Your job contains 1 sequence.
>043303
MRTRFLNTDYFTTSSSSTPIETLNFLSLPIPHVSQSLLSVGKDDHLRFDSVLDVSLDIDQ
LPIHSALSKFFFDVIPQAIDVDFHDFEDLRFPISIVGGDEKESDIIDEEKEEESKRTSRL
EALEVEPPKKDNETAMDDQNTHNFEVIQFETPEPAMFLENGSLYEKEEIWIVSEVPEIDN
NLDMLTPGLAIQYLNEVRESVYSFDVVAFDYHVEQEASNLEDDGSFPDQMLCQSYMFPLL
EVDEISRGTLEIPSTEDELLSILKKQELQHWTQKDNMLISSKEILGSLEYDILDVLLDHS
SSKQCLESEMASQDMFHEMDFIGMVETSQLQENSKFHQLMEDSDCLLSMSPVIFEEFEIS
NVDLSKLFEVFFSTQAPSEPVACAWMFREDMNFKNFNELIIIQELALIDDTFKSLPTPVF
SEKIRSVYAVVEEKLADLKPQPLSASDGIYLDWHLLDGDECSHKFFCYDQKILQEIDLHN
IDFDLESSDDDKLVSTFIFSDNALSGPNMEGCEESLNTDFLGISGLYGHVMGVSSGKLFE
NGSPKPGNAEQSSERNAERVSLFFKSTSQFNDLDFFLNPQKPITGENCEFAVKEFDALSP
SSNSMGAGLSSDVFQQWDVTLYKVKLSDDILALIDIFKKSYLAIVHNETELSSFVTSDDF
KLLSLPKQRLMDCINRKRFQKANSHGDGNCMALITLCSIKLMAWYTCFYGIHTARLCVDK
LCKSQGCLKSRLGSLQSLVVAADGKIDKETSSHPSLLVIQGILQSNSSQSNLKVLIVAEQ
SFWWSLKCLVMSMGLSCSELQNFYTHVDQPDVTKVYGSASAKMTDLPISDCLMVSHESVS
ASFPFKKFSLILEYGGSHGSSRISALSPKVAGLPHLHFLKVELDDSSASRALCEGLDVPE
NMEVELLDLLPVEDGYHMGSGEAADTIEACCMPPSVPCSQLAIESEQIQPRMMSYPVTVI
VVNTQNVDKEMIVSRRSTYQKILALEKEGVQVVERDSDLPVDIIISTATCLVWYDYRNIG
KKATALDEASSCLPLCVENIATNVLTLLSFTFSVCIMVFEGDTNFICTVMESSDGLYAAA
ASLGLDLQLFCSNSSELTDEIIVSCIGNSIKLTSGLYPKMPESETLAESFLTKFPSVNPL
TAHAMLSSKGMLLELLECRHEQRIIAVKKYHVPEESTNLFSILCQSGEHEDSKSIMTDCS
SSVSSGLDSDKSHLNSDSGRTQQKSIYNPDKIDILMNDFLQFEPLNQVTDGLLNPSKVFK
LYDSWKDHEIFDDYQKPGSSVNELSGKKQELDFDMMMKASRVSKAYNSQIFECPRILEEI
NDPKFSWKDSLLGQNQGLGSAGMNNFDCHNISKTSCLQEDFIGEVVDLTSSPLSGKEFFS
VPKSSSLSASVPQMENNSLMKSKIARRLSFGKNGLLHFPTAAELNSGSDIVDSGKVQRQS
TQGTTDHPDAENNNDKLLLEHRKNLLDQVFVQRFAGSRGVPFQEEISHYNGTPLSKAIRS
ANPQPGSPWTVEFLNRIKEKSRLRQQSLPADTAAPCLGISGNLSKVTKRRSPSILEFFKY
QGGSTPGKLPEKKKQKRSVNSSTLSENKMPSTSFLPTWTPVDKRSRQTLSFALNESGNQT
KLVWNDGNSQSMRKKLRNQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043303
(1639 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156642 - symbol:SHOC1 "AT5G52290" species:370... 2029 2.9e-229 2
>TAIR|locus:2156642 [details] [associations]
symbol:SHOC1 "AT5G52290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506 EMBL:CP002688
GO:GO:0000712 IPI:IPI00915140 RefSeq:NP_200042.4 UniGene:At.29624
PRIDE:F4KG50 EnsemblPlants:AT5G52290.1 GeneID:835305
KEGG:ath:AT5G52290 OMA:WSHERRI ArrayExpress:F4KG50 Uniprot:F4KG50
Length = 1594
Score = 2029 (719.3 bits), Expect = 2.9e-229, Sum P(2) = 2.9e-229
Identities = 502/1236 (40%), Positives = 714/1236 (57%)
Query: 129 KKDNETAMDDQNTHNFEVIQFETPEPAMFLENGSLYEKEE-IWIVSEVPEIDNN-LDMLT 186
+KD+ A+ D+ T ++I+ ETPE +EN L E+ + SEV EI N+ +
Sbjct: 100 EKDDGDAIADKATP--KIIELETPELDFEMENKLLCTSEDHLQCFSEVLEIKNDPVKYEG 157
Query: 187 PGLAIQYLNEVRESVYSFDVVAFDYHVEQEASNLEDDGSFPDQMLCQSYMFPLLEVDEIS 246
+ +Q +++E +YS D + DY E S E++ Q + FPLLEVDE++
Sbjct: 158 SDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFRKIQPWFKDARFPLLEVDEVN 217
Query: 247 RGTLEIPSTEDELLSILKKQELQHWTQKDNMLISSKEILGSLEYDILDVLLDHSSSKQCL 306
L S D++ ++L+ E Q +++I+SKE++GS +YD+LDVL +
Sbjct: 218 LSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIGSKDYDLLDVLSTDCYLNKSG 277
Query: 307 ESEMASQDMFHEMDFIGMVETSQLQENSKFHQLMEDSDCLLSMSPVIFEEFEISNVDLSK 366
+S++ +D F EMD + ++E S +E F + PV +EEF+I +VD+S
Sbjct: 278 QSDVVPEDEFSEMDIVTILEISNAEE---FQGKVA--------VPVTYEEFQILDVDISD 326
Query: 367 LFEVFFSTQAPSEPVACAWMFREDMNFKNFNELIIIQELALIDDTFKSLPTPVFS--EKI 424
+F++F Q EP C MF ++MNFK+F+EL++ ELA DD FKSLPTP+ E
Sbjct: 327 VFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDDAFKSLPTPILHDYEMT 386
Query: 425 RSVYAVVEEKLADLKPQPLSASDGIYLDWHLLDGDECSHKFFCYDQKILQEIDLHNIDFD 484
RS+ + E+ L+ +KPQ LSAS+ IYL W+LL+ E +H Y +EI NID++
Sbjct: 387 RSLELIYEDVLSKIKPQSLSASNDIYLPWNLLE--ERNHNHCDYP---FEEIVTFNIDYN 441
Query: 485 LESSDDDKLVSTFIFSDNALSGPNMEGCEESLNTDFLGISGLYGHVMGVSSGKLFENGSP 544
E+S+ DK V FIFS++A P +E C E F GIS L H +S L EN
Sbjct: 442 WEASEGDKWVYDFIFSEDAFCEPLVEKCTEP----FYGISNLDEHAPVNTSHGLLENPFQ 497
Query: 545 KPGNAEQSSERNAERVSLFFKSTSQFNDLDFFLNPQKPITGENCEF---AVKEFDALSPS 601
K G + + + NA++ +L FKS S F+DL FF++P+K + +N E A K + S
Sbjct: 498 KTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNLESRVEAAKTTNHKCMS 557
Query: 602 SNSMGAGLSSDVF---QQWDVTLYKVKLSDDILALIDIFKKSYLAIVHNETELSSFVTSD 658
+S + S + + ++ L+ V+ S++I AL+ F KSYL +V +E+E S D
Sbjct: 558 IDSKASCRSGGMHPNPKTEEMILHSVRPSENIQALVGEFVKSYLTLVKDESENLS---ED 614
Query: 659 DFKLLSLPKQRLMDCINRKRFQKANSHGDGNCMALITLCSIKLMAWYTCFYGIHTARLCV 718
KLLS+ K +L+DCI + K D L +IK M WY CF+GIH A + +
Sbjct: 615 KLKLLSISKGKLIDCIRKANVHKTQL-ADDKTFTFALLLAIKQMTWYMCFFGIHVAYIYL 673
Query: 719 DKLCKSQGCLKSRLGSLQSLVVAADGKIDKE--TSSHPSLLVIQGILQSNSSQSNLKVLI 776
+K+C+S +K L +L S V + K D+ T SHPSL VIQGILQS ++ N K L+
Sbjct: 674 NKVCRSSNPMKIGLHTLYS-AVETEHKSDETDITRSHPSLAVIQGILQSEFARGNSKALL 732
Query: 777 VAEQSFWWSLKCLVMSMGLSCSELQNFYTHVDQPDVTKVYGSASAKMTDLPISDCLMVSH 836
+AE+ FW SLK L+MSMGLS ++L + ++P+V + + ++ LPISDCL++S+
Sbjct: 733 LAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGNRPNVHE-----AIELGFLPISDCLIISY 787
Query: 837 ESVSASFPFKKFSLILEYGGSHGSSRISALSPKVAGLPHLHFLKVELDDSSASRALCEGL 896
E +S SFP + FS+I+EYGG + S R S S K+ P HF+KVELD SA LC G+
Sbjct: 788 EQISPSFPVENFSVIVEYGGPNASPRYSFPS-KLDSFPSFHFIKVELDMPSACGQLCAGV 846
Query: 897 DVPENMXXXXXXXXXXXXGY--------------HMGSGEAADTIEACCMPPSVPCSQLA 942
VP ++ G+ + GS E + E MP +
Sbjct: 847 TVPYSLKMIKGDEVETKTGWLEEVLNFVPLEKVCYAGSSETTNESEFISMPQESERKRGI 906
Query: 943 IESEQIQPRMMSYPVTVIVVNTQNVDKEMIVSRRSTYQKILALEKEGVQVVERDSDLPVD 1002
IE R +VIVVNT+ VDKEMI+SRRSTYQK+LA+EKEGVQVVERDSDLPVD
Sbjct: 907 IEQGLSDQR------SVIVVNTKTVDKEMIISRRSTYQKVLAMEKEGVQVVERDSDLPVD 960
Query: 1003 IIISTATCLVWYDYRNIGKKATALDEASSCLPLCVENIATNVLTLLSFTFSVCIMVFEGD 1062
+++S A CL+WYD + KK+ A SS + +IATNVLT LSF+FS CIMVFEG+
Sbjct: 961 LMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGDIATNVLTSLSFSFSTCIMVFEGE 1020
Query: 1063 TNFICTVMESSDGLYAAAASLGLDLQLFCSNSSELTDEIIVSCIGNSIKLTSGLYPKMPE 1122
F+ VM+SSD LYAAA SLG+ LQ+FCS+S+ LTDEII+ CI +S+KL S L+ KMPE
Sbjct: 1021 PAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTDEIILKCIKSSVKL-SKLHVKMPE 1079
Query: 1123 SETLAESFLTKFPSVNPLTAHAMLSSKGMLLELLECRHEQRIIAVKKYHVPEESTNLFSI 1182
SE+LAESFLTKFPSVNPLTA +LSS G LLE ++ H+ ++ +KYHVPEES +LFS
Sbjct: 1080 SESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKLPHKSKVERTQKYHVPEESVDLFSS 1139
Query: 1183 LCQSGEHEDSKSIMTXXXXXXXXXXXXXXXHLNSDSGRTQQKSIYNPDKIDILMNDFLQF 1242
+C+ G EDS+S+MT H++ SG +++ I D+ID M+D + F
Sbjct: 1140 VCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHSGSKKKQYIAEKDEID--MDDLVHF 1197
Query: 1243 EPLNQVTDGLLNPSKVFKLYDSW--KDHEIFDDYQKPGSSVNELSGKKQELDFDMMMKAS 1300
P + D L S F+L DSW KDHEIF + P V E S D K S
Sbjct: 1198 SPSIEFADTQLKSSGDFQLDDSWSSKDHEIF--HFDP---VTEFS--------DAPFKPS 1244
Query: 1301 RVSKAYNSQIFECPRILEEINDPKFSWKDSLLGQNQ 1336
+S +S + P ++ + P S KD+ ++Q
Sbjct: 1245 GISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEKDQ 1280
Score = 1326 (471.8 bits), Expect = 6.3e-155, Sum P(2) = 6.3e-155
Identities = 325/733 (44%), Positives = 434/733 (59%)
Query: 917 HMGSGEAADTIEACCMPPSVPCSQLAIESEQIQPRMMSYPVTVIVVNTQNVDKEMIVSRR 976
+ GS E + E MP + IE R +VIVVNT+ VDKEMI+SRR
Sbjct: 881 YAGSSETTNESEFISMPQESERKRGIIEQGLSDQR------SVIVVNTKTVDKEMIISRR 934
Query: 977 STYQKILALEKEGVQVVERDSDLPVDIIISTATCLVWYDYRNIGKKATALDEASSCLPLC 1036
STYQK+LA+EKEGVQVVERDSDLPVD+++S A CL+WYD + KK+ A SS
Sbjct: 935 STYQKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSW 994
Query: 1037 VENIATNVLTLLSFTFSVCIMVFEGDTNFICTVMESSDGLYAAAASLGLDLQLFCSNSSE 1096
+ +IATNVLT LSF+FS CIMVFEG+ F+ VM+SSD LYAAA SLG+ LQ+FCS+S+
Sbjct: 995 IGDIATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSAN 1054
Query: 1097 LTDEIIVSCIGNSIKLTSGLYPKMPESETLAESFLTKFPSVNPLTAHAMLSSKGMLLELL 1156
LTDEII+ CI +S+KL S L+ KMPESE+LAESFLTKFPSVNPLTA +LSS G LLE +
Sbjct: 1055 LTDEIILKCIKSSVKL-SKLHVKMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFM 1113
Query: 1157 ECRHEQRIIAVKKYHVPEESTNLFSILCQSGEHEDSKSIMTXXXXXXXXXXXXXXXHLNS 1216
+ H+ ++ +KYHVPEES +LFS +C+ G EDS+S+MT H++
Sbjct: 1114 KLPHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSV 1173
Query: 1217 DSGRTQQKSIYNPDKIDILMNDFLQFEPLNQVTDGLLNPSKVFKLYDSW--KDHEIF--- 1271
SG +++ I D+ID M+D + F P + D L S F+L DSW KDHEIF
Sbjct: 1174 HSGSKKKQYIAEKDEID--MDDLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEIFHFD 1231
Query: 1272 ------DDYQKPG--SSVNELSGKKQELDFDMMMKASRVSK----AYNSQIFECPRILE- 1318
D KP S N+ K FD SK + F L
Sbjct: 1232 PVTEFSDAPFKPSGISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEKDQPDFSVEDSLPG 1291
Query: 1319 --EINDPKFSWKDSLLGQNQGLGSAGMNNFDCHNISKTSCLQEDFIGEVVDLTSSPLSGK 1376
E+ D F KD + QN+G M +F+ H+ + D+ GEV+D L +
Sbjct: 1292 IPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKGEVIDRADKYLE-E 1350
Query: 1377 EFFXXXXXXXXXXXXXQMENNSL-MKSKIARRLSFGKNGLLHFPTAAELNSGSDIVDSGK 1435
+F + L KSK +R+LSF + +FP AA+++S S+ + K
Sbjct: 1351 DFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAADIDSSSERYATEK 1410
Query: 1436 VQRQSTQGTTDHPDAENNNDKLLLEHRKNLLDQVFVQRFA-GSRGVPFQEEISHYNGTPL 1494
+ T+ A+N K ++ LL++V +R A + +PF+EEISH+ G+PL
Sbjct: 1411 DSKYDNN-TSLRGYADNYPAK----RQRTLLEEVLTRRSAVPTTELPFREEISHFGGSPL 1465
Query: 1495 SKAIRSANPQPGSPWTVEFLNRIKEKSRLR--QQSLPADTAAPCLGISGNLSKV-TKRRS 1551
S AIRS+N SPWTV+FLNR++E+SR R QQSLP+ + P L GN+ K TKR+S
Sbjct: 1466 SNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSYASPPSLETPGNIKKANTKRKS 1525
Query: 1552 PSILEFFKYQGGSTPGKLPEKKKQKRSVNSSTLSENKMPSTSFLPTWTPVDKRSRQTLSF 1611
PSILEFFKY+GG+ KL E+K+QKRS NSS +N+ S L + TP+DKR++Q+LS+
Sbjct: 1526 PSILEFFKYKGGN---KLQEEKRQKRSKNSSASPKNER-FYSPLKSCTPIDKRAKQSLSY 1581
Query: 1612 ALNESGNQTKLVW 1624
N +G QTKLVW
Sbjct: 1582 TANGTG-QTKLVW 1593
Score = 206 (77.6 bits), Expect = 2.9e-229, Sum P(2) = 2.9e-229
Identities = 44/88 (50%), Positives = 58/88 (65%)
Query: 1 MRTRFLNTDYFTTSSSSTPIETLNFLSLPIP-HVSQSLLSVGKDDHLRFDSVLDVSLDID 59
MRTRFLN DYF+T S ETL FL+LP P + ++ G++D LRF S+ +VS+ I
Sbjct: 1 MRTRFLNIDYFSTPPSHV-FETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIG 59
Query: 60 QLPIHSALSKFFFDVIPQAIDVDFHDFE 87
LPI +ALSKF DV+P + VD+ FE
Sbjct: 60 NLPIEAALSKFLSDVVPDRVSVDYRVFE 87
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1639 1582 0.00081 125 3 11 22 0.41 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 630 (67 KB)
Total size of DFA: 649 KB (2285 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 142.22u 0.16s 142.38t Elapsed: 00:00:08
Total cpu time: 142.22u 0.16s 142.38t Elapsed: 00:00:08
Start: Thu May 9 19:29:30 2013 End: Thu May 9 19:29:38 2013