (82)
184 3lqh_A Histone-lysine N-methyl 35.9 16 0.00055 30.0 2.0 31 33-63 3-38 (183)
185 1z2q_A LM5-1; membrane protein 35.0 29 0.001 24.4 3.0 34 30-63 19-54 (84)
186 2xb1_A Pygopus homolog 2, B-ce 34.3 24 0.00082 26.2 2.5 32 33-64 4-38 (105)
187 2ri7_A Nucleosome-remodeling f 33.9 14 0.00047 29.4 1.2 33 82-115 7-41 (174)
188 2vpb_A Hpygo1, pygopus homolog 33.7 17 0.00057 24.7 1.5 34 31-64 7-43 (65)
189 1x4l_A Skeletal muscle LIM-pro 33.5 26 0.00088 23.2 2.4 13 32-44 5-17 (72)
190 2kwj_A Zinc finger protein DPF 32.7 25 0.00085 26.3 2.4 31 34-64 60-91 (114)
191 3asl_A E3 ubiquitin-protein li 32.4 28 0.00096 23.8 2.5 29 85-113 20-49 (70)
192 1twf_I B12.6, DNA-directed RNA 32.2 20 0.00069 27.3 1.9 26 83-108 4-37 (122)
193 3kqi_A GRC5, PHD finger protei 31.8 19 0.00066 24.8 1.6 35 30-65 8-44 (75)
194 1vfy_A Phosphatidylinositol-3- 31.8 26 0.0009 24.0 2.3 31 33-63 12-44 (73)
195 3o7a_A PHD finger protein 13 v 31.1 34 0.0012 21.8 2.6 28 88-115 8-36 (52)
196 3nw0_A Non-structural maintena 30.9 16 0.00056 31.0 1.3 31 83-114 180-210 (238)
197 2dkt_A Ring finger and CHY zin 30.6 37 0.0013 26.9 3.2 22 85-106 103-124 (143)
198 2e6r_A Jumonji/ARID domain-con 30.4 29 0.00099 25.0 2.4 33 82-114 15-48 (92)
199 1wfl_A Zinc finger protein 216 30.3 17 0.00059 25.7 1.1 26 31-57 24-49 (74)
200 3shb_A E3 ubiquitin-protein li 30.3 21 0.00071 25.1 1.5 31 34-64 28-59 (77)
201 1yrk_A NPKC-delta, protein kin 30.2 9.6 0.00033 29.7 -0.3 25 204-234 53-77 (126)
202 1wyh_A SLIM 2, skeletal muscle 30.1 49 0.0017 21.7 3.4 11 33-43 6-16 (72)
203 1x4i_A Inhibitor of growth pro 29.9 26 0.0009 24.0 2.0 35 30-65 4-41 (70)
204 2e6s_A E3 ubiquitin-protein li 29.5 38 0.0013 23.7 2.8 30 85-114 28-58 (77)
205 1bbo_A Human enhancer-binding 29.1 28 0.00094 21.1 1.9 7 98-104 30-36 (57)
206 1wfk_A Zinc finger, FYVE domai 28.9 39 0.0013 24.1 2.9 34 30-63 7-42 (88)
207 2gm5_A Transposon gamma-delta 28.8 24 0.00083 26.9 1.8 24 215-243 49-72 (139)
208 2kwq_A Protein MCM10 homolog; 28.4 22 0.00075 26.1 1.4 60 46-115 15-83 (92)
209 1wff_A Riken cDNA 2810002D23 p 28.0 34 0.0012 24.7 2.3 27 30-57 23-50 (85)
210 1joc_A EEA1, early endosomal a 27.5 35 0.0012 26.0 2.5 34 82-115 68-103 (125)
211 1x68_A FHL5 protein; four-and- 26.5 34 0.0012 23.0 2.1 12 33-44 6-17 (76)
212 1gdt_A GD resolvase, protein ( 26.3 28 0.00095 27.6 1.8 24 215-243 50-73 (183)
213 2ehe_A Four and A half LIM dom 26.0 1.5E+02 0.0051 19.8 6.2 12 84-95 44-55 (82)
214 3f6q_B LIM and senescent cell 25.7 31 0.0011 22.5 1.7 15 31-45 10-24 (72)
215 1wil_A KIAA1045 protein; ring 24.2 17 0.0006 26.4 0.2 34 82-115 14-47 (89)
216 3uk3_C Zinc finger protein 217 24.1 30 0.001 20.9 1.3 10 32-41 4-13 (57)
217 2egq_A FHL1 protein; LIM domai 24.0 27 0.00094 23.4 1.2 12 33-44 16-27 (77)
218 1dvp_A HRS, hepatocyte growth 23.9 41 0.0014 27.8 2.5 32 32-63 161-194 (220)
219 3zyq_A Hepatocyte growth facto 23.9 37 0.0013 28.4 2.2 31 33-63 165-197 (226)
220 3qt1_I DNA-directed RNA polyme 23.9 31 0.0011 26.8 1.6 39 17-56 10-56 (133)
221 3o36_A Transcription intermedi 23.8 49 0.0017 26.5 2.9 29 83-113 4-32 (184)
222 2yqq_A Zinc finger HIT domain- 23.7 43 0.0015 22.3 2.0 23 83-108 12-34 (56)
223 2adr_A ADR1; transcription reg 23.5 38 0.0013 20.7 1.7 7 98-104 31-37 (60)
224 1x4k_A Skeletal muscle LIM-pro 22.8 42 0.0015 22.0 2.0 11 33-43 6-16 (72)
225 2r0q_C Putative transposon TN5 22.6 36 0.0012 27.6 1.9 25 214-243 47-71 (209)
226 1y02_A CARP2, FYVE-ring finger 22.1 42 0.0015 25.6 2.0 33 31-63 18-52 (120)
227 2kgg_A Histone demethylase jar 22.0 70 0.0024 20.2 2.8 31 85-115 4-37 (52)
228 2l3k_A Rhombotin-2, linker, LI 21.3 76 0.0026 23.4 3.4 11 34-44 10-20 (123)
229 1dxg_A Desulforedoxin; non-hem 21.2 32 0.0011 20.5 0.9 14 44-57 4-17 (36)
230 1x64_A Alpha-actinin-2 associa 21.1 82 0.0028 21.7 3.3 28 31-60 24-51 (89)
231 1wih_A Mitochondrial ribosome 20.6 31 0.0011 24.8 0.9 12 227-238 34-45 (84)
232 3pkz_A Recombinase SIN; small 20.6 28 0.00096 25.9 0.7 25 214-243 47-71 (124)
233 1fre_A Nuclear factor XNF7; zi 20.5 56 0.0019 19.3 2.0 33 89-129 6-38 (42)
234 1vd4_A Transcription initiatio 20.3 56 0.0019 20.6 2.1 10 31-40 13-22 (62)
235 3j20_Y 30S ribosomal protein S 20.1 56 0.0019 20.9 2.0 25 32-56 19-47 (50)
No 1
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.94 E-value=5.5e-28 Score=238.48 Aligned_cols=200 Identities=23% Similarity=0.389 Sum_probs=123.5
Q ss_pred CCCEeeeeccCCCcccccccccccCCCC---CcEEeCCCCCccccccccCCCcC----------CCCCCCCcceEeec-C
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSLQG---PAYGCGTCEFSIHKSCAELPLKI----------DHPFHCHPLTLSKT-N 82 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i~g---~~Y~C~~C~F~lH~~Ca~~p~~i----------~hp~H~H~L~L~~~-~ 82 (244)
|.++. .. ...+++|++|+..||| .+|+|..|++.+|++|....... +.+.-.|.+...++ .
T Consensus 38 H~f~~-~~----~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~ 112 (674)
T 3pfq_A 38 HKFTA-RF----FKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSS 112 (674)
T ss_dssp ---------------------------------------------------------------------CCCCCEECCSS
T ss_pred ceEEe-ee----CCCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCC
Confidence 66655 11 3568999999999998 48999999999999999864321 12334789988887 8
Q ss_pred cccccccccCCCCe---eEEcCCccceeccccccCcCccccCccccCCcCccccccccCCCCcEEEEEeccCCcceeeec
Q 043301 83 HHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELKCVLHEVMQSLLEKQPQDVELRTIQERNPEDLTFHD 159 (244)
Q Consensus 83 ~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i~~~~~~h~~H~h~l~L~~~~p~~~~~~~~~~~~~~~~~v~~ 159 (244)
+++|++|++.+.|. +|+|..|++++|.+|....+.+ |+.++...+ |++.+......+.+.++|.+
T Consensus 113 ~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~--C~~d~~~~~----------g~i~~~~~~~~~~L~V~v~~ 180 (674)
T 3pfq_A 113 PTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSL--CGTDHTERR----------GRIYIQAHIDREVLIVVVRD 180 (674)
T ss_dssp CCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSCCC--SSSCSSCCS----------CEEEEEEEECSSEEEEEEEE
T ss_pred CCCCCccccccchhhcCccccccCCcchhhhhhhccCcc--ccccccccc----------ccccccceeccceeeeeeec
Confidence 89999999988774 7999999999999999999888 888888776 77777777778889999999
Q ss_pred ccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhcCCCCccceeEEEEeccCcc
Q 043301 160 VFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRLQNSLRSKNMSVEFWDLDDV 239 (244)
Q Consensus 160 ~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (244)
|. +|.+||++|.+|||+++. +...-....+++|++.-.+++|.||| +|.|.+..++.+++|.|||||||+.
T Consensus 181 a~-~L~~~d~~g~sDPyvkv~-----l~p~~~~~~k~kT~v~~~tlnP~wne---~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 181 AK-NLVPMDPNGLSDPYVKLK-----LIPDPKSESKQKTKTIKSSLNPEWNE---TFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp EE-SCCCCSTTSSCCEEEEEE-----EESCSSCCSCEECCCCSSCSSCEEEE---EEEEECCSTTTTCEEEEEEEECCSS
T ss_pred cc-ccCCCCcccccCcccccc-----cccCccccccccccccccccCCCccc---eeeeecccCCccceeeeEEeecccc
Confidence 97 589999999999998854 11111112456677455577787877 6999999999999999999999999
Q ss_pred ccc
Q 043301 240 LVN 242 (244)
Q Consensus 240 ~~~ 242 (244)
++|
T Consensus 252 ~~d 254 (674)
T 3pfq_A 252 SRN 254 (674)
T ss_dssp SCC
T ss_pred ccc
Confidence 886
No 2
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.47 E-value=1.6e-14 Score=108.57 Aligned_cols=59 Identities=31% Similarity=0.448 Sum_probs=52.6
Q ss_pred CcCCCCCceEeCCCC-CCCEeeeeccCCCcccccccccccCCCCCcEEeCCCCCccccccccCCCc
Q 043301 2 EKQFERDKLKHTSHM-HYLIFNENEVGHDDVVIICDICETSLQGPAYGCGTCEFSIHKSCAELPLK 66 (244)
Q Consensus 2 ~~a~~p~~I~HpsHp-H~L~L~~~~~~~~~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~ 66 (244)
+||++|.+|+|++|| |+|+| ... .++.|++|++.+.|++|+|..|+|+||..||..|..
T Consensus 22 ~Ca~lP~~i~Hp~Hp~H~L~L-~~~-----~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~~ 81 (89)
T 1v5n_A 22 IAKDWPKKVKHVLHEEHELEL-TRV-----QVYTCDKCEEEGTIWSYHCDECDFDLHAKCALNEDT 81 (89)
T ss_dssp HTSSSCSEECCSTTTTSCEEE-ECC-----SSCCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSSC
T ss_pred HHHcCCceecCCCCCCCccEE-eeC-----CCeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCCc
Confidence 489999999999998 99999 332 257899999999999999999999999999998764
No 3
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.46 E-value=1.6e-14 Score=108.71 Aligned_cols=64 Identities=30% Similarity=0.626 Sum_probs=59.5
Q ss_pred CCccccccccCCCcCCCCCC-CCcceEeecCcccccccccCCCCeeEEcCCccceeccccccCcC
Q 043301 53 EFSIHKSCAELPLKIDHPFH-CHPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLHYHCTALKP 116 (244)
Q Consensus 53 ~F~lH~~Ca~~p~~i~hp~H-~H~L~L~~~~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p~ 116 (244)
+..+|+.|+.+|.+|.|+.| .|+|+|....++.|++|++.+.||+|+|..|+|++|+.|+..++
T Consensus 16 ~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 16 EAKYDEIAKDWPKKVKHVLHEEHELELTRVQVYTCDKCEEEGTIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp HHHHHHHTSSSCSEECCSTTTTSCEEEECCSSCCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSS
T ss_pred HHHHhHHHHcCCceecCCCCCCCccEEeeCCCeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCC
Confidence 45899999999999999999 69999987667899999999999999999999999999999884
No 4
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.14 E-value=9.8e-12 Score=99.60 Aligned_cols=90 Identities=22% Similarity=0.294 Sum_probs=71.4
Q ss_pred CCcEEEEEeccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc----cCCCCceeEeecCCCCChhhhhh
Q 043301 140 QDVELRTIQERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE----TGDQGSKVTISESYPYSDDTLAQ 215 (244)
Q Consensus 140 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~----~~~~~~~~~i~~~~~~~~~~~~~ 215 (244)
|.+.+.+....+.|.++|-+|. +|.++|.+|.+|||+++. +.+ ...++|++.-.+.+|.||| +
T Consensus 20 G~l~~~l~~~~~~L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~~~kT~v~~~t~nP~wne---~ 86 (149)
T 1a25_A 20 GRIYIQAHIDREVLIVVVRDAK-NLVPMDPNGLSDPYVKLK---------LIPDPKSESKQKTKTIKCSLNPEWNE---T 86 (149)
T ss_dssp CEEEEEEEESSSEEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------EESCTTCSSCEECCCCSSCSSCEEEE---E
T ss_pred eEEEEEEEecCCEEEEEEEEee-CCCCCCCCCCcCeEEEEE---------EECCCCCcceEecceeCCCCCCcCCc---E
Confidence 6677776666778999999998 589999999999998744 332 2455666444477888887 6
Q ss_pred hhhhcCCCCccceeEEEEeccCccccc
Q 043301 216 FILRLQNSLRSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (244)
|.|.+.+.+.++.|.|+|||||+.+++
T Consensus 87 f~f~v~~~~~~~~L~i~V~d~d~~~~~ 113 (149)
T 1a25_A 87 FRFQLKESDKDRRLSVEIWDWDLTSRN 113 (149)
T ss_dssp EEEECCSGGGGCEEEEEEEECCSSSCC
T ss_pred EEEEeccccCCCEEEEEEEECCCCCCC
Confidence 999999888889999999999998764
No 5
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.13 E-value=1e-11 Score=97.44 Aligned_cols=90 Identities=24% Similarity=0.331 Sum_probs=72.3
Q ss_pred CCcEEEEEeccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc----cCCCCceeEeecCCCCChhhhhh
Q 043301 140 QDVELRTIQERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE----TGDQGSKVTISESYPYSDDTLAQ 215 (244)
Q Consensus 140 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~----~~~~~~~~~i~~~~~~~~~~~~~ 215 (244)
|.+.+.+....+.+.++|-+|. +|.++|.+|.+|||+++. +.+ ....+|++.-.+.+|.||| +
T Consensus 5 G~l~~~l~~~~~~L~v~v~~a~-~L~~~d~~~~~dpyv~v~---------~~~~~~~~~~~kT~~~~~t~nP~wne---~ 71 (137)
T 3rdl_A 5 GRIYLKAEVTDEKLHVTVRDAK-NLIPMDPNGLSDPYVKLK---------LIPDPKNESKQKTKTIRSTLNPQWNE---S 71 (137)
T ss_dssp CEEEEEEEEETTEEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------EECCTTCCCCEECCCCCSCSSCEEEE---E
T ss_pred eEEEEEEEEcCCEEEEEEEEee-CCCCCCCCCCCCeeEEEE---------EEcCCCCCeeecCceEcCCCCCCccc---E
Confidence 7777877777889999999997 589999999999998743 322 2345666444477888887 7
Q ss_pred hhhhcCCCCccceeEEEEeccCccccc
Q 043301 216 FILRLQNSLRSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (244)
|.|.+.+++.++.|.|+|||||+.+++
T Consensus 72 f~f~~~~~~~~~~l~i~v~d~d~~~~~ 98 (137)
T 3rdl_A 72 FTFKLKPSDKDRRLSVEIWDWDRTTRN 98 (137)
T ss_dssp EEEECCGGGGGCEEEEEEEECCSSSCC
T ss_pred EEEEcCchhcCCEEEEEEEECCCCCCC
Confidence 999999988889999999999988765
No 6
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.11 E-value=4.1e-12 Score=103.71 Aligned_cols=90 Identities=7% Similarity=0.054 Sum_probs=68.5
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc-----cCCCCceeEeecCCCCChhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE-----TGDQGSKVTISESYPYSDDT 212 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~-----~~~~~~~~~i~~~~~~~~~~ 212 (244)
|++++...- ..+.|.+.|-+|. +|.+||.+|.+|||+++. |.+ ..+++|++.-.++||.|||
T Consensus 30 G~l~~sl~y~~~~~~L~V~Vi~a~-~L~~~d~~g~sDPyVkv~---------l~~~~~~~~~~~kT~v~~~tlnP~wnE- 98 (155)
T 2z0u_A 30 TRIQIALKYDEKNKQFAILIIQLS-NLSALLQQQDQKVNIRVA---------VLPCSESTTCLFRTRPLDASDTLVFNE- 98 (155)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEE-CGGGTCCSCCSEEEEEEE---------EESCSCHHHHEEECCCEECCSSEEEEE-
T ss_pred EEEEEEEEEcCCCCEEEEEEEEcc-CcCCcccCCCCCEEEEEE---------EecCCCCCccceeCCcCCCCCCCcccc-
Confidence 445554443 3567889999998 589999999999998743 433 1357788555678888887
Q ss_pred hhhhhhhcCCCC-ccceeEEEEeccCccccc
Q 043301 213 LAQFILRLQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+..++ .++.|.|+|||||+.++|
T Consensus 99 --~F~f~v~~~~l~~~~L~~~V~d~d~~~~~ 127 (155)
T 2z0u_A 99 --VFWVSMSYPALHQKTLRVDVCTTDRSHLE 127 (155)
T ss_dssp --EEEEECCHHHHHHCEEEEEEEEECTTSCE
T ss_pred --EEEEEcCHHHhCcCEEEEEEEECCCCCCC
Confidence 6999987765 478899999999998876
No 7
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.04 E-value=4e-11 Score=96.66 Aligned_cols=88 Identities=16% Similarity=0.104 Sum_probs=66.9
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+++.... ..+.|.++|-+|. +|.++| +|.+|||+++. |.+. .+++|++.-.+.+|.|||
T Consensus 14 G~~~lsL~y~~~~~~L~V~v~~a~-~L~~~d-~g~~Dpyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wne-- 80 (153)
T 3fbk_A 14 GAGQLRLSIDAQDRVLLLHIIEGK-GLISKQ-PGTCDPYVKIS---------LIPEDSRLRHQKTQTVPDCRDPAFHE-- 80 (153)
T ss_dssp CCCEEEEEEEESSSEEEEEEEEEE-SCCCCS-SSCCCEEEEEE---------EESCSCCTTCEECCCCTTCSSCEEEE--
T ss_pred CEEEEEEEEECCCCEEEEEEEEee-CCCCCC-CCCCCEEEEEE---------EEcCCCCccEEeccccCCCCCCcccc--
Confidence 556555544 5778999999997 589999 79999998743 3222 345566334477788887
Q ss_pred hhhhhhcCCCCccceeEEEEeccCcccc
Q 043301 214 AQFILRLQNSLRSKNMSVEFWDLDDVLV 241 (244)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (244)
+|.|.+.+++.+++|.|+|||||+.++
T Consensus 81 -~f~f~v~~~~~~~~L~i~V~d~d~~~~ 107 (153)
T 3fbk_A 81 -HFFFPVQEEDDQKRLLVTVWNRASQSR 107 (153)
T ss_dssp -EEEEECCGGGTTSEEEEEEEECCSSGG
T ss_pred -EEEEecccHHhCCEEEEEEEeCCCCCC
Confidence 699999888888889999999999765
No 8
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.99 E-value=2.6e-11 Score=95.92 Aligned_cols=90 Identities=16% Similarity=0.193 Sum_probs=68.7
Q ss_pred CCcEEEEEeccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc-------------CCCCceeEeecCC
Q 043301 140 QDVELRTIQERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET-------------GDQGSKVTISESY 206 (244)
Q Consensus 140 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~i~~~~ 206 (244)
|++.+.+.-..+.+.++|-+|. +|.++|.+|.+|||+++. +.+. .+++|++.-.+.+
T Consensus 7 G~i~~~l~y~~~~L~V~v~~a~-~L~~~d~~g~~Dpyv~v~---------~~~~~~~~~~~~~~~~~~~~kT~v~~~t~n 76 (142)
T 1rh8_A 7 GEIQLQINYDLGNLIIHILQAR-NLVPRDNNGYSDPFVKVY---------LLPGRGQVMVVQNASAEYKRRTKYVQKSLN 76 (142)
T ss_dssp CEEEEEEEEETTEEEEEEEEEE-SCCCCSSSSCSCCEEEEE---------ETTSSCCCEECCCCCHHHHTTTTTTHHHHS
T ss_pred eEEEEEEEEcCCEEEEEEEEec-CCCCCCCCCCCCceEEEE---------EecCCCcccccccccccceeeccccCCCCC
Confidence 6677776666778999999998 589999999999998744 2222 2456664445778
Q ss_pred CCChhhhhhhhhh-cCCCC-ccceeEEEEeccCccccc
Q 043301 207 PYSDDTLAQFILR-LQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 207 ~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
|.||| +|.|. +..++ .++.|.|+|||||+.+++
T Consensus 77 P~wne---~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~ 111 (142)
T 1rh8_A 77 PEWNQ---TVIYKSISMEQLMKKTLEVTVWDYDRFSSN 111 (142)
T ss_dssp CEEEE---EEEECSCCHHHHTTCEEEEEEEEECSSSCE
T ss_pred CCCCC---EEEECCcCHHHccCCEEEEEEEECCCCCCC
Confidence 88887 69987 66655 578999999999998764
No 9
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.99 E-value=8.6e-11 Score=93.24 Aligned_cols=87 Identities=6% Similarity=0.009 Sum_probs=64.1
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc---cCCCCceeEeecCCCCChhhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE---TGDQGSKVTISESYPYSDDTLA 214 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~---~~~~~~~~~i~~~~~~~~~~~~ 214 (244)
|++++.+.. ..+.|.++|-+|. +||.+|.+|||+++. |.+ ...++|++.-.+.+|.|||
T Consensus 13 G~l~~sl~y~~~~~~L~V~v~~a~----~~d~~g~sDPyv~v~---------l~~~~~~~~~kT~v~~~tlnP~wnE--- 76 (138)
T 1wfm_A 13 PKLHYCLDYDCQKAELFVTRLEAV----TSNHDGGCDCYVQGS---------VANRTGSVEAQTALKKRQLHTTWEE--- 76 (138)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE----CCCCSSCCCEEEEEE---------EEETTEEEEEECCCCCCCSSEECSS---
T ss_pred eEEEEEEEEeCCCCEEEEEEEEEE----cCCCCCCcceEEEEE---------EEcCCCcccEecccCcCCCCCcCCc---
Confidence 555555544 3556778888886 589999999998843 322 2345677444577888887
Q ss_pred hhhhhcCCCCc-cceeEEEEeccCccccc
Q 043301 215 QFILRLQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+..++. ++.|.|+|||||+.++|
T Consensus 77 ~f~f~v~~~~l~~~~L~~~V~d~d~~~~d 105 (138)
T 1wfm_A 77 GLVLPLAEEELPTATLTLTLRTCDRFSRH 105 (138)
T ss_dssp CEEEECCTTSSTTCEEEEEEEECCSSCTT
T ss_pred eEEEEecHHHcCCCEEEEEEEECCCCCCC
Confidence 69999987765 68899999999998775
No 10
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=98.98 E-value=6.5e-11 Score=93.62 Aligned_cols=88 Identities=9% Similarity=0.124 Sum_probs=65.6
Q ss_pred CcEEEEEeccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc----cCCCCceeEeecCCCCChhhhhhh
Q 043301 141 DVELRTIQERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE----TGDQGSKVTISESYPYSDDTLAQF 216 (244)
Q Consensus 141 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~----~~~~~~~~~i~~~~~~~~~~~~~~ 216 (244)
-+.++.....+.|.++|-+|.+ |.+ |.+|.+|||+++. +.+ ..+++|++.-.+.+|.||| +|
T Consensus 10 ~~~~~~~~~~~~L~V~V~~a~~-L~~-~~~g~~DPyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wnE---~f 75 (134)
T 2b3r_A 10 AVKLSVSYRNGTLFIMVMHIKD-LVT-EDGADPNPYVKTY---------LLPDTHKTSKRKTKISRKTRNPTFNE---ML 75 (134)
T ss_dssp EEEEEEEEETTEEEEEEEEEEC-CCC-TTSCCCCEEEEEE---------EESCSSSCCCEECCCCCSCSSCEEEE---EE
T ss_pred EEEEEEeecCCEEEEEEEEeeC-CCC-CCCCCCCeEEEEE---------EEcCCCCCceecCCcCcCCCCCCCcc---EE
Confidence 3455555668889999999985 554 8899999998743 322 2455677444577888887 69
Q ss_pred hhh-cCCCC-ccceeEEEEeccCccccc
Q 043301 217 ILR-LQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 217 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
.|. +..++ .++.|.|+|||||+.++|
T Consensus 76 ~f~~v~~~~l~~~~L~~~V~d~d~~~~~ 103 (134)
T 2b3r_A 76 VYSGYSKETLRQRELQLSVLSAESLREN 103 (134)
T ss_dssp EEESCCHHHHTTCEEEEEEEECCSSSCC
T ss_pred EECCcCHHHhCcCEEEEEEEECCCCCCC
Confidence 998 77665 678999999999998775
No 11
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.95 E-value=4.6e-10 Score=88.26 Aligned_cols=89 Identities=11% Similarity=0.183 Sum_probs=66.4
Q ss_pred CCcEEEEEec--cCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc----cCCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQE--RNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE----TGDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~----~~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+.+.+... .+.|.++|-+|. +|.++|.+|.+|||+++. +.+ ...++|++.-.+.+|.|||
T Consensus 8 G~i~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~~~kT~~~~~t~nP~wne-- 75 (141)
T 1v27_A 8 GQLSIKLWFDKVGHQLIVTILGAK-DLPSREDGRPRNPYVKIY---------FLPDRSDKNKRRTKTVKKTLEPKWNQ-- 75 (141)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCCSSSCCCCEEEECC---------CSSCCSSSSCCBCCCCSSCSSCCCCC--
T ss_pred cEEEEEEEEeCCCCEEEEEEEEcc-CCCCcCCCCCCCCEEEEE---------EecCCCCCcceeCccccCCCCCcccc--
Confidence 5666665543 556889999998 489999999999998744 322 3456677445577899988
Q ss_pred hhhhhhc-CCC-CccceeEEEEeccCcccc
Q 043301 214 AQFILRL-QNS-LRSKNMSVEFWDLDDVLV 241 (244)
Q Consensus 214 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 241 (244)
+|.|.+ ..+ ..++.|.|+|||||+.++
T Consensus 76 -~f~f~~~~~~~~~~~~l~i~V~d~d~~~~ 104 (141)
T 1v27_A 76 -TFIYSPVHRREFRERMLEITLWDQARVRE 104 (141)
T ss_dssp -CCEECSCCTTGGGTCEEEEEEEEBCSSSS
T ss_pred -EEEEccCCHHHhcCCEEEEEEEECCCCcC
Confidence 699985 433 367899999999999875
No 12
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=98.95 E-value=1.4e-10 Score=94.50 Aligned_cols=90 Identities=13% Similarity=0.197 Sum_probs=67.9
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc----cCCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE----TGDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~----~~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+.+.+.. ..+.+.++|-+|. +|.++|.+|.+|||+++. +.+ ...++|++.-.+.+|.|||
T Consensus 24 G~l~~~l~y~~~~~~L~V~v~~a~-~L~~~d~~g~~DPyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wne-- 91 (166)
T 2cm5_A 24 GKILVSLMYSTQQGGLIVGIIRCV-HLAAMDANGYSDPFVKLW---------LKPDMGKKAKHKTQIKKKTLNPEFNE-- 91 (166)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------EETC---CCEEECCCCCSCSSCEEEE--
T ss_pred ceEEEEEEEECCCCEEEEEEEEeE-CCCCccCCCCCCcEEEEE---------EECCCCccceEeCCcccCCCCCcccc--
Confidence 555555544 3567889999997 589999999999998743 332 2455666444577888887
Q ss_pred hhhhhhcCCCCc-cceeEEEEeccCccccc
Q 043301 214 AQFILRLQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+...+. ++.|.|+|||||+.+++
T Consensus 92 -~f~f~v~~~~l~~~~L~i~V~d~d~~~~~ 120 (166)
T 2cm5_A 92 -EFFYDIKHSDLAKKSLDISVWDYDIGKSN 120 (166)
T ss_dssp -EEEEECCGGGGGGCEEEEEEEECCSSSCC
T ss_pred -eEEEEcchHhcCCCEEEEEEEECCCCCCC
Confidence 69999987664 78999999999998764
No 13
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=98.94 E-value=1.6e-10 Score=92.32 Aligned_cols=90 Identities=11% Similarity=0.174 Sum_probs=67.2
Q ss_pred CCcEEEEEec--cCCcceeeecccccccccC-CCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhh
Q 043301 140 QDVELRTIQE--RNPEDLTFHDVFSSFTEKD-RNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDT 212 (244)
Q Consensus 140 ~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~-~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~ 212 (244)
|.+.+.+... .+.+.++|-+|. +|.++| .+|.+|||+++. |.+. .+++|++.-.+.+|.|||
T Consensus 10 G~l~~sl~y~~~~~~L~V~v~~a~-~L~~~d~~~~~~dpyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wne- 78 (148)
T 3fdw_A 10 GRIAFSLKYEQQTQSLVVHVKECH-QLAYADEAKKRSNPYVKTY---------LLPDKSRQGKRKTSIKRDTVNPLYDE- 78 (148)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCSBTTTTBCCEEEEEE---------EETCCSGGGEEECCCCSSCSSCEEEE-
T ss_pred eEEEEEEEEeCCCCEEEEEEEEec-CCCCcccCCCCCCeEEEEE---------EEcCCcccCccccccCCCCCCCcEee-
Confidence 6666665543 567889999997 489999 589999998743 3332 245666444477888887
Q ss_pred hhhhhhhcCCCCc-cceeEEEEeccCccccc
Q 043301 213 LAQFILRLQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 213 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+..++. ++.|.|+|||||+.++|
T Consensus 79 --~f~f~v~~~~~~~~~L~~~V~d~d~~~~~ 107 (148)
T 3fdw_A 79 --TLRYEIPESLLAQRTLQFSVWHHGRFGRN 107 (148)
T ss_dssp --EEEEECCSTTGGGCEEEEEEEEECGGGCE
T ss_pred --EEEEEeChhHhCceEEEEEEEECCCCcCC
Confidence 69999988774 67899999999998765
No 14
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=98.93 E-value=1.3e-10 Score=93.16 Aligned_cols=90 Identities=10% Similarity=0.090 Sum_probs=61.4
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+.+.+.. ..+.|.+.|-+|. +|.++|.+|.+|||+++. +.+. .+++|++.-.+.+|.|||
T Consensus 17 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~~~kT~v~~~t~nP~wne-- 84 (153)
T 1w15_A 17 GELLVSLCYQSTTNTLTVVVLKAR-HLPKSDVSGLSDPYVKVN---------LYHAKKRISKKKTHVKKCTPNAVFNE-- 84 (153)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCC------CCCEEEEEE---------EEETTEEEEEEECCCCCSCSSEEEEE--
T ss_pred cEEEEEEEEcCCCCEEEEEEEEeE-CCCCcCCCCCCCeEEEEE---------EEeCCeEeceEecCcccCCCCCeecc--
Confidence 555555544 4567889999997 589999999999998744 3222 245677444577788887
Q ss_pred hhhhhhcCCCCc-cceeEEEEeccCccccc
Q 043301 214 AQFILRLQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+...+. ++.|.|+|||||+.+++
T Consensus 85 -~f~f~v~~~~l~~~~l~v~V~d~d~~~~~ 113 (153)
T 1w15_A 85 -LFVFDIPCESLEEISVEFLVLDSERGSRN 113 (153)
T ss_dssp -EEEEECCSSSSTTEEEEEEEEECCTTSCC
T ss_pred -eEEEECCHHHhCceEEEEEEEeCCCCCCC
Confidence 79999988765 48899999999988765
No 15
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=2.4e-10 Score=90.48 Aligned_cols=90 Identities=13% Similarity=0.108 Sum_probs=66.0
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc--CCCCceeEeecCCCCChhhhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET--GDQGSKVTISESYPYSDDTLAQ 215 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~--~~~~~~~~i~~~~~~~~~~~~~ 215 (244)
|.+.+.+.. ..+.|.++|-+|. +|.++|.+|.+|||+++. +.+. ..++|++.-.+.+|.||| +
T Consensus 13 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~kT~v~~~t~nP~wne---~ 79 (141)
T 2d8k_A 13 GRIQFSVGYNFQESTLTVKIMKAQ-ELPAKDFSGTSDPFVKIY---------LLPDKKHKLETKVKRKNLNPHWNE---T 79 (141)
T ss_dssp CEEEEEEEECSSSCCEEEEEEEEE-SCCCCSSSSCCCEEEEEE---------EESCCSSEEECCCCTTCSSCCCCE---E
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeE-CCCCCCCCCCCCcEEEEE---------EECCCCccEeCceEcCCCCCcccc---E
Confidence 556665554 4677889999998 589999999999998743 3322 345566434477898987 6
Q ss_pred hhhhcCCC--CccceeEEEEeccCccccc
Q 043301 216 FILRLQNS--LRSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 216 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 242 (244)
|.|.+-+. ..++.|.|+|||||+.+++
T Consensus 80 f~f~~~~~~~~~~~~l~i~V~d~d~~~~~ 108 (141)
T 2d8k_A 80 FLFEGFPYEKVVQRILYLQVLDYDRFSRN 108 (141)
T ss_dssp EEECSCCHHHHTTSEEEEEEEECCSSSSC
T ss_pred EEECccCHHHcccCEEEEEEEECCCCCCC
Confidence 99986443 2468899999999998765
No 16
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.91 E-value=2.6e-10 Score=89.92 Aligned_cols=90 Identities=10% Similarity=0.097 Sum_probs=66.6
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCC-CcchhhHHHHhhhhcccccccc--cCCCCceeEeecCCCCChhhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRN-QLDDITENIESEIAGIKKTLSE--TGDQGSKVTISESYPYSDDTLA 214 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n-~l~d~~~~~~~~~~~~~~~l~~--~~~~~~~~~i~~~~~~~~~~~~ 214 (244)
|.+.+.+.. ..+.|.++|-+|. +|.++|.+ |.+|||+++. +.+ ...++|++.-.+.+|.|||
T Consensus 9 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~~~~~dpyv~v~---------~~~~~~~~~kT~v~~~t~nP~wne--- 75 (138)
T 1ugk_A 9 GTLFFSLEYNFERKAFVVNIKEAR-GLPAMDEQSMTSDPYIKMT---------ILPEKKHKVKTRVLRKTLDPAFDE--- 75 (138)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEEE-SCCCCBTTTTBCEEEEEEE---------EETTTCSEEECCCCSSCSSCEEEE---
T ss_pred EEEEEEEEEECCCCEEEEEEEEee-CCCCCCCCCCCCCCEEEEE---------EecCCCceEecCcCcCCCCCcEee---
Confidence 556665544 4667889999997 58999996 9999998743 332 2455666444577888887
Q ss_pred hhhhh-cCCCC-ccceeEEEEeccCccccc
Q 043301 215 QFILR-LQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 215 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
+|.|. +..++ .++.|.|+|||||+.++|
T Consensus 76 ~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~ 105 (138)
T 1ugk_A 76 TFTFYGIPYTQIQELALHFTILSFDRFSRD 105 (138)
T ss_dssp EEEEECCCSTTGGGCEEEEEEEEECSSCCC
T ss_pred EEEEcCcCHHHhccCEEEEEEEECCCCCCC
Confidence 69995 76655 468999999999998776
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.90 E-value=1.4e-10 Score=93.27 Aligned_cols=90 Identities=14% Similarity=0.127 Sum_probs=65.9
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc--CCCCceeEeecCCCCChhhhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET--GDQGSKVTISESYPYSDDTLAQ 215 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~--~~~~~~~~i~~~~~~~~~~~~~ 215 (244)
|.+.+...- ....|.++|-+|. +|.++|.+|.+|||+++. +.+. ...+|++.-.+.+|.||| +
T Consensus 29 G~l~~~l~y~~~~~~L~V~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~kT~v~~~t~nP~wne---~ 95 (152)
T 1rsy_A 29 GKLQYSLDYDFQNNQLLVGIIQAA-ELPALDMGGTSDPYVKVF---------LLPDKKKKFETKVHRKTLNPVFNE---Q 95 (152)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------EETTCCSCEECCCCTTCSSCEEEE---E
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeE-CCCCccCCCCcCeEEEEE---------EEcCCCceEeccccCCCCCCcCcc---c
Confidence 555555543 3567889999997 589999999999998743 3222 344566334467788887 6
Q ss_pred hhhhcCCCC-ccceeEEEEeccCccccc
Q 043301 216 FILRLQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
|.|.+...+ .++.|.|+|||||+.+++
T Consensus 96 f~f~v~~~~l~~~~L~i~V~d~d~~~~~ 123 (152)
T 1rsy_A 96 FTFKVPYSELGGKTLVMAVYDFDRFSKH 123 (152)
T ss_dssp EEECCCHHHHTTCEEEEEEEECCSSSCC
T ss_pred EEEeecHHHcCCCEEEEEEEECCCCCCC
Confidence 999987665 368999999999998765
No 18
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=98.89 E-value=2.5e-10 Score=89.31 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=66.1
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+.+.... ..+.+.++|-+|. +|.++|.+|.+|||+++. +.+. .+++|++.-.+.+|.|||
T Consensus 3 G~l~~sl~y~~~~~~L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~~~kT~~~~~t~nP~wne-- 70 (138)
T 3n5a_A 3 GELLLSLCYNPSANSIIVNIIKAR-NLKAMDIGGTSDPYVKVW---------LMYKDKRVEKKKTVTKKRNLNPIFNE-- 70 (138)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCCBTTTBCCEEEEEE---------EEETTEEEEEEECCCCSSCSSCEEEE--
T ss_pred cEEEEEEEEcCCCCeEEEEEEEee-CCCCcCCCCCcCeEEEEE---------EEeCCCccceEeCccccCCCCCcCcc--
Confidence 555555544 3566789999997 589999999999998743 3322 345566344467788887
Q ss_pred hhhhhhcCCCC-ccceeEEEEeccCccccc
Q 043301 214 AQFILRLQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+..++ .++.|.|+|||+|+.+++
T Consensus 71 -~f~f~v~~~~l~~~~l~~~V~d~~~~~~~ 99 (138)
T 3n5a_A 71 -SFAFDIPTEKLRETTIIITVMDKDKLSRN 99 (138)
T ss_dssp -EEEEECCGGGGGGEEEEEEEEECCSSSCC
T ss_pred -eEEEECChhhcCceEEEEEEEECCCCCCC
Confidence 7999988776 467899999999998765
No 19
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=98.89 E-value=7.1e-11 Score=97.08 Aligned_cols=77 Identities=6% Similarity=0.107 Sum_probs=56.5
Q ss_pred cCCcceeeecccccccccCC----------CCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhh
Q 043301 150 RNPEDLTFHDVFSSFTEKDR----------NQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILR 219 (244)
Q Consensus 150 ~~~~~~~v~~~~~~~~~~~~----------n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 219 (244)
.+.|.++|-+|. +|.+||. +|.+|||++++ |......+|++.-.++||.||| +|.|.
T Consensus 28 ~g~L~V~VieA~-~L~~~D~~~~~~~f~~~~g~sDPYv~v~---------l~~~~~~kT~v~~ktlnP~WNE---~F~f~ 94 (157)
T 2fk9_A 28 NGYLRVRIGEAV-GLQPTRWSLRHSLFKKGHQLLDPYLTVS---------VDQVRVGQTSTKQKTNKPTYNE---EFCAN 94 (157)
T ss_dssp EEEEEEEEEEEE-CCCCCHHHHHTTTSSSSCCCCCEEEEEE---------ETTEEEEECCCCSSCSSCEEEE---EEEEE
T ss_pred ccEEEEEEEEEE-CCCCccccccccccccCCCCCCeEEEEE---------ECCEeeEEeeecCCCCCCccCc---EEEEE
Confidence 456779999997 5899993 48899998844 3333223556333467788887 69998
Q ss_pred cCCCCccceeEEEEeccCccccc
Q 043301 220 LQNSLRSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~ 242 (244)
+.. .+.|.|+|||||+.+++
T Consensus 95 v~~---~~~L~~~V~D~d~~~~d 114 (157)
T 2fk9_A 95 VTD---GGHLELAVFHETPLGYD 114 (157)
T ss_dssp EEE---ECEEEEEEEECCSSSSC
T ss_pred cCC---CCEEEEEEEECCCCCCC
Confidence 854 46899999999998765
No 20
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=98.89 E-value=1.3e-10 Score=91.99 Aligned_cols=90 Identities=14% Similarity=0.145 Sum_probs=67.0
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc----cCCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE----TGDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~----~~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+.+...- ..+.|.++|-+|. +|.++|.+|.+|||+++. +.+ ...++|++.-.+.+|.|||
T Consensus 16 G~l~~~l~y~~~~~~L~V~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~~~kT~v~~~t~nP~wne-- 83 (142)
T 2chd_A 16 GALEFSLLYDQDNSNLQCTIIRAK-GLKPMDSNGLADPYVKLH---------LLPGASKSNKLRTKTLRNTRNPVWNE-- 83 (142)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEEE-SCCCCCTTSCCCEEEEEE---------EESCCSGGGEEECCCCCSCSSCEEEE--
T ss_pred ceEEEEEEEeCCCCEEEEEEEEec-CCCCCCCCCCCCCEEEEE---------EEcCCCCcceeeCCcCCCCCCCcCcC--
Confidence 555555544 4667889999997 589999999999998744 332 2455666444577888887
Q ss_pred hhhhhh-cCCCCc-cceeEEEEeccCccccc
Q 043301 214 AQFILR-LQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 214 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
+|.|. +..++. .+.|.|+|||||+.+++
T Consensus 84 -~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d 113 (142)
T 2chd_A 84 -TLQYHGITEEDMQRKTLRISVCDEDKFGHN 113 (142)
T ss_dssp -EEEEESCCHHHHHHCEEEEEEEEECTTSCE
T ss_pred -EEEEcccCHHHccCCEEEEEEEECCCCCCC
Confidence 69998 666655 47899999999998764
No 21
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.88 E-value=1.6e-10 Score=91.59 Aligned_cols=90 Identities=14% Similarity=0.127 Sum_probs=66.7
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc--cCCCCceeEeecCCCCChhhhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE--TGDQGSKVTISESYPYSDDTLAQ 215 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~--~~~~~~~~~i~~~~~~~~~~~~~ 215 (244)
|.+.+.... ..+.+.++|-+|. +|.++|.+|.+|||+++. |.+ ....+|++.-.+.+|.||| +
T Consensus 21 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------l~~~~~~~~kT~v~~~t~nP~wne---~ 87 (143)
T 3f04_A 21 GKLQYSLDYDFQNNQLLVGIIQAA-ELPALDMGGTSDPYVKVF---------LLPDKKKKFETKVHRKTLNPVFNE---Q 87 (143)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-CCCCBGGGBCCCEEEEEE---------EESCCSCCEECCCCCSCSSCEEEE---E
T ss_pred EEEEEEEEEeCCCCEEEEEEEEec-CCCCCCCCCCcCcEEEEE---------EECCCCccEECccCcCCCCCcCcC---e
Confidence 555555544 4667889999997 589999999999998743 322 2345566444467788887 6
Q ss_pred hhhhcCCCC-ccceeEEEEeccCccccc
Q 043301 216 FILRLQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
|.|.+...+ .++.|.|+|||||+.++|
T Consensus 88 f~f~v~~~~l~~~~L~i~V~d~d~~~~~ 115 (143)
T 3f04_A 88 FTFKVPYSELGGKTLVMAVYDFDRFSKH 115 (143)
T ss_dssp EEECCCHHHHTTCEEEEEEEECCSSSCC
T ss_pred EEEeecHhhcCCCEEEEEEEeCCCCCCC
Confidence 999987765 468999999999998765
No 22
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.88 E-value=3.3e-10 Score=93.20 Aligned_cols=88 Identities=13% Similarity=0.195 Sum_probs=66.2
Q ss_pred CCcEEEEEeccCCcceeeecccccccccCC-CCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhhh
Q 043301 140 QDVELRTIQERNPEDLTFHDVFSSFTEKDR-NQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTLA 214 (244)
Q Consensus 140 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~~ 214 (244)
|.+.+.+....+.+.++|-+|. +|.++|. +|.+|||+++. +.+. ..++|++.-.+.+|.|||
T Consensus 19 G~l~~~l~y~~~~L~V~v~~a~-~L~~~d~~~g~~DPyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wne--- 85 (171)
T 2q3x_A 19 GDIQIGMEDKKGQLEVEVIRAR-SLTQKPGSKSTPAPYVKVY---------LLENGACIAKKKTRIARKTLDPLYQQ--- 85 (171)
T ss_dssp CEEEEEEEEETTEEEEEEEEEE-SCCCCC---CCCEEEEEEE---------EEETTEEEEEEECCCCCSCSSCEEEE---
T ss_pred cEEEEEEEECCCEEEEEEEEee-CCCCCCcCCCCCCceEEEE---------EECCCccccceeCccCCCCCCCCCCc---
Confidence 6777777667788999999998 5899996 79999998743 3322 255666444467788887
Q ss_pred hhhhhcCCCCccceeEEEEe-ccCccccc
Q 043301 215 QFILRLQNSLRSKNMSVEFW-DLDDVLVN 242 (244)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (244)
+|.|.+.+. +..|.|+|| |||+.++|
T Consensus 86 ~f~f~v~~~--~~~L~~~V~~d~d~~~~d 112 (171)
T 2q3x_A 86 SLVFDESPQ--GKVLQVIVWGDYGRMDHK 112 (171)
T ss_dssp EEECSSCCT--TEEEEEEEEEECSTTCSS
T ss_pred EEEEEecCC--CCEEEEEEEEcCCCCCCC
Confidence 699998654 689999999 99998775
No 23
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=2.2e-10 Score=90.70 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=64.7
Q ss_pred CCcEEEEEec--cCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQE--RNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+++.+... .+.|.+.|-+|. +|.++|.+| +|||+++. |.+. .+++|++.-.+.+|.|||
T Consensus 11 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~g-~dpyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wne-- 77 (142)
T 2dmg_A 11 GQIQLTIRHSSQRNKLIVVVHACR-NLIAFSEDG-SDPYVRMY---------LLPDKRRSGRRKTHVSKKTLNPVFDQ-- 77 (142)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-CCCCSSTTC-CCEEEEEE---------EESCCCSSSCEECCCCCSCSSCEEEE--
T ss_pred ceEEEEEEEeCCCCEEEEEEEEeE-CCCCCCCCC-CCeeEEEE---------EEcCCCCCCcccCCccCCCCCCCcCc--
Confidence 6666665544 667889999997 589999999 99998743 3222 345666444577888887
Q ss_pred hhhhhhcCCCCc-cceeEEEEeccCccc
Q 043301 214 AQFILRLQNSLR-SKNMSVEFWDLDDVL 240 (244)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (244)
+|.|.+...+. ++.|.|+|||||+..
T Consensus 78 -~f~f~v~~~~l~~~~L~i~V~d~d~~~ 104 (142)
T 2dmg_A 78 -SFDFSVSLPEVQRRTLDVAVKNSGGFL 104 (142)
T ss_dssp -EEEECCCHHHHHHCEEEEEEEECCCSS
T ss_pred -eEEEEecHHHhCcCEEEEEEEECCCcc
Confidence 69999877654 469999999999864
No 24
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=98.87 E-value=4e-10 Score=91.04 Aligned_cols=90 Identities=14% Similarity=0.181 Sum_probs=66.9
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+.+.+.- ..+.+.++|-+|. +|.++|.+|.+|||+++. +.+. ...+|++.-.+.+|.|||
T Consensus 12 G~l~~~l~y~~~~~~L~V~v~~a~-~L~~~d~~g~~dpyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wne-- 79 (159)
T 1tjx_A 12 GDICFSLRYVPTAGKLTVVILEAK-NLKKMDVGGLSDPYVKIH---------LMQNGKRLKKKKTTIKKNTLNPYYNE-- 79 (159)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------EEETTEEEEEEECCCCCSCSSCEEEE--
T ss_pred CeEEEEEEEcCCCCEEEEEEEEee-CCCCccCCCCCCeEEEEE---------EEeCCceeceeeCceecCCCCCcccc--
Confidence 666666544 4567889999998 589999999999998744 3221 244566444467788887
Q ss_pred hhhhhhcCCCCc-cceeEEEEeccCccccc
Q 043301 214 AQFILRLQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+...+. ++.|.|+|||||+.+++
T Consensus 80 -~f~f~v~~~~l~~~~l~i~V~d~d~~~~~ 108 (159)
T 1tjx_A 80 -SFSFEVPFEQIQKVQVVVTVLDYDKIGKN 108 (159)
T ss_dssp -EEEEECCGGGGGGCEEEEEEEECCSSSCC
T ss_pred -eEEEEcCHHHhCCcEEEEEEEECCCCCCC
Confidence 79999977664 57899999999998765
No 25
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=3.4e-10 Score=90.23 Aligned_cols=90 Identities=9% Similarity=0.084 Sum_probs=65.4
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccc-cCCCC------cchhhHHHHhhhhccccccccc--CCCCceeEeecCCCC
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTE-KDRNQ------LDDITENIESEIAGIKKTLSET--GDQGSKVTISESYPY 208 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~~n~------l~d~~~~~~~~~~~~~~~l~~~--~~~~~~~~i~~~~~~ 208 (244)
|.+++...- ..+.|.++|-+|.+ |.+ ||.|| .+|||+++. |.+. ..++|++.-.+.+|.
T Consensus 13 G~l~~~l~y~~~~~~L~V~v~~a~~-L~~~~d~~g~~~~~~~~dpyv~v~---------l~~~~~~~~kT~v~~~t~nP~ 82 (147)
T 2enp_A 13 GMLHFSTQYDLLHNHLTVRVIEARD-LPPPISHDGSRQDMAHSNPYVKIC---------LLPDQKNSKQTGVKRKTQKPV 82 (147)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEEC-CCCSCSSCCSSCTTCCCCCEEEEE---------EETCCSSCEECCCCCSCSSCC
T ss_pred eEEEEEEEEcCCCCEEEEEEEEEeC-CCCccccccccccCCCCCcEEEEE---------EEeCCCcceEeecccCCCCCe
Confidence 555555543 35668899999985 666 78886 799998743 3332 345666444577898
Q ss_pred ChhhhhhhhhhcCCCC-ccceeEEEEeccCccccc
Q 043301 209 SDDTLAQFILRLQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 209 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
||| +|.|.+...+ .++.|.|+|||||+.+++
T Consensus 83 wne---~f~f~v~~~~l~~~~L~~~V~d~d~~~~~ 114 (147)
T 2enp_A 83 FEE---RYTFEIPFLEAQRRTLLLTVVDFDKFSRH 114 (147)
T ss_dssp CCB---CCEECCCHHHHHHSEEEEEEECCSTTCCS
T ss_pred Eee---eEEEEeChHHhccCEEEEEEEECCCCcCC
Confidence 987 6999988765 457999999999998775
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.85 E-value=4.6e-10 Score=87.14 Aligned_cols=93 Identities=12% Similarity=0.168 Sum_probs=60.6
Q ss_pred CCcEEEEEec--cCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhh
Q 043301 140 QDVELRTIQE--RNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFI 217 (244)
Q Consensus 140 ~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 217 (244)
|.+.+.+.-. .+.+.++|-+|. +|.++|.+|.+|||+++.- ...-.....++|++.-.+.+|.||| +|.
T Consensus 5 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~~~~dpyv~v~~-----~~~~~~~~~~kT~v~~~t~nP~wne---~f~ 75 (129)
T 2bwq_A 5 GQLSIKLWFDKVGHQLIVTILGAK-DLPSREDGRPRNPYVKIYF-----LPDRSDKNKRRTKTVKKTLEPKWNQ---TFI 75 (129)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCCTTSCCBCEEEEEEE-----ESSCSGGGEEECCCCSSBSSCEEEE---EEE
T ss_pred EEEEEEEEEccCCCEEEEEEEEee-CCCCCCCCCCCCCEEEEEE-----ecCCCCCcceecccccCCCCCcccc---EEE
Confidence 5555555443 456789999997 4899999999999987441 0000112345666444467788887 699
Q ss_pred hhc-CCC-CccceeEEEEeccCcccc
Q 043301 218 LRL-QNS-LRSKNMSVEFWDLDDVLV 241 (244)
Q Consensus 218 ~~~-~~~-~~~~~~~~~~~~~~~~~~ 241 (244)
|.+ .++ ..+..|.|+|||||+.++
T Consensus 76 f~~~~~~~~~~~~l~~~V~d~d~~~~ 101 (129)
T 2bwq_A 76 YSPVHRREFRERMLEITLWDQARVRE 101 (129)
T ss_dssp ECSCCGGGGGGCEEEEEEEEC-----
T ss_pred EccCCHHHhcCCeEEEEEEECCcCcC
Confidence 995 433 367899999999999874
No 27
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=98.81 E-value=4.2e-10 Score=88.10 Aligned_cols=75 Identities=13% Similarity=0.159 Sum_probs=55.7
Q ss_pred CcceeeecccccccccCCCCcchhhHHHHhhhhcccccccc-cCCCCceeEeecCCCCChhhhhhhhhhcCCCCccceeE
Q 043301 152 PEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSE-TGDQGSKVTISESYPYSDDTLAQFILRLQNSLRSKNMS 230 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (244)
.|.++|-+|. +|.++|.+|.+|||+++. +.+ ...++|++.-.+++|.||| +|.|.+.+.+ .|.
T Consensus 6 ~L~V~v~~a~-~L~~~d~~g~sDpyv~v~---------~~~~~~~~kT~v~~~t~nP~wne---~f~f~v~~~~---~l~ 69 (132)
T 3pyc_A 6 KIRLTVLCAK-NLAKKDFFRLPDPFAKIV---------VDGSGQCHSTDTVKNTLDPKWNQ---HYDLYVGKTD---SIT 69 (132)
T ss_dssp EEEEEEEEEE-SCCCCSTTCCCCEEEEEE---------ETTTCCEEECCCCSSCSSCEEEE---EEEEEEETTC---CEE
T ss_pred EEEEEEEEeE-CCCCCCCCCCcCeEEEEE---------ECCCCceEECCccCCCCCCCccC---EEEEEeCCCC---EEE
Confidence 3558899997 589999999999998743 322 2345566343467788887 6999887654 399
Q ss_pred EEEeccCccccc
Q 043301 231 VEFWDLDDVLVN 242 (244)
Q Consensus 231 ~~~~~~~~~~~~ 242 (244)
|+|||||..++|
T Consensus 70 ~~v~d~d~~~~~ 81 (132)
T 3pyc_A 70 ISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEGGGTTSS
T ss_pred EEEEECCCCCCC
Confidence 999999998753
No 28
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=98.70 E-value=4.4e-10 Score=88.66 Aligned_cols=75 Identities=8% Similarity=0.104 Sum_probs=52.8
Q ss_pred CcceeeecccccccccCCCCc-----------chhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhc
Q 043301 152 PEDLTFHDVFSSFTEKDRNQL-----------DDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRL 220 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~~~~n~l-----------~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 220 (244)
.|.++|.+|. +|.++|.+|. +|||+++. +......+|+..-.+.+|.||| +|.|.+
T Consensus 7 ~L~v~v~~a~-~L~~~d~~~~~~~g~~~~~~~~DPyv~v~---------l~~~~~~~T~~~~~t~nP~WnE---~f~f~v 73 (136)
T 1gmi_A 7 LLKIKICEAV-SLKPTAWSLRDAVGPRPQTFLLDPYIALN---------VDDSRIGQTATKQKTNSPAWHD---EFVTDV 73 (136)
T ss_dssp EEEEEEEEEE-SCCCCHHHHCC-CCSSCCCCCCCEEEEEE---------ETTEEEEECCCCSSCSSCEEEE---EEEEEE
T ss_pred EEEEEEEeCc-CCCCcccccccccccccCCcCcCcEEEEE---------ECCeEeeeeeEECCCcCCccCC---EEEEEe
Confidence 4568899997 4889986544 99998854 2222112333223366788887 699998
Q ss_pred CCCCccceeEEEEeccCccccc
Q 043301 221 QNSLRSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~ 242 (244)
... +.|.|+|||||+.+++
T Consensus 74 ~~~---~~L~~~V~d~d~~~~d 92 (136)
T 1gmi_A 74 CNG---RKIELAVFHDAPIGYD 92 (136)
T ss_dssp EEE---CEEEEEEEECCSSSSC
T ss_pred cCC---CEEEEEEEeCCCCCCC
Confidence 654 8899999999987765
No 29
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=98.70 E-value=2e-09 Score=86.18 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=50.8
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhccccccccc-----CCCCceeEeecCCCCChhhhhhhhhhcCCCCccc
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET-----GDQGSKVTISESYPYSDDTLAQFILRLQNSLRSK 227 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (244)
|.++|-+|. +|.++|.+|.+|||+++. +.+. ..++|++.-.+.+|.||| +|.|.+.+. +.
T Consensus 22 L~V~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~~~~~~~~~kT~v~~~t~nP~wne---~f~f~v~~~--~~ 86 (153)
T 3b7y_A 22 VRVRVIAGI-GLAKKDILGASDPYVRVT---------LYDPMNGVLTSVQTKTIKKSLNPKWNE---EILFRVHPQ--QH 86 (153)
T ss_dssp EEEEEEEEE-SCC-------CCEEEEEE---------EEETTTEEEEEEECCCCSSCSSCCCCE---EEEEEECTT--TC
T ss_pred EEEEEEEee-CCCCCCCCCCCCcEEEEE---------EECCCCccceeeeCccccCCCCCCCCC---EEEEEecCC--CC
Confidence 448899997 489999999999998744 3221 345666444577888987 699998764 57
Q ss_pred eeEEEEeccCccccc
Q 043301 228 NMSVEFWDLDDVLVN 242 (244)
Q Consensus 228 ~~~~~~~~~~~~~~~ 242 (244)
.|.|+|||||+.+++
T Consensus 87 ~l~~~V~d~d~~~~d 101 (153)
T 3b7y_A 87 RLLFEVFDENRLTRD 101 (153)
T ss_dssp EEEEEEEECCSSSCC
T ss_pred EEEEEEEECCCCcCC
Confidence 899999999998765
No 30
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=98.70 E-value=2e-09 Score=84.30 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=56.2
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhcCCCCccceeEEE
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRLQNSLRSKNMSVE 232 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (244)
+.++|-+|. +|.++|.+|.+|||+++. +.++ +++|++.-.+.+|.||| +|.|.+.. .+..|.|+
T Consensus 15 L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~-~~kT~~~~~t~nP~wne---~f~f~~~~--~~~~l~i~ 78 (133)
T 2ep6_A 15 LQVKVLKAA-DLLAADFSGKSDPFCLLE---------LGND-RLQTHTVYKNLNPEWNK---VFTFPIKD--IHDVLEVT 78 (133)
T ss_dssp EEEEEEEEE-SCCCSSSSSCCCEEEEEE---------ETTE-EEECCCCSSCSSCCCCE---EEEEEESC--TTCEEEEE
T ss_pred EEEEEEeeE-CCCCCCCCCCcCeEEEEE---------ECCE-EEEeeeecCCCCCcccc---EEEEEecC--CCCEEEEE
Confidence 448899997 489999999999998744 2222 34666444577888987 69999874 45789999
Q ss_pred EeccCccccc
Q 043301 233 FWDLDDVLVN 242 (244)
Q Consensus 233 ~~~~~~~~~~ 242 (244)
|||||+.+++
T Consensus 79 V~d~d~~~~~ 88 (133)
T 2ep6_A 79 VFDEDGDKPP 88 (133)
T ss_dssp EEEEETTEEE
T ss_pred EEECCCCCCC
Confidence 9999987653
No 31
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=2.4e-09 Score=84.29 Aligned_cols=77 Identities=10% Similarity=0.068 Sum_probs=58.2
Q ss_pred CCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhcCCC--Cccce
Q 043301 151 NPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRLQNS--LRSKN 228 (244)
Q Consensus 151 ~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~ 228 (244)
+.|.++|-+|. +|.++|. |.+|||+++. +.. .+++|++.-.+.+|.||| +|.|.+... +.+..
T Consensus 7 g~L~v~v~~a~-~L~~~~~-g~~dpyv~v~---------~~~-~~~kT~v~~~t~nP~wne---~f~f~v~~~~~~~~~~ 71 (140)
T 2dmh_A 7 GMLRVIVESAS-NIPKTKF-GKPDPIVSVI---------FKD-EKKKTKKVDNELNPVWNE---ILEFDLRGIPLDFSSS 71 (140)
T ss_dssp CEEEEEEEEEE-SCCCCSS-SCCCEEEEEE---------CSS-CEEECCCCCSCSSCEEEE---EEEEECSSCCCCTTCE
T ss_pred cEEEEEEEEee-CCCCCCC-CCCCeEEEEE---------ECC-EeEEeeeecCCCCCccCc---EEEEEecccccCCCCE
Confidence 34568899997 4899998 9999998744 222 246666444456788877 799999764 46799
Q ss_pred eEEEEeccCccccc
Q 043301 229 MSVEFWDLDDVLVN 242 (244)
Q Consensus 229 ~~~~~~~~~~~~~~ 242 (244)
|.|+|||||+.+++
T Consensus 72 l~i~V~d~d~~~~~ 85 (140)
T 2dmh_A 72 LGIIVKDFETIGQN 85 (140)
T ss_dssp EEEEEEETTCSSSC
T ss_pred EEEEEEECCCCCCC
Confidence 99999999998765
No 32
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=98.67 E-value=3.7e-09 Score=92.55 Aligned_cols=90 Identities=14% Similarity=0.129 Sum_probs=66.3
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc--CCCCceeEeecCCCCChhhhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET--GDQGSKVTISESYPYSDDTLAQ 215 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~--~~~~~~~~i~~~~~~~~~~~~~ 215 (244)
|++++...- ..+.|.++|-+|. +|.++|.+|.+|||+++ .+.+. ...+|++.-.+.+|.||| +
T Consensus 6 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~~~~dpyv~v---------~~~~~~~~~~~T~~~~~~~nP~wne---~ 72 (284)
T 2r83_A 6 GKLQYSLDYDFQNNQLLVGIIQAA-ELPALDMGGTSDPYVKV---------FLLPDKKKKFETKVHRKTLNPVFNE---Q 72 (284)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-CCCCCSSSSSCCEEEEE---------EEETCTTSCEECCCCCSCSSCEEEE---E
T ss_pred eEEEEEEEEECCCCEEEEEEEEee-CCCCCCCCCCCCeEEEE---------EEEcCCCceEeCCcccCCCCCeeCc---e
Confidence 555555544 4566789999997 48999999999999874 33332 234566333466788877 7
Q ss_pred hhhhcCCCCc-cceeEEEEeccCccccc
Q 043301 216 FILRLQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
|.|.+..++. .+.|.|+|||+|+.++|
T Consensus 73 f~f~v~~~~~~~~~l~~~V~d~d~~~~~ 100 (284)
T 2r83_A 73 FTFKVPYSELAGKTLVMAVYDFDRFSKH 100 (284)
T ss_dssp EEECCCGGGCTTCEEEEEEEECCSSSCC
T ss_pred EEEEechHHhCcCEEEEEEEECCCCCCC
Confidence 9999987764 68999999999988765
No 33
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=98.66 E-value=2.5e-09 Score=83.80 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=57.4
Q ss_pred CcceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEe-ecCCCCChhhhhhhhhhcCCCCccceeE
Q 043301 152 PEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTI-SESYPYSDDTLAQFILRLQNSLRSKNMS 230 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (244)
.|.++|-+|. +|.++|.+|.+|||++++ +.++ +.+|+++. .+.+|.||| +|.|.+.. ....|.
T Consensus 11 ~L~v~v~~a~-~L~~~d~~g~~dpyv~v~---------~~~~-~~kT~~~~~~~~nP~Wne---~f~f~v~~--~~~~l~ 74 (136)
T 1wfj_A 11 TLEVVLVSAK-GLEDADFLNNMDPYVQLT---------CRTQ-DQKSNVAEGMGTTPEWNE---TFIFTVSE--GTTELK 74 (136)
T ss_dssp EEEEEEEEEE-ECSSCCSSCSSCCCEEEE---------SSSC-EEECCCCTTCCSSCEEEE---EEEEEEES--SCCEEE
T ss_pred EEEEEEEecc-CCCCcccCCCcCceEEEE---------ECCc-cceeEeccCCCCCCccCc---EEEEEECC--CCCEEE
Confidence 3558899997 589999999999998744 3322 34566343 477888887 69999885 678999
Q ss_pred EEEeccCccccc
Q 043301 231 VEFWDLDDVLVN 242 (244)
Q Consensus 231 ~~~~~~~~~~~~ 242 (244)
|+|||||+.+++
T Consensus 75 ~~V~d~~~~~~d 86 (136)
T 1wfj_A 75 AKIFDKDVGTED 86 (136)
T ss_dssp EEECCSSSCTTT
T ss_pred EEEEECCCCCCC
Confidence 999999987764
No 34
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=98.60 E-value=8.4e-09 Score=91.48 Aligned_cols=90 Identities=13% Similarity=0.163 Sum_probs=64.9
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc--CCCCceeEeecCCCCChhhhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET--GDQGSKVTISESYPYSDDTLAQ 215 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~--~~~~~~~~i~~~~~~~~~~~~~ 215 (244)
|.+++...- ..+.+.++|-+|. +|.++|.+|.+|||+++. +.+. ...+|++.-.+++|.||| +
T Consensus 7 G~l~~~l~y~~~~~~L~v~v~~a~-~L~~~d~~g~~dPyv~v~---------l~~~~~~~~kT~v~~~t~nP~wne---~ 73 (296)
T 1dqv_A 7 GRISFALRYLYGSDQLVVRILQAL-DLPAKDSNGFSDPYVKIY---------LLPDRKKKFQTKVHRKTLNPIFNE---T 73 (296)
T ss_dssp CEEEEEEECCSSSCEEEEEEEEEE-CCCCCSTTSCCCEEEEEE---------CTTSTTSCEECCCCCSCSSCEEEE---E
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeE-CCCCcCCCCCcCeEEEEE---------EEcCCCeeEeCCccCCCCCCcEee---E
Confidence 455555433 3456779999997 489999999999998743 3232 334566333467788887 7
Q ss_pred hhhhcCCCC-ccceeEEEEeccCccccc
Q 043301 216 FILRLQNSL-RSKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (244)
|.|.+...+ .++.|.|+|||||+.+++
T Consensus 74 f~f~v~~~~l~~~~L~~~V~d~d~~~~~ 101 (296)
T 1dqv_A 74 FQFSVPLAELAQRKLHFSVYDFDRFSRH 101 (296)
T ss_dssp EEEECCGGGGSSCCCEEEEEECCSSSCC
T ss_pred EEEEecHHHhcCCEEEEEEEEcCCCCCC
Confidence 999987665 357999999999998765
No 35
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=98.59 E-value=7.2e-09 Score=100.27 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=56.6
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhcCCCCccceeEEE
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRLQNSLRSKNMSVE 232 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (244)
|.+.|-+|.+ |.+ |.+|.+|||++++ |..+ +.+|+++-.++||.||| +|.|.+.....++.|.||
T Consensus 396 L~V~V~~A~~-L~~-D~~g~sDPYV~v~---------l~~~-~~kTkvik~tlNP~Wne---~f~f~~~~~~~~~~L~~~ 460 (540)
T 3nsj_A 396 LVVSNFRAEH-LWG-DYTTATDAYLKVF---------FGGQ-EFRTGVVWNNNNPRWTD---KMDFENVLLSTGGPLRVQ 460 (540)
T ss_dssp EEEEEEEEES-CCC-SSCSCCCEEEEEE---------ETTE-EEECCCBCSCSSCBCCC---CEEEEEEETTTCCCEEEE
T ss_pred EEEEEEEccC-CCc-ccCCCcCeEEEEE---------ECCE-eeeeeeecCCCCCCCCe---EEEEEEecCCCCCEEEEE
Confidence 3488899975 777 9999999998855 2222 36777444577888887 698886554568899999
Q ss_pred EeccCccccc
Q 043301 233 FWDLDDVLVN 242 (244)
Q Consensus 233 ~~~~~~~~~~ 242 (244)
|||||+.++|
T Consensus 461 V~D~D~~~~d 470 (540)
T 3nsj_A 461 VWDADYGWDD 470 (540)
T ss_dssp EEECCSSSCC
T ss_pred EEECCCCCCC
Confidence 9999998764
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=98.57 E-value=1e-08 Score=90.88 Aligned_cols=80 Identities=11% Similarity=0.112 Sum_probs=61.8
Q ss_pred cCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhhhhhhhhcCCCCc
Q 043301 150 RNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTLAQFILRLQNSLR 225 (244)
Q Consensus 150 ~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 225 (244)
.+.+.+.|-+|. +|.+||.+|.+|||+++. |.+. .+++|++.-.+.+|.||| +|.|.+...+.
T Consensus 151 ~~~l~v~v~~a~-~L~~~d~~g~~Dpyv~v~---------l~~~~~~~~~~kT~v~~~t~nP~wne---~f~f~v~~~~l 217 (296)
T 1dqv_A 151 AGLLTVTIIKAS-NLKAMDLTGFSDPYVKAS---------LISEGRRLKKRKTSIKKNTLNPTYNE---ALVFDVAPESV 217 (296)
T ss_dssp TTEEEEEEEEEE-SCCCCSSSSCCCEEEEEC---------CCTTCCTTSCEECCCCCSCSSCEEEE---CCCCCCCSGGG
T ss_pred cceeEEEEEEee-cCCccCCCCCCCcEEEEE---------EEeCCcCccceecceecCCCCCeECc---eEEEEcCHHHc
Confidence 566889999997 589999999999998743 3322 344566444577888887 69999988764
Q ss_pred -cceeEEEEeccCccccc
Q 043301 226 -SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 226 -~~~~~~~~~~~~~~~~~ 242 (244)
++.|.|+|||||+.++|
T Consensus 218 ~~~~L~i~V~d~d~~~~~ 235 (296)
T 1dqv_A 218 ENVGLSIAVVDYDCIGHN 235 (296)
T ss_dssp GSCCCCCEEEECCSSSCC
T ss_pred cCcEEEEEEEeCCCCCCC
Confidence 56899999999998765
No 37
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=98.56 E-value=1.1e-08 Score=89.48 Aligned_cols=90 Identities=14% Similarity=0.181 Sum_probs=64.9
Q ss_pred CCcEEEEEe--ccCCcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc----CCCCceeEeecCCCCChhhh
Q 043301 140 QDVELRTIQ--ERNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET----GDQGSKVTISESYPYSDDTL 213 (244)
Q Consensus 140 ~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~----~~~~~~~~i~~~~~~~~~~~ 213 (244)
|.+.+.... ..+.+.+.|-+|. +|.++|.+|.+|||+++. +.+. .+++|++.-.+.+|.|||
T Consensus 137 G~i~l~l~~~p~~~~l~v~v~~a~-~L~~~d~~~~~dpyv~v~---------~~~~~~~~~~~kT~v~~~t~nP~wne-- 204 (284)
T 2r83_A 137 GDICFSLRYVPTAGKLTVVILEAK-NLKKMDVGGLSDPYVKIH---------LMQNGKRLKKKKTTIKKNTLNPYYNE-- 204 (284)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------EEETTEEEEEEECCCCCSCSSCEEEE--
T ss_pred ccEEEEEEecCcCCceEEEEEEeE-CCCCcCCCCCcCeEEEEE---------EEeCCcEeeeeccceecCCCCCEEce--
Confidence 444444333 3556789999997 589999999999998844 2221 234566344467888887
Q ss_pred hhhhhhcCCCCc-cceeEEEEeccCccccc
Q 043301 214 AQFILRLQNSLR-SKNMSVEFWDLDDVLVN 242 (244)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (244)
+|.|.+...+. ++.|.|+|||||+.++|
T Consensus 205 -~f~f~v~~~~l~~~~l~i~V~d~d~~~~~ 233 (284)
T 2r83_A 205 -SFSFEVPFEQIQKVQVVVTVLDYDKIGKN 233 (284)
T ss_dssp -EEEEECCTTTGGGEEEEEEEEECCSSSCC
T ss_pred -eEEEeCCHHHhCceEEEEEEEeCCCCCCC
Confidence 69999987765 56899999999997765
No 38
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=98.56 E-value=2.9e-09 Score=82.22 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=54.4
Q ss_pred Ccceeeeccccccccc---CCCCcchhhHHHHhhhhcccccccc--cCCCCceeEeecCCCCChhhhhhhhhhcCCCCcc
Q 043301 152 PEDLTFHDVFSSFTEK---DRNQLDDITENIESEIAGIKKTLSE--TGDQGSKVTISESYPYSDDTLAQFILRLQNSLRS 226 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~~---~~n~l~d~~~~~~~~~~~~~~~l~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 226 (244)
.|.++|-+|.+ |.+| |.+|.+|||+++. +.+ ...++|++.-.+.+|.||| +|.|.+... ..
T Consensus 4 ~L~v~v~~a~~-L~~~~~~d~~g~~dpyv~v~---------~~~~~~~~~kT~v~~~t~nP~wne---~f~f~v~~~-~~ 69 (126)
T 1rlw_A 4 KFTVVVLRATK-VTKGAFGDMLDTPDPYVELF---------ISTTPDSRKRTRHFNNDINPVWNE---TFEFILDPN-QE 69 (126)
T ss_dssp EEEEEEEEEES-CCSCHHHHHHCCCCEEEEEE---------CTTSTTCCEECCCCTTCSSCEEEE---EEEEEECTT-SC
T ss_pred EEEEEEEeeeC-CCCCCccccCCCCCCEEEEE---------EccCCCceEEccccCCCCCCcccc---eEEEEecCC-CC
Confidence 45688889974 7775 6789999998744 333 2455666344467788887 799998654 36
Q ss_pred ceeEEEEeccCccc
Q 043301 227 KNMSVEFWDLDDVL 240 (244)
Q Consensus 227 ~~~~~~~~~~~~~~ 240 (244)
..|.|+|||||+.+
T Consensus 70 ~~l~i~V~d~d~~~ 83 (126)
T 1rlw_A 70 NVLEITLMDANYVM 83 (126)
T ss_dssp CEEEEEEEECCSSC
T ss_pred CEEEEEEEECCCCC
Confidence 78999999999864
No 39
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=9.5e-08 Score=70.73 Aligned_cols=61 Identities=23% Similarity=0.468 Sum_probs=51.4
Q ss_pred CCCCCCCCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCccccCccccCCcC
Q 043301 67 IDHPFHCHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELKCVLHE 129 (244)
Q Consensus 67 i~hp~H~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i~~~~~~h~~H~ 129 (244)
.+.+...|.|...++ .+++|++|++.+.|+ +|+|..|+|++|.+|+...+.. ++..+.+.+
T Consensus 11 ~~~~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~--C~~~~~e~r 75 (85)
T 2eli_A 11 TDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSL--CGMDHTEKR 75 (85)
T ss_dssp CCCTTTSCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSC--CCCCCCCCC
T ss_pred cCCCCCCcccEeeeCCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCc--CCcchhhCc
Confidence 334444899999887 899999999998874 6999999999999999988766 888888776
No 40
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=98.54 E-value=7.6e-09 Score=85.02 Aligned_cols=76 Identities=12% Similarity=0.143 Sum_probs=51.2
Q ss_pred CcceeeecccccccccCCCCcchhhHHHHhhhhccccccccc-----CCCCceeEeecCCCCChhhhhhhhhhcCCCCcc
Q 043301 152 PEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSET-----GDQGSKVTISESYPYSDDTLAQFILRLQNSLRS 226 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 226 (244)
.|.++|-+|. +|.++|.+|.+|||+++. |... ..++|++.-.+.+|.||| +|.|.+.+. +
T Consensus 9 ~L~V~v~~a~-~L~~~d~~g~~DPyv~v~---------l~~~~~~~~~~~kT~v~~~t~nP~Wne---~f~f~v~~~--~ 73 (176)
T 3m7f_B 9 VVRVKVIAGI-GLAKKDILGASDPYVRVT---------LYDPMSGILTSVQTKTIKKSLNPKWNE---EILFRVLPQ--R 73 (176)
T ss_dssp EEEEEEEEEE-SCC---CCCCCCEEEEEE---------EEETTTEEEEEEECCCCSSCSSCEEEE---EEEEEECTT--T
T ss_pred EEEEEEEEee-CCCCcCCCCCcCcEEEEE---------EECCCCCcccceeCceECCCCCCcccc---eEEEEEcCC--C
Confidence 3558899997 589999999999998743 3321 234666444477788887 699999854 4
Q ss_pred ceeEEEEeccCccccc
Q 043301 227 KNMSVEFWDLDDVLVN 242 (244)
Q Consensus 227 ~~~~~~~~~~~~~~~~ 242 (244)
..|.|+|||||+.+++
T Consensus 74 ~~L~~~V~d~d~~~~d 89 (176)
T 3m7f_B 74 HRILFEVFDENRLTRD 89 (176)
T ss_dssp CEEEEEEEECC----C
T ss_pred CEEEEEEEECCCCCCC
Confidence 7899999999998764
No 41
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=98.53 E-value=1.1e-08 Score=81.29 Aligned_cols=73 Identities=19% Similarity=0.239 Sum_probs=54.9
Q ss_pred CCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhcCCCCccceeE
Q 043301 151 NPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRLQNSLRSKNMS 230 (244)
Q Consensus 151 ~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (244)
+.+.++|-+|. +|.++|.+|.+|||+.+. +. ....+|++.-.+.+|.||| +|.|.+... +..|.
T Consensus 17 ~~L~V~v~~a~-~L~~~d~~g~~dpyv~v~---------~~-~~~~kT~~~~~t~nP~Wne---~f~f~v~~~--~~~l~ 80 (148)
T 3kwu_A 17 AKISITVVCAQ-GLQAKDKTGSSDPYVTVQ---------VG-KTKKRTKTIYGNLNPVWEE---NFHFECHNS--SDRIK 80 (148)
T ss_dssp EEEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------ET-TEEEECCCCCSCSSCEEEE---EEEEEECST--TCEEE
T ss_pred cEEEEEEEeee-CCCCCCCCCCcCeEEEEE---------EC-CEEEECCccCCCCCCCccc---EEEEEecCC--CCEEE
Confidence 34558999997 589999999999998755 22 1234566334467788887 699988765 37899
Q ss_pred EEEeccCcc
Q 043301 231 VEFWDLDDV 239 (244)
Q Consensus 231 ~~~~~~~~~ 239 (244)
|+|||||..
T Consensus 81 ~~v~d~d~~ 89 (148)
T 3kwu_A 81 VRVLDEDDD 89 (148)
T ss_dssp EEEEECCCS
T ss_pred EEEEECCCC
Confidence 999999985
No 42
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=98.47 E-value=1.5e-08 Score=83.85 Aligned_cols=74 Identities=5% Similarity=0.064 Sum_probs=52.1
Q ss_pred CCcceeeeccccccc-ccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhcCCCCcccee
Q 043301 151 NPEDLTFHDVFSSFT-EKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRLQNSLRSKNM 229 (244)
Q Consensus 151 ~~~~~~v~~~~~~~~-~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (244)
..|.++|-+|.+ |. +++..+ +|||+++. +.. ..++|++.-.+++|.||| +|.|.+.+ +..|
T Consensus 36 ~~L~V~V~~A~~-L~~~~~~~~-sDPYv~v~---------~~~-~~~kT~v~~~tlnP~Wne---~f~f~v~~---~~~L 97 (173)
T 2nq3_A 36 SQLQITVISAKL-KENKKNWFG-PSPYVEVT---------VDG-QSKKTEKCNNTNSPKWKQ---PLTVIVTP---VSKL 97 (173)
T ss_dssp EEEEEEEEEEEE-CCCC--CCC-CCEEEEEE---------ETT-EEEECCCCSSCSSCEEEE---EEEEEECT---TCEE
T ss_pred eEEEEEEEEeEC-CCCcccCCC-CCeEEEEE---------ECC-EEeEccccCCCCCCeECC---EEEEEeCC---CCEE
Confidence 346689999975 66 555555 99998754 222 345566444467788887 69998853 8899
Q ss_pred EEEEeccCccccc
Q 043301 230 SVEFWDLDDVLVN 242 (244)
Q Consensus 230 ~~~~~~~~~~~~~ 242 (244)
.|+|||||+.+++
T Consensus 98 ~~~V~D~d~~~~d 110 (173)
T 2nq3_A 98 HFRVWSHQTLKSD 110 (173)
T ss_dssp EEEEEECCSSSCC
T ss_pred EEEEEECCCCCCC
Confidence 9999999987665
No 43
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.46 E-value=1.3e-08 Score=80.40 Aligned_cols=68 Identities=10% Similarity=0.151 Sum_probs=47.2
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEe-ecCCCCChhhhhhhhhhcCCCCccceeEE
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTI-SESYPYSDDTLAQFILRLQNSLRSKNMSV 231 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (244)
|.++|.+|. ++ + .+|.+|||++++ ..+.+|+++. .+.||.||| +|.|.+.. .+..|.|
T Consensus 7 L~V~V~~A~-~l-~--~~g~~DPYv~v~------------~~~~kt~~~~~~t~nP~WnE---~f~f~v~~--~~~~L~~ 65 (131)
T 2cjt_A 7 LCVGVKKAK-FD-G--AQEKFNTYVTLK------------VQNVKSTTIAVRGSQPSWEQ---DFMFEINR--LDLGLTV 65 (131)
T ss_dssp EEEEEEEEE-CS-S--CGGGCEEEEEEE------------ETTEEEECCCEESSSCEEEE---EEEEEECC--CSSEEEE
T ss_pred EEEEEEEeE-CC-C--CCCCcCeEEEEE------------ecCEEEeEecCCCCCceECC---EEEEEEeC--CCCeEEE
Confidence 457888886 34 2 388999998865 1122333222 367888887 69999875 4557999
Q ss_pred EEeccCccccc
Q 043301 232 EFWDLDDVLVN 242 (244)
Q Consensus 232 ~~~~~~~~~~~ 242 (244)
+||||| .++|
T Consensus 66 ~V~D~d-~~~d 75 (131)
T 2cjt_A 66 EVWNKG-LIWD 75 (131)
T ss_dssp EEEECC-SSCE
T ss_pred EEEECC-CCCC
Confidence 999999 6654
No 44
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.29 E-value=7.1e-08 Score=79.58 Aligned_cols=68 Identities=10% Similarity=0.152 Sum_probs=47.2
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEe-ecCCCCChhhhhhhhhhcCCCCccceeEE
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTI-SESYPYSDDTLAQFILRLQNSLRSKNMSV 231 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (244)
|.++|.+|. ++ + .+|.+|||++++ ..+++|+++. .+.||.||| +|.|.+.. .+..|.|
T Consensus 16 L~V~V~~A~-~l-~--~~g~~DPYV~v~------------~~~~kt~~~~~~t~nP~WnE---~f~f~v~~--~~~~L~~ 74 (167)
T 2cjs_A 16 LCVGVKKAK-FD-G--AQEKFNTYVTLK------------VQNVESTTIAVRGSQPSWEQ---DFMFEINR--LDLGLTV 74 (167)
T ss_dssp EEEEEEEEE-CS-S--CGGGCEEEEEEE------------ETTEEEECCCEESSSCEEEE---EEEEECCC--TTSEEEE
T ss_pred EEEEEEEEE-CC-C--CCCCCCeEEEEE------------ecceEEEEecCCCCCCCCCC---EEEEEeeC--CCCEEEE
Confidence 447888886 34 3 478999998865 1123344232 367888887 69999874 4567999
Q ss_pred EEeccCccccc
Q 043301 232 EFWDLDDVLVN 242 (244)
Q Consensus 232 ~~~~~~~~~~~ 242 (244)
+||||| .+++
T Consensus 75 ~V~D~d-~~~d 84 (167)
T 2cjs_A 75 EVWNKG-LIWD 84 (167)
T ss_dssp EEEECC-SSCC
T ss_pred EEEECC-CCCC
Confidence 999999 6554
No 45
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=98.19 E-value=1.7e-07 Score=88.44 Aligned_cols=76 Identities=7% Similarity=0.031 Sum_probs=56.5
Q ss_pred CcceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeecCCCCChhhhhhhhhhcCCCCccceeEE
Q 043301 152 PEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISESYPYSDDTLAQFILRLQNSLRSKNMSV 231 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (244)
.+.++|-+|. +|.++|.+|.+|||+++. +.+ ...+|++.-.+.||.||| +|.|.+... ....|.|
T Consensus 388 ~l~v~v~~a~-~L~~~d~~~~sdpyv~v~---------~~~-~~~~T~~~~~t~nP~w~e---~f~f~~~~~-~~~~l~~ 452 (510)
T 3jzy_A 388 RLMVHVIEAT-ELKACKPNGKSNPYCEIS---------MGS-QSYTTRTIQDTLNPKWNF---NCQFFIKDL-YQDVLCL 452 (510)
T ss_dssp EEEEEEEEEE-SCCCCSTTSCCCEEEEEE---------ETT-EEEECCCCSSCSSCEEEE---EEEEEESCT-TTCEEEE
T ss_pred eEEEEeceee-cCCCCCCCCCCCeEEEEE---------ECC-eeccCCccCCCCCCccCc---eEEEEecCC-CCCEEEE
Confidence 4568999997 589999999999998754 222 245566434467788887 699988543 4467999
Q ss_pred EEeccCccccc
Q 043301 232 EFWDLDDVLVN 242 (244)
Q Consensus 232 ~~~~~~~~~~~ 242 (244)
+|||||+.+++
T Consensus 453 ~v~d~d~~~~~ 463 (510)
T 3jzy_A 453 TLFDRDQFSPD 463 (510)
T ss_dssp EEEECCSSSSC
T ss_pred EEEeCCCCCCC
Confidence 99999998764
No 46
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=98.08 E-value=3.3e-06 Score=59.13 Aligned_cols=49 Identities=18% Similarity=0.459 Sum_probs=41.9
Q ss_pred CCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCccccCcc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKEL 123 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i~~~~~ 123 (244)
.|.|...++ .+++|++|++.+.|+ +|+|..|+|++|.+|+...+.. +++
T Consensus 12 ~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~--C~~ 64 (65)
T 2enz_A 12 PHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANL--CGI 64 (65)
T ss_dssp CCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSCSC--TTT
T ss_pred CCccEeEcCCCCcCchhcChhheecCCcccccCCCCCccCHhHHhhCcCc--CCC
Confidence 788888777 899999999998874 6999999999999999887654 554
No 47
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=97.95 E-value=8.6e-07 Score=84.34 Aligned_cols=69 Identities=9% Similarity=0.074 Sum_probs=7.6
Q ss_pred cCCcceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEeec---CCCCChhhhhhhhhhcCCCCcc
Q 043301 150 RNPEDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTISE---SYPYSDDTLAQFILRLQNSLRS 226 (244)
Q Consensus 150 ~~~~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~ 226 (244)
.+.|.++|-+|.+ |.+|| |||+++. ++.....+|++...+ +||.||| +|.|.+.+. .
T Consensus 10 ~~~L~V~VieAk~-L~~~d-----dpYv~v~---------l~~~~~~kT~v~~kt~~glnP~WnE---~F~f~~~~~--~ 69 (483)
T 3bxj_A 10 DNVLKLWIIEARE-LPPKK-----RYYCELC---------LDDMLYARTTSKPRSASGDTVFWGE---HFEFNNLPA--V 69 (483)
T ss_dssp EECC------------------------------------------------------------C---CEECC-------
T ss_pred ccEEEEEEEEcCC-cCCCC-----CCeEEEE---------ECCeEEeeeeEEeCCCCCCCCcccc---EEEEecCCC--c
Confidence 3568899999984 88887 9998854 333323456644445 7888988 699997665 3
Q ss_pred ceeEEEEec-cCc
Q 043301 227 KNMSVEFWD-LDD 238 (244)
Q Consensus 227 ~~~~~~~~~-~~~ 238 (244)
..|.|+||| ||+
T Consensus 70 ~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 70 RALRLHLYRDSDK 82 (483)
T ss_dssp -------------
T ss_pred cEEEEEEEecCCc
Confidence 899999999 884
No 48
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=97.92 E-value=6.1e-06 Score=54.46 Aligned_cols=44 Identities=23% Similarity=0.524 Sum_probs=36.8
Q ss_pred CcceEeec-CcccccccccCCCC---eeEEcCCccceeccccccCcCc
Q 043301 74 HPLTLSKT-NHHRCDACLDECSG---MAYRCHECCYNLHYHCTALKPS 117 (244)
Q Consensus 74 H~L~L~~~-~~~~Cd~Cg~~~~g---~~Y~C~~Cd~~lH~~Ca~~p~~ 117 (244)
|.|...++ .+++|+.|++.+.| .+|+|..|++++|.+|+...|.
T Consensus 1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~ 48 (50)
T 1ptq_A 1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVAN 48 (50)
T ss_dssp CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCS
T ss_pred CCCEeecCCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhcCC
Confidence 55666655 78999999999877 4699999999999999987653
No 49
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=97.92 E-value=7.4e-06 Score=56.43 Aligned_cols=47 Identities=26% Similarity=0.440 Sum_probs=40.4
Q ss_pred CCCCcceE-eec-CcccccccccCCCCeeEEcCCccceeccccccCcCc
Q 043301 71 FHCHPLTL-SKT-NHHRCDACLDECSGMAYRCHECCYNLHYHCTALKPS 117 (244)
Q Consensus 71 ~H~H~L~L-~~~-~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p~~ 117 (244)
..+|.|.. .++ .+++|+.||+.+...+|+|..|+|+.|.+|....+.
T Consensus 8 ~~~H~F~~~~~~~~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~v~~ 56 (59)
T 1rfh_A 8 GEGHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSLIQL 56 (59)
T ss_dssp CSSCCCEECCCSSCCEECTTTCSEECSCCEECTTTSCEECHHHHTTCCC
T ss_pred CCCCcCeeeeccCCCeEchhcchhhhhCccEeCCCCCeEehhhhhhCcC
Confidence 34788888 666 899999999988666899999999999999987754
No 50
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.91 E-value=1.2e-06 Score=85.92 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=56.0
Q ss_pred CcceeeecccccccccC--CCCcchhhHHHHhhhhcccccccccCCCCceeEee-c-CCCCChhhhhhhhhhcCCCCccc
Q 043301 152 PEDLTFHDVFSSFTEKD--RNQLDDITENIESEIAGIKKTLSETGDQGSKVTIS-E-SYPYSDDTLAQFILRLQNSLRSK 227 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~~~--~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~-~-~~~~~~~~~~~~~~~~~~~~~~~ 227 (244)
.|.++|-+|.+ |.++| .+|.+|||++++ +.+.. ....+++|+ +|. + .||.||| +|.|.+...+. .
T Consensus 498 ~L~V~Vi~A~~-L~~~d~~~~~~~DPYV~V~--l~g~~---~d~~~~kTk-vi~~ng~NP~WnE---~f~F~v~~~el-~ 566 (624)
T 1djx_A 498 RLRVRIISGQQ-LPKVNKNKNSIVDPKVIVE--IHGVG---RDTGSRQTA-VITNNGFNPRWDM---EFEFEVTVPDL-A 566 (624)
T ss_dssp EEEEEEEEEES-CCCCSSCSSSCCCEEEEEE--EESSG---GGCEEEECC-CCTTCSSSCEEEE---EEEEEESCGGG-C
T ss_pred EEEEEEEEcCC-CCcccccccCCCCcEEEEE--EecCC---CCcceeecc-cccCCCCCCccCc---eEEEEEecCCC-C
Confidence 35588999974 78888 589999998854 11100 011345677 444 4 6888887 69998875544 5
Q ss_pred eeEEEEeccCccccc
Q 043301 228 NMSVEFWDLDDVLVN 242 (244)
Q Consensus 228 ~~~~~~~~~~~~~~~ 242 (244)
-|.|+|||||+.++|
T Consensus 567 ~L~~~V~D~D~~~~d 581 (624)
T 1djx_A 567 LVRFMVEDYDSSSKN 581 (624)
T ss_dssp EEEEEEEECCSSSCC
T ss_pred EEEEEEEEcCCCCCC
Confidence 799999999998765
No 51
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=97.90 E-value=7.6e-07 Score=89.10 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=56.3
Q ss_pred Ccceeeecccccccc---cCCCCcchhhHHHHhhhhcccccccc--cCCCCceeEeecCCCCChhhhhhhhhhcCCCCcc
Q 043301 152 PEDLTFHDVFSSFTE---KDRNQLDDITENIESEIAGIKKTLSE--TGDQGSKVTISESYPYSDDTLAQFILRLQNSLRS 226 (244)
Q Consensus 152 ~~~~~v~~~~~~~~~---~~~n~l~d~~~~~~~~~~~~~~~l~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 226 (244)
.|.++|-+|.+ |.+ +|.+|.+|||+++. +.+ ..+++|+++-.+.+|.||| +|.|.+... ..
T Consensus 19 ~L~V~Vi~A~n-L~~~~~~D~~g~sDPYV~V~---------l~~~~~~k~kTkvik~tlNPvWNE---tF~F~v~~~-~~ 84 (749)
T 1cjy_A 19 KFTVVVLRATK-VTKGAFGDMLDTPDPYVELF---------ISTTPDSRKRTRHFNNDINPVWNE---TFEFILDPN-QE 84 (749)
T ss_dssp EEEEEEEEEEC-CCSCHHHHHHCCCCEEEEEE---------CTTSTTCCEECCCCTTCSSCEEEE---EEEEEECTT-SC
T ss_pred EEEEEEEEEEC-CCCccccCCCCCcCeEEEEE---------EecCCCCeEecceEcCCCCCeeee---EEEEEecCC-CC
Confidence 34588899974 777 99999999998854 332 2456677444477788877 799998764 45
Q ss_pred ceeEEEEeccCccc
Q 043301 227 KNMSVEFWDLDDVL 240 (244)
Q Consensus 227 ~~~~~~~~~~~~~~ 240 (244)
..|.|+|||||+.+
T Consensus 85 ~~L~~~V~D~D~~~ 98 (749)
T 1cjy_A 85 NVLEITLMDANYVM 98 (749)
T ss_dssp CBCEEEEEECCSSS
T ss_pred CEEEEEEEECCCCC
Confidence 68999999999876
No 52
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=97.88 E-value=1.2e-05 Score=53.49 Aligned_cols=44 Identities=20% Similarity=0.533 Sum_probs=37.2
Q ss_pred CCcceEeecCcccccccccCCCCeeEEcCCccceeccccccCcCc
Q 043301 73 CHPLTLSKTNHHRCDACLDECSGMAYRCHECCYNLHYHCTALKPS 117 (244)
Q Consensus 73 ~H~L~L~~~~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p~~ 117 (244)
+|.|+..++..++|+.|++.+. ++|+|.+|+|+.|.+|+..+|+
T Consensus 4 ~HrF~~~t~~~t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~vp~ 47 (49)
T 1kbe_A 4 THRFSTKSWLSQVCNVCQKSMI-FGVKCKHCRLKCHNKCTKEAPA 47 (49)
T ss_dssp CCCEEEECCSSCCCSSSCCSSC-CEEEETTTTEEESSSCTTTSCC
T ss_pred CcccCccCCCCcCccccCceeE-CcCCCCCCCCccchhhcCcCCC
Confidence 5888887775599999999875 4699999999999999987653
No 53
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=97.86 E-value=1.4e-05 Score=57.27 Aligned_cols=46 Identities=26% Similarity=0.487 Sum_probs=40.0
Q ss_pred CCCcceE-eec-CcccccccccCCCCeeEEcCCccceeccccccCcCc
Q 043301 72 HCHPLTL-SKT-NHHRCDACLDECSGMAYRCHECCYNLHYHCTALKPS 117 (244)
Q Consensus 72 H~H~L~L-~~~-~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p~~ 117 (244)
.+|.|.. .++ .+++|+.|+..+...+|+|..|+|++|.+|....+.
T Consensus 22 ~~H~F~~~~~~~~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~V~~ 69 (72)
T 2fnf_X 22 EGHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSLIQL 69 (72)
T ss_dssp SSCCCEECCCCSSCCBCTTTSSBCSSCCEECTTSSCEECTGGGGGCCS
T ss_pred CCCccceeecCCCCcchhhhhHHHHhCcCccCCCCCeechhhhccCcC
Confidence 4788888 666 899999999988666899999999999999988754
No 54
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.83 E-value=3.3e-06 Score=62.47 Aligned_cols=41 Identities=24% Similarity=0.408 Sum_probs=34.8
Q ss_pred CCCEeeeeccCCCcccccccccccCCCCC-----cEEeCCCCCcccccccc
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSLQGP-----AYGCGTCEFSIHKSCAE 62 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i~g~-----~Y~C~~C~F~lH~~Ca~ 62 (244)
|.|.. .. ...+++|+.|+..|||+ +|+|..|+|.+|++|..
T Consensus 25 H~F~~-~~----~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 25 HEFIP-TL----YHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp EEEEE-EC----CSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred cceEe-Ec----CCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 66655 22 46789999999999984 89999999999999997
No 55
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.83 E-value=5.7e-06 Score=61.18 Aligned_cols=50 Identities=18% Similarity=0.270 Sum_probs=41.6
Q ss_pred CCcceEeec-CcccccccccCCCCe-----eEEcCCccceecccccc---CcCccccCccc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGM-----AYRCHECCYNLHYHCTA---LKPSINFKELK 124 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~-----~Y~C~~Cd~~lH~~Ca~---~p~~i~~~~~~ 124 (244)
.|.|....+ .+++|++|++.+.|+ +|+|..|.|++|.+|.. ..+.. |+++
T Consensus 24 ~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~--C~~~ 82 (84)
T 2row_A 24 GHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAP--CKVY 82 (84)
T ss_dssp TEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCC--CSTT
T ss_pred CcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccc--cCcC
Confidence 788888877 899999999988775 89999999999999998 45443 5554
No 56
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=97.82 E-value=1.8e-05 Score=55.33 Aligned_cols=44 Identities=25% Similarity=0.536 Sum_probs=36.8
Q ss_pred CCCCEeeeeccCCCcccccccccccCCCC---CcEEeCCCCCccccccccCC
Q 043301 16 MHYLIFNENEVGHDDVVIICDICETSLQG---PAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 16 pH~L~L~~~~~~~~~~~~~C~~C~~~i~g---~~Y~C~~C~F~lH~~Ca~~p 64 (244)
+|.++. .. ...+++|+.|+..||| .+|+|..|++.+|++|+...
T Consensus 12 ~H~F~~-~~----~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 58 (65)
T 2enz_A 12 PHRFKV-YN----YKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKV 58 (65)
T ss_dssp CCCEEE-CC----CCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTS
T ss_pred CCccEe-Ec----CCCCcCchhcChhheecCCcccccCCCCCccCHhHHhhC
Confidence 388876 22 3568999999999998 48999999999999999863
No 57
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=97.82 E-value=1.5e-05 Score=53.04 Aligned_cols=45 Identities=27% Similarity=0.650 Sum_probs=38.7
Q ss_pred CCcceEeec-CcccccccccCCCCeeEEcCCccceeccccccCcCcc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGMAYRCHECCYNLHYHCTALKPSI 118 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p~~i 118 (244)
.|.|...++ .+++|+.|++.+. .+|+|..|++++|.+|+...+..
T Consensus 3 ~H~F~~~~~~~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~v~~~ 48 (52)
T 1faq_A 3 THNFARKTFLKLAFCDICQKFLL-NGFRCQTCGYKFHEHCSTKVPTM 48 (52)
T ss_dssp CCCCEEECCSSCEECTTSSSEEC-SEEECTTTTCCBCSTTSSSSSSC
T ss_pred CceeEeEeCCCCcCCCCcccccc-cCCEeCCCCCeEChhHHhhCcCc
Confidence 577877776 8899999999876 78999999999999999877543
No 58
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.80 E-value=2.5e-05 Score=57.55 Aligned_cols=49 Identities=24% Similarity=0.520 Sum_probs=39.6
Q ss_pred eCCCCCCCEeeeeccCCCcccccccccccCCCC---CcEEeCCCCCccccccccCCC
Q 043301 12 HTSHMHYLIFNENEVGHDDVVIICDICETSLQG---PAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 12 HpsHpH~L~L~~~~~~~~~~~~~C~~C~~~i~g---~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
.+.-+|.|+. .. ...+++|+.|+..+|| .+|+|..|++.+|++|+...+
T Consensus 13 ~~~~~H~F~~-~~----~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (85)
T 2eli_A 13 DPRSKHKFKI-HT----YGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVP 64 (85)
T ss_dssp CTTTSCCCEE-EC----CSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSC
T ss_pred CCCCCcccEe-ee----CCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcC
Confidence 4444498887 22 3568999999999998 489999999999999998643
No 59
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=97.79 E-value=1.2e-05 Score=53.06 Aligned_cols=36 Identities=28% Similarity=0.624 Sum_probs=31.9
Q ss_pred CcccccccccccCCCC---CcEEeCCCCCccccccccCC
Q 043301 29 DDVVIICDICETSLQG---PAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 29 ~~~~~~C~~C~~~i~g---~~Y~C~~C~F~lH~~Ca~~p 64 (244)
...+++|+.|+..||| .+|+|+.|++.+|++|+...
T Consensus 8 ~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 46 (50)
T 1ptq_A 8 YMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKV 46 (50)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTS
T ss_pred CCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhc
Confidence 3568999999999998 48999999999999998754
No 60
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=97.79 E-value=8e-06 Score=57.08 Aligned_cols=46 Identities=22% Similarity=0.550 Sum_probs=39.9
Q ss_pred CCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCcc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSI 118 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i 118 (244)
.|.|....+ .+++|++|++.+.|+ +|+|..|+|++|.+|+...+..
T Consensus 9 ~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~ 58 (65)
T 3uej_A 9 SHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANL 58 (65)
T ss_dssp ECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSE
T ss_pred CceEEeEeCCCCCcccccChhhhccCceeeECCCCCCeEchhHhhhCCCc
Confidence 688888776 899999999998774 6999999999999999887654
No 61
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=97.76 E-value=1.7e-05 Score=55.70 Aligned_cols=45 Identities=24% Similarity=0.455 Sum_probs=39.7
Q ss_pred CCcceEeec-CcccccccccCCCC---eeEEcCCccceeccccccCcCc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSG---MAYRCHECCYNLHYHCTALKPS 117 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g---~~Y~C~~Cd~~lH~~Ca~~p~~ 117 (244)
.|.|...++ .+++|++|++.+.| ..|+|..|+|++|.+|+...+.
T Consensus 13 ~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~ 61 (66)
T 1y8f_A 13 QHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNA 61 (66)
T ss_dssp CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSCC
T ss_pred CcccEeeeCCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCcC
Confidence 788888877 89999999999887 4699999999999999987654
No 62
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.75 E-value=2.2e-05 Score=56.33 Aligned_cols=46 Identities=24% Similarity=0.398 Sum_probs=40.6
Q ss_pred CCCCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcC
Q 043301 71 FHCHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKP 116 (244)
Q Consensus 71 ~H~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~ 116 (244)
...|.|...++ .+++|++|++.+.|+ +|+|..|+|++|.+|+...+
T Consensus 15 ~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (74)
T 2db6_A 15 DKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVE 64 (74)
T ss_dssp SSBCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGS
T ss_pred CCCCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHhhCC
Confidence 34899999888 899999999998874 79999999999999998764
No 63
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=97.73 E-value=1.6e-05 Score=57.55 Aligned_cols=48 Identities=25% Similarity=0.520 Sum_probs=38.7
Q ss_pred eCCCCCCCEeeeeccCCCcccccccccccCCCCC---cEEeCCCCCccccccccCC
Q 043301 12 HTSHMHYLIFNENEVGHDDVVIICDICETSLQGP---AYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 12 HpsHpH~L~L~~~~~~~~~~~~~C~~C~~~i~g~---~Y~C~~C~F~lH~~Ca~~p 64 (244)
|....|.|.. .. ...+++|+.|+..|||+ +|+|..|+|.+|++|+...
T Consensus 19 ~~~~~H~F~~-~~----f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v 69 (77)
T 2enn_A 19 HHVKCHEFTA-TF----FPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKV 69 (77)
T ss_dssp EESSSCEEEE-EC----CSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSC
T ss_pred ccCCCCccEE-Ec----CCCCcCccccChhhccccccccCcCCCCCcCCHhHHhhC
Confidence 4444488876 22 35689999999999984 8999999999999999864
No 64
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=97.73 E-value=1.5e-05 Score=55.67 Aligned_cols=44 Identities=27% Similarity=0.540 Sum_probs=36.3
Q ss_pred CCCCEeeeeccCCCcccccccccccCCCC---CcEEeCCCCCccccccccCC
Q 043301 16 MHYLIFNENEVGHDDVVIICDICETSLQG---PAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 16 pH~L~L~~~~~~~~~~~~~C~~C~~~i~g---~~Y~C~~C~F~lH~~Ca~~p 64 (244)
+|.|+. .. ...+.+|+.|+..||| .+|+|..|+|.+|++|+...
T Consensus 9 ~H~F~~-~~----~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 55 (65)
T 3uej_A 9 SHRFKV-YN----YMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKV 55 (65)
T ss_dssp ECCEEE-EC----CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTS
T ss_pred CceEEe-Ee----CCCCCcccccChhhhccCceeeECCCCCCeEchhHhhhC
Confidence 377776 22 3568999999999998 47999999999999999864
No 65
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.71 E-value=3.2e-05 Score=56.63 Aligned_cols=48 Identities=27% Similarity=0.532 Sum_probs=38.5
Q ss_pred eCCCCCCCEeeeeccCCCcccccccccccCCCCC---cEEeCCCCCccccccccCC
Q 043301 12 HTSHMHYLIFNENEVGHDDVVIICDICETSLQGP---AYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 12 HpsHpH~L~L~~~~~~~~~~~~~C~~C~~~i~g~---~Y~C~~C~F~lH~~Ca~~p 64 (244)
|...+|.|+. .. ...+++|+.|+..|||+ +|+|..|+|.+|++|+...
T Consensus 13 ~~~~~H~F~~-~~----~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v 63 (83)
T 2yuu_A 13 HYIKNHEFIA-TF----FGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKI 63 (83)
T ss_dssp ECGGGCCEEE-EC----CSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTC
T ss_pred cccCCCceEe-Ee----CCCCcChhhcChhhccccccccccCCcCCeeChhhhhhC
Confidence 3334488876 22 35689999999999984 8999999999999999863
No 66
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.68 E-value=1.7e-05 Score=56.97 Aligned_cols=49 Identities=18% Similarity=0.322 Sum_probs=39.4
Q ss_pred eCCCCCCCEeeeeccCCCcccccccccccCCCC---CcEEeCCCCCccccccccCCC
Q 043301 12 HTSHMHYLIFNENEVGHDDVVIICDICETSLQG---PAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 12 HpsHpH~L~L~~~~~~~~~~~~~C~~C~~~i~g---~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
+...+|.|+. .. ...+++|+.|+..||| .+|+|..|++.+|++|+....
T Consensus 13 ~~~~~H~F~~-~~----f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (74)
T 2db6_A 13 VNDKPHKFKD-HF----FKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVE 64 (74)
T ss_dssp SCSSBCCEEE-EE----CSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGS
T ss_pred ccCCCCceEE-ee----CCCCcCchhcChhhccccCCccccCCCCCccChhHHhhCC
Confidence 3334499887 32 3568999999999998 489999999999999998543
No 67
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=97.65 E-value=3.1e-05 Score=55.98 Aligned_cols=46 Identities=24% Similarity=0.602 Sum_probs=40.0
Q ss_pred CCCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCc
Q 043301 72 HCHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPS 117 (244)
Q Consensus 72 H~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~ 117 (244)
..|.|...++ .+++|++|++.+.|+ .|+|..|+|++|.+|....+.
T Consensus 22 ~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~ 71 (77)
T 2enn_A 22 KCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIA 71 (77)
T ss_dssp SSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCCS
T ss_pred CCCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCcC
Confidence 3788888877 899999999988774 699999999999999987754
No 68
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=97.65 E-value=3.6e-05 Score=51.12 Aligned_cols=42 Identities=26% Similarity=0.623 Sum_probs=35.3
Q ss_pred CCCEeeeeccCCCcccccccccccCCCCCcEEeCCCCCccccccccCC
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSLQGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
|.++. .. ...+++|+.|+..+| .+|+|..|++.+|++|+...
T Consensus 4 H~F~~-~~----~~~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~v 45 (52)
T 1faq_A 4 HNFAR-KT----FLKLAFCDICQKFLL-NGFRCQTCGYKFHEHCSTKV 45 (52)
T ss_dssp CCCEE-EC----CSSCEECTTSSSEEC-SEEECTTTTCCBCSTTSSSS
T ss_pred ceeEe-Ee----CCCCcCCCCcccccc-cCCEeCCCCCeEChhHHhhC
Confidence 77765 22 356899999999999 89999999999999999854
No 69
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=5.5e-05 Score=55.38 Aligned_cols=47 Identities=21% Similarity=0.470 Sum_probs=40.6
Q ss_pred CCCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCcc
Q 043301 72 HCHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSI 118 (244)
Q Consensus 72 H~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i 118 (244)
..|.|...++ .+++|++|++.+.|+ +|+|..|.|.+|.+|....+..
T Consensus 16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v~~~ 66 (83)
T 2yuu_A 16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGR 66 (83)
T ss_dssp GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTCCSC
T ss_pred CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCeeChhhhhhCCCc
Confidence 3788888877 899999999998874 6999999999999999876543
No 70
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=97.64 E-value=4.2e-05 Score=54.78 Aligned_cols=46 Identities=24% Similarity=0.490 Sum_probs=37.4
Q ss_pred CCCCCEe-eeeccCCCcccccccccccCCCCCcEEeCCCCCccccccccCCC
Q 043301 15 HMHYLIF-NENEVGHDDVVIICDICETSLQGPAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 15 HpH~L~L-~~~~~~~~~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
.+|.|.. .. ...+++|+.|+..|...+|+|..|+|.+|++|+....
T Consensus 22 ~~H~F~~~~~-----~~~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~V~ 68 (72)
T 2fnf_X 22 EGHRFVELAL-----RGGPGWCDLCGREVLRQALRCANCKFTCHSECRSLIQ 68 (72)
T ss_dssp SSCCCEECCC-----CSSCCBCTTTSSBCSSCCEECTTSSCEECTGGGGGCC
T ss_pred CCCccceeec-----CCCCcchhhhhHHHHhCcCccCCCCCeechhhhccCc
Confidence 4487765 21 3568999999999966799999999999999998643
No 71
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=97.63 E-value=2.9e-05 Score=53.41 Aligned_cols=46 Identities=24% Similarity=0.490 Sum_probs=37.1
Q ss_pred CCCCCEe-eeeccCCCcccccccccccCCCCCcEEeCCCCCccccccccCCC
Q 043301 15 HMHYLIF-NENEVGHDDVVIICDICETSLQGPAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 15 HpH~L~L-~~~~~~~~~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
.+|.+.. .. ...+++|+.|+..|...+|+|+.|+|.+|++|+...+
T Consensus 9 ~~H~F~~~~~-----~~~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~v~ 55 (59)
T 1rfh_A 9 EGHRFVELAL-----RGGPGWCDLCGREVLRQALRCANCKFTCHSECRSLIQ 55 (59)
T ss_dssp SSCCCEECCC-----SSCCEECTTTCSEECSCCEECTTTSCEECHHHHTTCC
T ss_pred CCCcCeeeec-----cCCCeEchhcchhhhhCccEeCCCCCeEehhhhhhCc
Confidence 3477765 21 4568999999999966799999999999999998643
No 72
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=97.62 E-value=2.4e-05 Score=54.86 Aligned_cols=43 Identities=26% Similarity=0.485 Sum_probs=36.2
Q ss_pred CCCEeeeeccCCCcccccccccccCCCCC---cEEeCCCCCccccccccCC
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSLQGP---AYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i~g~---~Y~C~~C~F~lH~~Ca~~p 64 (244)
|.|+. .. ...+++|+.|+..|||+ +|+|..|+|.+|++|+...
T Consensus 14 H~F~~-~~----~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v 59 (66)
T 1y8f_A 14 HNFEV-WT----ATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLL 59 (66)
T ss_dssp CCEEE-EE----CSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHS
T ss_pred cccEe-ee----CCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhC
Confidence 88876 22 35689999999999984 7999999999999998753
No 73
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=97.29 E-value=0.00011 Score=48.85 Aligned_cols=42 Identities=19% Similarity=0.488 Sum_probs=33.6
Q ss_pred CCCEeeeeccCCCcccccccccccCCCCCcEEeCCCCCccccccccCCC
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSLQGPAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
|.+.. .. .. ..+|+.|+..|+ ++|+|.+|+|..|.+|+..++
T Consensus 5 HrF~~-~t----~~-~t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~vp 46 (49)
T 1kbe_A 5 HRFST-KS----WL-SQVCNVCQKSMI-FGVKCKHCRLKCHNKCTKEAP 46 (49)
T ss_dssp CCEEE-EC----CS-SCCCSSSCCSSC-CEEEETTTTEEESSSCTTTSC
T ss_pred cccCc-cC----CC-CcCccccCceeE-CcCCCCCCCCccchhhcCcCC
Confidence 77665 21 23 489999999998 579999999999999998543
No 74
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.17 E-value=0.0002 Score=50.00 Aligned_cols=47 Identities=19% Similarity=0.447 Sum_probs=35.6
Q ss_pred cccccccc-CCCCCcEEeCCC-CCccccccccCCCcCCCCCCCCcceEe
Q 043301 33 IICDICET-SLQGPAYGCGTC-EFSIHKSCAELPLKIDHPFHCHPLTLS 79 (244)
Q Consensus 33 ~~C~~C~~-~i~g~~Y~C~~C-~F~lH~~Ca~~p~~i~hp~H~H~L~L~ 79 (244)
..|++|+. +|.|.+|+|.+| +|+|+..|...........-.|++...
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~~~~~H~~~H~~~~~ 60 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEY 60 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCCCCSSSCTTCCEEEE
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCCcCCCCCCCCCEEEE
Confidence 78999996 599999999999 799999998765432211126877654
No 75
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.03 E-value=0.00046 Score=50.60 Aligned_cols=48 Identities=25% Similarity=0.521 Sum_probs=37.1
Q ss_pred ccccccccc-CCCCCcEEeCCC-C---CccccccccCCCcCCCCCC--CCcceEeec
Q 043301 32 VIICDICET-SLQGPAYGCGTC-E---FSIHKSCAELPLKIDHPFH--CHPLTLSKT 81 (244)
Q Consensus 32 ~~~C~~C~~-~i~g~~Y~C~~C-~---F~lH~~Ca~~p~~i~hp~H--~H~L~L~~~ 81 (244)
...||.|+. +|.|.+|+|.+| + |+|+..|....... ..| .|+|+....
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~--~~H~~~H~~~~i~~ 75 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHET--DIHKEDHQLEPIYR 75 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCC--SSCCSSSCEEEECS
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCcccc--CCCCCCCCEEEeeC
Confidence 568999995 799999999999 6 99999998764322 134 688876543
No 76
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=96.97 E-value=0.00077 Score=46.62 Aligned_cols=46 Identities=17% Similarity=0.387 Sum_probs=37.0
Q ss_pred CCcceEeec-CcccccccccCC-C-CeeEEcCCccceeccccccCcCcc
Q 043301 73 CHPLTLSKT-NHHRCDACLDEC-S-GMAYRCHECCYNLHYHCTALKPSI 118 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~-~-g~~Y~C~~Cd~~lH~~Ca~~p~~i 118 (244)
.|.|.-.+. .+.+|++||+.+ . ..+|+|..|.+..|..|....+..
T Consensus 8 ~H~F~~kt~~~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~~~~~ 56 (61)
T 4b6d_A 8 LHDFVSKTVIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPLP 56 (61)
T ss_dssp CCCEEEEECCSCEECTTTCCEECTTCEEEEESSSSCEECGGGGGGSCSS
T ss_pred ceeEEeeeccCCcccccccCEEEEeeEeeECCCCCCeEchhHhhcCCCC
Confidence 577777665 789999999975 2 257999999999999998776543
No 77
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=96.82 E-value=0.00018 Score=58.19 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=53.0
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEe-ecCCCCChhhhhhhhhhcCCC-CccceeE
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTI-SESYPYSDDTLAQFILRLQNS-LRSKNMS 230 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 230 (244)
|.|.+..|.. +.|-+||+++ .+. ...+++||.+- ++.+|+||| .|.|.|+.. |.+.-|+
T Consensus 23 L~V~l~~a~~------Lpg~~Dp~ak---------v~F-Rg~k~kTkvi~~~~~npvfnE---~F~wpl~~~ld~~e~L~ 83 (144)
T 3l9b_A 23 LIVHLKTVSE------LRGRADRIAK---------VTF-RGQSFYSRVLENCEDVADFDE---TFRWPVASSIDRNEVLE 83 (144)
T ss_dssp EEEEEEEEES------CCSCEEEEEE---------EEE-TTEEEECCCEEEECSCEEEEE---EEEEEESSCCCTTCEEE
T ss_pred EEEEEEEecC------CCCCCCCeEE---------EEE-eccceeeEEeccCCCCceEcc---eEEecCCCCCCCCCEEE
Confidence 4477777753 2257999866 333 24678888333 588888888 699999876 8889999
Q ss_pred EEEeccCccccc
Q 043301 231 VEFWDLDDVLVN 242 (244)
Q Consensus 231 ~~~~~~~~~~~~ 242 (244)
|.|.|+++..+|
T Consensus 84 v~V~d~~~v~~n 95 (144)
T 3l9b_A 84 IQIFNYSKVFSN 95 (144)
T ss_dssp EEEEEECTTSCC
T ss_pred EEEEECccccCC
Confidence 999999998876
No 78
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=96.80 E-value=0.00043 Score=52.46 Aligned_cols=43 Identities=28% Similarity=0.734 Sum_probs=34.6
Q ss_pred ccccccccc-CCCCCcEEeCCC-CCccccccccCCCcCCCCCCCCcceEe
Q 043301 32 VIICDICET-SLQGPAYGCGTC-EFSIHKSCAELPLKIDHPFHCHPLTLS 79 (244)
Q Consensus 32 ~~~C~~C~~-~i~g~~Y~C~~C-~F~lH~~Ca~~p~~i~hp~H~H~L~L~ 79 (244)
...|+.|+. +|.|..|+|.+| +|+|+..|..... |+ .|+|...
T Consensus 31 gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~---H~--~H~f~~i 75 (98)
T 2dip_A 31 GIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC---HL--SHTFTFR 75 (98)
T ss_dssp CCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS---GG--GSCEEEC
T ss_pred CCCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC---CC--CCCeeEe
Confidence 479999996 799999999999 7999999976542 32 6777654
No 79
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.76 E-value=0.00057 Score=47.62 Aligned_cols=33 Identities=33% Similarity=0.757 Sum_probs=29.7
Q ss_pred cccccccccC-CCCeeEEcCCc-cceeccccccCc
Q 043301 83 HHRCDACLDE-CSGMAYRCHEC-CYNLHYHCTALK 115 (244)
Q Consensus 83 ~~~Cd~Cg~~-~~g~~Y~C~~C-d~~lH~~Ca~~p 115 (244)
+..||.|++. +.|.+|+|..| ||+|+..|....
T Consensus 11 ~~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g 45 (63)
T 2e5r_A 11 PVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRG 45 (63)
T ss_dssp CSCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHC
T ss_pred CCCCcCCCCcceecceEEecCCCCchhHHHHHhCC
Confidence 3689999986 99999999999 899999998765
No 80
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=96.73 E-value=0.00022 Score=47.88 Aligned_cols=41 Identities=20% Similarity=0.592 Sum_probs=33.4
Q ss_pred cccccccccCCCCCcEEeCCC-CCccccccccCCCcCCCCCCCCcceEe
Q 043301 32 VIICDICETSLQGPAYGCGTC-EFSIHKSCAELPLKIDHPFHCHPLTLS 79 (244)
Q Consensus 32 ~~~C~~C~~~i~g~~Y~C~~C-~F~lH~~Ca~~p~~i~hp~H~H~L~L~ 79 (244)
...|+.|...| |..|+|.+| +|+|+..|.... .|.|++.-.
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~------~H~H~m~~~ 47 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNTK------SHTHKMVKW 47 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHHH------CCCSSEEEE
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhCC------CCCCceEEe
Confidence 46899999986 899999999 799999998753 256777654
No 81
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=96.39 E-value=0.00068 Score=68.33 Aligned_cols=73 Identities=11% Similarity=0.118 Sum_probs=45.1
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEee-c-CCCCChhhhhhhhh-hcCCCCcccee
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTIS-E-SYPYSDDTLAQFIL-RLQNSLRSKNM 229 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 229 (244)
|.++|-.|.+ |. ++.+|||++++ +.+.. -+...+++|+.+|. + .||.||| ++|.| .+...+.. .|
T Consensus 680 L~V~Visa~~-L~----~~~~DPYV~V~--l~g~p--~d~~~k~kTk~vv~~n~~NPvWnE--e~f~F~~v~~~el~-~L 747 (799)
T 2zkm_X 680 LSITVISGQF-LS----ERSVRTYVEVE--LFGLP--GDPKRRYRTKLSPSTNSINPVWKE--EPFVFEKILMPELA-SL 747 (799)
T ss_dssp EEEEEEEEES-CC----SSCCCEEEEEE--EECCT--TSCCCCEECCCCSSSCCSSCBCCC--CCEEEEEESSGGGC-EE
T ss_pred EEEEEEeccc-cC----ccCCCcEEEEE--EEecC--CCcccceeecccccCCCCCCeeec--ceEEEEEEccCCcc-EE
Confidence 4577777764 43 35699998855 11100 00112345663444 3 6899987 24999 78655555 79
Q ss_pred EEEEeccC
Q 043301 230 SVEFWDLD 237 (244)
Q Consensus 230 ~~~~~~~~ 237 (244)
.|+|||||
T Consensus 748 r~~V~D~d 755 (799)
T 2zkm_X 748 RVAVMEEG 755 (799)
T ss_dssp EEEEEETT
T ss_pred EEEEEEeC
Confidence 99999997
No 82
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=96.38 E-value=0.0022 Score=58.95 Aligned_cols=52 Identities=23% Similarity=0.387 Sum_probs=39.8
Q ss_pred CCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCccccCccccCC
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELKCVL 127 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i~~~~~~h~~ 127 (244)
.|.+...+. .+++|++|+..+.|+ +|+|..|++++|.+|....+. |+.++.+
T Consensus 346 ~h~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~~---C~~~~~~ 401 (406)
T 2vrw_B 346 GHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPP---CGRHGQD 401 (406)
T ss_dssp GCCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSCC---C------
T ss_pred CCCCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCCC---CCCCchh
Confidence 688888776 889999999988774 699999999999999987763 6665554
No 83
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=96.28 E-value=0.0013 Score=49.68 Aligned_cols=33 Identities=30% Similarity=0.732 Sum_probs=29.6
Q ss_pred ccccccccc-CCCCeeEEcCCc-cceeccccccCc
Q 043301 83 HHRCDACLD-ECSGMAYRCHEC-CYNLHYHCTALK 115 (244)
Q Consensus 83 ~~~Cd~Cg~-~~~g~~Y~C~~C-d~~lH~~Ca~~p 115 (244)
...||.|+. .+.|.+|+|..| ||+++..|....
T Consensus 31 gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~ 65 (98)
T 2dip_A 31 GIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSY 65 (98)
T ss_dssp CCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTT
T ss_pred CCCCcCCCCCCcccCeEECCCCCCccHHHHHHccC
Confidence 488999997 589999999999 899999998755
No 84
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=96.15 E-value=0.0026 Score=43.90 Aligned_cols=43 Identities=19% Similarity=0.413 Sum_probs=33.6
Q ss_pred CCCCEeeeeccCCCcccccccccccCC-CC-CcEEeCCCCCccccccccC
Q 043301 16 MHYLIFNENEVGHDDVVIICDICETSL-QG-PAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 16 pH~L~L~~~~~~~~~~~~~C~~C~~~i-~g-~~Y~C~~C~F~lH~~Ca~~ 63 (244)
+|.++- .. ...+.+|+.|++.| +| .+|+|..|++..|+.|...
T Consensus 8 ~H~F~~-kt----~~~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~ 52 (61)
T 4b6d_A 8 LHDFVS-KT----VIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDR 52 (61)
T ss_dssp CCCEEE-EE----CCSCEECTTTCCEECTTCEEEEESSSSCEECGGGGGG
T ss_pred ceeEEe-ee----ccCCcccccccCEEEEeeEeeECCCCCCeEchhHhhc
Confidence 466665 21 24578999999998 45 4799999999999999875
No 85
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=96.07 E-value=0.0011 Score=67.05 Aligned_cols=73 Identities=11% Similarity=0.141 Sum_probs=44.4
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEee--cCCCCChhhhhhhhhh-cCCCCcccee
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTIS--ESYPYSDDTLAQFILR-LQNSLRSKNM 229 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (244)
+.++|-.|.+ |.. ..+|||++++ +.+....- ...+++|+ +|. ..||.|||. .|.|. +...+. ..|
T Consensus 652 L~V~Visaq~-L~~----~~~DPYV~V~--l~g~p~d~-~~~k~kTk-vv~~nglNPvWNE~--~F~F~~v~~pel-a~L 719 (816)
T 3qr0_A 652 IEIKIISAQF-LSD----KQISSYVEVE--MYGLPTDT-VRKKFKTK-IIENNGMDPYYDEK--VFVFKKVVLPDL-AVV 719 (816)
T ss_dssp EEEEEEEEEC-CCS----SCCCEEEEEE--EESSGGGC-EEEEEECC-CBCSCSSCCBCCCC--CEEEEEESCGGG-CEE
T ss_pred EEEEEEEccc-CCC----CCCCCeEEEE--EeCCCccc-ccceeeeE-EecCCCCCCeEcCc--eeEEccccCCCc-cEE
Confidence 4467777764 432 3589998854 11111000 01345777 555 378999872 39988 654443 589
Q ss_pred EEEEeccC
Q 043301 230 SVEFWDLD 237 (244)
Q Consensus 230 ~~~~~~~~ 237 (244)
.++|||||
T Consensus 720 rf~V~D~d 727 (816)
T 3qr0_A 720 RIIVSEEN 727 (816)
T ss_dssp EEEEEETT
T ss_pred EEEEEecC
Confidence 99999997
No 86
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=96.06 E-value=0.0048 Score=45.08 Aligned_cols=34 Identities=21% Similarity=0.607 Sum_probs=30.0
Q ss_pred Cccccccccc-CCCCeeEEcCCc-c---ceeccccccCc
Q 043301 82 NHHRCDACLD-ECSGMAYRCHEC-C---YNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~-~~~g~~Y~C~~C-d---~~lH~~Ca~~p 115 (244)
....||.|++ .+.|.+|+|..| + |+|+..|....
T Consensus 20 ~~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g 58 (82)
T 2fc7_A 20 VGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCL 58 (82)
T ss_dssp SSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCC
T ss_pred CcCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCc
Confidence 4678999997 589999999999 6 99999999764
No 87
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=96.03 E-value=0.0033 Score=60.79 Aligned_cols=43 Identities=28% Similarity=0.565 Sum_probs=36.4
Q ss_pred CCCEeeeeccCCCcccccccccccCCCCC---cEEeCCCCCccccccccCC
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSLQGP---AYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i~g~---~Y~C~~C~F~lH~~Ca~~p 64 (244)
|.++. .. ...+++|+.|+..++|. +|+|..|+|.+|++|+...
T Consensus 519 H~F~~-~~----~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v 564 (587)
T 3ky9_A 519 HDFQM-FS----FEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV 564 (587)
T ss_dssp CCEEE-EC----CSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS
T ss_pred CceeE-Ee----CCCCcccccccccccccccCCcCCCCCCCccchhhhhcC
Confidence 88877 22 35689999999999884 7999999999999999864
No 88
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=95.94 E-value=0.0042 Score=59.99 Aligned_cols=45 Identities=29% Similarity=0.620 Sum_probs=39.8
Q ss_pred CCCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcC
Q 043301 72 HCHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKP 116 (244)
Q Consensus 72 H~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~ 116 (244)
..|.|...+. .++.|++|+..+.|. +|+|..|++.+|.+|....+
T Consensus 517 ~~H~F~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v~ 565 (587)
T 3ky9_A 517 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRVP 565 (587)
T ss_dssp GGCCEEEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGSC
T ss_pred cCCceeEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhhcCC
Confidence 4799999887 899999999987764 69999999999999998774
No 89
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=95.76 E-value=0.0043 Score=58.40 Aligned_cols=51 Identities=18% Similarity=0.423 Sum_probs=36.6
Q ss_pred eEeCCC--CCCCEeeeeccCCCcccccccccccCCCCC---cEEeCCCCCccccccccCCC
Q 043301 10 LKHTSH--MHYLIFNENEVGHDDVVIICDICETSLQGP---AYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 10 I~HpsH--pH~L~L~~~~~~~~~~~~~C~~C~~~i~g~---~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
..|+-- +|.+.. .. ...+++|+.|+..+||. +|+|..|++.+|++|+...+
T Consensus 201 ~~H~niv~~h~f~~-~~----~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp 256 (463)
T 3cxl_A 201 EQIPKYEKIHNFKV-HT----FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVP 256 (463)
T ss_dssp ------CBCCCEEE-EC----CSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSC
T ss_pred ccccccCCCcceEE-ee----cCCCCcchhhhhhhhhHHhcCeeccccCcccccccccccc
Confidence 355522 277776 22 35689999999999984 89999999999999987543
No 90
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=95.75 E-value=0.0053 Score=57.78 Aligned_cols=50 Identities=22% Similarity=0.573 Sum_probs=41.6
Q ss_pred CCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCccccCccc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSINFKELK 124 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i~~~~~~ 124 (244)
.|.|...+. .+++|+.|++.+.|. +|+|..|++.+|.+|....+.. |+..
T Consensus 209 ~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~--C~~~ 262 (463)
T 3cxl_A 209 IHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPND--CKPD 262 (463)
T ss_dssp CCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSB--CCGG
T ss_pred CcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCcccccccccccccc--cccc
Confidence 688888776 899999999988765 6999999999999999877654 5443
No 91
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=95.72 E-value=0.006 Score=55.95 Aligned_cols=43 Identities=26% Similarity=0.531 Sum_probs=35.1
Q ss_pred CCCEeeeeccCCCcccccccccccCCCCC---cEEeCCCCCccccccccCC
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSLQGP---AYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i~g~---~Y~C~~C~F~lH~~Ca~~p 64 (244)
|.+.. .. ...+++|+.|+..++|+ +|+|..|++.+|++|....
T Consensus 347 h~f~~-~~----~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~ 392 (406)
T 2vrw_B 347 HDFQM-FS----FEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRV 392 (406)
T ss_dssp CCEEE-EC----CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGS
T ss_pred CCCcc-cc----CCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhC
Confidence 66655 21 35689999999999884 8999999999999998754
No 92
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=95.44 E-value=0.002 Score=43.11 Aligned_cols=32 Identities=25% Similarity=0.669 Sum_probs=28.2
Q ss_pred cccccccccCCCCeeEEcCCc-cceeccccccCc
Q 043301 83 HHRCDACLDECSGMAYRCHEC-CYNLHYHCTALK 115 (244)
Q Consensus 83 ~~~Cd~Cg~~~~g~~Y~C~~C-d~~lH~~Ca~~p 115 (244)
...||.|++.+ |.+|+|..| ||++...|....
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~ 38 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNTK 38 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHHH
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhCC
Confidence 46799999985 899999999 899999998755
No 93
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=95.35 E-value=0.0028 Score=62.17 Aligned_cols=46 Identities=22% Similarity=0.501 Sum_probs=0.0
Q ss_pred CCcceEeec-CcccccccccCCCCe---eEEcCCccceeccccccCcCcc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGM---AYRCHECCYNLHYHCTALKPSI 118 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~---~Y~C~~Cd~~lH~~Ca~~p~~i 118 (244)
.|.|....+ .+++|++|+..+.|+ +|+|..|+|++|.+|....+..
T Consensus 37 ~H~f~~~~~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~ 86 (674)
T 3pfq_A 37 NHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFS 86 (674)
T ss_dssp --------------------------------------------------
T ss_pred CceEEeeeCCCCCccccccccccccCCceeECCCCCCCcChhhcCcCccc
Confidence 577766655 799999999998774 6999999999999999877654
No 94
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=95.30 E-value=0.0052 Score=62.58 Aligned_cols=72 Identities=8% Similarity=0.114 Sum_probs=43.9
Q ss_pred cceeeecccccccccCCCCcchhhHHHHhhhhcccccccccCCCCceeEee-c-CCCCChhhhhhhhhh-cCCCCcccee
Q 043301 153 EDLTFHDVFSSFTEKDRNQLDDITENIESEIAGIKKTLSETGDQGSKVTIS-E-SYPYSDDTLAQFILR-LQNSLRSKNM 229 (244)
Q Consensus 153 ~~~~v~~~~~~~~~~~~n~l~d~~~~~~~~~~~~~~~l~~~~~~~~~~~i~-~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (244)
+.++|-.|.+ |.. ..+|||++++ +.++. .+...+++|+ +|. + .||.||| ++|.|. +...+. .-|
T Consensus 727 L~V~Visaq~-L~~----~~~DPYV~V~--l~g~p--~D~~~k~kTk-vi~~NglNPvWnE--e~F~F~~V~~pel-a~L 793 (885)
T 3ohm_B 727 LRVKVISGQF-LSD----RKVGIYVEVD--MFGLP--VDTRRKYRTR-TSQGNSFNPVWDE--EPFDFPKVVLPTL-ASL 793 (885)
T ss_dssp EEEEEEEEES-CCS----SCCCEEEEEE--EESST--TTCBCCCCCC-CCSSCSSSCBCCC--CCEEEEEESCGGG-CEE
T ss_pred EEEEEEEecc-Ccc----cCCCcEEEEE--EeCCC--cccccceeeE-EeeCCCcCCeecc--ceeEEeeEEcCCc-CEE
Confidence 4467777764 432 2489998854 11110 1111356788 564 3 7899987 249888 433332 369
Q ss_pred EEEEeccC
Q 043301 230 SVEFWDLD 237 (244)
Q Consensus 230 ~~~~~~~~ 237 (244)
.++|||||
T Consensus 794 rf~V~D~d 801 (885)
T 3ohm_B 794 RIAAFEEG 801 (885)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 99999998
No 95
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=90.49 E-value=0.6 Score=35.10 Aligned_cols=79 Identities=16% Similarity=0.359 Sum_probs=54.5
Q ss_pred cccccccccccCCC-CCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeec--CcccccccccCCC-CeeEEcCCccc
Q 043301 30 DVVIICDICETSLQ-GPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKT--NHHRCDACLDECS-GMAYRCHECCY 105 (244)
Q Consensus 30 ~~~~~C~~C~~~i~-g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~--~~~~Cd~Cg~~~~-g~~Y~C~~Cd~ 105 (244)
.....|..|+.... .....|..|.-.+|..|...+.... +. -.++ .=..|.+|++... .....|..|+-
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~-~~------~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~ 77 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPL-KR------AGWQCPECKVCQNCKQSGEDSKMLVCDTCDK 77 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTT-TS------TTCCCTTTCCCTTTCCCSCCTTEEECSSSCC
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccc-cc------cCccCCcCCcccccCccCCCCCeeECCCCCc
Confidence 34568999988753 3458999999999999998654210 00 0011 1235777887643 35799999999
Q ss_pred eeccccccCc
Q 043301 106 NLHYHCTALK 115 (244)
Q Consensus 106 ~lH~~Ca~~p 115 (244)
.+|..|..-+
T Consensus 78 ~yH~~Cl~pp 87 (111)
T 2ysm_A 78 GYHTFCLQPV 87 (111)
T ss_dssp EEEGGGSSSC
T ss_pred HHhHHhcCCc
Confidence 9999998643
No 96
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=85.13 E-value=1.1 Score=31.24 Aligned_cols=37 Identities=27% Similarity=0.647 Sum_probs=30.8
Q ss_pred CcccccccccccCCCC-CcEEeCCCCCccccccccCCC
Q 043301 29 DDVVIICDICETSLQG-PAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 29 ~~~~~~C~~C~~~i~g-~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
.....+|..|+..-.| ..-.|..|+--+|..|..++.
T Consensus 15 ~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~ 52 (75)
T 2k16_A 15 GNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMA 52 (75)
T ss_dssp SCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSS
T ss_pred CCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCc
Confidence 3456789999998766 688999999999999998654
No 97
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=82.61 E-value=0.57 Score=35.65 Aligned_cols=77 Identities=21% Similarity=0.438 Sum_probs=50.4
Q ss_pred cccccccCC--------CCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeec--CcccccccccCC-CCeeEEcCC
Q 043301 34 ICDICETSL--------QGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKT--NHHRCDACLDEC-SGMAYRCHE 102 (244)
Q Consensus 34 ~C~~C~~~i--------~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~--~~~~Cd~Cg~~~-~g~~Y~C~~ 102 (244)
.|+.|.... .+..-.|..|.-.+|..|...+..+.... -.-.++ .=..|.+|++.. .+....|..
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~----~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~ 78 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAV----KTYKWQCIECKSCILCGTSENDDQLLFCDD 78 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHH----HHTTCCCGGGCCCTTTTCCTTTTTEEECSS
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhcc----CCCccCccccCccCcccccCCCCceEEcCC
Confidence 588886543 23579999999999999998653210000 000000 122577888753 456789999
Q ss_pred ccceeccccccC
Q 043301 103 CCYNLHYHCTAL 114 (244)
Q Consensus 103 Cd~~lH~~Ca~~ 114 (244)
|+-.+|..|..-
T Consensus 79 C~~~yH~~Cl~p 90 (114)
T 2kwj_A 79 CDRGYHMYCLNP 90 (114)
T ss_dssp SCCEEETTTSSS
T ss_pred CCccccccccCC
Confidence 999999999873
No 98
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=81.49 E-value=0.57 Score=35.48 Aligned_cols=77 Identities=22% Similarity=0.497 Sum_probs=50.3
Q ss_pred ccccccccCC-------CCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeec--CcccccccccCC--CCeeEEcC
Q 043301 33 IICDICETSL-------QGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKT--NHHRCDACLDEC--SGMAYRCH 101 (244)
Q Consensus 33 ~~C~~C~~~i-------~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~--~~~~Cd~Cg~~~--~g~~Y~C~ 101 (244)
..|..|...- .+....|..|+-.+|..|......+.... -...+. .=..|.+|+... .+....|.
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~----~~~~W~C~~C~~C~vC~~~~~~~~~ll~Cd 81 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRV----KALRWQCIECKTCSSCRDQGKNADNMLFCD 81 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHH----HTSCCCCTTTCCBTTTCCCCCTTCCCEECT
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHh----hccccccccCCccccccCcCCCccceEEcC
Confidence 4788886542 23689999999999999997532110000 000011 223688888753 34678999
Q ss_pred Cccceecccccc
Q 043301 102 ECCYNLHYHCTA 113 (244)
Q Consensus 102 ~Cd~~lH~~Ca~ 113 (244)
.|+-.+|..|..
T Consensus 82 ~C~~~yH~~Cl~ 93 (112)
T 3v43_A 82 SCDRGFHMECCD 93 (112)
T ss_dssp TTCCEECGGGCS
T ss_pred CCCCeeecccCC
Confidence 999999999975
No 99
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=81.28 E-value=2.4 Score=31.01 Aligned_cols=34 Identities=35% Similarity=0.837 Sum_probs=27.7
Q ss_pred CcccccccccccCCCCCcEEeCCCCCccccccccCC
Q 043301 29 DDVVIICDICETSLQGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 29 ~~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
......|..|+.. |....|..|+-.+|..|...|
T Consensus 22 d~n~~~C~vC~~~--g~LL~CD~C~~~fH~~Cl~Pp 55 (88)
T 1fp0_A 22 DDSATICRVCQKP--GDLVMCNQCEFCFHLDCHLPA 55 (88)
T ss_dssp SSSSSCCSSSCSS--SCCEECTTSSCEECTTSSSTT
T ss_pred CCCCCcCcCcCCC--CCEEECCCCCCceecccCCCC
Confidence 3456789999975 568899999999999998643
No 100
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=78.75 E-value=0.98 Score=32.83 Aligned_cols=33 Identities=27% Similarity=0.677 Sum_probs=28.2
Q ss_pred ccccccccccCCCC----CcEEeCCCCCccccccccC
Q 043301 31 VVIICDICETSLQG----PAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 31 ~~~~C~~C~~~i~g----~~Y~C~~C~F~lH~~Ca~~ 63 (244)
...+|..|++.+.+ .+|+|.=|...+|..|...
T Consensus 37 ~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~ 73 (84)
T 1r79_A 37 VSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKES 73 (84)
T ss_dssp TTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHH
T ss_pred CCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHh
Confidence 35799999999853 4799999999999999864
No 101
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=78.22 E-value=2.4 Score=31.35 Aligned_cols=33 Identities=27% Similarity=0.575 Sum_probs=27.4
Q ss_pred ccccccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 31 VVIICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 31 ~~~~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
...+| .|+... .|....|..|+-.+|..|..++
T Consensus 27 d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~ 60 (98)
T 2lv9_A 27 DVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGID 60 (98)
T ss_dssp CBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCC
T ss_pred CCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCC
Confidence 44678 798876 5688999999999999998764
No 102
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=77.59 E-value=1.1 Score=32.59 Aligned_cols=45 Identities=20% Similarity=0.434 Sum_probs=32.9
Q ss_pred CCcceEeec-CcccccccccCCCC----eeEEcCCccceeccccccCcCc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSG----MAYRCHECCYNLHYHCTALKPS 117 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g----~~Y~C~~Cd~~lH~~Ca~~p~~ 117 (244)
.|-+.-... ...+|.+|++.+.+ -.|+|.-|.+.+|..|....+.
T Consensus 27 ~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~ 76 (84)
T 1r79_A 27 PHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLT 76 (84)
T ss_dssp CCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCS
T ss_pred eeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccC
Confidence 455544433 46799999997432 3699999999999999876643
No 103
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.57 E-value=2.5 Score=27.77 Aligned_cols=33 Identities=30% Similarity=0.687 Sum_probs=27.5
Q ss_pred cccccccccccCCCCCcEEeCCCCCccccccccCC
Q 043301 30 DVVIICDICETSLQGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.....|..|+.. |....|..|.-.+|..|...|
T Consensus 7 ~~~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~pp 39 (56)
T 2yql_A 7 GHEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 39 (56)
T ss_dssp SSCCSCSSSCCS--SCCEECSSSSCEECSSSSSSC
T ss_pred CCCCCCccCCCC--CeEEEcCCCCcceECccCCCC
Confidence 345789999985 678899999999999998754
No 104
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=76.45 E-value=1.9 Score=28.98 Aligned_cols=36 Identities=22% Similarity=0.449 Sum_probs=30.1
Q ss_pred cccccccccccCC--CCCcEEeCCCCCccccccccCCC
Q 043301 30 DVVIICDICETSL--QGPAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i--~g~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
++..+|..|+.+. .++.-+|..|.--+|..|..+..
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~ 41 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITP 41 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcCh
Confidence 4567899999886 45788999999999999998754
No 105
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=76.44 E-value=1.7 Score=31.60 Aligned_cols=88 Identities=19% Similarity=0.321 Sum_probs=53.7
Q ss_pred cccccccccC-CCCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeec----CcccccccccCCCCeeEEcCCccce
Q 043301 32 VIICDICETS-LQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKT----NHHRCDACLDECSGMAYRCHECCYN 106 (244)
Q Consensus 32 ~~~C~~C~~~-i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~----~~~~Cd~Cg~~~~g~~Y~C~~Cd~~ 106 (244)
...|+.|... .....-.|..|+-.++..|....-....+.-.|.+..... ....|..-+ .....|.|..|+.-
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~~~~~~~~h~l~~~~~~~~~~~~~C~~H~--~e~l~~fC~~~~~~ 80 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHE--DEKVNMYCVTDDQL 80 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSCSCSSSTTCCBSSCCCSCCSSCCCCSSCS--SSCCCEEETTTTEE
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhccCCccCCCeeeccccccCccCCcCcCcC--CCcceEECCCCCCc
Confidence 4689999864 3456788999999999999763111011112344331111 223444442 23356899999999
Q ss_pred eccccccCcCccccCccccCCcC
Q 043301 107 LHYHCTALKPSINFKELKCVLHE 129 (244)
Q Consensus 107 lH~~Ca~~p~~i~~~~~~h~~H~ 129 (244)
++..|.... .|..|.
T Consensus 81 iC~~C~~~~--------~H~~H~ 95 (101)
T 2jun_A 81 ICALCKLVG--------RHRDHQ 95 (101)
T ss_dssp ECHHHHHHT--------TTSSSC
T ss_pred cchhcCCCC--------CcCCCC
Confidence 999997533 566665
No 106
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=75.21 E-value=1.4 Score=30.89 Aligned_cols=43 Identities=21% Similarity=0.484 Sum_probs=31.0
Q ss_pred CCcceEeecCcccccccccCC---CCeeEEcCCccceeccccccCc
Q 043301 73 CHPLTLSKTNHHRCDACLDEC---SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 73 ~H~L~L~~~~~~~Cd~Cg~~~---~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
.|-++........|.+|++.. .+....|..|+..+|..|...+
T Consensus 6 ~~~~~~~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~ 51 (71)
T 2ku3_A 6 HHHMQSLIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP 51 (71)
T ss_dssp ----CCCCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS
T ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCC
Confidence 344444444788999999863 4567899999999999998765
No 107
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=74.68 E-value=1.2 Score=32.54 Aligned_cols=61 Identities=18% Similarity=0.320 Sum_probs=41.6
Q ss_pred cccccccccCCCCCcEEeCCCCCccccccccCCCcCCCC-CCCCcceEeecCcccccccccC
Q 043301 32 VIICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHP-FHCHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 32 ~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp-~H~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
.-.|..|.-.-.+..|.|.+|+-++|..|..-+...+.. .+.-.++-.+.....|--|...
T Consensus 15 D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 458999988778889999999999999998765444332 2233333333356667666553
No 108
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=73.43 E-value=2.9 Score=28.13 Aligned_cols=50 Identities=24% Similarity=0.574 Sum_probs=36.5
Q ss_pred cccccccccccCCCCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccC
Q 043301 30 DVVIICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
....+|..|+. .|....|..|+-.+|..|...|.... +....+|..|...
T Consensus 9 ~~~~~C~vC~~--~g~ll~CD~C~~~fH~~Cl~p~l~~~-----------p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 9 DHQDYCEVCQQ--GGEIILCDTCPRAYHMVCLDPDMEKA-----------PEGKWSCPHCEKE 58 (61)
T ss_dssp CCCSSCTTTSC--CSSEEECSSSSCEEEHHHHCTTCCSC-----------CCSSCCCTTGGGG
T ss_pred CCCCCCccCCC--CCcEEECCCCChhhhhhccCCCCCCC-----------CCCceECcccccc
Confidence 45678999987 36789999999999999998653211 1146778877654
No 109
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=72.82 E-value=3.2 Score=28.51 Aligned_cols=31 Identities=19% Similarity=0.486 Sum_probs=25.7
Q ss_pred cccccccccCCCCCcEEeCCCCCccccccccCC
Q 043301 32 VIICDICETSLQGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 32 ~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
...|..|++. |....|..|+-.+|..|...|
T Consensus 12 ~~~C~vC~~~--~~ll~Cd~C~~~~H~~Cl~P~ 42 (66)
T 2lri_C 12 GARCGVCGDG--TDVLRCTHCAAAFHWRCHFPA 42 (66)
T ss_dssp TCCCTTTSCC--TTCEECSSSCCEECHHHHCTT
T ss_pred CCCcCCCCCC--CeEEECCCCCCceecccCCCc
Confidence 4679999864 568899999999999998644
No 110
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=72.38 E-value=1 Score=33.26 Aligned_cols=34 Identities=26% Similarity=0.698 Sum_probs=28.8
Q ss_pred ccccccccccCC----CC-CcEEeCCCCCccccccccCC
Q 043301 31 VVIICDICETSL----QG-PAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 31 ~~~~C~~C~~~i----~g-~~Y~C~~C~F~lH~~Ca~~p 64 (244)
....|.+|++.| .| .+-.|.+|+|-|+..|.++-
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYE 53 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYE 53 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHH
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHH
Confidence 346899999997 34 68899999999999999863
No 111
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=72.38 E-value=3.8 Score=27.87 Aligned_cols=50 Identities=26% Similarity=0.644 Sum_probs=35.6
Q ss_pred cccccccccccCCCCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccC
Q 043301 30 DVVIICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
.....|..|+.. |....|..|+-.+|..|...|... .+....+|..|...
T Consensus 6 ~~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~ppl~~-----------~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDG--GELICCDGCPRAFHLACLSPPLRE-----------IPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCC--SSCEECSSCCCEECTTTSSSCCSS-----------CCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCC--CCEEEcCCCChhhcccccCCCcCc-----------CCCCCeECccccCc
Confidence 345789999874 678999999999999998743221 11146678777653
No 112
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=71.45 E-value=3.5 Score=26.36 Aligned_cols=31 Identities=19% Similarity=0.506 Sum_probs=25.8
Q ss_pred cccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 34 ICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 34 ~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.|..|+... .+..-.|..|+-.+|..|...|
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~ 33 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPA 33 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTT
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCC
Confidence 588998875 4578999999999999998643
No 113
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=71.11 E-value=4.1 Score=27.08 Aligned_cols=31 Identities=32% Similarity=0.752 Sum_probs=26.4
Q ss_pred cccccccccCCCCCcEEeCCCCCccccccccCC
Q 043301 32 VIICDICETSLQGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 32 ~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
...|..|+.. |..-.|..|+-.+|..|...|
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~pp 35 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 35 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECGGGSSSC
T ss_pred CCCCcCCCCC--CcEEEcCCCCcCEECCcCCCC
Confidence 4689999884 678999999999999998744
No 114
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=69.39 E-value=5.9 Score=26.51 Aligned_cols=49 Identities=27% Similarity=0.573 Sum_probs=34.4
Q ss_pred ccccccccccCCCCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccC
Q 043301 31 VVIICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 31 ~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
....|..|+. .|....|..|+-.+|..|...|... .+....+|..|...
T Consensus 8 ~~~~C~vC~~--~g~ll~Cd~C~~~fH~~Cl~ppl~~-----------~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 8 HMEFCRVCKD--GGELLCCDTCPSSYHIHCLNPPLPE-----------IPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCTTTCC--CSSCBCCSSSCCCBCSSSSSSCCSS-----------CCSSCCCCTTTTTT
T ss_pred CCCcCCCCCC--CCCEEEcCCCCHHHcccccCCCcCc-----------CCCCccCChhhcCc
Confidence 4568999986 3568889999999999998743321 11145677777553
No 115
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=68.89 E-value=4.2 Score=27.25 Aligned_cols=35 Identities=23% Similarity=0.563 Sum_probs=28.9
Q ss_pred CcccccccccCC--CCeeEEcCCccceeccccccCcC
Q 043301 82 NHHRCDACLDEC--SGMAYRCHECCYNLHYHCTALKP 116 (244)
Q Consensus 82 ~~~~Cd~Cg~~~--~g~~Y~C~~Cd~~lH~~Ca~~p~ 116 (244)
....|..|++.. .++...|..|+.-+|..|+.+..
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~ 41 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITP 41 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcCh
Confidence 456788999864 46678999999999999998873
No 116
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=68.08 E-value=3.9 Score=28.30 Aligned_cols=34 Identities=21% Similarity=0.521 Sum_probs=28.7
Q ss_pred CcccccccccCCCC-eeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECSG-MAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g-~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....|.+|++.-.| ....|..|+.-+|..|+.++
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~ 51 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIM 51 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCS
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCC
Confidence 45679999997655 57899999999999999877
No 117
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=66.74 E-value=4 Score=27.46 Aligned_cols=35 Identities=20% Similarity=0.487 Sum_probs=28.7
Q ss_pred cccccccccccCC---CCCcEEeCCCCCccccccccCC
Q 043301 30 DVVIICDICETSL---QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 30 ~~~~~C~~C~~~i---~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.....|..|+..- .+....|..|+-.+|..|...|
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~ 41 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPH 41 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCc
Confidence 3457899999863 3678999999999999998754
No 118
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=65.69 E-value=4.4 Score=29.23 Aligned_cols=21 Identities=38% Similarity=0.988 Sum_probs=14.5
Q ss_pred ccccccccCC--CCCcEEeCCCC
Q 043301 33 IICDICETSL--QGPAYGCGTCE 53 (244)
Q Consensus 33 ~~C~~C~~~i--~g~~Y~C~~C~ 53 (244)
..|-.|...+ .|..|+|..|+
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~ 25 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCA 25 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTC
T ss_pred CCCCCCCCccccCCCceECcccc
Confidence 3577787776 34567788885
No 119
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=64.84 E-value=5.5 Score=27.42 Aligned_cols=36 Identities=31% Similarity=0.712 Sum_probs=29.9
Q ss_pred CcccccccccccCCCC-CcEEeCCCCCccccccccCCC
Q 043301 29 DDVVIICDICETSLQG-PAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 29 ~~~~~~C~~C~~~i~g-~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
..+..+| .|+.+-.| +.-+|..|.--+|..|..+..
T Consensus 16 ~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~ 52 (68)
T 3o70_A 16 FQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRK 52 (68)
T ss_dssp TTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCT
T ss_pred CCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCc
Confidence 3467899 99988655 689999999999999998754
No 120
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=64.53 E-value=17 Score=27.32 Aligned_cols=72 Identities=21% Similarity=0.362 Sum_probs=50.0
Q ss_pred cccccccccccCCCCCcEEeC--CCCCccccccccCCCcCCCCCCCCcceEeec-CcccccccccCCCCeeEEcCCccce
Q 043301 30 DVVIICDICETSLQGPAYGCG--TCEFSIHKSCAELPLKIDHPFHCHPLTLSKT-NHHRCDACLDECSGMAYRCHECCYN 106 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~--~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~-~~~~Cd~Cg~~~~g~~Y~C~~Cd~~ 106 (244)
....+|..|+. .|....|. .|...+|..|..+... |. -.++ ..-.|..||+.. .|.|..|...
T Consensus 13 ~~~~~C~~C~~--~G~ll~CD~~~Cp~~fH~~Cl~L~~~---P~------g~W~Cp~c~C~~C~k~~---~~~C~~Cp~s 78 (107)
T 4gne_A 13 MHEDYCFQCGD--GGELVMCDKKDCPKAYHLLCLNLTQP---PY------GKWECPWHQCDECSSAA---VSFCEFCPHS 78 (107)
T ss_dssp SSCSSCTTTCC--CSEEEECCSTTCCCEECTGGGTCSSC---CS------SCCCCGGGBCTTTCSBC---CEECSSSSCE
T ss_pred CCCCCCCcCCC--CCcEeEECCCCCCcccccccCcCCcC---CC------CCEECCCCCCCcCCCCC---CcCcCCCCcc
Confidence 44578999985 36688999 8999999999874221 10 0011 233566777754 3899999999
Q ss_pred eccccccCc
Q 043301 107 LHYHCTALK 115 (244)
Q Consensus 107 lH~~Ca~~p 115 (244)
+|..|....
T Consensus 79 fC~~c~~g~ 87 (107)
T 4gne_A 79 FCKDHEKGA 87 (107)
T ss_dssp ECTTTCTTS
T ss_pred hhhhccCCc
Confidence 999998654
No 121
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=62.02 E-value=4.7 Score=29.11 Aligned_cols=35 Identities=17% Similarity=0.500 Sum_probs=28.6
Q ss_pred ccccccccccCCC---CCcEEeCCCCCccccccccCCC
Q 043301 31 VVIICDICETSLQ---GPAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 31 ~~~~C~~C~~~i~---g~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
....|..|+..-. +....|..|+-.+|..|...|.
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl 52 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQV 52 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcc
Confidence 3468999998753 5789999999999999987543
No 122
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=61.56 E-value=3.1 Score=31.16 Aligned_cols=52 Identities=19% Similarity=0.452 Sum_probs=34.6
Q ss_pred ccccccccCC--CCCcEEeCCCC--CccccccccCCCcCCCCCCCCcceEeec---CcccccccccCC
Q 043301 33 IICDICETSL--QGPAYGCGTCE--FSIHKSCAELPLKIDHPFHCHPLTLSKT---NHHRCDACLDEC 93 (244)
Q Consensus 33 ~~C~~C~~~i--~g~~Y~C~~C~--F~lH~~Ca~~p~~i~hp~H~H~L~L~~~---~~~~Cd~Cg~~~ 93 (244)
..|-.|...+ .|..|+|+.|+ |.....|-+- ..+|..... ..++|+.|..++
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC---------~q~LevLkACGAvdYFC~~chgLi 91 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDC---------HQPLQVLKACGAVDYFCQHGHGLI 91 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTT---------CSBCEEEEETTEEEEEETTTTEEE
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcch---------hhHHHHHHHhcCcchhhccCCcee
Confidence 6899999886 35677899995 6666555332 345666554 456777766654
No 123
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=60.14 E-value=7.4 Score=26.07 Aligned_cols=34 Identities=21% Similarity=0.512 Sum_probs=27.7
Q ss_pred CcccccccccCC---CCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDEC---SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~---~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....|.+|+..- .+....|..|+..+|..|...+
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~ 41 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPH 41 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCc
Confidence 356899999852 3678999999999999998754
No 124
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=59.88 E-value=3.9 Score=28.49 Aligned_cols=49 Identities=27% Similarity=0.694 Sum_probs=36.3
Q ss_pred cccccccccccCC---CCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCccccccccc
Q 043301 30 DVVIICDICETSL---QGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLD 91 (244)
Q Consensus 30 ~~~~~C~~C~~~i---~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~ 91 (244)
.....|..|+... .+....|..|+-.+|..|...+. + +.+..+|..|..
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~-v------------P~g~W~C~~C~~ 65 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-I------------PEGQWLCRHCLQ 65 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS-C------------CSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc-C------------CCCCcCCccCcC
Confidence 4467999998874 35789999999999999988652 1 114667777754
No 125
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=59.12 E-value=9.4 Score=30.88 Aligned_cols=47 Identities=26% Similarity=0.528 Sum_probs=34.4
Q ss_pred ccccccccCCCCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccC
Q 043301 33 IICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 33 ~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
.+|..|+.. |....|..|.-.+|..|...|... .+.+...|..|...
T Consensus 5 ~~C~~C~~~--g~ll~Cd~C~~~~H~~C~~p~l~~-----------~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 5 DWCAVCQNG--GELLCCEKCPKVFHLSCHVPTLTN-----------FPSGEWICTFCRDL 51 (184)
T ss_dssp SSCTTTCCC--SSCEECSSSSCEECTTTSSSCCSS-----------CCSSCCCCTTTSCS
T ss_pred CccccCCCC--CeeeecCCCCcccCccccCCCCCC-----------CCCCCEECccccCc
Confidence 579999865 568899999999999997643221 11256788888775
No 126
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=56.09 E-value=7.4 Score=29.04 Aligned_cols=77 Identities=14% Similarity=0.276 Sum_probs=44.1
Q ss_pred ccccccccCCCCCcEEeCCCCCccccccccCCCcCCCCCC--CCcceEeec--CcccccccccC-----CCCeeEEcCCc
Q 043301 33 IICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFH--CHPLTLSKT--NHHRCDACLDE-----CSGMAYRCHEC 103 (244)
Q Consensus 33 ~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H--~H~L~L~~~--~~~~Cd~Cg~~-----~~g~~Y~C~~C 103 (244)
..|.+|+.. .|..|++-+|..|...|....-... ...-...+. .-..|..|+.. .......|..|
T Consensus 8 ~~C~~C~~~------~C~~C~~c~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~~m~~C~~C 81 (117)
T 4bbq_A 8 RKCKACVQG------ECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCIC 81 (117)
T ss_dssp SCSHHHHSC------CCSCSHHHHHSGGGTSCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGGSCEEETTT
T ss_pred CcCcCcCCc------CCCCCCCCcCCcccCCCCccccchhheeeccccccccccccccCcccccccccccCcceEEeeec
Confidence 467777764 3899999999888765533221110 000000000 22333344331 22335789999
Q ss_pred cceeccccccCc
Q 043301 104 CYNLHYHCTALK 115 (244)
Q Consensus 104 d~~lH~~Ca~~p 115 (244)
+-.+|..|....
T Consensus 82 ~~~~H~~C~~~~ 93 (117)
T 4bbq_A 82 NEIVHPGCLQMD 93 (117)
T ss_dssp CCEECGGGCCSC
T ss_pred CCeEECCCCCCC
Confidence 999999998765
No 127
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=55.53 E-value=3.8 Score=32.83 Aligned_cols=34 Identities=29% Similarity=0.646 Sum_probs=28.2
Q ss_pred cccccccccccCC--CCCcEEeCCCCCccccccccCC
Q 043301 30 DVVIICDICETSL--QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 30 ~~~~~C~~C~~~i--~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
....+| .|+.+. .|..-+|..|.-.+|..|....
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~ 41 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGIL 41 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCC
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCc
Confidence 456899 999985 4678999999999999999764
No 128
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=55.28 E-value=3.8 Score=27.79 Aligned_cols=31 Identities=23% Similarity=0.603 Sum_probs=25.3
Q ss_pred ccccccccCCCCC-cEEeCCCCCccccccccC
Q 043301 33 IICDICETSLQGP-AYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 33 ~~C~~C~~~i~g~-~Y~C~~C~F~lH~~Ca~~ 63 (244)
..|-+|...+... .|+|..|..+++..|-.+
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~f 47 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVF 47 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHH
Confidence 4699999988544 599999999998888654
No 129
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=55.18 E-value=8.9 Score=26.34 Aligned_cols=35 Identities=23% Similarity=0.504 Sum_probs=28.8
Q ss_pred cccccccccccCC-CC-CcEEeCCCCCccccccccCCC
Q 043301 30 DVVIICDICETSL-QG-PAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i-~g-~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
....+| .|+.+- .| +.-+|..|.--+|..|..+..
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~ 50 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINN 50 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCT
T ss_pred CcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCc
Confidence 456899 699885 45 688999999999999998754
No 130
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.16 E-value=14 Score=25.93 Aligned_cols=31 Identities=23% Similarity=0.607 Sum_probs=24.3
Q ss_pred cccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 34 ICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 34 ~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.|..|+..- .+....|..|+-.+|..|...|
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPP 59 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCC
Confidence 567777654 4567899999999999998744
No 131
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=53.43 E-value=9.6 Score=27.41 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=27.5
Q ss_pred CcccccccccCC---CCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDEC---SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~---~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
...+|.+|++.- .+....|..|+..+|..|..-+
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ 51 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc
Confidence 356899999863 3678899999999999997633
No 132
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=52.51 E-value=8.4 Score=29.62 Aligned_cols=56 Identities=21% Similarity=0.423 Sum_probs=37.4
Q ss_pred ccccccccccCCC--CCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccCCCC
Q 043301 31 VVIICDICETSLQ--GPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDECSG 95 (244)
Q Consensus 31 ~~~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~~~g 95 (244)
....|..|+.... .-.++|..|+.+++..|...-..+ |... .....|+.|-..+.|
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~--p~~~-------~p~RVC~~C~~~l~g 125 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALT--PSSK-------KPVRVCDACFNDLQG 125 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEECC--TTCS-------SCEEECHHHHHHTTC
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhCCcccc--CCCC-------CCCEeCHHHHHHhcC
Confidence 3468999998753 346999999999999998743222 1111 135678888665544
No 133
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=52.41 E-value=6.6 Score=27.55 Aligned_cols=35 Identities=26% Similarity=0.577 Sum_probs=28.9
Q ss_pred cccccccccccCC--CCCcEEeCCCCCccccccccCCC
Q 043301 30 DVVIICDICETSL--QGPAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i--~g~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
....+| .|+.+- .++.-+|..|.--+|..|..+..
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~ 46 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEE 46 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCH
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCccc
Confidence 456788 899886 46789999999999999998643
No 134
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=52.32 E-value=11 Score=25.83 Aligned_cols=33 Identities=24% Similarity=0.708 Sum_probs=27.9
Q ss_pred CcccccccccCCCC-eeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECSG-MAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g-~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....| .|++...| +...|..|+--.|..|+.+.
T Consensus 18 ~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~ 51 (68)
T 3o70_A 18 GLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIR 51 (68)
T ss_dssp TCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCC
T ss_pred CceEe-ECCCcCCCCCEEECCCCCccccccccCcC
Confidence 56778 99997555 57899999999999999887
No 135
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=51.69 E-value=18 Score=26.98 Aligned_cols=31 Identities=23% Similarity=0.653 Sum_probs=23.4
Q ss_pred cccccccCC--CCCcEEeCCCCCccccccccCC
Q 043301 34 ICDICETSL--QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 34 ~C~~C~~~i--~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.|.+|+... .+....|..|+-.+|..|...|
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~ 95 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPP 95 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCC
Confidence 566666643 3468899999999999998643
No 136
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.38 E-value=13 Score=24.16 Aligned_cols=32 Identities=22% Similarity=0.588 Sum_probs=26.4
Q ss_pred CcccccccccCCCCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....|.+|+.. |....|..|+-.+|..|..-+
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~pp 39 (56)
T 2yql_A 8 HEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 39 (56)
T ss_dssp SCCSCSSSCCS--SCCEECSSSSCEECSSSSSSC
T ss_pred CCCCCccCCCC--CeEEEcCCCCcceECccCCCC
Confidence 45689999985 567889999999999998743
No 137
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.07 E-value=11 Score=27.36 Aligned_cols=34 Identities=24% Similarity=0.502 Sum_probs=27.8
Q ss_pred ccccccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 31 VVIICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 31 ~~~~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
....|..|+... .+....|..|+-.+|..|...|
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Pp 49 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPP 49 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSC
T ss_pred CCCCCccCCCcCCCCCEEEcCCCCchhccccCCCC
Confidence 456899998875 3568999999999999998743
No 138
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=49.68 E-value=16 Score=27.06 Aligned_cols=31 Identities=26% Similarity=0.600 Sum_probs=23.0
Q ss_pred cccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 34 ICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 34 ~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.|..|+... ......|..|+-.+|..|...|
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~pp 87 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPV 87 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSC
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCc
Confidence 355565554 2358999999999999998744
No 139
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=49.20 E-value=11 Score=30.81 Aligned_cols=47 Identities=28% Similarity=0.638 Sum_probs=32.8
Q ss_pred ccccccccCCCCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccC
Q 043301 33 IICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 33 ~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
.+|..|+.. |....|..|+-.+|..|...|... - +.+.+.|..|...
T Consensus 3 ~~C~~C~~~--g~ll~Cd~C~~~~H~~Cl~p~l~~-~----------p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 3 TICRVCQKP--GDLVMCNQCEFCFHLDCHLPALQD-V----------PGEEWSCSLCHVL 49 (189)
T ss_dssp CCBTTTCCC--SSCCCCTTTCCBCCSTTSTTCCSS-C----------CCTTCCTTTTSCS
T ss_pred CcCccCCCC--CceeECCCCCchhccccCCCCccc-C----------CCCCCCCcCccCC
Confidence 479999865 456779999999999998643221 1 1156778888654
No 140
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=48.95 E-value=13 Score=24.58 Aligned_cols=32 Identities=22% Similarity=0.588 Sum_probs=26.3
Q ss_pred CcccccccccCCCCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....|.+|+.. |....|..|+-.+|..|..-+
T Consensus 4 ~~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~pp 35 (60)
T 2puy_A 4 HEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 35 (60)
T ss_dssp CCSSCTTTCCC--SSCEECSSSSCEECGGGSSSC
T ss_pred CCCCCcCCCCC--CcEEEcCCCCcCEECCcCCCC
Confidence 35679999985 567889999999999998743
No 141
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=48.47 E-value=9.8 Score=26.64 Aligned_cols=36 Identities=28% Similarity=0.647 Sum_probs=30.2
Q ss_pred cccccccccccC-CCCCcEEeC--CCCCccccccccCCCc
Q 043301 30 DVVIICDICETS-LQGPAYGCG--TCEFSIHKSCAELPLK 66 (244)
Q Consensus 30 ~~~~~C~~C~~~-i~g~~Y~C~--~C~F~lH~~Ca~~p~~ 66 (244)
....+| .|+.. -.|+.-+|. .|..-+|..|..++..
T Consensus 14 ~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~ 52 (78)
T 1wew_A 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDK 52 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCT
T ss_pred CCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccc
Confidence 467899 79998 467889999 9999999999987543
No 142
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=48.10 E-value=8.7 Score=26.61 Aligned_cols=33 Identities=24% Similarity=0.587 Sum_probs=27.9
Q ss_pred ccccccccccCCC-CCcEEeCCCCCccccccccCC
Q 043301 31 VVIICDICETSLQ-GPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 31 ~~~~C~~C~~~i~-g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
...+| .|+.+-. ++.-+|..|.--+|..|..+.
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~ 48 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGIS 48 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCC
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccc
Confidence 45789 7998875 478999999999999999864
No 143
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=46.67 E-value=15 Score=24.81 Aligned_cols=31 Identities=29% Similarity=0.684 Sum_probs=26.0
Q ss_pred CcccccccccCCCCeeEEcCCccceeccccccC
Q 043301 82 NHHRCDACLDECSGMAYRCHECCYNLHYHCTAL 114 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~ 114 (244)
....|.+|+.. |....|..|+-.+|..|..-
T Consensus 7 ~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p 37 (66)
T 1xwh_A 7 NEDECAVCRDG--GELICCDGCPRAFHLACLSP 37 (66)
T ss_dssp CCCSBSSSSCC--SSCEECSSCCCEECTTTSSS
T ss_pred CCCCCccCCCC--CCEEEcCCCChhhcccccCC
Confidence 46789999975 56789999999999999873
No 144
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.45 E-value=9.1 Score=26.81 Aligned_cols=32 Identities=38% Similarity=0.867 Sum_probs=26.7
Q ss_pred cccccccccccCCCCCcEEeCCCCCcccccccc
Q 043301 30 DVVIICDICETSLQGPAYGCGTCEFSIHKSCAE 62 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~ 62 (244)
+.-..|.+|...+. ....|..|+-.+|..|..
T Consensus 13 ~~i~~C~IC~~~i~-~g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 13 DAVKICNICHSLLI-QGQSCETCGIRMHLPCVA 44 (74)
T ss_dssp SSSCBCSSSCCBCS-SSEECSSSCCEECHHHHH
T ss_pred CCCCcCcchhhHcc-cCCccCCCCchhhHHHHH
Confidence 44568999988874 468999999999999986
No 145
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.39 E-value=15 Score=26.04 Aligned_cols=34 Identities=18% Similarity=0.472 Sum_probs=27.4
Q ss_pred cccccccccccCCC--CCcEEeCCCCCccccccccC
Q 043301 30 DVVIICDICETSLQ--GPAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 30 ~~~~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~ 63 (244)
.....|..|+.... .-..+|..|+.+++..|...
T Consensus 12 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 12 NNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 34568999998853 34699999999999999864
No 146
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=45.91 E-value=10 Score=25.50 Aligned_cols=35 Identities=26% Similarity=0.532 Sum_probs=27.7
Q ss_pred cccccccccccCCCCCcEEeCCCC---CccccccccCCC
Q 043301 30 DVVIICDICETSLQGPAYGCGTCE---FSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~---F~lH~~Ca~~p~ 65 (244)
.+..+| .|+.+-.|..-.|..|+ --+|..|..+..
T Consensus 9 ~e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~ 46 (62)
T 2g6q_A 9 NEPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTY 46 (62)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSS
T ss_pred CCCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCc
Confidence 457899 89998778888999954 689999998643
No 147
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=45.78 E-value=14 Score=27.51 Aligned_cols=33 Identities=30% Similarity=0.552 Sum_probs=27.9
Q ss_pred cccccccccC--CCCeeEEcC-CccceeccccccCc
Q 043301 83 HHRCDACLDE--CSGMAYRCH-ECCYNLHYHCTALK 115 (244)
Q Consensus 83 ~~~Cd~Cg~~--~~g~~Y~C~-~Cd~~lH~~Ca~~p 115 (244)
...|..|++. -.+....|. .|+--+|..|+.+.
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt 38 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMT 38 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCC
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcC
Confidence 3579999997 456788998 99999999999887
No 148
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=45.56 E-value=9 Score=27.65 Aligned_cols=32 Identities=25% Similarity=0.661 Sum_probs=27.3
Q ss_pred cccccccccCCCCCcEEeCC--CCCccccccccC
Q 043301 32 VIICDICETSLQGPAYGCGT--CEFSIHKSCAEL 63 (244)
Q Consensus 32 ~~~C~~C~~~i~g~~Y~C~~--C~F~lH~~Ca~~ 63 (244)
...|.+|+..-.|..-+|.. |.-.+|..||..
T Consensus 17 ~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 17 KLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHH
T ss_pred cCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHH
Confidence 56899998776688999974 999999999974
No 149
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=45.44 E-value=8.8 Score=27.69 Aligned_cols=43 Identities=21% Similarity=0.561 Sum_probs=31.8
Q ss_pred CCcceEeec-CcccccccccCCCCeeEEcCC--ccceeccccccCc
Q 043301 73 CHPLTLSKT-NHHRCDACLDECSGMAYRCHE--CCYNLHYHCTALK 115 (244)
Q Consensus 73 ~H~L~L~~~-~~~~Cd~Cg~~~~g~~Y~C~~--Cd~~lH~~Ca~~p 115 (244)
.|-|.+... -...|.+|++...|-..+|.. |.-.+|+.||...
T Consensus 6 ~~~~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 6 HHHMNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp ---CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHH
T ss_pred ccccCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHC
Confidence 445555443 456899999876788899984 9999999999765
No 150
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=45.39 E-value=15 Score=26.83 Aligned_cols=31 Identities=26% Similarity=0.628 Sum_probs=25.7
Q ss_pred ccccccccCC-CCeeEEcCCccceeccccccCc
Q 043301 84 HRCDACLDEC-SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 84 ~~Cd~Cg~~~-~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
..| +|+... .|....|..|+-.+|..|+..+
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~ 60 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGID 60 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCC
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCC
Confidence 567 788864 5778999999999999999765
No 151
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=44.85 E-value=9.6 Score=25.43 Aligned_cols=32 Identities=22% Similarity=0.586 Sum_probs=27.0
Q ss_pred CcccccccccCCCCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....|.+|+.. |....|..|+-.+|..|...+
T Consensus 10 ~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~ 41 (61)
T 2l5u_A 10 HQDYCEVCQQG--GEIILCDTCPRAYHMVCLDPD 41 (61)
T ss_dssp CCSSCTTTSCC--SSEEECSSSSCEEEHHHHCTT
T ss_pred CCCCCccCCCC--CcEEECCCCChhhhhhccCCC
Confidence 46789999984 567889999999999999765
No 152
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=44.43 E-value=28 Score=25.36 Aligned_cols=35 Identities=26% Similarity=0.618 Sum_probs=28.3
Q ss_pred cccccccccccCCCCCcEEeCC--CC-CccccccccCCC
Q 043301 30 DVVIICDICETSLQGPAYGCGT--CE-FSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~--C~-F~lH~~Ca~~p~ 65 (244)
.+..+| .|+..-.|..-.|.. |. --+|..|..+..
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~ 71 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTT 71 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSS
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCc
Confidence 467899 999987788889999 66 479999998643
No 153
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=44.43 E-value=15 Score=24.73 Aligned_cols=33 Identities=21% Similarity=0.472 Sum_probs=26.9
Q ss_pred CcccccccccCCCCeeEEcCCcc---ceeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHECC---YNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd---~~lH~~Ca~~p 115 (244)
....| .|++.-.|....|..|+ --+|..|+.+.
T Consensus 10 e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~ 45 (62)
T 2g6q_A 10 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLT 45 (62)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcC
Confidence 45678 89997778888999854 67999999876
No 154
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=43.41 E-value=11 Score=26.31 Aligned_cols=33 Identities=24% Similarity=0.533 Sum_probs=28.6
Q ss_pred CcccccccccC-CCCeeEEcC--CccceeccccccCc
Q 043301 82 NHHRCDACLDE-CSGMAYRCH--ECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~-~~g~~Y~C~--~Cd~~lH~~Ca~~p 115 (244)
....| .|++. -.|+.-.|. .|..-.|..|+.++
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~ 50 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILP 50 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCC
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccc
Confidence 45678 79997 678888999 99999999999887
No 155
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=43.36 E-value=25 Score=25.46 Aligned_cols=30 Identities=23% Similarity=0.698 Sum_probs=25.8
Q ss_pred CcccccccccCCCCeeEEcCCccceecccccc
Q 043301 82 NHHRCDACLDECSGMAYRCHECCYNLHYHCTA 113 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~ 113 (244)
....|.+|+.. |-...|..|+-.+|..|..
T Consensus 24 n~~~C~vC~~~--g~LL~CD~C~~~fH~~Cl~ 53 (88)
T 1fp0_A 24 SATICRVCQKP--GDLVMCNQCEFCFHLDCHL 53 (88)
T ss_dssp SSSCCSSSCSS--SCCEECTTSSCEECTTSSS
T ss_pred CCCcCcCcCCC--CCEEECCCCCCceecccCC
Confidence 67799999986 4578899999999999984
No 156
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=43.09 E-value=21 Score=24.65 Aligned_cols=34 Identities=26% Similarity=0.697 Sum_probs=27.8
Q ss_pred cccccccccccCCCCCcEEeCC--CCC-ccccccccCC
Q 043301 30 DVVIICDICETSLQGPAYGCGT--CEF-SIHKSCAELP 64 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~--C~F-~lH~~Ca~~p 64 (244)
....+| .|+..-.|..-.|.. |.. -+|..|..+.
T Consensus 14 ~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~ 50 (71)
T 1wen_A 14 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT 50 (71)
T ss_dssp TSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCS
T ss_pred CCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcC
Confidence 456899 799877788899999 764 8999999864
No 157
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=42.79 E-value=16 Score=30.12 Aligned_cols=59 Identities=22% Similarity=0.495 Sum_probs=39.1
Q ss_pred ccccccccccCCCCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccCCC-CeeEEcCC
Q 043301 31 VVIICDICETSLQGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDECS-GMAYRCHE 102 (244)
Q Consensus 31 ~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~~~-g~~Y~C~~ 102 (244)
....|..|+.. |-..-|..|+-.+|..|...|... .+.+..+|..|..... ...|.|..
T Consensus 6 ~~~~C~~C~~~--g~ll~Cd~C~~~~H~~Cl~p~l~~-----------~p~~~W~C~~C~~~~~~~~~~~c~~ 65 (207)
T 3u5n_A 6 NEDWCAVCQNG--GDLLCCEKCPKVFHLTCHVPTLLS-----------FPSGDWICTFCRDIGKPEVEYDCDN 65 (207)
T ss_dssp SCSSBTTTCCC--EEEEECSSSSCEECTTTSSSCCSS-----------CCSSCCCCTTTSCSSSCSSCCSCC-
T ss_pred CCCCCCCCCCC--CceEEcCCCCCccCCccCCCCCCC-----------CCCCCEEeCceeCcccccccccccc
Confidence 34679999865 457889999999999998643221 1125688998887543 23455543
No 158
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=42.42 E-value=9.7 Score=27.47 Aligned_cols=34 Identities=24% Similarity=0.610 Sum_probs=28.0
Q ss_pred CcccccccccCC---CCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDEC---SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~---~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....|.+|+... .+....|..|+..+|..|...+
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~ 60 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP 60 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCS
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCC
Confidence 567899999863 3467899999999999998765
No 159
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=42.25 E-value=15 Score=26.70 Aligned_cols=35 Identities=23% Similarity=0.498 Sum_probs=28.0
Q ss_pred cccccccccccCCCCCcEEeCCCC---CccccccccCCC
Q 043301 30 DVVIICDICETSLQGPAYGCGTCE---FSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~---F~lH~~Ca~~p~ 65 (244)
+...+| .|+.+-.|..-.|..|+ --+|..|..+..
T Consensus 24 ~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~ 61 (90)
T 2jmi_A 24 QEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQ 61 (90)
T ss_dssp CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSS
T ss_pred CCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCc
Confidence 567899 89987778888999866 579999998643
No 160
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=42.10 E-value=20 Score=30.51 Aligned_cols=32 Identities=22% Similarity=0.687 Sum_probs=22.6
Q ss_pred ccccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 33 IICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 33 ~~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
..|..|+..- .+....|..|+-.+|..|...|
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PP 207 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 207 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CC
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCC
Confidence 3588887754 3567899999999999998744
No 161
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=41.78 E-value=17 Score=24.12 Aligned_cols=33 Identities=24% Similarity=0.642 Sum_probs=26.3
Q ss_pred CcccccccccCCCCeeEEcCC--cc-ceeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHE--CC-YNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~--Cd-~~lH~~Ca~~p 115 (244)
....| .|++.-.|....|.. |. --+|..|+.+.
T Consensus 9 e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~ 44 (60)
T 2vnf_A 9 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT 44 (60)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCC
Confidence 45677 899976788889999 54 47999999876
No 162
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=41.71 E-value=13 Score=24.68 Aligned_cols=35 Identities=26% Similarity=0.618 Sum_probs=27.2
Q ss_pred cccccccccccCCCCCcEEeCC--CC-CccccccccCCC
Q 043301 30 DVVIICDICETSLQGPAYGCGT--CE-FSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~--C~-F~lH~~Ca~~p~ 65 (244)
.+..+| .|+.+-.|..-.|.. |. --+|..|..+..
T Consensus 8 ~e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~ 45 (60)
T 2vnf_A 8 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTT 45 (60)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSS
T ss_pred CCCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCc
Confidence 456889 799877788889999 55 579999998643
No 163
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=41.43 E-value=16 Score=25.13 Aligned_cols=26 Identities=15% Similarity=0.372 Sum_probs=20.5
Q ss_pred ccccccccccCCCCCcEEeCCCCCccc
Q 043301 31 VVIICDICETSLQGPAYGCGTCEFSIH 57 (244)
Q Consensus 31 ~~~~C~~C~~~i~g~~Y~C~~C~F~lH 57 (244)
.+.+|..|+..+.-..|.| .|+-.++
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg~~FC 39 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKC-KCGSTFC 39 (64)
T ss_dssp CSCSCTTTCCCCTTSCEEC-TTSCEEC
T ss_pred cCCcChhhCCcccccCeEe-ecCCEec
Confidence 4578999999865558999 7987765
No 164
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=41.16 E-value=13 Score=25.96 Aligned_cols=33 Identities=18% Similarity=0.428 Sum_probs=27.2
Q ss_pred CcccccccccCC--CCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDEC--SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~--~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....| .|++.. .+....|..|+--+|..|+.+.
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~ 45 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIE 45 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCC
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcc
Confidence 35567 899864 5777899999999999999876
No 165
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=41.15 E-value=22 Score=23.58 Aligned_cols=13 Identities=23% Similarity=0.457 Sum_probs=9.8
Q ss_pred cccccccccCCCC
Q 043301 32 VIICDICETSLQG 44 (244)
Q Consensus 32 ~~~C~~C~~~i~g 44 (244)
...|..|+.+|.+
T Consensus 5 ~~~C~~C~~~I~~ 17 (72)
T 1x61_A 5 SSGCGGCGEDVVG 17 (72)
T ss_dssp CCCCSSSCSCCCS
T ss_pred CCCCccCCCccCC
Confidence 4578888888864
No 166
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=41.10 E-value=13 Score=24.63 Aligned_cols=35 Identities=26% Similarity=0.691 Sum_probs=27.8
Q ss_pred cccccccccccCCCCCcEEeCC--CCC-ccccccccCCC
Q 043301 30 DVVIICDICETSLQGPAYGCGT--CEF-SIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~--C~F-~lH~~Ca~~p~ 65 (244)
.+..+| .|+.+-.|..-.|.. |.. -+|..|..+..
T Consensus 7 ~e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~ 44 (59)
T 3c6w_A 7 NEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTT 44 (59)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSS
T ss_pred CCCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCccc
Confidence 467889 899987788889999 664 89999998643
No 167
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=40.93 E-value=9.1 Score=29.93 Aligned_cols=35 Identities=23% Similarity=0.566 Sum_probs=19.2
Q ss_pred CCCcceEeec-----CcccccccccCCC--------CeeEEcCCccce
Q 043301 72 HCHPLTLSKT-----NHHRCDACLDECS--------GMAYRCHECCYN 106 (244)
Q Consensus 72 H~H~L~L~~~-----~~~~Cd~Cg~~~~--------g~~Y~C~~Cd~~ 106 (244)
|.|.--|... ...||.-||..++ ...|.|..|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~ 55 (133)
T 3qt1_I 8 HHHSSGLVPRGSHMTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYV 55 (133)
T ss_dssp --------------CCCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCB
T ss_pred cccccccccCCccccCCeeCCCCCCEeeECccCCCceeEEECCCCCCc
Confidence 4555555544 5689999999742 236999999874
No 168
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=40.60 E-value=13 Score=25.61 Aligned_cols=33 Identities=21% Similarity=0.507 Sum_probs=27.0
Q ss_pred CcccccccccCCC-CeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECS-GMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~-g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....| .|++... ++...|..|+--+|..|+.+.
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~ 48 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGIS 48 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCC
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccc
Confidence 34567 8999755 477899999999999999876
No 169
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=40.43 E-value=13 Score=25.51 Aligned_cols=31 Identities=23% Similarity=0.720 Sum_probs=23.3
Q ss_pred cccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 34 ICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 34 ~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.|..|+..- .|....|..|+-.+|..|...|
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 51 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCC
Confidence 455666654 3467899999999999998744
No 170
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=40.43 E-value=21 Score=24.55 Aligned_cols=27 Identities=15% Similarity=0.469 Sum_probs=20.8
Q ss_pred cccccccccccCCCCCcEEeCCCCCccc
Q 043301 30 DVVIICDICETSLQGPAYGCGTCEFSIH 57 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~F~lH 57 (244)
..+.+|+.|+..+.-..|.| .|+..++
T Consensus 13 ~~~~rC~~C~kkvgl~~f~C-rCg~~FC 39 (64)
T 1wfh_A 13 QRPNRCTVCRKRVGLTGFMC-RCGTTFC 39 (64)
T ss_dssp SSCCCCTTTCCCCCTTCEEC-SSSCEEC
T ss_pred CcCCcChhhCCccCccCEEe-ecCCEec
Confidence 34578999999865568999 6987765
No 171
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=39.40 E-value=14 Score=26.11 Aligned_cols=50 Identities=22% Similarity=0.562 Sum_probs=30.0
Q ss_pred ccccCCC-C-CcEEeCCCCC----ccccccccCCCcCCCCCC-CCcceEeecCcccccccccC
Q 043301 37 ICETSLQ-G-PAYGCGTCEF----SIHKSCAELPLKIDHPFH-CHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 37 ~C~~~i~-g-~~Y~C~~C~F----~lH~~Ca~~p~~i~hp~H-~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
.|+.... | ..|+|.+|.+ .++..|.. ...| .|...+......-|--||..
T Consensus 6 ~Cg~vf~~ge~~Y~C~~C~~d~tc~lC~~CF~------~~~H~gH~~~~~~s~~gG~CDCGD~ 62 (75)
T 3ny3_A 6 LCGRVFKVGEPTYSCRDCAVDPTCVLCMECFL------GSIHRDHRYRMTTSGGGGFCDCGDT 62 (75)
T ss_dssp CCCCBCCTTCEEEEETTTBSSTTCCBCHHHHH------TSGGGGSCEEEEECCSCBBCCTTCT
T ss_pred ccCCcccCCCEEEECccCCCCCCeeEChHHCC------CCCcCCceEEEEEcCCCCEecCcCH
Confidence 4666652 3 6899999964 35555543 2235 67777765433445567764
No 172
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=38.84 E-value=21 Score=23.69 Aligned_cols=33 Identities=24% Similarity=0.622 Sum_probs=27.0
Q ss_pred CcccccccccCCCCeeEEcCC--ccc-eeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHE--CCY-NLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~--Cd~-~lH~~Ca~~p 115 (244)
....| .|++...|....|.. |.. -+|..|+.+.
T Consensus 8 e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~ 43 (59)
T 3c6w_A 8 EPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLT 43 (59)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcc
Confidence 46678 899976788889999 664 8999999876
No 173
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=38.77 E-value=19 Score=26.26 Aligned_cols=33 Identities=27% Similarity=0.544 Sum_probs=26.8
Q ss_pred CcccccccccCCCCeeEEcCCcc---ceeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHECC---YNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd---~~lH~~Ca~~p 115 (244)
....| .|++.-+|....|..|+ --+|..|+.+.
T Consensus 25 ~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~ 60 (90)
T 2jmi_A 25 EEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLK 60 (90)
T ss_dssp CSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCS
T ss_pred CCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCC
Confidence 46678 89987778777899876 57999999876
No 174
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=38.56 E-value=19 Score=25.46 Aligned_cols=27 Identities=15% Similarity=0.475 Sum_probs=21.2
Q ss_pred cccccccccccCCCCCcEEeCCCCCccc
Q 043301 30 DVVIICDICETSLQGPAYGCGTCEFSIH 57 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~F~lH 57 (244)
....+|..|+..+.-..|.| .|+..++
T Consensus 23 ~~~~RC~~C~kkvgL~~f~C-rCg~~FC 49 (74)
T 1wfp_A 23 STATRCLSCNKKVGVTGFKC-RCGSTFC 49 (74)
T ss_dssp CCCCBCSSSCCBCTTTCEEC-TTSCEEC
T ss_pred ccCccchhhcCcccccceEe-ccCCEec
Confidence 34578999999876568999 7987664
No 175
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=38.49 E-value=12 Score=31.83 Aligned_cols=31 Identities=35% Similarity=0.845 Sum_probs=26.7
Q ss_pred ccccccccccCCCCCcEEeCCCCCcccccccc
Q 043301 31 VVIICDICETSLQGPAYGCGTCEFSIHKSCAE 62 (244)
Q Consensus 31 ~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~Ca~ 62 (244)
.-..|.+|...+. .+..|..|+-.+|..|..
T Consensus 179 ~i~~C~iC~~iv~-~g~~C~~C~~~~H~~C~~ 209 (238)
T 3nw0_A 179 AVKICNICHSLLI-QGQSCETCGIRMHLPCVA 209 (238)
T ss_dssp TCCBCTTTCSBCS-SCEECSSSCCEECHHHHH
T ss_pred CCCcCcchhhHHh-CCcccCccChHHHHHHHH
Confidence 3568999988875 579999999999999986
No 176
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=38.46 E-value=21 Score=25.08 Aligned_cols=55 Identities=20% Similarity=0.429 Sum_probs=36.7
Q ss_pred cccccccccccCCC--CCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccCC
Q 043301 30 DVVIICDICETSLQ--GPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDEC 93 (244)
Q Consensus 30 ~~~~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~~ 93 (244)
.....|..|+.... .-.++|..|+.+++..|...-..+. .. ......|+.|-..+
T Consensus 17 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~--~~-------~~~~RVC~~C~~~l 73 (82)
T 2yw8_A 17 DEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALP--SY-------PKPVRVCDSCHTLL 73 (82)
T ss_dssp CCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCT--TC-------SSCEEECHHHHHHT
T ss_pred ccCCcccCcCCcccCccccccCCCCCCEEChHHhCCeeecC--CC-------CCcCEECHHHHHHH
Confidence 34568999998753 3469999999999999987422221 10 11346788886644
No 177
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=37.00 E-value=22 Score=24.55 Aligned_cols=33 Identities=24% Similarity=0.662 Sum_probs=27.0
Q ss_pred CcccccccccCCCCeeEEcCC--ccc-eeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHE--CCY-NLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~--Cd~-~lH~~Ca~~p 115 (244)
....| .|++.-.|....|.. |.. -+|..|+.+.
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~ 50 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT 50 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCS
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcC
Confidence 46788 799976788889998 664 7999999876
No 178
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=36.59 E-value=10 Score=27.39 Aligned_cols=50 Identities=26% Similarity=0.682 Sum_probs=36.0
Q ss_pred cccccccccccCC---CCCcEEeCCCCCccccccccCCCcCCCCCCCCcceEeecCcccccccccC
Q 043301 30 DVVIICDICETSL---QGPAYGCGTCEFSIHKSCAELPLKIDHPFHCHPLTLSKTNHHRCDACLDE 92 (244)
Q Consensus 30 ~~~~~C~~C~~~i---~g~~Y~C~~C~F~lH~~Ca~~p~~i~hp~H~H~L~L~~~~~~~Cd~Cg~~ 92 (244)
+....|..|+... .+....|..|+-.+|..|...+. + +.+..+|..|...
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~-v------------P~g~W~C~~C~~~ 75 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-I------------PEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS-C------------CSSCCCCHHHHHH
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc-c------------CCCceECccccCc
Confidence 3457899999864 23678999999999999987642 1 1246677777553
No 179
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=36.37 E-value=10 Score=24.92 Aligned_cols=7 Identities=43% Similarity=1.023 Sum_probs=3.6
Q ss_pred EEcCCcc
Q 043301 98 YRCHECC 104 (244)
Q Consensus 98 Y~C~~Cd 104 (244)
|.|..|+
T Consensus 33 ~~C~~C~ 39 (60)
T 4gzn_C 33 RSCPECG 39 (60)
T ss_dssp EECTTTC
T ss_pred eECCCCC
Confidence 5555554
No 180
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=36.24 E-value=23 Score=25.43 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=26.9
Q ss_pred ccccccccccCCC--CCcEEeCCCCCccccccccC
Q 043301 31 VVIICDICETSLQ--GPAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 31 ~~~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~ 63 (244)
....|..|+.... .-.++|..|+.+++..|...
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCC
Confidence 3467999998753 24699999999999999874
No 181
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=36.02 E-value=22 Score=29.10 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=26.2
Q ss_pred cccccccccCC-----CCeeEEcCCccceeccccccCc
Q 043301 83 HHRCDACLDEC-----SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 83 ~~~Cd~Cg~~~-----~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
...|.+|++.- .+....|..|+.-+|..|+.+.
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~ 39 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLS 39 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCC
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccC
Confidence 34699999853 2346799999999999999876
No 182
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=35.95 E-value=28 Score=23.54 Aligned_cols=34 Identities=24% Similarity=0.747 Sum_probs=28.0
Q ss_pred cccccccccccCC-CCCcEEeC--CCCCccccccccCC
Q 043301 30 DVVIICDICETSL-QGPAYGCG--TCEFSIHKSCAELP 64 (244)
Q Consensus 30 ~~~~~C~~C~~~i-~g~~Y~C~--~C~F~lH~~Ca~~p 64 (244)
++..+| .|+... .|+.-+|. .|..-+|..|..+.
T Consensus 8 e~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~ 44 (68)
T 2rsd_A 8 EAKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIP 44 (68)
T ss_dssp SCEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCC
T ss_pred CCCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCC
Confidence 556889 698876 57889998 59999999998764
No 183
>3nis_A E3 ubiquitin-protein ligase UBR1; E3 ubiquitin ligase, UBR BOX, zinc-binding protein, N-END RU ligase, metal binding protein; 1.68A {Saccharomyces cerevisiae} PDB: 3nii_A 3nij_A 3nih_A 3nik_A 3nim_A 3nin_A 3nil_A 3nit_A
Probab=35.92 E-value=29 Score=24.81 Aligned_cols=51 Identities=25% Similarity=0.486 Sum_probs=29.4
Q ss_pred ccccCCC-C-CcEEeCCCCCc----cccccccCCCcCCCCCCCCcceEeec--CcccccccccC
Q 043301 37 ICETSLQ-G-PAYGCGTCEFS----IHKSCAELPLKIDHPFHCHPLTLSKT--NHHRCDACLDE 92 (244)
Q Consensus 37 ~C~~~i~-g-~~Y~C~~C~F~----lH~~Ca~~p~~i~hp~H~H~L~L~~~--~~~~Cd~Cg~~ 92 (244)
.|+.... | ..|+|..|.++ |+..|.. .-+|. .|...+... ...-|--||..
T Consensus 10 ~Cg~vf~~ge~~Y~C~~C~~d~tcvlC~~CF~---~s~H~--gH~~~~~~s~~~~gG~CDCGD~ 68 (82)
T 3nis_A 10 NCGRKFKIGEPLYRCHECGCDDTCVLCIHCFN---PKDHV--NHHVCTDICTEFTSGICDCGDE 68 (82)
T ss_dssp CCCCBCCTTCEEEEETTTBSSTTCCBCTTTCC---GGGGT--TSCEEEEECCSSEEEBCCTTCG
T ss_pred CCCCcccCCCEEEEeeccCCCCCceEchhhCC---CCCcC--CceEEEEEecCCCCcEecCCCH
Confidence 4666652 3 68999999653 5555543 22333 676666543 24455567764
No 184
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=35.92 E-value=16 Score=29.99 Aligned_cols=31 Identities=26% Similarity=0.820 Sum_probs=25.5
Q ss_pred ccccccccCCC-C----CcEEeCCCCCccccccccC
Q 043301 33 IICDICETSLQ-G----PAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 33 ~~C~~C~~~i~-g----~~Y~C~~C~F~lH~~Ca~~ 63 (244)
.+|..|+.+.. + ..-+|..|+.-+|..|...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi 38 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENL 38 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhcccc
Confidence 47999998863 2 3679999999999999875
No 185
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=34.99 E-value=29 Score=24.44 Aligned_cols=34 Identities=15% Similarity=0.455 Sum_probs=27.5
Q ss_pred cccccccccccCCC--CCcEEeCCCCCccccccccC
Q 043301 30 DVVIICDICETSLQ--GPAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 30 ~~~~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~ 63 (244)
.....|..|+.... .-.++|..|+-+++..|...
T Consensus 19 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 19 EDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp TTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred CCCCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 34568999998853 34699999999999999874
No 186
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=34.25 E-value=24 Score=26.16 Aligned_cols=32 Identities=22% Similarity=0.649 Sum_probs=27.4
Q ss_pred ccccccccCC--CCCcEEeC-CCCCccccccccCC
Q 043301 33 IICDICETSL--QGPAYGCG-TCEFSIHKSCAELP 64 (244)
Q Consensus 33 ~~C~~C~~~i--~g~~Y~C~-~C~F~lH~~Ca~~p 64 (244)
..|..|+.+. .+..-+|. .|.--+|..|..+.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt 38 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMT 38 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCC
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcC
Confidence 5799999995 46788998 99999999999864
No 187
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=33.94 E-value=14 Score=29.45 Aligned_cols=33 Identities=21% Similarity=0.450 Sum_probs=27.4
Q ss_pred CcccccccccCC--CCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDEC--SGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~--~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....| .|++.. .|....|..|+-..|..|+.+.
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~ 41 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGIL 41 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCC
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCc
Confidence 45688 999864 5678999999999999999765
No 188
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=33.74 E-value=17 Score=24.71 Aligned_cols=34 Identities=26% Similarity=0.637 Sum_probs=27.2
Q ss_pred ccccccccccCCC--CCcEEeC-CCCCccccccccCC
Q 043301 31 VVIICDICETSLQ--GPAYGCG-TCEFSIHKSCAELP 64 (244)
Q Consensus 31 ~~~~C~~C~~~i~--g~~Y~C~-~C~F~lH~~Ca~~p 64 (244)
....|..|+.+.. .+.-+|. .|+--+|..|..+.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt 43 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMT 43 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCC
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCC
Confidence 3468999999974 3567999 99999999999864
No 189
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.52 E-value=26 Score=23.22 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=10.3
Q ss_pred cccccccccCCCC
Q 043301 32 VIICDICETSLQG 44 (244)
Q Consensus 32 ~~~C~~C~~~i~g 44 (244)
...|..|+.+|.+
T Consensus 5 ~~~C~~C~~~I~~ 17 (72)
T 1x4l_A 5 SSGCAGCTNPISG 17 (72)
T ss_dssp SCSBTTTTBCCCC
T ss_pred CCCCcCCCccccC
Confidence 4579999998875
No 190
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=32.66 E-value=25 Score=26.26 Aligned_cols=31 Identities=29% Similarity=0.615 Sum_probs=24.2
Q ss_pred cccccccCC-CCCcEEeCCCCCccccccccCC
Q 043301 34 ICDICETSL-QGPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 34 ~C~~C~~~i-~g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.|..|+... .+....|..|+-.+|..|...|
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~pp 91 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPP 91 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSC
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCC
Confidence 466666654 3568999999999999998743
No 191
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=32.41 E-value=28 Score=23.83 Aligned_cols=29 Identities=24% Similarity=0.584 Sum_probs=22.3
Q ss_pred cccccccCC-CCeeEEcCCccceecccccc
Q 043301 85 RCDACLDEC-SGMAYRCHECCYNLHYHCTA 113 (244)
Q Consensus 85 ~Cd~Cg~~~-~g~~Y~C~~Cd~~lH~~Ca~ 113 (244)
.|.+||+.. .+....|..|+-.+|..|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~ 49 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLD 49 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCC
Confidence 466677642 45678899999999999986
No 192
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=32.20 E-value=20 Score=27.27 Aligned_cols=26 Identities=19% Similarity=0.595 Sum_probs=20.0
Q ss_pred cccccccccCCC--------CeeEEcCCccceec
Q 043301 83 HHRCDACLDECS--------GMAYRCHECCYNLH 108 (244)
Q Consensus 83 ~~~Cd~Cg~~~~--------g~~Y~C~~Cd~~lH 108 (244)
..||..||..++ +..|.|..|++...
T Consensus 4 ~~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 4 FRFCRDCNNMLYPREDKENNRLLFECRTCSYVEE 37 (122)
T ss_dssp CCBCSSSCCBCEEEEETTTTEEEEECSSSSCEEE
T ss_pred CCcccccCccCcccccCcCCCCEEECCcCCCeee
Confidence 468999999765 35799999987554
No 193
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=31.85 E-value=19 Score=24.80 Aligned_cols=35 Identities=23% Similarity=0.544 Sum_probs=27.7
Q ss_pred cccccccccccCC--CCCcEEeCCCCCccccccccCCC
Q 043301 30 DVVIICDICETSL--QGPAYGCGTCEFSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i--~g~~Y~C~~C~F~lH~~Ca~~p~ 65 (244)
....+| .|+.+- .++.-+|..|.--+|..|..+..
T Consensus 8 ~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~ 44 (75)
T 3kqi_A 8 TVPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEE 44 (75)
T ss_dssp CCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCT
T ss_pred CCeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccc
Confidence 456778 788875 35789999999999999998643
No 194
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=31.83 E-value=26 Score=24.00 Aligned_cols=31 Identities=16% Similarity=0.350 Sum_probs=25.5
Q ss_pred ccccccccCCC--CCcEEeCCCCCccccccccC
Q 043301 33 IICDICETSLQ--GPAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 33 ~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~ 63 (244)
..|..|+.... .-.++|..|+.+++..|...
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 47999998753 34699999999999999863
No 195
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=31.07 E-value=34 Score=21.75 Aligned_cols=28 Identities=25% Similarity=0.742 Sum_probs=23.5
Q ss_pred ccccCCCC-eeEEcCCccceeccccccCc
Q 043301 88 ACLDECSG-MAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 88 ~Cg~~~~g-~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
.|++...| +.-.|..|+.-.|..|+.+.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~ 36 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIR 36 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCC
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCC
Confidence 57876544 77899999999999999877
No 196
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=30.92 E-value=16 Score=31.05 Aligned_cols=31 Identities=23% Similarity=0.550 Sum_probs=26.4
Q ss_pred cccccccccCCCCeeEEcCCccceeccccccC
Q 043301 83 HHRCDACLDECSGMAYRCHECCYNLHYHCTAL 114 (244)
Q Consensus 83 ~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~ 114 (244)
...|.+|.+.+. .+.+|..|+..+|..|+..
T Consensus 180 i~~C~iC~~iv~-~g~~C~~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 180 VKICNICHSLLI-QGQSCETCGIRMHLPCVAK 210 (238)
T ss_dssp CCBCTTTCSBCS-SCEECSSSCCEECHHHHHH
T ss_pred CCcCcchhhHHh-CCcccCccChHHHHHHHHH
Confidence 568999999754 4699999999999999954
No 197
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=30.63 E-value=37 Score=26.90 Aligned_cols=22 Identities=18% Similarity=0.464 Sum_probs=14.0
Q ss_pred cccccccCCCCeeEEcCCccce
Q 043301 85 RCDACLDECSGMAYRCHECCYN 106 (244)
Q Consensus 85 ~Cd~Cg~~~~g~~Y~C~~Cd~~ 106 (244)
.|.+|+.....-+++|..|++-
T Consensus 103 ~CgiCR~G~~~~ffHC~~C~~C 124 (143)
T 2dkt_A 103 SCGICRIGPKEDFFHCLKCNLC 124 (143)
T ss_dssp TTTEEEESCGGGEEEETTTTEE
T ss_pred CCCceeccCCcCcEECCcCCee
Confidence 3444544444557999999763
No 198
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.35 E-value=29 Score=25.03 Aligned_cols=33 Identities=21% Similarity=0.426 Sum_probs=26.8
Q ss_pred CcccccccccCC-CCeeEEcCCccceeccccccC
Q 043301 82 NHHRCDACLDEC-SGMAYRCHECCYNLHYHCTAL 114 (244)
Q Consensus 82 ~~~~Cd~Cg~~~-~g~~Y~C~~Cd~~lH~~Ca~~ 114 (244)
....|.+|+... .+....|..|+-.+|..|..-
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~P 48 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLP 48 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSS
T ss_pred CCCCCccCCCcCCCCCEEEcCCCCchhccccCCC
Confidence 456799999864 356789999999999999963
No 199
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=30.32 E-value=17 Score=25.66 Aligned_cols=26 Identities=15% Similarity=0.397 Sum_probs=19.9
Q ss_pred ccccccccccCCCCCcEEeCCCCCccc
Q 043301 31 VVIICDICETSLQGPAYGCGTCEFSIH 57 (244)
Q Consensus 31 ~~~~C~~C~~~i~g~~Y~C~~C~F~lH 57 (244)
...+|..|+..+.-.+|.|. |+..++
T Consensus 24 ~~nRC~~CrKkvgL~gf~Cr-Cg~~FC 49 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCR-CGNLFC 49 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECT-TSCEEC
T ss_pred cCCcChhhCCcccccCeecC-CCCEec
Confidence 34689999998755689999 985553
No 200
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=30.27 E-value=21 Score=25.12 Aligned_cols=31 Identities=23% Similarity=0.732 Sum_probs=21.4
Q ss_pred cccccccCCC-CCcEEeCCCCCccccccccCC
Q 043301 34 ICDICETSLQ-GPAYGCGTCEFSIHKSCAELP 64 (244)
Q Consensus 34 ~C~~C~~~i~-g~~Y~C~~C~F~lH~~Ca~~p 64 (244)
.|..|+.... +....|..|+-.+|..|...|
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 59 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSC
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCc
Confidence 3444444432 357889999999999998754
No 201
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=30.20 E-value=9.6 Score=29.70 Aligned_cols=25 Identities=12% Similarity=0.259 Sum_probs=14.6
Q ss_pred cCCCCChhhhhhhhhhcCCCCccceeEEEEe
Q 043301 204 ESYPYSDDTLAQFILRLQNSLRSKNMSVEFW 234 (244)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (244)
+.+|.||+ .|.-.+.+ -|.|.|-|.
T Consensus 53 T~~P~Wne---~Fd~~V~~---Gr~l~i~Vf 77 (126)
T 1yrk_A 53 TMYPEWKS---TFDAHIYE---GRVIQIVLM 77 (126)
T ss_dssp CBCCCTTC---EEEEECCT---TCEEEEEEE
T ss_pred CCCcCccc---eEEeeeeC---CEEEEEEEE
Confidence 44788887 57544433 356666554
No 202
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.14 E-value=49 Score=21.68 Aligned_cols=11 Identities=18% Similarity=0.540 Sum_probs=8.9
Q ss_pred ccccccccCCC
Q 043301 33 IICDICETSLQ 43 (244)
Q Consensus 33 ~~C~~C~~~i~ 43 (244)
..|..|+.+|.
T Consensus 6 ~~C~~C~~~I~ 16 (72)
T 1wyh_A 6 SGCSACGETVM 16 (72)
T ss_dssp CBCSSSCCBCC
T ss_pred CCCccCCCccc
Confidence 57888888886
No 203
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.86 E-value=26 Score=24.03 Aligned_cols=35 Identities=23% Similarity=0.398 Sum_probs=27.8
Q ss_pred cccccccccccCCCCCcEEeCCCC---CccccccccCCC
Q 043301 30 DVVIICDICETSLQGPAYGCGTCE---FSIHKSCAELPL 65 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g~~Y~C~~C~---F~lH~~Ca~~p~ 65 (244)
.+..+|. |...-.|..-.|..|+ --+|..|..+..
T Consensus 4 ~~~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~ 41 (70)
T 1x4i_A 4 GSSGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLTE 41 (70)
T ss_dssp SCCCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCSS
T ss_pred CCCeEEE-cCCCCCCCEeEeCCCCCCccCCcccccccCc
Confidence 4567885 8887778889999975 679999998644
No 204
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.53 E-value=38 Score=23.68 Aligned_cols=30 Identities=27% Similarity=0.597 Sum_probs=22.1
Q ss_pred cccccccC-CCCeeEEcCCccceeccccccC
Q 043301 85 RCDACLDE-CSGMAYRCHECCYNLHYHCTAL 114 (244)
Q Consensus 85 ~Cd~Cg~~-~~g~~Y~C~~Cd~~lH~~Ca~~ 114 (244)
.|.+|++. -.+....|..|+-.+|..|..-
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~P 58 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNP 58 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSS
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCC
Confidence 46667764 2345678999999999999863
No 205
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=29.07 E-value=28 Score=21.08 Aligned_cols=7 Identities=43% Similarity=1.265 Sum_probs=3.8
Q ss_pred EEcCCcc
Q 043301 98 YRCHECC 104 (244)
Q Consensus 98 Y~C~~Cd 104 (244)
|.|..|+
T Consensus 30 ~~C~~C~ 36 (57)
T 1bbo_A 30 YHCTYCN 36 (57)
T ss_dssp EECSSSS
T ss_pred ccCCCCC
Confidence 5555554
No 206
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=28.87 E-value=39 Score=24.14 Aligned_cols=34 Identities=21% Similarity=0.579 Sum_probs=27.2
Q ss_pred cccccccccccCCC--CCcEEeCCCCCccccccccC
Q 043301 30 DVVIICDICETSLQ--GPAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 30 ~~~~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~ 63 (244)
.....|..|+.... .-..+|..|+.+++..|...
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred CcCCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 34568999998753 34699999999999999864
No 207
>2gm5_A Transposon gamma-delta resolvase; site specific recombination, recombin; 2.10A {Escherichia coli} PDB: 2rsl_A 1gdr_A 1ght_A 1hx7_A
Probab=28.84 E-value=24 Score=26.94 Aligned_cols=24 Identities=8% Similarity=0.102 Sum_probs=18.8
Q ss_pred hhhhhcCCCCccceeEEEEeccCcccccC
Q 043301 215 QFILRLQNSLRSKNMSVEFWDLDDVLVNV 243 (244)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (244)
.++-.++++| .|-||++||.+||+
T Consensus 49 ~ll~~~~~gd-----~lvV~~ldRL~R~~ 72 (139)
T 2gm5_A 49 LLRMKVKEGD-----VILVKKLDHLGRDT 72 (139)
T ss_dssp HHHHHCCTTC-----EEEESSGGGTSSSH
T ss_pred HHHHHHHCCC-----EEEEEecccccCCH
Confidence 3555677774 68899999999985
No 208
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=28.40 E-value=22 Score=26.12 Aligned_cols=60 Identities=20% Similarity=0.494 Sum_probs=37.3
Q ss_pred cEEeCCCC---CccccccccCCCcCCCCCCCCcceEeec--CcccccccccCC---CCe-eEEcCCccceeccccccCc
Q 043301 46 AYGCGTCE---FSIHKSCAELPLKIDHPFHCHPLTLSKT--NHHRCDACLDEC---SGM-AYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 46 ~Y~C~~C~---F~lH~~Ca~~p~~i~hp~H~H~L~L~~~--~~~~Cd~Cg~~~---~g~-~Y~C~~Cd~~lH~~Ca~~p 115 (244)
.|.|.+|+ |...+.|.+ +.|+++-+.. --+.|. |+... ..+ .-.|..|+-..=.++++..
T Consensus 15 av~C~~C~yt~~~~~~~C~~---------~~H~l~~~~a~KRFFkC~-C~~Rt~sl~r~P~~~C~~Cg~~~wer~~M~~ 83 (92)
T 2kwq_A 15 VVTCKTCKYTHFKPKETCVS---------ENHDFHWHNGVKRFFKCP-CGNRTISLDRLPKKHCSTCGLFKWERVGMLK 83 (92)
T ss_dssp EEEETTTCCEESSCCHHHHH---------TTCCEEEEEEECEEEECT-TSCEEEESSSSCCSCCTTTCSCCCEEECCCS
T ss_pred EEEccCCcceecCcchhHHh---------cCCceEEEeeeEEEEECC-CCCceeEeeeCCCCCCCCCCCCceEEeeccc
Confidence 69999997 566777765 5788877765 456786 88752 111 2356666544444444443
No 209
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=28.00 E-value=34 Score=24.75 Aligned_cols=27 Identities=15% Similarity=0.484 Sum_probs=20.2
Q ss_pred cccccccccccCCCC-CcEEeCCCCCccc
Q 043301 30 DVVIICDICETSLQG-PAYGCGTCEFSIH 57 (244)
Q Consensus 30 ~~~~~C~~C~~~i~g-~~Y~C~~C~F~lH 57 (244)
....+|..|+..+.- ..|.|. |+..++
T Consensus 23 ~~~~rC~~C~kkvgl~~~f~Cr-Cg~~FC 50 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLATSFECR-CGNNFC 50 (85)
T ss_dssp CCCCBCSSSCCBCSSSSCEECT-TCCEEC
T ss_pred ccCccchhhCCeecccCCeEcC-CCCEec
Confidence 345789999998643 389996 987765
No 210
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=27.45 E-value=35 Score=25.98 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=27.6
Q ss_pred CcccccccccCCCC--eeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECSG--MAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g--~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
....|..|+..+.- ...+|..|+-.++..|....
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~ 103 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 103 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhCCc
Confidence 35689999997643 35999999999999998755
No 211
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.49 E-value=34 Score=22.97 Aligned_cols=12 Identities=25% Similarity=0.648 Sum_probs=9.6
Q ss_pred ccccccccCCCC
Q 043301 33 IICDICETSLQG 44 (244)
Q Consensus 33 ~~C~~C~~~i~g 44 (244)
..|..|+.+|.+
T Consensus 6 ~~C~~C~~~I~~ 17 (76)
T 1x68_A 6 SGCVACSKPISG 17 (76)
T ss_dssp CCCTTTCCCCCT
T ss_pred CCCccCCCcccC
Confidence 478889888875
No 212
>1gdt_A GD resolvase, protein (gamma delta resolvase); protein-DNA complex, double helix, overhanging base, DNA binding protein/DNA complex; 3.00A {Escherichia coli} SCOP: a.4.1.2 c.53.1.1 PDB: 1zr4_A 1zr2_A 2gm4_A 1res_A 1ret_A
Probab=26.35 E-value=28 Score=27.59 Aligned_cols=24 Identities=8% Similarity=0.095 Sum_probs=18.8
Q ss_pred hhhhhcCCCCccceeEEEEeccCcccccC
Q 043301 215 QFILRLQNSLRSKNMSVEFWDLDDVLVNV 243 (244)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (244)
.++-.++++| .|-||++||.+||+
T Consensus 50 ~ll~~~~~gd-----~lvv~~ldRl~R~~ 73 (183)
T 1gdt_A 50 LLRMKVEEGD-----VILVKKLDRLGRDT 73 (183)
T ss_dssp HHHHHCCTTC-----EEEESSGGGTCSSH
T ss_pred HHHhcCCCCC-----EEEEEecccccCCH
Confidence 3555677774 68899999999985
No 213
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.97 E-value=1.5e+02 Score=19.76 Aligned_cols=12 Identities=25% Similarity=0.606 Sum_probs=7.6
Q ss_pred ccccccccCCCC
Q 043301 84 HRCDACLDECSG 95 (244)
Q Consensus 84 ~~Cd~Cg~~~~g 95 (244)
+.|..|++.+.+
T Consensus 44 F~C~~C~~~L~~ 55 (82)
T 2ehe_A 44 FRCCRCQRSLAD 55 (82)
T ss_dssp SBCTTTCCBCSS
T ss_pred CeecCCCCccCC
Confidence 457777776554
No 214
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=25.73 E-value=31 Score=22.47 Aligned_cols=15 Identities=13% Similarity=0.490 Sum_probs=10.9
Q ss_pred ccccccccccCCCCC
Q 043301 31 VVIICDICETSLQGP 45 (244)
Q Consensus 31 ~~~~C~~C~~~i~g~ 45 (244)
....|..|+..|.+.
T Consensus 10 ~~~~C~~C~~~i~~~ 24 (72)
T 3f6q_B 10 ASATCERCKGGFAPA 24 (72)
T ss_dssp TTCBCTTTCCBCCTT
T ss_pred CCccchhcCccccCC
Confidence 345899999988643
No 215
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=24.22 E-value=17 Score=26.42 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=29.5
Q ss_pred CcccccccccCCCCeeEEcCCccceeccccccCc
Q 043301 82 NHHRCDACLDECSGMAYRCHECCYNLHYHCTALK 115 (244)
Q Consensus 82 ~~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p 115 (244)
+...|.+|..--.+..|.|..|.-..|..|..-+
T Consensus 14 ~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 14 NDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCcccCccccccccceeccccccccccHhhcccc
Confidence 4678999998777778999999999999998765
No 216
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=24.10 E-value=30 Score=20.89 Aligned_cols=10 Identities=20% Similarity=0.441 Sum_probs=4.5
Q ss_pred cccccccccC
Q 043301 32 VIICDICETS 41 (244)
Q Consensus 32 ~~~C~~C~~~ 41 (244)
++.|..|+..
T Consensus 4 ~~~C~~C~~~ 13 (57)
T 3uk3_C 4 SRECSYCGKF 13 (57)
T ss_dssp -CBCTTTCCB
T ss_pred CccCCCCcch
Confidence 3445555543
No 217
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=23.97 E-value=27 Score=23.36 Aligned_cols=12 Identities=25% Similarity=0.708 Sum_probs=7.8
Q ss_pred ccccccccCCCC
Q 043301 33 IICDICETSLQG 44 (244)
Q Consensus 33 ~~C~~C~~~i~g 44 (244)
..|.+|+.+|.+
T Consensus 16 ~~C~~C~~~I~~ 27 (77)
T 2egq_A 16 KKCAGCKNPITG 27 (77)
T ss_dssp CCCSSSCCCCCC
T ss_pred ccCcccCCcccC
Confidence 467777777654
No 218
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=23.95 E-value=41 Score=27.82 Aligned_cols=32 Identities=16% Similarity=0.453 Sum_probs=26.2
Q ss_pred cccccccccCCC--CCcEEeCCCCCccccccccC
Q 043301 32 VIICDICETSLQ--GPAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 32 ~~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~ 63 (244)
...|..|+.... .-..+|..|+.+++..|...
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCC
Confidence 368999988753 34699999999999999864
No 219
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=23.91 E-value=37 Score=28.42 Aligned_cols=31 Identities=16% Similarity=0.410 Sum_probs=25.7
Q ss_pred ccccccccCCC--CCcEEeCCCCCccccccccC
Q 043301 33 IICDICETSLQ--GPAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 33 ~~C~~C~~~i~--g~~Y~C~~C~F~lH~~Ca~~ 63 (244)
..|..|+.... .-.++|..|+.+++..|...
T Consensus 165 ~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 165 EECHRCRVQFGVMTRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECTTTCCE
T ss_pred CCCcCcCCCCCccccccccCCCcCEeChhhcCC
Confidence 58999988753 24699999999999999864
No 220
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=23.86 E-value=31 Score=26.80 Aligned_cols=39 Identities=21% Similarity=0.405 Sum_probs=20.4
Q ss_pred CCCEeeeeccCCCcccccccccccCC--C-C-----CcEEeCCCCCcc
Q 043301 17 HYLIFNENEVGHDDVVIICDICETSL--Q-G-----PAYGCGTCEFSI 56 (244)
Q Consensus 17 H~L~L~~~~~~~~~~~~~C~~C~~~i--~-g-----~~Y~C~~C~F~l 56 (244)
|.--| +.....-.+-.||.-|+... . + ..|.|..|+|..
T Consensus 10 ~~~~~-~~~~~~~~~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~~ 56 (133)
T 3qt1_I 10 HSSGL-VPRGSHMTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVE 56 (133)
T ss_dssp -------------CCCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCBC
T ss_pred ccccc-ccCCccccCCeeCCCCCCEeeECccCCCceeEEECCCCCCcE
Confidence 55445 33333234567999999876 2 1 369999999854
No 221
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=23.76 E-value=49 Score=26.47 Aligned_cols=29 Identities=24% Similarity=0.682 Sum_probs=23.9
Q ss_pred cccccccccCCCCeeEEcCCccceecccccc
Q 043301 83 HHRCDACLDECSGMAYRCHECCYNLHYHCTA 113 (244)
Q Consensus 83 ~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH~~Ca~ 113 (244)
...|.+|+.. |-..-|..|+-..|..|..
T Consensus 4 ~~~C~~C~~~--g~ll~Cd~C~~~~H~~C~~ 32 (184)
T 3o36_A 4 EDWCAVCQNG--GELLCCEKCPKVFHLSCHV 32 (184)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECTTTSS
T ss_pred CCccccCCCC--CeeeecCCCCcccCccccC
Confidence 4579999975 4478899999999999974
No 222
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.66 E-value=43 Score=22.26 Aligned_cols=23 Identities=30% Similarity=0.677 Sum_probs=17.7
Q ss_pred cccccccccCCCCeeEEcCCccceec
Q 043301 83 HHRCDACLDECSGMAYRCHECCYNLH 108 (244)
Q Consensus 83 ~~~Cd~Cg~~~~g~~Y~C~~Cd~~lH 108 (244)
...|.+|+. ...|+|..|....+
T Consensus 12 ~~~C~vC~~---~~kY~CPrC~~~yC 34 (56)
T 2yqq_A 12 TVVCVICLE---KPKYRCPACRVPYC 34 (56)
T ss_dssp CCCCTTTCS---CCSEECTTTCCEES
T ss_pred CCccCcCcC---CCeeeCCCCCCCee
Confidence 457999998 45699999986554
No 223
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=23.51 E-value=38 Score=20.74 Aligned_cols=7 Identities=43% Similarity=1.137 Sum_probs=4.0
Q ss_pred EEcCCcc
Q 043301 98 YRCHECC 104 (244)
Q Consensus 98 Y~C~~Cd 104 (244)
|.|..|+
T Consensus 31 ~~C~~C~ 37 (60)
T 2adr_A 31 YPCGLCN 37 (60)
T ss_dssp EECTTTC
T ss_pred ccCCCCC
Confidence 5565554
No 224
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.78 E-value=42 Score=21.98 Aligned_cols=11 Identities=18% Similarity=0.591 Sum_probs=8.6
Q ss_pred ccccccccCCC
Q 043301 33 IICDICETSLQ 43 (244)
Q Consensus 33 ~~C~~C~~~i~ 43 (244)
..|..|+.+|.
T Consensus 6 ~~C~~C~~~I~ 16 (72)
T 1x4k_A 6 SGCQECKKTIM 16 (72)
T ss_dssp CCBSSSCCCCC
T ss_pred CCCccCCCccc
Confidence 47888888885
No 225
>2r0q_C Putative transposon TN552 DNA-invertase BIN3; site-specific recombinase, resolvase, DNA-binding protein, protein-DNA complex, DNA integration, DNA invertase, DNA recombination; 3.20A {Staphylococcus aureus}
Probab=22.61 E-value=36 Score=27.56 Aligned_cols=25 Identities=8% Similarity=-0.105 Sum_probs=19.2
Q ss_pred hhhhhhcCCCCccceeEEEEeccCcccccC
Q 043301 214 AQFILRLQNSLRSKNMSVEFWDLDDVLVNV 243 (244)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (244)
..++-.++++| .|-||++||.+||+
T Consensus 47 ~~ll~~~~~gd-----~lvv~~ldRL~R~~ 71 (209)
T 2r0q_C 47 QKALNFVRMGD-----RFIVESIDRLGRNY 71 (209)
T ss_dssp HHHHHHCCTTC-----EEEESSGGGGCSSH
T ss_pred HHHHHHhhCCC-----EEEEeecccccCCH
Confidence 34555677774 48899999999985
No 226
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=22.05 E-value=42 Score=25.60 Aligned_cols=33 Identities=15% Similarity=0.438 Sum_probs=25.5
Q ss_pred ccccccccccCCCC--CcEEeCCCCCccccccccC
Q 043301 31 VVIICDICETSLQG--PAYGCGTCEFSIHKSCAEL 63 (244)
Q Consensus 31 ~~~~C~~C~~~i~g--~~Y~C~~C~F~lH~~Ca~~ 63 (244)
....|..|+...+- -..+|..|+.+++..|...
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~ 52 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQ 52 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC
T ss_pred ccCcccCcCCccccccccccCCCCCCeeCHHHhCC
Confidence 34589999987532 3699999999999999764
No 227
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=22.03 E-value=70 Score=20.24 Aligned_cols=31 Identities=19% Similarity=0.463 Sum_probs=24.4
Q ss_pred cccccccCC--CCeeEEcC-CccceeccccccCc
Q 043301 85 RCDACLDEC--SGMAYRCH-ECCYNLHYHCTALK 115 (244)
Q Consensus 85 ~Cd~Cg~~~--~g~~Y~C~-~Cd~~lH~~Ca~~p 115 (244)
.|..|++.. .+....|. .|+--+|..|+.+.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~ 37 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVS 37 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCC
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCC
Confidence 466788864 34567999 89999999999876
No 228
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=21.32 E-value=76 Score=23.41 Aligned_cols=11 Identities=18% Similarity=0.942 Sum_probs=8.9
Q ss_pred cccccccCCCC
Q 043301 34 ICDICETSLQG 44 (244)
Q Consensus 34 ~C~~C~~~i~g 44 (244)
.|..|+..|.+
T Consensus 10 ~C~~C~~~I~~ 20 (123)
T 2l3k_A 10 LCASCDKRIRA 20 (123)
T ss_dssp CCSSSSCCCCT
T ss_pred cccCCCCeecC
Confidence 78999888863
No 229
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=21.16 E-value=32 Score=20.47 Aligned_cols=14 Identities=29% Similarity=0.783 Sum_probs=10.4
Q ss_pred CCcEEeCCCCCccc
Q 043301 44 GPAYGCGTCEFSIH 57 (244)
Q Consensus 44 g~~Y~C~~C~F~lH 57 (244)
..+|.|..|+.++-
T Consensus 4 ~~fY~C~~CGnive 17 (36)
T 1dxg_A 4 GDVYKCELCGQVVK 17 (36)
T ss_dssp TCEEECTTTCCEEE
T ss_pred ccEEEcCCCCcEEE
Confidence 35799999986654
No 230
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=21.12 E-value=82 Score=21.68 Aligned_cols=28 Identities=21% Similarity=0.515 Sum_probs=16.7
Q ss_pred ccccccccccCCCCCcEEeCCCCCcccccc
Q 043301 31 VVIICDICETSLQGPAYGCGTCEFSIHKSC 60 (244)
Q Consensus 31 ~~~~C~~C~~~i~g~~Y~C~~C~F~lH~~C 60 (244)
....|..|+..|.+.... .-+-..|..|
T Consensus 24 ~~~~C~~C~~~I~~~~~~--a~~~~~H~~C 51 (89)
T 1x64_A 24 RMPLCDKCGSGIVGAVVK--ARDKYRHPEC 51 (89)
T ss_dssp SCCBCTTTCCBCCSCCEE--SSSCEECTTT
T ss_pred cCCCcccCCCEecccEEE--ECCceECccC
Confidence 346799999998763322 2234455555
No 231
>1wih_A Mitochondrial ribosome recycling factor; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.67.3.1
Probab=20.59 E-value=31 Score=24.83 Aligned_cols=12 Identities=8% Similarity=0.182 Sum_probs=9.5
Q ss_pred ceeEEEEeccCc
Q 043301 227 KNMSVEFWDLDD 238 (244)
Q Consensus 227 ~~~~~~~~~~~~ 238 (244)
|-|.|.+||||-
T Consensus 34 r~l~I~p~D~~~ 45 (84)
T 1wih_A 34 QVILVNMASFPE 45 (84)
T ss_dssp TEEEEECTTCTT
T ss_pred CEEEEEecccHH
Confidence 347899999984
No 232
>3pkz_A Recombinase SIN; small serine recombinase, resolvase, DNA, recombination; 1.80A {Staphylococcus aureus}
Probab=20.57 E-value=28 Score=25.92 Aligned_cols=25 Identities=8% Similarity=-0.102 Sum_probs=18.8
Q ss_pred hhhhhhcCCCCccceeEEEEeccCcccccC
Q 043301 214 AQFILRLQNSLRSKNMSVEFWDLDDVLVNV 243 (244)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (244)
...+-.++++| .|-||++||.+||+
T Consensus 47 ~~ll~~~~~gd-----~lvv~~ldRl~R~~ 71 (124)
T 3pkz_A 47 QKALNFVEMGD-----RFIVESIDRLGRNY 71 (124)
T ss_dssp HHHHHHCCTTC-----EEEESSHHHHCSCH
T ss_pred HHHHHHHHCCC-----EEEEeecccccCCH
Confidence 34555677773 57799999999985
No 233
>1fre_A Nuclear factor XNF7; zinc-binding protein, BBOX, development, MID-blastula- transition; NMR {Xenopus laevis} SCOP: g.43.1.1
Probab=20.51 E-value=56 Score=19.28 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=21.7
Q ss_pred cccCCCCeeEEcCCccceeccccccCcCccccCccccCCcC
Q 043301 89 CLDECSGMAYRCHECCYNLHYHCTALKPSINFKELKCVLHE 129 (244)
Q Consensus 89 Cg~~~~g~~Y~C~~Cd~~lH~~Ca~~p~~i~~~~~~h~~H~ 129 (244)
|+.-.....|.|..+..-++..|.... .|..|.
T Consensus 6 C~~H~e~l~lfC~~d~~~iC~~C~~~~--------~H~~H~ 38 (42)
T 1fre_A 6 CSEHDERLKLYCKDDGTLSCVICRDSL--------KHASHN 38 (42)
T ss_dssp CCSSCSSCCCCCCSSSSSSCCTTSSCS--------SCTTCC
T ss_pred chhhCCeeeEEeCCCCeEEeccCCCCC--------CCCCCc
Confidence 444334456788888888888887544 566665
No 234
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=20.28 E-value=56 Score=20.58 Aligned_cols=10 Identities=20% Similarity=0.836 Sum_probs=5.3
Q ss_pred cccccccccc
Q 043301 31 VVIICDICET 40 (244)
Q Consensus 31 ~~~~C~~C~~ 40 (244)
.++.|..|+.
T Consensus 13 k~~~C~~C~k 22 (62)
T 1vd4_A 13 ASFKCPVCSS 22 (62)
T ss_dssp SEEECSSSCC
T ss_pred CCccCCCCCc
Confidence 3455655554
No 235
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.11 E-value=56 Score=20.95 Aligned_cols=25 Identities=24% Similarity=0.826 Sum_probs=18.9
Q ss_pred cccccccccCC----CCCcEEeCCCCCcc
Q 043301 32 VIICDICETSL----QGPAYGCGTCEFSI 56 (244)
Q Consensus 32 ~~~C~~C~~~i----~g~~Y~C~~C~F~l 56 (244)
..+|..||..+ .+..+.|..|+|..
T Consensus 19 ~k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 19 NKFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp SEECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred cccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 46799998754 34689999999854
Done!